Your job contains 1 sequence.
>psy7773
TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV
LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG
ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK
FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI
FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE
ERILAAARYKLNMDEKEYHRNNTARTQKLNKAIINYHINAEKEQKKEQERIEKERMRRLM
AEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKEHKEEQQKKMREEKKKKKKSIK
QKILDGNMDKLDLDESSQLEDLRITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWEVVM
EDSEDEGSEDEEMKEKKEEPSKAVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASI
MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV
IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKS
VLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFL
LPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQL
PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNH
PFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQL
MTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAA
DTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKV
IQAGMFDQKSTGSERHEFLQTILHQDDEEEEENEVPDDETVNQLIARTEDELTLFQKMDA
ERRKGETKPRLVEIKELPDWMVKDDDEVENSMYEEEREREKEEALMGRGSRQRKQVDYTD
SLTDQEWLKAIEDDGADDYEEEEEEVKPVTKKRGSGKKGKKSYVEETAPEDEEEEKPVKK
RRRRKKVQISDEDEDEEDESPKKKKRKSTKTPAKDKHKEDDEEKHVVSKRKKKVVEEEEE
VEEAEGEEEEEDDKASKPRKS
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7773
(1281 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop... 2759 2.4e-289 2
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,... 2376 2.0e-278 4
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat... 2382 4.6e-276 3
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein... 2393 5.3e-275 3
UNIPROTKB|P51532 - symbol:SMARCA4 "Transcription activato... 2160 6.2e-275 4
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 2390 8.6e-275 3
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc... 2390 8.6e-275 3
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a... 2390 8.6e-275 3
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci... 2390 8.6e-275 3
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci... 2390 8.6e-275 3
UNIPROTKB|A7Z019 - symbol:SMARCA4 "Transcription activato... 2377 1.1e-274 3
UNIPROTKB|E2RJ89 - symbol:SMARCA4 "Uncharacterized protei... 2377 1.1e-274 3
UNIPROTKB|Q9HBD4 - symbol:SMARCA4 "SMARCA4 isoform 2" spe... 2160 2.1e-274 4
MGI|MGI:88192 - symbol:Smarca4 "SWI/SNF related, matrix a... 2377 2.3e-274 3
RGD|621728 - symbol:Smarca4 "SWI/SNF related, matrix asso... 2377 2.3e-274 3
UNIPROTKB|G3V790 - symbol:Smarca4 "SWI/SNF related, matri... 2377 2.3e-274 3
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato... 2160 7.0e-274 4
UNIPROTKB|F1M6Y4 - symbol:Smarca4 "Transcription activato... 2370 1.3e-273 3
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass... 2379 2.0e-273 3
UNIPROTKB|F1MJ46 - symbol:SMARCA4 "Transcription activato... 2351 6.1e-272 3
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 2390 1.8e-271 2
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 2390 1.8e-271 2
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 2390 1.9e-268 3
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p... 2160 5.7e-246 2
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p... 2323 5.1e-241 1
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 2054 3.1e-236 3
WB|WBGene00016868 - symbol:C52B9.8 species:6239 "Caenorha... 1981 1.8e-218 2
ASPGD|ASPL0000042729 - symbol:AN2278 species:162425 "Emer... 1900 2.1e-204 2
POMBASE|SPCC1620.14c - symbol:snf22 "ATP-dependent DNA he... 1855 3.0e-203 2
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 1850 5.0e-203 2
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 1826 8.0e-202 3
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW... 1823 1.2e-197 2
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC... 1833 1.1e-196 2
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 1791 6.3e-192 2
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 1791 6.3e-192 2
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 1708 4.6e-182 2
DICTYBASE|DDB_G0285205 - symbol:snf2a "SNF2-related prote... 1486 2.5e-163 3
TAIR|locus:2062840 - symbol:SYD "SPLAYED" species:3702 "A... 1467 8.3e-155 4
GENEDB_PFALCIPARUM|PFB0730w - symbol:PFB0730w "DNA helica... 860 1.1e-120 3
UNIPROTKB|O96239 - symbol:PFB0730w "DEAD/DEAH box helicas... 860 1.1e-120 3
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 1162 4.6e-120 2
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 1162 4.6e-120 2
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 1162 4.6e-120 2
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 1161 5.9e-120 2
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 1161 5.9e-120 2
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass... 1153 4.1e-119 2
CGD|CAL0005422 - symbol:ISW2 species:5476 "Candida albica... 1155 3.0e-117 1
UNIPROTKB|Q5A310 - symbol:ISW2 "Putative uncharacterized ... 1155 3.0e-117 1
TAIR|locus:2062999 - symbol:BRM "AT2G46020" species:3702 ... 1094 5.2e-113 3
CGD|CAL0001390 - symbol:orf19.3035 species:5476 "Candida ... 1040 1.7e-109 3
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 1059 4.4e-107 1
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei... 1019 5.8e-105 2
UNIPROTKB|F1NVT7 - symbol:CHD6 "Uncharacterized protein" ... 949 3.0e-104 4
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 997 4.6e-103 2
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"... 601 1.0e-101 2
ZFIN|ZDB-GENE-070912-179 - symbol:chd7 "chromodomain heli... 998 4.3e-101 3
UNIPROTKB|F6XTU7 - symbol:SMARCA1 "Uncharacterized protei... 981 5.9e-101 2
CGD|CAL0000801 - symbol:orf19.1720 species:5476 "Candida ... 645 6.7e-101 2
UNIPROTKB|Q5AJ72 - symbol:CaO19.1720 "Putative uncharacte... 645 6.7e-101 2
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 997 1.3e-100 3
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 596 1.6e-100 2
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2... 956 2.0e-100 2
UNIPROTKB|Q9P2D1 - symbol:CHD7 "Chromodomain-helicase-DNA... 1001 3.2e-100 2
UNIPROTKB|F1NSG3 - symbol:CHD7 "Chromodomain-helicase-DNA... 997 3.2e-100 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 959 4.1e-100 2
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 1000 5.2e-100 2
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 607 7.3e-100 2
MGI|MGI:1924001 - symbol:Chd9 "chromodomain helicase DNA ... 964 8.1e-100 4
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 1001 8.3e-100 2
RGD|1311921 - symbol:Chd7 "chromodomain helicase DNA bind... 996 8.4e-100 2
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 601 9.5e-100 2
UNIPROTKB|F1NLW6 - symbol:CHD6 "Uncharacterized protein" ... 949 1.1e-99 4
UNIPROTKB|F1NLV5 - symbol:CHD6 "Uncharacterized protein" ... 949 1.1e-99 4
UNIPROTKB|Q06A37 - symbol:CHD7 "Chromodomain-helicase-DNA... 997 1.1e-99 2
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA... 964 1.8e-99 2
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT... 690 2.4e-99 3
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 592 1.1e-98 2
ZFIN|ZDB-GENE-030131-6320 - symbol:chd8 "chromodomain hel... 956 1.2e-98 3
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 655 1.3e-98 4
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 663 1.4e-98 4
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 675 1.6e-98 3
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 698 3.0e-98 3
UNIPROTKB|H0YJG4 - symbol:CHD8 "Chromodomain-helicase-DNA... 955 3.3e-98 2
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 585 3.8e-98 2
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st... 680 3.8e-98 2
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 587 3.9e-98 2
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 654 5.5e-98 3
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 655 6.8e-98 4
UNIPROTKB|E1BDZ3 - symbol:CHD9 "Uncharacterized protein" ... 964 7.1e-98 3
UNIPROTKB|E2RDK8 - symbol:CHD9 "Uncharacterized protein" ... 964 7.1e-98 3
UNIPROTKB|Q3L8U1 - symbol:CHD9 "Chromodomain-helicase-DNA... 964 9.0e-98 3
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 655 9.0e-98 4
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 698 1.1e-97 3
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 698 1.1e-97 3
UNIPROTKB|F1RT88 - symbol:CHD7 "Uncharacterized protein" ... 978 1.1e-97 2
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 656 1.3e-97 4
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 655 1.4e-97 4
RGD|1594200 - symbol:LOC680231 "similar to chromodomain h... 964 1.4e-97 3
UNIPROTKB|B5DE69 - symbol:chd8 "Chromodomain-helicase-DNA... 968 2.2e-97 2
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 663 2.4e-97 3
WARNING: Descriptions of 471 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 2759 (976.3 bits), Expect = 2.4e-289, Sum P(2) = 2.4e-289
Identities = 555/864 (64%), Positives = 638/864 (73%)
Query: 306 AARYKLNMDEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEE 365
AA + D +E+HRNN A+ ++NKA++N+H NA LMAEDEE
Sbjct: 518 AAVLQHGKDLREFHRNNKAQLARMNKAVMNHHANAEREQKKEQERIEKERMRRLMAEDEE 577
Query: 366 GYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVXXXXXXXXXXXXXXXXXXXXXXXXXILD 425
GYRKLIDQKKDKRLAFLLSQTDEYISNLTQMV ++
Sbjct: 578 GYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKQHKDDQMKKKEEEGKRLIQFKKELLMS 637
Query: 426 GNMXXXXXXXXXXXXXXRITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXX 485
G R+ V E + KL G+DAP K + WL HPGW
Sbjct: 638 GEYIGIDEGSIVADM--RVHVVEQCTGKKLTGDDAPMLKHLHRWLNMHPGWDWIDDEEDS 695
Query: 486 XXXXXXXXXXXXXXPSK---AVGEKKT--EDDEYKDA------------GEEATYYSIAH 528
P+ A + + D++ KD EE TYYSIAH
Sbjct: 696 CGSNDDHKPKVEEQPTATEDATDKAQATGNDEDAKDLITKAKVEDDEYRTEEQTYYSIAH 755
Query: 529 TYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYL 588
T HEKV EQASIMVNG LKEYQIKGLEW+VSLYNNNLNGILADEMGLGKT+QTI+L+TYL
Sbjct: 756 TIHEKVVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYL 815
Query: 589 MEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVL 648
M++KK +GPYL+IVPLSTL NWVLEFEKWAP+ VV+YKGSP RR LQ +M+ +KFNVL
Sbjct: 816 MDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQMRATKFNVL 875
Query: 649 LTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQN 708
LTTYE++IKDK+VL+KIQWK MIIDEGHRMKNHHCKLTQ LNT Y + +R+LLTGTPLQN
Sbjct: 876 LTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQN 935
Query: 709 KLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
KLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL
Sbjct: 936 KLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 995
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRRLKKEVE QLP+KVEYIIKCDMS LQ++LY+H+ ++G+LLTDGSEKGK G+GGA+AL
Sbjct: 996 LRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALM 1055
Query: 829 NTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETK 888
NTIVQLRKLCNHPFMFQ+IEEKYC H G + VVSGPD+YR SGKFELLDRILPK K T
Sbjct: 1056 NTIVQLRKLCNHPFMFQHIEEKYCDHTGGHG-VVSGPDLYRVSGKFELLDRILPKLKATN 1114
Query: 889 HRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLST 948
HRVL+FCQMTQ MTI+EDY WR F YLRLDGTTK+EDRGELLRKFN S F+FLLST
Sbjct: 1115 HRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLST 1174
Query: 949 RAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILA 1008
RAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL+TVNSVEERILA
Sbjct: 1175 RAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILA 1234
Query: 1009 AARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXX-XXXTVNQLIAR 1067
AARYKLNMDEKVIQAGMFDQKSTGSER +FLQTILHQ +N +IAR
Sbjct: 1235 AARYKLNMDEKVIQAGMFDQKSTGSERQQFLQTILHQDDNEEEEENEVPDDEMINMMIAR 1294
Query: 1068 TEDELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVENSMYXXXXXXXXXXALMG 1127
+E+E+ +F++MDAER+K + + + + + + D ++ ++G
Sbjct: 1295 SEEEIEIFKRMDAERKKEDEEIHPGRERLIDESELPDWLTKDDDEVERFHYQYDEDTILG 1354
Query: 1128 RGSRQRKQVDYTDSLTDQEWLKAI 1151
RGSRQRK+VDYTDSLT++EWLKAI
Sbjct: 1355 RGSRQRKEVDYTDSLTEKEWLKAI 1378
Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
Identities = 271/316 (85%), Positives = 291/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV
Sbjct: 931 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 990
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE QLP+KVEYIIKCDMS LQ++LY+H+ ++G+LLTDGSEKGK G+GG
Sbjct: 991 LRPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGG 1050
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+AL NTIVQLRKLCNHPFMFQ+IEEKYC H G + VVSGPD+YR SGKFELLDRILPK
Sbjct: 1051 AKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHG-VVSGPDLYRVSGKFELLDRILPK 1109
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
K T HRVL+FCQMTQ MTI+EDY WR F YLRLDGTTK+EDRGELLRKFN S F+
Sbjct: 1110 LKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFV 1169
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ ADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL+TVNSVE
Sbjct: 1170 FLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVE 1229
Query: 301 ERILAAARYKLNMDEK 316
ERILAAARYKLNMDEK
Sbjct: 1230 ERILAAARYKLNMDEK 1245
Score = 44 (20.5 bits), Expect = 2.4e-289, Sum P(2) = 2.4e-289
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR-GILLTDGSE 112
R KKE E E++ ++ D G +KL+ Q R LL+ E
Sbjct: 554 REQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDE 600
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 2376 (841.5 bits), Expect = 2.0e-278, Sum P(4) = 2.0e-278
Identities = 453/653 (69%), Positives = 537/653 (82%)
Query: 507 KKTEDDEYKDAG---EEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY ++ +YY++AH EKV +Q+S++VNG+LK+YQIKGLEW+VSLYNN
Sbjct: 724 KQDVDDEYGNSAFIRGLQSYYAVAHAVTEKVEKQSSLLVNGQLKQYQIKGLEWLVSLYNN 783
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNWV EF+KWAPS
Sbjct: 784 NLNGILADEMGLGKTIQTIALITYLMEFKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVK 843
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
V+YKGSP ARRA +++ KFNVL+TTYE+IIKDK VL+K++WK MI+DEGHRMKNHHC
Sbjct: 844 VSYKGSPAARRAFLPILRSGKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHRMKNHHC 903
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + RVLLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 904 KLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 963
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
EKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+
Sbjct: 964 EKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHM 1023
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1024 QAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQ 1083
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1084 GSDLYRASGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTK 1143
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
+EDRG LL+ FN+P +YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAH
Sbjct: 1144 AEDRGMLLKNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAH 1203
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1204 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1263
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGETK-----PRLVEIKELP 1098
TVNQ+IAR+E+E F +MD +RR+ E + PRL+E ELP
Sbjct: 1264 EHEEQDEEEDEVPDDETVNQMIARSEEEFDHFMRMDLDRRREEARNPKRRPRLMEEDELP 1323
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQRK+VDY+DSLT+++WLKAI
Sbjct: 1324 TWIMKDDAEVER-----LTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAI 1371
Score = 1357 (482.7 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 250/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 924 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 983
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 984 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1043
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1044 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGSDLYRASGKFELLDRILPK 1103
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R+F YLRLDGTTK+EDRG LL+ FN+P +YFI
Sbjct: 1104 LRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKNFNDPSHQYFI 1163
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1164 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1223
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1224 EKILAAAKYKLNVDQK 1239
Score = 244 (91.0 bits), Expect = 2.0e-278, Sum P(4) = 2.0e-278
Identities = 49/84 (58%), Positives = 57/84 (67%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ TA+ QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 503 DFKEYHRSITAKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 562
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 563 KKDKRLAYLLQQTDEYVANLTELV 586
Score = 71 (30.1 bits), Expect = 2.0e-278, Sum P(4) = 2.0e-278
Identities = 28/110 (25%), Positives = 41/110 (37%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXXXXXXXXXXXX-XPSK 502
+ V +S L G DAP A Q+ WL +PG+ PS+
Sbjct: 635 VKVIHVDSGKILTGMDAPKAGQLDTWLEMNPGYEVAPRSDSEDSGSDEEEDDEEEPQPSQ 694
Query: 503 AVGEKKT--EDDEYKDAGEEATYYSIAHTYHEKVTEQA-SIMVNGKLKEY 549
A E+K D + +D E + I H + E S + G L+ Y
Sbjct: 695 APTEEKKVIPDPDSEDVSEVDARHIIEHAKQDVDDEYGNSAFIRG-LQSY 743
Score = 40 (19.1 bits), Expect = 2.0e-278, Sum P(4) = 2.0e-278
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1127 GRGSRQRKQVDYTDSLTDQE 1146
GR SR + V DS DQE
Sbjct: 1597 GRSSRPKPVVSDDDSEEDQE 1616
Score = 40 (19.1 bits), Expect = 6.7e-257, Sum P(4) = 6.7e-257
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 531 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 567
Score = 38 (18.4 bits), Expect = 1.1e-256, Sum P(4) = 1.1e-256
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 302 RILAAARYKLNMDEKEYHRNNTARTQKLNKAI 333
R + A KL YH N +K N+ I
Sbjct: 509 RSITAKMQKLTKAVATYHANTEREQKKENERI 540
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 2382 (843.6 bits), Expect = 4.6e-276, Sum P(3) = 4.6e-276
Identities = 453/653 (69%), Positives = 537/653 (82%)
Query: 507 KKTEDDEYKD-AGEEAT--YYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY AG+ ++ YY +AH E+V +Q++ ++NG LK+YQI+GLEWMVSLYNN
Sbjct: 684 KQDVDDEYSSQAGQTSSQSYYGVAHAVIERVDKQSTFLINGTLKQYQIQGLEWMVSLYNN 743
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTI L+TYLME K+ GPYL+IVPLSTLSNWV E +KWAPS
Sbjct: 744 NLNGILADEMGLGKTIQTIGLITYLMELKRLNGPYLIIVPLSTLSNWVYELDKWAPSIVK 803
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
+AYKG+P RR+L ++++ KFNVL+TTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 804 IAYKGTPSMRRSLVPQLRSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 863
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 864 KLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 923
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS +QK+LY+H+
Sbjct: 924 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHM 983
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QL+K+CNHP+MFQ+IEE + +H+G N ++S
Sbjct: 984 QGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIIS 1043
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
GPD+YR SGKFELLDRILPK K T HRVL+FCQMT LMTILEDYF +R+F YLRLDGTTK
Sbjct: 1044 GPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTK 1103
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNE S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1104 SEDRAMLLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1163
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1164 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1223
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR EDE LF +MD +RR+ + KPRL+E ELP
Sbjct: 1224 EHEEQNMEEDEVPDDETLNQMIARNEDEFELFMRMDLDRRREDARNPKRKPRLMEEDELP 1283
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSR R+ VDY+D+LT+++WL+AI
Sbjct: 1284 SWILKDDAEVER-----LTCEEEEEKIFGRGSRHRRDVDYSDALTEKQWLRAI 1331
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 258/316 (81%), Positives = 291/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 884 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 943
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS +QK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 944 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGG 1003
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QL+K+CNHP+MFQ+IEE + +H+G N ++SGPD+YR SGKFELLDRILPK
Sbjct: 1004 AKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIISGPDLYRASGKFELLDRILPK 1063
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
K T HRVL+FCQMT LMTILEDYF +R+F YLRLDGTTKSEDR LL+KFNE S+YFI
Sbjct: 1064 LKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGSQYFI 1123
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1124 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1183
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1184 EKILAAAKYKLNVDQK 1199
Score = 234 (87.4 bits), Expect = 4.6e-276, Sum P(3) = 4.6e-276
Identities = 47/84 (55%), Positives = 57/84 (67%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + + QKL+KAI +H N LMAEDEEGYRKLIDQ
Sbjct: 464 DFKEYHRSISGKIQKLSKAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 523
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 524 KKDKRLAYLLQQTDEYVANLTELV 547
Score = 79 (32.9 bits), Expect = 4.6e-276, Sum P(3) = 4.6e-276
Identities = 22/96 (22%), Positives = 37/96 (38%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXXXXXXXXXXXXXPSKA 503
+ V +T + L+G DAP + Q++ WL +PG+ S+A
Sbjct: 597 VKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSDFEEEDDEEVVSRA 656
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQAS 539
E+K D D E I + + V ++ S
Sbjct: 657 ESEEKKVIDPNSDEVSETAAKHIIESAKQDVDDEYS 692
Score = 43 (20.2 bits), Expect = 7.0e-256, Sum P(3) = 7.0e-256
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 492 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKR 528
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 2393 (847.4 bits), Expect = 5.3e-275, Sum P(3) = 5.3e-275
Identities = 453/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+S+++NG LK YQ++GLEWMVSLYNN
Sbjct: 656 KQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTLKHYQLQGLEWMVSLYNN 715
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 716 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 775
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 776 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 835
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 836 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 895
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 896 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 955
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 956 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1015
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1016 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1075
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH
Sbjct: 1076 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 1135
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1136 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1195
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1196 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1255
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1256 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1303
Score = 1386 (493.0 bits), Expect = 8.8e-145, Sum P(2) = 8.8e-145
Identities = 258/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 856 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 915
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 916 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 975
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 976 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1035
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1036 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1095
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1096 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1155
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1156 EKILAAAKYKLNVDQK 1171
Score = 227 (85.0 bits), Expect = 5.3e-275, Sum P(3) = 5.3e-275
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 434 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 493
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKD+RLA+LL QTDEY++NLT +V
Sbjct: 494 KKDRRLAYLLQQTDEYVANLTNLV 517
Score = 65 (27.9 bits), Expect = 5.3e-275, Sum P(3) = 5.3e-275
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V T + L G +AP A Q+ WL +PG+
Sbjct: 568 VKVTHTETGKVLLGPEAPKASQLDAWLEMNPGY 600
Score = 50 (22.7 bits), Expect = 8.8e-145, Sum P(2) = 8.8e-145
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 1071 ELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVEN 1110
++ L +K + R KG+ K R K P +V DDD E+
Sbjct: 1494 KIKLNKKDEKSREKGKGKKRQSRAKAKP--VVSDDDSDED 1531
Score = 43 (20.2 bits), Expect = 1.4e-255, Sum P(3) = 1.4e-255
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 462 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 498
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 2160 (765.4 bits), Expect = 6.2e-275, Sum P(4) = 6.2e-275
Identities = 406/544 (74%), Positives = 473/544 (86%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 711 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 770
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 771 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 830
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 831 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 890
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 891 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 950
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 951 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1010
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1011 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1070
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1191 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250
Query: 1043 L-HQ 1045
L H+
Sbjct: 1251 LEHE 1254
Score = 1359 (483.5 bits), Expect = 2.9e-161, Sum P(2) = 2.9e-161
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1212 EKILAAAKYKLNVDQK 1227
Score = 240 (89.5 bits), Expect = 6.2e-275, Sum P(4) = 6.2e-275
Identities = 48/84 (57%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 485 DFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 544
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELV 568
Score = 233 (87.1 bits), Expect = 6.2e-275, Sum P(4) = 6.2e-275
Identities = 50/97 (51%), Positives = 64/97 (65%)
Query: 1060 TVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELPDWMVKDDDEVENSMYX 1114
TVNQ+IAR E+E LF +MD +RR+ E KPRL+E ELP W++KDD EVE
Sbjct: 1301 TVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVER---- 1356
Query: 1115 XXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
+ GRGSR RK+VDY+DSLT+++WLKAI
Sbjct: 1357 -LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 1392
Score = 65 (27.9 bits), Expect = 6.2e-275, Sum P(4) = 6.2e-275
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 617 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 649
Score = 40 (19.1 bits), Expect = 7.7e-254, Sum P(4) = 7.7e-254
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 40 (19.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 806
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1572 GEESEEEEEGEEEGSESESRSV 1593
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 2390 (846.4 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 451/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 664 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 723
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 724 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 783
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 784 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 843
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 844 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 903
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 904 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 963
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 964 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1023
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1024 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1083
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1084 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1143
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1144 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1203
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1204 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1263
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1264 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1311
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 864 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 923
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 924 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 983
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 984 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1043
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1044 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1103
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1104 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1163
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1164 EKILAAAKYKLNVDQK 1179
Score = 227 (85.0 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 443 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 502
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKD+RLA+LL QTDEY++NLT +V
Sbjct: 503 KKDRRLAYLLQQTDEYVANLTNLV 526
Score = 66 (28.3 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 21/102 (20%), Positives = 36/102 (35%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXXXXXXXXXXXXXPSKA 503
+ V T + L G +AP A Q+ WL +PG+ S+
Sbjct: 577 VKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQ 636
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGK 545
E+K D + E I T + V ++ S+ + +
Sbjct: 637 ETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSAR 678
Score = 43 (20.2 bits), Expect = 2.4e-255, Sum P(3) = 2.4e-255
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 471 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 507
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 2390 (846.4 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 451/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 682 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 741
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 742 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 801
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 802 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 861
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 862 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 921
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 922 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 981
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 982 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1041
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1042 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1101
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1102 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1161
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1162 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1221
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1222 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1281
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1282 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1329
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 882 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 941
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 942 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 1001
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 1002 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1061
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1062 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1121
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1122 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1181
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1182 EKILAAAKYKLNVDQK 1197
Score = 227 (85.0 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 461 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 520
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKD+RLA+LL QTDEY++NLT +V
Sbjct: 521 KKDRRLAYLLQQTDEYVANLTNLV 544
Score = 66 (28.3 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 21/102 (20%), Positives = 36/102 (35%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXXXXXXXXXXXXXPSKA 503
+ V T + L G +AP A Q+ WL +PG+ S+
Sbjct: 595 VKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQ 654
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGK 545
E+K D + E I T + V ++ S+ + +
Sbjct: 655 ETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSAR 696
Score = 43 (20.2 bits), Expect = 2.4e-255, Sum P(3) = 2.4e-255
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 489 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 525
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 2390 (846.4 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 451/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 687 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 746
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 747 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 806
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 807 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 866
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 867 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 926
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 927 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 986
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 987 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1046
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1047 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1106
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1107 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1166
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1167 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1226
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1227 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1286
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1287 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1334
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 887 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 946
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 947 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 1006
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 1007 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1066
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1067 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1126
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1127 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1186
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1187 EKILAAAKYKLNVDQK 1202
Score = 227 (85.0 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 466 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 525
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKD+RLA+LL QTDEY++NLT +V
Sbjct: 526 KKDRRLAYLLQQTDEYVANLTNLV 549
Score = 66 (28.3 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 21/102 (20%), Positives = 36/102 (35%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXXXXXXXXXXXXXPSKA 503
+ V T + L G +AP A Q+ WL +PG+ S+
Sbjct: 600 VKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQ 659
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGK 545
E+K D + E I T + V ++ S+ + +
Sbjct: 660 ETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSAR 701
Score = 43 (20.2 bits), Expect = 2.4e-255, Sum P(3) = 2.4e-255
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 494 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 530
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 2390 (846.4 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 451/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 689 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 748
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 749 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 808
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 809 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 868
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 869 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 928
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 929 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 988
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 989 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1048
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1049 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1108
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1109 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1168
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1169 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1228
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1229 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1288
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1289 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1336
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 889 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 948
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 949 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 1008
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 1009 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1068
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1069 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1128
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1129 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1188
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1189 EKILAAAKYKLNVDQK 1204
Score = 227 (85.0 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 468 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 527
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKD+RLA+LL QTDEY++NLT +V
Sbjct: 528 KKDRRLAYLLQQTDEYVANLTNLV 551
Score = 66 (28.3 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 21/102 (20%), Positives = 36/102 (35%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXXXXXXXXXXXXXPSKA 503
+ V T + L G +AP A Q+ WL +PG+ S+
Sbjct: 602 VKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQ 661
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGK 545
E+K D + E I T + V ++ S+ + +
Sbjct: 662 ETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSAR 703
Score = 43 (20.2 bits), Expect = 2.4e-255, Sum P(3) = 2.4e-255
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 496 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 532
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 2390 (846.4 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 451/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 689 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 748
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 749 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 808
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 809 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 868
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 869 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 928
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 929 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 988
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 989 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1048
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1049 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1108
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1109 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1168
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1169 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1228
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1229 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1288
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1289 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1336
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 889 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 948
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 949 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 1008
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 1009 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1068
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1069 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1128
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1129 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1188
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1189 EKILAAAKYKLNVDQK 1204
Score = 227 (85.0 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 468 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 527
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKD+RLA+LL QTDEY++NLT +V
Sbjct: 528 KKDRRLAYLLQQTDEYVANLTNLV 551
Score = 66 (28.3 bits), Expect = 8.6e-275, Sum P(3) = 8.6e-275
Identities = 21/102 (20%), Positives = 36/102 (35%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXXXXXXXXXXXXXPSKA 503
+ V T + L G +AP A Q+ WL +PG+ S+
Sbjct: 602 VKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQ 661
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGK 545
E+K D + E I T + V ++ S+ + +
Sbjct: 662 ETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSAR 703
Score = 43 (20.2 bits), Expect = 2.4e-255, Sum P(3) = 2.4e-255
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 496 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 532
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 2377 (841.8 bits), Expect = 1.1e-274, Sum P(3) = 1.1e-274
Identities = 455/654 (69%), Positives = 535/654 (81%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 703 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 762
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 763 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 822
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 823 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 882
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 883 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 942
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 943 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1002
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1003 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1062
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1063 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1122
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1123 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1182
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1183 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1242
Query: 1043 LHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKEL 1097
L TVNQ+IAR E+E LF +MD +RR+ E KPRL+E EL
Sbjct: 1243 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1302
Query: 1098 PDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
P W++KDD EVE + GRGSR RK+VDY+DSLT+++WLKAI
Sbjct: 1303 PSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 1351
Score = 1359 (483.5 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 904 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 963
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 964 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1023
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1024 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1083
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 1084 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1143
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1144 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1203
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1204 EKILAAAKYKLNVDQK 1219
Score = 240 (89.5 bits), Expect = 1.1e-274, Sum P(3) = 1.1e-274
Identities = 48/84 (57%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 477 DFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 536
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 537 KKDKRLAYLLQQTDEYVANLTELV 560
Score = 65 (27.9 bits), Expect = 1.1e-274, Sum P(3) = 1.1e-274
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 609 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 641
Score = 40 (19.1 bits), Expect = 1.5e-253, Sum P(3) = 1.5e-253
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 505 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 541
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1531 GEESEEEEEGEEEGSESESRSV 1552
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 2377 (841.8 bits), Expect = 1.1e-274, Sum P(3) = 1.1e-274
Identities = 455/654 (69%), Positives = 535/654 (81%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 711 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 770
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 771 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 830
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 831 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 890
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 891 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 950
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 951 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1010
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1011 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1070
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1191 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250
Query: 1043 LHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKEL 1097
L TVNQ+IAR E+E LF +MD +RR+ E KPRL+E EL
Sbjct: 1251 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1310
Query: 1098 PDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
P W++KDD EVE + GRGSR RK+VDY+DSLT+++WLKAI
Sbjct: 1311 PSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 1359
Score = 1359 (483.5 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1212 EKILAAAKYKLNVDQK 1227
Score = 240 (89.5 bits), Expect = 1.1e-274, Sum P(3) = 1.1e-274
Identities = 48/84 (57%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 485 DFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 544
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELV 568
Score = 65 (27.9 bits), Expect = 1.1e-274, Sum P(3) = 1.1e-274
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 617 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 649
Score = 40 (19.1 bits), Expect = 1.5e-253, Sum P(3) = 1.5e-253
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1539 GEESEEEEEGEEEGSESESRSV 1560
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 2160 (765.4 bits), Expect = 2.1e-274, Sum P(4) = 2.1e-274
Identities = 406/544 (74%), Positives = 473/544 (86%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 711 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 770
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 771 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 830
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 831 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 890
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 891 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 950
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 951 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1010
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1011 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1070
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1191 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250
Query: 1043 L-HQ 1045
L H+
Sbjct: 1251 LEHE 1254
Score = 1359 (483.5 bits), Expect = 9.6e-161, Sum P(2) = 9.6e-161
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1212 EKILAAAKYKLNVDQK 1227
Score = 240 (89.5 bits), Expect = 2.1e-274, Sum P(4) = 2.1e-274
Identities = 48/84 (57%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 485 DFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 544
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELV 568
Score = 228 (85.3 bits), Expect = 2.1e-274, Sum P(4) = 2.1e-274
Identities = 49/97 (50%), Positives = 63/97 (64%)
Query: 1060 TVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELPDWMVKDDDEVENSMYX 1114
TVNQ+IAR E+E LF +MD +RR+ E KPRL+E ELP W++KDD EVE
Sbjct: 1301 TVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVER---- 1356
Query: 1115 XXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
+ GRGSR RK+VDY+DSLT+++WLK I
Sbjct: 1357 -LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKKI 1392
Score = 65 (27.9 bits), Expect = 2.1e-274, Sum P(4) = 2.1e-274
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 617 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 649
Score = 40 (19.1 bits), Expect = 2.6e-253, Sum P(4) = 2.6e-253
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 40 (19.1 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 806
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1604 GEESEEEEEGEEEGSESESRSV 1625
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 2377 (841.8 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 455/654 (69%), Positives = 535/654 (81%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 711 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 770
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 771 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 830
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 831 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 890
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 891 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 950
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 951 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1010
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1011 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1070
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1191 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250
Query: 1043 LHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKEL 1097
L TVNQ+IAR E+E LF +MD +RR+ E KPRL+E EL
Sbjct: 1251 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1310
Query: 1098 PDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
P W++KDD EVE + GRGSR RK+VDY+DSLT+++WLKAI
Sbjct: 1311 PSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 1359
Score = 1359 (483.5 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1212 EKILAAAKYKLNVDQK 1227
Score = 237 (88.5 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 47/84 (55%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D +EYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 485 DFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 544
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELV 568
Score = 65 (27.9 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 617 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 649
Score = 40 (19.1 bits), Expect = 1.5e-253, Sum P(3) = 1.5e-253
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1538 GEESEEEEEGEEEGSESESRSV 1559
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 2377 (841.8 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 455/654 (69%), Positives = 535/654 (81%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 711 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 770
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 771 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 830
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 831 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 890
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 891 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 950
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 951 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1010
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1011 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1070
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1191 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250
Query: 1043 LHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKEL 1097
L TVNQ+IAR E+E LF +MD +RR+ E KPRL+E EL
Sbjct: 1251 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1310
Query: 1098 PDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
P W++KDD EVE + GRGSR RK+VDY+DSLT+++WLKAI
Sbjct: 1311 PSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 1359
Score = 1359 (483.5 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1212 EKILAAAKYKLNVDQK 1227
Score = 237 (88.5 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 47/84 (55%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D +EYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 485 DFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 544
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELV 568
Score = 65 (27.9 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 617 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 649
Score = 40 (19.1 bits), Expect = 1.5e-253, Sum P(3) = 1.5e-253
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1538 GEESEEEEEGEEEGSESESRSV 1559
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 2377 (841.8 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 455/654 (69%), Positives = 535/654 (81%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 711 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 770
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 771 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 830
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 831 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 890
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 891 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 950
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 951 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1010
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1011 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1070
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1191 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250
Query: 1043 LHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKEL 1097
L TVNQ+IAR E+E LF +MD +RR+ E KPRL+E EL
Sbjct: 1251 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1310
Query: 1098 PDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
P W++KDD EVE + GRGSR RK+VDY+DSLT+++WLKAI
Sbjct: 1311 PSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 1359
Score = 1359 (483.5 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1212 EKILAAAKYKLNVDQK 1227
Score = 237 (88.5 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 47/84 (55%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D +EYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 485 DFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 544
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELV 568
Score = 65 (27.9 bits), Expect = 2.3e-274, Sum P(3) = 2.3e-274
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 617 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 649
Score = 40 (19.1 bits), Expect = 1.5e-253, Sum P(3) = 1.5e-253
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1539 GEESEEEEEGEEEGSESESRSV 1560
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 2160 (765.4 bits), Expect = 7.0e-274, Sum P(4) = 7.0e-274
Identities = 406/544 (74%), Positives = 473/544 (86%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 510 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 569
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 570 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 629
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 630 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 689
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 690 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 749
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 750 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 809
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 810 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 869
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 870 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 929
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 930 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 989
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 990 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1049
Query: 1043 L-HQ 1045
L H+
Sbjct: 1050 LEHE 1053
Score = 1359 (483.5 bits), Expect = 1.6e-160, Sum P(2) = 1.6e-160
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 711 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 770
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 771 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 830
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 831 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 890
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 891 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 950
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 951 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1010
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1011 EKILAAAKYKLNVDQK 1026
Score = 237 (88.5 bits), Expect = 7.0e-274, Sum P(4) = 7.0e-274
Identities = 47/84 (55%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D +EYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 284 DFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 343
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 344 KKDKRLAYLLQQTDEYVANLTELV 367
Score = 226 (84.6 bits), Expect = 7.0e-274, Sum P(4) = 7.0e-274
Identities = 48/97 (49%), Positives = 63/97 (64%)
Query: 1060 TVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELPDWMVKDDDEVENSMYX 1114
TVNQ+IAR E+E LF +MD +RR+ E KPRL+E ELP W++KDD EVE
Sbjct: 1100 TVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVER---- 1155
Query: 1115 XXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
+ GRGSR RK+VDY+DSLT+++WLK +
Sbjct: 1156 -LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKQL 1191
Score = 65 (27.9 bits), Expect = 7.0e-274, Sum P(4) = 7.0e-274
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 416 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 448
Score = 40 (19.1 bits), Expect = 4.2e-253, Sum P(4) = 4.2e-253
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 312 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 348
Score = 40 (19.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 806
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 312 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 348
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 2370 (839.3 bits), Expect = 1.3e-273, Sum P(3) = 1.3e-273
Identities = 453/654 (69%), Positives = 534/654 (81%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 711 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 770
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 771 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 830
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 831 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 890
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 891 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 950
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 951 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1010
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1011 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1070
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1071 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1130
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1131 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1190
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1191 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1250
Query: 1043 LHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKEL 1097
L TVNQ+IAR E+E LF +MD +RR+ E KPRL+E EL
Sbjct: 1251 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1310
Query: 1098 PDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
P W++KDD EVE + GRGSR RK+VDY+DSLT+++WLK +
Sbjct: 1311 PSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKQL 1359
Score = 1359 (483.5 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 912 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 971
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 972 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1031
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1032 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1091
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 1092 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 1151
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1152 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1211
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1212 EKILAAAKYKLNVDQK 1227
Score = 237 (88.5 bits), Expect = 1.3e-273, Sum P(3) = 1.3e-273
Identities = 47/84 (55%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D +EYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 485 DFREYHRSVTGKLQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 544
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 545 KKDKRLAYLLQQTDEYVANLTELV 568
Score = 65 (27.9 bits), Expect = 1.3e-273, Sum P(3) = 1.3e-273
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 617 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 649
Score = 40 (19.1 bits), Expect = 8.1e-253, Sum P(3) = 8.1e-253
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 513 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 549
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1543 GEESEEEEEGEEEGSESESRSV 1564
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 2379 (842.5 bits), Expect = 2.0e-273, Sum P(3) = 2.0e-273
Identities = 450/653 (68%), Positives = 536/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 689 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 748
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMG GKT+QTIAL+TYLME K GPYL+IVPLSTLSNW EF+KWAPSA
Sbjct: 749 NLNGILADEMGPGKTIQTIALITYLMEHKGLNGPYLIIVPLSTLSNWTYEFDKWAPSAVK 808
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFN LLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 809 ISYKGTPAMRRSLVPQLRSGKFNALLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 868
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 869 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 928
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 929 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 988
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 989 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1048
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1049 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1108
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1109 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1168
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1169 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1228
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1229 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1288
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1289 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1336
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 889 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 948
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 949 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 1008
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 1009 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1068
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1069 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1128
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1129 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1188
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1189 EKILAAAKYKLNVDQK 1204
Score = 227 (85.0 bits), Expect = 2.0e-273, Sum P(3) = 2.0e-273
Identities = 45/84 (53%), Positives = 55/84 (65%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 468 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 527
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKD+RLA+LL QTDEY++NLT +V
Sbjct: 528 KKDRRLAYLLQQTDEYVANLTNLV 551
Score = 64 (27.6 bits), Expect = 2.0e-273, Sum P(3) = 2.0e-273
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V T + L G +AP A Q+ WL +PG+
Sbjct: 602 VKVTHTETGKVLFGPEAPKASQLDAWLEMNPGY 634
Score = 43 (20.2 bits), Expect = 5.6e-254, Sum P(3) = 5.6e-254
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 496 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 532
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 2351 (832.7 bits), Expect = 6.1e-272, Sum P(3) = 6.1e-272
Identities = 454/654 (69%), Positives = 533/654 (81%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 703 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 762
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 763 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 822
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 823 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 882
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 883 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 942
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 943 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 1002
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 1003 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 1062
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 1063 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 1122
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL FNEP S+YFI LLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 1123 KAEDRGMLLT-FNEPGSEYFI-LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 1180
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 1181 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 1240
Query: 1043 LHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKEL 1097
L TVNQ+IAR E+E LF +MD +RR+ E KPRL+E EL
Sbjct: 1241 LEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDEL 1300
Query: 1098 PDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
P W++KDD EVE + GRGSR RK+VDY+DSLT+++WLKAI
Sbjct: 1301 PSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 1349
Score = 1333 (474.3 bits), Expect = 6.5e-138, Sum P(2) = 6.5e-138
Identities = 251/316 (79%), Positives = 285/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 904 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 963
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 964 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 1023
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 1024 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 1083
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL FNEP S+YFI
Sbjct: 1084 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLT-FNEPGSEYFI 1142
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
LLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1143 -LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1201
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1202 EKILAAAKYKLNVDQK 1217
Score = 240 (89.5 bits), Expect = 6.1e-272, Sum P(3) = 6.1e-272
Identities = 48/84 (57%), Positives = 56/84 (66%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ T + QKL KA+ YH N LMAEDEEGYRKLIDQ
Sbjct: 477 DFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQ 536
Query: 374 KKDKRLAFLLSQTDEYISNLTQMV 397
KKDKRLA+LL QTDEY++NLT++V
Sbjct: 537 KKDKRLAYLLQQTDEYVANLTELV 560
Score = 65 (27.9 bits), Expect = 6.1e-272, Sum P(3) = 6.1e-272
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V S L G DAP A Q++ WL +PG+
Sbjct: 609 VKVIHVESGKILTGTDAPKAGQLEAWLEMNPGY 641
Score = 40 (19.1 bits), Expect = 8.2e-251, Sum P(3) = 8.2e-251
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 505 REQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKR 541
Score = 38 (18.4 bits), Expect = 6.5e-138, Sum P(2) = 6.5e-138
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 1529 GEESEEEEEGEEEGSESESRSV 1550
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 2390 (846.4 bits), Expect = 1.8e-271, Sum P(2) = 1.8e-271
Identities = 451/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 666 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 725
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 726 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 785
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 786 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 845
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 846 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 905
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 906 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 965
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 966 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1025
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1026 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1085
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1086 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1145
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1146 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1205
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1206 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1265
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1266 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1313
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 866 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 925
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 926 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 985
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 986 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1045
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1046 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1105
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1106 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1165
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1166 EKILAAAKYKLNVDQK 1181
Score = 244 (91.0 bits), Expect = 1.8e-271, Sum P(2) = 1.8e-271
Identities = 69/237 (29%), Positives = 99/237 (41%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 445 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 504
Query: 374 KKDKRLAFLLSQTDEYISNLTQMVXXXXXXXXXXXXXXXXXXXXXXXXXILDGNMXXXXX 433
KKD+RLA+LL QTDEY++NLT +V I +G
Sbjct: 505 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEE-IAEGGESALGP 563
Query: 434 XXXXXXXXXRIT---VKETNSDNK--LRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXX 488
+++ VK T+++ L G +AP A Q+ WL +PG+
Sbjct: 564 DGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESD 623
Query: 489 XXXXXXXXXXXPSKAVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGK 545
S+ E+K D + E I T + V ++ S+ + +
Sbjct: 624 SDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSAR 680
Score = 43 (20.2 bits), Expect = 3.3e-250, Sum P(2) = 3.3e-250
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 473 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 509
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 2390 (846.4 bits), Expect = 1.8e-271, Sum P(2) = 1.8e-271
Identities = 451/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 666 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 725
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 726 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 785
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 786 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 845
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 846 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 905
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 906 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 965
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 966 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1025
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1026 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1085
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1086 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1145
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1146 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1205
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1206 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1265
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1266 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1313
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 866 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 925
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 926 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 985
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 986 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1045
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1046 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1105
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1106 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1165
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1166 EKILAAAKYKLNVDQK 1181
Score = 244 (91.0 bits), Expect = 1.8e-271, Sum P(2) = 1.8e-271
Identities = 69/237 (29%), Positives = 99/237 (41%)
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQ 373
D KEYHR+ + QKL+KA+ +H N LMAEDEEGYRKLIDQ
Sbjct: 445 DFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQ 504
Query: 374 KKDKRLAFLLSQTDEYISNLTQMVXXXXXXXXXXXXXXXXXXXXXXXXXILDGNMXXXXX 433
KKD+RLA+LL QTDEY++NLT +V I +G
Sbjct: 505 KKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEE-IAEGGESALGP 563
Query: 434 XXXXXXXXXRIT---VKETNSDNK--LRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXX 488
+++ VK T+++ L G +AP A Q+ WL +PG+
Sbjct: 564 DGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESD 623
Query: 489 XXXXXXXXXXXPSKAVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGK 545
S+ E+K D + E I T + V ++ S+ + +
Sbjct: 624 SDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSAR 680
Score = 43 (20.2 bits), Expect = 3.3e-250, Sum P(2) = 3.3e-250
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 67 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
R KKE E E++ ++ D G +KL+ Q R
Sbjct: 473 REQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRR 509
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 2390 (846.4 bits), Expect = 1.9e-268, Sum P(3) = 1.9e-268
Identities = 451/653 (69%), Positives = 538/653 (82%)
Query: 507 KKTEDDEYK---DAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
K+ DDEY A +YY++AH E+V +Q+++++NG LK YQ++GLEWMVSLYNN
Sbjct: 666 KQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNN 725
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADEMGLGKT+QTIAL+TYLME K+ GPYL+IVPLSTLSNW EF+KWAPS
Sbjct: 726 NLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVK 785
Query: 624 VAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC 683
++YKG+P RR+L ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHHC
Sbjct: 786 ISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC 845
Query: 684 KLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG 743
KLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TG
Sbjct: 846 KLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG 905
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+V+LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+
Sbjct: 906 ERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 965
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+GILLTDGSEK K G+GGA+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++
Sbjct: 966 QAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVIN 1025
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
G ++YR SGKFELLDRILPK + T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTK
Sbjct: 1026 GAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTK 1085
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
SEDR LL+KFNEP S+YFIFLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAH
Sbjct: 1086 SEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAH 1145
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
RIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ IL
Sbjct: 1146 RIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAIL 1205
Query: 1044 HQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELP 1098
T+NQ+IAR E+E LF +MD +RR+ + KPRL+E ELP
Sbjct: 1206 EHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELP 1265
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
W++KDD EVE + GRGSRQR+ VDY+D+LT+++WL+AI
Sbjct: 1266 SWIIKDDAEVER-----LTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAI 1313
Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
Identities = 257/316 (81%), Positives = 292/316 (92%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGE+V+LNEEETILIIRRLHKV
Sbjct: 866 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 925
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLPEKVEY+IKCDMS LQK+LY+H+ +GILLTDGSEK K G+GG
Sbjct: 926 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGG 985
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
A+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +N V++G ++YR SGKFELLDRILPK
Sbjct: 986 AKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPK 1045
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVL+FCQMT LMTI+EDYF +R+F YLRLDGTTKSEDR LL+KFNEP S+YFI
Sbjct: 1046 LRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFI 1105
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQAADTV+IFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 1106 FLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 1165
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 1166 EKILAAAKYKLNVDQK 1181
Score = 167 (63.8 bits), Expect = 1.9e-268, Sum P(3) = 1.9e-268
Identities = 31/38 (81%), Positives = 36/38 (94%)
Query: 360 MAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMV 397
MAEDEEGYRKLIDQKKD+RLA+LL QTDEY++NLT +V
Sbjct: 491 MAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLV 528
Score = 66 (28.3 bits), Expect = 1.9e-268, Sum P(3) = 1.9e-268
Identities = 21/102 (20%), Positives = 36/102 (35%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGWXXXXXXXXXXXXXXXXXXXXXXXPSKA 503
+ V T + L G +AP A Q+ WL +PG+ S+
Sbjct: 579 VKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQ 638
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGK 545
E+K D + E I T + V ++ S+ + +
Sbjct: 639 ETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSAR 680
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 2160 (765.4 bits), Expect = 5.7e-246, Sum P(2) = 5.7e-246
Identities = 406/544 (74%), Positives = 473/544 (86%)
Query: 507 KKTEDDEYKDAGEEA----TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
K+ DDEY + A +YY++AH E+V +Q+++MVNG LK+YQIKGLEW+VSLYN
Sbjct: 44 KQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYN 103
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+IVPLSTLSNW EF+KWAPS
Sbjct: 104 NNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVV 163
Query: 623 VVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK +L+KI+WK MI+DEGHRMKNHH
Sbjct: 164 KVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHH 223
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
CKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA T
Sbjct: 224 CKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMT 283
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
GEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H
Sbjct: 284 GEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRH 343
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V
Sbjct: 344 MQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIV 403
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
G D+YR SGKFELLDRILPK + T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTT
Sbjct: 404 QGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTT 463
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
K+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRA
Sbjct: 464 KAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRA 523
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+ ER FLQ I
Sbjct: 524 HRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAI 583
Query: 1043 L-HQ 1045
L H+
Sbjct: 584 LEHE 587
Score = 1359 (483.5 bits), Expect = 2.9e-161, Sum P(2) = 2.9e-161
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 245 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 304
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 305 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 364
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 365 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 424
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 425 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 484
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 485 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 544
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 545 EKILAAAKYKLNVDQK 560
Score = 233 (87.1 bits), Expect = 5.7e-246, Sum P(2) = 5.7e-246
Identities = 50/97 (51%), Positives = 64/97 (65%)
Query: 1060 TVNQLIARTEDELTLFQKMDAERRKGET-----KPRLVEIKELPDWMVKDDDEVENSMYX 1114
TVNQ+IAR E+E LF +MD +RR+ E KPRL+E ELP W++KDD EVE
Sbjct: 634 TVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVER---- 689
Query: 1115 XXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
+ GRGSR RK+VDY+DSLT+++WLKAI
Sbjct: 690 -LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAI 725
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 905 GEESEEEEEGEEEGSESESRSV 926
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 2323 (822.8 bits), Expect = 5.1e-241, P = 5.1e-241
Identities = 442/616 (71%), Positives = 512/616 (83%)
Query: 541 MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
MVNG LK+YQIKGLEW+VSLYNNNLNGILADEMGLGKT+QTIAL+TYLME K+ GP+L+
Sbjct: 1 MVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLI 60
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKS 660
IVPLSTLSNW EF+KWAPS V+YKGSP ARRA ++++ KFNVLLTTYE+IIKDK
Sbjct: 61 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKH 120
Query: 661 VLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFL 720
+L+KI+WK MI+DEGHRMKNHHCKLTQ LNT Y + R+LLTGTPLQNKLPELWALLNFL
Sbjct: 121 ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFL 180
Query: 721 LPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQL 780
LP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKVLRPFLLRRLKKEVE+QL
Sbjct: 181 LPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQL 240
Query: 781 PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNH 840
PEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG + L NTI+QLRK+CNH
Sbjct: 241 PEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNH 300
Query: 841 PFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQL 900
P+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK + T H+VL+FCQMT L
Sbjct: 301 PYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSL 360
Query: 901 MTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAA 960
MTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+A
Sbjct: 361 MTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSA 420
Query: 961 DTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKV 1020
DTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KV
Sbjct: 421 DTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKV 480
Query: 1021 IQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDA 1080
IQAGMFDQKS+ ER FLQ IL TVNQ+IAR E+E LF +MD
Sbjct: 481 IQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDL 540
Query: 1081 ERRKGET-----KPRLVEIKELPDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQ 1135
+RR+ E KPRL+E ELP W++KDD EVE + GRGSR RK+
Sbjct: 541 DRRREEARNPKRKPRLMEEDELPSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKE 595
Query: 1136 VDYTDSLTDQEWLKAI 1151
VDY+DSLT+++WLKAI
Sbjct: 596 VDYSDSLTEKQWLKAI 611
Score = 1359 (483.5 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 252/316 (79%), Positives = 287/316 (90%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLP+IFKSCSTFEQWFNAPFA TGEKV+LNEEETILIIRRLHKV
Sbjct: 164 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKV 223
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVE+QLPEKVEY+IKCDMS LQ++LY+H+ +G+LLTDGSEK K G+GG
Sbjct: 224 LRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGG 283
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+ L NTI+QLRK+CNHP+MFQ+IEE + +H+G +V G D+YR SGKFELLDRILPK
Sbjct: 284 TKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPK 343
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T H+VL+FCQMT LMTI+EDYF +R F YLRLDGTTK+EDRG LL+ FNEP S+YFI
Sbjct: 344 LRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFI 403
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLGLNLQ+ADTVIIFDSDWNPHQDLQAQDRAHRIGQ+NEVRVLRL TVNSVE
Sbjct: 404 FLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVE 463
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAA+YKLN+D+K
Sbjct: 464 EKILAAAKYKLNVDQK 479
Score = 38 (18.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI 526
GE+ E++E ++ G E+ S+
Sbjct: 791 GEESEEEEEGEEEGSESESRSV 812
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 2054 (728.1 bits), Expect = 3.1e-236, Sum P(3) = 3.1e-236
Identities = 410/664 (61%), Positives = 504/664 (75%)
Query: 501 SKAVGEK-KTEDDEY--KDAGEEATYYSIAHTYHEKVTEQASIMVNGK----LKEYQIKG 553
+K + EK + E+DEY K + A YY+ AH EKV +Q + M G LK YQIKG
Sbjct: 481 AKMILEKARNEEDEYDQKTKKQMADYYATAHKIKEKVVKQHTTMGGGDPNLLLKPYQIKG 540
Query: 554 LEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLE 613
LEWMVSLYNNNLNGILADEMGLGKT+QTI+L+TYLME K+N GPYLVIVPLSTLSNW E
Sbjct: 541 LEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNNGPYLVIVPLSTLSNWQNE 600
Query: 614 FEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIID 673
F KWAPS + YKG+ ARR ++G+++ FNVL+TTYE++IK+K++L KI+WK MIID
Sbjct: 601 FAKWAPSVTTIIYKGTKDARRRVEGQIRKGAFNVLMTTYEYVIKEKALLGKIRWKYMIID 660
Query: 674 EGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQ 733
EGHR+KNH+CKLT LN F+++ HR+LLTGTPLQNKLPELWALLNFLLPSIF SC TFEQ
Sbjct: 661 EGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQ 720
Query: 734 WFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMS 793
WFNAPFATTGEKVELN+EET+LIIRRLHKVLRPFLLRRLKKEVESQLP+K EY+IKCD S
Sbjct: 721 WFNAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLRRLKKEVESQLPDKTEYVIKCDQS 780
Query: 794 GLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQ 853
LQK++Y+H+ +G+LL D GAR+L NT+V LRKLCNHPF+F NIE+ C+
Sbjct: 781 ALQKVIYRHMQ-KGLLL-DAKMSS-----GARSLMNTVVHLRKLCNHPFLFPNIEDS-CR 832
Query: 854 HIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDF 913
+ N V +G D+ R +GK ELLDRILPK K T HR+LMF QMT +M I ED+ +R +
Sbjct: 833 AYWKVNEV-NGTDLMRVAGKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRY 891
Query: 914 SYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 973
+YLRLDG+TK ++RG+LL +FN P S F+F+LSTRAGGLGLNLQ ADTVIIFDSDWNPH
Sbjct: 892 TYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPH 951
Query: 974 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGS 1033
QD+QAQDRAHRIGQK EVRVLRLIT NSVEE+ILAAARYKLN+DEKVIQAG FDQ+STG+
Sbjct: 952 QDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVDEKVIQAGKFDQRSTGA 1011
Query: 1034 ERHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-----K 1088
ER + L+ I+ TVNQ++AR+E+E +FQ MD +RR+ E K
Sbjct: 1012 ERKQMLEQIIQADGEEEEEEEVPDDETVNQMVARSEEEFNIFQSMDIDRRREEANQLHRK 1071
Query: 1089 PRLVEIKELPDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYT-DSLTDQEW 1147
PRL+E E+PD ++K + E M R+R++VDY+ D L+D+++
Sbjct: 1072 PRLLEEHEIPDDILKLSFDYEE-MERAREEGREVVDQTPNQRRRRREVDYSSDLLSDEQF 1130
Query: 1148 LKAI 1151
+K +
Sbjct: 1131 MKQV 1134
Score = 1176 (419.0 bits), Expect = 1.8e-119, P = 1.8e-119
Identities = 229/316 (72%), Positives = 264/316 (83%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLPSIF SC TFEQWFNAPFATTGEKVELN+EET+LIIRRLHKV
Sbjct: 691 TPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGEKVELNQEETMLIIRRLHKV 750
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVESQLP+K EY+IKCD S LQK++Y+H+ +G+LL D G
Sbjct: 751 LRPFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRHMQ-KGLLL-DAKMSS-----G 803
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
AR+L NT+V LRKLCNHPF+F NIE+ C+ + N V +G D+ R +GK ELLDRILPK
Sbjct: 804 ARSLMNTVVHLRKLCNHPFLFPNIEDS-CRAYWKVNEV-NGTDLMRVAGKLELLDRILPK 861
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
K T HR+LMF QMT +M I ED+ +R ++YLRLDG+TK ++RG+LL +FN P S F+
Sbjct: 862 LKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFL 921
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
F+LSTRAGGLGLNLQ ADTVIIFDSDWNPHQD+QAQDRAHRIGQK EVRVLRLIT NSVE
Sbjct: 922 FMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVE 981
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAARYKLN+DEK
Sbjct: 982 EKILAAARYKLNVDEK 997
Score = 192 (72.6 bits), Expect = 3.1e-236, Sum P(3) = 3.1e-236
Identities = 38/82 (46%), Positives = 48/82 (58%)
Query: 316 KEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKK 375
KEYHRNN + K KA++ YH N LM EDEEGYR L+D+KK
Sbjct: 299 KEYHRNNLLKMAKSRKAVMTYHQNNERERKKDEIRNEKLRMQKLMQEDEEGYRALLDEKK 358
Query: 376 DKRLAFLLSQTDEYISNLTQMV 397
D+RL +LL QTDEY+ +L +V
Sbjct: 359 DQRLVYLLQQTDEYVDSLCSLV 380
Score = 72 (30.4 bits), Expect = 3.1e-236, Sum P(3) = 3.1e-236
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V+E ++ L G+ AP ++I+ WL +HP
Sbjct: 408 RVHVRERSTGKALTGDQAPKTEEIEFWLETHP 439
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 1981 (702.4 bits), Expect = 1.8e-218, Sum P(2) = 1.8e-218
Identities = 390/662 (58%), Positives = 497/662 (75%)
Query: 502 KAVGEK-KTEDDEYKDAGEE--ATYYSIAHTYHEKVTEQASIMVNG----KLKEYQIKGL 554
K++ +K + +DDEY++ + YY+ AH E++ EQ +M G KLK YQIKGL
Sbjct: 315 KSILDKARNDDDEYENKTKMNIEDYYTTAHGVREEIKEQHFMMGGGNPSLKLKPYQIKGL 374
Query: 555 EWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEF 614
EWMVSL+NNNLNGILADEMGLGKT+QTIA +TYLME KK GP+LVIVPLST+ NW EF
Sbjct: 375 EWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNEF 434
Query: 615 EKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDE 674
+KWA + +++AYKG R+ + +K+ KFNVLLTT+E++I++K++L K++WK MIIDE
Sbjct: 435 DKWAANVHLIAYKGPKETRKVFEPIIKSGKFNVLLTTFEYVIREKALLGKLRWKYMIIDE 494
Query: 675 GHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQW 734
GHR+KN HCKLT+ LNT + R+L+TGTPLQNKLPELWALLNFLLPSIF SCSTFEQW
Sbjct: 495 GHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPSIFSSCSTFEQW 554
Query: 735 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSG 794
FNAPFATTGEKVEL +EET+LIIRRLHKVLRPFLLRRLKKEVES+LP+K+E++++CDMS
Sbjct: 555 FNAPFATTGEKVELTQEETMLIIRRLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDMSA 614
Query: 795 LQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 854
LQK+LY+H+ +G+LL GKT G +++L+NT++ LRKLCNHPF+F+N+EE C++
Sbjct: 615 LQKVLYKHMQ-KGLLLD-----GKTNTG-SKSLRNTMIHLRKLCNHPFLFENVEES-CRN 666
Query: 855 IGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFS 914
+S D+YR SGK ELL RILPK + T HRVLMF QMT +MTI+ED+
Sbjct: 667 FWDAR-FISAVDLYRVSGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQ 725
Query: 915 YLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ 974
YLRLDG+TK ++RG LL KFN P S+YF+F+LSTRAGGLGLNLQ ADTVIIFDSDWNPHQ
Sbjct: 726 YLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQ 785
Query: 975 DLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSE 1034
D+QAQDRAHRIGQK EVRV RLIT NSVEE+ILAAARYKLN+DEKVIQAG FD +STG+E
Sbjct: 786 DMQAQDRAHRIGQKAEVRVFRLITANSVEEKILAAARYKLNVDEKVIQAGKFDNRSTGAE 845
Query: 1035 RHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGE----TKPR 1090
R E L+ I+ +N +++R+E+E LFQKMD ER + E KPR
Sbjct: 846 RREILENIIKTENESEEDEEVPNDEDINDILSRSEEEFELFQKMDQERFENEQAQKAKPR 905
Query: 1091 LVEIKELPDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYT-DSLTDQEWLK 1149
LV E+P +++ DE + +M R R++VDY+ D+++D ++L+
Sbjct: 906 LVGEDEIPRDILRAADETDYIEKAKEEGRVPYLEVMPGSRRTRREVDYSADTMSDDKFLE 965
Query: 1150 AI 1151
+
Sbjct: 966 KL 967
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 226/316 (71%), Positives = 266/316 (84%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQNKLPELWALLNFLLPSIF SCSTFEQWFNAPFATTGEKVEL +EET+LIIRRLHKV
Sbjct: 524 TPLQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGEKVELTQEETMLIIRRLHKV 583
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKKEVES+LP+K+E++++CDMS LQK+LY+H+ +G+LL GKT G
Sbjct: 584 LRPFLLRRLKKEVESELPDKMEFVVRCDMSALQKVLYKHMQ-KGLLLD-----GKTNTG- 636
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+++L+NT++ LRKLCNHPF+F+N+EE C++ +S D+YR SGK ELL RILPK
Sbjct: 637 SKSLRNTMIHLRKLCNHPFLFENVEES-CRNFWDAR-FISAVDLYRVSGKLELLSRILPK 694
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+ T HRVLMF QMT +MTI+ED+ YLRLDG+TK ++RG LL KFN P S+YF+
Sbjct: 695 LQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFL 754
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
F+LSTRAGGLGLNLQ ADTVIIFDSDWNPHQD+QAQDRAHRIGQK EVRV RLIT NSVE
Sbjct: 755 FMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVE 814
Query: 301 ERILAAARYKLNMDEK 316
E+ILAAARYKLN+DEK
Sbjct: 815 EKILAAARYKLNVDEK 830
Score = 152 (58.6 bits), Expect = 1.8e-218, Sum P(2) = 1.8e-218
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 316 KEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKK 375
KE+H+ N K+ K++ Y N L+ EDEEGYR ++D+KK
Sbjct: 203 KEFHKRNMLNHTKVRKSMQQYITNENKRIAREEMKNEKNRIQKLIQEDEEGYRAMLDEKK 262
Query: 376 DKRLAFLLSQTDEYISNLTQMV 397
D+RL +LL QTD+YI +L ++
Sbjct: 263 DQRLVYLLEQTDDYIKSLCDLL 284
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 1093 EIKELPDWMVKDDDEVEN 1110
++K + D DDDE EN
Sbjct: 313 KVKSILDKARNDDDEYEN 330
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 1900 (673.9 bits), Expect = 2.1e-204, Sum P(2) = 2.1e-204
Identities = 378/652 (57%), Positives = 482/652 (73%)
Query: 512 DEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILAD 571
DE + + YY++AH E++TEQ SI+V G LKEYQ+KGL+WM+SLYNNNLNGILAD
Sbjct: 503 DEEGEGRRKIDYYAVAHRIKEEITEQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILAD 562
Query: 572 EMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPL 631
EMGLGKT+QTI+L+T+++E+K+N GP+LVIVPLSTL+NW LEFEKWAPS + + YKG P
Sbjct: 563 EMGLGKTIQTISLITHIIERKRNNGPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPN 622
Query: 632 ARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNT 691
AR+ Q ++ F VLLTTYE+IIKD+ +LSKI+W MI+DEGHRMKN KL+ TL+
Sbjct: 623 ARKQQQQNIRWGNFQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQ 682
Query: 692 FYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELN 749
+Y S +R++LTGTPLQN LPELWALLNF+LP+IFKS +F++WFN PFA TG ++++L
Sbjct: 683 YYTSRYRLILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLT 742
Query: 750 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL--HNRG 807
EEE +L+IRRLHKVLRPFLLRRLKK+VE LP+K E +IKC S LQ L + L HN+
Sbjct: 743 EEEQLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATHNK- 801
Query: 808 ILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDI 867
++++DG KG G+ G R L N ++QLRKLCNHPF+F+ +E++ G N+ I
Sbjct: 802 MVVSDG--KG--GKVGMRGLSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDL------I 851
Query: 868 YRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDR 927
+RT+GKFELLDRILPKFK T HRVLMF QMTQ+M I+ED+ R YLRLDG+TKS+DR
Sbjct: 852 WRTAGKFELLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDR 911
Query: 928 GELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQ 987
+LL+ FN P+S+YF FLLSTRAGGLGLNLQ ADTVIIFDSDWNPHQDLQAQDRAHRIGQ
Sbjct: 912 SDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQ 971
Query: 988 KNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILH--Q 1045
KNEVR+LRLIT NSVEE+IL A++KL+MD KVIQAG FD KST ER L+T+L +
Sbjct: 972 KNEVRILRLITSNSVEEKILERAQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLETAE 1031
Query: 1046 XXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRK------GETKPRLVEIKELPD 1099
+N ++AR+++EL +FQ+MD ER+K G PRL+ ELP+
Sbjct: 1032 GTDQAGDQDEMDDDDLNNIMARSDEELAVFQRMDRERQKTCPYGPGHKLPRLMGESELPE 1091
Query: 1100 WMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
V +++ V L GRG+R+RK Y D LT+++WL A+
Sbjct: 1092 IYVTEENPVAEE--------AAEIELSGRGARERKITRYDDGLTEEQWLMAV 1135
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 210/320 (65%), Positives = 255/320 (79%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
TPLQN LPELWALLNF+LP+IFKS +F++WFN PFA TG ++++L EEE +L+IRRLH
Sbjct: 695 TPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLH 754
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL--HNRGILLTDGSEKGKT 116
KVLRPFLLRRLKK+VE LP+K E +IKC S LQ L + L HN+ ++++DG KG
Sbjct: 755 KVLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAKLNKQLATHNK-MVVSDG--KG-- 809
Query: 117 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDR 176
G+ G R L N ++QLRKLCNHPF+F+ +E++ G N+ I+RT+GKFELLDR
Sbjct: 810 GKVGMRGLSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDL------IWRTAGKFELLDR 863
Query: 177 ILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPES 236
ILPKFK T HRVLMF QMTQ+M I+ED+ R YLRLDG+TKS+DR +LL+ FN P+S
Sbjct: 864 ILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAPDS 923
Query: 237 KYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITV 296
+YF FLLSTRAGGLGLNLQ ADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR+LRLIT
Sbjct: 924 EYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITS 983
Query: 297 NSVEERILAAARYKLNMDEK 316
NSVEE+IL A++KL+MD K
Sbjct: 984 NSVEEKILERAQFKLDMDGK 1003
Score = 100 (40.3 bits), Expect = 2.1e-204, Sum P(2) = 2.1e-204
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 325 RTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLS 384
R KL + ++ +H + L A DEE Y KL+ Q KD R++ LL+
Sbjct: 401 RAGKLGRMMLQHHQHMEREEQRRVERTAKQRLQALKANDEETYLKLLGQAKDSRISHLLN 460
Query: 385 QTDEYISNLTQMV 397
QTD ++ L V
Sbjct: 461 QTDGFLKQLAASV 473
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 1855 (658.1 bits), Expect = 3.0e-203, Sum P(2) = 3.0e-203
Identities = 367/633 (57%), Positives = 469/633 (74%)
Query: 523 YYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTI 582
Y+ +AH HE+V EQ I V G LK+YQ+KGLEWM+SLYNNNLNGILADEMGLGKT+QTI
Sbjct: 847 YFKVAHRIHEEV-EQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTI 905
Query: 583 ALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN 642
A +TYL+EKK GP+L+IVPLSTL+NW++EFEKWAPS +AYKG P R+ LQ ++++
Sbjct: 906 AFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQIRS 965
Query: 643 SKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLT 702
S FNVLLTT+E+IIKD+ +LS+I+W MIIDEGHR+KN KLT TL+T+Y+S +R++LT
Sbjct: 966 SNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILT 1025
Query: 703 GTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRL 760
GTPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+ LNEEE +LII+RL
Sbjct: 1026 GTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRL 1085
Query: 761 HKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTG 820
HKVLRPFL RRLKK+VE +LP+KVE +IKC +SGLQ LYQ + G+L DG EKGKTG
Sbjct: 1086 HKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDG-EKGKTG 1144
Query: 821 EGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRI 880
G L+NT++QL+K+CNHPF+F+++E I + T V ++R +GKFELLDRI
Sbjct: 1145 IKG---LQNTVMQLKKICNHPFIFEDVERA----IDPSGTNVDL--LWRAAGKFELLDRI 1195
Query: 881 LPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESK 940
LPK T H+ LMF QMTQ+MTI+EDY +++ YLRLDG+TKS+DR LL +FN+P+S
Sbjct: 1196 LPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSD 1255
Query: 941 YFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVN 1000
+IF+LSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQ EVR+LRLIT
Sbjct: 1256 VYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEK 1315
Query: 1001 SVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL-HQXXXXXXXXXXXXXX 1059
S+EE IL+ A+YKL++D KVIQAG FD KST ER FL+++L H
Sbjct: 1316 SIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGDDDHDLTYGELQD 1375
Query: 1060 T-VNQLIARTEDELTLFQKMDAERRK----GETKP--RLVEIKELPDWMVKDDDEVENSM 1112
+N+LI+RT++EL LF+K+D ER G+ KP RL+ + ELPD+ +VE
Sbjct: 1376 DELNELISRTDEELVLFKKLDKERAATDIYGKGKPLERLLTVNELPDFY-----KVEVDS 1430
Query: 1113 YXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQ 1145
+ + R R+R + YT+ D+
Sbjct: 1431 FAVQSSSELEDQYLERKRRRRNSISYTELTLDE 1463
Score = 1035 (369.4 bits), Expect = 1.3e-103, P = 1.3e-103
Identities = 203/318 (63%), Positives = 251/318 (78%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
TPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+ LNEEE +LII+RLH
Sbjct: 1027 TPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLH 1086
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
KVLRPFL RRLKK+VE +LP+KVE +IKC +SGLQ LYQ + G+L DG EKGKTG
Sbjct: 1087 KVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDG-EKGKTGI 1145
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
G L+NT++QL+K+CNHPF+F+++E I + T V ++R +GKFELLDRIL
Sbjct: 1146 KG---LQNTVMQLKKICNHPFIFEDVERA----IDPSGTNVDL--LWRAAGKFELLDRIL 1196
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
PK T H+ LMF QMTQ+MTI+EDY +++ YLRLDG+TKS+DR LL +FN+P+S
Sbjct: 1197 PKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDV 1256
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
+IF+LSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQ EVR+LRLIT S
Sbjct: 1257 YIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKS 1316
Query: 299 VEERILAAARYKLNMDEK 316
+EE IL+ A+YKL++D K
Sbjct: 1317 IEENILSRAQYKLDLDGK 1334
Score = 134 (52.2 bits), Expect = 3.0e-203, Sum P(2) = 3.0e-203
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 320 RNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRL 379
+ N A+TQ+ K IIN+H + L A+DE Y +L+D+ KD R+
Sbjct: 736 KQNKAKTQRC-KDIINFHAHLEKEEKKRIERSARQRLQALRADDEAAYLQLLDKAKDTRI 794
Query: 380 AFLLSQTDEYISNLTQMV 397
LL QTD+Y+ NLT+ V
Sbjct: 795 THLLKQTDQYLENLTRAV 812
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 1850 (656.3 bits), Expect = 5.0e-203, Sum P(2) = 5.0e-203
Identities = 361/636 (56%), Positives = 475/636 (74%)
Query: 523 YYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTI 582
YY++AH E VTEQ SI+V GKLKEYQ++GL+WM+SLYNN+LNGILADEMGLGKT+QTI
Sbjct: 394 YYNVAHNIREVVTEQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTI 453
Query: 583 ALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN 642
+L+T+L+EKK+ GP+LVIVPLSTL+NW +EFE+WAPS + YKG P R+AL ++++
Sbjct: 454 SLITHLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQVRH 513
Query: 643 SKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLT 702
S F VLLTTYE+IIKD+ +LS+I+W MIIDEGHRMKN KLT TL T+Y+S +R++LT
Sbjct: 514 SNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILT 573
Query: 703 GTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRL 760
GTPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+EL EEE++L+IRRL
Sbjct: 574 GTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRL 633
Query: 761 HKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTG 820
HKVLRPFLLRRLKK+VE++LP+KVE +I+C MSGLQ+ LY + G+L + +++GKTG
Sbjct: 634 HKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTG 693
Query: 821 EGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRI 880
G L+NT++QL+K+CNHPF+F+++E G N + ++R SGKFELLDRI
Sbjct: 694 IKG---LQNTVMQLKKICNHPFVFEDVERSI-DPTGFNYDM-----LWRVSGKFELLDRI 744
Query: 881 LPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESK 940
LPK + HR+LMF QMTQ+M I+EDY +R + YLRLDG+TK++DR +LL FN+P ++
Sbjct: 745 LPKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAE 804
Query: 941 YFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVN 1000
+FLLSTRAGGLGLNLQ ADTVIIFDSDWNPHQDLQAQDRAHRIGQ EVR+ RLIT
Sbjct: 805 VNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEK 864
Query: 1001 SVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXXXXXT 1060
SVEE ILA A+YKL++D KVIQAG FD KST ER FL+++L
Sbjct: 865 SVEENILARAQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSLLENENGEEENDEKGELDD 924
Query: 1061 --VNQLIARTEDELTLFQKM--DAERR----KGETKPRLVEIKELPDWMVKDDDEVENSM 1112
+N+++AR +DEL LF++M D ER K + K RL+++ ELP++ +++ E +
Sbjct: 925 DELNEILARGDDELRLFKQMTEDLERESPYGKNKEKERLIQVSELPEFYQREEPEKTTDL 984
Query: 1113 YXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWL 1148
+GRG+R+R V Y +++ D +W+
Sbjct: 985 LQEEP--------LGRGARRRTPVVYDEAVRDAQWM 1012
Score = 1027 (366.6 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 199/318 (62%), Positives = 251/318 (78%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
TPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+EL EEE++L+IRRLH
Sbjct: 575 TPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLH 634
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
KVLRPFLLRRLKK+VE++LP+KVE +I+C MSGLQ+ LY + G+L + +++GKTG
Sbjct: 635 KVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQMKKHGMLYVEDAKRGKTGI 694
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
G L+NT++QL+K+CNHPF+F+++E G N + ++R SGKFELLDRIL
Sbjct: 695 KG---LQNTVMQLKKICNHPFVFEDVERSI-DPTGFNYDM-----LWRVSGKFELLDRIL 745
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
PK + HR+LMF QMTQ+M I+EDY +R + YLRLDG+TK++DR +LL FN+P ++
Sbjct: 746 PKLFRSGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEV 805
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
+FLLSTRAGGLGLNLQ ADTVIIFDSDWNPHQDLQAQDRAHRIGQ EVR+ RLIT S
Sbjct: 806 NLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKS 865
Query: 299 VEERILAAARYKLNMDEK 316
VEE ILA A+YKL++D K
Sbjct: 866 VEENILARAQYKLDIDGK 883
Score = 137 (53.3 bits), Expect = 5.0e-203, Sum P(2) = 5.0e-203
Identities = 30/78 (38%), Positives = 38/78 (48%)
Query: 320 RNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRL 379
+N AR QK N+A++ YH + L DEE Y KLIDQ KD R+
Sbjct: 287 KNAQARAQKANRAVLAYHSHIEKEEQRRAERNAKQRLQALKENDEEAYLKLIDQAKDTRI 346
Query: 380 AFLLSQTDEYISNLTQMV 397
LL QTD Y+ +L V
Sbjct: 347 THLLRQTDHYLDSLAAAV 364
Score = 37 (18.1 bits), Expect = 1.7e-105, Sum P(2) = 1.7e-105
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 769 LRRLKKEVESQLPEKVE 785
LR ++ E SQL +++E
Sbjct: 1180 LRGMEAEATSQLEDRIE 1196
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 1826 (647.8 bits), Expect = 8.0e-202, Sum P(3) = 8.0e-202
Identities = 366/658 (55%), Positives = 473/658 (71%)
Query: 500 PSKAVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVS 559
P AV E K++D + E+ YY +AH EK+TEQ +I+V GKLKEYQ+KGLEWMVS
Sbjct: 458 PEVAV-ENKSDDKA--ELREKTDYYEVAHRIKEKITEQPTILVGGKLKEYQMKGLEWMVS 514
Query: 560 LYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAP 619
LYNN+LNGILADEMGLGKT+Q+I+L+TYL+EKK +L+IVPLST++NW LEFEKWAP
Sbjct: 515 LYNNHLNGILADEMGLGKTIQSISLVTYLIEKKHE-NKFLIIVPLSTITNWTLEFEKWAP 573
Query: 620 SANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMK 679
S V+ YKGS RR+LQ ++ F VLLTTYE++I+++ +L+K + MIIDEGHRMK
Sbjct: 574 SIKVIVYKGSQQQRRSLQPDIRYGNFQVLLTTYEYVIRERPMLAKFHYSHMIIDEGHRMK 633
Query: 680 NHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPF 739
N KL+QTL T+Y + +R++LTGTPLQN LPELWALLNF+LP IF S +F+ WFN PF
Sbjct: 634 NAQSKLSQTLRTYYKTKNRLILTGTPLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPF 693
Query: 740 ATTG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQK 797
A TG EK+EL EEE++L+IRRLHKVLRPFLLRRLKK+VE LP+KVE ++KC++SGLQ
Sbjct: 694 ANTGAQEKIELTEEESLLVIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQY 753
Query: 798 LLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQ 857
+LYQ + L G++ G + G + L N I+QLRK+CNHPF+F+ +E
Sbjct: 754 VLYQQMLKHNALFV-GADVGGA-KSGIKGLNNKIMQLRKICNHPFVFEEVESVL------ 805
Query: 858 NNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLR 917
N++ ++ I+R SGKFELLDR+LPKFK++ HRVLMF QMTQ+M I+ED+ W+D YLR
Sbjct: 806 NSSRLTNDLIWRVSGKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLR 865
Query: 918 LDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQ 977
LDG+TK+E+R ++L+ FN P+S YF FLLSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQ
Sbjct: 866 LDGSTKAEERQDMLKVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ 925
Query: 978 AQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHE 1037
AQDRAHRIGQKNEVR+LRLIT +SVEE IL A KL++D KVIQAG FD KST E+
Sbjct: 926 AQDRAHRIGQKNEVRILRLITNDSVEEVILERAHQKLDIDGKVIQAGKFDNKSTAEEQEA 985
Query: 1038 FLQTILHQXXXXXXXXXXXXXXT--VNQLIARTEDELTLFQKMDAERRKGET--KPRLVE 1093
FL+ +L +N+++AR+E+E LF MD ER+ + K RL+E
Sbjct: 986 FLKRLLEADANGADNEENDSLDDDELNEILARSEEEKVLFASMDEERKSEKVPYKSRLIE 1045
Query: 1094 IKELPDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
ELP +D + + M R +K+V Y D L++++WLKA+
Sbjct: 1046 KDELPAVFTED-------ISHHFEKKEKELSKM----RDKKRVRYDDGLSEEQWLKAM 1092
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 214/406 (52%), Positives = 283/406 (69%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
TPLQN LPELWALLNF+LP IF S +F+ WFN PFA TG EK+EL EEE++L+IRRLH
Sbjct: 658 TPLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLH 717
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
KVLRPFLLRRLKK+VE LP+KVE ++KC++SGLQ +LYQ + L G++ G +
Sbjct: 718 KVLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHNALFV-GADVGGA-K 775
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
G + L N I+QLRK+CNHPF+F+ +E N++ ++ I+R SGKFELLDR+L
Sbjct: 776 SGIKGLNNKIMQLRKICNHPFVFEEVESVL------NSSRLTNDLIWRVSGKFELLDRVL 829
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
PKFK++ HRVLMF QMTQ+M I+ED+ W+D YLRLDG+TK+E+R ++L+ FN P+S Y
Sbjct: 830 PKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAPDSDY 889
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
F FLLSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRLIT +S
Sbjct: 890 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITNDS 949
Query: 299 VEERILAAARYKLNMDEK-----EYHRNNTARTQK-LNKAIINYHINAXXXXXXXXXXXX 352
VEE IL A KL++D K ++ +TA Q+ K ++ N
Sbjct: 950 VEEVILERAHQKLDIDGKVIQAGKFDNKSTAEEQEAFLKRLLEADANGADNEENDSLDDD 1009
Query: 353 XXXXXXLMAEDEEG-YRKLIDQKKDKRLAFL--LSQTDEYISNLTQ 395
+E+E+ + + +++K +++ + L + DE + T+
Sbjct: 1010 ELNEILARSEEEKVLFASMDEERKSEKVPYKSRLIEKDELPAVFTE 1055
Score = 113 (44.8 bits), Expect = 8.0e-202, Sum P(3) = 8.0e-202
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 301 ERILAAARYKLNMDEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLM 360
E++ + E +Y R++ R+ L + I N+H L
Sbjct: 343 EKVDLVVEKSTSRSEAKYVRDHY-RSHYLVRQINNFHQTTEKEESKKLERTAKQRLQALR 401
Query: 361 AEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMV 397
+ DEE Y KL+D+ KD R+ LL QT++++ +LT+ V
Sbjct: 402 SNDEEAYLKLLDKTKDHRITHLLKQTNQFLDSLTEKV 438
Score = 53 (23.7 bits), Expect = 8.0e-202, Sum P(3) = 8.0e-202
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 193 QMTQLMTILEDYFIWRDFS--YLRLDGTTKSEDR-GELLRKFNEPESKYFIFLLSTRAGG 249
Q+ L+ + DY + F + + TK +D E+L K E E+ + TRA
Sbjct: 137 QVAGLLLLSRDYDLPEKFQKEFTTISDQTKKDDLVNEILEKLTELETDF-----ETRAQN 191
Query: 250 LGLNL 254
LG+ +
Sbjct: 192 LGIKV 196
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 1823 (646.8 bits), Expect = 1.2e-197, Sum P(2) = 1.2e-197
Identities = 361/659 (54%), Positives = 475/659 (72%)
Query: 508 KTEDDEYKDAGEEAT--YYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNL 565
K +D+EY D + + YY++AH E + +Q SI+V G LK+YQIKGL+WMVSL+NN+L
Sbjct: 727 KMKDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHL 786
Query: 566 NGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVA 625
NGILADEMGLGKT+QTI+LLTYL E K GPYLVIVPLSTLSNW EF KWAP+ ++
Sbjct: 787 NGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTIS 846
Query: 626 YKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
+KGSP R+A Q +++ +F+V+LTT+E+IIK++++LSK++W MIIDEGHRMKN KL
Sbjct: 847 FKGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKL 906
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG-- 743
+ TLNT Y++ +R++LTGTPLQN LPELWALLNF+LP IF S +F++WFN PFA TG
Sbjct: 907 SLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQ 966
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH- 802
+K+EL+EEET+L+IRRLHKVLRPFLLRRLKK+VE +LP+KVE ++KC MS LQ+++YQ
Sbjct: 967 DKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQM 1026
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
L R + + D + K G R N I+QL+K+CNHPF+F+ +E++ N T
Sbjct: 1027 LKYRRLFIGDQNNKKMVG---LRGFNNQIMQLKKICNHPFVFEEVEDQI------NPTRE 1077
Query: 863 SGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTT 922
+ DI+R +GKFELLDRILPK K T HRVL+F QMTQ+M I+ED+ + + YLRLDG T
Sbjct: 1078 TNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHT 1137
Query: 923 KSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRA 982
KS++R ELLR FN P+S+Y F+LSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRA
Sbjct: 1138 KSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRA 1197
Query: 983 HRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
HRIGQKNEVR+LRLIT NSVEE IL A KL++D KVIQAG FD KST E+ L+++
Sbjct: 1198 HRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEALLRSL 1257
Query: 1043 LH-------QXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGE----TKPRL 1091
L + +N+++AR ++E+ + +MD +R K E K RL
Sbjct: 1258 LDAEEERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEEELGVKSRL 1317
Query: 1092 VEIKELPDWMVKD-DDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLK 1149
+E ELPD +D E++ GRG+R+RK Y D++++++WL+
Sbjct: 1318 LEKSELPDIYSRDIGAELKRE------ESESAAVYNGRGARERKTATYNDNMSEEQWLR 1370
Score = 1030 (367.6 bits), Expect = 6.8e-104, Sum P(2) = 6.8e-104
Identities = 202/319 (63%), Positives = 248/319 (77%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
TPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+EL+EEET+L+IRRLH
Sbjct: 925 TPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLH 984
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH-LHNRGILLTDGSEKGKTG 117
KVLRPFLLRRLKK+VE +LP+KVE ++KC MS LQ+++YQ L R + + D + K G
Sbjct: 985 KVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVG 1044
Query: 118 EGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRI 177
R N I+QL+K+CNHPF+F+ +E++ N T + DI+R +GKFELLDRI
Sbjct: 1045 ---LRGFNNQIMQLKKICNHPFVFEEVEDQI------NPTRETNDDIWRVAGKFELLDRI 1095
Query: 178 LPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESK 237
LPK K T HRVL+F QMTQ+M I+ED+ + + YLRLDG TKS++R ELLR FN P+S+
Sbjct: 1096 LPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSE 1155
Query: 238 YFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVN 297
Y F+LSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRLIT N
Sbjct: 1156 YLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTN 1215
Query: 298 SVEERILAAARYKLNMDEK 316
SVEE IL A KL++D K
Sbjct: 1216 SVEEVILERAYKKLDIDGK 1234
Score = 576 (207.8 bits), Expect = 3.5e-50, Sum P(2) = 3.5e-50
Identities = 128/244 (52%), Positives = 164/244 (67%)
Query: 155 NNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLR 214
N T + DI+R +GKFELLDRILPK K T HRVL+F QMTQ+M I+ED+ + + YLR
Sbjct: 1073 NPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLR 1132
Query: 215 LDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQ 274
LDG TKS++R ELLR FN P+S+Y F+LSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQ
Sbjct: 1133 LDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQ 1192
Query: 275 AQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEK--EYHRNNTARTQKLNKA 332
AQDRAHRIGQKNEVR+LRLIT NSVEE IL A KL++D K + + + T + +A
Sbjct: 1193 AQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQEA 1252
Query: 333 IINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ ++A E+EE + KD + +L++ DE ++
Sbjct: 1253 LLRSLLDAEEERRKKRESG---------VEEEE-------ELKDSEINEILARNDEEMAV 1296
Query: 393 LTQM 396
LT+M
Sbjct: 1297 LTRM 1300
Score = 113 (44.8 bits), Expect = 1.2e-197, Sum P(2) = 1.2e-197
Identities = 31/97 (31%), Positives = 45/97 (46%)
Query: 305 AAARYK-LNMDE-KEYHRNNTARTQKLN--KAIINYHINAXXXXXXXXXXXXXXXXXXLM 360
A AR K +N +Y+R + ++L +I H N L
Sbjct: 601 AVARLKSMNKSAINQYNRRQDKKNKRLKFGHRLIATHTNLERDEQKRAEKKAKERLQALK 660
Query: 361 AEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMV 397
A DEE Y KL+DQ KD R+ LL QT+ ++ +LT+ V
Sbjct: 661 ANDEEAYIKLLDQTKDTRITHLLRQTNAFLDSLTRAV 697
Score = 37 (18.1 bits), Expect = 6.8e-104, Sum P(2) = 6.8e-104
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 847 IEEKYCQHIGQNN 859
+ +KYC+ +G N+
Sbjct: 1648 VTKKYCEIMGDNS 1660
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 1833 (650.3 bits), Expect = 1.1e-196, Sum P(2) = 1.1e-196
Identities = 370/648 (57%), Positives = 464/648 (71%)
Query: 519 EEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKT 578
E+ YY +AH EK+ +Q SI+V G LKEYQ++GLEWMVSLYNN+LNGILADEMGLGKT
Sbjct: 443 EKTDYYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKT 502
Query: 579 VQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQG 638
+Q+I+L+TYL E KK++GP+LVIVPLST++NW LEFEKWAPS N + YKG+P R +LQ
Sbjct: 503 IQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQH 562
Query: 639 RMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHR 698
+++ F+VLLTTYE+IIKDKS+LSK W MIIDEGHRMKN KL+ T++ +Y + +R
Sbjct: 563 QIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNR 622
Query: 699 VLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILI 756
++LTGTPLQN LPELWALLNF+LP IF S TFE WFN PFA TG EK+EL EEET+LI
Sbjct: 623 LILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLI 682
Query: 757 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 816
IRRLHKVLRPFLLRRLKKEVE LP+KVE +IKC +SGLQ+ LYQ + L +
Sbjct: 683 IRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTE 742
Query: 817 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDI-YRTSGKFE 875
G T +GG + L N I+QLRK+CNHPF+F +E G N D+ +R +GKFE
Sbjct: 743 GAT-KGGIKGLNNKIMQLRKICNHPFVFDEVE-------GVVNPSRGNSDLLFRVAGKFE 794
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
LLDR+LPKFK + HRVLMF QMTQ+M I+ED+ +D Y+RLDG+TK+E+R E+L FN
Sbjct: 795 LLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFN 854
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
P+S YF FLLSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LR
Sbjct: 855 APDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILR 914
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILH-QXXXXXXXXX 1054
LIT +SVEE IL A KL++D KVIQAG FD KST E+ FL+ ++ +
Sbjct: 915 LITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKA 974
Query: 1055 XXXXXTVNQLIARTEDELTLFQKMDAER---RKGETK--------PRLVEIKELPDWMVK 1103
+N +AR+ DE LF K+D ER + + K PRL+++ ELP +
Sbjct: 975 ELDDDELNDTLARSADEKILFDKIDKERMNQERADAKAQGLRVPPPRLIQLDELPKVFRE 1034
Query: 1104 DDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
D +E +GR RQ+K+V Y D LT++++L+A+
Sbjct: 1035 DIEE---------HFKKEDSEPLGR-IRQKKRVYYDDGLTEEQFLEAV 1072
Score = 1050 (374.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 211/336 (62%), Positives = 250/336 (74%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
TPLQN LPELWALLNF+LP IF S TFE WFN PFA TG EK+EL EEET+LIIRRLH
Sbjct: 628 TPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLH 687
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
KVLRPFLLRRLKKEVE LP+KVE +IKC +SGLQ+ LYQ + L +G T +
Sbjct: 688 KVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGAT-K 746
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDI-YRTSGKFELLDRI 177
GG + L N I+QLRK+CNHPF+F +E G N D+ +R +GKFELLDR+
Sbjct: 747 GGIKGLNNKIMQLRKICNHPFVFDEVE-------GVVNPSRGNSDLLFRVAGKFELLDRV 799
Query: 178 LPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESK 237
LPKFK + HRVLMF QMTQ+M I+ED+ +D Y+RLDG+TK+E+R E+L FN P+S
Sbjct: 800 LPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSD 859
Query: 238 YFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVN 297
YF FLLSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRLIT +
Sbjct: 860 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD 919
Query: 298 SVEERILAAARYKLNMDEK-----EYHRNNTARTQK 328
SVEE IL A KL++D K ++ +TA Q+
Sbjct: 920 SVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQE 955
Score = 94 (38.1 bits), Expect = 1.1e-196, Sum P(2) = 1.1e-196
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 359 LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMV 397
L + DEE Y KL+DQ KD R+ LL QT+ ++ +L++ V
Sbjct: 381 LKSNDEEAYLKLLDQTKDTRITQLLRQTNSFLDSLSEAV 419
Score = 41 (19.5 bits), Expect = 4.4e-191, Sum P(2) = 4.4e-191
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 360 MAEDEEGYRKLIDQKKDKRLAFLLSQTDE-YISNLTQ 395
M +DE+ K I++ +RLA L S +E Y+ L Q
Sbjct: 362 MEKDEQ---KRIERTAKQRLAALKSNDEEAYLKLLDQ 395
Score = 37 (18.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 626 YKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDK 659
YK R+ALQ +N++F ++ ++ DK
Sbjct: 1312 YKTLEEVRQALQTMFENARFYNEEGSWVYVDADK 1345
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 1791 (635.5 bits), Expect = 6.3e-192, Sum P(2) = 6.3e-192
Identities = 362/653 (55%), Positives = 462/653 (70%)
Query: 511 DDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILA 570
DDE + E+ YY++AH E+VT+Q SI+V G LKEYQ+KGL+WMVSL+NN+LNGILA
Sbjct: 749 DDEKR---EKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILA 805
Query: 571 DEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSP 630
DEMGLGKT+QTI+LLTYL+E KK GP+LVIVPLST++NW LEFEKWAPS + YKG+P
Sbjct: 806 DEMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTP 865
Query: 631 LARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLN 690
R+ +Q ++ F ++LTT+E++IKDK +L +I+W MIIDEGHRMKN + KL++TL
Sbjct: 866 NQRKVMQHDIRTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLT 925
Query: 691 TFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVEL 748
Y+S +R++LTGTPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+EL
Sbjct: 926 QNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIEL 985
Query: 749 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 808
EEET+L+IRRLHKVLRPFLLRRLKK+VE LP KVE ++KC S LQ LYQ + +
Sbjct: 986 TEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNM 1045
Query: 809 LLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY 868
L G A N I+QL+K+CNHPF+++ +E +I N+ I+
Sbjct: 1046 LYAGDPANGSVPVTIKNA-NNQIMQLKKICNHPFVYEEVENLINPNIETND------QIW 1098
Query: 869 RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG 928
R +GKFELLD++LPKFK T H+VL+F QMTQ+M I+ED+ +R Y+RLDG TK++DR
Sbjct: 1099 RVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRT 1158
Query: 929 ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQK 988
+LL+ FN P+S YF FLLSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQK
Sbjct: 1159 DLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 1218
Query: 989 NEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILH---- 1044
NEVR+LRLIT NSVEE IL A KL +D KVIQAG FD KST E+ L+ ++
Sbjct: 1219 NEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDE 1278
Query: 1045 --QXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAER---RKGETKP-RLVEIKELP 1098
Q +NQ+IAR E+EL +F+KMD ER K P RL +ELP
Sbjct: 1279 RRQKGGTDEEEEDLDDDELNQIIARNENELVVFRKMDEERYLATKNAPYPSRLYTEEELP 1338
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
+ + K D E ++ GRG+R+RK + Y D+LT+++WLK I
Sbjct: 1339 E-IYKIDPE---ELFKKEDVASEEY---GRGARERKILQYDDNLTEEQWLKKI 1384
Score = 997 (356.0 bits), Expect = 1.7e-99, P = 1.7e-99
Identities = 200/342 (58%), Positives = 248/342 (72%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
TPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+EL EEET+L+IRRLH
Sbjct: 939 TPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLH 998
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
KVLRPFLLRRLKK+VE LP KVE ++KC S LQ LYQ + +L G
Sbjct: 999 KVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVPV 1058
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
A N I+QL+K+CNHPF+++ +E +I N+ I+R +GKFELLD++L
Sbjct: 1059 TIKNA-NNQIMQLKKICNHPFVYEEVENLINPNIETND------QIWRVAGKFELLDKVL 1111
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
PKFK T H+VL+F QMTQ+M I+ED+ +R Y+RLDG TK++DR +LL+ FN P+S Y
Sbjct: 1112 PKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDY 1171
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
F FLLSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRLIT NS
Sbjct: 1172 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENS 1231
Query: 299 VEERILAAARYKLNMDEK-----EYHRNNTARTQK-LNKAII 334
VEE IL A KL +D K ++ +TA Q+ + +A+I
Sbjct: 1232 VEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALI 1273
Score = 91 (37.1 bits), Expect = 6.3e-192, Sum P(2) = 6.3e-192
Identities = 21/73 (28%), Positives = 31/73 (42%)
Query: 325 RTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLS 384
R + I N+H L + DEE Y KL+D KD R+ LL
Sbjct: 650 RLSRFMTKINNFHNQTAKEEQKKLEKMAKQRLQALKSNDEEAYLKLLDHTKDTRITHLLE 709
Query: 385 QTDEYISNLTQMV 397
QT++++ +L V
Sbjct: 710 QTNQFLDSLALAV 722
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 1791 (635.5 bits), Expect = 6.3e-192, Sum P(2) = 6.3e-192
Identities = 362/653 (55%), Positives = 462/653 (70%)
Query: 511 DDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILA 570
DDE + E+ YY++AH E+VT+Q SI+V G LKEYQ+KGL+WMVSL+NN+LNGILA
Sbjct: 749 DDEKR---EKIDYYNVAHRIKEEVTKQPSILVGGTLKEYQLKGLQWMVSLFNNHLNGILA 805
Query: 571 DEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSP 630
DEMGLGKT+QTI+LLTYL+E KK GP+LVIVPLST++NW LEFEKWAPS + YKG+P
Sbjct: 806 DEMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTP 865
Query: 631 LARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLN 690
R+ +Q ++ F ++LTT+E++IKDK +L +I+W MIIDEGHRMKN + KL++TL
Sbjct: 866 NQRKVMQHDIRTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNANSKLSETLT 925
Query: 691 TFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVEL 748
Y+S +R++LTGTPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+EL
Sbjct: 926 QNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIEL 985
Query: 749 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 808
EEET+L+IRRLHKVLRPFLLRRLKK+VE LP KVE ++KC S LQ LYQ + +
Sbjct: 986 TEEETLLVIRRLHKVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNM 1045
Query: 809 LLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY 868
L G A N I+QL+K+CNHPF+++ +E +I N+ I+
Sbjct: 1046 LYAGDPANGSVPVTIKNA-NNQIMQLKKICNHPFVYEEVENLINPNIETND------QIW 1098
Query: 869 RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG 928
R +GKFELLD++LPKFK T H+VL+F QMTQ+M I+ED+ +R Y+RLDG TK++DR
Sbjct: 1099 RVAGKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRT 1158
Query: 929 ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQK 988
+LL+ FN P+S YF FLLSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQK
Sbjct: 1159 DLLKSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQK 1218
Query: 989 NEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILH---- 1044
NEVR+LRLIT NSVEE IL A KL +D KVIQAG FD KST E+ L+ ++
Sbjct: 1219 NEVRILRLITENSVEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALIEKEDE 1278
Query: 1045 --QXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAER---RKGETKP-RLVEIKELP 1098
Q +NQ+IAR E+EL +F+KMD ER K P RL +ELP
Sbjct: 1279 RRQKGGTDEEEEDLDDDELNQIIARNENELVVFRKMDEERYLATKNAPYPSRLYTEEELP 1338
Query: 1099 DWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
+ + K D E ++ GRG+R+RK + Y D+LT+++WLK I
Sbjct: 1339 E-IYKIDPE---ELFKKEDVASEEY---GRGARERKILQYDDNLTEEQWLKKI 1384
Score = 997 (356.0 bits), Expect = 1.7e-99, P = 1.7e-99
Identities = 200/342 (58%), Positives = 248/342 (72%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
TPLQN LPELWALLNF+LP IF S +F++WFN PFA TG +K+EL EEET+L+IRRLH
Sbjct: 939 TPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLH 998
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
KVLRPFLLRRLKK+VE LP KVE ++KC S LQ LYQ + +L G
Sbjct: 999 KVLRPFLLRRLKKDVEKDLPNKVEKVVKCKSSALQSKLYQQMLRYNMLYAGDPANGSVPV 1058
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
A N I+QL+K+CNHPF+++ +E +I N+ I+R +GKFELLD++L
Sbjct: 1059 TIKNA-NNQIMQLKKICNHPFVYEEVENLINPNIETND------QIWRVAGKFELLDKVL 1111
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
PKFK T H+VL+F QMTQ+M I+ED+ +R Y+RLDG TK++DR +LL+ FN P+S Y
Sbjct: 1112 PKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDY 1171
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
F FLLSTRAGGLGLNLQ ADTVIIFD+DWNPHQDLQAQDRAHRIGQKNEVR+LRLIT NS
Sbjct: 1172 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENS 1231
Query: 299 VEERILAAARYKLNMDEK-----EYHRNNTARTQK-LNKAII 334
VEE IL A KL +D K ++ +TA Q+ + +A+I
Sbjct: 1232 VEEMILERAHKKLEIDGKVIQAGKFDNKSTAEEQEAMLRALI 1273
Score = 91 (37.1 bits), Expect = 6.3e-192, Sum P(2) = 6.3e-192
Identities = 21/73 (28%), Positives = 31/73 (42%)
Query: 325 RTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLS 384
R + I N+H L + DEE Y KL+D KD R+ LL
Sbjct: 650 RLSRFMTKINNFHNQTAKEEQKKLEKMAKQRLQALKSNDEEAYLKLLDHTKDTRITHLLE 709
Query: 385 QTDEYISNLTQMV 397
QT++++ +L V
Sbjct: 710 QTNQFLDSLALAV 722
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 1708 (606.3 bits), Expect = 4.6e-182, Sum P(2) = 4.6e-182
Identities = 341/599 (56%), Positives = 436/599 (72%)
Query: 522 TYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQT 581
+YYS AH+ E + EQ +++ GKLK YQ++GL+WMVSLYNN LNGILADEMGLGKT+QT
Sbjct: 1687 SYYSKAHSIQEDIIEQPALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQT 1746
Query: 582 IALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRA-LQGRM 640
IAL++YL+E KKN GP+LV+VPLSTLSNW EF KWAP V Y G AR++ + +
Sbjct: 1747 IALVSYLIEVKKNNGPFLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPARKSKFEEFI 1806
Query: 641 KNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVL 700
+FN ++TTYE+IIKDK+ LSKI+W +I+DEGHRMKN+ KL+ L T Y+S +R+L
Sbjct: 1807 APGQFNAVVTTYEYIIKDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSSRYRLL 1866
Query: 701 LTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRL 760
LTGTPLQN LPELWALLNFLLP+IF FEQWFNAPFA TGEK+E+NEEE +LII+RL
Sbjct: 1867 LTGTPLQNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRL 1926
Query: 761 HKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI--LLTDGSEKGK 818
HKVLRPFLLRRLKKEVE+QLP+KVE ++KCDMS Q +Y + +G+ L + G G
Sbjct: 1927 HKVLRPFLLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKLASSGGADGN 1986
Query: 819 TGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLD 878
A+ LKNT VQLRK+CNHP++F +++Y +I N + R +GKF+LLD
Sbjct: 1987 PKL--AKGLKNTYVQLRKICNHPYLFY--DDEY--NIDDN--------LIRYAGKFDLLD 2032
Query: 879 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 938
R+LPK K HRVL+F QMTQL+ ILE +F ++D+ +LRLDG+TKS++RG LL FN P
Sbjct: 2033 RLLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFNAPN 2092
Query: 939 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 998
S+YFIF+LSTRAGGLGLNLQ ADTVIIFDSDWNP DLQAQDRAHRIGQK VRVLRL+T
Sbjct: 2093 SEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVT 2152
Query: 999 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXXXX 1058
+SVEE ILA A +K +D+K+IQAG F+ KS S+R + L+ ++ Q
Sbjct: 2153 AHSVEESILARANFKKELDKKIIQAGQFNNKSNRSDRKKMLEDLMTQDETAEMEKQTVPT 2212
Query: 1059 XT-VNQLIARTEDELTLFQKMDAER------------RKGETKPRLVEIKELPDWMVKD 1104
+ +N++IAR+ +E L++ MD ER +KGE K RL + E+P W+ K+
Sbjct: 2213 DSQINEMIARSPEEFELYENMDKERMEIDQKKWDEAGKKGEAK-RLSQEDEIPSWITKE 2270
Score = 1012 (361.3 bits), Expect = 2.4e-100, P = 2.4e-100
Identities = 201/318 (63%), Positives = 244/318 (76%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN LPELWALLNFLLP+IF FEQWFNAPFA TGEK+E+NEEE +LII+RLHKV
Sbjct: 1870 TPLQNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRLHKV 1929
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI--LLTDGSEKGKTGE 118
LRPFLLRRLKKEVE+QLP+KVE ++KCDMS Q +Y + +G+ L + G G
Sbjct: 1930 LRPFLLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKLASSGGADGNPKL 1989
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
A+ LKNT VQLRK+CNHP++F +++Y +I N + R +GKF+LLDR+L
Sbjct: 1990 --AKGLKNTYVQLRKICNHPYLFY--DDEY--NIDDN--------LIRYAGKFDLLDRLL 2035
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
PK K HRVL+F QMTQL+ ILE +F ++D+ +LRLDG+TKS++RG LL FN P S+Y
Sbjct: 2036 PKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFNAPNSEY 2095
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
FIF+LSTRAGGLGLNLQ ADTVIIFDSDWNP DLQAQDRAHRIGQK VRVLRL+T +S
Sbjct: 2096 FIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVTAHS 2155
Query: 299 VEERILAAARYKLNMDEK 316
VEE ILA A +K +D+K
Sbjct: 2156 VEESILARANFKKELDKK 2173
Score = 108 (43.1 bits), Expect = 4.6e-182, Sum P(2) = 4.6e-182
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 316 KEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKK 375
KEYH N + +K+ K + Y I L DE Y KL++Q K
Sbjct: 1316 KEYHANKMTKIKKMTKRVTAYFILQEKKEQQQREREERERLRALKTNDESKYLKLLEQTK 1375
Query: 376 DKRLAFLLSQTDEYISNLTQMV 397
++RL L QT+E++ ++ ++
Sbjct: 1376 NQRLRELFDQTNEFLDKISHLL 1397
Score = 45 (20.9 bits), Expect = 2.1e-175, Sum P(2) = 2.1e-175
Identities = 39/191 (20%), Positives = 82/191 (42%)
Query: 66 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLL---YQHLHNRGILLTDGSEKGKTGEGGAR 122
L+ L E P +E++++C + + +L+ ++L+ L DG+ + K E +
Sbjct: 1195 LKSLPMETLIPKPMDIEFMLECKRNLVSQLISDKLEYLYESIPTLEDGTIE-KLQET-IQ 1252
Query: 123 ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKF-ELLDRILPKF 181
+ ++++ +K + I + + + +F + L +IL
Sbjct: 1253 YKQLSLLEYQKQLRREVLDAEISKSKLKKSKDLKQKLDQQQSNEEKNRFKDFLGQILNHS 1312
Query: 182 KETK----HRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLR--KFNEPE 235
KE K +++ +MT+ +T YFI ++ + + + + E LR K N+ E
Sbjct: 1313 KEFKEYHANKMTKIKKMTKRVTA---YFILQE----KKEQQQREREERERLRALKTND-E 1364
Query: 236 SKYFIFLLSTR 246
SKY L T+
Sbjct: 1365 SKYLKLLEQTK 1375
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 1486 (528.2 bits), Expect = 2.5e-163, Sum P(3) = 2.5e-163
Identities = 302/604 (50%), Positives = 410/604 (67%)
Query: 520 EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTV 579
++T +A + V EQ +M GKLKEYQ+ GLEW++SLY NLNGILADEMGLGKTV
Sbjct: 598 QSTTTILAKKSNNLVIEQPDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTV 657
Query: 580 QTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGR 639
QTIA +++L E+ P+LV+ PLST+SNWV EF +W+P +V+ YKG RR
Sbjct: 658 QTIAFISFLYERMNVREPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDERRETART 717
Query: 640 MKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+ + F V++T++E+IIKD+ L ++ W +IIDEGHR+KN + KL+ L Y+S +R+
Sbjct: 718 IPRNAFCVVITSFEYIIKDRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQ-YHSRNRL 776
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VELNEEETILIIR 758
LLTGTPLQN L ELWALLNFLLP+IF S TF+ WFNAPF G+ + +NEEE+++II
Sbjct: 777 LLTGTPLQNDLGELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEEESLIIIN 836
Query: 759 RLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKG 817
RLH+VLR FLLRRLK +VESQLP+K E +IKC+MS LQ +Y+ L G+L D S++G
Sbjct: 837 RLHQVLRFFLLRRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEG 896
Query: 818 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELL 877
++G + N + QL+K+CNHP++F++ + I + D+ RTSGKF+ +
Sbjct: 897 RSGRLKMKGFNNIVKQLQKICNHPYLFKDEWD-----INE--------DLIRTSGKFDTM 943
Query: 878 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 937
D+IL K +KHRVL+F QMT+++ ++E+YF +++++LRLDG+TK E+R L+ ++N P
Sbjct: 944 DQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEWNRP 1003
Query: 938 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 997
+S ++IF+LST AGGLG+NLQ ADTVIIFDSDWNP DLQAQDR HRIGQ N V V RLI
Sbjct: 1004 DSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLI 1063
Query: 998 TVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXXX 1057
+ NS+EE+IL A KL +D K+IQAGMF+ S ER L+ LH
Sbjct: 1064 SANSIEEKILGRATDKLEIDAKIIQAGMFNTHSNDQERRAKLEQFLHGFPNNTLDEVPVD 1123
Query: 1058 XXTVNQLIARTEDELTLFQKMDAERRKGET----------KPRLVEIKELPDWM----VK 1103
+N+LIAR + E FQ+MD ER K + KPRL+ KELP+W+ V
Sbjct: 1124 LKEINKLIARDDFEFKQFQEMDKERLKVDQANSKKTRQPIKPRLMIEKELPEWVLATPVT 1183
Query: 1104 DDDE 1107
D DE
Sbjct: 1184 DKDE 1187
Score = 877 (313.8 bits), Expect = 1.1e-86, P = 1.1e-86
Identities = 178/348 (51%), Positives = 243/348 (69%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VELNEEETILIIRRLHK 59
TPLQN L ELWALLNFLLP+IF S TF+ WFNAPF G+ + +NEEE+++II RLH+
Sbjct: 781 TPLQNDLGELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEEESLIIINRLHQ 840
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGE 118
VLR FLLRRLK +VESQLP+K E +IKC+MS LQ +Y+ L G+L D S++G++G
Sbjct: 841 VLRFFLLRRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEGRSGR 900
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
+ N + QL+K+CNHP++F++ + I + D+ RTSGKF+ +D+IL
Sbjct: 901 LKMKGFNNIVKQLQKICNHPYLFKDEWD-----INE--------DLIRTSGKFDTMDQIL 947
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
K +KHRVL+F QMT+++ ++E+YF +++++LRLDG+TK E+R L+ ++N P+S +
Sbjct: 948 TKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEWNRPDSPF 1007
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
+IF+LST AGGLG+NLQ ADTVIIFDSDWNP DLQAQDR HRIGQ N V V RLI+ NS
Sbjct: 1008 WIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLISANS 1067
Query: 299 VEERILAAARYKLNMDEK-------EYHRNNTARTQKLNKAIINYHIN 339
+EE+IL A KL +D K H N+ R KL + + + N
Sbjct: 1068 IEEKILGRATDKLEIDAKIIQAGMFNTHSNDQERRAKLEQFLHGFPNN 1115
Score = 100 (40.3 bits), Expect = 2.5e-163, Sum P(3) = 2.5e-163
Identities = 28/85 (32%), Positives = 40/85 (47%)
Query: 314 DEKEYHRNNTA-RTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLID 372
D K +H NN Q + KAI YH L A D EGYR L+
Sbjct: 451 DFKVFHSNNEKFLRQNVIKAIHRYH---KEKEKREIERLSKERIRLLKARDTEGYRDLLA 507
Query: 373 QKKDKRLAFLLSQTDEYISNLTQMV 397
+ K++RL LL +TD +S++ Q++
Sbjct: 508 KTKNERLEMLLGETDSLLSSIHQLM 532
Score = 48 (22.0 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 10/47 (21%), Positives = 25/47 (53%)
Query: 38 TTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYI 84
T E++E+ ET ++ +H+++ + +E+E +L + E +
Sbjct: 509 TKNERLEMLLGETDSLLSSIHQLMEKEQTEKRARELEEELKQNEEQL 555
Score = 41 (19.5 bits), Expect = 2.5e-163, Sum P(3) = 2.5e-163
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 6 KLPELWALLNFLLPSIFKSC--STFEQWFNAPFA--TTGEKVELNEEETILIIRRLHKVL 61
K E+ L + P I+KSC ++ E P A + E+ + + I I L ++
Sbjct: 284 KEKEIQRLRDLQKPIIYKSCIPASVENIKGLPEAIHSINEREMKIQAKVITRIDELKEIP 343
Query: 62 RPFLLR--RLKKEVESQ 76
+L R++ E+ES+
Sbjct: 344 THYLPTDVRIRSEIESK 360
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 1467 (521.5 bits), Expect = 8.3e-155, Sum P(4) = 8.3e-155
Identities = 302/591 (51%), Positives = 396/591 (67%)
Query: 506 EKKTEDDEYKDAGEE-ATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNN 564
E + E D+ K E YY +AH+ E + EQ S +V GKL+EYQ+ GL W+VSLYNN+
Sbjct: 713 ENEDESDQAKHYLESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLVSLYNNH 772
Query: 565 LNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVV 624
LNGILADEMGLGKTVQ I+L+ YLME K + GP+LV+VP S L W E WAPS + +
Sbjct: 773 LNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKI 832
Query: 625 AYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIK--DKSVLSKIQWKCMIIDEGHRMKNH 681
Y G+P RR L + ++ + KFNVLLTTYE+++ D+ LSKI W +IIDEGHR+KN
Sbjct: 833 VYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNA 892
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
CKL L Y SSHR+LLTGTPLQN L ELWALLNFLLP+IF S F QWFN PF +
Sbjct: 893 SCKLNADLK-HYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQS 951
Query: 742 TGEK-VE---LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQK 797
GE E L+EEE +LII RLH+VLRPF+LRRLK +VE++LPEK+E +I+C+ S QK
Sbjct: 952 NGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQK 1011
Query: 798 LLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQ 857
LL + + + G G +RA+ N++++LR +CNHP++ Q E+
Sbjct: 1012 LLMKRVEDN---------LGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEV------ 1056
Query: 858 NNTVVSG--PDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSY 915
NN + P I R GK E+LDR+LPK K T HRVL F MT+L+ ++EDY + + Y
Sbjct: 1057 NNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKY 1116
Query: 916 LRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQD 975
LRLDG T DRG L+ FN+ S +FIFLLS RAGG+G+NLQAADTVI+FD+DWNP D
Sbjct: 1117 LRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVD 1176
Query: 976 LQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSER 1035
LQAQ RAHRIGQK +V VLR TVNSVEE++ A+A +KL + + I AG FD ++ +R
Sbjct: 1177 LQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFDNNTSAEDR 1236
Query: 1036 HEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGE 1086
E+L+++L + +N LIAR E E+ +F+ +D +R++ E
Sbjct: 1237 KEYLESLLRESKKEEDAPVLDDDA-LNDLIARRESEIDIFESIDKQRKENE 1286
Score = 837 (299.7 bits), Expect = 5.5e-84, Sum P(3) = 5.5e-84
Identities = 175/334 (52%), Positives = 226/334 (67%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VE---LNEEETILIIRR 56
TPLQN L ELWALLNFLLP+IF S F QWFN PF + GE E L+EEE +LII R
Sbjct: 914 TPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINR 973
Query: 57 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
LH+VLRPF+LRRLK +VE++LPEK+E +I+C+ S QKLL + + + G
Sbjct: 974 LHQVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQKLLMKRVEDN---------LGSI 1024
Query: 117 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSG--PDIYRTSGKFELL 174
G +RA+ N++++LR +CNHP++ Q E+ NN + P I R GK E+L
Sbjct: 1025 GNAKSRAVHNSVMELRNICNHPYLSQLHSEEV------NNIIPKHFLPPIVRLCGKLEML 1078
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
DR+LPK K T HRVL F MT+L+ ++EDY + + YLRLDG T DRG L+ FN+
Sbjct: 1079 DRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKS 1138
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
S +FIFLLS RAGG+G+NLQAADTVI+FD+DWNP DLQAQ RAHRIGQK +V VLR
Sbjct: 1139 GSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFE 1198
Query: 295 TVNSVEERILAAARYKLNMDEKE----YHRNNTA 324
TVNSVEE++ A+A +KL + + + NNT+
Sbjct: 1199 TVNSVEEQVRASAEHKLGVANQSITAGFFDNNTS 1232
Score = 65 (27.9 bits), Expect = 8.3e-155, Sum P(4) = 8.3e-155
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 359 LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL 393
L D EGY +++ K R+ LL +T++Y+ L
Sbjct: 645 LKINDVEGYLRMVQDAKSDRVKQLLKETEKYLQKL 679
Score = 51 (23.0 bits), Expect = 8.3e-155, Sum P(4) = 8.3e-155
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 1127 GRGSRQRKQVDYTDSLTDQEWLK 1149
GRG R R+ Y + LT++E+ K
Sbjct: 1357 GRGKRAREVRSYEEKLTEEEFEK 1379
Score = 38 (18.4 bits), Expect = 8.3e-155, Sum P(4) = 8.3e-155
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1080 AERRKGETKPRLVEIKELPDWMVKDDDEVEN 1110
AE RK + L E K+ D V DDD + +
Sbjct: 1233 AEDRKEYLESLLRESKKEEDAPVLDDDALND 1263
Score = 37 (18.1 bits), Expect = 9.8e-82, Sum P(2) = 9.8e-82
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 687 QTLNTFYNSSHR 698
QTLN NSS R
Sbjct: 1639 QTLNVLENSSER 1650
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 860 (307.8 bits), Expect = 1.1e-120, Sum P(3) = 1.1e-120
Identities = 171/357 (47%), Positives = 238/357 (66%)
Query: 506 EKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNL 565
E T+ YK+A E YY+I+H EKV +Q SI++ G+L +YQ++GLEW+VSLYNNNL
Sbjct: 847 ENNTKICNYKNAREN--YYNISHVVKEKV-KQPSILIGGELMKYQLEGLEWLVSLYNNNL 903
Query: 566 NGILADEMGLGKTVQTIALLTYLMEKKKNLG-PYLVIVPLSTLSNWVLEFEKWAPSANVV 624
+GILADEMGLGKT+QTI+L YL E K N+ L+IVPLSTL NW+ EF +W PS NV+
Sbjct: 904 HGILADEMGLGKTIQTISLFAYLKEFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVI 963
Query: 625 AYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCK 684
Y+G+ L R+ + ++ F++ +TT++ +IK+KS L KI W +++DEGHRMKN+ +
Sbjct: 964 TYRGNKLERKHIAKKLLEQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSR 1023
Query: 685 LTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE 744
L+ F S +R+LLTGTPLQN L ELW+LLNFLLP IF SC FE+WF +
Sbjct: 1024 FHVFLSEF-KSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKD 1082
Query: 745 KVE-LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E + EEE +LII RLH VL PF+LRR+KK+V LP+K EY I ++S QK+LY+ +
Sbjct: 1083 VYEHITEEEQLLIINRLHSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQI 1142
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF---QNIEEKYCQHIGQ 857
+G + G + +N ++QLRK+ NHP++F NI+E + G+
Sbjct: 1143 QTKGF-----KQVNHNGSITTKIFQNIVMQLRKIVNHPYLFLYDYNIDENIIKCSGK 1194
Score = 329 (120.9 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 70/158 (44%), Positives = 96/158 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVE-LNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP IF SC FE+WF + E + EEE +LII RLH
Sbjct: 1042 TPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHS 1101
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
VL PF+LRR+KK+V LP+K EY I ++S QK+LY+ + +G + G
Sbjct: 1102 VLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGF-----KQVNHNGSI 1156
Query: 120 GARALKNTIVQLRKLCNHPFMF---QNIEEKYCQHIGQ 154
+ +N ++QLRK+ NHP++F NI+E + G+
Sbjct: 1157 TTKIFQNIVMQLRKIVNHPYLFLYDYNIDENIIKCSGK 1194
Score = 327 (120.2 bits), Expect = 1.1e-120, Sum P(3) = 1.1e-120
Identities = 69/144 (47%), Positives = 94/144 (65%)
Query: 943 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 1002
IF+LSTR+G LGLNLQ ADTVIIFDSD+NPHQD+QA R HRIGQKN V+V R IT++ V
Sbjct: 1405 IFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFITLSGV 1464
Query: 1003 EERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXXXXXTVN 1062
EE + A++KL++++KVIQAG+F++ +R L+ I+ + +N
Sbjct: 1465 EELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKLKDIIQRNQKNDMTTHPTNPLLLN 1524
Query: 1063 QLIARTEDELTLFQKMDAERRKGE 1086
+ R E+EL F D +R GE
Sbjct: 1525 YYMKRNEEELEYFLDFD-KRYFGE 1547
Score = 263 (97.6 bits), Expect = 7.2e-47, Sum P(2) = 7.2e-47
Identities = 50/77 (64%), Positives = 64/77 (83%)
Query: 240 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 299
IF+LSTR+G LGLNLQ ADTVIIFDSD+NPHQD+QA R HRIGQKN V+V R IT++ V
Sbjct: 1405 IFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFITLSGV 1464
Query: 300 EERILAAARYKLNMDEK 316
EE + A++KL++++K
Sbjct: 1465 EELVFKKAQHKLSINDK 1481
Score = 222 (83.2 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 52/137 (37%), Positives = 79/137 (57%)
Query: 799 LYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN 858
LYQ + + I + G + +N ++QLRK+ NHP++F Y +I +N
Sbjct: 1133 LYQKILYKQIQTKGFKQVNHNGSITTKIFQNIVMQLRKIVNHPYLFL-----YDYNIDEN 1187
Query: 859 NTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRL 918
I + SGKFE+LDR+LPK + KH+VL+F QMT+LM IL DY +R + Y RL
Sbjct: 1188 --------IIKCSGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRL 1239
Query: 919 DGTTKSEDRGELLRKFN 935
DG ++R +++ +FN
Sbjct: 1240 DGNIGLQERKKIIDQFN 1256
Score = 222 (83.2 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 52/137 (37%), Positives = 79/137 (57%)
Query: 96 LYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN 155
LYQ + + I + G + +N ++QLRK+ NHP++F Y +I +N
Sbjct: 1133 LYQKILYKQIQTKGFKQVNHNGSITTKIFQNIVMQLRKIVNHPYLFL-----YDYNIDEN 1187
Query: 156 NTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRL 215
I + SGKFE+LDR+LPK + KH+VL+F QMT+LM IL DY +R + Y RL
Sbjct: 1188 --------IIKCSGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRL 1239
Query: 216 DGTTKSEDRGELLRKFN 232
DG ++R +++ +FN
Sbjct: 1240 DGNIGLQERKKIIDQFN 1256
Score = 75 (31.5 bits), Expect = 1.1e-120, Sum P(3) = 1.1e-120
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 359 LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMV 397
L D E Y KLI K+KRL LL T+++++N+++ V
Sbjct: 737 LKDNDIEAYMKLIKTAKNKRLQELLDVTEQFLNNMSKCV 775
Score = 41 (19.5 bits), Expect = 4.1e-41, Sum P(3) = 4.1e-41
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 182 KETKHRVLMFCQMTQLMTILEDYFIWR-DFSYLRLDGTTKSEDRGELLRKF-NEPESKYF 239
K+ + C T + I E F+ + ++Y+ +D + ++ F +E +SKY
Sbjct: 977 KKLLEQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYR 1036
Query: 240 IFLLST 245
I L T
Sbjct: 1037 ILLTGT 1042
Score = 37 (18.1 bits), Expect = 3.3e-90, Sum P(3) = 3.3e-90
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 852 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRV 891
C IGQ N VV SG EL+ FK+ +H++
Sbjct: 1444 CHRIGQKN-VVKVFRFITLSGVEELV------FKKAQHKL 1476
Score = 37 (18.1 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 149 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRV 188
C IGQ N VV SG EL+ FK+ +H++
Sbjct: 1444 CHRIGQKN-VVKVFRFITLSGVEELV------FKKAQHKL 1476
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 860 (307.8 bits), Expect = 1.1e-120, Sum P(3) = 1.1e-120
Identities = 171/357 (47%), Positives = 238/357 (66%)
Query: 506 EKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNL 565
E T+ YK+A E YY+I+H EKV +Q SI++ G+L +YQ++GLEW+VSLYNNNL
Sbjct: 847 ENNTKICNYKNAREN--YYNISHVVKEKV-KQPSILIGGELMKYQLEGLEWLVSLYNNNL 903
Query: 566 NGILADEMGLGKTVQTIALLTYLMEKKKNLG-PYLVIVPLSTLSNWVLEFEKWAPSANVV 624
+GILADEMGLGKT+QTI+L YL E K N+ L+IVPLSTL NW+ EF +W PS NV+
Sbjct: 904 HGILADEMGLGKTIQTISLFAYLKEFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVI 963
Query: 625 AYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCK 684
Y+G+ L R+ + ++ F++ +TT++ +IK+KS L KI W +++DEGHRMKN+ +
Sbjct: 964 TYRGNKLERKHIAKKLLEQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSR 1023
Query: 685 LTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE 744
L+ F S +R+LLTGTPLQN L ELW+LLNFLLP IF SC FE+WF +
Sbjct: 1024 FHVFLSEF-KSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKD 1082
Query: 745 KVE-LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E + EEE +LII RLH VL PF+LRR+KK+V LP+K EY I ++S QK+LY+ +
Sbjct: 1083 VYEHITEEEQLLIINRLHSVLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQI 1142
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF---QNIEEKYCQHIGQ 857
+G + G + +N ++QLRK+ NHP++F NI+E + G+
Sbjct: 1143 QTKGF-----KQVNHNGSITTKIFQNIVMQLRKIVNHPYLFLYDYNIDENIIKCSGK 1194
Score = 329 (120.9 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 70/158 (44%), Positives = 96/158 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVE-LNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP IF SC FE+WF + E + EEE +LII RLH
Sbjct: 1042 TPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHITEEEQLLIINRLHS 1101
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
VL PF+LRR+KK+V LP+K EY I ++S QK+LY+ + +G + G
Sbjct: 1102 VLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQKILYKQIQTKGF-----KQVNHNGSI 1156
Query: 120 GARALKNTIVQLRKLCNHPFMF---QNIEEKYCQHIGQ 154
+ +N ++QLRK+ NHP++F NI+E + G+
Sbjct: 1157 TTKIFQNIVMQLRKIVNHPYLFLYDYNIDENIIKCSGK 1194
Score = 327 (120.2 bits), Expect = 1.1e-120, Sum P(3) = 1.1e-120
Identities = 69/144 (47%), Positives = 94/144 (65%)
Query: 943 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 1002
IF+LSTR+G LGLNLQ ADTVIIFDSD+NPHQD+QA R HRIGQKN V+V R IT++ V
Sbjct: 1405 IFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFITLSGV 1464
Query: 1003 EERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXXXXXTVN 1062
EE + A++KL++++KVIQAG+F++ +R L+ I+ + +N
Sbjct: 1465 EELVFKKAQHKLSINDKVIQAGLFNKIYNDEDRQNKLKDIIQRNQKNDMTTHPTNPLLLN 1524
Query: 1063 QLIARTEDELTLFQKMDAERRKGE 1086
+ R E+EL F D +R GE
Sbjct: 1525 YYMKRNEEELEYFLDFD-KRYFGE 1547
Score = 263 (97.6 bits), Expect = 7.2e-47, Sum P(2) = 7.2e-47
Identities = 50/77 (64%), Positives = 64/77 (83%)
Query: 240 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 299
IF+LSTR+G LGLNLQ ADTVIIFDSD+NPHQD+QA R HRIGQKN V+V R IT++ V
Sbjct: 1405 IFILSTRSGSLGLNLQTADTVIIFDSDFNPHQDIQAMCRCHRIGQKNVVKVFRFITLSGV 1464
Query: 300 EERILAAARYKLNMDEK 316
EE + A++KL++++K
Sbjct: 1465 EELVFKKAQHKLSINDK 1481
Score = 222 (83.2 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 52/137 (37%), Positives = 79/137 (57%)
Query: 799 LYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN 858
LYQ + + I + G + +N ++QLRK+ NHP++F Y +I +N
Sbjct: 1133 LYQKILYKQIQTKGFKQVNHNGSITTKIFQNIVMQLRKIVNHPYLFL-----YDYNIDEN 1187
Query: 859 NTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRL 918
I + SGKFE+LDR+LPK + KH+VL+F QMT+LM IL DY +R + Y RL
Sbjct: 1188 --------IIKCSGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRL 1239
Query: 919 DGTTKSEDRGELLRKFN 935
DG ++R +++ +FN
Sbjct: 1240 DGNIGLQERKKIIDQFN 1256
Score = 222 (83.2 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 52/137 (37%), Positives = 79/137 (57%)
Query: 96 LYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN 155
LYQ + + I + G + +N ++QLRK+ NHP++F Y +I +N
Sbjct: 1133 LYQKILYKQIQTKGFKQVNHNGSITTKIFQNIVMQLRKIVNHPYLFL-----YDYNIDEN 1187
Query: 156 NTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRL 215
I + SGKFE+LDR+LPK + KH+VL+F QMT+LM IL DY +R + Y RL
Sbjct: 1188 --------IIKCSGKFEVLDRMLPKLLKFKHKVLIFSQMTKLMNILCDYLEFRGYKYHRL 1239
Query: 216 DGTTKSEDRGELLRKFN 232
DG ++R +++ +FN
Sbjct: 1240 DGNIGLQERKKIIDQFN 1256
Score = 75 (31.5 bits), Expect = 1.1e-120, Sum P(3) = 1.1e-120
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 359 LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMV 397
L D E Y KLI K+KRL LL T+++++N+++ V
Sbjct: 737 LKDNDIEAYMKLIKTAKNKRLQELLDVTEQFLNNMSKCV 775
Score = 41 (19.5 bits), Expect = 4.1e-41, Sum P(3) = 4.1e-41
Identities = 16/66 (24%), Positives = 30/66 (45%)
Query: 182 KETKHRVLMFCQMTQLMTILEDYFIWR-DFSYLRLDGTTKSEDRGELLRKF-NEPESKYF 239
K+ + C T + I E F+ + ++Y+ +D + ++ F +E +SKY
Sbjct: 977 KKLLEQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYR 1036
Query: 240 IFLLST 245
I L T
Sbjct: 1037 ILLTGT 1042
Score = 37 (18.1 bits), Expect = 3.3e-90, Sum P(3) = 3.3e-90
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 852 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRV 891
C IGQ N VV SG EL+ FK+ +H++
Sbjct: 1444 CHRIGQKN-VVKVFRFITLSGVEELV------FKKAQHKL 1476
Score = 37 (18.1 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 149 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRV 188
C IGQ N VV SG EL+ FK+ +H++
Sbjct: 1444 CHRIGQKN-VVKVFRFITLSGVEELV------FKKAQHKL 1476
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 1162 (414.1 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 268/604 (44%), Positives = 359/604 (59%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 150 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 206
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 266
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 267 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 326
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 327 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 378
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 379 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK--- 432
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 865
IL+ D G+ L N ++QLRK CNHP++F E G T +
Sbjct: 433 --ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDE 482
Query: 866 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 925
I SGK +LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E
Sbjct: 483 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 542
Query: 926 DR--G----------ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 973
+R G E + FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP
Sbjct: 543 ERENGFLQIYFRRRREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 602
Query: 974 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTG 1032
DLQA DRAHRIGQK VRV RLIT N+VEERI+ A KL +D VIQ G + DQ+S
Sbjct: 603 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 662
Query: 1033 SERHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGETKPRLV 1092
+ E LQ I H ++L ED TL ++ ER+ E RL
Sbjct: 663 MAKEEMLQMIRHGATHVFASKE-------SELT--DEDITTLLER--GERKTAEMNERLQ 711
Query: 1093 EIKE 1096
++ E
Sbjct: 712 KMGE 715
Score = 679 (244.1 bits), Expect = 4.2e-66, Sum P(2) = 4.2e-66
Identities = 157/326 (48%), Positives = 196/326 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 344 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 393
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 394 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSAGKMD 448
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L N ++QLRK CNHP++F E G T + I SGK +LD++L K
Sbjct: 449 KMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMVVLDKLLAK 500
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDR--G----------ELL 228
KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R G E +
Sbjct: 501 LKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENGFLQIYFRRRREAI 560
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK V
Sbjct: 561 EAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 620
Query: 289 RVLRLITVNSVEERILAAARYKLNMD 314
RV RLIT N+VEERI+ A KL +D
Sbjct: 621 RVFRLITDNTVEERIVERAEIKLRLD 646
Score = 65 (27.9 bits), Expect = 4.2e-66, Sum P(2) = 4.2e-66
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 906 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 962
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 963 KNYTEEEDRFLICMLHK 979
Score = 40 (19.1 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 1162 (414.1 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 268/604 (44%), Positives = 359/604 (59%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 150 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 206
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 266
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 267 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 326
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 327 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 378
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 379 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK--- 432
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 865
IL+ D G+ L N ++QLRK CNHP++F E G T +
Sbjct: 433 --ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDE 482
Query: 866 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 925
I SGK +LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E
Sbjct: 483 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 542
Query: 926 DR----------G--ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 973
+R G E + FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP
Sbjct: 543 EREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 602
Query: 974 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTG 1032
DLQA DRAHRIGQK VRV RLIT N+VEERI+ A KL +D VIQ G + DQ+S
Sbjct: 603 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 662
Query: 1033 SERHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGETKPRLV 1092
+ E LQ I H ++L ED TL ++ ER+ E RL
Sbjct: 663 MAKEEMLQMIRHGATHVFASKE-------SELT--DEDITTLLER--GERKTAEMNERLQ 711
Query: 1093 EIKE 1096
++ E
Sbjct: 712 KMGE 715
Score = 679 (244.1 bits), Expect = 4.2e-66, Sum P(2) = 4.2e-66
Identities = 157/326 (48%), Positives = 196/326 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 344 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 393
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 394 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSAGKMD 448
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L N ++QLRK CNHP++F E G T + I SGK +LD++L K
Sbjct: 449 KMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMVVLDKLLAK 500
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDR----------G--ELL 228
KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R G E +
Sbjct: 501 LKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAI 560
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK V
Sbjct: 561 EAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 620
Query: 289 RVLRLITVNSVEERILAAARYKLNMD 314
RV RLIT N+VEERI+ A KL +D
Sbjct: 621 RVFRLITDNTVEERIVERAEIKLRLD 646
Score = 65 (27.9 bits), Expect = 4.2e-66, Sum P(2) = 4.2e-66
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 906 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 962
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 963 KNYTEEEDRFLICMLHK 979
Score = 40 (19.1 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 1162 (414.1 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 268/604 (44%), Positives = 359/604 (59%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 150 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 206
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 266
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 267 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 326
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 327 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 378
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 379 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK--- 432
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 865
IL+ D G+ L N ++QLRK CNHP++F E G T +
Sbjct: 433 --ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDE 482
Query: 866 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 925
I SGK +LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E
Sbjct: 483 HIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 542
Query: 926 DR----------G--ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 973
+R G E + FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP
Sbjct: 543 EREDKFLEVELLGQREAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 602
Query: 974 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTG 1032
DLQA DRAHRIGQK VRV RLIT N+VEERI+ A KL +D VIQ G + DQ+S
Sbjct: 603 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 662
Query: 1033 SERHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGETKPRLV 1092
+ E LQ I H ++L ED TL ++ ER+ E RL
Sbjct: 663 MAKEEMLQMIRHGATHVFASKE-------SELT--DEDITTLLER--GERKTAEMNERLQ 711
Query: 1093 EIKE 1096
++ E
Sbjct: 712 KMGE 715
Score = 679 (244.1 bits), Expect = 3.4e-66, Sum P(2) = 3.4e-66
Identities = 157/326 (48%), Positives = 196/326 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 344 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 393
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 394 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSAGKMD 448
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L N ++QLRK CNHP++F E G T + I SGK +LD++L K
Sbjct: 449 KMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMVVLDKLLAK 500
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDR----------G--ELL 228
KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R G E +
Sbjct: 501 LKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAI 560
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK V
Sbjct: 561 EAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 620
Query: 289 RVLRLITVNSVEERILAAARYKLNMD 314
RV RLIT N+VEERI+ A KL +D
Sbjct: 621 RVFRLITDNTVEERIVERAEIKLRLD 646
Score = 65 (27.9 bits), Expect = 3.4e-66, Sum P(2) = 3.4e-66
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 906 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 962
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 963 KNYTEEEDRFLICMLHK 979
Score = 40 (19.1 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 1161 (413.8 bits), Expect = 5.9e-120, Sum P(2) = 5.9e-120
Identities = 251/520 (48%), Positives = 330/520 (63%)
Query: 539 SIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPY 598
S + G L++YQI+GL W++SLY N +NGILADEMGLGKT+QTIALL YL + GP+
Sbjct: 155 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 214
Query: 599 LVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIK 657
+V+VP STL NW+ EF++W PS V+ + G AR A ++ M +++V +T+YE +IK
Sbjct: 215 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 274
Query: 658 DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALL 717
+KSV K W+ ++IDE HR+KN KL++ + F S++R+LLTGTPLQN L ELWALL
Sbjct: 275 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF-KSTNRLLLTGTPLQNNLHELWALL 333
Query: 718 NFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 777
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 334 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 383
Query: 778 SQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKL 837
LP K E I +S +Q+ Y IL+ D +G+ L N ++QLRK
Sbjct: 384 KSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMDKMRLLNILMQLRKC 438
Query: 838 CNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQM 897
CNHP++F E G T + I SGK +LD++L K KE RVL+F QM
Sbjct: 439 CNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 490
Query: 898 TQLMTILEDYFIWRDFSYLRLDGTTKSEDR----------G--ELLRKFNEPESKYFIFL 945
T+L+ ILEDY +WR + Y RLDG T E+R G E + FN P S FIF+
Sbjct: 491 TRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFM 550
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RLIT N+VEER
Sbjct: 551 LSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEER 610
Query: 1006 ILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
I+ A KL +D VIQ G + DQ+S + E LQ I H
Sbjct: 611 IVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRH 650
Score = 681 (244.8 bits), Expect = 7.1e-67, Sum P(2) = 7.1e-67
Identities = 157/326 (48%), Positives = 197/326 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 320 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 369
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D +G+
Sbjct: 370 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMD 424
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L N ++QLRK CNHP++F E G T + I SGK +LD++L K
Sbjct: 425 KMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMVVLDKLLAK 476
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDR----------G--ELL 228
KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R G E +
Sbjct: 477 LKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAI 536
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK V
Sbjct: 537 EAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 596
Query: 289 RVLRLITVNSVEERILAAARYKLNMD 314
RV RLIT N+VEERI+ A KL +D
Sbjct: 597 RVFRLITDNTVEERIVERAEIKLRLD 622
Score = 65 (27.9 bits), Expect = 7.1e-67, Sum P(2) = 7.1e-67
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 882 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 938
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 939 KNYTEEEDRFLICMLHK 955
Score = 40 (19.1 bits), Expect = 5.9e-120, Sum P(2) = 5.9e-120
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 59 DPE-YEEKMKADRAKRFEFLLKQTE 82
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 1161 (413.8 bits), Expect = 5.9e-120, Sum P(2) = 5.9e-120
Identities = 251/520 (48%), Positives = 330/520 (63%)
Query: 539 SIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPY 598
S + G L++YQI+GL W++SLY N +NGILADEMGLGKT+QTIALL YL + GP+
Sbjct: 176 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 235
Query: 599 LVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIK 657
+V+VP STL NW+ EF++W PS V+ + G AR A ++ M +++V +T+YE +IK
Sbjct: 236 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIK 295
Query: 658 DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALL 717
+KSV K W+ ++IDE HR+KN KL++ + F S++R+LLTGTPLQN L ELWALL
Sbjct: 296 EKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF-KSTNRLLLTGTPLQNNLHELWALL 354
Query: 718 NFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 777
NFLLP +F S F+ WF+ K L +++ ++ RLH VL+PFLLRR+K +VE
Sbjct: 355 NFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAVLKPFLLRRIKTDVE 404
Query: 778 SQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKL 837
LP K E I +S +Q+ Y IL+ D +G+ L N ++QLRK
Sbjct: 405 KSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMDKMRLLNILMQLRKC 459
Query: 838 CNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQM 897
CNHP++F E G T + I SGK +LD++L K KE RVL+F QM
Sbjct: 460 CNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQM 511
Query: 898 TQLMTILEDYFIWRDFSYLRLDGTTKSEDR----------G--ELLRKFNEPESKYFIFL 945
T+L+ ILEDY +WR + Y RLDG T E+R G E + FN P S FIF+
Sbjct: 512 TRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFM 571
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV RLIT N+VEER
Sbjct: 572 LSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEER 631
Query: 1006 ILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
I+ A KL +D VIQ G + DQ+S + E LQ I H
Sbjct: 632 IVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRH 671
Score = 681 (244.8 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 157/326 (48%), Positives = 197/326 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 341 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 390
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D +G+
Sbjct: 391 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMD 445
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L N ++QLRK CNHP++F E G T + I SGK +LD++L K
Sbjct: 446 KMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMVVLDKLLAK 497
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDR----------G--ELL 228
KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R G E +
Sbjct: 498 LKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAI 557
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK V
Sbjct: 558 EAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 617
Query: 289 RVLRLITVNSVEERILAAARYKLNMD 314
RV RLIT N+VEERI+ A KL +D
Sbjct: 618 RVFRLITDNTVEERIVERAEIKLRLD 643
Score = 65 (27.9 bits), Expect = 1.8e-66, Sum P(2) = 1.8e-66
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 903 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 959
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 960 KNYTEEEDRFLICMLHK 976
Score = 40 (19.1 bits), Expect = 5.9e-120, Sum P(2) = 5.9e-120
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 80 DPE-YEEKMKADRAKRFEFLLKQTE 103
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 1153 (410.9 bits), Expect = 4.1e-119, Sum P(2) = 4.1e-119
Identities = 256/552 (46%), Positives = 340/552 (61%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 127 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 183
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 184 GILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 243
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G R A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 244 VGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 303
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 304 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 355
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 356 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK--- 409
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 865
IL+ D +G+ L N ++QLRK CNHP++F E G T +
Sbjct: 410 --ILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDE 459
Query: 866 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 925
I SGK LD++L + KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E
Sbjct: 460 HIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 519
Query: 926 DRGEL-LRK-----------FNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 973
+R L L K FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP
Sbjct: 520 ERENLFLHKHNLFSTEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 579
Query: 974 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTG 1032
DLQA DRAHRIGQK VRV RLIT N+VEERI+ A KL +D VIQ G + DQ+S
Sbjct: 580 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNK 639
Query: 1033 SERHEFLQTILH 1044
+ E LQ I H
Sbjct: 640 LAKEEMLQMIRH 651
Score = 676 (243.0 bits), Expect = 5.5e-66, Sum P(2) = 5.5e-66
Identities = 157/326 (48%), Positives = 196/326 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 321 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 370
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D +G+
Sbjct: 371 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMD 425
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L N ++QLRK CNHP++F E G T + I SGK LD++L +
Sbjct: 426 KMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMVALDKLLAR 477
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL-LRK--------- 230
KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R L L K
Sbjct: 478 IKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEERENLFLHKHNLFSTEAI 537
Query: 231 --FNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK V
Sbjct: 538 EAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 597
Query: 289 RVLRLITVNSVEERILAAARYKLNMD 314
RV RLIT N+VEERI+ A KL +D
Sbjct: 598 RVFRLITDNTVEERIVERAEIKLRLD 623
Score = 65 (27.9 bits), Expect = 5.5e-66, Sum P(2) = 5.5e-66
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 883 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 939
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 940 KNYTEEEDRFLICMLHK 956
Score = 40 (19.1 bits), Expect = 4.1e-119, Sum P(2) = 4.1e-119
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 60 DPE-YEEKMKADRAKRFEFLLKQTE 83
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1155 (411.6 bits), Expect = 3.0e-117, P = 3.0e-117
Identities = 240/541 (44%), Positives = 345/541 (63%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
+KTE +E + ++ + H +TE S + GKL+EYQI+GL W++SLY N L+
Sbjct: 100 RKTEKEEDAELLQDEEHQDDEDHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLS 159
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTI+ L YL K GP++VIVP STL NW EF KW P NVV
Sbjct: 160 GILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVL 219
Query: 627 KGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
+G R ++ + ++ +KF+VL+T++E I+++KS L K +W+ +++DE HR+KN L
Sbjct: 220 QGDKEQRASIIKDQLYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSL 279
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + FY S +R+L+TGTPLQN L ELWALLNFLLP +F F++ F+ + ++
Sbjct: 280 SKIIRLFY-SRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDE 338
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
E + + LH++L PFLLRR+K +VE L K+E + M+ +Q Y+ L
Sbjct: 339 EEKQRRQD-KAVSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLE 397
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 865
+ I +G GK EG R L N ++QLRK CNHP++F E G T +
Sbjct: 398 KDIDAVNGVV-GKR-EGKTRLL-NIVMQLRKCCNHPYLFDGAEP------GPPYT--TDE 446
Query: 866 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 925
+ SGK +LD++L KFK RVL+F QM++++ ILEDY +RD+ Y R+DG+T E
Sbjct: 447 HLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHE 506
Query: 926 DRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRI 985
DR E + ++N P+S+ FIFLL+TRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRI
Sbjct: 507 DRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRI 566
Query: 986 GQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG--MFDQKSTGSERHEFLQTIL 1043
GQK +V+V R +T ++EE++L A KL +D+ VIQ G M + G+ + + + I
Sbjct: 567 GQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQGRQMNSNNNVGNSKDDLIGMIQ 626
Query: 1044 H 1044
H
Sbjct: 627 H 627
Score = 668 (240.2 bits), Expect = 9.0e-63, P = 9.0e-63
Identities = 143/315 (45%), Positives = 200/315 (63%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F F++ F+ + ++ E + + LH++
Sbjct: 297 TPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQD-KAVSELHQL 355
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L PFLLRR+K +VE L K+E + M+ +Q Y+ L + I +G GK EG
Sbjct: 356 LSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVV-GKR-EGK 413
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
R L N ++QLRK CNHP++F E G T + + SGK +LD++L K
Sbjct: 414 TRLL-NIVMQLRKCCNHPYLFDGAEP------GPPYT--TDEHLVYNSGKMIILDKMLKK 464
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
FK RVL+F QM++++ ILEDY +RD+ Y R+DG+T EDR E + ++N P+S+ FI
Sbjct: 465 FKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFI 524
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLL+TRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK +V+V R +T ++E
Sbjct: 525 FLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIE 584
Query: 301 ERILAAARYKLNMDE 315
E++L A KL +D+
Sbjct: 585 EKVLERAAQKLRLDQ 599
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1155 (411.6 bits), Expect = 3.0e-117, P = 3.0e-117
Identities = 240/541 (44%), Positives = 345/541 (63%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
+KTE +E + ++ + H +TE S + GKL+EYQI+GL W++SLY N L+
Sbjct: 100 RKTEKEEDAELLQDEEHQDDEDHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLS 159
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTI+ L YL K GP++VIVP STL NW EF KW P NVV
Sbjct: 160 GILADEMGLGKTLQTISFLGYLRYIKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVL 219
Query: 627 KGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
+G R ++ + ++ +KF+VL+T++E I+++KS L K +W+ +++DE HR+KN L
Sbjct: 220 QGDKEQRASIIKDQLYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSL 279
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + FY S +R+L+TGTPLQN L ELWALLNFLLP +F F++ F+ + ++
Sbjct: 280 SKIIRLFY-SRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDE 338
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
E + + LH++L PFLLRR+K +VE L K+E + M+ +Q Y+ L
Sbjct: 339 EEKQRRQD-KAVSELHQLLSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLE 397
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 865
+ I +G GK EG R L N ++QLRK CNHP++F E G T +
Sbjct: 398 KDIDAVNGVV-GKR-EGKTRLL-NIVMQLRKCCNHPYLFDGAEP------GPPYT--TDE 446
Query: 866 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 925
+ SGK +LD++L KFK RVL+F QM++++ ILEDY +RD+ Y R+DG+T E
Sbjct: 447 HLVYNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHE 506
Query: 926 DRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRI 985
DR E + ++N P+S+ FIFLL+TRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRI
Sbjct: 507 DRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRI 566
Query: 986 GQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG--MFDQKSTGSERHEFLQTIL 1043
GQK +V+V R +T ++EE++L A KL +D+ VIQ G M + G+ + + + I
Sbjct: 567 GQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVIQQGRQMNSNNNVGNSKDDLIGMIQ 626
Query: 1044 H 1044
H
Sbjct: 627 H 627
Score = 668 (240.2 bits), Expect = 9.0e-63, P = 9.0e-63
Identities = 143/315 (45%), Positives = 200/315 (63%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F F++ F+ + ++ E + + LH++
Sbjct: 297 TPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDNQNSEELDEEEKQRRQD-KAVSELHQL 355
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L PFLLRR+K +VE L K+E + M+ +Q Y+ L + I +G GK EG
Sbjct: 356 LSPFLLRRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDIDAVNGVV-GKR-EGK 413
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
R L N ++QLRK CNHP++F E G T + + SGK +LD++L K
Sbjct: 414 TRLL-NIVMQLRKCCNHPYLFDGAEP------GPPYT--TDEHLVYNSGKMIILDKMLKK 464
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
FK RVL+F QM++++ ILEDY +RD+ Y R+DG+T EDR E + ++N P+S+ FI
Sbjct: 465 FKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFI 524
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLL+TRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK +V+V R +T ++E
Sbjct: 525 FLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIE 584
Query: 301 ERILAAARYKLNMDE 315
E++L A KL +D+
Sbjct: 585 EKVLERAAQKLRLDQ 599
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 1094 (390.2 bits), Expect = 5.2e-113, Sum P(3) = 5.2e-113
Identities = 253/620 (40%), Positives = 353/620 (56%)
Query: 509 TEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGI 568
TE + K+ YY++AH +E V Q S++ G L++YQ+ GL+WM+SLYNN LNGI
Sbjct: 944 TEMNAPKENSSVNKYYTLAHAVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGI 1003
Query: 569 LADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKG 628
LADEMGLGKTVQ +AL+ YLME K N GP+L+IVP + L NW E W PS + + Y G
Sbjct: 1004 LADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVG 1063
Query: 629 SPLARRALQGR-MKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQ 687
+ R L + + KFNVL+TTYEFI+ D+S LSK+ WK +IIDE RMK+ L +
Sbjct: 1064 TKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLAR 1123
Query: 688 TLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EK 745
L+ Y R+LLTGTPLQN L ELW+LLN LLP +F + F WF PF G
Sbjct: 1124 DLDR-YRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHN 1182
Query: 746 VE---LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
+E L E+ +++I RLH++L PF+LRR ++VE LP KV +++C MS +Q +Y
Sbjct: 1183 IEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDW 1242
Query: 803 LHNRGILLTD-GSEKGKTGEGGA------RALKNTIVQLRKLCNHPFMFQNIEEKYCQHI 855
+ G L D EK + + R L N ++LRK CNHP + Y
Sbjct: 1243 IKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHPLL----NYPYFNDF 1298
Query: 856 GQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSY 915
++ V R+ GK +LDRIL K + T HRVL+F MT+L+ ILE+Y WR Y
Sbjct: 1299 SKDFLV-------RSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVY 1351
Query: 916 LRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQD 975
R+DGTT EDR + FN+P++ FIFLLS RA G GLNLQ ADTV+I+D D NP +
Sbjct: 1352 RRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNE 1411
Query: 976 LQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKS--TGS 1033
QA RAHRIGQ EV+V I + +V E++ ++ K ++++ G D + G
Sbjct: 1412 EQAVARAHRIGQTREVKV---IYMEAVVEKL--SSHQK---EDELRSGGSVDLEDDMAGK 1463
Query: 1034 ERH-EFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDE---LTLFQKMDAERRKGETKP 1089
+R+ ++ ++ + RT E +TL + E R ET
Sbjct: 1464 DRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVH 1523
Query: 1090 RLVEIKELPDWMVKDDDEVE 1109
+ + E+ + + ++EVE
Sbjct: 1524 DVPSLHEVNRMIARSEEEVE 1543
Score = 607 (218.7 bits), Expect = 2.1e-64, Sum P(2) = 2.1e-64
Identities = 135/308 (43%), Positives = 179/308 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVE---LNEEETILIIR 55
TPLQN L ELW+LLN LLP +F + F WF PF G +E L E+ +++I
Sbjct: 1139 TPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIH 1198
Query: 56 RLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKG 114
RLH++L PF+LRR ++VE LP KV +++C MS +Q +Y + G L D EK
Sbjct: 1199 RLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKL 1258
Query: 115 KTGEGGA------RALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTS 168
+ + R L N ++LRK CNHP + Y ++ V R+
Sbjct: 1259 RAQKNPIYQAKIYRTLNNRCMELRKACNHPLL----NYPYFNDFSKDFLV-------RSC 1307
Query: 169 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 228
GK +LDRIL K + T HRVL+F MT+L+ ILE+Y WR Y R+DGTT EDR +
Sbjct: 1308 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAI 1367
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
FN+P++ FIFLLS RA G GLNLQ ADTV+I+D D NP + QA RAHRIGQ EV
Sbjct: 1368 VDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREV 1427
Query: 289 RVLRLITV 296
+V+ + V
Sbjct: 1428 KVIYMEAV 1435
Score = 143 (55.4 bits), Expect = 2.1e-64, Sum P(2) = 2.1e-64
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 1011 RYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILH-QXXXXXXXXXXXXXXTVNQLIARTE 1069
+YK++M ++VI AG FDQ++T ER L+T+LH + VN++IAR+E
Sbjct: 1480 QYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLHEVNRMIARSE 1539
Query: 1070 DELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDEV 1108
+E+ LF +MD E E + +++P W+ EV
Sbjct: 1540 EEVELFDQMDEEFDWTE---EMTNHEQVPKWLRASTREV 1575
Score = 51 (23.0 bits), Expect = 5.2e-113, Sum P(3) = 5.2e-113
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 281 RIGQKNEVRVLRLITVN--SVEERILAAA-RYKLNMDEKEYHRNNTARTQKLNKAIINYH 337
R+ ++ + + R + N +V E+ L +++ + E + + ART + N+ + YH
Sbjct: 769 RLCERQRLEMNRQVLANQKAVREKQLKTIFQWRKKLLEAHWAIRD-ARTAR-NRGVAKYH 826
Query: 338 INAXXXXXXXXXXXXXXXXXXLMAEDEEGYRK-LIDQKKD------KRLAFL---LSQTD 387
L D E YR+ L++Q+ + +R A L L+QT+
Sbjct: 827 EKMLREFSKRKDDGRNKRMEALKNNDVERYREMLLEQQTNMPGDAAERYAVLSSFLTQTE 886
Query: 388 EYISNL 393
+Y+ L
Sbjct: 887 DYLHKL 892
Score = 43 (20.2 bits), Expect = 4.1e-53, Sum P(3) = 4.1e-53
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 751 EETILIIRRLHKVLRPFLLRRLKKEVE--SQLPEKVEY 786
+ET+ + LH+V R ++ R ++EVE Q+ E+ ++
Sbjct: 1519 QETVHDVPSLHEVNR--MIARSEEEVELFDQMDEEFDW 1554
Score = 42 (19.8 bits), Expect = 5.2e-113, Sum P(3) = 5.2e-113
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 1081 ERRKGETKPRLVEIKELPD 1099
ER++G K + + KE+ D
Sbjct: 1606 ERKRGRPKSKKINYKEIED 1624
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 1040 (371.2 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 221/511 (43%), Positives = 318/511 (62%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
EK+ +Q + NG+L+++Q+ GL WM L++ N NGILADEMGLGKTVQT+A L++L+
Sbjct: 348 EKLFKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYA 407
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ-----GRMKNSKFN 646
++ GP+LV+VPLST+ W FEKWAP N V Y G+ AR+ ++ + + KFN
Sbjct: 408 RRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKTIREYELYNQNRKPKFN 467
Query: 647 VLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPL 706
VLLTTYE+I+KDK+ L +W+ + +DE HR+KN L + L F S+R+L+TGTPL
Sbjct: 468 VLLTTYEYILKDKNELGAFKWQFLAVDEAHRLKNAESSLYEALKGF-KVSNRLLITGTPL 526
Query: 707 QNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRP 766
QN + EL AL NFL+P F T +Q + F T ++ +E+ I+ L K + P
Sbjct: 527 QNNVKELAALCNFLMPGKF----TIDQEID--FET----IDSEQEQ---YIKDLQKKISP 573
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
F+LRRLKK+VE LP K E I++ ++S +Q Y+++ + + +G +
Sbjct: 574 FILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNYAALNAGNRGSQ-----IS 628
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L N + +L+K NHP++F E+K G + + I +SGK LL+++L + ++
Sbjct: 629 LLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENTLKGIVMSSGKMVLLEQLLSRLRK 688
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
HRVL+F QM +++ IL DY + + + RLDGT S R + FN P SK F FLL
Sbjct: 689 EGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDHFNAPGSKDFAFLL 748
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
STRAGGLG+NL ADTVIIFDSDWNP DLQA RAHRIGQKN V V R ++ ++VEE+I
Sbjct: 749 STRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSKDTVEEQI 808
Query: 1007 LAAARYKLNMDEKVIQAGMFDQKSTGSERHE 1037
L AR K+ ++ +I G+ D + + E
Sbjct: 809 LERARKKMVLEYAIISLGITDPSAKNGSKTE 839
Score = 549 (198.3 bits), Expect = 1.2e-47, Sum P(2) = 1.2e-47
Identities = 116/274 (42%), Positives = 168/274 (61%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++ +E+ I+ L K + PF+LRRLKK+VE LP K E I++ ++S +Q Y+++
Sbjct: 554 ETIDSEQEQ---YIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNI 610
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
+ + +G +L N + +L+K NHP++F E+K G + +
Sbjct: 611 ITKNYAALNAGNRGSQ-----ISLLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENT 665
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
I +SGK LL+++L + ++ HRVL+F QM +++ IL DY + + + RLDGT
Sbjct: 666 LKGIVMSSGKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVP 725
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
S R + FN P SK F FLLSTRAGGLG+NL ADTVIIFDSDWNP DLQA RAH
Sbjct: 726 SSKRKIAIDHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAH 785
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
RIGQKN V V R ++ ++VEE+IL AR K+ ++
Sbjct: 786 RIGQKNHVSVYRFVSKDTVEEQILERARKKMVLE 819
Score = 159 (61.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL AL NFL+P F T +Q + F T ++ +E+ I+ L K
Sbjct: 524 TPLQNNVKELAALCNFLMPGKF----TIDQEID--FET----IDSEQEQ---YIKDLQKK 570
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 114
+ PF+LRRLKK+VE LP K E I++ ++S +Q Y+++ + + +G
Sbjct: 571 ISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNYAALNAGNRG 624
Score = 38 (18.4 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1129 GSRQ-RKQVDYTDSLTDQEW 1147
GS + KQ + TD D EW
Sbjct: 893 GSEEFLKQFEVTDYKADVEW 912
Score = 38 (18.4 bits), Expect = 1.7e-109, Sum P(3) = 1.7e-109
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 511 DDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKE 548
+ E+ + EE YY + I+++ KL E
Sbjct: 146 EPEFDEEDEEGDYYYYQQAIEPENERGIDIVMDHKLNE 183
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 227/506 (44%), Positives = 309/506 (61%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
E ++ G+LK YQ+KG++W++SL+ N LNGILAD+MGLGKT+QTI L++L K L
Sbjct: 192 ELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHL--KGNGL 249
Query: 596 -GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGR-MKNS---KFNVLLT 650
GPYLVI PLSTLSNW E ++ PS N + Y G R L+ + M + KF +++T
Sbjct: 250 DGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVIT 309
Query: 651 TYEFIIKD-KSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
+YE + D K +L WK ++IDEGHR+KNH CKL + L +++LLTGTPLQN
Sbjct: 310 SYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHL-KMDNKLLLTGTPLQNN 368
Query: 710 LPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEET-ILIIRRLHKVLRPFL 768
L ELW+LLNF+LP IF S FE WF+ E + EE+ ++ +LH +LRPF+
Sbjct: 369 LSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFI 428
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K +VE LP K E I+ M+ QK +HL N + G E G+G L
Sbjct: 429 LRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLG-ENAIRGQGWKGKLN 487
Query: 829 NTIVQLRKLCNHPFMFQN-IEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKET 887
N ++QLRK CNHP + Q I+ Y + +I GKF LL+R+L +
Sbjct: 488 NLVIQLRKNCNHPDLLQGQIDGSYLYPPVE--------EIVGQCGKFRLLERLLVRLFAN 539
Query: 888 KHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLS 947
H+VL+F Q T+L+ I++ YF + F R+DG+ K ++R ++ F++ +S IFLLS
Sbjct: 540 NHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLS 599
Query: 948 TRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
TRAGGLG+NL AADT I++DSDWNP DLQA DR HRIGQ V V RL T S+E R+L
Sbjct: 600 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVL 659
Query: 1008 AAARYKLNMDEKVIQAGMFDQKSTGS 1033
A KL ++ VI G F Q+ S
Sbjct: 660 KRAYSKLKLEHVVIGQGQFHQERAKS 685
Score = 640 (230.4 bits), Expect = 6.8e-62, P = 6.8e-62
Identities = 139/316 (43%), Positives = 188/316 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEET-ILIIRRLHK 59
TPLQN L ELW+LLNF+LP IF S FE WF+ E + EE+ ++ +LH
Sbjct: 363 TPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHG 422
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+LRPF+LRR+K +VE LP K E I+ M+ QK +HL N + G E G+G
Sbjct: 423 ILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLG-ENAIRGQG 481
Query: 120 GARALKNTIVQLRKLCNHPFMFQN-IEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
L N ++QLRK CNHP + Q I+ Y + +I GKF LL+R+L
Sbjct: 482 WKGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVE--------EIVGQCGKFRLLERLL 533
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
+ H+VL+F Q T+L+ I++ YF + F R+DG+ K ++R ++ F++ +S
Sbjct: 534 VRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSC 593
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
IFLLSTRAGGLG+NL AADT I++DSDWNP DLQA DR HRIGQ V V RL T S
Sbjct: 594 SIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQS 653
Query: 299 VEERILAAARYKLNMD 314
+E R+L A KL ++
Sbjct: 654 IETRVLKRAYSKLKLE 669
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 1019 (363.8 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 237/553 (42%), Positives = 326/553 (58%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 150 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 206
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 266
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 267 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 326
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 327 SEIVRDF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDT-------K 378
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 379 NCLGDQK---LVERLHTVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK--- 432
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEE--KYC--QHIGQNN-- 859
IL+ D G+ L N ++QLRK CNHP++F E Y +HI N+
Sbjct: 433 --ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGK 490
Query: 860 TVVSGPDI--YRTSGK----FELLDRILPKFKE-TKHRVLMFCQMTQLMTILEDYFIWRD 912
VV + + G F + R+L ++ R +C++ E I +D
Sbjct: 491 MVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEILKD 550
Query: 913 FSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNP 972
F + + + E + FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP
Sbjct: 551 FKII----FHEYQGSNEAIEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNP 606
Query: 973 HQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKST 1031
DLQA DRAHRIGQK VRV RLIT N+VEERI+ A KL +D VIQ G + DQ+S
Sbjct: 607 QVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSN 666
Query: 1032 GSERHEFLQTILH 1044
+ E LQ I H
Sbjct: 667 KMAKEEMLQMIRH 679
Score = 537 (194.1 bits), Expect = 1.0e-49, Sum P(2) = 1.0e-49
Identities = 137/327 (41%), Positives = 181/327 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 344 TPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDT-------KNCLGDQK---LVERLHTV 393
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 394 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSAGKMD 448
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEE--KYC--QHIGQNN--TVVSGPDI--YRTSGK-- 170
L N ++QLRK CNHP++F E Y +HI N+ VV + + G
Sbjct: 449 KMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRV 508
Query: 171 --FELLDRILPKFKE-TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
F + R+L ++ R +C++ E I +DF + + + E
Sbjct: 509 LIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEILKDFKII----FHEYQGSNEA 564
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK
Sbjct: 565 IEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKP 624
Query: 288 VRVLRLITVNSVEERILAAARYKLNMD 314
VRV RLIT N+VEERI+ A KL +D
Sbjct: 625 VRVFRLITDNTVEERIVERAEIKLRLD 651
Score = 65 (27.9 bits), Expect = 1.0e-49, Sum P(2) = 1.0e-49
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 911 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 967
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 968 KNYTEEEDRFLICMLHK 984
Score = 40 (19.1 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 949 (339.1 bits), Expect = 3.0e-104, Sum P(4) = 3.0e-104
Identities = 209/508 (41%), Positives = 302/508 (59%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
+K+ + + +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L+ +
Sbjct: 369 QKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLM 428
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ-------GRMKNS- 643
+ GP+L+I PLST++NW EF W N + Y GS ++R+ +Q N
Sbjct: 429 GIH-GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPL 486
Query: 644 ----KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
KF V++TT+E I+ D L KIQW+C++IDE HR+KN +CKL + L H+V
Sbjct: 487 PGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMA-LEHKV 545
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LLNFL P F S + F + F +L EE + ++
Sbjct: 546 LLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KK 592
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + KG
Sbjct: 593 LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 648
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKF 874
+ L NT+++LRK CNHP++ EEK + + ++ PD + + +GK
Sbjct: 649 NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-EAPDFQLQAMIQAAGKL 707
Query: 875 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 934
L+D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F
Sbjct: 708 VLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRF 767
Query: 935 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 994
+P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 768 CKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 827
Query: 995 RLITVNSVEERILAAARYKLNMDEKVIQ 1022
RLIT NS E + A KL +D+ V+Q
Sbjct: 828 RLITRNSYEREMFDKASLKLGLDKAVLQ 855
Score = 590 (212.7 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 138/340 (40%), Positives = 198/340 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL P F S + F + F +L EE + ++L +
Sbjct: 550 TPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 596
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + KG +
Sbjct: 597 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-ANQHN 652
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK L+D
Sbjct: 653 MPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-EAPDFQLQAMIQAAGKLVLID 711
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F +P+
Sbjct: 712 KLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPD 771
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 772 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 831
Query: 296 VNSVEERILAAARYKLNMDE---KEYHRNN-TARTQKLNK 331
NS E + A KL +D+ ++ +R T Q+L+K
Sbjct: 832 RNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSK 871
Score = 45 (20.9 bits), Expect = 3.0e-104, Sum P(4) = 3.0e-104
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 516 DAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
D GEE T+Y + + Y E E + K+KE++
Sbjct: 312 DTGEEVTHYLVKWCSLPYEESTWELEEDVDPVKIKEFE 349
Score = 45 (20.9 bits), Expect = 7.1e-101, Sum P(3) = 7.1e-101
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFL--LRRLKKEVESQLPEKV-EYIIKCDMSGLQKLLY 97
+ V++ E E + I + + RP ++L+K E + ++ EY + G+ LL+
Sbjct: 341 DPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSNQLREY----QLEGMNWLLF 396
Query: 98 QHLHNRGILLTDGSEKGKT 116
+ + +L D GKT
Sbjct: 397 NWYNRKNCILADEMGLGKT 415
Score = 42 (19.8 bits), Expect = 3.0e-104, Sum P(4) = 3.0e-104
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE 222
+E++++ +R+FSYL T E
Sbjct: 237 MEEFYVKYRNFSYLHCKWATLEE 259
Score = 40 (19.1 bits), Expect = 3.0e-104, Sum P(4) = 3.0e-104
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1069 EDELTLFQKMDAERRKGETKPR 1090
EDEL F ++D++ + T+ R
Sbjct: 984 EDELMEFSELDSDSDERPTRSR 1005
Score = 39 (18.8 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 24/88 (27%), Positives = 37/88 (42%)
Query: 858 NNTVVS--GPDIYRTSGKFELLDRILPKFKETK--HRVLMFCQMTQLMTILEDYFIWRDF 913
N T +S P+ ++ K LD KE+ R + Q + ED + +F
Sbjct: 933 NRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELM--EF 990
Query: 914 SYLRLDGTTKSEDRGELLRKFNEPESKY 941
S L D S++R R+FNE +Y
Sbjct: 991 SELDSD----SDERPTRSRRFNEKTRRY 1014
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 997 (356.0 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 220/498 (44%), Positives = 304/498 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 151 NNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 209
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 210 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 268
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 269 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 327
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL P F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 328 EELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 374
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 375 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KGG-GQANVPNLLNT 430
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + + S PD + + +GK L+D++LPK K
Sbjct: 431 MMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLIDKLLPKLK 489
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F+ P+S F+FL
Sbjct: 490 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFL 549
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 550 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 609
Query: 1006 ILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 610 MFDKASLKLGLDKAVLQS 627
Score = 615 (221.5 bits), Expect = 1.7e-56, P = 1.7e-56
Identities = 137/320 (42%), Positives = 191/320 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S +TF Q F +L EE + ++L +
Sbjct: 321 TPLQNTVEELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 367
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 368 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KGG-GQAN 423
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + + S PD + + +GK L+D
Sbjct: 424 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLID 482
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F+ P+
Sbjct: 483 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPD 542
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT
Sbjct: 543 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 602
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 603 RNSYEREMFDKASLKLGLDK 622
Score = 44 (20.5 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QD+ D+A +I ++ E + R + VE A +K + +EY NN
Sbjct: 101 DSTWELKQDI---DQA-KI-EEFEKLMSREPEMERVERP--PADDWKKSESSREYKNNNK 153
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 154 LREYQLEGVNWLLFNWY 170
Score = 43 (20.2 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 30 QWFNAPFA-TTGE-KVELNE---EETILIIRR---LHKVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E K ++++ EE ++ R + +V RP KK S+ +
Sbjct: 93 KWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERP-PADDWKKSESSREYKNN 151
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + G+ LL+ + R +L D GKT
Sbjct: 152 NKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKT 186
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 601 (216.6 bits), Expect = 1.0e-101, Sum P(2) = 1.0e-101
Identities = 123/289 (42%), Positives = 185/289 (64%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
+Q I G ++ YQ++G+EW+ L+ N +NGILADEMGLGKT+Q IA + ++E+
Sbjct: 212 QQPKIFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTIQCIATIALMVERGVP- 270
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL----QGRMKNSKFN-VLLT 650
GP+LV PLSTL NW+ EF+++ P ++ Y G+ RR L GR + K + V++T
Sbjct: 271 GPFLVCGPLSTLPNWMSEFKRFTPEIPLMLYHGAQQERRKLVRKIHGRQGSLKIHPVVIT 330
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
++E ++D++ L WK +I+DEGHR+KN +C+L + L F N+ +++LLTGTPLQN L
Sbjct: 331 SFEIAMRDRNALQSCFWKYLIVDEGHRIKNMNCRLIRELKRF-NADNKLLLTGTPLQNNL 389
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFAT-TGEKVELNEEETILIIRRLHKVLRPFLL 769
ELW+LLNFLLP +F +FE WF+ T T E + E+E I+ LH++L PFLL
Sbjct: 390 AELWSLLNFLLPDVFDDLKSFESWFDITSITETAEDIIAKEKEQN-ILHMLHQILTPFLL 448
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI--LLTDGSEK 816
RRLK +V ++P K E ++ ++ Q+ Y + NR I LL + E+
Sbjct: 449 RRLKSDVALEVPPKREVVVYAPLAKKQETFYTAIVNRTIRNLLGNNEEE 497
Score = 470 (170.5 bits), Expect = 1.0e-101, Sum P(2) = 1.0e-101
Identities = 97/207 (46%), Positives = 134/207 (64%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N ++ LRK CNHP++ + + Q + D+ + SGKF LLDR+LP+ K+
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPLDPATQQFKVDE------DLVKNSGKFLLLDRMLPELKK 613
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 945
H+VLMF QMT ++ IL DY R F + RLDG+ DR E + +FN +PE F+FL
Sbjct: 614 RGHKVLMFSQMTMMLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNNDPE--VFLFL 671
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 672 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731
Query: 1006 ILAAARYKLNMDEKVIQAGMFDQKSTG 1032
I+ A K +++ +I F +G
Sbjct: 732 IVERAAAKRKLEKLIIHKNQFKGGKSG 758
Score = 468 (169.8 bits), Expect = 9.1e-60, Sum P(2) = 9.1e-60
Identities = 96/199 (48%), Positives = 132/199 (66%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N ++ LRK CNHP++ + + Q + D+ + SGKF LLDR+LP+ K+
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPLDPATQQFKVDE------DLVKNSGKFLLLDRMLPELKK 613
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 242
H+VLMF QMT ++ IL DY R F + RLDG+ DR E + +FN +PE F+FL
Sbjct: 614 RGHKVLMFSQMTMMLDILMDYCYLRGFKFSRLDGSMSYSDREENMHQFNNDPE--VFLFL 671
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 672 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731
Query: 303 ILAAARYKLNMDEKEYHRN 321
I+ A K +++ H+N
Sbjct: 732 IVERAAAKRKLEKLIIHKN 750
Score = 227 (85.0 bits), Expect = 5.4e-60, Sum P(2) = 5.4e-60
Identities = 50/116 (43%), Positives = 70/116 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT-TGEKVELNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP +F +FE WF+ T T E + E+E I+ LH+
Sbjct: 383 TPLQNNLAELWSLLNFLLPDVFDDLKSFESWFDITSITETAEDIIAKEKEQN-ILHMLHQ 441
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI--LLTDGSEK 113
+L PFLLRRLK +V ++P K E ++ ++ Q+ Y + NR I LL + E+
Sbjct: 442 ILTPFLLRRLKSDVALEVPPKREVVVYAPLAKKQETFYTAIVNRTIRNLLGNNEEE 497
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 998 (356.4 bits), Expect = 4.3e-101, Sum P(3) = 4.3e-101
Identities = 220/499 (44%), Positives = 306/499 (61%)
Query: 546 LKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLS 605
L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI PLS
Sbjct: 1012 LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIAPLS 1070
Query: 606 TLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLTTYE 653
T+ NW EF W NVV Y GS +R+ +Q GR+ K + KF+ ++TT+E
Sbjct: 1071 TIPNWEREFRTWT-ELNVVVYHGSQASRKTIQAYEMYYRDTQGRIIKGAYKFHAVITTFE 1129
Query: 654 FIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPEL 713
I+ D L + W+C+IIDE HR+KN +CKL + L + H+VLLTGTPLQN + EL
Sbjct: 1130 MILTDCPELRNVPWRCVIIDEAHRLKNRNCKLLEGLKMM-DMEHKVLLTGTPLQNTVEEL 1188
Query: 714 WALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
++LLNFL P F S STF Q F +L EE + ++L +L+P +LRRLK
Sbjct: 1189 FSLLNFLEPDRFPSESTFMQEFG----------DLKTEEQV---QKLQGILKPMMLRRLK 1235
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHL--HNRGILLTDGSEKGKTGEGGARA--LKN 829
++VE L K E II+ +++ +QK Y+ + N L G+ G G GG+ L N
Sbjct: 1236 EDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGSGGGGGSNVPNLLN 1295
Query: 830 TIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLDRILPKF 884
T+++LRK CNHP++ EEK + + + + P+ + + +GK L+D++LPK
Sbjct: 1296 TMMELRKCCNHPYLINGAEEKIMEEFRETHPL-DQPEFHLQAMIQAAGKLVLIDKLLPKL 1354
Query: 885 KETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIF 944
K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F+ P+S F+F
Sbjct: 1355 KAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVF 1414
Query: 945 LLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEE 1004
LL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 1415 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYER 1474
Query: 1005 RILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1475 EMFDKASLKLGLDKAVLQS 1493
Score = 636 (228.9 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 147/345 (42%), Positives = 203/345 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL P F S STF Q F +L EE + ++L +
Sbjct: 1179 TPLQNTVEELFSLLNFLEPDRFPSESTFMQEFG----------DLKTEEQV---QKLQGI 1225
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL--HNRGILLTDGSEKGKTGE 118
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + N L G+ G G
Sbjct: 1226 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFAFLSKSGAGGGSGGG 1285
Query: 119 GGARA--LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKF 171
GG+ L NT+++LRK CNHP++ EEK + + + + P+ + + +GK
Sbjct: 1286 GGSNVPNLLNTMMELRKCCNHPYLINGAEEKIMEEFRETHPL-DQPEFHLQAMIQAAGKL 1344
Query: 172 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 231
L+D++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F
Sbjct: 1345 VLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRF 1404
Query: 232 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 291
+ P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++
Sbjct: 1405 SRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIY 1464
Query: 292 RLITVNSVEERILAAARYKLNMDEKEYH----RNNTAR-TQKLNK 331
RLIT NS E + A KL +D+ R N A Q+L+K
Sbjct: 1465 RLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSK 1509
Score = 65 (27.9 bits), Expect = 1.7e-57, Sum P(3) = 1.7e-57
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 452 DNKLRGEDAPPAKQIKEWLASHP 474
+ L+GED K ++EWL HP
Sbjct: 2677 EGSLQGEDGSSTKDLREWLRQHP 2699
Score = 61 (26.5 bits), Expect = 1.6e-58, Sum P(2) = 1.6e-58
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 2746 RVPVVNIRNGRKMGGAMAPPMKDLPRWLVENP 2777
Score = 50 (22.7 bits), Expect = 4.3e-101, Sum P(3) = 4.3e-101
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 41 EKVELNEEETILIIR-RLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 99
++V++ E E ++ +L +V RP K E S+ + + + + G+ LL+
Sbjct: 969 DQVKIEEFERVMAREPQLKRVERPPTSDWQKSE-SSREYKNANALREYQLEGVNWLLFNW 1027
Query: 100 LHNRGILLTDGSEKGKT 116
+ R +L D GKT
Sbjct: 1028 YNTRNCILADEMGLGKT 1044
Score = 37 (18.1 bits), Expect = 4.3e-101, Sum P(3) = 4.3e-101
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 1094 IKELPDWMVKDDD 1106
+K+LP W+V++ +
Sbjct: 2766 MKDLPRWLVENPE 2778
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 981 (350.4 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 232/558 (41%), Positives = 325/558 (58%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 147 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 203
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 204 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICF 263
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 264 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 323
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 324 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 375
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E + +S +Q+ + L
Sbjct: 376 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWFVIL-- 430
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLR--KLCNHPFMFQNIEEKYCQHIGQNNTVVS 863
+++ S + + + N I+ LR K C F Q K Q++ N V
Sbjct: 431 -AFFISENSNN--SNKNHKLDILNVIMLLREAKCCGASFCLQ----KKKQNVAYINKVHI 483
Query: 864 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW-----RDFSYLRL 918
Y + G +LD + ++ HR C + L T E+ F+ + +S ++
Sbjct: 484 N---YCSKGIISMLDYCKTEIEQ--HRCRCLCILNPLNTFFENGFLQIHIKHKPYSAIQN 538
Query: 919 DGTTKSED-----------RGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFD 967
D +ED + E + FN P S FIF+LSTRAGGLG+NL +AD VI++D
Sbjct: 539 DPFPWNEDDTKYLFVYIIYKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYD 598
Query: 968 SDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG-MF 1026
SDWNP DLQA DRAHRIGQK VRV RLIT N+VEERI+ A KL +D VIQ G +
Sbjct: 599 SDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLI 658
Query: 1027 DQKSTGSERHEFLQTILH 1044
DQ+S + E LQ I H
Sbjct: 659 DQQSNKLAKEEMLQMIRH 676
Score = 501 (181.4 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 132/332 (39%), Positives = 180/332 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 341 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 390
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E + +S +Q+ + L +++ S + +
Sbjct: 391 LKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWFVIL---AFFISENSNN--SNKNH 445
Query: 121 ARALKNTIVQLR--KLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
+ N I+ LR K C F Q K Q++ N V Y + G +LD
Sbjct: 446 KLDILNVIMLLREAKCCGASFCLQ----KKKQNVAYINKVHIN---YCSKGIISMLDYCK 498
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIW-----RDFSYLRLDGTTKSED---------- 223
+ ++ HR C + L T E+ F+ + +S ++ D +ED
Sbjct: 499 TEIEQ--HRCRCLCILNPLNTFFENGFLQIHIKHKPYSAIQNDPFPWNEDDTKYLFVYII 556
Query: 224 -RGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRI 282
+ E + FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRI
Sbjct: 557 YKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRI 616
Query: 283 GQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
GQK VRV RLIT N+VEERI+ A KL +D
Sbjct: 617 GQKKPVRVFRLITDNTVEERIVERAEIKLRLD 648
Score = 65 (27.9 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 908 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 964
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 965 KNYTEEEDRFLICMLHK 981
Score = 40 (19.1 bits), Expect = 5.9e-101, Sum P(2) = 5.9e-101
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 80 DPE-YEEKMKADRAKRFEFLLKQTE 103
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 645 (232.1 bits), Expect = 6.7e-101, Sum P(2) = 6.7e-101
Identities = 134/284 (47%), Positives = 184/284 (64%)
Query: 533 KVT--EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLME 590
K+T +Q ++ G+LK+YQ+ GLEW+++L+ N LNGILADEMGLGKT+Q I+ L++L+E
Sbjct: 160 KITNNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIE 219
Query: 591 KKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLT 650
N GP+LV+VP+STLSNW E K+AP V Y G+ R + + N++LT
Sbjct: 220 NGIN-GPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDIDLLQQQETTNIILT 278
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
+YE I+D + L KI WK +I+DEGHR+KN C L + L N S+R+LLTGTPLQN L
Sbjct: 279 SYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKL-NVSNRLLLTGTPLQNNL 337
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFAT--TGEKVELNEEE-----TIL-------I 756
ELW+LLNF+LP IF F+QWFN T GE N EE ++ +
Sbjct: 338 NELWSLLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLNIQETL 397
Query: 757 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLY 800
I+ LH +L+PF+LRRLK++V LP K EY++ M+ LQK +Y
Sbjct: 398 IKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIY 441
Score = 390 (142.3 bits), Expect = 6.7e-101, Sum P(2) = 6.7e-101
Identities = 84/204 (41%), Positives = 128/204 (62%)
Query: 827 LKNT-IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFK 885
L+N ++QLR +CN PF++ N Y ++ ++ R S KF++L+++LP
Sbjct: 577 LQNLKMIQLRNICNSPFIYYN----Y--------PILDQAEVIRNSAKFQVLNQLLPPLL 624
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSY---LRLDGTTKSEDRGELLRKFNEPESKYF 942
+ H+VL+F Q T+++ +LED+ S+ RLDG+T + R E + +FN K+
Sbjct: 625 SSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNN-NPKFK 683
Query: 943 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 1002
+FL STRAGGLG+NL AADTVI+ D+DWNP DLQA DR HRIGQ N V++ R + +S+
Sbjct: 684 VFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSI 743
Query: 1003 EERILAAARYKLNMDEKVIQAGMF 1026
EE +++ + K ++ VIQ G F
Sbjct: 744 EEVLISRSGSKRFLERLVIQMGQF 767
Score = 369 (135.0 bits), Expect = 5.4e-48, Sum P(2) = 5.4e-48
Identities = 79/191 (41%), Positives = 121/191 (63%)
Query: 124 LKNT-IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFK 182
L+N ++QLR +CN PF++ N Y ++ ++ R S KF++L+++LP
Sbjct: 577 LQNLKMIQLRNICNSPFIYYN----Y--------PILDQAEVIRNSAKFQVLNQLLPPLL 624
Query: 183 ETKHRVLMFCQMTQLMTILEDYFIWRDFSY---LRLDGTTKSEDRGELLRKFNEPESKYF 239
+ H+VL+F Q T+++ +LED+ S+ RLDG+T + R E + +FN K+
Sbjct: 625 SSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNN-NPKFK 683
Query: 240 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 299
+FL STRAGGLG+NL AADTVI+ D+DWNP DLQA DR HRIGQ N V++ R + +S+
Sbjct: 684 VFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSI 743
Query: 300 EERILAAARYK 310
EE +++ + K
Sbjct: 744 EEVLISRSGSK 754
Score = 221 (82.9 bits), Expect = 2.6e-50, Sum P(2) = 2.6e-50
Identities = 50/111 (45%), Positives = 66/111 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT--TGEKVELNEEE-----TIL- 52
TPLQN L ELW+LLNF+LP IF F+QWFN T GE N EE ++
Sbjct: 331 TPLQNNLNELWSLLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIK 390
Query: 53 ------IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLY 97
+I+ LH +L+PF+LRRLK++V LP K EY++ M+ LQK +Y
Sbjct: 391 LNIQETLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIY 441
Score = 56 (24.8 bits), Expect = 1.1e-65, Sum P(2) = 1.1e-65
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 823 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY------RTSGKFE- 875
G+R+ +N++ + K + F+ ++ + G+ NT S + ++ K +
Sbjct: 499 GSRSDRNSLKRSYKEADSDEEFEIMDAEDDSLTGRGNTTPSYDEALVKIRHIKSKTKIQS 558
Query: 876 -LLDRILPKF-KETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRK 933
L+D I KE KH L +M QL I FI+ ++ L ++ + ++L +
Sbjct: 559 ILIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIYYNYPILDQAEVIRNSAKFQVLNQ 618
Query: 934 FNEP 937
P
Sbjct: 619 LLPP 622
Score = 56 (24.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY------RTSGKFE- 172
G+R+ +N++ + K + F+ ++ + G+ NT S + ++ K +
Sbjct: 499 GSRSDRNSLKRSYKEADSDEEFEIMDAEDDSLTGRGNTTPSYDEALVKIRHIKSKTKIQS 558
Query: 173 -LLDRILPKF-KETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRK 230
L+D I KE KH L +M QL I FI+ ++ L ++ + ++L +
Sbjct: 559 ILIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIYYNYPILDQAEVIRNSAKFQVLNQ 618
Query: 231 FNEP 234
P
Sbjct: 619 LLPP 622
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 645 (232.1 bits), Expect = 6.7e-101, Sum P(2) = 6.7e-101
Identities = 134/284 (47%), Positives = 184/284 (64%)
Query: 533 KVT--EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLME 590
K+T +Q ++ G+LK+YQ+ GLEW+++L+ N LNGILADEMGLGKT+Q I+ L++L+E
Sbjct: 160 KITNNKQPKLITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIE 219
Query: 591 KKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLT 650
N GP+LV+VP+STLSNW E K+AP V Y G+ R + + N++LT
Sbjct: 220 NGIN-GPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDIDLLQQQETTNIILT 278
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
+YE I+D + L KI WK +I+DEGHR+KN C L + L N S+R+LLTGTPLQN L
Sbjct: 279 SYEISIRDFNKLVKINWKYLIVDEGHRLKNSQCLLIKILKKL-NVSNRLLLTGTPLQNNL 337
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFAT--TGEKVELNEEE-----TIL-------I 756
ELW+LLNF+LP IF F+QWFN T GE N EE ++ +
Sbjct: 338 NELWSLLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLNIQETL 397
Query: 757 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLY 800
I+ LH +L+PF+LRRLK++V LP K EY++ M+ LQK +Y
Sbjct: 398 IKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIY 441
Score = 390 (142.3 bits), Expect = 6.7e-101, Sum P(2) = 6.7e-101
Identities = 84/204 (41%), Positives = 128/204 (62%)
Query: 827 LKNT-IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFK 885
L+N ++QLR +CN PF++ N Y ++ ++ R S KF++L+++LP
Sbjct: 577 LQNLKMIQLRNICNSPFIYYN----Y--------PILDQAEVIRNSAKFQVLNQLLPPLL 624
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSY---LRLDGTTKSEDRGELLRKFNEPESKYF 942
+ H+VL+F Q T+++ +LED+ S+ RLDG+T + R E + +FN K+
Sbjct: 625 SSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNN-NPKFK 683
Query: 943 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 1002
+FL STRAGGLG+NL AADTVI+ D+DWNP DLQA DR HRIGQ N V++ R + +S+
Sbjct: 684 VFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSI 743
Query: 1003 EERILAAARYKLNMDEKVIQAGMF 1026
EE +++ + K ++ VIQ G F
Sbjct: 744 EEVLISRSGSKRFLERLVIQMGQF 767
Score = 369 (135.0 bits), Expect = 5.4e-48, Sum P(2) = 5.4e-48
Identities = 79/191 (41%), Positives = 121/191 (63%)
Query: 124 LKNT-IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFK 182
L+N ++QLR +CN PF++ N Y ++ ++ R S KF++L+++LP
Sbjct: 577 LQNLKMIQLRNICNSPFIYYN----Y--------PILDQAEVIRNSAKFQVLNQLLPPLL 624
Query: 183 ETKHRVLMFCQMTQLMTILEDYFIWRDFSY---LRLDGTTKSEDRGELLRKFNEPESKYF 239
+ H+VL+F Q T+++ +LED+ S+ RLDG+T + R E + +FN K+
Sbjct: 625 SSGHKVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNN-NPKFK 683
Query: 240 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 299
+FL STRAGGLG+NL AADTVI+ D+DWNP DLQA DR HRIGQ N V++ R + +S+
Sbjct: 684 VFLSSTRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSI 743
Query: 300 EERILAAARYK 310
EE +++ + K
Sbjct: 744 EEVLISRSGSK 754
Score = 221 (82.9 bits), Expect = 2.6e-50, Sum P(2) = 2.6e-50
Identities = 50/111 (45%), Positives = 66/111 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT--TGEKVELNEEE-----TIL- 52
TPLQN L ELW+LLNF+LP IF F+QWFN T GE N EE ++
Sbjct: 331 TPLQNNLNELWSLLNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIK 390
Query: 53 ------IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLY 97
+I+ LH +L+PF+LRRLK++V LP K EY++ M+ LQK +Y
Sbjct: 391 LNIQETLIKNLHTILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIY 441
Score = 56 (24.8 bits), Expect = 1.1e-65, Sum P(2) = 1.1e-65
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 823 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY------RTSGKFE- 875
G+R+ +N++ + K + F+ ++ + G+ NT S + ++ K +
Sbjct: 499 GSRSDRNSLKRSYKEADSDEEFEIMDAEDDSLTGRGNTTPSYDEALVKIRHIKSKTKIQS 558
Query: 876 -LLDRILPKF-KETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRK 933
L+D I KE KH L +M QL I FI+ ++ L ++ + ++L +
Sbjct: 559 ILIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIYYNYPILDQAEVIRNSAKFQVLNQ 618
Query: 934 FNEP 937
P
Sbjct: 619 LLPP 622
Score = 56 (24.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY------RTSGKFE- 172
G+R+ +N++ + K + F+ ++ + G+ NT S + ++ K +
Sbjct: 499 GSRSDRNSLKRSYKEADSDEEFEIMDAEDDSLTGRGNTTPSYDEALVKIRHIKSKTKIQS 558
Query: 173 -LLDRILPKF-KETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRK 230
L+D I KE KH L +M QL I FI+ ++ L ++ + ++L +
Sbjct: 559 ILIDAIYQDILKEAKHLKLQNLKMIQLRNICNSPFIYYNYPILDQAEVIRNSAKFQVLNQ 618
Query: 231 FNEP 234
P
Sbjct: 619 LLPP 622
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 997 (356.0 bits), Expect = 1.3e-100, Sum P(3) = 1.3e-100
Identities = 220/498 (44%), Positives = 306/498 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 915 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 973
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 974 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1032
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 1033 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 1091
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL P+ F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1092 EELFSLLHFLEPTRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1138
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 1139 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KGG-GQANVPNLLNT 1194
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + + S PD + + +GK L+D++LPK K
Sbjct: 1195 MMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLIDKLLPKLK 1253
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FL
Sbjct: 1254 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1313
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 1314 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1373
Query: 1006 ILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1374 MFDKASLKLGLDKAVLQS 1391
Score = 617 (222.3 bits), Expect = 3.1e-57, Sum P(2) = 3.1e-57
Identities = 137/320 (42%), Positives = 193/320 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P+ F S +TF Q F +L EE + ++L +
Sbjct: 1085 TPLQNTVEELFSLLHFLEPTRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 1131
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1132 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KGG-GQAN 1187
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + + S PD + + +GK L+D
Sbjct: 1188 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLID 1246
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1247 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1306
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT
Sbjct: 1307 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1366
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1367 RNSYEREMFDKASLKLGLDK 1386
Score = 68 (29.0 bits), Expect = 3.1e-57, Sum P(2) = 3.1e-57
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V +L GE+AP K + EWL HP
Sbjct: 2511 RIPVINLEDGTRLVGEEAPKNKDLVEWLKLHP 2542
Score = 60 (26.2 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 2589 RVPVVNKRNGKKMGGAMAPPMKDLPRWLEENP 2620
Score = 44 (20.5 bits), Expect = 1.3e-100, Sum P(3) = 1.3e-100
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QD+ D+A +I ++ E + R VE A +K + +EY NN
Sbjct: 865 DSTWELRQDI---DQA-KI-EEFEKLMSREPETERVERP--PADDWKKSESSREYKNNNK 917
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 918 LREYQLEGVNWLLFNWY 934
Score = 41 (19.5 bits), Expect = 2.7e-100, Sum P(3) = 2.7e-100
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 501 SKAVGEKK-TEDDEYKDAGEEA 521
S+ V K+ TED E+K + EEA
Sbjct: 701 SRQVKRKRYTEDLEFKISDEEA 722
Score = 39 (18.8 bits), Expect = 4.4e-100, Sum P(3) = 4.4e-100
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 70 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
KK S+ + + + + G+ LL+ + R +L D GKT
Sbjct: 904 KKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKT 950
Score = 38 (18.4 bits), Expect = 1.3e-100, Sum P(3) = 1.3e-100
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1076 QKMDAERRKGETKPRLVEI 1094
Q +AE G+++PR VE+
Sbjct: 2148 QDREAELGAGKSEPRGVEV 2166
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 596 (214.9 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 128/337 (37%), Positives = 195/337 (57%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKTVQ IA + LM ++
Sbjct: 191 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 249
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFN-----VLLT 650
GP+LV PLSTL NW+ EF+++ P + Y G+ RR L + K V++T
Sbjct: 250 GPFLVCGPLSTLPNWMAEFKRFTPEIPTMLYHGTQQERRILVKHIHERKGTLQIHPVVIT 309
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
++E ++D++ L WK +I+DEGHR+KN C+L + L F N+ +++LLTGTPLQN L
Sbjct: 310 SFEIAMRDRTTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRF-NADNKLLLTGTPLQNNL 368
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 769
ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 369 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 427
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE----GGAR 825
RRLK +V ++P K E ++ +S Q++ Y + NR I GS + +T E G +
Sbjct: 428 RRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETVELSPTGRPK 487
Query: 826 ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
V K+ + P + + + + + T+V
Sbjct: 488 RRTRKSVDYSKIDDFPNELEKLISQIQPEVDRERTIV 524
Score = 455 (165.2 bits), Expect = 1.6e-100, Sum P(2) = 1.6e-100
Identities = 95/215 (44%), Positives = 140/215 (65%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N ++ LRK CNHP++ + + Q + +V+ SGKF +LDR+LP+ K
Sbjct: 538 LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKVDEELVTN------SGKFLILDRMLPELKT 591
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 945
H+VL+F QMT+++ IL DY +R+F++ RLDG+ +R + + FN +P+ FIFL
Sbjct: 592 RGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTDPD--VFIFL 649
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 650 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTIDQK 709
Query: 1006 ILAAARYKLNMDEKVIQAGMFDQKSTG-SERHEFL 1039
I+ A K +++ +I F +G ++ FL
Sbjct: 710 IVERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFL 744
Score = 455 (165.2 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 95/211 (45%), Positives = 140/211 (66%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N ++ LRK CNHP++ + + Q + +V+ SGKF +LDR+LP+ K
Sbjct: 538 LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKVDEELVTN------SGKFLILDRMLPELKT 591
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 242
H+VL+F QMT+++ IL DY +R+F++ RLDG+ +R + + FN +P+ FIFL
Sbjct: 592 RGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFNTDPD--VFIFL 649
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 650 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTIDQK 709
Query: 303 ILAAARYKLNMDEKEYHRNNTARTQK-LNKA 332
I+ A K +++ H+N+ Q LN++
Sbjct: 710 IVERAAAKRKLEKLIIHKNHFKGGQSGLNQS 740
Score = 240 (89.5 bits), Expect = 9.4e-60, Sum P(2) = 9.4e-60
Identities = 56/164 (34%), Positives = 86/164 (52%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH+
Sbjct: 362 TPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQ 420
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE- 118
+L PFLLRRLK +V ++P K E ++ +S Q++ Y + NR I GS + +T E
Sbjct: 421 ILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETVEL 480
Query: 119 ---GGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 159
G + V K+ + P + + + + + T+V
Sbjct: 481 SPTGRPKRRTRKSVDYSKIDDFPNELEKLISQIQPEVDRERTIV 524
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 956 (341.6 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 199/406 (49%), Positives = 269/406 (66%)
Query: 748 LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRG 807
L +EE +LII RLH V+RPFLLRR K EVE LP K + I+KCDMS QKL Y+ +
Sbjct: 587 LTDEEELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQV---- 642
Query: 808 ILLTDGSEKG-KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD 866
TD G +G G +++L+N +QLRK CNHP++F + C+ P+
Sbjct: 643 ---TDVGRVGLHSGNGKSKSLQNLTMQLRKCCNHPYLFVGADYNMCKK----------PE 689
Query: 867 IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSED 926
I R SGKFELLDR+LPK K+ HR+L+F QMT+L+ +LE Y D+ YLRLDG+TK++
Sbjct: 690 IVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQ 749
Query: 927 RGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIG 986
RG LL++FNEP+S YF+FLLSTRAGGLGLNLQ ADT+IIFDSDWNP D QA+DRAHRIG
Sbjct: 750 RGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIG 809
Query: 987 QKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQX 1046
QK EVRV L+++ S+EE IL A+ K+ +D KVIQAG+F+ ST +R E L+ I+ +
Sbjct: 810 QKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMSKG 869
Query: 1047 XXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET-KPRLVEIKELPDWMVKDD 1105
+N+L ARTE+E +F++MD ERRK E K RL+E KE+P+W +
Sbjct: 870 TSSLGEDVPSERE-INRLAARTEEEFWMFEQMDEERRKKENYKTRLMEEKEVPEWAYTSE 928
Query: 1106 DEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
+ + + +L G+ R+RK+ Y+DSL+D +W+KA+
Sbjct: 929 TQEDKT-----NAKNHFGSLTGK--RKRKEAVYSDSLSDLQWMKAM 967
Score = 923 (330.0 bits), Expect = 1.7e-99, Sum P(3) = 1.7e-99
Identities = 178/345 (51%), Positives = 233/345 (67%)
Query: 511 DDEYKDAGEEATYYSIA-HTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGIL 569
+D+ D E +++A H+ EKVT+Q S++ G+L+ YQ++GL+WMVSLYNN+ NGIL
Sbjct: 350 NDDSNDLLEGERQFNLAIHSIQEKVTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGIL 409
Query: 570 ADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGS 629
ADEMGLGKT+QTIAL+ YL+E K GP+L++ P + L NW EF WAPS + Y GS
Sbjct: 410 ADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGS 469
Query: 630 PLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTL 689
R ++ R+ KFNVL+T Y+ I++DK+ L KI W MI+DEGHR+KNH C L +TL
Sbjct: 470 KEKRTEIRARIAGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTL 529
Query: 690 NTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELN 749
T Y R+LLTGTP+QN L ELW+LLNFLLP IF S FE+WFN PFA G L
Sbjct: 530 GTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGS-ASLT 588
Query: 750 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGIL 809
+EE +LII RLH V+RPFLLRR K EVE LP K + I+KCDMS QKL Y+ +
Sbjct: 589 DEEELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQV------ 642
Query: 810 LTDGSEKG-KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQ 853
TD G +G G +++L+N +QLRK CNHP++F + C+
Sbjct: 643 -TDVGRVGLHSGNGKSKSLQNLTMQLRKCCNHPYLFVGADYNMCK 686
Score = 749 (268.7 bits), Expect = 1.7e-72, Sum P(2) = 1.7e-72
Identities = 151/273 (55%), Positives = 193/273 (70%)
Query: 45 LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRG 104
L +EE +LII RLH V+RPFLLRR K EVE LP K + I+KCDMS QKL Y+ +
Sbjct: 587 LTDEEELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQV---- 642
Query: 105 ILLTDGSEKG-KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD 163
TD G +G G +++L+N +QLRK CNHP++F + C+ P+
Sbjct: 643 ---TDVGRVGLHSGNGKSKSLQNLTMQLRKCCNHPYLFVGADYNMCKK----------PE 689
Query: 164 IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSED 223
I R SGKFELLDR+LPK K+ HR+L+F QMT+L+ +LE Y D+ YLRLDG+TK++
Sbjct: 690 IVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQ 749
Query: 224 RGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIG 283
RG LL++FNEP+S YF+FLLSTRAGGLGLNLQ ADT+IIFDSDWNP D QA+DRAHRIG
Sbjct: 750 RGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIG 809
Query: 284 QKNEVRVLRLITVNSVEERILAAARYKLNMDEK 316
QK EVRV L+++ S+EE IL A+ K+ +D K
Sbjct: 810 QKKEVRVFVLVSIGSIEEVILERAKQKMGIDAK 842
Score = 385 (140.6 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 78/151 (51%), Positives = 98/151 (64%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L ELW+LLNFLLP IF S FE+WFN PFA G L +EE +LII RLH V
Sbjct: 544 TPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGS-ASLTDEEELLIINRLHHV 602
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG-KTGEG 119
+RPFLLRR K EVE LP K + I+KCDMS QKL Y+ + TD G +G G
Sbjct: 603 IRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQV-------TDVGRVGLHSGNG 655
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQ 150
+++L+N +QLRK CNHP++F + C+
Sbjct: 656 KSKSLQNLTMQLRKCCNHPYLFVGADYNMCK 686
Score = 60 (26.2 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 359 LMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNL 393
L ++D+E Y KL + K+++L L +T++ +L
Sbjct: 267 LKSDDQEEYMKLAKESKNEKLTLFLEETNKIFVSL 301
Score = 38 (18.4 bits), Expect = 1.7e-99, Sum P(3) = 1.7e-99
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 1068 TEDELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVE 1109
+EDE K+ +R++ +TK R+ + + + D+E E
Sbjct: 969 SEDEDA--SKVSQKRKRTDTKTRMSNGSKAEAVLSESDEEKE 1008
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 1001 (357.4 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 221/498 (44%), Positives = 306/498 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 965 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1023
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 1024 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1082
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 1083 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 1141
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1142 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1188
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 1189 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQANVPNLLNT 1244
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + + S PD + + +GK L+D++LPK K
Sbjct: 1245 MMELRKCCNHPYLINGAEEKILEEFKETHNAES-PDFQLQAMIQAAGKLVLIDKLLPKLK 1303
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FL
Sbjct: 1304 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1363
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 1364 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1423
Query: 1006 ILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1424 MFDKASLKLGLDKAVLQS 1441
Score = 621 (223.7 bits), Expect = 4.5e-58, Sum P(2) = 4.5e-58
Identities = 138/320 (43%), Positives = 193/320 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S +TF Q F +L EE + ++L +
Sbjct: 1135 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 1181
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1182 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQAN 1237
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + + S PD + + +GK L+D
Sbjct: 1238 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAES-PDFQLQAMIQAAGKLVLID 1296
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1297 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1356
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT
Sbjct: 1357 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1416
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1417 RNSYEREMFDKASLKLGLDK 1436
Score = 72 (30.4 bits), Expect = 4.5e-58, Sum P(2) = 4.5e-58
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V +L GEDAP K + EWL HP
Sbjct: 2568 RIPVINLEDGTRLVGEDAPKNKDLVEWLKLHP 2599
Score = 60 (26.2 bits), Expect = 8.2e-57, Sum P(2) = 8.2e-57
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 2646 RVPVVNKRNGKKMGGAMAPPMKDLPRWLEENP 2677
Score = 45 (20.9 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QD+ D+A +I ++ E + R VE A +K + +EY NN
Sbjct: 915 DSTWERRQDI---DQA-KI-EEFEKLMSREPETERVERP--PADDWKKSESSREYKNNNK 967
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 968 LREYQLEGVNWLLFNWY 984
Score = 41 (19.5 bits), Expect = 8.4e-100, Sum P(2) = 8.4e-100
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 501 SKAVGEKK-TEDDEYKDAGEEA 521
S+ V K+ TED E+K + EEA
Sbjct: 751 SRQVKRKRYTEDLEFKISDEEA 772
Score = 40 (19.1 bits), Expect = 1.4e-53, Sum P(3) = 1.4e-53
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 501 SKAVGEKKTEDDE 513
SK++ EK +E+DE
Sbjct: 2229 SKSISEKGSEEDE 2241
Score = 40 (19.1 bits), Expect = 1.4e-53, Sum P(3) = 1.4e-53
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 454 KLRGEDAPPAKQIKEWLAS 472
K++ + P Q +WLAS
Sbjct: 1697 KVKAQSTQPVVQDADWLAS 1715
Score = 39 (18.8 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 70 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
KK S+ + + + + G+ LL+ + R +L D GKT
Sbjct: 954 KKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKT 1000
Score = 38 (18.4 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 525 SIAHTYHEKVTEQASIMVNGKLKE 548
S AH E+V EQA GK++E
Sbjct: 2158 SSAHIQDERVLEQAE----GKVEE 2177
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 997 (356.0 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 220/498 (44%), Positives = 304/498 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 203 NNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 261
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 262 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 320
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 321 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 379
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL P F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 380 EELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 426
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 427 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KGG-GQANVPNLLNT 482
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + + S PD + + +GK L+D++LPK K
Sbjct: 483 MMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLIDKLLPKLK 541
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F+ P+S F+FL
Sbjct: 542 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFL 601
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 602 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 661
Query: 1006 ILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 662 MFDKASLKLGLDKAVLQS 679
Score = 615 (221.5 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 137/320 (42%), Positives = 191/320 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S +TF Q F +L EE + ++L +
Sbjct: 373 TPLQNTVEELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 419
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 420 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KGG-GQAN 475
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + + S PD + + +GK L+D
Sbjct: 476 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLID 534
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F+ P+
Sbjct: 535 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPD 594
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT
Sbjct: 595 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 654
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 655 RNSYEREMFDKASLKLGLDK 674
Score = 72 (30.4 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V +L GEDAP K + EWL HP
Sbjct: 1807 RIPVINLEDGTRLVGEDAPKNKDLVEWLKLHP 1838
Score = 60 (26.2 bits), Expect = 3.2e-55, Sum P(3) = 3.2e-55
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 1885 RVPVVNKRNGKKMGGAMAPPMKDLPRWLEENP 1916
Score = 44 (20.5 bits), Expect = 3.2e-100, Sum P(2) = 3.2e-100
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QD+ D+A +I ++ E + R + VE A +K + +EY NN
Sbjct: 153 DSTWELKQDI---DQA-KI-EEFEKLMSREPEMERVERP--PADDWKKSESSREYKNNNK 205
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 206 LREYQLEGVNWLLFNWY 222
Score = 43 (20.2 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 30 QWFNAPFA-TTGE-KVELNE---EETILIIRR---LHKVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E K ++++ EE ++ R + +V RP KK S+ +
Sbjct: 145 KWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERP-PADDWKKSESSREYKNN 203
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + G+ LL+ + R +L D GKT
Sbjct: 204 NKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKT 238
Score = 37 (18.1 bits), Expect = 1.8e-56, Sum P(3) = 1.8e-56
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 501 SKAVGEKKTEDDEYKDAGEEAT 522
SKA EKK E++E E++T
Sbjct: 2080 SKAE-EKKNENEEENKDSEKST 2100
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 959 (342.6 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 208/514 (40%), Positives = 310/514 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
KL +QI+G+ W+ + + ILADEMGLGKT+QT+ L L ++ GP+L+ VPL
Sbjct: 266 KLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPL 325
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQGR-----------MKNS----KFNVLL 649
STL+NW E E WAP V Y G AR ++ M+ + KFNV+L
Sbjct: 326 STLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVML 385
Query: 650 TTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
T+YEFI D + L I W +++DE HR++++ K + L+ Y +++LLTGTPLQN
Sbjct: 386 TSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSK-YRIGYKLLLTGTPLQNN 444
Query: 710 LPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL 769
L EL+ LLNFL F TF+ F ++++EE + +RLH++L P +L
Sbjct: 445 LEELFHLLNFLSSGKFNDLQTFQAEFT----------DVSKEEQV---KRLHEILEPHML 491
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKN 829
RRLK +V +P K E+I++ ++S +QK Y+H IL + + G G +L N
Sbjct: 492 RRLKADVLKSMPPKSEFIVRVELSSMQKKFYKH-----ILTKNFKALNQKGGGRVCSLLN 546
Query: 830 TIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKH 889
++ LRK CNHP++F + E+ I + + + + SGK +LL ++L + K H
Sbjct: 547 IMMDLRKCCNHPYLFPSAAEEAT--ISPSG-LYEMSSLTKASGKLDLLSKMLKQLKADNH 603
Query: 890 RVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTR 949
RVL+F QMT+++ +LE + + Y R+DG+ K + R + + +FN+P S++F+FLLSTR
Sbjct: 604 RVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTR 663
Query: 950 AGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAA 1009
AGGLG+NL ADTVIIFDSDWNPH D+QA RAHR+GQK +V + R +T NSVEERI+
Sbjct: 664 AGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQV 723
Query: 1010 ARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
A++K+ + V++ GM +T + E L+ IL
Sbjct: 724 AKHKMMLTHLVVRPGMGGM-TTNFSKDE-LEDIL 755
Score = 586 (211.3 bits), Expect = 5.2e-55, Sum P(2) = 5.2e-55
Identities = 118/280 (42%), Positives = 180/280 (64%)
Query: 32 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSG 91
FN E ++++EE + +RLH++L P +LRRLK +V +P K E+I++ ++S
Sbjct: 460 FNDLQTFQAEFTDVSKEEQV---KRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSS 516
Query: 92 LQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 151
+QK Y+H IL + + G G +L N ++ LRK CNHP++F + E+
Sbjct: 517 MQKKFYKH-----ILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEAT-- 569
Query: 152 IGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFS 211
I + + + + SGK +LL ++L + K HRVL+F QMT+++ +LE + +
Sbjct: 570 ISPSG-LYEMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQ 628
Query: 212 YLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ 271
Y R+DG+ K + R + + +FN+P S++F+FLLSTRAGGLG+NL ADTVIIFDSDWNPH
Sbjct: 629 YDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHN 688
Query: 272 DLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 311
D+QA RAHR+GQK +V + R +T NSVEERI+ A++K+
Sbjct: 689 DVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQVAKHKM 728
Score = 176 (67.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL F TF+ F ++++EE + +RLH++
Sbjct: 439 TPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFT----------DVSKEEQV---KRLHEI 485
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
L P +LRRLK +V +P K E+I++ ++S +QK Y+H+
Sbjct: 486 LEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHI 525
Score = 54 (24.1 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
Identities = 8/17 (47%), Positives = 15/17 (88%)
Query: 1124 ALMGRGSRQRKQVDYTD 1140
++MG+G R RK++DY++
Sbjct: 860 SIMGKGKRIRKEIDYSN 876
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 1000 (357.1 bits), Expect = 5.2e-100, Sum P(2) = 5.2e-100
Identities = 221/498 (44%), Positives = 306/498 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 964 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1022
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 1023 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQSYEMYFKDPQGRVIKGSYKFHAIIT 1081
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 1082 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 1140
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1141 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1187
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 1188 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQANVPNLLNT 1243
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + + S PD + + +GK L+D++LPK K
Sbjct: 1244 MMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLIDKLLPKLK 1302
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FL
Sbjct: 1303 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1362
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 1363 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1422
Query: 1006 ILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1423 MFDKASLKLGLDKAVLQS 1440
Score = 620 (223.3 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 138/320 (43%), Positives = 193/320 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S +TF Q F +L EE + ++L +
Sbjct: 1134 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 1180
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1181 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQAN 1236
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + + S PD + + +GK L+D
Sbjct: 1237 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLID 1295
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1296 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1355
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT
Sbjct: 1356 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1415
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1416 RNSYEREMFDKASLKLGLDK 1435
Score = 72 (30.4 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V +L GEDAP K + EWL HP
Sbjct: 2566 RIPVINLEDGTRLVGEDAPKNKDLVEWLKLHP 2597
Score = 60 (26.2 bits), Expect = 1.2e-55, Sum P(3) = 1.2e-55
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 2644 RVPVVNKRNGKKMGGAMAPPMKDLPRWLEENP 2675
Score = 44 (20.5 bits), Expect = 5.2e-100, Sum P(2) = 5.2e-100
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QD+ D+A +I ++ E + R VE A +K + +EY NN
Sbjct: 914 DSTWELRQDI---DQA-KI-EEFEKLMSREPETERVERP--PADDWKKSESSREYKNNNK 966
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 967 LREYQLEGVNWLLFNWY 983
Score = 41 (19.5 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 501 SKAVGEKK-TEDDEYKDAGEEA 521
S+ V K+ TED E+K + EEA
Sbjct: 750 SRQVKRKRYTEDLEFKISDEEA 771
Score = 41 (19.5 bits), Expect = 6.6e-57, Sum P(3) = 6.6e-57
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 919 DGTTKSEDRGELLRKFNEPESK 940
DGT+K E++G NE E+K
Sbjct: 2835 DGTSKGEEKGNE----NEEENK 2852
Score = 39 (18.8 bits), Expect = 1.7e-99, Sum P(2) = 1.7e-99
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 70 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
KK S+ + + + + G+ LL+ + R +L D GKT
Sbjct: 953 KKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKT 999
Score = 37 (18.1 bits), Expect = 3.0e-53, Sum P(3) = 3.0e-53
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 501 SKAVGEKKT--EDDEYKDAGEE 520
S A EK EDDE D GE+
Sbjct: 2179 SVATQEKTEGKEDDEEVDGGEK 2200
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 607 (218.7 bits), Expect = 7.3e-100, Sum P(2) = 7.3e-100
Identities = 119/290 (41%), Positives = 183/290 (63%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
+Q + G ++ YQ++G+EW+ L+ N +NGILADEMGLGKT+Q IA + ++EKK L
Sbjct: 223 QQPQLFTGGVMRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKKV-L 281
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFN-----VLLT 650
GP+LV+ PLSTL NW+ EF+++ P +V+ Y G R L +++ + + V++T
Sbjct: 282 GPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCPVVVT 341
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
++E ++D+ L + W +I+DEGHR+KN +C+L Q L + +++LLTGTPLQN L
Sbjct: 342 SFEIAMRDRKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKML-PTDNKLLLTGTPLQNNL 400
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATT-GEKVELNEEETILIIRRLHKVLRPFLL 769
ELW+LLNFLLP +F +FE WF+ T+ E + NE E I+ LH +L PFLL
Sbjct: 401 SELWSLLNFLLPDVFDDLKSFESWFDISTITSDAENIVANEREQN-ILHMLHLILTPFLL 459
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
RRLK +V ++P K E ++ ++ Q+ Y + N+ I G EK ++
Sbjct: 460 RRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKLLGQEKDES 509
Score = 449 (163.1 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 96/199 (48%), Positives = 129/199 (64%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N ++ L++ CNH ++ IE G + SGKF +LDR+LP+ K+
Sbjct: 576 LQNILMLLKRCCNHAYL---IEYPLDPTTGDFKI---DEQLVEASGKFLILDRMLPELKK 629
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 242
H+VL+F QMT ++ IL DY R + Y RLDG+ DR E ++KF+ +PE F+FL
Sbjct: 630 RGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPE--VFLFL 687
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
LSTRAGGLG+NL +ADTVIIFDSDWNP DLQAQDR HRIGQ V V RLIT N+++E+
Sbjct: 688 LSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEK 747
Query: 303 ILAAARYKLNMDEKEYHRN 321
IL A K +++ H+N
Sbjct: 748 ILERASAKRKLEKMVIHKN 766
Score = 448 (162.8 bits), Expect = 7.3e-100, Sum P(2) = 7.3e-100
Identities = 97/201 (48%), Positives = 129/201 (64%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N ++ L++ CNH ++ IE G + SGKF +LDR+LP+ K+
Sbjct: 576 LQNILMLLKRCCNHAYL---IEYPLDPTTGDFKI---DEQLVEASGKFLILDRMLPELKK 629
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 945
H+VL+F QMT ++ IL DY R + Y RLDG+ DR E ++KF+ +PE F+FL
Sbjct: 630 RGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPE--VFLFL 687
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
LSTRAGGLG+NL +ADTVIIFDSDWNP DLQAQDR HRIGQ V V RLIT N+++E+
Sbjct: 688 LSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEK 747
Query: 1006 ILAAARYKLNMDEKVIQAGMF 1026
IL A K +++ VI F
Sbjct: 748 ILERASAKRKLEKMVIHKNKF 768
Score = 235 (87.8 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 49/117 (41%), Positives = 69/117 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT-GEKVELNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP +F +FE WF+ T+ E + NE E I+ LH
Sbjct: 394 TPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDISTITSDAENIVANEREQN-ILHMLHL 452
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+L PFLLRRLK +V ++P K E ++ ++ Q+ Y + N+ I G EK ++
Sbjct: 453 ILTPFLLRRLKSDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKLLGQEKDES 509
Score = 40 (19.1 bits), Expect = 7.5e-57, Sum P(2) = 7.5e-57
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 1127 GRGSRQ-RKQVDYTDSLTD 1144
GR R+ RK V+YT+ TD
Sbjct: 518 GRPKRRSRKVVNYTEPNTD 536
Score = 37 (18.1 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 856 GQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRV 891
G V+S D+ + +L+D+ + K+ K V
Sbjct: 802 GTKGKVISDKDLQILLDRSDLMDQAKKRVKQEKDGV 837
Score = 37 (18.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 153 GQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRV 188
G V+S D+ + +L+D+ + K+ K V
Sbjct: 802 GTKGKVISDKDLQILLDRSDLMDQAKKRVKQEKDGV 837
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 964 (344.4 bits), Expect = 8.1e-100, Sum P(4) = 8.1e-100
Identities = 217/509 (42%), Positives = 309/509 (60%)
Query: 533 KVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K EQ+ NG +L+EYQ++GL W++ + N N ILADEMGLGKT+Q+I L Y +
Sbjct: 845 KKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILL 903
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
GP+L+I PLST++NW EF W NVV Y GS ++R+ +Q GR+
Sbjct: 904 TGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRII 962
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+F ++TT+E I+ L+ I W+C+IIDE HR+KN +CKL + L N H+V
Sbjct: 963 RGAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLM-NLEHKV 1021
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LL+FL P F S STF Q F +L EE + ++
Sbjct: 1022 LLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QK 1068
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG
Sbjct: 1069 LQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 1124
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKF 874
G+ L NT+++LRK CNHP++ + EEK ++ S D + +++GK
Sbjct: 1125 GQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEF-RDTYNPSASDFHLQAMIQSAGKL 1183
Query: 875 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 934
L+D++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F
Sbjct: 1184 VLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRF 1243
Query: 935 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 994
++P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 1244 SKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVY 1303
Query: 995 RLITVNSVEERILAAARYKLNMDEKVIQA 1023
RL+T NS E + A KL +D+ V+Q+
Sbjct: 1304 RLVTRNSYEREMFDRASLKLGLDKAVLQS 1332
Score = 598 (215.6 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 135/320 (42%), Positives = 193/320 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S STF Q F +L EE + ++L +
Sbjct: 1026 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQAI 1072
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1073 LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGQTN 1128
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLD 175
L NT+++LRK CNHP++ + EEK ++ S D + +++GK L+D
Sbjct: 1129 VPNLVNTMMELRKCCNHPYLIKGAEEKILGEF-RDTYNPSASDFHLQAMIQSAGKLVLID 1187
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F++P+
Sbjct: 1188 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 1247
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T
Sbjct: 1248 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVT 1307
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1308 RNSYEREMFDRASLKLGLDK 1327
Score = 72 (30.4 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V +L G+DAP K + WL HPG+
Sbjct: 2477 VPVINLKDGTRLAGDDAPKRKDLDRWLKEHPGY 2509
Score = 48 (22.0 bits), Expect = 8.1e-100, Sum P(4) = 8.1e-100
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 97 YQHLHNRGILLTDG---SEKGKTGEGGARALKNTIVQL 131
+QHLH+R L S K G G L+NT V++
Sbjct: 469 HQHLHSRNHLCLQRQPPSSKKSDGSGTYTKLQNTQVRV 506
Score = 45 (20.9 bits), Expect = 2.4e-96, Sum P(2) = 2.4e-96
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 30 QWFNAPFATTGEKVELNEEETILIIRRLHKVL--RPFL--LRRLKKEVESQLPEKVEY-- 83
+W + P+ + EL E+ + I ++ RP L R + ++ + EY
Sbjct: 798 KWCSLPYEDS--TWELKEDVDLAKIEEFEQLQASRPDTRHLDRPPSNIWKKIEQSREYKN 855
Query: 84 ---IIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + GL LL+ + R +L D GKT
Sbjct: 856 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKT 891
Score = 44 (20.5 bits), Expect = 8.1e-100, Sum P(4) = 8.1e-100
Identities = 7/27 (25%), Positives = 19/27 (70%)
Query: 197 LMTILEDYFI-WRDFSYLRLDGTTKSE 222
+M +E++F+ ++++SYL + T+ +
Sbjct: 708 VMLDIEEFFVKYKNYSYLHCEWATEQQ 734
Score = 43 (20.2 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 759 RLHKVLRPFLLRRLK----KEVESQLPEKVEYIIKCDMSG 794
R+ K RPF + + E ES+ EK + CD SG
Sbjct: 1448 RIRKQTRPFSATKDELAELSEAESEGEEKPKLRRPCDRSG 1487
Score = 41 (19.5 bits), Expect = 8.1e-100, Sum P(4) = 8.1e-100
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 513 EYKDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
E KD GE YY + + Y + E + K++E++
Sbjct: 784 EDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFE 824
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 1001 (357.4 bits), Expect = 8.3e-100, Sum P(2) = 8.3e-100
Identities = 221/498 (44%), Positives = 306/498 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 955 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1013
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 1014 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1072
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 1073 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 1131
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1132 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1178
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 1179 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQANVPNLLNT 1234
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + + S PD + + +GK L+D++LPK K
Sbjct: 1235 MMELRKCCNHPYLINGAEEKILEEFKETHNAES-PDFQLQAMIQAAGKLVLIDKLLPKLK 1293
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FL
Sbjct: 1294 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1353
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 1354 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1413
Query: 1006 ILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1414 MFDKASLKLGLDKAVLQS 1431
Score = 621 (223.7 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 138/320 (43%), Positives = 193/320 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S +TF Q F +L EE + ++L +
Sbjct: 1125 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 1171
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1172 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQAN 1227
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + + S PD + + +GK L+D
Sbjct: 1228 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAES-PDFQLQAMIQAAGKLVLID 1286
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1287 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1346
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT
Sbjct: 1347 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1406
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1407 RNSYEREMFDKASLKLGLDK 1426
Score = 69 (29.3 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V +L GEDAP K + +WL HP
Sbjct: 2557 RIPVINLEDGTRLVGEDAPKNKDLVDWLKLHP 2588
Score = 60 (26.2 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 2635 RVPVVNKRNGKKMGGAMAPPMKDLPRWLEENP 2666
Score = 43 (20.2 bits), Expect = 8.7e-54, Sum P(3) = 8.7e-54
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 518 GEEATYYSIAHTYHEKVTEQASIMVNGKLKE 548
G+ S AH + EK EQA GK +E
Sbjct: 2141 GQTPPVISSAHVHEEKAMEQAE----GKAEE 2167
Score = 41 (19.5 bits), Expect = 8.3e-100, Sum P(2) = 8.3e-100
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 501 SKAVGEKK-TEDDEYKDAGEEA 521
S+ V K+ TED E+K + EEA
Sbjct: 741 SRQVKRKRYTEDLEFKISDEEA 762
Score = 41 (19.5 bits), Expect = 1.4e-53, Sum P(3) = 1.4e-53
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 501 SKAVGEKKTEDDE 513
SK+V EK +E+DE
Sbjct: 2218 SKSVSEKGSEEDE 2230
Score = 39 (18.8 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 70 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
KK S+ + + + + G+ LL+ + R +L D GKT
Sbjct: 944 KKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKT 990
Score = 39 (18.8 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QD+ D+ +I ++ E + R VE A +K + +EY NN
Sbjct: 905 DSTWELKQDI---DQT-KI-EEFEKLMSREPETERVERP--PADDWKKSESSREYKNNNK 957
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 958 LREYQLEGVNWLLFNWY 974
Score = 39 (18.8 bits), Expect = 1.7e-56, Sum P(3) = 1.7e-56
Identities = 6/10 (60%), Positives = 10/10 (100%)
Query: 919 DGTTKSEDRG 928
DGT+K+E++G
Sbjct: 2827 DGTSKAEEKG 2836
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 996 (355.7 bits), Expect = 8.4e-100, Sum P(2) = 8.4e-100
Identities = 221/498 (44%), Positives = 305/498 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 954 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1012
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 1013 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1071
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 1072 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 1130
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1131 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1177
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 1178 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQANVPNLLNT 1233
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + S PD + + +GK L+D++LPK K
Sbjct: 1234 MMELRKCCNHPYLINGAEEKILEEFKDAHNADS-PDFQLQAMIQAAGKLVLIDKLLPKLK 1292
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FL
Sbjct: 1293 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1352
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 1353 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1412
Query: 1006 ILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1413 MFDKASLKLGLDKAVLQS 1430
Score = 616 (221.9 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 138/320 (43%), Positives = 192/320 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S +TF Q F +L EE + ++L +
Sbjct: 1124 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 1170
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1171 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQAN 1226
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + S PD + + +GK L+D
Sbjct: 1227 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKDAHNADS-PDFQLQAMIQAAGKLVLID 1285
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1286 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1345
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT
Sbjct: 1346 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1405
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1406 RNSYEREMFDKASLKLGLDK 1425
Score = 65 (27.9 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V +L GE+AP K + +WL HP
Sbjct: 2556 RIPVINLEDGTRLVGEEAPKNKDLVDWLKLHP 2587
Score = 60 (26.2 bits), Expect = 5.3e-55, Sum P(3) = 5.3e-55
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 2634 RVPVVNKRNGKKMGGAMAPPMKDLPRWLEENP 2665
Score = 46 (21.3 bits), Expect = 8.4e-100, Sum P(2) = 8.4e-100
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QDL D+A +I ++ E + R VE A +K + +EY NN
Sbjct: 904 DSTWELRQDL---DQA-KI-EEFEKLMSREPETERVERP--PADDWKKSESSREYKNNNK 956
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 957 LREYQLEGVNWLLFNWY 973
Score = 44 (20.5 bits), Expect = 1.7e-52, Sum P(4) = 1.7e-52
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 518 GEEATYYSIAHTYHEKVTEQASIMVNGKLKE 548
G+ + AH + EKV EQA GK +E
Sbjct: 2140 GQAPPVIASAHAHEEKVMEQAE----GKAEE 2166
Score = 41 (19.5 bits), Expect = 2.8e-99, Sum P(2) = 2.8e-99
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 501 SKAVGEKK-TEDDEYKDAGEEA 521
S+ V K+ TED E+K + EEA
Sbjct: 740 SRQVKRKRYTEDLEFKISDEEA 761
Score = 41 (19.5 bits), Expect = 3.5e-52, Sum P(4) = 3.5e-52
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 501 SKAVGEKKTEDDE 513
SK+V EK +E+DE
Sbjct: 2217 SKSVSEKGSEEDE 2229
Score = 39 (18.8 bits), Expect = 4.6e-99, Sum P(2) = 4.6e-99
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 70 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
KK S+ + + + + G+ LL+ + R +L D GKT
Sbjct: 943 KKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKT 989
Score = 39 (18.8 bits), Expect = 1.6e-55, Sum P(3) = 1.6e-55
Identities = 6/10 (60%), Positives = 10/10 (100%)
Query: 919 DGTTKSEDRG 928
DGT+K+E++G
Sbjct: 2826 DGTSKAEEKG 2835
Score = 39 (18.8 bits), Expect = 1.7e-52, Sum P(4) = 1.7e-52
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 454 KLRGEDAPPAKQIKEWLAS 472
K++ + P Q +WLAS
Sbjct: 1686 KVKAQSMQPVVQDADWLAS 1704
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 601 (216.6 bits), Expect = 9.5e-100, Sum P(2) = 9.5e-100
Identities = 124/292 (42%), Positives = 181/292 (61%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKTVQ IA + LM ++
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 271
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFN-----VLLT 650
GP+LV PLSTL NW+ EF+++ P + Y GS RR L + K V++T
Sbjct: 272 GPFLVCGPLSTLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNHIHKRKGTLQIHPVVIT 331
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
++E ++D++VL WK +I+DEGHR+KN C+L + L F N+ +++LLTGTPLQN L
Sbjct: 332 SFEIAMRDRNVLQHCYWKYLIVDEGHRIKNMKCRLIRELKRF-NADNKLLLTGTPLQNNL 390
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 769
ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 449
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 821
RRLK +V ++P K E ++ +S Q++ Y + NR I GS + +T E
Sbjct: 450 RRLKSDVALEVPPKREVVVYAPLSKKQEVFYTAIVNRTITNMFGSSEKETVE 501
Score = 451 (163.8 bits), Expect = 9.5e-100, Sum P(2) = 9.5e-100
Identities = 95/215 (44%), Positives = 140/215 (65%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N ++ LRK CNHP++ + + Q + +V+ SGKF +LDR+LP+ K
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKI 613
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 945
H+VL+F QMT+++ IL DY +R+F++ RLDG+ +R + + FN +P+ FIFL
Sbjct: 614 RGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNTDPD--VFIFL 671
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 672 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731
Query: 1006 ILAAARYKLNMDEKVIQAGMFDQKSTG-SERHEFL 1039
I+ A K +++ +I F +G ++ FL
Sbjct: 732 IVERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFL 766
Score = 451 (163.8 bits), Expect = 8.6e-59, Sum P(2) = 8.6e-59
Identities = 95/211 (45%), Positives = 140/211 (66%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N ++ LRK CNHP++ + + Q + +V+ SGKF +LDR+LP+ K
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKI 613
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 242
H+VL+F QMT+++ IL DY +R+F++ RLDG+ +R + + FN +P+ FIFL
Sbjct: 614 RGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFNTDPD--VFIFL 671
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 672 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731
Query: 303 ILAAARYKLNMDEKEYHRNNTARTQK-LNKA 332
I+ A K +++ H+N+ Q LN++
Sbjct: 732 IVERAAAKRKLEKLIIHKNHFKGGQSGLNQS 762
Score = 236 (88.1 bits), Expect = 8.6e-59, Sum P(2) = 8.6e-59
Identities = 50/119 (42%), Positives = 71/119 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH+
Sbjct: 384 TPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQ 442
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
+L PFLLRRLK +V ++P K E ++ +S Q++ Y + NR I GS + +T E
Sbjct: 443 ILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEVFYTAIVNRTITNMFGSSEKETVE 501
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 949 (339.1 bits), Expect = 1.1e-99, Sum P(4) = 1.1e-99
Identities = 209/508 (41%), Positives = 302/508 (59%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
+K+ + + +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L+ +
Sbjct: 244 QKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLM 303
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ-------GRMKNS- 643
+ GP+L+I PLST++NW EF W N + Y GS ++R+ +Q N
Sbjct: 304 GIH-GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPL 361
Query: 644 ----KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
KF V++TT+E I+ D L KIQW+C++IDE HR+KN +CKL + L H+V
Sbjct: 362 PGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMA-LEHKV 420
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LLNFL P F S + F + F +L EE + ++
Sbjct: 421 LLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KK 467
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + KG
Sbjct: 468 LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 523
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKF 874
+ L NT+++LRK CNHP++ EEK + + ++ PD + + +GK
Sbjct: 524 NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-EAPDFQLQAMIQAAGKL 582
Query: 875 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 934
L+D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F
Sbjct: 583 VLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRF 642
Query: 935 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 994
+P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 643 CKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 702
Query: 995 RLITVNSVEERILAAARYKLNMDEKVIQ 1022
RLIT NS E + A KL +D+ V+Q
Sbjct: 703 RLITRNSYEREMFDKASLKLGLDKAVLQ 730
Score = 590 (212.7 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 138/340 (40%), Positives = 198/340 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL P F S + F + F +L EE + ++L +
Sbjct: 425 TPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 471
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + KG +
Sbjct: 472 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-ANQHN 527
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK L+D
Sbjct: 528 MPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-EAPDFQLQAMIQAAGKLVLID 586
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F +P+
Sbjct: 587 KLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPD 646
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 647 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 706
Query: 296 VNSVEERILAAARYKLNMDE---KEYHRNN-TARTQKLNK 331
NS E + A KL +D+ ++ +R T Q+L+K
Sbjct: 707 RNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSK 746
Score = 48 (22.0 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWL 470
R+ V + +L G AP K++ WL
Sbjct: 1946 RVPVVHKGTGRRLGGATAPALKELPRWL 1973
Score = 47 (21.6 bits), Expect = 1.1e-99, Sum P(4) = 1.1e-99
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1069 EDELTLFQKMDAERRKGETKPRLVEIKELPDWM 1101
E+ + + K R G T P L KELP W+
Sbjct: 1944 EERVPVVHKGTGRRLGGATAPAL---KELPRWL 1973
Score = 45 (20.9 bits), Expect = 1.1e-99, Sum P(4) = 1.1e-99
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 516 DAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
D GEE T+Y + + Y E E + K+KE++
Sbjct: 187 DTGEEVTHYLVKWCSLPYEESTWELEEDVDPVKIKEFE 224
Score = 45 (20.9 bits), Expect = 1.2e-97, Sum P(3) = 1.2e-97
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFL--LRRLKKEVESQLPEKV-EYIIKCDMSGLQKLLY 97
+ V++ E E + I + + RP ++L+K E + ++ EY + G+ LL+
Sbjct: 216 DPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSNQLREY----QLEGMNWLLF 271
Query: 98 QHLHNRGILLTDGSEKGKT 116
+ + +L D GKT
Sbjct: 272 NWYNRKNCILADEMGLGKT 290
Score = 42 (19.8 bits), Expect = 1.1e-99, Sum P(4) = 1.1e-99
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE 222
+E++++ +R+FSYL T E
Sbjct: 112 MEEFYVKYRNFSYLHCKWATLEE 134
Score = 40 (19.1 bits), Expect = 5.7e-99, Sum P(4) = 5.7e-99
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1069 EDELTLFQKMDAERRKGETKPR 1090
EDEL F ++D++ + T+ R
Sbjct: 859 EDELMEFSELDSDSDERPTRSR 880
Score = 39 (18.8 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 583 ALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLAR 633
A L M++K++LG ++P V+ + PS + K P R
Sbjct: 1480 AELCEAMQQKRDLGSPAPVLPEHRAMEGVISMGLYGPSLHNYDVKVPPEQR 1530
Score = 39 (18.8 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 24/88 (27%), Positives = 37/88 (42%)
Query: 858 NNTVVS--GPDIYRTSGKFELLDRILPKFKETK--HRVLMFCQMTQLMTILEDYFIWRDF 913
N T +S P+ ++ K LD KE+ R + Q + ED + +F
Sbjct: 808 NRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELM--EF 865
Query: 914 SYLRLDGTTKSEDRGELLRKFNEPESKY 941
S L D S++R R+FNE +Y
Sbjct: 866 SELDSD----SDERPTRSRRFNEKTRRY 889
Score = 38 (18.4 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 613 EFEKWAPSANV---VAYKGSPLARRALQGRMKNSKFNVLLT 650
E +W AN+ VA + + + L G + SKFN +LT
Sbjct: 1968 ELPRWL-DANLEYAVAADWADIVK--LSGYLPESKFNRVLT 2005
Score = 37 (18.1 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKL 798
KE+ L +EY + D + + KL
Sbjct: 1967 KELPRWLDANLEYAVAADWADIVKL 1991
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 949 (339.1 bits), Expect = 1.1e-99, Sum P(4) = 1.1e-99
Identities = 209/508 (41%), Positives = 302/508 (59%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
+K+ + + +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L+ +
Sbjct: 244 QKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLM 303
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ-------GRMKNS- 643
+ GP+L+I PLST++NW EF W N + Y GS ++R+ +Q N
Sbjct: 304 GIH-GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPL 361
Query: 644 ----KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
KF V++TT+E I+ D L KIQW+C++IDE HR+KN +CKL + L H+V
Sbjct: 362 PGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMA-LEHKV 420
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LLNFL P F S + F + F +L EE + ++
Sbjct: 421 LLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KK 467
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + KG
Sbjct: 468 LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 523
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKF 874
+ L NT+++LRK CNHP++ EEK + + ++ PD + + +GK
Sbjct: 524 NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-EAPDFQLQAMIQAAGKL 582
Query: 875 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 934
L+D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F
Sbjct: 583 VLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRF 642
Query: 935 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 994
+P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 643 CKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 702
Query: 995 RLITVNSVEERILAAARYKLNMDEKVIQ 1022
RLIT NS E + A KL +D+ V+Q
Sbjct: 703 RLITRNSYEREMFDKASLKLGLDKAVLQ 730
Score = 590 (212.7 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 138/340 (40%), Positives = 198/340 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL P F S + F + F +L EE + ++L +
Sbjct: 425 TPLQNSVEELFSLLNFLEPQQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 471
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + KG +
Sbjct: 472 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-ANQHN 527
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK L+D
Sbjct: 528 MPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-EAPDFQLQAMIQAAGKLVLID 586
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F +P+
Sbjct: 587 KLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPD 646
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 647 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 706
Query: 296 VNSVEERILAAARYKLNMDE---KEYHRNN-TARTQKLNK 331
NS E + A KL +D+ ++ +R T Q+L+K
Sbjct: 707 RNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSK 746
Score = 48 (22.0 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWL 470
R+ V + +L G AP K++ WL
Sbjct: 1948 RVPVVHKGTGRRLGGATAPALKELPRWL 1975
Score = 47 (21.6 bits), Expect = 1.1e-99, Sum P(4) = 1.1e-99
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1069 EDELTLFQKMDAERRKGETKPRLVEIKELPDWM 1101
E+ + + K R G T P L KELP W+
Sbjct: 1946 EERVPVVHKGTGRRLGGATAPAL---KELPRWL 1975
Score = 45 (20.9 bits), Expect = 1.1e-99, Sum P(4) = 1.1e-99
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 516 DAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
D GEE T+Y + + Y E E + K+KE++
Sbjct: 187 DTGEEVTHYLVKWCSLPYEESTWELEEDVDPVKIKEFE 224
Score = 45 (20.9 bits), Expect = 1.2e-97, Sum P(3) = 1.2e-97
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFL--LRRLKKEVESQLPEKV-EYIIKCDMSGLQKLLY 97
+ V++ E E + I + + RP ++L+K E + ++ EY + G+ LL+
Sbjct: 216 DPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSNQLREY----QLEGMNWLLF 271
Query: 98 QHLHNRGILLTDGSEKGKT 116
+ + +L D GKT
Sbjct: 272 NWYNRKNCILADEMGLGKT 290
Score = 42 (19.8 bits), Expect = 1.1e-99, Sum P(4) = 1.1e-99
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE 222
+E++++ +R+FSYL T E
Sbjct: 112 MEEFYVKYRNFSYLHCKWATLEE 134
Score = 40 (19.1 bits), Expect = 5.8e-99, Sum P(4) = 5.8e-99
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 1069 EDELTLFQKMDAERRKGETKPR 1090
EDEL F ++D++ + T+ R
Sbjct: 859 EDELMEFSELDSDSDERPTRSR 880
Score = 39 (18.8 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 583 ALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLAR 633
A L M++K++LG ++P V+ + PS + K P R
Sbjct: 1480 AELCEAMQQKRDLGSPAPVLPEHRAMEGVISMGLYGPSLHNYDVKVPPEQR 1530
Score = 39 (18.8 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 24/88 (27%), Positives = 37/88 (42%)
Query: 858 NNTVVS--GPDIYRTSGKFELLDRILPKFKETK--HRVLMFCQMTQLMTILEDYFIWRDF 913
N T +S P+ ++ K LD KE+ R + Q + ED + +F
Sbjct: 808 NRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELM--EF 865
Query: 914 SYLRLDGTTKSEDRGELLRKFNEPESKY 941
S L D S++R R+FNE +Y
Sbjct: 866 SELDSD----SDERPTRSRRFNEKTRRY 889
Score = 38 (18.4 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 613 EFEKWAPSANV---VAYKGSPLARRALQGRMKNSKFNVLLT 650
E +W AN+ VA + + + L G + SKFN +LT
Sbjct: 1970 ELPRWL-DANLEYAVAADWADIVK--LSGYLPESKFNRVLT 2007
Score = 37 (18.1 bits), Expect = 1.9e-50, Sum P(3) = 1.9e-50
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKL 798
KE+ L +EY + D + + KL
Sbjct: 1969 KELPRWLDANLEYAVAADWADIVKL 1993
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 997 (356.0 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 220/498 (44%), Positives = 304/498 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 966 NNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1024
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 1025 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1083
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 1084 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 1142
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL P F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1143 EELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1189
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 1190 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KGG-GQANVPNLLNT 1245
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + + S PD + + +GK L+D++LPK K
Sbjct: 1246 MMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLIDKLLPKLK 1304
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F+ P+S F+FL
Sbjct: 1305 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFL 1364
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 1365 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYERE 1424
Query: 1006 ILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1425 MFDKASLKLGLDKAVLQS 1442
Score = 615 (221.5 bits), Expect = 6.5e-56, Sum P(3) = 6.5e-56
Identities = 137/320 (42%), Positives = 191/320 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S +TF Q F +L EE + ++L +
Sbjct: 1136 TPLQNTVEELFSLLHFLEPGRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 1182
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1183 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KGG-GQAN 1238
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + + S PD + + +GK L+D
Sbjct: 1239 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLID 1297
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F+ P+
Sbjct: 1298 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPD 1357
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT
Sbjct: 1358 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLIT 1417
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1418 RNSYEREMFDKASLKLGLDK 1437
Score = 72 (30.4 bits), Expect = 6.5e-56, Sum P(3) = 6.5e-56
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V +L GEDAP K + EWL HP
Sbjct: 2570 RIPVINLEDGTRLVGEDAPKNKDLVEWLKLHP 2601
Score = 60 (26.2 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 2648 RVPVVNKRNGKKMGGAMAPPMKDLPRWLEENP 2679
Score = 44 (20.5 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QD+ D+A +I ++ E + R + VE A +K + +EY NN
Sbjct: 916 DSTWELKQDI---DQA-KI-EEFEKLMSREPEMERVERP--PADDWKKSESSREYKNNNK 968
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 969 LREYQLEGVNWLLFNWY 985
Score = 43 (20.2 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
Identities = 23/95 (24%), Positives = 44/95 (46%)
Query: 30 QWFNAPFA-TTGE-KVELNE---EETILIIRR---LHKVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E K ++++ EE ++ R + +V RP KK S+ +
Sbjct: 908 KWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERP-PADDWKKSESSREYKNN 966
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + G+ LL+ + R +L D GKT
Sbjct: 967 NKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKT 1001
Score = 41 (19.5 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 501 SKAVGEKK-TEDDEYKDAGEEA 521
S+ V K+ TED E+K + EEA
Sbjct: 752 SRQVKRKRYTEDLEFKISDEEA 773
Score = 37 (18.1 bits), Expect = 6.5e-56, Sum P(3) = 6.5e-56
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 501 SKAVGEKKTEDDEYKDAGEEAT 522
SKA EKK E++E E++T
Sbjct: 2843 SKAE-EKKNENEEENKDSEKST 2863
Score = 37 (18.1 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 500 PSKAVGEKK-TEDDEYKDAGEE 520
PS V E+K TE E K G E
Sbjct: 2161 PSTPVQEEKSTEQTESKVEGSE 2182
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 964 (344.4 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 216/508 (42%), Positives = 308/508 (60%)
Query: 533 KVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K +Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKT+Q+I L Y +
Sbjct: 372 KKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILL 430
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
GP+L+I PLST++NW EF W NVV Y GS ++R+ +Q GR+
Sbjct: 431 TGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRII 489
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+F ++TT+E I+ L+ I+W+C+IIDE HR+KN +CKL + L N H+V
Sbjct: 490 RGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM-NLEHKV 548
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LL+FL P F S STF Q F +L EE + ++
Sbjct: 549 LLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QK 595
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG
Sbjct: 596 LQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 651
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN-NTVVSG---PDIYRTSGKFE 875
G+ L NT+++LRK CNHP++ + EEK N S + +++GK
Sbjct: 652 GQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLV 711
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
L+D++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F+
Sbjct: 712 LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFS 771
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
+P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V R
Sbjct: 772 KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYR 831
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQA 1023
L+T NS E + A KL +D+ V+Q+
Sbjct: 832 LVTRNSYEREMFDRASLKLGLDKAVLQS 859
Score = 599 (215.9 bits), Expect = 5.5e-55, P = 5.5e-55
Identities = 135/319 (42%), Positives = 191/319 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S STF Q F +L EE + ++L +
Sbjct: 553 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQAI 599
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 600 LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGQTN 655
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN-NTVVSG---PDIYRTSGKFELLDR 176
L NT+++LRK CNHP++ + EEK N S + +++GK L+D+
Sbjct: 656 VPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDK 715
Query: 177 ILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPES 236
+LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F++P+S
Sbjct: 716 LLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDS 775
Query: 237 KYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITV 296
F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T
Sbjct: 776 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTR 835
Query: 297 NSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 836 NSYEREMFDRASLKLGLDK 854
Score = 43 (20.2 bits), Expect = 1.8e-99, Sum P(2) = 1.8e-99
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 89 MSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ GL LL+ + R +L D GKT
Sbjct: 391 LEGLNWLLFNWYNRRNCILADEMGLGKT 418
Score = 40 (19.1 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 513 EYKDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
E KD GE YY + + Y + E + K++E++
Sbjct: 311 EDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFE 351
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 690 (248.0 bits), Expect = 2.4e-99, Sum P(3) = 2.4e-99
Identities = 151/342 (44%), Positives = 209/342 (61%)
Query: 508 KTEDDEYKDAGEEA-TYYSIAHTYHE-KVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNL 565
K D+ DA A + TY KV + ++ L+EYQ GL+W+V++Y L
Sbjct: 496 KDSSDKIADAAAAARSAQPTGFTYSTTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEKKL 555
Query: 566 NGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVA 625
NGILADEMGLGKT+ TIALL +L K GP+L++VP S + NW EF KW P+ ++
Sbjct: 556 NGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILT 615
Query: 626 YKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCK 684
Y GS R+ QG MK + F+V +TTY +I+D + + +WK +I+DE H +KN +
Sbjct: 616 YFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLIKNWKSQ 675
Query: 685 LTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE 744
QTL F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F+ WF P A E
Sbjct: 676 RWQTLLNF-NSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVE 734
Query: 745 KVE-LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E +N+E +I RLH VLRPFLLRRLK++VE QLP K E++I C +S Q+ LY+
Sbjct: 735 GQEKINKE----VIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDF 790
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQ 845
I T+ + G + + I+QLRK+CNHP +F+
Sbjct: 791 ----IASTE--TQATLTSGSFFGMISIIMQLRKVCNHPDLFE 826
Score = 382 (139.5 bits), Expect = 2.4e-99, Sum P(3) = 2.4e-99
Identities = 76/156 (48%), Positives = 106/156 (67%)
Query: 872 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 931
GK + L +L K K HR L+F QMT+++ +LE + ++Y+RLDG+T E+R L+
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 1134
Query: 932 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 991
++FN K F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1135 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1193
Query: 992 RVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFD 1027
+ RLI+ +++EE IL A K +D VIQ G ++
Sbjct: 1194 HIYRLISESTIEENILKKANQKRVLDNLVIQNGEYN 1229
Score = 365 (133.5 bits), Expect = 3.9e-53, Sum P(2) = 3.9e-53
Identities = 72/146 (49%), Positives = 100/146 (68%)
Query: 169 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 228
GK + L +L K K HR L+F QMT+++ +LE + ++Y+RLDG+T E+R L+
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 1134
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
++FN K F+F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ EV
Sbjct: 1135 QRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1193
Query: 289 RVLRLITVNSVEERILAAARYKLNMD 314
+ RLI+ +++EE IL A K +D
Sbjct: 1194 HIYRLISESTIEENILKKANQKRVLD 1219
Score = 286 (105.7 bits), Expect = 2.2e-53, Sum P(3) = 2.2e-53
Identities = 65/143 (45%), Positives = 90/143 (62%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVE-LNEEETILIIRRLHK 59
TPLQN L ELW+L++FL+P +F+S F+ WF P A E E +N+E +I RLH
Sbjct: 694 TPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKE----VIDRLHN 749
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
VLRPFLLRRLK++VE QLP K E++I C +S Q+ LY+ I T+ + G
Sbjct: 750 VLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDF----IASTE--TQATLTSG 803
Query: 120 GARALKNTIVQLRKLCNHPFMFQ 142
+ + I+QLRK+CNHP +F+
Sbjct: 804 SFFGMISIIMQLRKVCNHPDLFE 826
Score = 51 (23.0 bits), Expect = 2.4e-99, Sum P(3) = 2.4e-99
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
DK+L FLL QT+ Y + L +
Sbjct: 141 DKQLEFLLGQTERYSTMLAE 160
Score = 47 (21.6 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 124 LKNTIVQLRKLCNH--PFMFQNIEE-K--YCQHI-----GQ---NNTVVSGPDIYRTSGK 170
L+N +++L L + P +FQ+ +E K +C I GQ N V+ ++
Sbjct: 696 LQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDR--LHNVLRP 753
Query: 171 FEL--LDRILPKFKETKHRVLMFCQMTQLMTILEDYFI 206
F L L R + K +KH ++FC++++ L + FI
Sbjct: 754 FLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFI 791
Score = 38 (18.4 bits), Expect = 2.2e-53, Sum P(3) = 2.2e-53
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 576 GKTVQTIALLTYLMEKKKNLGPYLVIVPLS 605
G ++ I+ + L++++ NL L +PLS
Sbjct: 880 GDEIKAISTPSELIKQRVNLKDDLEAIPLS 909
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 592 (213.5 bits), Expect = 1.1e-98, Sum P(2) = 1.1e-98
Identities = 131/339 (38%), Positives = 196/339 (57%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKTVQ IA + LM ++
Sbjct: 214 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 272
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFN-----VLLT 650
GP+LV PLSTL NW+ EF+++ P + Y G+ RR L + K V++T
Sbjct: 273 GPFLVCGPLSTLPNWMAEFQRFTPDIPTMLYHGTQQERRKLVKNIHKRKGTLQIHPVVIT 332
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
++E ++D++ L WK +I+DEGHR+KN C+L + L F N+ +++LLTGTPLQN L
Sbjct: 333 SFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRF-NADNKLLLTGTPLQNNL 391
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 769
ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 392 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 450
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDG-SEK-----GKTGEGG 823
RRLK +V ++P K E ++ +S Q++ Y + NR I G SEK TG
Sbjct: 451 RRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGCSEKETVELSPTGRPR 510
Query: 824 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 862
RA K+ + K+ + P + + + + + VV
Sbjct: 511 RRARKS--INYSKIDDFPNELEKLISQMQPEVDRERAVV 547
Score = 454 (164.9 bits), Expect = 1.1e-98, Sum P(2) = 1.1e-98
Identities = 95/215 (44%), Positives = 140/215 (65%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N ++ LRK CNHP++ + + Q + +V+ SGKF +LDR+LP+ K
Sbjct: 561 LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKA 614
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 945
H+VL+F QMT+++ IL DY +R+F++ RLDG+ +R + + FN +P+ FIFL
Sbjct: 615 RGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPD--VFIFL 672
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 673 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 732
Query: 1006 ILAAARYKLNMDEKVIQAGMFDQKSTG-SERHEFL 1039
I+ A K +++ +I F +G ++ FL
Sbjct: 733 IVERAAAKRKLEKLIIHKNHFKGGQSGLNQSKNFL 767
Score = 454 (164.9 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 95/211 (45%), Positives = 140/211 (66%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N ++ LRK CNHP++ + + Q + +V+ SGKF +LDR+LP+ K
Sbjct: 561 LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKA 614
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 242
H+VL+F QMT+++ IL DY +R+F++ RLDG+ +R + + FN +P+ FIFL
Sbjct: 615 RGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFNTDPD--VFIFL 672
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 673 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 732
Query: 303 ILAAARYKLNMDEKEYHRNNTARTQK-LNKA 332
I+ A K +++ H+N+ Q LN++
Sbjct: 733 IVERAAAKRKLEKLIIHKNHFKGGQSGLNQS 763
Score = 236 (88.1 bits), Expect = 4.0e-59, Sum P(2) = 4.0e-59
Identities = 59/166 (35%), Positives = 87/166 (52%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH+
Sbjct: 385 TPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQ 443
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDG-SEK----- 113
+L PFLLRRLK +V ++P K E ++ +S Q++ Y + NR I G SEK
Sbjct: 444 ILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGCSEKETVEL 503
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVV 159
TG RA K+ + K+ + P + + + + + VV
Sbjct: 504 SPTGRPRRRARKS--INYSKIDDFPNELEKLISQMQPEVDRERAVV 547
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 956 (341.6 bits), Expect = 1.2e-98, Sum P(3) = 1.2e-98
Identities = 210/517 (40%), Positives = 308/517 (59%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
+K+ E +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IALL+ +
Sbjct: 833 KKLDESTEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSA 892
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
P+++I PLST++NW EF W N + Y GS +R+ +Q G +
Sbjct: 893 GVQ-SPFMIIAPLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLI 950
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
KF+ L+TT+E I+ D L +I W+C++IDE HR+KN +CKL +L H+V
Sbjct: 951 PGAYKFDALITTFEMILSDCPELREISWRCVVIDEAHRLKNRNCKLLDSLKML-EIEHKV 1009
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LL+FL P+ F S F + F +L EE + ++
Sbjct: 1010 LLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFG----------DLKTEEQV---QK 1056
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK++VE L K E II+ +++ +QK Y+ + R G T
Sbjct: 1057 LQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLS---MGAT 1113
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKF 874
L NT+++LRK CNHP++ EEK + + ++ PD + R++GK
Sbjct: 1114 QNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLA-PDFHLQALVRSAGKL 1172
Query: 875 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 934
LLD++LP+ K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F
Sbjct: 1173 VLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRF 1232
Query: 935 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 994
++P+S F+FLL TRAGGLG+NL AADT +IFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 1233 SKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 1292
Query: 995 RLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKST 1031
RLIT NS E +L A KL +D V+Q+ +++S+
Sbjct: 1293 RLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESS 1329
Score = 595 (214.5 bits), Expect = 1.9e-51, Sum P(4) = 1.9e-51
Identities = 134/319 (42%), Positives = 190/319 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P+ F S F + F +L EE + ++L +
Sbjct: 1014 TPLQNTVEELFSLLHFLEPAQFPSEIEFLREFG----------DLKTEEQV---QKLQSI 1060
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + R G T
Sbjct: 1061 LKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLS---MGATQNSN 1117
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + ++ PD + R++GK LLD
Sbjct: 1118 VPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLA-PDFHLQALVRSAGKLVLLD 1176
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LP+ K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F++P+
Sbjct: 1177 KLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 1236
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT +IFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 1237 SDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1296
Query: 296 VNSVEERILAAARYKLNMD 314
NS E +L A KL +D
Sbjct: 1297 RNSYEREMLDKASLKLGLD 1315
Score = 54 (24.1 bits), Expect = 1.2e-98, Sum P(3) = 1.2e-98
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 1095 KELPDWMVKDDD-EVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEWLKAI 1151
++LP+W+ ++ D EVE M + R+RK+V+ +LT E +K I
Sbjct: 2294 RDLPNWLKENPDYEVEGDMLELLVNRT-------KRKRRRKRVEKGAALTGSERVKVI 2344
Score = 47 (21.6 bits), Expect = 1.2e-98, Sum P(3) = 1.2e-98
Identities = 23/96 (23%), Positives = 41/96 (42%)
Query: 30 QWFNAPFA-TTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVES---QLPEKVEY-- 83
+W + P+ T E E +E + R++ R L+R + S +L E EY
Sbjct: 786 KWCSLPYEDATWELKEDVDEGKVEEFRKIES--RQPRLKRTPRPAASAWKKLDESTEYKN 843
Query: 84 ---IIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + G+ LL+ + + +L D GKT
Sbjct: 844 GNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 879
Score = 43 (20.2 bits), Expect = 3.2e-98, Sum P(3) = 3.2e-98
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 515 KDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
KD GE YY + + Y + E + GK++E++
Sbjct: 774 KDNGEPVVYYLVKWCSLPYEDATWELKEDVDEGKVEEFR 812
Score = 40 (19.1 bits), Expect = 1.9e-51, Sum P(4) = 1.9e-51
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 657 KDKSVLSKIQWKCMIIDEGH 676
KD+ ++++I+ C ++ GH
Sbjct: 2175 KDRILINRIENLCSLVITGH 2194
Score = 38 (18.4 bits), Expect = 3.1e-51, Sum P(4) = 3.1e-51
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 761 HKVLRPFLLRRLKKEVESQLPEKVEY 786
++V+ F + R+KKE ++ PE E+
Sbjct: 1853 YRVVSTFGVERIKKETDA--PEGDEH 1876
Score = 37 (18.1 bits), Expect = 1.9e-51, Sum P(4) = 1.9e-51
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 506 EKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKG 553
+K +ED E+K A A + + V I V + Q++G
Sbjct: 1730 DKYSEDPEFKPATRHAKEM---YEEGDSVNADGEICVEDRSAPMQVEG 1774
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 655 (235.6 bits), Expect = 1.3e-98, Sum P(4) = 1.3e-98
Identities = 136/339 (40%), Positives = 214/339 (63%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NGKLK YQ+KG+ W+ +LY +NGILADEMGLGKTVQ+IALL +L E++ GP+L+I
Sbjct: 524 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 583
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL-----QGRM--KNSKFNVLLTTYEFI 655
P STL+NW EF ++ P V+ Y G+P R+ + Q + +++ F+V++T+Y+ +
Sbjct: 584 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 643
Query: 656 IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWA 715
++D +++W+ M++DE +K+ + L F +R+LLTGTP+QN + ELWA
Sbjct: 644 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF-QCRNRLLLTGTPIQNTMAELWA 702
Query: 716 LLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKK 774
LL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK
Sbjct: 703 LLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKK 758
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKTGEGGAR--ALKNT 830
+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T + +L N
Sbjct: 759 DVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQQAQTTTSSLMNL 817
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 869
++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 818 VMQFRKVCNHPELFERQETWSPFHISLKPYQIS-KFIYR 855
Score = 400 (145.9 bits), Expect = 1.3e-98, Sum P(4) = 1.3e-98
Identities = 78/156 (50%), Positives = 108/156 (69%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1110 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1169
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1170 VADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1228
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
V V RLI ++EERIL A+ K + VI G F
Sbjct: 1229 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF 1264
Score = 384 (140.2 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 74/143 (51%), Positives = 103/143 (72%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1110 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1169
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1170 VADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1228
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLI ++EERIL A+ K
Sbjct: 1229 VTVYRLICKGTIEERILQRAKEK 1251
Score = 303 (111.7 bits), Expect = 4.7e-59, Sum P(2) = 4.7e-59
Identities = 67/171 (39%), Positives = 104/171 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + E K ++E + + RLH
Sbjct: 691 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHM 746
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKTG 117
+L+PF+LRR+KK+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T
Sbjct: 747 ILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQ 805
Query: 118 EGGAR--ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 166
+ +L N ++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 806 QAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQIS-KFIYR 855
Score = 52 (23.4 bits), Expect = 1.3e-98, Sum P(4) = 1.3e-98
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 261 IIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHR 320
+I ++ H + +D H G + E+ LR + +S + +I +N+ +++Y
Sbjct: 397 LITQTELYAHFMSRKRDMGHD-GIQEEI--LRKLEDSSAQRQIDIGGGVVVNITQEDYDS 453
Query: 321 NNTARTQKLNKAIINYHIN 339
N+ + Q L A YHI+
Sbjct: 454 NHF-KAQALKNAENAYHIH 471
Score = 50 (22.7 bits), Expect = 1.3e-98, Sum P(4) = 1.3e-98
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 18 LPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR-LHKVLRPFLLRRLKKEVESQ 76
L SI S + E ++ GE+ + +EEE + + R LH +LR ++L + S+
Sbjct: 126 LKSILLSDESSEADSHSEDNDEGEEEDDDEEEELSLSREDLHNMLRLHKYKKLHQNKYSK 185
Query: 77 LPEKVEY 83
E +Y
Sbjct: 186 EKELQQY 192
Score = 50 (22.7 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 721 LPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR-LHKVLRPFLLRRLKKEVESQ 779
L SI S + E ++ GE+ + +EEE + + R LH +LR ++L + S+
Sbjct: 126 LKSILLSDESSEADSHSEDNDEGEEEDDDEEEELSLSREDLHNMLRLHKYKKLHQNKYSK 185
Query: 780 LPEKVEY 786
E +Y
Sbjct: 186 EKELQQY 192
Score = 41 (19.5 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 185 KHRVLMFCQMTQLMTIL 201
K +LM+CQ+T +L
Sbjct: 767 KIEILMYCQLTSRQKLL 783
Score = 39 (18.8 bits), Expect = 3.0e-97, Sum P(4) = 3.0e-97
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL++QT+ Y
Sbjct: 388 KRQQRKLNFLITQTELY 404
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 663 (238.4 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 135/333 (40%), Positives = 212/333 (63%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NGKLK YQ+KG+ W+ +LY +NGILADEMGLGKTVQ+IALL +L E++ GP+L+I
Sbjct: 517 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 576
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRM-KNSKFNVLLTTYEFIIKDKSV 661
P STL+NW EF ++ P V+ Y G+P R+ + +++ F+V++T+Y+ +++D
Sbjct: 577 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKKKKTLYTQDAPFHVVITSYQLVVQDVKY 636
Query: 662 LSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLL 721
+++W+ M++DE +K+ + L F +R+LLTGTP+QN + ELWALL+F++
Sbjct: 637 FQRVKWQYMVLDEAQALKSSSSVRWKILLQF-QCRNRLLLTGTPIQNTMAELWALLHFIM 695
Query: 722 PSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQL 780
P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK+VE++L
Sbjct: 696 PTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKKDVENEL 751
Query: 781 PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKT--GEGGARALKNTIVQLRK 836
+K+E ++ C ++ QKLLYQ L N+ I + D S G T + +L N ++Q RK
Sbjct: 752 SDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRK 810
Query: 837 LCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 869
+CNHP +F+ E HI +S IYR
Sbjct: 811 VCNHPELFERQETWSPFHISLKPYEIS-KFIYR 842
Score = 400 (145.9 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 78/156 (50%), Positives = 108/156 (69%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1097 SGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1156
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1157 VADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1215
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
V V RLI ++EERIL A+ K + VI G F
Sbjct: 1216 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF 1251
Score = 384 (140.2 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 74/143 (51%), Positives = 103/143 (72%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1097 SGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1156
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1157 VADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1215
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLI ++EERIL A+ K
Sbjct: 1216 VTVYRLICKGTIEERILQRAKEK 1238
Score = 305 (112.4 bits), Expect = 2.8e-59, Sum P(2) = 2.8e-59
Identities = 67/171 (39%), Positives = 104/171 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + E K ++E + + RLH
Sbjct: 678 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHM 733
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKT- 116
+L+PF+LRR+KK+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T
Sbjct: 734 ILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQ 792
Query: 117 -GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 166
+ +L N ++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 793 QAQNTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYEIS-KFIYR 842
Score = 52 (23.4 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 261 IIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHR 320
+I ++ H + +D H G + E+ LR + +S + +I +N+ +++Y
Sbjct: 390 LITQTELYAHFMSRKRDMGHD-GIQEEI--LRKLEDSSTQRQIDIGGGVVVNITQEDYDS 446
Query: 321 NNTARTQKLNKAIINYHIN 339
N+ + Q L A YHI+
Sbjct: 447 NHF-KAQALKNAENAYHIH 464
Score = 41 (19.5 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 185 KHRVLMFCQMTQLMTIL 201
K +LM+CQ+T +L
Sbjct: 754 KIEILMYCQLTSRQKLL 770
Score = 40 (19.1 bits), Expect = 1.4e-98, Sum P(4) = 1.4e-98
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 47 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 83
EEE L LH +LR ++L + S+ E +Y
Sbjct: 149 EEELSLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 185
Score = 40 (19.1 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 750 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 786
EEE L LH +LR ++L + S+ E +Y
Sbjct: 149 EEELSLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 185
Score = 39 (18.8 bits), Expect = 3.3e-97, Sum P(4) = 3.3e-97
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL++QT+ Y
Sbjct: 381 KRQQRKLNFLITQTELY 397
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 675 (242.7 bits), Expect = 1.6e-98, Sum P(3) = 1.6e-98
Identities = 136/320 (42%), Positives = 206/320 (64%)
Query: 541 MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
M+ KLKEYQ+KGL W+V+LY +NGILADEMGLGKT+Q+I+++ YL E GP+LV
Sbjct: 793 MLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLV 852
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ---GRM-----KNSKFNVLLTTY 652
I P STL NW E K+ P+ V+ Y G+ R+ L+ R K S+F+VL+T+Y
Sbjct: 853 IAPASTLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVTSY 912
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
+ ++ D K++W+ MI+DE +K+ ++L F+ +R+LLTGTP+QN + E
Sbjct: 913 QLVVLDAQYFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFH-CRNRLLLTGTPIQNNMQE 971
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VELNEEETILIIRRLHKVLRPFLLRR 771
LWALL+F++P++F S F +WF+ + + +LNE++ +RRLH +L+PF+LRR
Sbjct: 972 LWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ----LRRLHMILKPFMLRR 1027
Query: 772 LKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTG-EGGARALKNT 830
+KK V+ +L +KVE + CD++ Q+ LY +L NR + + D EK G E + L N
Sbjct: 1028 VKKHVQQELGDKVEKDVFCDLTYRQRALYTNLRNR-VSIMDLIEKAAVGDETDSTTLMNL 1086
Query: 831 IVQLRKLCNHPFMFQNIEEK 850
++Q RK+CNHP +F+ E K
Sbjct: 1087 VMQFRKVCNHPDLFERAETK 1106
Score = 394 (143.8 bits), Expect = 1.6e-98, Sum P(3) = 1.6e-98
Identities = 79/154 (51%), Positives = 105/154 (68%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ ++E+Y +R++ Y RLDG+TK EDR +
Sbjct: 1320 SGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDT 1379
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1380 VADFQQ-RPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQ 1438
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAG 1024
V V RLIT +++EERI A K + VI G
Sbjct: 1439 VTVYRLITRSTIEERIRKRALQKEEVQRVVISGG 1472
Score = 384 (140.2 bits), Expect = 3.5e-57, Sum P(3) = 3.5e-57
Identities = 76/143 (53%), Positives = 101/143 (70%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ ++E+Y +R++ Y RLDG+TK EDR +
Sbjct: 1320 SGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRDT 1379
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1380 VADFQQ-RPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQ 1438
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLIT +++EERI A K
Sbjct: 1439 VTVYRLITRSTIEERIRKRALQK 1461
Score = 316 (116.3 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 62/149 (41%), Positives = 97/149 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + + +LNE++ +RRLH
Sbjct: 963 TPIQNNMQELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQ----LRRLHM 1018
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTG-E 118
+L+PF+LRR+KK V+ +L +KVE + CD++ Q+ LY +L NR + + D EK G E
Sbjct: 1019 ILKPFMLRRVKKHVQQELGDKVEKDVFCDLTYRQRALYTNLRNR-VSIMDLIEKAAVGDE 1077
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEK 147
+ L N ++Q RK+CNHP +F+ E K
Sbjct: 1078 TDSTTLMNLVMQFRKVCNHPDLFERAETK 1106
Score = 42 (19.8 bits), Expect = 1.6e-98, Sum P(3) = 1.6e-98
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 361 AEDEEGYRKLIDQKKDKRLAFLLSQTDEY 389
A+ E R+ QK+ +L FL+SQT+ Y
Sbjct: 659 AKRAEAEREANRQKR--KLNFLISQTELY 685
Score = 38 (18.4 bits), Expect = 3.5e-57, Sum P(3) = 3.5e-57
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 816 KGKTGEGGARALKNTIVQLR 835
+G+ G+G A+ K T +LR
Sbjct: 1582 RGRGGKGTAKRAKTTKERLR 1601
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 698 (250.8 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 144/348 (41%), Positives = 222/348 (63%)
Query: 500 PSKAVGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWM 557
P+ +G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+
Sbjct: 584 PTTTLGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWL 639
Query: 558 VSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKW 617
V++Y LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W
Sbjct: 640 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 699
Query: 618 APSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGH 676
PS ++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE
Sbjct: 700 CPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ 759
Query: 677 RMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
+KN + Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+
Sbjct: 760 NIKNFKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFS 818
Query: 737 APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
P TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q
Sbjct: 819 NPL--TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQ 875
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ LY + + K G ++ N ++QLRK+CNHP +F
Sbjct: 876 RCLYDDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 917
Score = 382 (139.5 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 74/159 (46%), Positives = 104/159 (65%)
Query: 868 YRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDR 927
Y +GK + L +L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R
Sbjct: 2027 YDCAGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQR 2086
Query: 928 GELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQ 987
L+ +FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ
Sbjct: 2087 QALMERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQ 2145
Query: 988 KNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
+V + RLI+ +VEE IL A K + + I+ G F
Sbjct: 2146 TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 2184
Score = 368 (134.6 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 71/146 (48%), Positives = 98/146 (67%)
Query: 165 YRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDR 224
Y +GK + L +L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R
Sbjct: 2027 YDCAGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQR 2086
Query: 225 GELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQ 284
L+ +FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ
Sbjct: 2087 QALMERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQ 2145
Query: 285 KNEVRVLRLITVNSVEERILAAARYK 310
+V + RLI+ +VEE IL A K
Sbjct: 2146 TRDVHIYRLISERTVEENILKKANQK 2171
Score = 301 (111.0 bits), Expect = 4.4e-56, Sum P(2) = 4.4e-56
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 786 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 842
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 843 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 896
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 897 FMSVINILMQLRKVCNHPNLF 917
Score = 40 (19.1 bits), Expect = 3.0e-98, Sum P(3) = 3.0e-98
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 230 DLHLDFIVGQTEKYSDLLSQ 249
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 955 (341.2 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 212/495 (42%), Positives = 301/495 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IA L + + GP+LVI PL
Sbjct: 36 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAPL 94
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLLTTY 652
ST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+TT+
Sbjct: 95 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 153
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
E I+ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN + E
Sbjct: 154 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEE 212
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 213 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 259
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
K++VE L K E II+ +++ +QK Y+ + + KG G L NT++
Sbjct: 260 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTNMPNLLNTMM 315
Query: 833 QLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDRILPKFKETK 888
+LRK CNHP++ EEK + ++ + R++GK L+D++LPK K
Sbjct: 316 ELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGG 375
Query: 889 HRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLST 948
H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FLL T
Sbjct: 376 HKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT 435
Query: 949 RAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILA 1008
RAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT NS E +
Sbjct: 436 RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFD 495
Query: 1009 AARYKLNMDEKVIQA 1023
A KL +D+ V+Q+
Sbjct: 496 KASLKLGLDKAVLQS 510
Score = 594 (214.2 bits), Expect = 4.5e-55, P = 4.5e-55
Identities = 135/319 (42%), Positives = 189/319 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S S F + F +L EE + ++L +
Sbjct: 204 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAI 250
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G
Sbjct: 251 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTN 306
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDR 176
L NT+++LRK CNHP++ EEK + ++ + R++GK L+D+
Sbjct: 307 MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK 366
Query: 177 ILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPES 236
+LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S
Sbjct: 367 LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS 426
Query: 237 KYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITV 296
F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 427 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR 486
Query: 297 NSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 487 NSYEREMFDKASLKLGLDK 505
Score = 40 (19.1 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 57 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
L +V RP K E+ + + + + + + G+ LL+ + + +L D GKT
Sbjct: 11 LKRVNRPQASAWKKLELSHEYKNRNQ-LREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 69
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 585 (211.0 bits), Expect = 3.8e-98, Sum P(2) = 3.8e-98
Identities = 121/292 (41%), Positives = 180/292 (61%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKTVQ IA + LM ++
Sbjct: 213 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 271
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFN-----VLLT 650
GP+LV PLSTL NW+ EF+++ P + Y G+ R+ L + K V++T
Sbjct: 272 GPFLVCGPLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVIT 331
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
++E ++D++ L WK +I+DEGHR+KN C+L + L F N+ +++LLTGTPLQN L
Sbjct: 332 SFEIAMRDRNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRF-NADNKLLLTGTPLQNNL 390
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 769
ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 391 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 449
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 821
RRLK +V ++P K E ++ +S Q++ Y + NR I GS + +T E
Sbjct: 450 RRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIE 501
Score = 459 (166.6 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 94/200 (47%), Positives = 134/200 (67%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N ++ LRK CNHP++ + + Q + +V+ SGKF +LDR+LP+ K+
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKK 613
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 242
H+VL+F QMT ++ IL DY RDF++ RLDG+ +R + + FN +PE FIFL
Sbjct: 614 RGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPE--VFIFL 671
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 672 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731
Query: 303 ILAAARYKLNMDEKEYHRNN 322
I+ A K +++ H+N+
Sbjct: 732 IVERAAAKRKLEKLIIHKNH 751
Score = 458 (166.3 bits), Expect = 3.8e-98, Sum P(2) = 3.8e-98
Identities = 95/207 (45%), Positives = 135/207 (65%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N ++ LRK CNHP++ + + Q + +V+ SGKF +LDR+LP+ K+
Sbjct: 560 LQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKK 613
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 945
H+VL+F QMT ++ IL DY RDF++ RLDG+ +R + + FN +PE FIFL
Sbjct: 614 RGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPE--VFIFL 671
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 672 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 731
Query: 1006 ILAAARYKLNMDEKVIQAGMFDQKSTG 1032
I+ A K +++ +I F +G
Sbjct: 732 IVERAAAKRKLEKLIIHKNHFKGGQSG 758
Score = 236 (88.1 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 50/119 (42%), Positives = 71/119 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH+
Sbjct: 384 TPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQ 442
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
+L PFLLRRLK +V ++P K E ++ +S Q++ Y + NR I GS + +T E
Sbjct: 443 ILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIE 501
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 680 (244.4 bits), Expect = 3.8e-98, Sum P(2) = 3.8e-98
Identities = 143/347 (41%), Positives = 206/347 (59%)
Query: 512 DEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILAD 571
D+ KD E+A + V ++ G L+ YQ +GL W+ SLYNN+ NGILAD
Sbjct: 663 DDIKDVEEDAET-KVQEEQLSVVDVPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILAD 721
Query: 572 EMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPL 631
EMGLGKT+QTI+LL YL +K+N GP+L++VP S L NW +EF+++AP V+ Y GSP
Sbjct: 722 EMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQ 781
Query: 632 ARRALQ-GRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLN 690
R+ + G K F+V + +Y+ +++D+ + +W+ M++DE H +KN Q L
Sbjct: 782 QRKEKRKGWNKPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALL 841
Query: 691 TFYNSSHRVLLTGTPLQNKLPELWALLNFLLP---------SIFKSCSTFEQWFNAP--- 738
F N+ R+LLTGTPLQN L ELW+LL FL+P S F F+QWF P
Sbjct: 842 NF-NTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDK 900
Query: 739 FATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKL 798
TG+ ++ET + +LH+VLRP+LLRRLK +VE Q+P K E+I+ C +S Q+
Sbjct: 901 IIETGQNFG-QDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRF 959
Query: 799 LYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQ 845
LY +R K G ++ N ++QLRK+CNHP +F+
Sbjct: 960 LYDDFMSRA------QTKATLASGNFMSIVNCLMQLRKVCNHPNLFE 1000
Score = 379 (138.5 bits), Expect = 3.8e-98, Sum P(2) = 3.8e-98
Identities = 76/176 (43%), Positives = 109/176 (61%)
Query: 854 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 910
H Q ++ PD + GK + L +L + K+ HR L+F QMT+++ +LE + +
Sbjct: 1225 HQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNY 1284
Query: 911 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 970
+ Y+RLDG TK EDR L +FN +S+ +F+LS+R+GGLG+NL ADTVI +DSDW
Sbjct: 1285 HGYLYMRLDGATKIEDRQILTERFNT-DSRITVFILSSRSGGLGINLTGADTVIFYDSDW 1343
Query: 971 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
NP D Q QDR HRIGQ +V + R ++ +++E IL A K +D VIQ G F
Sbjct: 1344 NPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDF 1399
Score = 360 (131.8 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 71/167 (42%), Positives = 104/167 (62%)
Query: 151 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 207
H Q ++ PD + GK + L +L + K+ HR L+F QMT+++ +LE + +
Sbjct: 1225 HQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLNY 1284
Query: 208 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 267
+ Y+RLDG TK EDR L +FN +S+ +F+LS+R+GGLG+NL ADTVI +DSDW
Sbjct: 1285 HGYLYMRLDGATKIEDRQILTERFNT-DSRITVFILSSRSGGLGINLTGADTVIFYDSDW 1343
Query: 268 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
NP D Q QDR HRIGQ +V + R ++ +++E IL A K +D
Sbjct: 1344 NPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLD 1390
Score = 273 (101.2 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 62/154 (40%), Positives = 86/154 (55%)
Query: 1 TPLQNKLPELWALLNFLLP---------SIFKSCSTFEQWFNAP---FATTGEKVELNEE 48
TPLQN L ELW+LL FL+P S F F+QWF P TG+ ++
Sbjct: 854 TPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFG-QDK 912
Query: 49 ETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLT 108
ET + +LH+VLRP+LLRRLK +VE Q+P K E+I+ C +S Q+ LY +R
Sbjct: 913 ETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRA---- 968
Query: 109 DGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQ 142
K G ++ N ++QLRK+CNHP +F+
Sbjct: 969 --QTKATLASGNFMSIVNCLMQLRKVCNHPNLFE 1000
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 587 (211.7 bits), Expect = 3.9e-98, Sum P(2) = 3.9e-98
Identities = 131/341 (38%), Positives = 197/341 (57%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
+Q G ++ YQ++G+EW+ L+ N +NGILADEMGLGKTVQ IA + LM ++
Sbjct: 196 QQPKHFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIA-LMIQRGVP 254
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL----QGRMKNSKFN-VLLT 650
GP+LV PLSTL NW+ EF+++ P + Y G+ RR L R + + V++T
Sbjct: 255 GPFLVCGPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVVT 314
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
++E ++D++ L WK +I+DEGHR+KN C+L + L F N+ +++LLTGTPLQN L
Sbjct: 315 SFEIAMRDQNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRF-NADNKLLLTGTPLQNNL 373
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLL 769
ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH++L PFLL
Sbjct: 374 SELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLL 432
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGS-EK-----GKTGEGG 823
RRLK +V ++P K E ++ + Q++ Y + NR I GS EK TG
Sbjct: 433 RRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPTGRPK 492
Query: 824 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSG 864
R+ K+ + +L P + + + + + TVV G
Sbjct: 493 RRSRKS--INYSELDQFPSELEKLISQIQPEVNRERTVVEG 531
Score = 451 (163.8 bits), Expect = 3.9e-98, Sum P(2) = 3.9e-98
Identities = 96/215 (44%), Positives = 138/215 (64%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N ++ LRK CNHP+M + + Q + +V+ SGKF +LDR+LP+ K+
Sbjct: 543 LRNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKK 596
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 945
H+VL+F QMT ++ IL DY R+F + RLDG+ +R + + FN +P+ F+FL
Sbjct: 597 RGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPD--VFLFL 654
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 655 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 714
Query: 1006 ILAAARYKLNMDEKVIQAGMFDQKSTG-SERHEFL 1039
I+ A K +++ +I F +G S+ FL
Sbjct: 715 IVERAAAKRKLEKLIIHKNHFKGGQSGLSQSKNFL 749
Score = 447 (162.4 bits), Expect = 9.5e-39, P = 9.5e-39
Identities = 92/200 (46%), Positives = 133/200 (66%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N ++ LRK CNHP+M + + Q + +V+ SGKF +LDR+LP+ K+
Sbjct: 543 LRNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKK 596
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 242
H+VL+F QMT ++ IL DY R+F + RLDG+ +R + + FN +P+ F+FL
Sbjct: 597 RGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFNTDPD--VFLFL 654
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 655 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 714
Query: 303 ILAAARYKLNMDEKEYHRNN 322
I+ A K +++ H+N+
Sbjct: 715 IVERAAAKRKLEKLIIHKNH 734
Score = 240 (89.5 bits), Expect = 2.8e-59, Sum P(2) = 2.8e-59
Identities = 59/168 (35%), Positives = 87/168 (51%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH+
Sbjct: 367 TPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQ 425
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGS-EK----- 113
+L PFLLRRLK +V ++P K E ++ + Q++ Y + NR I GS EK
Sbjct: 426 ILTPFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVEL 485
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSG 161
TG R+ K+ + +L P + + + + + TVV G
Sbjct: 486 SPTGRPKRRSRKS--INYSELDQFPSELEKLISQIQPEVNRERTVVEG 531
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 654 (235.3 bits), Expect = 5.5e-98, Sum P(3) = 5.5e-98
Identities = 135/356 (37%), Positives = 219/356 (61%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NGKLK YQ+KG+ W+ +LY +NGILADEMGLGKTVQ+IALL +L E++ GP+L+I
Sbjct: 516 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 575
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL-----QGRM--KNSKFNVLLTTYEFI 655
P STL+NW EF ++ P V+ Y G+P R+ + Q + +N+ F+V++T+Y+ +
Sbjct: 576 PASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLV 635
Query: 656 IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWA 715
++D +++W+ M++DE +K+ + L F +R+LLTGTP+QN + ELWA
Sbjct: 636 VQDVKYFQRVKWQYMVLDEAQALKSSTSVRWKILLQF-QCRNRLLLTGTPIQNTMAELWA 694
Query: 716 LLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKK 774
LL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK
Sbjct: 695 LLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKK 750
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR-GI--LLTDGSEKGKTGEGGARALKNTI 831
+VE++L +K+E + C ++ Q+LLYQ L N+ I LL + +L N +
Sbjct: 751 DVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQAHSTTSSLMNLV 810
Query: 832 VQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKET 887
+Q RK+CNHP +F+ E + H+ ++S ++R + +D K K+T
Sbjct: 811 MQFRKVCNHPDLFERQEIRSPFHMSLKPFIMS-KFLFRHA-ILHTIDHGKTKLKQT 864
Score = 403 (146.9 bits), Expect = 5.5e-98, Sum P(3) = 5.5e-98
Identities = 78/156 (50%), Positives = 108/156 (69%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1131 SGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1190
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1191 VADF-QSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1249
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
V V RLI ++EERIL A+ K + VI G F
Sbjct: 1250 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF 1285
Score = 387 (141.3 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 74/143 (51%), Positives = 103/143 (72%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1131 SGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1190
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1191 VADF-QSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1249
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLI ++EERIL A+ K
Sbjct: 1250 VTVYRLICKGTIEERILQRAKEK 1272
Score = 297 (109.6 bits), Expect = 9.9e-59, Sum P(2) = 9.9e-59
Identities = 65/188 (34%), Positives = 109/188 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + E K ++E + + RLH
Sbjct: 683 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHM 738
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR-GI--LLTDGSEKGKT 116
+L+PF+LRR+KK+VE++L +K+E + C ++ Q+LLYQ L N+ I LL +
Sbjct: 739 ILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQ 798
Query: 117 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDR 176
+L N ++Q RK+CNHP +F+ E + H+ ++S ++R + +D
Sbjct: 799 AHSTTSSLMNLVMQFRKVCNHPDLFERQEIRSPFHMSLKPFIMS-KFLFRHA-ILHTIDH 856
Query: 177 ILPKFKET 184
K K+T
Sbjct: 857 GKTKLKQT 864
Score = 51 (23.0 bits), Expect = 5.5e-98, Sum P(3) = 5.5e-98
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 226 ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQ 284
E+LRK + S+ I + GG+ +N+ D +DSD+ Q L+ A++I Q
Sbjct: 414 EILRKLEDNSSQRQIDI----GGGVMVNVSQED----YDSDYYKSQALKNAKEAYQIHQ 464
Score = 44 (20.5 bits), Expect = 3.0e-97, Sum P(3) = 3.0e-97
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 283 GQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIINYHIN 339
G + +LR + NS + +I +N+ +++Y ++ ++Q L A Y I+
Sbjct: 408 GDCTQEEILRKLEDNSSQRQIDIGGGVMVNVSQEDYD-SDYYKSQALKNAKEAYQIH 463
Score = 39 (18.8 bits), Expect = 1.0e-96, Sum P(3) = 1.0e-96
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL++QT+ Y
Sbjct: 380 KRQQRKLNFLITQTELY 396
Score = 38 (18.4 bits), Expect = 1.1e-59, Sum P(3) = 1.1e-59
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 923 KSEDRGELLRKFNEPESK 940
K E E RK ++PESK
Sbjct: 1331 KREKYAERKRKEDDPESK 1348
Score = 38 (18.4 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 220 KSEDRGELLRKFNEPESK 237
K E E RK ++PESK
Sbjct: 1331 KREKYAERKRKEDDPESK 1348
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 655 (235.6 bits), Expect = 6.8e-98, Sum P(4) = 6.8e-98
Identities = 136/339 (40%), Positives = 214/339 (63%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NGKLK YQ+KG+ W+ +LY +NGILADEMGLGKTVQ+IALL +L E++ GP+L+I
Sbjct: 518 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 577
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL-----QGRM--KNSKFNVLLTTYEFI 655
P STL+NW EF ++ P V+ Y G+P R+ + Q + +++ F+V++T+Y+ +
Sbjct: 578 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 637
Query: 656 IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWA 715
++D +++W+ M++DE +K+ + L F +R+LLTGTP+QN + ELWA
Sbjct: 638 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF-QCRNRLLLTGTPIQNTMAELWA 696
Query: 716 LLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKK 774
LL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK
Sbjct: 697 LLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKK 752
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKTGEGGAR--ALKNT 830
+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T + +L N
Sbjct: 753 DVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQQAQTTTSSLMNL 811
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 869
++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 812 VMQFRKVCNHPELFERQETWSPFHISLKPYQIS-KFIYR 849
Score = 399 (145.5 bits), Expect = 6.8e-98, Sum P(4) = 6.8e-98
Identities = 78/156 (50%), Positives = 107/156 (68%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1104 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1163
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1164 VADFQN-RNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1222
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
V V RLI ++EERIL A+ K + VI G F
Sbjct: 1223 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF 1258
Score = 383 (139.9 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 74/143 (51%), Positives = 102/143 (71%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1104 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1163
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1164 VADFQN-RNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1222
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLI ++EERIL A+ K
Sbjct: 1223 VTVYRLICKGTIEERILQRAKEK 1245
Score = 303 (111.7 bits), Expect = 6.0e-59, Sum P(2) = 6.0e-59
Identities = 67/171 (39%), Positives = 104/171 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + E K ++E + + RLH
Sbjct: 685 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHM 740
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKTG 117
+L+PF+LRR+KK+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T
Sbjct: 741 ILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQ 799
Query: 118 EGGAR--ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 166
+ +L N ++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 800 QAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQIS-KFIYR 849
Score = 52 (23.4 bits), Expect = 6.8e-98, Sum P(4) = 6.8e-98
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 261 IIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHR 320
+I ++ H + +D H G + E+ LR + +S + +I +N+ +++Y
Sbjct: 391 LITQTELYAHFMSRKRDMGHD-GIQEEI--LRKLEDSSTQRQIDIGGGVVVNITQEDYDS 447
Query: 321 NNTARTQKLNKAIINYHIN 339
N+ + Q L A YHI+
Sbjct: 448 NHF-KAQALKNAENAYHIH 465
Score = 44 (20.5 bits), Expect = 6.8e-98, Sum P(4) = 6.8e-98
Identities = 27/108 (25%), Positives = 43/108 (39%)
Query: 44 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
E EEE L LH +LR ++L + S+ E +Y + +GL +
Sbjct: 147 EEEEEELHLSREELHNMLRLHKYKKLHQNKYSKDKELQQY--QYYSAGLLSTYDPFYEQQ 204
Query: 104 GILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 151
LL G +K K E + LK + +++K + E C H
Sbjct: 205 RHLL--GPKKKKFKE--EKKLKAKLKKVKKKRRRDEELSSEESPRCHH 248
Score = 44 (20.5 bits), Expect = 9.9e-32, Sum P(2) = 9.9e-32
Identities = 27/108 (25%), Positives = 43/108 (39%)
Query: 747 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 806
E EEE L LH +LR ++L + S+ E +Y + +GL +
Sbjct: 147 EEEEEELHLSREELHNMLRLHKYKKLHQNKYSKDKELQQY--QYYSAGLLSTYDPFYEQQ 204
Query: 807 GILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 854
LL G +K K E + LK + +++K + E C H
Sbjct: 205 RHLL--GPKKKKFKE--EKKLKAKLKKVKKKRRRDEELSSEESPRCHH 248
Score = 41 (19.5 bits), Expect = 7.4e-31, Sum P(3) = 7.4e-31
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 185 KHRVLMFCQMTQLMTIL 201
K +LM+CQ+T +L
Sbjct: 761 KIEILMYCQLTSRQKLL 777
Score = 39 (18.8 bits), Expect = 1.6e-96, Sum P(4) = 1.6e-96
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL++QT+ Y
Sbjct: 382 KRQQRKLNFLITQTELY 398
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 964 (344.4 bits), Expect = 7.1e-98, Sum P(3) = 7.1e-98
Identities = 216/508 (42%), Positives = 308/508 (60%)
Query: 533 KVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K +Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKT+Q+I L Y +
Sbjct: 847 KKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILL 905
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
GP+L+I PLST++NW EF W NVV Y GS ++R+ +Q GR+
Sbjct: 906 TGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRII 964
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+F ++TT+E I+ L+ I+W+C+IIDE HR+KN +CKL + L N H+V
Sbjct: 965 RGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM-NLEHKV 1023
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LL+FL P F S STF Q F +L EE + ++
Sbjct: 1024 LLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QK 1070
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG
Sbjct: 1071 LQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 1126
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN-NTVVSG---PDIYRTSGKFE 875
G+ L NT+++LRK CNHP++ + EEK N S + +++GK
Sbjct: 1127 GQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLV 1186
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
L+D++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F+
Sbjct: 1187 LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFS 1246
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
+P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V R
Sbjct: 1247 KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYR 1306
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQA 1023
L+T NS E + A KL +D+ V+Q+
Sbjct: 1307 LVTRNSYEREMFDRASLKLGLDKAVLQS 1334
Score = 599 (215.9 bits), Expect = 5.3e-56, Sum P(2) = 5.3e-56
Identities = 135/319 (42%), Positives = 191/319 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S STF Q F +L EE + ++L +
Sbjct: 1028 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQAI 1074
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1075 LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGQTN 1130
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN-NTVVSG---PDIYRTSGKFELLDR 176
L NT+++LRK CNHP++ + EEK N S + +++GK L+D+
Sbjct: 1131 VPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDK 1190
Query: 177 ILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPES 236
+LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F++P+S
Sbjct: 1191 LLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDS 1250
Query: 237 KYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITV 296
F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T
Sbjct: 1251 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTR 1310
Query: 297 NSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1311 NSYEREMFDRASLKLGLDK 1329
Score = 75 (31.5 bits), Expect = 5.3e-56, Sum P(2) = 5.3e-56
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V +L G+DAP K +++WL HPG+
Sbjct: 2490 VPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGY 2522
Score = 49 (22.3 bits), Expect = 7.1e-98, Sum P(3) = 7.1e-98
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 97 YQHLHNRGILLTDG---SEKGKTGEGGARALKNTIVQL 131
+QHLH+R L S K G G L+NT V++
Sbjct: 471 HQHLHDRNRLCLQRQPPSSKKSDGSGTYTKLQNTQVRI 508
Score = 43 (20.2 bits), Expect = 3.9e-96, Sum P(2) = 3.9e-96
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 89 MSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ GL LL+ + R +L D GKT
Sbjct: 866 LEGLNWLLFNWYNRRNCILADEMGLGKT 893
Score = 40 (19.1 bits), Expect = 7.1e-98, Sum P(3) = 7.1e-98
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 513 EYKDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
E KD GE YY + + Y + E + K++E++
Sbjct: 786 EDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFE 826
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 964 (344.4 bits), Expect = 7.1e-98, Sum P(3) = 7.1e-98
Identities = 216/508 (42%), Positives = 308/508 (60%)
Query: 533 KVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K +Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKT+Q+I L Y +
Sbjct: 848 KKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILL 906
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
GP+L+I PLST++NW EF W NVV Y GS ++R+ +Q GR+
Sbjct: 907 TGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRII 965
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+F ++TT+E I+ L+ I+W+C+IIDE HR+KN +CKL + L N H+V
Sbjct: 966 RGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM-NLEHKV 1024
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LL+FL P F S STF Q F +L EE + ++
Sbjct: 1025 LLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QK 1071
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG
Sbjct: 1072 LQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 1127
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN-NTVVSG---PDIYRTSGKFE 875
G+ L NT+++LRK CNHP++ + EEK N S + +++GK
Sbjct: 1128 GQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLV 1187
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
L+D++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F+
Sbjct: 1188 LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFS 1247
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
+P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V R
Sbjct: 1248 KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYR 1307
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQA 1023
L+T NS E + A KL +D+ V+Q+
Sbjct: 1308 LVTRNSYEREMFDRASLKLGLDKAVLQS 1335
Score = 599 (215.9 bits), Expect = 5.4e-56, Sum P(2) = 5.4e-56
Identities = 135/319 (42%), Positives = 191/319 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S STF Q F +L EE + ++L +
Sbjct: 1029 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQAI 1075
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1076 LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGQTN 1131
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN-NTVVSG---PDIYRTSGKFELLDR 176
L NT+++LRK CNHP++ + EEK N S + +++GK L+D+
Sbjct: 1132 VPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDK 1191
Query: 177 ILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPES 236
+LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F++P+S
Sbjct: 1192 LLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDS 1251
Query: 237 KYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITV 296
F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T
Sbjct: 1252 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTR 1311
Query: 297 NSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1312 NSYEREMFDRASLKLGLDK 1330
Score = 75 (31.5 bits), Expect = 5.4e-56, Sum P(2) = 5.4e-56
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V +L G+DAP K +++WL HPG+
Sbjct: 2490 VPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGY 2522
Score = 49 (22.3 bits), Expect = 7.1e-98, Sum P(3) = 7.1e-98
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 97 YQHLHNRGILLTDG---SEKGKTGEGGARALKNTIVQL 131
+QHLH+R L S K G G L+NT V++
Sbjct: 472 HQHLHDRNRLYLQRQPPSSKKSDGSGTYTKLQNTQVRI 509
Score = 43 (20.2 bits), Expect = 3.9e-96, Sum P(2) = 3.9e-96
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 89 MSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ GL LL+ + R +L D GKT
Sbjct: 867 LEGLNWLLFNWYNRRNCILADEMGLGKT 894
Score = 40 (19.1 bits), Expect = 7.1e-98, Sum P(3) = 7.1e-98
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 513 EYKDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
E KD GE YY + + Y + E + K++E++
Sbjct: 787 EDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFE 827
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 964 (344.4 bits), Expect = 9.0e-98, Sum P(3) = 9.0e-98
Identities = 216/508 (42%), Positives = 308/508 (60%)
Query: 533 KVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K +Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKT+Q+I L Y +
Sbjct: 846 KKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILL 904
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
GP+L+I PLST++NW EF W NVV Y GS ++R+ +Q GR+
Sbjct: 905 TGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRII 963
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+F ++TT+E I+ L+ I+W+C+IIDE HR+KN +CKL + L N H+V
Sbjct: 964 RGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM-NLEHKV 1022
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LL+FL P F S STF Q F +L EE + ++
Sbjct: 1023 LLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QK 1069
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG
Sbjct: 1070 LQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 1125
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN-NTVVSG---PDIYRTSGKFE 875
G+ L NT+++LRK CNHP++ + EEK N S + +++GK
Sbjct: 1126 GQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLV 1185
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
L+D++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F+
Sbjct: 1186 LIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFS 1245
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
+P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V R
Sbjct: 1246 KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYR 1305
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQA 1023
L+T NS E + A KL +D+ V+Q+
Sbjct: 1306 LVTRNSYEREMFDRASLKLGLDKAVLQS 1333
Score = 599 (215.9 bits), Expect = 5.3e-56, Sum P(2) = 5.3e-56
Identities = 135/319 (42%), Positives = 191/319 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S STF Q F +L EE + ++L +
Sbjct: 1027 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQAI 1073
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1074 LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGQTN 1129
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQN-NTVVSG---PDIYRTSGKFELLDR 176
L NT+++LRK CNHP++ + EEK N S + +++GK L+D+
Sbjct: 1130 VPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDK 1189
Query: 177 ILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPES 236
+LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F++P+S
Sbjct: 1190 LLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDS 1249
Query: 237 KYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITV 296
F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RL+T
Sbjct: 1250 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTR 1309
Query: 297 NSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1310 NSYEREMFDRASLKLGLDK 1328
Score = 75 (31.5 bits), Expect = 5.3e-56, Sum P(2) = 5.3e-56
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V +L G+DAP K +++WL HPG+
Sbjct: 2487 VPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGY 2519
Score = 48 (22.0 bits), Expect = 9.0e-98, Sum P(3) = 9.0e-98
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 97 YQHLHNRGILLTDG---SEKGKTGEGGARALKNTIVQL 131
+QHLH+R L S K G G L+NT V++
Sbjct: 470 HQHLHDRNHLCLQRQPPSSKKSDGSGTYTKLQNTQVRV 507
Score = 43 (20.2 bits), Expect = 3.9e-96, Sum P(2) = 3.9e-96
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 89 MSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ GL LL+ + R +L D GKT
Sbjct: 865 LEGLNWLLFNWYNRRNCILADEMGLGKT 892
Score = 40 (19.1 bits), Expect = 9.0e-98, Sum P(3) = 9.0e-98
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 513 EYKDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
E KD GE YY + + Y + E + K++E++
Sbjct: 785 EDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFE 825
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 655 (235.6 bits), Expect = 9.0e-98, Sum P(4) = 9.0e-98
Identities = 136/339 (40%), Positives = 214/339 (63%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NGKLK YQ+KG+ W+ +LY +NGILADEMGLGKTVQ+IALL +L E++ GP+L+I
Sbjct: 524 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 583
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL-----QGRM--KNSKFNVLLTTYEFI 655
P STL+NW EF ++ P V+ Y G+P R+ + Q + +++ F+V++T+Y+ +
Sbjct: 584 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 643
Query: 656 IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWA 715
++D +++W+ M++DE +K+ + L F +R+LLTGTP+QN + ELWA
Sbjct: 644 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF-QCRNRLLLTGTPIQNTMAELWA 702
Query: 716 LLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKK 774
LL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK
Sbjct: 703 LLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKK 758
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKTGEGGAR--ALKNT 830
+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T + +L N
Sbjct: 759 DVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQQAQTTTSSLMNL 817
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 869
++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 818 VMQFRKVCNHPELFERQETWSPFHISLKPYQIS-KFIYR 855
Score = 399 (145.5 bits), Expect = 9.0e-98, Sum P(4) = 9.0e-98
Identities = 78/156 (50%), Positives = 107/156 (68%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1110 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1169
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1170 VADFQN-RNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1228
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
V V RLI ++EERIL A+ K + VI G F
Sbjct: 1229 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF 1264
Score = 383 (139.9 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 74/143 (51%), Positives = 102/143 (71%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1110 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1169
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1170 VADFQN-RNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1228
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLI ++EERIL A+ K
Sbjct: 1229 VTVYRLICKGTIEERILQRAKEK 1251
Score = 303 (111.7 bits), Expect = 6.1e-59, Sum P(2) = 6.1e-59
Identities = 67/171 (39%), Positives = 104/171 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + E K ++E + + RLH
Sbjct: 691 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHM 746
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKTG 117
+L+PF+LRR+KK+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T
Sbjct: 747 ILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQ 805
Query: 118 EGGAR--ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 166
+ +L N ++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 806 QAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQIS-KFIYR 855
Score = 53 (23.7 bits), Expect = 9.0e-98, Sum P(4) = 9.0e-98
Identities = 19/79 (24%), Positives = 39/79 (49%)
Query: 261 IIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHR 320
+I ++ H + +D H G + E+ LR + +S++ +I +N+ +++Y
Sbjct: 397 LITQTELYAHFMSRKRDMGHD-GIQEEI--LRKLEDSSMQRQIDIGGGVVVNITQEDYDS 453
Query: 321 NNTARTQKLNKAIINYHIN 339
N+ + Q L A YHI+
Sbjct: 454 NHF-KAQALKNAENAYHIH 471
Score = 42 (19.8 bits), Expect = 9.0e-98, Sum P(4) = 9.0e-98
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 83
E E EEE L LH +LR ++L + S+ E +Y
Sbjct: 150 EDDEEEEEELNLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 192
Score = 42 (19.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 786
E E EEE L LH +LR ++L + S+ E +Y
Sbjct: 150 EDDEEEEEELNLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 192
Score = 41 (19.5 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 185 KHRVLMFCQMTQLMTIL 201
K +LM+CQ+T +L
Sbjct: 767 KIEILMYCQLTSRQKLL 783
Score = 39 (18.8 bits), Expect = 2.6e-96, Sum P(4) = 2.6e-96
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL++QT+ Y
Sbjct: 388 KRQQRKLNFLITQTELY 404
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 698 (250.8 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 144/348 (41%), Positives = 222/348 (63%)
Query: 500 PSKAVGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWM 557
P+ +G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+
Sbjct: 581 PTTTLGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWL 636
Query: 558 VSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKW 617
V++Y LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W
Sbjct: 637 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 696
Query: 618 APSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGH 676
PS ++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE
Sbjct: 697 CPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ 756
Query: 677 RMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
+KN + Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+
Sbjct: 757 NIKNFKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFS 815
Query: 737 APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
P TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q
Sbjct: 816 NPL--TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQ 872
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ LY + + K G ++ N ++QLRK+CNHP +F
Sbjct: 873 RCLYDDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 914
Score = 377 (137.8 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 73/155 (47%), Positives = 102/155 (65%)
Query: 872 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 931
GK + L +L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R L+
Sbjct: 2043 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2102
Query: 932 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 991
+FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 2103 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Query: 992 RVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
+ RLI+ +VEE IL A K + + I+ G F
Sbjct: 2162 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 2196
Score = 363 (132.8 bits), Expect = 5.1e-54, Sum P(2) = 5.1e-54
Identities = 70/142 (49%), Positives = 96/142 (67%)
Query: 169 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 228
GK + L +L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R L+
Sbjct: 2043 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2102
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
+FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 2103 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Query: 289 RVLRLITVNSVEERILAAARYK 310
+ RLI+ +VEE IL A K
Sbjct: 2162 HIYRLISERTVEENILKKANQK 2183
Score = 301 (111.0 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 783 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 839
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 840 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 893
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 894 FMSVINILMQLRKVCNHPNLF 914
Score = 40 (19.1 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 230 DLHLDFIVGQTEKYSDLLSQ 249
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 698 (250.8 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 144/348 (41%), Positives = 222/348 (63%)
Query: 500 PSKAVGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWM 557
P+ +G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+
Sbjct: 582 PTTTLGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWL 637
Query: 558 VSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKW 617
V++Y LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W
Sbjct: 638 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 697
Query: 618 APSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGH 676
PS ++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE
Sbjct: 698 CPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ 757
Query: 677 RMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
+KN + Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+
Sbjct: 758 NIKNFKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFS 816
Query: 737 APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
P TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q
Sbjct: 817 NPL--TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQ 873
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ LY + + K G ++ N ++QLRK+CNHP +F
Sbjct: 874 RCLYDDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 915
Score = 377 (137.8 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 73/155 (47%), Positives = 102/155 (65%)
Query: 872 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 931
GK + L +L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R L+
Sbjct: 2054 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2113
Query: 932 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 991
+FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 2114 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2172
Query: 992 RVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
+ RLI+ +VEE IL A K + + I+ G F
Sbjct: 2173 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 2207
Score = 363 (132.8 bits), Expect = 5.1e-54, Sum P(2) = 5.1e-54
Identities = 70/142 (49%), Positives = 96/142 (67%)
Query: 169 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 228
GK + L +L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R L+
Sbjct: 2054 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2113
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
+FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 2114 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2172
Query: 289 RVLRLITVNSVEERILAAARYK 310
+ RLI+ +VEE IL A K
Sbjct: 2173 HIYRLISERTVEENILKKANQK 2194
Score = 301 (111.0 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 784 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 840
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 841 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 894
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 895 FMSVINILMQLRKVCNHPNLF 915
Score = 40 (19.1 bits), Expect = 1.1e-97, Sum P(3) = 1.1e-97
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 230 DLHLDFIVGQTEKYSDLLSQ 249
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 978 (349.3 bits), Expect = 1.1e-97, Sum P(2) = 1.1e-97
Identities = 219/500 (43%), Positives = 304/500 (60%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L Y + K GP+LVI
Sbjct: 958 NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPFLVIA 1016
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRM-KNS-KFNVLLT 650
PLST+ NW EF W NVV Y GS +RR +Q GR+ K S KF+ ++T
Sbjct: 1017 PLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT 1075
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
T+E I+ D L I W+C++IDE HR+KN +CKL + L + H+VLLTGTPLQN +
Sbjct: 1076 TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMM-DLEHKVLLTGTPLQNTV 1134
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
EL++LL+FL PS F S +TF Q F +L EE + ++L +L+P +LR
Sbjct: 1135 EELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAILKPMMLR 1181
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK++VE L K E II+ +++ +QK Y+ + + KG G+ L NT
Sbjct: 1182 RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQANVPNLLNT 1237
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLDRILPKFK 885
+++LRK CNHP++ EEK + + + S PD + + +GK L+D++LPK K
Sbjct: 1238 MMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLIDKLLPKLK 1296
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FL
Sbjct: 1297 AGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFL 1356
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQ--DLQAQDRAHRIGQKNEVRVLRLITVNSVE 1003
L TRAGGLG+NL AADT IIFDSDWNP QAQ R HRIGQ V++ RLIT NS E
Sbjct: 1357 LCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQARCHRIGQSKSVKIYRLITRNSYE 1416
Query: 1004 ERILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1417 REMFDKASLKLGLDKAVLQS 1436
Score = 598 (215.6 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 136/322 (42%), Positives = 191/322 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S +TF Q F +L EE + ++L +
Sbjct: 1128 TPLQNTVEELFSLLHFLEPSRFPSETTFMQEFG----------DLKTEEQV---QKLQAI 1174
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1175 LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLS---KGG-GQAN 1230
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + + S PD + + +GK L+D
Sbjct: 1231 VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADS-PDFQLQAMIQAAGKLVLID 1289
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K HRVL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1290 KLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPD 1349
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ--DLQAQDRAHRIGQKNEVRVLRL 293
S F+FLL TRAGGLG+NL AADT IIFDSDWNP QAQ R HRIGQ V++ RL
Sbjct: 1350 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQARCHRIGQSKSVKIYRL 1409
Query: 294 ITVNSVEERILAAARYKLNMDE 315
IT NS E + A KL +D+
Sbjct: 1410 ITRNSYEREMFDKASLKLGLDK 1431
Score = 72 (30.4 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V +L GEDAP K + EWL HP
Sbjct: 2562 RIPVINLEDGTRLVGEDAPKNKDLVEWLKLHP 2593
Score = 60 (26.2 bits), Expect = 2.8e-54, Sum P(2) = 2.8e-54
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ V + K+ G APP K + WL +P
Sbjct: 2640 RVPVVNKRNGKKMGGAMAPPMKDLPRWLEENP 2671
Score = 44 (20.5 bits), Expect = 1.1e-97, Sum P(2) = 1.1e-97
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
DS W QD+ D+A +I ++ E + R VE A +K + +EY NN
Sbjct: 908 DSTWELRQDI---DQA-KI-EEFEKLMSREPETERVERP--PADDWKKSESSREYKNNNK 960
Query: 324 ARTQKL---NKAIINYH 337
R +L N + N++
Sbjct: 961 LREYQLEGVNWLLFNWY 977
Score = 39 (18.8 bits), Expect = 3.8e-97, Sum P(2) = 3.8e-97
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 70 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
KK S+ + + + + G+ LL+ + R +L D GKT
Sbjct: 947 KKSESSREYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKT 993
Score = 39 (18.8 bits), Expect = 4.6e-52, Sum P(2) = 4.6e-52
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 454 KLRGEDAPPAKQIKEWLA 471
K++ + A P Q +WLA
Sbjct: 1699 KVKAQSAHPVVQDADWLA 1716
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 656 (236.0 bits), Expect = 1.3e-97, Sum P(4) = 1.3e-97
Identities = 136/339 (40%), Positives = 214/339 (63%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NGKLK YQ+KG+ W+ +LY +NGILADEMGLGKTVQ+IALL +L E++ GP+L+I
Sbjct: 515 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 574
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL-----QGRM--KNSKFNVLLTTYEFI 655
P STL+NW EF ++ P V+ Y G+P R+ + Q + +++ F+V++T+Y+ +
Sbjct: 575 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 634
Query: 656 IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWA 715
++D +++W+ M++DE +K+ + L F +R+LLTGTP+QN + ELWA
Sbjct: 635 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF-QCRNRLLLTGTPIQNTMAELWA 693
Query: 716 LLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKK 774
LL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK
Sbjct: 694 LLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKK 749
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKT--GEGGARALKNT 830
+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T + +L N
Sbjct: 750 DVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQQAQNTTSSLMNL 808
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 869
++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 809 VMQFRKVCNHPELFERQETWSPFHISLKPYHIS-KFIYR 846
Score = 399 (145.5 bits), Expect = 1.3e-97, Sum P(4) = 1.3e-97
Identities = 78/156 (50%), Positives = 107/156 (68%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1100 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1159
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1160 VADFQN-RNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1218
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
V V RLI ++EERIL A+ K + VI G F
Sbjct: 1219 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF 1254
Score = 383 (139.9 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 74/143 (51%), Positives = 102/143 (71%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1100 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1159
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1160 VADFQN-RNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1218
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLI ++EERIL A+ K
Sbjct: 1219 VTVYRLICKGTIEERILQRAKEK 1241
Score = 304 (112.1 bits), Expect = 4.7e-59, Sum P(2) = 4.7e-59
Identities = 67/171 (39%), Positives = 104/171 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + E K ++E + + RLH
Sbjct: 682 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHM 737
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKT- 116
+L+PF+LRR+KK+VE++L +K+E ++ C ++ QKLLYQ L N+ I + D S G T
Sbjct: 738 ILKPFMLRRIKKDVENELSDKIEILMYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQ 796
Query: 117 -GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 166
+ +L N ++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 797 QAQNTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYHIS-KFIYR 846
Score = 52 (23.4 bits), Expect = 1.3e-97, Sum P(4) = 1.3e-97
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 261 IIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHR 320
+I ++ H + +D H G + E+ LR + +S + +I +N+ +++Y
Sbjct: 388 LITQTELYAHFMSRKRDMGHD-GIQEEI--LRKLEDSSTQRQIDIGGGVVVNITQEDYDS 444
Query: 321 NNTARTQKLNKAIINYHIN 339
N+ + Q L A YHI+
Sbjct: 445 NHF-KAQALKNAENAYHIH 462
Score = 41 (19.5 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 185 KHRVLMFCQMTQLMTIL 201
K +LM+CQ+T +L
Sbjct: 758 KIEILMYCQLTSRQKLL 774
Score = 40 (19.1 bits), Expect = 1.3e-97, Sum P(4) = 1.3e-97
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 46 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 83
+EEE L LH +LR ++L + S+ E +Y
Sbjct: 146 DEEELNLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 183
Score = 40 (19.1 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 749 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 786
+EEE L LH +LR ++L + S+ E +Y
Sbjct: 146 DEEELNLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 183
Score = 39 (18.8 bits), Expect = 3.0e-96, Sum P(4) = 3.0e-96
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL++QT+ Y
Sbjct: 379 KRQQRKLNFLITQTELY 395
Score = 38 (18.4 bits), Expect = 2.1e-97, Sum P(4) = 2.1e-97
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
+++ K L+ LL E +SQ + E + L +L H + +
Sbjct: 119 LKKSRKWLKSILLSDESSEADSQSEDDDEEELNLSREELHNMLRLHKYKK 168
Score = 38 (18.4 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 757 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 806
+++ K L+ LL E +SQ + E + L +L H + +
Sbjct: 119 LKKSRKWLKSILLSDESSEADSQSEDDDEEELNLSREELHNMLRLHKYKK 168
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 655 (235.6 bits), Expect = 1.4e-97, Sum P(4) = 1.4e-97
Identities = 136/339 (40%), Positives = 213/339 (62%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NGKLK YQ+KG+ W+ +LY +NGILADEMGLGKTVQ+IALL +L E++ GP+L+I
Sbjct: 517 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 576
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL-----QGRM--KNSKFNVLLTTYEFI 655
P STL+NW EF ++ P V+ Y G+P R+ + Q + +++ F+V++T+Y+ +
Sbjct: 577 PASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLV 636
Query: 656 IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWA 715
++D +++W+ M++DE +K+ + L F +R+LLTGTP+QN + ELWA
Sbjct: 637 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF-QCRNRLLLTGTPIQNTMAELWA 695
Query: 716 LLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKK 774
LL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK
Sbjct: 696 LLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKK 751
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKT--GEGGARALKNT 830
+VE++L +K+E + C ++ QKLLYQ L N+ I + D S G T + +L N
Sbjct: 752 DVENELSDKIEILTYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQQAQNTTSSLMNL 810
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 869
++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 811 VMQFRKVCNHPELFERQETWSPFHISLKPYEIS-KFIYR 848
Score = 400 (145.9 bits), Expect = 1.4e-97, Sum P(4) = 1.4e-97
Identities = 78/156 (50%), Positives = 108/156 (69%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1103 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1162
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1163 VADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1221
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
V V RLI ++EERIL A+ K + VI G F
Sbjct: 1222 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF 1257
Score = 384 (140.2 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 74/143 (51%), Positives = 103/143 (72%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1103 SGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1162
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1163 VADF-QTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1221
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLI ++EERIL A+ K
Sbjct: 1222 VTVYRLICKGTIEERILQRAKEK 1244
Score = 303 (111.7 bits), Expect = 4.7e-59, Sum P(2) = 4.7e-59
Identities = 67/171 (39%), Positives = 103/171 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + E K ++E + + RLH
Sbjct: 684 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHM 739
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKT- 116
+L+PF+LRR+KK+VE++L +K+E + C ++ QKLLYQ L N+ I + D S G T
Sbjct: 740 ILKPFMLRRIKKDVENELSDKIEILTYCQLTSRQKLLYQALKNK-ISIEDLLQSSMGSTQ 798
Query: 117 -GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 166
+ +L N ++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 799 QAQNTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYEIS-KFIYR 848
Score = 52 (23.4 bits), Expect = 1.4e-97, Sum P(4) = 1.4e-97
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 261 IIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHR 320
+I ++ H + +D H G + E+ LR + +S + +I +N+ +++Y
Sbjct: 390 LITQTELYAHFMSRKRDMGHD-GIQEEI--LRKLEDSSTQRQIDIGGGVVVNITQEDYDS 446
Query: 321 NNTARTQKLNKAIINYHIN 339
N+ + Q L A YHI+
Sbjct: 447 NHF-KAQALKNAENAYHIH 464
Score = 40 (19.1 bits), Expect = 1.4e-97, Sum P(4) = 1.4e-97
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 47 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 83
EEE L LH +LR ++L + S+ E +Y
Sbjct: 149 EEELSLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 185
Score = 40 (19.1 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 750 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 786
EEE L LH +LR ++L + S+ E +Y
Sbjct: 149 EEELSLSREELHNMLRLHKYKKLHQNKYSKDKELQQY 185
Score = 39 (18.8 bits), Expect = 3.2e-96, Sum P(4) = 3.2e-96
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL++QT+ Y
Sbjct: 381 KRQQRKLNFLITQTELY 397
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 964 (344.4 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 219/511 (42%), Positives = 313/511 (61%)
Query: 533 KVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K +Q+ NG +L+EYQ++GL W++ + N N ILADEMGLGKT+Q+I L Y +
Sbjct: 845 KKIDQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEVLL 903
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
GP+L+I PLST++NW EF W NVV Y GS ++R+ +Q GR+
Sbjct: 904 TGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRII 962
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+F ++TT+E I+ L+ I+W+C+IIDE HR+KN +CKL + L N H+V
Sbjct: 963 RGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLM-NLEHKV 1021
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LL+FL P F S STF Q F +L EE + ++
Sbjct: 1022 LLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QK 1068
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG
Sbjct: 1069 LQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 1124
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQ-NNTV-VSGPDIY-----RTSG 872
G+ L NT+++LRK CNHP++ + EEK IG+ +T S D + +++G
Sbjct: 1125 GQTNVPNLVNTMMELRKCCNHPYLIKGAEEKI---IGEFRDTYNPSASDFHLQAMIQSAG 1181
Query: 873 KFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLR 932
K L+D++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R +
Sbjct: 1182 KLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAID 1241
Query: 933 KFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR 992
+F++P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+
Sbjct: 1242 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVK 1301
Query: 993 VLRLITVNSVEERILAAARYKLNMDEKVIQA 1023
V RL+T NS E + A KL +D+ V+Q+
Sbjct: 1302 VYRLVTRNSYEREMFDRASLKLGLDKAVLQS 1332
Score = 599 (215.9 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 138/322 (42%), Positives = 196/322 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F S STF Q F +L EE + ++L +
Sbjct: 1026 TPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG----------DLKTEEQV---QKLQAI 1072
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1073 LKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGQTN 1128
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQ-NNTV-VSGPDIY-----RTSGKFEL 173
L NT+++LRK CNHP++ + EEK IG+ +T S D + +++GK L
Sbjct: 1129 VPNLVNTMMELRKCCNHPYLIKGAEEKI---IGEFRDTYNPSASDFHLQAMIQSAGKLVL 1185
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
+D++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F++
Sbjct: 1186 IDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSK 1245
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RL
Sbjct: 1246 PDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRL 1305
Query: 294 ITVNSVEERILAAARYKLNMDE 315
+T NS E + A KL +D+
Sbjct: 1306 VTRNSYEREMFDRASLKLGLDK 1327
Score = 72 (30.4 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V +L G+DAP K + WL HPG+
Sbjct: 2478 VPVINLKDGTRLAGDDAPKRKDLDRWLKEHPGY 2510
Score = 45 (20.9 bits), Expect = 2.4e-96, Sum P(2) = 2.4e-96
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 30 QWFNAPFATTGEKVELNEEETILIIRRLHKVL--RPFL--LRRLKKEVESQLPEKVEY-- 83
+W + P+ + EL E+ + I ++ RP L R + ++ + EY
Sbjct: 798 KWCSLPYEDS--TWELKEDVDLAKIEEFEQLQASRPDTRQLDRPPSNIWKKIDQSREYKN 855
Query: 84 ---IIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + GL LL+ + R +L D GKT
Sbjct: 856 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKT 891
Score = 44 (20.5 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 7/27 (25%), Positives = 19/27 (70%)
Query: 197 LMTILEDYFI-WRDFSYLRLDGTTKSE 222
+M +E++F+ ++++SYL + T+ +
Sbjct: 708 VMLDIEEFFVKYKNYSYLHCEWATEQQ 734
Score = 43 (20.2 bits), Expect = 2.9e-51, Sum P(3) = 2.9e-51
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 759 RLHKVLRPFLLRRLK----KEVESQLPEKVEYIIKCDMSG 794
R+ K RPF + + E ES+ EK + CD SG
Sbjct: 1448 RIRKQTRPFSATKDELAELSEAESEGEEKPKLRRPCDRSG 1487
Score = 42 (19.8 bits), Expect = 1.4e-97, Sum P(3) = 1.4e-97
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 513 EYKDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
E KD GE YY + + Y + E + K++E++
Sbjct: 784 EDKDTGESVVYYLVKWCSLPYEDSTWELKEDVDLAKIEEFE 824
Score = 40 (19.1 bits), Expect = 1.7e-54, Sum P(3) = 1.7e-54
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 717 LNFLLPSIFKSCSTFEQWFNAPFATTGEK-VELNEEET 753
LN LP++ +S +TF+ N K VE+ EE++
Sbjct: 2797 LNLHLPALSQS-NTFDVQKNKSSDLESSKSVEIKEEDS 2833
Score = 38 (18.4 bits), Expect = 2.7e-54, Sum P(3) = 2.7e-54
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 952 GLGLNLQAADTVIIFDSDWNPHQDLQA 978
GL L+L A FD N DL++
Sbjct: 2796 GLNLHLPALSQSNTFDVQKNKSSDLES 2822
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 968 (345.8 bits), Expect = 2.2e-97, Sum P(2) = 2.2e-97
Identities = 214/500 (42%), Positives = 305/500 (61%)
Query: 543 NG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVI 601
NG +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L + GP+LVI
Sbjct: 751 NGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVGIR-GPFLVI 809
Query: 602 VPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLL 649
PLST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+
Sbjct: 810 APLSTITNWEREFGSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALI 868
Query: 650 TTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
TT+E ++ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN
Sbjct: 869 TTFEMVLSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNT 927
Query: 710 LPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLL 769
+ EL++LL+FL P+ F S + F + F +L EE + ++L +L+P +L
Sbjct: 928 VEELFSLLHFLEPTQFSSEAEFLKDFG----------DLKTEEQV---QKLQAILKPMML 974
Query: 770 RRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGEGGARALK 828
RRLK++VE L K E II+ +++ +QK Y+ + + LT G+ + T L
Sbjct: 975 RRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGASQSNTPN-----LL 1029
Query: 829 NTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLDRILPK 883
NT+++LRK CNHP++ EEK + VV PD + R+SGK L+D++LPK
Sbjct: 1030 NTMMELRKCCNHPYLITGAEEKIISEFREATPVVP-PDFHVQAMVRSSGKLVLIDKLLPK 1088
Query: 884 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 943
+ H+VL+F QM + + ILEDY I R + Y R+DG + R + +F+ P+S F+
Sbjct: 1089 LRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFV 1148
Query: 944 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 1003
FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLIT NS E
Sbjct: 1149 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYE 1208
Query: 1004 ERILAAARYKLNMDEKVIQA 1023
+ A KL +D+ V+Q+
Sbjct: 1209 REMFDKASLKLGLDKAVLQS 1228
Score = 611 (220.1 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 137/321 (42%), Positives = 193/321 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P+ F S + F + F +L EE + ++L +
Sbjct: 922 TPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFG----------DLKTEEQV---QKLQAI 968
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGEG 119
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + LT G+ + T
Sbjct: 969 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGASQSNTPN- 1027
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELL 174
L NT+++LRK CNHP++ EEK + VV PD + R+SGK L+
Sbjct: 1028 ----LLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVP-PDFHVQAMVRSSGKLVLI 1082
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
D++LPK + H+VL+F QM + + ILEDY I R + Y R+DG + R + +F+ P
Sbjct: 1083 DKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRP 1142
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V++ RLI
Sbjct: 1143 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLI 1202
Query: 295 TVNSVEERILAAARYKLNMDE 315
T NS E + A KL +D+
Sbjct: 1203 TRNSYEREMFDKASLKLGLDK 1223
Score = 56 (24.8 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V L GE+AP Q+ EWL +P
Sbjct: 2127 RIPVVNQKDGTLLLGEEAPLRCQLPEWLHRNP 2158
Score = 50 (22.7 bits), Expect = 4.6e-55, Sum P(2) = 4.6e-55
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 967 DSDWNPHQDLQAQDRAHRIGQKNEVRVLR-LITVNSVEER-ILAAARYKLNMDEKVIQ 1022
+SD + + QDR H G+ + RV + L+ R IL R+K M+E+ ++
Sbjct: 1367 ESDDDDRPKARRQDRKHGYGRTDCFRVEKHLLVYGWGRWRDILTHGRFKRGMNERDVE 1424
Score = 46 (21.3 bits), Expect = 2.2e-97, Sum P(2) = 2.2e-97
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 515 KDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
KD GE YY + + Y + E + +GK++E++
Sbjct: 682 KDNGEPVVYYLVKWCSLPYEDSTWELKEDVDDGKIEEFK 720
Score = 43 (20.2 bits), Expect = 4.5e-97, Sum P(2) = 4.5e-97
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 30 QWFNAPFA-TTGE-KVELNE---EETILIIRR---LHKVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E K ++++ EE I R L +V RP K E+ + +
Sbjct: 694 KWCSLPYEDSTWELKEDVDDGKIEEFKRIEARQPNLKRVARPAATSWKKLELSREY-QNG 752
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + G+ LL+ + + +L D GKT
Sbjct: 753 NQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 787
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 663 (238.4 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 133/313 (42%), Positives = 196/313 (62%)
Query: 537 QASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLG 596
Q + G L+EYQ GLEW+ +L+++N NGILADEMGLGKT+QTIALL +L +K+N G
Sbjct: 438 QVPFLFRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWG 497
Query: 597 PYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ-GRMKNSKFNVLLTTYEFI 655
P+L+IVP S + NW +EF+K+ P ++ Y G+P R+ + G K ++V +T+Y+ +
Sbjct: 498 PHLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSGWYKPDTWHVCITSYQLV 557
Query: 656 IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWA 715
++D + +W+ MI+DE H +KN + Q+L F N+ HR+LLTGTPLQN L ELW+
Sbjct: 558 LQDHQPFRRKKWQYMILDEAHNIKNFRSQRWQSLLNF-NAEHRLLLTGTPLQNNLVELWS 616
Query: 716 LLNFLLP-------SIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
LL FL+P S F + F+ WF+ P E+ + E + + +LH+VLRP+L
Sbjct: 617 LLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNTVAKLHRVLRPYL 676
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRRLK EVE Q+P K E+++ C +S Q+ LY NR + G ++
Sbjct: 677 LRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRA------RTREILASGNFMSII 730
Query: 829 NTIVQLRKLCNHP 841
N ++QLRK+CNHP
Sbjct: 731 NCLMQLRKVCNHP 743
Score = 387 (141.3 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 82/176 (46%), Positives = 108/176 (61%)
Query: 854 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 910
H ++ PD + GK ++LDR+L HRVL+F QMT+++ ILE +
Sbjct: 970 HQASTRLAIAFPDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNI 1029
Query: 911 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 970
YLRLDG TK E R L +FN + K +F+LSTR+GGLG+NL ADTVI +DSDW
Sbjct: 1030 HGHRYLRLDGATKIEQRQILTERFNN-DDKIPVFILSTRSGGLGINLTGADTVIFYDSDW 1088
Query: 971 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
NP D QAQDR+HRIGQ +V + RLI+ +VE +L A K +D+ VIQ G F
Sbjct: 1089 NPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEF 1144
Score = 367 (134.2 bits), Expect = 3.6e-51, Sum P(3) = 3.6e-51
Identities = 77/168 (45%), Positives = 103/168 (61%)
Query: 151 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 207
H ++ PD + GK ++LDR+L HRVL+F QMT+++ ILE +
Sbjct: 970 HQASTRLAIAFPDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNI 1029
Query: 208 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 267
YLRLDG TK E R L +FN + K +F+LSTR+GGLG+NL ADTVI +DSDW
Sbjct: 1030 HGHRYLRLDGATKIEQRQILTERFNN-DDKIPVFILSTRSGGLGINLTGADTVIFYDSDW 1088
Query: 268 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
NP D QAQDR+HRIGQ +V + RLI+ +VE +L A K +D+
Sbjct: 1089 NPQLDAQAQDRSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDK 1136
Score = 266 (98.7 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
Identities = 58/145 (40%), Positives = 82/145 (56%)
Query: 1 TPLQNKLPELWALLNFLLP-------SIFKSCSTFEQWFNAPFATTGEKVELNEEETILI 53
TPLQN L ELW+LL FL+P S F + F+ WF+ P E+ + E +
Sbjct: 605 TPLQNNLVELWSLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMDRLIEEGQDMNPEAMNT 664
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
+ +LH+VLRP+LLRRLK EVE Q+P K E+++ C +S Q+ LY NR +
Sbjct: 665 VAKLHRVLRPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRA------RTR 718
Query: 114 GKTGEGGARALKNTIVQLRKLCNHP 138
G ++ N ++QLRK+CNHP
Sbjct: 719 EILASGNFMSIINCLMQLRKVCNHP 743
Score = 44 (20.5 bits), Expect = 2.4e-97, Sum P(3) = 2.4e-97
Identities = 18/87 (20%), Positives = 34/87 (39%)
Query: 1017 DEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQ 1076
DE+ +QA +K + E+ EF +T Q + +E +
Sbjct: 1192 DEEDVQAAQVARKESALEQTEFSETSTPQAMLTKDSTPLSSDSATPGFERDSTEEQSNTN 1251
Query: 1077 KMDAERRKGETKPRLVE-IKELPDWMV 1102
MD +R E + L E + + ++M+
Sbjct: 1252 DMDEDR--SELEEDLDETVGHIDEYMI 1276
Score = 41 (19.5 bits), Expect = 6.0e-30, Sum P(3) = 6.0e-30
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 144 IEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRI---LPKFKETKHRVLMFCQMTQLMTI 200
IEE + NTV ++R + LL R+ + K K+ +++CQ+++
Sbjct: 651 IEEGQDMNPEAMNTVAK---LHRVLRPY-LLRRLKTEVEKQMPAKYEHVVYCQLSKRQRF 706
Query: 201 LEDYFIWR 208
L D FI R
Sbjct: 707 LYDDFINR 714
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 957 (341.9 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 211/509 (41%), Positives = 306/509 (60%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
+K+ + + +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L+ + +
Sbjct: 447 QKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLR 506
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
+ GP+L+I PLST++NW EF W N + Y GS ++R+ +Q G
Sbjct: 507 GIH-GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPL 564
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+ KF+V++TT+E I+ D L KI W C+IIDE HR+KN +CKL + L H+V
Sbjct: 565 SGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA-LEHKV 623
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LLNFL PS F S + F + F +L EE + ++
Sbjct: 624 LLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KK 670
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGK 818
L +L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + LT G+ +
Sbjct: 671 LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHN 730
Query: 819 TGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGK 873
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK
Sbjct: 731 MPN-----LINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-DAPDFQLQAMIQAAGK 784
Query: 874 FELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRK 933
L+D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +
Sbjct: 785 LVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDR 844
Query: 934 FNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRV 993
F +P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 845 FCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV 904
Query: 994 LRLITVNSVEERILAAARYKLNMDEKVIQ 1022
RLIT NS E + A KL +D+ V+Q
Sbjct: 905 YRLITRNSYEREMFDKASLKLGLDKAVLQ 933
Score = 598 (215.6 bits), Expect = 1.0e-52, Sum P(2) = 1.0e-52
Identities = 140/341 (41%), Positives = 201/341 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL PS F S + F + F +L EE + ++L +
Sbjct: 628 TPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 674
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGEG 119
L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + LT G+ +
Sbjct: 675 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPN- 733
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELL 174
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK L+
Sbjct: 734 ----LINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-DAPDFQLQAMIQAAGKLVLI 788
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F +P
Sbjct: 789 DKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKP 848
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLI
Sbjct: 849 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI 908
Query: 295 TVNSVEERILAAARYKLNMDE---KEYHRNN-TARTQKLNK 331
T NS E + A KL +D+ ++ +R T Q+L+K
Sbjct: 909 TRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSK 949
Score = 48 (22.0 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFL--LRRLKKEVESQLPEKV-EYIIKCDMSGLQKLLY 97
+ ++ E E++ ++ + V RP ++L+K E + ++ EY + G+ LL+
Sbjct: 419 DPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREY----QLEGMNWLLF 474
Query: 98 QHLHNRGILLTDGSEKGKT 116
+ + +L D GKT
Sbjct: 475 NWYNRKNCILADEMGLGKT 493
Score = 44 (20.5 bits), Expect = 1.0e-52, Sum P(2) = 1.0e-52
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 967 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE--ERILAAARYKLNMDEK 1019
DSD P + + D+A R + RV + + + + IL R+K +++EK
Sbjct: 1074 DSDERPTRSRRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEK 1128
Score = 41 (19.5 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1069 EDELTLFQKMDAERRKGETKPRLVEIK 1095
EDEL F ++D++ + T+ R + K
Sbjct: 1062 EDELMEFSELDSDSDERPTRSRRLNDK 1088
Score = 39 (18.8 bits), Expect = 2.4e-96, Sum P(3) = 2.4e-96
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE 222
LE +++ +R+FSYL T E
Sbjct: 315 LELFYVKYRNFSYLHCKWATMEE 337
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 957 (341.9 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 211/509 (41%), Positives = 306/509 (60%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
+K+ + + +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L+ + +
Sbjct: 447 QKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLR 506
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
+ GP+L+I PLST++NW EF W N + Y GS ++R+ +Q G
Sbjct: 507 GIH-GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPL 564
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+ KF+V++TT+E I+ D L KI W C+IIDE HR+KN +CKL + L H+V
Sbjct: 565 SGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA-LEHKV 623
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LLNFL PS F S + F + F +L EE + ++
Sbjct: 624 LLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KK 670
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGK 818
L +L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + LT G+ +
Sbjct: 671 LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHN 730
Query: 819 TGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGK 873
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK
Sbjct: 731 MPN-----LINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-DAPDFQLQAMIQAAGK 784
Query: 874 FELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRK 933
L+D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +
Sbjct: 785 LVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDR 844
Query: 934 FNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRV 993
F +P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 845 FCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV 904
Query: 994 LRLITVNSVEERILAAARYKLNMDEKVIQ 1022
RLIT NS E + A KL +D+ V+Q
Sbjct: 905 YRLITRNSYEREMFDKASLKLGLDKAVLQ 933
Score = 599 (215.9 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 140/341 (41%), Positives = 202/341 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL PS F S + F + F +L EE + ++L +
Sbjct: 628 TPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 674
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGEG 119
L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + LT G+ +
Sbjct: 675 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPN- 733
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELL 174
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK L+
Sbjct: 734 ----LINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-DAPDFQLQAMIQAAGKLVLI 788
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F +P
Sbjct: 789 DKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKP 848
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLI
Sbjct: 849 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI 908
Query: 295 TVNSVEERILAAARYKLNMDE---KEYHRN-NTARTQKLNK 331
T NS E + A KL +D+ ++ +R +T Q+L+K
Sbjct: 909 TRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSK 949
Score = 48 (22.0 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFL--LRRLKKEVESQLPEKV-EYIIKCDMSGLQKLLY 97
+ ++ E E++ ++ + V RP ++L+K E + ++ EY + G+ LL+
Sbjct: 419 DPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREY----QLEGMNWLLF 474
Query: 98 QHLHNRGILLTDGSEKGKT 116
+ + +L D GKT
Sbjct: 475 NWYNRKNCILADEMGLGKT 493
Score = 41 (19.5 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1069 EDELTLFQKMDAERRKGETKPRLVEIK 1095
EDEL F ++D++ + T+ R + K
Sbjct: 1062 EDELMEFSELDSDSDERPTRSRRLNDK 1088
Score = 39 (18.8 bits), Expect = 2.4e-96, Sum P(3) = 2.4e-96
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE 222
LE +++ +R+FSYL T E
Sbjct: 315 LELFYVKYRNFSYLHCKWATMEE 337
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 957 (341.9 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 211/509 (41%), Positives = 306/509 (60%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
+K+ + + +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L+ + +
Sbjct: 447 QKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLR 506
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
+ GP+L+I PLST++NW EF W N + Y GS ++R+ +Q G
Sbjct: 507 GIH-GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPL 564
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+ KF+V++TT+E I+ D L KI W C+IIDE HR+KN +CKL + L H+V
Sbjct: 565 SGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA-LEHKV 623
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LLNFL PS F S + F + F +L EE + ++
Sbjct: 624 LLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KK 670
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGK 818
L +L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + LT G+ +
Sbjct: 671 LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHN 730
Query: 819 TGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGK 873
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK
Sbjct: 731 MPN-----LINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-DAPDFQLQAMIQAAGK 784
Query: 874 FELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRK 933
L+D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +
Sbjct: 785 LVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDR 844
Query: 934 FNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRV 993
F +P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 845 FCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV 904
Query: 994 LRLITVNSVEERILAAARYKLNMDEKVIQ 1022
RLIT NS E + A KL +D+ V+Q
Sbjct: 905 YRLITRNSYEREMFDKASLKLGLDKAVLQ 933
Score = 599 (215.9 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 140/341 (41%), Positives = 202/341 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL PS F S + F + F +L EE + ++L +
Sbjct: 628 TPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 674
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGEG 119
L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + LT G+ +
Sbjct: 675 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPN- 733
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELL 174
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK L+
Sbjct: 734 ----LINTMMELRKCCNHPYLINGAEEKILEDFRKTHSP-DAPDFQLQAMIQAAGKLVLI 788
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F +P
Sbjct: 789 DKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKP 848
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLI
Sbjct: 849 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI 908
Query: 295 TVNSVEERILAAARYKLNMDE---KEYHRN-NTARTQKLNK 331
T NS E + A KL +D+ ++ +R +T Q+L+K
Sbjct: 909 TRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSK 949
Score = 48 (22.0 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFL--LRRLKKEVESQLPEKV-EYIIKCDMSGLQKLLY 97
+ ++ E E++ ++ + V RP ++L+K E + ++ EY + G+ LL+
Sbjct: 419 DPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREY----QLEGMNWLLF 474
Query: 98 QHLHNRGILLTDGSEKGKT 116
+ + +L D GKT
Sbjct: 475 NWYNRKNCILADEMGLGKT 493
Score = 41 (19.5 bits), Expect = 2.7e-97, Sum P(3) = 2.7e-97
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1069 EDELTLFQKMDAERRKGETKPRLVEIK 1095
EDEL F ++D++ + T+ R + K
Sbjct: 1062 EDELMEFSELDSDSDERPTRSRRLNDK 1088
Score = 39 (18.8 bits), Expect = 2.4e-96, Sum P(3) = 2.4e-96
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE 222
LE +++ +R+FSYL T E
Sbjct: 315 LELFYVKYRNFSYLHCKWATMEE 337
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 955 (341.2 bits), Expect = 3.9e-97, Sum P(3) = 3.9e-97
Identities = 212/495 (42%), Positives = 301/495 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IA L + + GP+LVI PL
Sbjct: 427 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAPL 485
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLLTTY 652
ST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+TT+
Sbjct: 486 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 544
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
E I+ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN + E
Sbjct: 545 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEE 603
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 604 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 650
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
K++VE L K E II+ +++ +QK Y+ + + KG G L NT++
Sbjct: 651 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTNMPNLLNTMM 706
Query: 833 QLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDRILPKFKETK 888
+LRK CNHP++ EEK + ++ + R++GK L+D++LPK K
Sbjct: 707 ELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGG 766
Query: 889 HRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLST 948
H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FLL T
Sbjct: 767 HKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT 826
Query: 949 RAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILA 1008
RAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT NS E +
Sbjct: 827 RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFD 886
Query: 1009 AARYKLNMDEKVIQA 1023
A KL +D+ V+Q+
Sbjct: 887 KASLKLGLDKAVLQS 901
Score = 594 (214.2 bits), Expect = 4.1e-54, Sum P(2) = 4.1e-54
Identities = 135/319 (42%), Positives = 189/319 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S S F + F +L EE + ++L +
Sbjct: 595 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAI 641
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G
Sbjct: 642 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTN 697
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDR 176
L NT+++LRK CNHP++ EEK + ++ + R++GK L+D+
Sbjct: 698 MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK 757
Query: 177 ILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPES 236
+LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S
Sbjct: 758 LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS 817
Query: 237 KYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITV 296
F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 818 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR 877
Query: 297 NSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 878 NSYEREMFDKASLKLGLDK 896
Score = 59 (25.8 bits), Expect = 4.1e-54, Sum P(2) = 4.1e-54
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V L GEDAP +++ WL HP
Sbjct: 1932 RIPVINKVDGTLLVGEDAPRRAELEMWLQGHP 1963
Score = 42 (19.8 bits), Expect = 3.9e-97, Sum P(3) = 3.9e-97
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1062 NQLIARTEDELTLFQKMDAERRKGETKPRLVEIK 1095
N L E + + K+D GE PR E++
Sbjct: 1923 NHLDVDLETRIPVINKVDGTLLVGEDAPRRAELE 1956
Score = 42 (19.8 bits), Expect = 3.9e-97, Sum P(3) = 3.9e-97
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 30 QWFNAPFA-TTGEKVELNEEETILIIRRL---H----KVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E E +E I +R+ H +V RP K E+ + +
Sbjct: 367 KWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN 426
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + + G+ LL+ + + +L D GKT
Sbjct: 427 Q-LREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 460
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 686 (246.5 bits), Expect = 5.6e-97, Sum P(4) = 5.6e-97
Identities = 139/313 (44%), Positives = 198/313 (63%)
Query: 534 VTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKK 593
V + ++ L+EYQ GL+W+VSLY NLNGILADEMGLGKT+ TI+L+ YL +K
Sbjct: 769 VRTKVPFLLKFPLREYQHIGLDWLVSLYEKNLNGILADEMGLGKTIMTISLIAYLAVQKG 828
Query: 594 NLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRA-LQGRMKNSKFNVLLTTY 652
GP+L++VP S L NW +EF++W P + Y G+ R+A +G K++ F+V +T+Y
Sbjct: 829 VWGPHLIVVPSSVLFNWEMEFKRWCPGLKIFTYHGTSRDRKANRKGWSKSNAFHVCITSY 888
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
++ D + + +W MI+DE H +KN + Q + F N+ R+LLTGTPLQN L E
Sbjct: 889 SMVMSDHLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHF-NTERRLLLTGTPLQNNLME 947
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
LW+L++FL+P IF+S F+ WF+ P TG +E ++ II RLH VLRPFLLRRL
Sbjct: 948 LWSLMHFLMPDIFQSHREFQDWFSNP--VTG-MIEGGDDVNEDIINRLHAVLRPFLLRRL 1004
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
KK+VE Q+P K +I+ C MS QK LY+ N S + G ++ N ++
Sbjct: 1005 KKDVEKQMPPKHTHIVPCSMSRRQKFLYEEFIN------SSSTQSTLSSGSFFSIINILM 1058
Query: 833 QLRKLCNHPFMFQ 845
QLRK+CNHP +F+
Sbjct: 1059 QLRKVCNHPDLFE 1071
Score = 392 (143.0 bits), Expect = 5.6e-97, Sum P(4) = 5.6e-97
Identities = 77/155 (49%), Positives = 105/155 (67%)
Query: 872 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 931
GK + L +L + K+ HR L+F QMT+++ I E + ++YLRLDG+TK + R L
Sbjct: 1379 GKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLDGSTKIDKRQVLT 1438
Query: 932 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 991
+FN + K F+F+LSTR+GGLGLNL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 1439 ERFNT-DPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQDRCHRIGQTREV 1497
Query: 992 RVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
+ R IT +++EE IL + K +D+ VI+AG F
Sbjct: 1498 NIYRFITQHTIEENILKKSNQKRQLDKMVIKAGEF 1532
Score = 370 (135.3 bits), Expect = 6.0e-54, Sum P(3) = 6.0e-54
Identities = 72/147 (48%), Positives = 99/147 (67%)
Query: 169 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 228
GK + L +L + K+ HR L+F QMT+++ I E + ++YLRLDG+TK + R L
Sbjct: 1379 GKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLDGSTKIDKRQVLT 1438
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
+FN + K F+F+LSTR+GGLGLNL ADTVI +D+DWNP D QAQDR HRIGQ EV
Sbjct: 1439 ERFNT-DPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQDRCHRIGQTREV 1497
Query: 289 RVLRLITVNSVEERILAAARYKLNMDE 315
+ R IT +++EE IL + K +D+
Sbjct: 1498 NIYRFITQHTIEENILKKSNQKRQLDK 1524
Score = 310 (114.2 bits), Expect = 5.9e-55, Sum P(4) = 5.9e-55
Identities = 66/142 (46%), Positives = 89/142 (62%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P IF+S F+ WF+ P TG +E ++ II RLH V
Sbjct: 939 TPLQNNLMELWSLMHFLMPDIFQSHREFQDWFSNP--VTG-MIEGGDDVNEDIINRLHAV 995
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRRLKK+VE Q+P K +I+ C MS QK LY+ N S + G
Sbjct: 996 LRPFLLRRLKKDVEKQMPPKHTHIVPCSMSRRQKFLYEEFIN------SSSTQSTLSSGS 1049
Query: 121 ARALKNTIVQLRKLCNHPFMFQ 142
++ N ++QLRK+CNHP +F+
Sbjct: 1050 FFSIINILMQLRKVCNHPDLFE 1071
Score = 40 (19.1 bits), Expect = 5.6e-97, Sum P(4) = 5.6e-97
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 374 KKDKRLAFLLSQTDEYISNL 393
++DK+L ++ +T+ Y SNL
Sbjct: 598 ERDKQLELIVGKTEAY-SNL 616
Score = 38 (18.4 bits), Expect = 5.6e-97, Sum P(4) = 5.6e-97
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 1140 DSLTDQEWLKAI 1151
D++T QEW A+
Sbjct: 1553 DNVTQQEWENAV 1564
Score = 38 (18.4 bits), Expect = 5.6e-97, Sum P(4) = 5.6e-97
Identities = 9/44 (20%), Positives = 25/44 (56%)
Query: 1069 EDELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVENSM 1112
E+E + D ++ K + + + E+K + + K+D++ +N++
Sbjct: 1791 ENEKEKENERDKDKDKDQDQDKDQEMKIINEIPPKNDEDEDNNI 1834
Score = 38 (18.4 bits), Expect = 5.9e-55, Sum P(4) = 5.9e-55
Identities = 8/58 (13%), Positives = 23/58 (39%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRN 321
++++N Q Q Q ++ + + + + + RY+ +D Y ++
Sbjct: 1192 NNNFNQQQQQQQQQYQYQQNNNQQQNIHSCLDIYQNQRNEFQIKRYQETLDRMRYQKS 1249
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 953 (340.5 bits), Expect = 7.4e-97, Sum P(3) = 7.4e-97
Identities = 210/508 (41%), Positives = 304/508 (59%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
+K+ + + +L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+I L+ + +
Sbjct: 446 QKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLR 505
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
+ GP+L+I PLST++NW EF W N + Y GS ++R+ +Q G
Sbjct: 506 GIH-GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPL 563
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+ KF+V++TT+E I+ D L KI W C+IIDE HR+KN +CKL + L H+V
Sbjct: 564 SGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMA-LEHKV 622
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LLNFL PS F S + F + F +L EE + ++
Sbjct: 623 LLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KK 669
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + KG
Sbjct: 670 LQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-A 725
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKF 874
+ L NT+++LRK CNHP++ EEK + + ++ PD + + +GK
Sbjct: 726 NQHNMPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSP-DAPDFQLQAMIQAAGKL 784
Query: 875 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 934
L+D++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F
Sbjct: 785 VLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRF 844
Query: 935 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 994
+P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V
Sbjct: 845 CKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVY 904
Query: 995 RLITVNSVEERILAAARYKLNMDEKVIQ 1022
RLIT NS E + A KL +D+ V+Q
Sbjct: 905 RLITRNSYEREMFDKASLKLGLDKAVLQ 932
Score = 595 (214.5 bits), Expect = 4.7e-52, Sum P(2) = 4.7e-52
Identities = 139/340 (40%), Positives = 200/340 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL PS F S + F + F +L EE + ++L +
Sbjct: 627 TPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG----------DLKTEEQV---KKLQSI 673
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK +VE L K E II+ +++ +QK Y+ + + KG +
Sbjct: 674 LKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-ANQHN 729
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD-----IYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + + ++ PD + + +GK L+D
Sbjct: 730 MPNLINTMMELRKCCNHPYLISGAEEKILEDFRKTHSP-DAPDFQLQAMIQAAGKLVLID 788
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK H+VL+F QM + + ILEDY I R ++Y R+DG + R + +F +P+
Sbjct: 789 KLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPD 848
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 849 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 908
Query: 296 VNSVEERILAAARYKLNMDE---KEYHRN-NTARTQKLNK 331
NS E + A KL +D+ ++ +R +T Q+L+K
Sbjct: 909 RNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSK 948
Score = 48 (22.0 bits), Expect = 7.4e-97, Sum P(3) = 7.4e-97
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFL--LRRLKKEVESQLPEKV-EYIIKCDMSGLQKLLY 97
+ ++ E E++ ++ + V RP ++L+K E + ++ EY + G+ LL+
Sbjct: 418 DPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREY----QLEGMNWLLF 473
Query: 98 QHLHNRGILLTDGSEKGKT 116
+ + +L D GKT
Sbjct: 474 NWYNRKNCILADEMGLGKT 492
Score = 41 (19.5 bits), Expect = 7.4e-97, Sum P(3) = 7.4e-97
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1069 EDELTLFQKMDAERRKGETKPRLVEIK 1095
EDEL F ++D++ + T+ R + K
Sbjct: 1061 EDELMEFSELDSDSDERPTRSRRLNDK 1087
Score = 39 (18.8 bits), Expect = 6.5e-96, Sum P(3) = 6.5e-96
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE 222
LE +++ +R+FSYL T E
Sbjct: 314 LELFYVKYRNFSYLHCKWATMEE 336
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 691 (248.3 bits), Expect = 7.4e-97, Sum P(3) = 7.4e-97
Identities = 143/344 (41%), Positives = 220/344 (63%)
Query: 504 VGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLY 561
+G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+V++Y
Sbjct: 578 LGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWLVTMY 633
Query: 562 NNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSA 621
LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W PS
Sbjct: 634 EKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSF 693
Query: 622 NVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKN 680
++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE +KN
Sbjct: 694 KILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKN 753
Query: 681 HHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFA 740
+ Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+ P
Sbjct: 754 FKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL- 811
Query: 741 TTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLY 800
TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY
Sbjct: 812 -TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLY 869
Query: 801 QHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ + K G ++ N ++QLRK+CNHP +F
Sbjct: 870 DDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 907
Score = 377 (137.8 bits), Expect = 7.4e-97, Sum P(3) = 7.4e-97
Identities = 73/155 (47%), Positives = 102/155 (65%)
Query: 872 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 931
GK + L +L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R L+
Sbjct: 2043 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2102
Query: 932 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 991
+FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 2103 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Query: 992 RVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
+ RLI+ +VEE IL A K + + I+ G F
Sbjct: 2162 HIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 2196
Score = 363 (132.8 bits), Expect = 5.1e-54, Sum P(2) = 5.1e-54
Identities = 70/142 (49%), Positives = 96/142 (67%)
Query: 169 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 228
GK + L +L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R L+
Sbjct: 2043 GKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALM 2102
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
+FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 2103 ERFNA-DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 2161
Query: 289 RVLRLITVNSVEERILAAARYK 310
+ RLI+ +VEE IL A K
Sbjct: 2162 HIYRLISERTVEENILKKANQK 2183
Score = 301 (111.0 bits), Expect = 5.1e-54, Sum P(2) = 5.1e-54
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 776 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 832
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 833 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 886
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 887 FMSVINILMQLRKVCNHPNLF 907
Score = 40 (19.1 bits), Expect = 7.4e-97, Sum P(3) = 7.4e-97
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 230 DLHLDFIVGQTEKYSDLLSQ 249
Score = 40 (19.1 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 506 EKKTEDDEYKDAGEEATYYSIAHTYH-EKVTEQASIMVNGKLKEY 549
E++ ED+E A EE + H ++ + + + L++Y
Sbjct: 407 EEEAEDEEDTIAAEEQLEGEVDHAMELSELAREGELSMEELLQQY 451
Score = 38 (18.4 bits), Expect = 1.1e-53, Sum P(3) = 1.1e-53
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 688 TLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSI 724
T T+ ++HR +L ++L E+ F++P +
Sbjct: 1947 TFWTYTEAAHRAVLFPQQRLDQLSEIIERFIFVMPPV 1983
Score = 37 (18.1 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 506 EKKTEDDEYKDAGEEATYYSIAHTYHE-KVTEQASIMVNGKLKEYQIK-GLEWMVS 559
E ++ED+E + + EE T S A E + +E A +E G+E++++
Sbjct: 501 EDRSEDEEDEHSEEEETSGSSASEESESEESEDAQSQSQADEEEEDDDFGVEYLLA 556
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 656 (236.0 bits), Expect = 7.7e-97, Sum P(3) = 7.7e-97
Identities = 131/322 (40%), Positives = 207/322 (64%)
Query: 536 EQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
+Q +I+ N LK YQ+KG+ W+V+LY+ +NGILADEMGLGKT+Q+IA+L +L E+K
Sbjct: 1153 KQPTIL-NADLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSIAVLAHLAEEKNIW 1211
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRM-------KNSKFNVL 648
GP+L++ P STL NW EF K+ P+ V+ Y G+ R ++ +NS F+VL
Sbjct: 1212 GPFLIVTPKSTLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKYWNPKKLYHRNSPFHVL 1271
Query: 649 LTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQN 708
+T+Y I++D+ +++W+ M++DE H +K+ +TL +F N +R+LLTGTP+QN
Sbjct: 1272 ITSYNVIVRDEKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSF-NCRNRLLLTGTPIQN 1330
Query: 709 KLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG-EKVELNEEETILIIRRLHKVLRPF 767
+ ELWALL+F++P+ F S F +WF+ + LNE + + RLH +L+PF
Sbjct: 1331 SMAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQ----LNRLHMILKPF 1386
Query: 768 LLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA-RA 826
+LRR+K++VE+++P K E + C+++ QK LYQ + + I +T+ E G+ +A
Sbjct: 1387 MLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRSN-ISITELLGGASFSEQGSMKA 1445
Query: 827 LKNTIVQLRKLCNHPFMFQNIE 848
L N ++Q RK+CNHP F+ E
Sbjct: 1446 LMNFVMQFRKVCNHPETFKRSE 1467
Score = 406 (148.0 bits), Expect = 7.7e-97, Sum P(3) = 7.7e-97
Identities = 81/157 (51%), Positives = 110/157 (70%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK ++LD++L K HRVL++ Q T+++ ILED+ I+R + YLRLDG++K +DR ++
Sbjct: 1766 SGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRDM 1825
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F S F FLLSTRA G+G+NL +ADTVI +DSDWNP D QAQDRAHR+GQ
Sbjct: 1826 VDDFQSDPS-IFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRP 1884
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFD 1027
V V RLIT N++EE+IL A+ K + VI G F+
Sbjct: 1885 VTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKFE 1921
Score = 391 (142.7 bits), Expect = 2.2e-55, Sum P(2) = 2.2e-55
Identities = 77/143 (53%), Positives = 104/143 (72%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK ++LD++L K HRVL++ Q T+++ ILED+ I+R + YLRLDG++K +DR ++
Sbjct: 1766 SGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRDM 1825
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F S F FLLSTRA G+G+NL +ADTVI +DSDWNP D QAQDRAHR+GQ
Sbjct: 1826 VDDFQSDPS-IFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRP 1884
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLIT N++EE+IL A+ K
Sbjct: 1885 VTVYRLITKNTIEEKILKRAKQK 1907
Score = 281 (104.0 bits), Expect = 5.2e-57, Sum P(2) = 5.2e-57
Identities = 57/147 (38%), Positives = 91/147 (61%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG-EKVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P+ F S F +WF+ + LNE + + RLH
Sbjct: 1326 TPIQNSMAELWALLHFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQ----LNRLHM 1381
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+L+PF+LRR+K++VE+++P K E + C+++ QK LYQ + + I +T+ E
Sbjct: 1382 ILKPFMLRRIKRDVENEMPSKTEVEVYCNLTHRQKKLYQSIRSN-ISITELLGGASFSEQ 1440
Query: 120 GA-RALKNTIVQLRKLCNHPFMFQNIE 145
G+ +AL N ++Q RK+CNHP F+ E
Sbjct: 1441 GSMKALMNFVMQFRKVCNHPETFKRSE 1467
Score = 46 (21.3 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 501 SKAVGEKKTEDD-EYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMV- 558
+K + EK +DD E EE + T EK E+ + + LK+ Q K +E +
Sbjct: 1038 NKKIKEKNDQDDNESSSEEEEESSDDEGKTEQEKKEEEE--LKSEALKKTQ-KAIELQLL 1094
Query: 559 --SLYNNNLNGIL--ADEMGLGKTV-QTIALLTYLM 589
++ ++N I A E G G+T+ +++A+ +M
Sbjct: 1095 KTKTFDRDVNKIKNSATEGG-GETIPESLAVSDKMM 1129
Score = 42 (19.8 bits), Expect = 7.7e-97, Sum P(3) = 7.7e-97
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL+SQT+ Y
Sbjct: 987 KRQQRKLNFLISQTELY 1003
Score = 38 (18.4 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 655 IIKDKSVLSKIQW 667
II ++S+L K+ W
Sbjct: 865 IITNQSILEKLDW 877
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 687 (246.9 bits), Expect = 8.0e-97, Sum P(3) = 8.0e-97
Identities = 146/344 (42%), Positives = 212/344 (61%)
Query: 505 GEKKTEDDEYKDAGEEA-TYYSIAHTYHE-KVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
G +DD DA A + +T V ++ L+EYQ GL+W+V++
Sbjct: 871 GASGNKDDMLNDAAALAESLQPKGNTLSSTNVVTPVPFLLKHSLREYQHIGLDWLVTMNE 930
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
LNGILADEMGLGKT+QTIALL +L K N GP+L++VP S + NW +EF+KW P
Sbjct: 931 RKLNGILADEMGLGKTIQTIALLAHLACAKGNWGPHLIVVPSSVMLNWEMEFKKWCPGFK 990
Query: 623 VVAYKGSPLARRALQ-GRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
++ Y GS R+ + G K + F+V +T+Y+ +++D+ + +WK +I+DE +KN
Sbjct: 991 ILTYYGSQKERKLKRVGWTKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNF 1050
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
+ Q L F ++ R+LLTGTPLQN L ELW+L++FL+P +F S F++WF+ P
Sbjct: 1051 KSQRWQLLLNF-STERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPM-- 1107
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
TG +E N E +I RLHKV+RPFLLRRLKKEVE Q+P+K E++I C +S Q+ LY+
Sbjct: 1108 TG-MIEGNMEYNETLITRLHKVIRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYE 1166
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQ 845
+R E +TG ++ N ++QLRK+CNHP MF+
Sbjct: 1167 DFMSRA----KTRETLQTGN--LLSVINVLMQLRKVCNHPNMFE 1204
Score = 378 (138.1 bits), Expect = 8.0e-97, Sum P(3) = 8.0e-97
Identities = 72/155 (46%), Positives = 103/155 (66%)
Query: 872 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 931
GK + +DR+L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R L+
Sbjct: 1658 GKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILM 1717
Query: 932 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 991
+FN + + F F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1718 ERFNG-DKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDV 1776
Query: 992 RVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
+ RL++ ++E IL A K + + I+ G F
Sbjct: 1777 HIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNF 1811
Score = 366 (133.9 bits), Expect = 2.7e-54, Sum P(3) = 2.7e-54
Identities = 71/158 (44%), Positives = 101/158 (63%)
Query: 169 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 228
GK + +DR+L + K HRVL+F QMT+++ +LE + + YLRLDG+T+ E R L+
Sbjct: 1658 GKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILM 1717
Query: 229 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 288
+FN + + F F+LSTR+GG+G+NL ADTVI +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1718 ERFNG-DKRIFCFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDV 1776
Query: 289 RVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTART 326
+ RL++ ++E IL A K + + N T
Sbjct: 1777 HIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTT 1814
Score = 319 (117.4 bits), Expect = 2.5e-56, Sum P(3) = 2.5e-56
Identities = 68/142 (47%), Positives = 94/142 (66%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F S F++WF+ P TG +E N E +I RLHKV
Sbjct: 1072 TPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPM--TG-MIEGNMEYNETLITRLHKV 1128
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
+RPFLLRRLKKEVE Q+P+K E++I C +S Q+ LY+ +R E +TG
Sbjct: 1129 IRPFLLRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRA----KTRETLQTGN-- 1182
Query: 121 ARALKNTIVQLRKLCNHPFMFQ 142
++ N ++QLRK+CNHP MF+
Sbjct: 1183 LLSVINVLMQLRKVCNHPNMFE 1204
Score = 44 (20.5 bits), Expect = 2.5e-56, Sum P(3) = 2.5e-56
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 361 AEDEEGYRKLIDQKKDKRLAFL 382
AED ++LI +K++RLA L
Sbjct: 1489 AEDPYKVQELIQMRKEQRLAAL 1510
Score = 43 (20.2 bits), Expect = 8.0e-97, Sum P(3) = 8.0e-97
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 373 QKKDKRLAFLLSQTDEYISNLTQ 395
Q D+ L+F++ QT+++ L +
Sbjct: 610 QALDQHLSFIVDQTEKFSQQLVE 632
Score = 37 (18.1 bits), Expect = 4.8e-61, Sum P(3) = 4.8e-61
Identities = 9/50 (18%), Positives = 22/50 (44%)
Query: 979 QDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQ 1028
QD + + +N+ R++ T++ ++ + L E + A +Q
Sbjct: 1832 QDESSQEKSENKDRIVATTTLSDTPSTVVETEKQSLRAFEHALAAAEDEQ 1881
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 955 (341.2 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 212/495 (42%), Positives = 301/495 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IA L + + GP+LVI PL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAPL 868
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLLTTY 652
ST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+TT+
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
E I+ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN + E
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEE 986
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1033
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
K++VE L K E II+ +++ +QK Y+ + + KG G L NT++
Sbjct: 1034 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTNMPNLLNTMM 1089
Query: 833 QLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDRILPKFKETK 888
+LRK CNHP++ EEK + ++ + R++GK L+D++LPK K
Sbjct: 1090 ELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAGG 1149
Query: 889 HRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLST 948
H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FLL T
Sbjct: 1150 HKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT 1209
Query: 949 RAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILA 1008
RAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT NS E +
Sbjct: 1210 RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFD 1269
Query: 1009 AARYKLNMDEKVIQA 1023
A KL +D+ V+Q+
Sbjct: 1270 KASLKLGLDKAVLQS 1284
Score = 594 (214.2 bits), Expect = 6.6e-54, Sum P(2) = 6.6e-54
Identities = 135/319 (42%), Positives = 189/319 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S S F + F +L EE + ++L +
Sbjct: 978 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAI 1024
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G
Sbjct: 1025 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTN 1080
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDR 176
L NT+++LRK CNHP++ EEK + ++ + R++GK L+D+
Sbjct: 1081 MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK 1140
Query: 177 ILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPES 236
+LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S
Sbjct: 1141 LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS 1200
Query: 237 KYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITV 296
F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 1201 DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR 1260
Query: 297 NSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1261 NSYEREMFDKASLKLGLDK 1279
Score = 59 (25.8 bits), Expect = 6.6e-54, Sum P(2) = 6.6e-54
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V L GEDAP +++ WL HP
Sbjct: 2314 RIPVINKVDGTLLVGEDAPRRAELEMWLQGHP 2345
Score = 42 (19.8 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1062 NQLIARTEDELTLFQKMDAERRKGETKPRLVEIK 1095
N L E + + K+D GE PR E++
Sbjct: 2305 NHLDVDLETRIPVINKVDGTLLVGEDAPRRAELE 2338
Score = 42 (19.8 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 30 QWFNAPFA-TTGEKVELNEEETILIIRRL---H----KVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E E +E I +R+ H +V RP K E+ + +
Sbjct: 750 KWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN 809
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + + G+ LL+ + + +L D GKT
Sbjct: 810 Q-LREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 843
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 965 (344.8 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
Identities = 218/519 (42%), Positives = 312/519 (60%)
Query: 533 KVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K E + NG +L+EYQ++GL W++ + N N ILADEMGLGKT+Q+I L Y +
Sbjct: 843 KKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL-YEILL 901
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
GP+L+I PLST++NW EF W NVV Y GS ++R+ +Q GR+
Sbjct: 902 SGIRGPFLIIAPLSTITNWEREFRTWT-DLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV 960
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
+F ++TT+E I+ L+ I+W+C+IIDE HR+KN +CKL + L N H+V
Sbjct: 961 RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNRNCKLLEGLKLM-NLEHKV 1019
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LLTGTPLQN + EL++LL+FL P F + STF Q F +L EE + ++
Sbjct: 1020 LLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFG----------DLKTEEQV---QK 1066
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 819
L +L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG
Sbjct: 1067 LQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KG-A 1122
Query: 820 GEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKF 874
G+ L NT+++LRK CNHP++ + EEK + + PD + +++GK
Sbjct: 1123 GQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPTA-PDFHLQAMIQSAGKL 1181
Query: 875 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 934
L+D++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F
Sbjct: 1182 VLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRF 1241
Query: 935 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQ-AQDRAHRIGQKNEVRV 993
++P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQ AQ R HRIGQ V+V
Sbjct: 1242 SKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCHRIGQNKAVKV 1301
Query: 994 LRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTG 1032
RLIT NS E + A KL +D+ V+Q+ + S G
Sbjct: 1302 YRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVG 1340
Score = 596 (214.9 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 135/321 (42%), Positives = 193/321 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P F + STF Q F +L EE + ++L +
Sbjct: 1024 TPLQNTVEELFSLLHFLEPLRFPAESTFMQEFG----------DLKTEEQV---QKLQAI 1070
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1071 LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLS---KG-AGQAN 1126
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLD 175
L NT+++LRK CNHP++ + EEK + + PD + +++GK L+D
Sbjct: 1127 VPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPTA-PDFHLQAMIQSAGKLVLID 1185
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K H+VL+F QM + + ILEDY I + + Y R+DG + R + +F++P+
Sbjct: 1186 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPD 1245
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQ-AQDRAHRIGQKNEVRVLRLI 294
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQ AQ R HRIGQ V+V RLI
Sbjct: 1246 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCHRIGQNKAVKVYRLI 1305
Query: 295 TVNSVEERILAAARYKLNMDE 315
T NS E + A KL +D+
Sbjct: 1306 TRNSYEREMFDRASLKLGLDK 1326
Score = 74 (31.1 bits), Expect = 1.1e-55, Sum P(2) = 1.1e-55
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V +L G+DAP K ++ WL HPG+
Sbjct: 2487 VPVINLKDGTRLAGDDAPKRKDLERWLKEHPGY 2519
Score = 44 (20.5 bits), Expect = 1.6e-96, Sum P(2) = 1.6e-96
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 513 EYKDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
E KD GE YY + + Y + E + K++E++
Sbjct: 782 EDKDTGEPVVYYLVKWCSLPYEDSTWELKEDVDQAKIEEFE 822
Score = 43 (20.2 bits), Expect = 2.1e-96, Sum P(2) = 2.1e-96
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 89 MSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ GL LL+ + R +L D GKT
Sbjct: 862 LEGLNWLLFNWYNRRNCILADEMGLGKT 889
Score = 42 (19.8 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ + + K+ G APP K + +L +P
Sbjct: 2560 RVQLINRRNARKVGGAFAPPLKDLCRFLKENP 2591
Score = 41 (19.5 bits), Expect = 3.2e-52, Sum P(2) = 3.2e-52
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 759 RLHKVLRPFLLRRLK----KEVESQLPEKVEYIIKCDMS 793
R+ K RPF + + EVES+ EK + CD S
Sbjct: 1447 RIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRS 1485
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 957 (341.9 bits), Expect = 1.8e-96, Sum P(3) = 1.8e-96
Identities = 213/496 (42%), Positives = 302/496 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IA L + + GP+LVI PL
Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAPL 870
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLLTTY 652
ST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+TT+
Sbjct: 871 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 929
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
E I+ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN + E
Sbjct: 930 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEE 988
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 989 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1035
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
K++VE L K E II+ +++ +QK Y+ + + KG G L NT++
Sbjct: 1036 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTNMPNLLNTMM 1091
Query: 833 QLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLDRILPKFKET 887
+LRK CNHP++ EEK + ++ D + R++GK L+D++LPK K
Sbjct: 1092 ELRKCCNHPYLINGAEEKILMEFREACHIIP-QDFHLQAMVRSAGKLVLIDKLLPKLKAG 1150
Query: 888 KHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLS 947
H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FLL
Sbjct: 1151 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1210
Query: 948 TRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT NS E +
Sbjct: 1211 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1270
Query: 1008 AAARYKLNMDEKVIQA 1023
A KL +D+ V+Q+
Sbjct: 1271 DKASLKLGLDKAVLQS 1286
Score = 596 (214.9 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 136/320 (42%), Positives = 190/320 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S S F + F +L EE + ++L +
Sbjct: 980 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAI 1026
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G
Sbjct: 1027 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTN 1082
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLD 175
L NT+++LRK CNHP++ EEK + ++ D + R++GK L+D
Sbjct: 1083 MPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIP-QDFHLQAMVRSAGKLVLID 1141
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1142 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1201
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 1202 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1261
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1262 RNSYEREMFDKASLKLGLDK 1281
Score = 52 (23.4 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V L G++AP +++ WL HP
Sbjct: 2316 RIPVINKVDGTLLVGDEAPRRAELEMWLQGHP 2347
Score = 42 (19.8 bits), Expect = 1.8e-96, Sum P(3) = 1.8e-96
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 30 QWFNAPFA-TTGEKVELNEEETILIIRR-------LHKVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E E +E I +R L +V RP K E+ + +
Sbjct: 752 KWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELRRVNRPQANAWKKLELSHEYKNRN 811
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + + G+ LL+ + + +L D GKT
Sbjct: 812 Q-LREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 845
Score = 38 (18.4 bits), Expect = 1.8e-96, Sum P(3) = 1.8e-96
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 1062 NQLIARTEDELTLFQKMDAERRKGETKPRLVEIK 1095
N L E + + K+D G+ PR E++
Sbjct: 2307 NHLDLDLETRIPVINKVDGTLLVGDEAPRRAELE 2340
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 957 (341.9 bits), Expect = 2.3e-96, Sum P(3) = 2.3e-96
Identities = 213/496 (42%), Positives = 302/496 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IA L + + GP+LVI PL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAPL 868
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLLTTY 652
ST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+TT+
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
E I+ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN + E
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEE 986
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1033
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
K++VE L K E II+ +++ +QK Y+ + + KG G L NT++
Sbjct: 1034 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTNMPNLLNTMM 1089
Query: 833 QLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLDRILPKFKET 887
+LRK CNHP++ EEK + ++ D + R++GK L+D++LPK K
Sbjct: 1090 ELRKCCNHPYLINGAEEKILMEFREACHIIP-QDFHLQAMVRSAGKLVLIDKLLPKLKAG 1148
Query: 888 KHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLS 947
H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FLL
Sbjct: 1149 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1208
Query: 948 TRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT NS E +
Sbjct: 1209 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1268
Query: 1008 AAARYKLNMDEKVIQA 1023
A KL +D+ V+Q+
Sbjct: 1269 DKASLKLGLDKAVLQS 1284
Score = 596 (214.9 bits), Expect = 3.5e-53, Sum P(2) = 3.5e-53
Identities = 136/320 (42%), Positives = 190/320 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S S F + F +L EE + ++L +
Sbjct: 978 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAI 1024
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G
Sbjct: 1025 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTN 1080
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLD 175
L NT+++LRK CNHP++ EEK + ++ D + R++GK L+D
Sbjct: 1081 MPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIP-QDFHLQAMVRSAGKLVLID 1139
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1140 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1199
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 1200 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1259
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1260 RNSYEREMFDKASLKLGLDK 1279
Score = 50 (22.7 bits), Expect = 3.5e-53, Sum P(2) = 3.5e-53
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V L G++AP ++ WL HP
Sbjct: 2314 RIPVINKVDGTLLVGDEAPRRAELDMWLQGHP 2345
Score = 41 (19.5 bits), Expect = 2.3e-96, Sum P(3) = 2.3e-96
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 30 QWFNAPFA-TTGEKVELNEEETILIIRRL---H----KVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E E +E I +R+ H +V RP K E+ + +
Sbjct: 750 KWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQANAWKKLELSHEYKNRN 809
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + + G+ LL+ + + +L D GKT
Sbjct: 810 Q-LREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 843
Score = 38 (18.4 bits), Expect = 2.3e-96, Sum P(3) = 2.3e-96
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1062 NQLIARTEDELTLFQKMDAERRKGETKPRLVEI 1094
N L E + + K+D G+ PR E+
Sbjct: 2305 NHLDVDLETRIPVINKVDGTLLVGDEAPRRAEL 2337
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 652 (234.6 bits), Expect = 2.9e-96, Sum P(4) = 2.9e-96
Identities = 136/339 (40%), Positives = 213/339 (62%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NGKLK YQ+KG+ W+ +LY +NGILADEMGLGKTVQ+IALL +L E++ GP+L+I
Sbjct: 520 NGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIIS 579
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL-----QGRM--KNSKFNVLLTTYEFI 655
P STL+NW EF ++ P V+ Y G+P R+ + Q + +++ F+V++T+Y+ +
Sbjct: 580 PASTLNNWHQEFARFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQLV 639
Query: 656 IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWA 715
++D +++W+ M++DE +K+ + L F +R+LLTGTP+QN + ELWA
Sbjct: 640 VQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQF-QCRNRLLLTGTPIQNTMAELWA 698
Query: 716 LLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVLRPFLLRRLKK 774
LL+F++P++F S F +WF+ + E K ++E + + RLH +L+PF+LRR+KK
Sbjct: 699 LLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHMILKPFMLRRIKK 754
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKTGEGGAR--ALKNT 830
+VE++L +K+E ++ C + QKLLYQ L N+ I + D S G T + +L N
Sbjct: 755 DVENELSDKIEILMYCQQTSRQKLLYQALKNK-ISIDDLLQSSMGTTQQAQTTTSSLMNL 813
Query: 831 IVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 869
++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 814 VMQFRKVCNHPELFERQETWSPFHISLKPYPIS-KFIYR 851
Score = 402 (146.6 bits), Expect = 2.9e-96, Sum P(4) = 2.9e-96
Identities = 78/156 (50%), Positives = 107/156 (68%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1108 SGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1167
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1168 VADFQN-RNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1226
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
V V RLI ++EERIL A+ K + VI G F
Sbjct: 1227 VTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNF 1262
Score = 386 (140.9 bits), Expect = 5.3e-56, Sum P(3) = 5.3e-56
Identities = 74/143 (51%), Positives = 102/143 (71%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L + K HRVL++ QMT+++ +LE+Y ++R +Y+RLDG++K +R ++
Sbjct: 1108 SGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDM 1167
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F + F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHR+GQ +
Sbjct: 1168 VADFQN-RNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQ 1226
Query: 288 VRVLRLITVNSVEERILAAARYK 310
V V RLI ++EERIL A+ K
Sbjct: 1227 VTVYRLICKGTIEERILQRAKEK 1249
Score = 300 (110.7 bits), Expect = 5.9e-59, Sum P(2) = 5.9e-59
Identities = 67/171 (39%), Positives = 103/171 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++P++F S F +WF+ + E K ++E + + RLH
Sbjct: 687 TPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQ----LSRLHM 742
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD--GSEKGKTG 117
+L+PF+LRR+KK+VE++L +K+E ++ C + QKLLYQ L N+ I + D S G T
Sbjct: 743 ILKPFMLRRIKKDVENELSDKIEILMYCQQTSRQKLLYQALKNK-ISIDDLLQSSMGTTQ 801
Query: 118 EGGAR--ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYR 166
+ +L N ++Q RK+CNHP +F+ E HI +S IYR
Sbjct: 802 QAQTTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYPIS-KFIYR 851
Score = 42 (19.8 bits), Expect = 2.9e-96, Sum P(4) = 2.9e-96
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 46 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 105
+EEE L LH +LR ++L + S+ E +Y + +GL + +
Sbjct: 151 DEEEFSLSREELHNMLRLHKYKKLHQSKYSKDKELQQY--QYYSAGLLSTYDPYYEQQRH 208
Query: 106 LLTDGSEKGKTGEGGARALKNTIVQLRK 133
LL G +K K E + LK + +++K
Sbjct: 209 LL--GPKKKKFKE--EKKLKGKLKKVKK 232
Score = 42 (19.8 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 23/88 (26%), Positives = 40/88 (45%)
Query: 749 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 808
+EEE L LH +LR ++L + S+ E +Y + +GL + +
Sbjct: 151 DEEEFSLSREELHNMLRLHKYKKLHQSKYSKDKELQQY--QYYSAGLLSTYDPYYEQQRH 208
Query: 809 LLTDGSEKGKTGEGGARALKNTIVQLRK 836
LL G +K K E + LK + +++K
Sbjct: 209 LL--GPKKKKFKE--EKKLKGKLKKVKK 232
Score = 40 (19.1 bits), Expect = 5.3e-56, Sum P(3) = 5.3e-56
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 359 LMAEDEEGYRKLIDQKKDKR 378
L+ +DEE +KL ++++KR
Sbjct: 1275 LLLDDEELEKKLRQRQEEKR 1294
Score = 39 (18.8 bits), Expect = 2.9e-96, Sum P(4) = 2.9e-96
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 373 QKKDKRLAFLLSQTDEY 389
+++ ++L FL++QT+ Y
Sbjct: 384 KRQQRKLNFLITQTELY 400
Score = 39 (18.8 bits), Expect = 9.2e-31, Sum P(3) = 9.2e-31
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 185 KHRVLMFCQMTQLMTIL 201
K +LM+CQ T +L
Sbjct: 763 KIEILMYCQQTSRQKLL 779
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 630 (226.8 bits), Expect = 8.7e-96, Sum P(2) = 8.7e-96
Identities = 122/278 (43%), Positives = 186/278 (66%)
Query: 535 TEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
T+Q + + GK+++YQ++GLEW+ SL+ N L GILADEMGLGKTVQ I+L+ + E +
Sbjct: 191 TQQPAPVTGGKMRKYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAISLIAFFKEHNVS 250
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSK------FNVL 648
GP+L+ PLST+SNWV EF +W P V Y G+ R L+ + N + F V+
Sbjct: 251 -GPFLISAPLSTVSNWVDEFARWTPGIKTVLYHGTRDERAQLRKKFMNLRDQKSPDFPVV 309
Query: 649 LTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQN 708
T+YE + D+ L++ QW+ +I+DEGHR+KN +C+L + L + YNS++R+L+TGTPLQN
Sbjct: 310 CTSYEICMNDRKFLAQYQWRYIIVDEGHRLKNMNCRLIKELLS-YNSANRLLITGTPLQN 368
Query: 709 KLPELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPF 767
+ ELW+LL+FLLP IF ++F+ WF+ + + ++ E ++ +H +L+PF
Sbjct: 369 NITELWSLLHFLLPEIFNDLNSFQNWFDFSSVLDNNGQTDMIERRKRTLVSTMHSILKPF 428
Query: 768 LLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
LLRR+K +VES LP+K EYI+ ++ QK LY+ + N
Sbjct: 429 LLRRVKTDVESALPKKREYILYAPLTLEQKDLYREILN 466
Score = 379 (138.5 bits), Expect = 8.7e-96, Sum P(2) = 8.7e-96
Identities = 91/211 (43%), Positives = 121/211 (57%)
Query: 825 RALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKF 884
+ ++N ++Q R CN P F Y +++ + SGK LLDR++P
Sbjct: 587 KKMQNPVMQARLACNSPHNF------YWPWAEDPSSI--DETLVTASGKMLLLDRLIPCL 638
Query: 885 KETKHRVLMFCQMTQLMTILEDYFIW-RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 943
H++L+F Q + IL+D+ R ++ R+DG DR ++ FN + Y I
Sbjct: 639 LNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNT-DKDYKI 697
Query: 944 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 1003
FLLSTRAGG G+NL AADTVI+FDSDWNP QDLQAQDRAHRIGQ V V RL T +VE
Sbjct: 698 FLLSTRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTVE 757
Query: 1004 ERILAAARYKLNMDEKVIQAGMFDQKSTGSE 1034
+ +L A K ++ VIQ G F KS SE
Sbjct: 758 QTLLEKADSKRRLERLVIQKGKF--KSLLSE 786
Score = 356 (130.4 bits), Expect = 7.3e-47, Sum P(2) = 7.3e-47
Identities = 82/194 (42%), Positives = 112/194 (57%)
Query: 122 RALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKF 181
+ ++N ++Q R CN P F Y +++ + SGK LLDR++P
Sbjct: 587 KKMQNPVMQARLACNSPHNF------YWPWAEDPSSI--DETLVTASGKMLLLDRLIPCL 638
Query: 182 KETKHRVLMFCQMTQLMTILEDYFIW-RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
H++L+F Q + IL+D+ R ++ R+DG DR ++ FN + Y I
Sbjct: 639 LNKGHKILIFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFNT-DKDYKI 697
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGG G+NL AADTVI+FDSDWNP QDLQAQDRAHRIGQ V V RL T +VE
Sbjct: 698 FLLSTRAGGQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTVE 757
Query: 301 ERILAAARYKLNMD 314
+ +L A K ++
Sbjct: 758 QTLLEKADSKRRLE 771
Score = 224 (83.9 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
Identities = 43/103 (41%), Positives = 67/103 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHK 59
TPLQN + ELW+LL+FLLP IF ++F+ WF+ + + ++ E ++ +H
Sbjct: 364 TPLQNNITELWSLLHFLLPEIFNDLNSFQNWFDFSSVLDNNGQTDMIERRKRTLVSTMHS 423
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 102
+L+PFLLRR+K +VES LP+K EYI+ ++ QK LY+ + N
Sbjct: 424 ILKPFLLRRVKTDVESALPKKREYILYAPLTLEQKDLYREILN 466
Score = 44 (20.5 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 1061 VNQLIARTEDELTLFQKMDAERRKGETKPRLVEIKEL--PDWMVKDD-DEVENSM 1112
V +L + E TL +K D++RR + + K L M +DD DE++ ++
Sbjct: 747 VYRLATKGTVEQTLLEKADSKRRLERLVIQKGKFKSLLSESTMSRDDVDELKRAL 801
Score = 40 (19.1 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D HR+ N + L++ NS ++ + N+ E
Sbjct: 334 DEGHRLKNMNCRLIKELLSYNSANRLLITGTPLQNNITE 372
Score = 38 (18.4 bits), Expect = 7.7e-60, Sum P(2) = 7.7e-60
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 1076 QKMDAERRKGETKPRLV 1092
Q D R G+TKP +V
Sbjct: 731 QAQDRAHRIGQTKPVIV 747
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 946 (338.1 bits), Expect = 9.1e-96, Sum P(3) = 9.1e-96
Identities = 212/496 (42%), Positives = 301/496 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IA L + + GP+LVI PL
Sbjct: 763 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAPL 821
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLLTTY 652
ST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+TT+
Sbjct: 822 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 880
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
E I+ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN + E
Sbjct: 881 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEE 939
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 940 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 986
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
K++VE L K E II+ +++ +QK Y+ + + KG G L NT++
Sbjct: 987 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTNMPNLLNTMM 1042
Query: 833 QLRKLCNHPFMFQ-NIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDRILPKFKET 887
+LRK CNHP++ EEK + ++ + R++GK L+D++LPK K
Sbjct: 1043 ELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 1102
Query: 888 KHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLS 947
H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FLL
Sbjct: 1103 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1162
Query: 948 TRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT NS E +
Sbjct: 1163 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1222
Query: 1008 AAARYKLNMDEKVIQA 1023
A KL +D+ V+Q+
Sbjct: 1223 DKASLKLGLDKAVLQS 1238
Score = 585 (211.0 bits), Expect = 6.2e-53, Sum P(2) = 6.2e-53
Identities = 135/320 (42%), Positives = 189/320 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S S F + F +L EE + ++L +
Sbjct: 931 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAI 977
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G
Sbjct: 978 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTN 1033
Query: 121 ARALKNTIVQLRKLCNHPFMFQ-NIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + ++ + R++GK L+D
Sbjct: 1034 MPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLID 1093
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1094 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1153
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 1154 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1213
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1214 RNSYEREMFDKASLKLGLDK 1233
Score = 59 (25.8 bits), Expect = 6.2e-53, Sum P(2) = 6.2e-53
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V L GEDAP +++ WL HP
Sbjct: 2269 RIPVINKVDGTLLVGEDAPRRAELEMWLQGHP 2300
Score = 42 (19.8 bits), Expect = 9.1e-96, Sum P(3) = 9.1e-96
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1062 NQLIARTEDELTLFQKMDAERRKGETKPRLVEIK 1095
N L E + + K+D GE PR E++
Sbjct: 2260 NHLDVDLETRIPVINKVDGTLLVGEDAPRRAELE 2293
Score = 42 (19.8 bits), Expect = 9.1e-96, Sum P(3) = 9.1e-96
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 30 QWFNAPFA-TTGEKVELNEEETILIIRRL---H----KVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E E +E I +R+ H +V RP K E+ + +
Sbjct: 703 KWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN 762
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + + G+ LL+ + + +L D GKT
Sbjct: 763 Q-LREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 796
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 609 (219.4 bits), Expect = 9.6e-96, Sum P(2) = 9.6e-96
Identities = 134/311 (43%), Positives = 191/311 (61%)
Query: 506 EKKTEDDEYKDA--GEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
+KK+ D +K E+ T + A + +Q ++ N LK YQ++GL W+++LY N
Sbjct: 182 KKKSITDFFKKQKKNEDTTTQNGAPD--DAAIKQPRLLKNCILKPYQLEGLNWLITLYEN 239
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
LNGILADEMGLGKTVQ+IALL ++ E GP+LV PLSTL NW+ EF K+AP V
Sbjct: 240 GLNGILADEMGLGKTVQSIALLAFIYEMDTK-GPFLVTAPLSTLDNWMNEFAKFAPDLPV 298
Query: 624 VAYKGSPLARRALQGRMKN-----SKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRM 678
+ Y G+ + ++KN +++T+YE I++D ++ WK +I+DEGHR+
Sbjct: 299 LKYYGTN-GYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRL 357
Query: 679 KNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWF--- 735
KN +C+L + L N+S+R+LLTGTPLQN L ELW+LLNF++P IF F +WF
Sbjct: 358 KNINCRLIKELKKI-NTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFD 416
Query: 736 --NAPFATTGEKVE--LNEEETILIIRRLHKVLRPFLLRRLKKEVESQ-LPEKVEYIIKC 790
N + E + +N+E +I LH +L+PFLLRRLKK V + LP K EYII C
Sbjct: 417 SLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINC 476
Query: 791 DMSGLQKLLYQ 801
M+ Q+ Y+
Sbjct: 477 PMTSAQEKFYK 487
Score = 406 (148.0 bits), Expect = 9.6e-96, Sum P(2) = 9.6e-96
Identities = 85/217 (39%), Positives = 130/217 (59%)
Query: 825 RALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKF 884
+ L+N ++QLR++ + F+F Y ++ + + + +TSGK ++L +++P
Sbjct: 564 KKLQNMMMQLRQIIDSTFLF------YFPYLHPEDLTLE--TLLKTSGKLQILQKLIPPL 615
Query: 885 KETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIF 944
H+VL++ Q ++ ++ED+ F+ R+DG+ +E R + L KFN + K+ IF
Sbjct: 616 ISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIF 675
Query: 945 LLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEE 1004
LLSTRA GLG+NL ADTV++FDSDWNP DLQA DR HRIGQ++ V V RL N++E
Sbjct: 676 LLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEH 735
Query: 1005 RILAAARYKLNMDEKVIQAGMFDQ-KSTGSERHEFLQ 1040
IL A K N++ VIQ G F+ K FL+
Sbjct: 736 VILTRAANKRNLERMVIQMGKFNNLKKLALNEGSFLK 772
Score = 381 (139.2 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 77/193 (39%), Positives = 120/193 (62%)
Query: 122 RALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKF 181
+ L+N ++QLR++ + F+F Y ++ + + + +TSGK ++L +++P
Sbjct: 564 KKLQNMMMQLRQIIDSTFLF------YFPYLHPEDLTLE--TLLKTSGKLQILQKLIPPL 615
Query: 182 KETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIF 241
H+VL++ Q ++ ++ED+ F+ R+DG+ +E R + L KFN + K+ IF
Sbjct: 616 ISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIF 675
Query: 242 LLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEE 301
LLSTRA GLG+NL ADTV++FDSDWNP DLQA DR HRIGQ++ V V RL N++E
Sbjct: 676 LLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEH 735
Query: 302 RILAAARYKLNMD 314
IL A K N++
Sbjct: 736 VILTRAANKRNLE 748
Score = 214 (80.4 bits), Expect = 2.2e-51, Sum P(2) = 2.2e-51
Identities = 48/106 (45%), Positives = 63/106 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWF-----NAPFATTGEKVE--LNEEETILI 53
TPLQN L ELW+LLNF++P IF F +WF N + E + +N+E +
Sbjct: 382 TPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNL 441
Query: 54 IRRLHKVLRPFLLRRLKKEVESQ-LPEKVEYIIKCDMSGLQKLLYQ 98
I LH +L+PFLLRRLKK V + LP K EYII C M+ Q+ Y+
Sbjct: 442 ISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYK 487
Score = 39 (18.8 bits), Expect = 5.3e-33, Sum P(2) = 5.3e-33
Identities = 15/52 (28%), Positives = 21/52 (40%)
Query: 194 MTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLST 245
M + E + W DF L L + SE +L+ N+ K I L T
Sbjct: 399 MPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLI---NDELQKNLISNLHT 447
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 946 (338.1 bits), Expect = 9.8e-96, Sum P(3) = 9.8e-96
Identities = 212/496 (42%), Positives = 301/496 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IA L + + GP+LVI PL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAPL 868
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLLTTY 652
ST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+TT+
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
E I+ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN + E
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEE 986
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1033
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
K++VE L K E II+ +++ +QK Y+ + + KG G L NT++
Sbjct: 1034 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTNMPNLLNTMM 1089
Query: 833 QLRKLCNHPFMFQ-NIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDRILPKFKET 887
+LRK CNHP++ EEK + ++ + R++GK L+D++LPK K
Sbjct: 1090 ELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 1149
Query: 888 KHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLS 947
H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FLL
Sbjct: 1150 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1209
Query: 948 TRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT NS E +
Sbjct: 1210 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1269
Query: 1008 AAARYKLNMDEKVIQA 1023
A KL +D+ V+Q+
Sbjct: 1270 DKASLKLGLDKAVLQS 1285
Score = 585 (211.0 bits), Expect = 6.4e-53, Sum P(2) = 6.4e-53
Identities = 135/320 (42%), Positives = 189/320 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S S F + F +L EE + ++L +
Sbjct: 978 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAI 1024
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G
Sbjct: 1025 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTN 1080
Query: 121 ARALKNTIVQLRKLCNHPFMFQ-NIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + ++ + R++GK L+D
Sbjct: 1081 MPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLID 1140
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1141 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1200
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 1201 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1260
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1261 RNSYEREMFDKASLKLGLDK 1280
Score = 59 (25.8 bits), Expect = 6.4e-53, Sum P(2) = 6.4e-53
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V L GEDAP +++ WL HP
Sbjct: 2316 RIPVINKVDGTLLVGEDAPRRAELEMWLQGHP 2347
Score = 42 (19.8 bits), Expect = 9.8e-96, Sum P(3) = 9.8e-96
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1062 NQLIARTEDELTLFQKMDAERRKGETKPRLVEIK 1095
N L E + + K+D GE PR E++
Sbjct: 2307 NHLDVDLETRIPVINKVDGTLLVGEDAPRRAELE 2340
Score = 42 (19.8 bits), Expect = 9.8e-96, Sum P(3) = 9.8e-96
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 30 QWFNAPFA-TTGEKVELNEEETILIIRRL---H----KVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E E +E I +R+ H +V RP K E+ + +
Sbjct: 750 KWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN 809
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + + G+ LL+ + + +L D GKT
Sbjct: 810 Q-LREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 843
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 946 (338.1 bits), Expect = 1.0e-95, Sum P(3) = 1.0e-95
Identities = 212/496 (42%), Positives = 301/496 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+EYQ++G+ W++ + N N ILADEMGLGKT+Q+IA L + + GP+LVI PL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIH-GPFLVIAPL 868
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMKNS--KFNVLLTTY 652
ST++NW EF W N + Y GS +R+ +Q GR+ KF+ L+TT+
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTF 927
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
E I+ D L +I+W+C+IIDE HR+KN +CKL +L + H+VLLTGTPLQN + E
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHM-DLEHKVLLTGTPLQNTVEE 986
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRL 772
L++LL+FL PS F S S F + F +L EE + ++L +L+P +LRRL
Sbjct: 987 LFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAILKPMMLRRL 1033
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIV 832
K++VE L K E II+ +++ +QK Y+ + + KG G L NT++
Sbjct: 1034 KEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTNMPNLLNTMM 1089
Query: 833 QLRKLCNHPFMFQ-NIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLDRILPKFKET 887
+LRK CNHP++ EEK + ++ + R++GK L+D++LPK K
Sbjct: 1090 ELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 1149
Query: 888 KHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLS 947
H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+S F+FLL
Sbjct: 1150 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1209
Query: 948 TRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT NS E +
Sbjct: 1210 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1269
Query: 1008 AAARYKLNMDEKVIQA 1023
A KL +D+ V+Q+
Sbjct: 1270 DKASLKLGLDKAVLQS 1285
Score = 585 (211.0 bits), Expect = 6.5e-53, Sum P(2) = 6.5e-53
Identities = 135/320 (42%), Positives = 189/320 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL PS F S S F + F +L EE + ++L +
Sbjct: 978 TPLQNTVEELFSLLHFLEPSQFPSESEFLKDFG----------DLKTEEQV---QKLQAI 1024
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +++ +QK Y+ + + KG G
Sbjct: 1025 LKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLS---KG-AGHTN 1080
Query: 121 ARALKNTIVQLRKLCNHPFMFQ-NIEEKYCQHIGQNNTVVSGP----DIYRTSGKFELLD 175
L NT+++LRK CNHP++ EEK + ++ + R++GK L+D
Sbjct: 1081 MPNLLNTMMELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLID 1140
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1141 KLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1200
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 1201 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLIT 1260
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1261 RNSYEREMFDKASLKLGLDK 1280
Score = 59 (25.8 bits), Expect = 6.5e-53, Sum P(2) = 6.5e-53
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
RI V L GEDAP +++ WL HP
Sbjct: 2318 RIPVINKVDGTLLVGEDAPRRAELEMWLQGHP 2349
Score = 42 (19.8 bits), Expect = 1.0e-95, Sum P(3) = 1.0e-95
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1062 NQLIARTEDELTLFQKMDAERRKGETKPRLVEIK 1095
N L E + + K+D GE PR E++
Sbjct: 2309 NHLDVDLETRIPVINKVDGTLLVGEDAPRRAELE 2342
Score = 42 (19.8 bits), Expect = 1.0e-95, Sum P(3) = 1.0e-95
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 30 QWFNAPFA-TTGEKVELNEEETILIIRRL---H----KVLRPFLLRRLKKEVESQLPEKV 81
+W + P+ +T E E +E I +R+ H +V RP K E+ + +
Sbjct: 750 KWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN 809
Query: 82 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ + + + G+ LL+ + + +L D GKT
Sbjct: 810 Q-LREYQLEGVNWLLFNWYNRQNCILADEMGLGKT 843
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 945 (337.7 bits), Expect = 1.0e-95, Sum P(3) = 1.0e-95
Identities = 211/511 (41%), Positives = 308/511 (60%)
Query: 531 HEKVTEQASIMVN-GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLM 589
H K E++ N L++YQ++G+ W++ + N N ILADEMGLGKT+Q+I L +
Sbjct: 897 HWKKLEKSRKYCNENSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIY 956
Query: 590 EKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GR 639
GP+L+I PLST++NW EF W NV+ Y GS ++R+ LQ GR
Sbjct: 957 RTGIK-GPFLIIAPLSTIANWEREFRTWT-HLNVIVYHGSVVSRQMLQQYEMYCRDSQGR 1014
Query: 640 MKNS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSH 697
+ +F ++TT+E I+ L+ I W+C+IIDE HR+KN +CKL + + H
Sbjct: 1015 VIRGAYRFQAVITTFEMILGGCPELNAIDWRCVIIDEAHRLKNKNCKLLEGFKLM-SLEH 1073
Query: 698 RVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILII 757
+VLLTGTPLQN + EL++LL+FL P+ F S +TF Q F +L EE +
Sbjct: 1074 KVLLTGTPLQNTVEELFSLLHFLEPTRFPSENTFMQEFG----------DLKTEEQV--- 1120
Query: 758 RRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 817
++L +L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG
Sbjct: 1121 QKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL---AKG 1177
Query: 818 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSG 872
G+ L NT+++LRK CNHP++ + EEK + + + + D + +++G
Sbjct: 1178 -AGQANVPNLLNTMMELRKCCNHPYLIKGAEEKIMEDFKEVYSPAA-VDFHLQAMIQSAG 1235
Query: 873 KFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLR 932
K L+D++LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R +
Sbjct: 1236 KLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAID 1295
Query: 933 KFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR 992
+F++P+S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+
Sbjct: 1296 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVK 1355
Query: 993 VLRLITVNSVEERILAAARYKLNMDEKVIQA 1023
V RLIT NS E + A KL +D+ V+Q+
Sbjct: 1356 VYRLITRNSYEREMFDRASLKLGLDKAVLQS 1386
Score = 601 (216.6 bits), Expect = 4.8e-57, Sum P(2) = 4.8e-57
Identities = 135/320 (42%), Positives = 195/320 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LL+FL P+ F S +TF Q F +L EE + ++L +
Sbjct: 1080 TPLQNTVEELFSLLHFLEPTRFPSENTFMQEFG----------DLKTEEQV---QKLQAI 1126
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE +L K E II+ +++ +QK Y+ + + KG G+
Sbjct: 1127 LKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL---AKG-AGQAN 1182
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-----RTSGKFELLD 175
L NT+++LRK CNHP++ + EEK + + + + D + +++GK L+D
Sbjct: 1183 VPNLLNTMMELRKCCNHPYLIKGAEEKIMEDFKEVYSPAA-VDFHLQAMIQSAGKLVLID 1241
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK K H+VL+F QM + + ILEDY I R + Y R+DG + R + +F++P+
Sbjct: 1242 KLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPD 1301
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADT IIFDSDWNP DLQAQ R HRIGQ V+V RLIT
Sbjct: 1302 SDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLIT 1361
Query: 296 VNSVEERILAAARYKLNMDE 315
NS E + A KL +D+
Sbjct: 1362 RNSYEREMFDRASLKLGLDK 1381
Score = 83 (34.3 bits), Expect = 4.8e-57, Sum P(2) = 4.8e-57
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
R+ V +L GEDAP K++ +WL HPG+
Sbjct: 2537 RVPVISLKDGTRLAGEDAPKRKELDQWLKEHPGF 2570
Score = 48 (22.0 bits), Expect = 2.3e-53, Sum P(2) = 2.3e-53
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKEWLASHP 474
R+ + + K+ G APP K + +L +P
Sbjct: 2614 RVQIINRRNARKIGGAFAPPLKDLSRFLQENP 2645
Score = 46 (21.3 bits), Expect = 1.0e-95, Sum P(3) = 1.0e-95
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE 222
+E+YF+ ++++SYL + T+ +
Sbjct: 766 IEEYFVKYKNYSYLHCEWATEQQ 788
Score = 42 (19.8 bits), Expect = 1.0e-95, Sum P(3) = 1.0e-95
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 513 EYKDAGEEATYYSI---AHTYHEKVTEQASIMVNGKLKEYQ 550
E KD+GE YY + + Y + E + K++E++
Sbjct: 838 EDKDSGEPVVYYLVKWCSLPYEDSTWELMEDVDQTKIEEFK 878
Score = 40 (19.1 bits), Expect = 9.0e-94, Sum P(2) = 9.0e-94
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 89 MSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ G+ LL+ + R +L D GKT
Sbjct: 918 LEGVNWLLFNWYNRRNCILADEMGLGKT 945
Score = 38 (18.4 bits), Expect = 7.1e-95, Sum P(3) = 7.1e-95
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 447 KETNSDNKLRGEDAPPAKQIKE 468
K+T+S +L +D P + K+
Sbjct: 663 KKTDSSEELSDDDRPTRRSSKD 684
Score = 37 (18.1 bits), Expect = 3.3e-52, Sum P(2) = 3.3e-52
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 808 ILLTDGSEKGKTGEGGARALKN 829
+++TD E G +GG L +
Sbjct: 1815 LVITDAGEGGSMLDGGGGTLSS 1836
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 647 (232.8 bits), Expect = 2.3e-95, Sum P(4) = 2.3e-95
Identities = 131/315 (41%), Positives = 201/315 (63%)
Query: 541 MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
M+ KLKEYQ+KGL W+ +LY +NGILADEMGLGKTVQ+I+++ YL E GP+LV
Sbjct: 837 MLMCKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLV 896
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQG-----RM---KNSKFNVLLTTY 652
I P STL NW E ++ P + Y GS R+ L+ M +NS F+V++T+Y
Sbjct: 897 IAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSY 956
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
+ ++ D ++W+ MI+DE +K+ ++L F +R+LLTGTP+QN + E
Sbjct: 957 QLVVLDAQYFQSVKWQYMILDEAQAIKSSSSSRWKSLLAF-KCRNRLLLTGTPIQNTMQE 1015
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VELNEEETILIIRRLHKVLRPFLLRR 771
LWALL+F++PS+F S + F +WF+ + + +LNE++ ++RLH +L+PF+LRR
Sbjct: 1016 LWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQ----LKRLHMILKPFMLRR 1071
Query: 772 LKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTG-EGGARALKNT 830
+KK V+S+L EK+E + CD++ QK+LYQ L R I + + EK G + ++ N
Sbjct: 1072 VKKNVQSELGEKIEKEVYCDLTQRQKILYQALR-RQISIAELLEKAILGGDDTVASIMNL 1130
Query: 831 IVQLRKLCNHPFMFQ 845
++Q RK+CNHP +F+
Sbjct: 1131 VMQFRKVCNHPDLFE 1145
Score = 395 (144.1 bits), Expect = 2.3e-95, Sum P(4) = 2.3e-95
Identities = 78/155 (50%), Positives = 109/155 (70%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD++L + K HRVL++ QMT+++ ++E+Y +R + YLRLDG++K R ++
Sbjct: 1428 SGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRDM 1487
Query: 931 LRKFN-EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 989
+ ++ PE F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHRIGQ+
Sbjct: 1488 VTEWQTRPE--LFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQK 1545
Query: 990 EVRVLRLITVNSVEERILAAARYKLNMDEKVIQAG 1024
+V V R IT ++EERI+ A+ K + + VI G
Sbjct: 1546 QVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGG 1580
Score = 387 (141.3 bits), Expect = 3.9e-58, Sum P(2) = 3.9e-58
Identities = 77/164 (46%), Positives = 112/164 (68%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD++L + K HRVL++ QMT+++ ++E+Y +R + YLRLDG++K R ++
Sbjct: 1428 SGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGSSKISQRRDM 1487
Query: 228 LRKFN-EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 286
+ ++ PE F+FLLSTRAGGLG+NL AADTVI +DSDWNP D QA DRAHRIGQ+
Sbjct: 1488 VTEWQTRPE--LFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRAHRIGQQK 1545
Query: 287 EVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLN 330
+V V R IT ++EERI+ A+ K + + T T++++
Sbjct: 1546 QVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGGETRPTKQMD 1589
Score = 308 (113.5 bits), Expect = 5.3e-59, Sum P(2) = 5.3e-59
Identities = 60/144 (41%), Positives = 97/144 (67%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++PS+F S + F +WF+ + + +LNE++ ++RLH
Sbjct: 1007 TPIQNTMQELWALLHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQ----LKRLHM 1062
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTG-E 118
+L+PF+LRR+KK V+S+L EK+E + CD++ QK+LYQ L R I + + EK G +
Sbjct: 1063 ILKPFMLRRVKKNVQSELGEKIEKEVYCDLTQRQKILYQALR-RQISIAELLEKAILGGD 1121
Query: 119 GGARALKNTIVQLRKLCNHPFMFQ 142
++ N ++Q RK+CNHP +F+
Sbjct: 1122 DTVASIMNLVMQFRKVCNHPDLFE 1145
Score = 43 (20.2 bits), Expect = 2.3e-95, Sum P(4) = 2.3e-95
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 361 AEDEEGYRKLIDQKKDKRLAFLLSQTDEY 389
A+ EE R+ +++ ++L FL++QT+ Y
Sbjct: 715 AKKEEELRE--SRRQARKLDFLITQTELY 741
Score = 43 (20.2 bits), Expect = 2.3e-95, Sum P(4) = 2.3e-95
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 70 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
KK VE+ + ++ I + ++ + K++ Q+ +NR
Sbjct: 616 KKTVETLQQQVIKEIARKEIPRVYKIIQQNQYNR 649
Score = 43 (20.2 bits), Expect = 3.7e-31, Sum P(2) = 3.7e-31
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 773 KKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 806
KK VE+ + ++ I + ++ + K++ Q+ +NR
Sbjct: 616 KKTVETLQQQVIKEIARKEIPRVYKIIQQNQYNR 649
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 946 (338.1 bits), Expect = 3.9e-95, Sum P(2) = 3.9e-95
Identities = 215/512 (41%), Positives = 304/512 (59%)
Query: 533 KVTEQASIMVNGK-LKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K + + NG L+EYQ +G++W++ Y N N ILADEMGLGKTVQTI L+ + +
Sbjct: 1183 KKMSTSKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDY 1242
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ-----------GRM 640
+ GP+LV+VPLST+ NWV EFE W N + Y GS AR LQ G
Sbjct: 1243 GIH-GPFLVVVPLSTIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAK 1300
Query: 641 ---KNS-KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSS 696
KN K + L+TT+E ++ D L KI W+ +IDE HR+KN +CKL +
Sbjct: 1301 NWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRME 1360
Query: 697 HRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILI 756
HRVLLTGTPLQN + EL++LLNFL P F + +TF + F + T ++V+
Sbjct: 1361 HRVLLTGTPLQNNIDELFSLLNFLHPQQFDNSATFLEQFGS--CQTDDQVQ--------- 1409
Query: 757 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 816
+L ++L+P +LRRLK++VE L K E II+ +S +QK Y R IL + S
Sbjct: 1410 --KLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFY-----RAILERNFSHL 1462
Query: 817 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQ-----HIGQNNTVVSGPDIYRTS 871
K G A +L N +++LRK CNHPF+ EE H + ++ + + S
Sbjct: 1463 CK-GTS-APSLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQAS 1520
Query: 872 GKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELL 931
GK L++++LPK ++ H+VL+F QM +++ +LE++ I + + R+DG + + R +
Sbjct: 1521 GKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAI 1580
Query: 932 RKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEV 991
+F++ S F+FLL TRAGGLG+NL AADTVIIFDSDWNP DLQAQ R HRIGQK V
Sbjct: 1581 DRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLV 1640
Query: 992 RVLRLITVNSVEERILAAARYKLNMDEKVIQA 1023
+V RLIT N+ E + A KL +D+ V+Q+
Sbjct: 1641 KVYRLITSNTYEREMFDKASLKLGLDKAVLQS 1672
Score = 575 (207.5 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 134/329 (40%), Positives = 196/329 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL P F + +TF + F + T ++V+ +L ++
Sbjct: 1368 TPLQNNIDELFSLLNFLHPQQFDNSATFLEQFGS--CQTDDQVQ-----------KLQEI 1414
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P +LRRLK++VE L K E II+ +S +QK Y R IL + S K G
Sbjct: 1415 LKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFY-----RAILERNFSHLCK-GTS- 1467
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQ-----HIGQNNTVVSGPDIYRTSGKFELLD 175
A +L N +++LRK CNHPF+ EE H + ++ + + SGK L++
Sbjct: 1468 APSLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLIE 1527
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++LPK ++ H+VL+F QM +++ +LE++ I + + R+DG + + R + +F++
Sbjct: 1528 KLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKEN 1587
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLL TRAGGLG+NL AADTVIIFDSDWNP DLQAQ R HRIGQK V+V RLIT
Sbjct: 1588 SDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLIT 1647
Query: 296 VNSVEERILAAARYKLNMDEKEYHRNNTA 324
N+ E + A KL +D K ++ TA
Sbjct: 1648 SNTYEREMFDKASLKLGLD-KAVLQSTTA 1675
Score = 52 (23.4 bits), Expect = 3.9e-95, Sum P(2) = 3.9e-95
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
+KVEL E ++ ++ + RP KK S++ + + + G+ LLY +
Sbjct: 1155 DKVELWRERQVIDPAKIREKQRPEP-EEWKKMSTSKVWKNGNSLREYQFEGVDWLLYCYY 1213
Query: 101 HNRGILLTDGSEKGKT 116
+ + +L D GKT
Sbjct: 1214 NAQNCILADEMGLGKT 1229
Score = 47 (21.6 bits), Expect = 2.2e-50, Sum P(2) = 2.2e-50
Identities = 22/87 (25%), Positives = 34/87 (39%)
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
S A + QAA Q QA +A + E+ +LRL+ + V +
Sbjct: 2491 SATAAAAAASAQAAALAAAQQQQQQAQQAQQAAQQAQSAKTQEELLILRLLELAGVGMQE 2550
Query: 1007 LAAARYKLNMDEKVIQAGMFDQKSTGS 1033
LA KLN K + M +++ S
Sbjct: 2551 LA----KLNTMSKDARVPMIHKQTRES 2573
Score = 37 (18.1 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
I+V + L P A ++ WL ++P +
Sbjct: 2677 ISVFNRKTGELLAASKWPKATELSAWLDANPDY 2709
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 637 (229.3 bits), Expect = 3.3e-94, Sum P(3) = 3.3e-94
Identities = 138/341 (40%), Positives = 204/341 (59%)
Query: 518 GEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGK 577
GEE + + T +T M+ LKEYQ+KGL W+ +LY +NGILADEMGLGK
Sbjct: 646 GEEMNFQN--PTLLGDITIPQPNMLKCTLKEYQLKGLNWLANLYEQGINGILADEMGLGK 703
Query: 578 TVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ 637
TVQ+I++L YL E GP+LV+ P STL NW E K+ P V+ Y G+ R+ L+
Sbjct: 704 TVQSISVLAYLAETYNMWGPFLVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILR 763
Query: 638 ---GRM-----KNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTL 689
R K+S F+VL+T+Y+ I+ D + K++W+ MI+DE +K+ ++L
Sbjct: 764 KFWDRKSLRYDKDSPFHVLVTSYQLIVADIAYFQKMKWQYMILDEAQAIKSSSSSRWKSL 823
Query: 690 NTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VEL 748
+R+LLTGTP+QN + ELWALL+F++PSIF S F WF + + L
Sbjct: 824 LNL-TCRNRLLLTGTPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSL 882
Query: 749 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR-G 807
+E++ +RRLH +L+PF+LRR+KK V+S+L +KVE + CD++ QK LYQ L ++
Sbjct: 883 DEQQ----LRRLHMILKPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQIS 938
Query: 808 ILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
+ TD E +L N ++Q RK+CNHP +F+ +
Sbjct: 939 MSDTDLLELESNSTSSDSSLANLVMQFRKVCNHPDLFERAD 979
Score = 390 (142.3 bits), Expect = 3.3e-94, Sum P(3) = 3.3e-94
Identities = 77/152 (50%), Positives = 107/152 (70%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK LD +L K HR+L++ QMT++M I E+Y ++ + Y+RLDG+T E R E+
Sbjct: 1235 SGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1294
Query: 931 LRKFN-EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 989
++ + PE FIF+LSTRAGGLGLNL +ADTVI +DSDWNP D QA DRAHRIGQ
Sbjct: 1295 VQAWQTNPE--IFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTK 1352
Query: 990 EVRVLRLITVNSVEERILAAARYKLNMDEKVI 1021
+V+V RL+T N++E++IL A+ K + + V+
Sbjct: 1353 QVKVFRLVTRNTIEQKILERAKEKEEIQKLVV 1384
Score = 386 (140.9 bits), Expect = 4.6e-57, Sum P(2) = 4.6e-57
Identities = 76/144 (52%), Positives = 103/144 (71%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK LD +L K HR+L++ QMT++M I E+Y ++ + Y+RLDG+T E R E+
Sbjct: 1235 SGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREM 1294
Query: 228 LRKFN-EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 286
++ + PE FIF+LSTRAGGLGLNL +ADTVI +DSDWNP D QA DRAHRIGQ
Sbjct: 1295 VQAWQTNPE--IFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTK 1352
Query: 287 EVRVLRLITVNSVEERILAAARYK 310
+V+V RL+T N++E++IL A+ K
Sbjct: 1353 QVKVFRLVTRNTIEQKILERAKEK 1376
Score = 297 (109.6 bits), Expect = 1.7e-57, Sum P(2) = 1.7e-57
Identities = 60/147 (40%), Positives = 91/147 (61%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK-VELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++PSIF S F WF + + L+E++ +RRLH
Sbjct: 837 TPIQNSMQELWALLHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQ----LRRLHM 892
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR-GILLTDGSEKGKTGE 118
+L+PF+LRR+KK V+S+L +KVE + CD++ QK LYQ L ++ + TD E
Sbjct: 893 ILKPFMLRRIKKNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQISMSDTDLLELESNST 952
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIE 145
+L N ++Q RK+CNHP +F+ +
Sbjct: 953 SSDSSLANLVMQFRKVCNHPDLFERAD 979
Score = 44 (20.5 bits), Expect = 6.4e-31, Sum P(2) = 6.4e-31
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 627 KGSPLARRALQGRMKNSKFNVLLTTYE 653
KGS ++A QGR+ N + LL E
Sbjct: 449 KGSRSMQQATQGRLINLRKTALLAARE 475
Score = 43 (20.2 bits), Expect = 3.3e-94, Sum P(3) = 3.3e-94
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 361 AEDEEGYRKLIDQKKDKRLAFLLSQTDEY 389
A+ EE R+ +++ ++L FL++QT+ Y
Sbjct: 527 AKKEEEEREA--KRQSRKLNFLITQTELY 553
Score = 42 (19.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 21/90 (23%), Positives = 43/90 (47%)
Query: 706 LQNKLP-ELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRL-HKV 763
+++++P E + N L IF + + A +G+ +L +E ++ ++R H++
Sbjct: 1198 MKDQIPLEQYPKSNMLPMPIFDYSNIRMPSMDRFIAESGKLAKL--DELLIDLKRGGHRI 1255
Query: 764 LRPFLLRRLKKEVESQLPEKVEYIIKCDMS 793
L F + R+ + E L K I+ D S
Sbjct: 1256 LIYFQMTRMMQIFEEYLAYKSYKYIRLDGS 1285
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 640 (230.4 bits), Expect = 5.2e-94, Sum P(3) = 5.2e-94
Identities = 132/335 (39%), Positives = 206/335 (61%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
E EQ I+ LKEYQ+KGL W+ +LY+ +NGILADEMGLGKTVQ+I++L +L E
Sbjct: 693 EITIEQPKILAC-TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAEN 751
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ---GRM-----KNS 643
GP+LV+ P STL NWV E K+ P ++ Y G+ R+ L+ R KN+
Sbjct: 752 HNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNA 811
Query: 644 KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTG 703
F+V++T+Y+ ++ D + L K++W+ MI+DE +K+ + L +F+ +R+LLTG
Sbjct: 812 PFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFH-CRNRLLLTG 870
Query: 704 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 762
TP+QN + ELWALL+F++PS+F S F +WF+ + E +LN+++ +RRLH
Sbjct: 871 TPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQ----LRRLHM 926
Query: 763 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR---------GILLTDG 813
+L+PF+LRR+KK V+S+L +K+E + CD++ Q LYQ L ++ D
Sbjct: 927 ILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDS 986
Query: 814 SEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
+ + G + L N ++Q RK+CNHP +F+ +
Sbjct: 987 TSNSASNSGSDQNLINAVMQFRKVCNHPDLFERAD 1021
Score = 386 (140.9 bits), Expect = 5.2e-94, Sum P(3) = 5.2e-94
Identities = 80/175 (45%), Positives = 117/175 (66%)
Query: 858 NNTVVSGPDIYRT-SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYL 916
+N + D + T S K LD +L K K HRVL++ QMT++M ++E+Y +R ++++
Sbjct: 1284 SNISMPSMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHI 1343
Query: 917 RLDGTTKSEDRGELLRKFN-EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQD 975
RLDG++K EDR +L+ + PE F+FLLSTRAGGLG+NL AADTVI +DSDWNP D
Sbjct: 1344 RLDGSSKLEDRRDLVHDWQTNPE--IFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTID 1401
Query: 976 LQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKS 1030
QA DRAHR+GQ +V V RL+ ++EER+ A+ K + ++V+ G +K+
Sbjct: 1402 SQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQV-QQVVMEGKTQEKN 1455
Score = 377 (137.8 bits), Expect = 7.8e-55, Sum P(2) = 7.8e-55
Identities = 77/158 (48%), Positives = 108/158 (68%)
Query: 155 NNTVVSGPDIYRT-SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYL 213
+N + D + T S K LD +L K K HRVL++ QMT++M ++E+Y +R ++++
Sbjct: 1284 SNISMPSMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEYLTYRQYNHI 1343
Query: 214 RLDGTTKSEDRGELLRKFN-EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQD 272
RLDG++K EDR +L+ + PE F+FLLSTRAGGLG+NL AADTVI +DSDWNP D
Sbjct: 1344 RLDGSSKLEDRRDLVHDWQTNPE--IFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTID 1401
Query: 273 LQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 310
QA DRAHR+GQ +V V RL+ ++EER+ A+ K
Sbjct: 1402 SQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQK 1439
Score = 286 (105.7 bits), Expect = 7.8e-55, Sum P(2) = 7.8e-55
Identities = 57/155 (36%), Positives = 93/155 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHK 59
TP+QN + ELWALL+F++PS+F S F +WF+ + E +LN+++ +RRLH
Sbjct: 871 TPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQ----LRRLHM 926
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR---------GILLTDG 110
+L+PF+LRR+KK V+S+L +K+E + CD++ Q LYQ L ++ D
Sbjct: 927 ILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDS 986
Query: 111 SEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 145
+ + G + L N ++Q RK+CNHP +F+ +
Sbjct: 987 TSNSASNSGSDQNLINAVMQFRKVCNHPDLFERAD 1021
Score = 44 (20.5 bits), Expect = 5.2e-94, Sum P(3) = 5.2e-94
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 361 AEDEEGYRKLIDQKKDKRLAFLLSQTDEY 389
A+ EE ++ +++ K+L FLL+QT+ Y
Sbjct: 565 AKKEEEEKE--SKRQAKKLNFLLTQTELY 591
Score = 40 (19.1 bits), Expect = 1.2e-54, Sum P(3) = 1.2e-54
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 579 VQTIALLTYLMEKKKNLGPYLV-IVPLSTLSNWVLEFEKWAPSANVVA 625
V T LL ++E+ GP + T++ +LE + APS V+A
Sbjct: 1143 VSTTPLLKRVIERTN--GPKNTDSLSFKTITQELLEVTRNAPSEGVMA 1188
Score = 39 (18.8 bits), Expect = 1.6e-54, Sum P(3) = 1.6e-54
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 636 LQGRMKNSKFNVL--LTTYEFII 656
+ ++KN KFN+ T YE +
Sbjct: 1104 IANKLKNVKFNIFNPSTNYELCL 1126
Score = 38 (18.4 bits), Expect = 2.2e-93, Sum P(3) = 2.2e-93
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 505 GEKKTEDDEYKDAGEE 520
GE+ E++E +D EE
Sbjct: 258 GEEDEEEEEIEDLDEE 273
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 652 (234.6 bits), Expect = 3.9e-93, Sum P(2) = 3.9e-93
Identities = 133/315 (42%), Positives = 195/315 (61%)
Query: 541 MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
++ G L+EYQ GL+W+ LY+N++NGILADEMGLGKT+QTIALL +L + GP+LV
Sbjct: 820 LLRGTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPHLV 879
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ-GRMKNSKFNVLLTTYEFIIKDK 659
+VP S + NW +EF+KW P ++ Y G+ RR + G M ++ +NVL+T+Y+ +++D+
Sbjct: 880 VVPTSVILNWEMEFKKWCPGFKIMTYYGNQEERRQKRRGWMDDNSWNVLITSYQLVLQDQ 939
Query: 660 SVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNF 719
VL + W MI+DE H +KN + Q L TF + R+LLTGTPLQN L ELW+LL F
Sbjct: 940 QVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRA-RLLLTGTPLQNNLTELWSLLFF 998
Query: 720 LLPSI--------FKSCSTFEQWFNAPFATTGEKV-ELNEEETILIIRRLHKVLRPFLLR 770
L+P+ F F +WF P E E ++E ++ +LH VLRP++LR
Sbjct: 999 LMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAKQVVTKLHTVLRPYILR 1058
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
RLK +VE Q+P K E+++ C +S Q+ LY +R K G ++ N
Sbjct: 1059 RLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRA------QTKETLASGNYLSIINC 1112
Query: 831 IVQLRKLCNHPFMFQ 845
++QLRK+CNHP +F+
Sbjct: 1113 LMQLRKVCNHPDLFE 1127
Score = 364 (133.2 bits), Expect = 3.9e-93, Sum P(2) = 3.9e-93
Identities = 76/176 (43%), Positives = 105/176 (59%)
Query: 854 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 910
H Q ++ PD + GK + LD++L K HR L+F QMT+++ +LE +
Sbjct: 1352 HEAQMRLSIAFPDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNI 1411
Query: 911 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 970
YLRLDGTTK E R L +FN +++ F+LS+R+GGLG+NL ADTVI +D DW
Sbjct: 1412 HGHRYLRLDGTTKVEQRQILTDRFNN-DNRILAFILSSRSGGLGINLTGADTVIFYDLDW 1470
Query: 971 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
NP D Q QDR HRIGQ +V + R ++ ++E IL A K +D+ VIQ G F
Sbjct: 1471 NPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGEF 1526
Score = 344 (126.2 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 71/168 (42%), Positives = 100/168 (59%)
Query: 151 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 207
H Q ++ PD + GK + LD++L K HR L+F QMT+++ +LE +
Sbjct: 1352 HEAQMRLSIAFPDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNI 1411
Query: 208 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 267
YLRLDGTTK E R L +FN +++ F+LS+R+GGLG+NL ADTVI +D DW
Sbjct: 1412 HGHRYLRLDGTTKVEQRQILTDRFNN-DNRILAFILSSRSGGLGINLTGADTVIFYDLDW 1470
Query: 268 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
NP D Q QDR HRIGQ +V + R ++ ++E IL A K +D+
Sbjct: 1471 NPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDD 1518
Score = 253 (94.1 bits), Expect = 5.9e-49, Sum P(3) = 5.9e-49
Identities = 57/151 (37%), Positives = 83/151 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSI--------FKSCSTFEQWFNAPFATTGEKV-ELNEEETI 51
TPLQN L ELW+LL FL+P+ F F +WF P E E ++E
Sbjct: 983 TPLQNNLTELWSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAK 1042
Query: 52 LIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGS 111
++ +LH VLRP++LRRLK +VE Q+P K E+++ C +S Q+ LY +R
Sbjct: 1043 QVVTKLHTVLRPYILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRA------Q 1096
Query: 112 EKGKTGEGGARALKNTIVQLRKLCNHPFMFQ 142
K G ++ N ++QLRK+CNHP +F+
Sbjct: 1097 TKETLASGNYLSIINCLMQLRKVCNHPDLFE 1127
Score = 44 (20.5 bits), Expect = 5.9e-49, Sum P(3) = 5.9e-49
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 302 RILAAARYKLNMDEKEYHRNN 322
RI+A A + + E++YHR N
Sbjct: 1190 RIMAYAPFN-TLRERQYHRTN 1209
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 927 (331.4 bits), Expect = 5.8e-93, Sum P(2) = 5.8e-93
Identities = 214/511 (41%), Positives = 306/511 (59%)
Query: 533 KVTEQASIMVNGK-LKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
K E+ + G L+ YQ++GL W+ + N N ILADEMGLGKT+Q++ + + E
Sbjct: 2015 KKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEY 2074
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQ----------GRMK 641
GP+LVI PLST+ NW EFE W NVV Y GS +++ +Q G++
Sbjct: 2075 GIR-GPFLVIAPLSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVL 2132
Query: 642 NS--KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
KFNVL+TT+E I+ D L W+ +IDE HR+KN +CKL + L N HRV
Sbjct: 2133 KEPIKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQL-NLEHRV 2191
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 759
LL+GTPLQN + EL++LLNFL PS F S ++ F + F + EEE + +
Sbjct: 2192 LLSGTPLQNNISELFSLLNFLEPSQFSS----QEEFMSEFGSLR-----TEEE----VNK 2238
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGS--EKG 817
L +L+P +LRRLK +VE L K E II+ +++ +QK Y RGIL + S +KG
Sbjct: 2239 LQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYY-----RGILEQNFSFLKKG 2293
Query: 818 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEK--Y---CQHIGQNNTVVSGPDIYRTSG 872
T L NT+++LRK C HP++ EE+ Y QH G++ ++ ++G
Sbjct: 2294 TTS-ANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQH-GEDPESYY-KNLILSAG 2350
Query: 873 KFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLR 932
K L+D++LPK K HRVL+F QM + + ILEDY ++R + + R+DG + R E +
Sbjct: 2351 KMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAID 2410
Query: 933 KFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR 992
++++P S F+FLL T+AGGLG+NL AADTVII+DSDWNP DLQAQ R HRIGQ+ V+
Sbjct: 2411 RYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVK 2470
Query: 993 VLRLITVNSVEERILAAARYKLNMDEKVIQA 1023
+ RL+ N+ E + A KL +D+ V+Q+
Sbjct: 2471 IYRLLCRNTYEREMFDKASMKLGLDKAVLQS 2501
Score = 582 (209.9 bits), Expect = 3.2e-51, Sum P(2) = 3.2e-51
Identities = 137/330 (41%), Positives = 198/330 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL++LLNFL PS F S ++ F + F + EEE + +L +
Sbjct: 2196 TPLQNNISELFSLLNFLEPSQFSS----QEEFMSEFGSLR-----TEEE----VNKLQAL 2242
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGS--EKGKTGE 118
L+P +LRRLK +VE L K E II+ +++ +QK Y RGIL + S +KG T
Sbjct: 2243 LKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYY-----RGILEQNFSFLKKGTTS- 2296
Query: 119 GGARALKNTIVQLRKLCNHPFMFQNIEEK--Y---CQHIGQNNTVVSGPDIYRTSGKFEL 173
L NT+++LRK C HP++ EE+ Y QH G++ ++ ++GK L
Sbjct: 2297 ANIPNLMNTMMELRKCCIHPYLLNGAEEQIQYDFKSQH-GEDPESYY-KNLILSAGKMVL 2354
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
+D++LPK K HRVL+F QM + + ILEDY ++R + + R+DG + R E + ++++
Sbjct: 2355 IDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSK 2414
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P S F+FLL T+AGGLG+NL AADTVII+DSDWNP DLQAQ R HRIGQ+ V++ RL
Sbjct: 2415 PGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRL 2474
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNT 323
+ N+ E + A KL +D+ NT
Sbjct: 2475 LCRNTYEREMFDKASMKLGLDKAVLQSMNT 2504
Score = 58 (25.5 bits), Expect = 5.8e-93, Sum P(2) = 5.8e-93
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 201 LEDYFI-WRDFSYLRLDGTTKSE----DR--GELLRKFNEPESK 237
+E+YF+ +R+FSYL + T+ E DR +R+F + +S+
Sbjct: 1879 VEEYFVKYRNFSYLHCEWRTEEELLKGDRRVAAKIRRFQQKQSQ 1922
Score = 54 (24.1 bits), Expect = 3.2e-51, Sum P(2) = 3.2e-51
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 444 ITVKETNSDNKLRGEDAPPAKQIKEWLASHPGW 476
+ V + +L G AP K++ +WL +P +
Sbjct: 4574 VPVINKQTGKRLGGNKAPQLKRLMQWLTENPNY 4606
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 573 (206.8 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 129/305 (42%), Positives = 184/305 (60%)
Query: 546 LKEYQIKGLEWMVSLYNNNLNG-ILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
L+ YQ+ G++W+ SL N G IL DEMGLGKT QTI+LL Y K GP+LV+ PL
Sbjct: 35 LRPYQLDGVKWL-SLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPL 93
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNS-KFNVLLTTYEFIIKDKSVLS 663
+ L NW E E++ PS +V+ Y G R LQ +K+ +F+VLLTTYE +KD L
Sbjct: 94 AVLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYEMCLKDARYLK 153
Query: 664 KIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPS 723
+WK +++DE HR+KN L QTL F RVLLTGTP+QN L E+++LL F+ PS
Sbjct: 154 SWKWKILVVDEAHRLKNQESLLHQTLKEF-TVGFRVLLTGTPIQNNLQEVYSLLTFIQPS 212
Query: 724 IFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEK 783
+F E + NA +A ++ E + + LH+VL+PFLLRR+K EV ++LP+K
Sbjct: 213 VFLP-EAVEDFVNA-YA------DIQTEPAL--VDELHQVLQPFLLRRVKAEVAAELPKK 262
Query: 784 VEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFM 843
E ++ +S LQK Y + IL+ D + +T + L N ++QLRK +HP++
Sbjct: 263 TELVVFHGLSALQKRYY-----KAILMRD-LDAFRTDQSTKTRLLNVLMQLRKCVDHPYL 316
Query: 844 FQNIE 848
F +E
Sbjct: 317 FDGVE 321
Score = 429 (156.1 bits), Expect = 2.7e-92, Sum P(2) = 2.7e-92
Identities = 114/320 (35%), Positives = 168/320 (52%)
Query: 794 GLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQ 853
GL L Q + + IL+ D + +T + L N ++QLRK +HP++F +E + +
Sbjct: 270 GLSAL--QKRYYKAILMRD-LDAFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGVEPEPFE 326
Query: 854 HIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDF 913
G + SGK LLD +L +E H VL+F QMT+++ IL+DY +R +
Sbjct: 327 ---------MGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGY 377
Query: 914 SYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 973
SY RLDG+ + E+R ++ F+ + FIFLLST+AGG+G+NL AADTVI D D+NP
Sbjct: 378 SYERLDGSVRGEERNLAIKNFSTKD--VFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQ 435
Query: 974 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGS 1033
DLQA RAHRIGQ V+V+RL+ +++EE I + A KL + + VI+ G F
Sbjct: 436 NDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQ 495
Query: 1034 ERHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGETKPRLVE 1093
LQ L + + Q + + +L L Q D + E +L E
Sbjct: 496 SAASGLQ--LSEILKFGVDKLLSSEESSVQDV---DLQLILGQSRDGQWLTDEEHAKLNE 550
Query: 1094 IKELPDWMVKDDDEVENSMY 1113
E D +D E +N MY
Sbjct: 551 SNEEED----EDMEGQNHMY 566
Score = 408 (148.7 bits), Expect = 6.1e-33, Sum P(2) = 6.1e-33
Identities = 92/225 (40%), Positives = 136/225 (60%)
Query: 91 GLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQ 150
GL L Q + + IL+ D + +T + L N ++QLRK +HP++F +E + +
Sbjct: 270 GLSAL--QKRYYKAILMRD-LDAFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGVEPEPFE 326
Query: 151 HIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDF 210
G + SGK LLD +L +E H VL+F QMT+++ IL+DY +R +
Sbjct: 327 ---------MGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGY 377
Query: 211 SYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 270
SY RLDG+ + E+R ++ F+ + FIFLLST+AGG+G+NL AADTVI D D+NP
Sbjct: 378 SYERLDGSVRGEERNLAIKNFSTKD--VFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQ 435
Query: 271 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
DLQA RAHRIGQ V+V+RL+ +++EE I + A KL + +
Sbjct: 436 NDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTD 480
Score = 353 (129.3 bits), Expect = 6.2e-27, Sum P(2) = 6.2e-27
Identities = 86/252 (34%), Positives = 139/252 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L E+++LL F+ PS+F E + NA +A ++ E + + LH+V
Sbjct: 193 TPIQNNLQEVYSLLTFIQPSVFLP-EAVEDFVNA-YA------DIQTEPAL--VDELHQV 242
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K EV ++LP+K E ++ +S LQK Y + IL+ D + +T +
Sbjct: 243 LQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYY-----KAILMRD-LDAFRTDQST 296
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L N ++QLRK +HP++F +E + + G + SGK LLD +L
Sbjct: 297 KTRLLNVLMQLRKCVDHPYLFDGVEPEPFE---------MGEHLVEASGKLSLLDSMLAY 347
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
+E H VL+F QMT+++ IL+DY +R +SY RLDG+ + E+R ++ F+ + F+
Sbjct: 348 LQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKDVFIFL 407
Query: 241 FLLSTRAGGLGL 252
G+ L
Sbjct: 408 LSTKAGGVGMNL 419
Score = 40 (19.1 bits), Expect = 6.1e-33, Sum P(2) = 6.1e-33
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 773 KKEVESQLPEKVEYIIK-CDMSGLQKLLYQHLHNRGI 808
+K+ LP ++ + K + G ++L+ +HL RGI
Sbjct: 826 QKKASVHLP-RIGHSTKGFNWYGTERLIRKHLATRGI 861
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 886 (316.9 bits), Expect = 6.1e-91, Sum P(3) = 6.1e-91
Identities = 202/518 (38%), Positives = 306/518 (59%)
Query: 524 YSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIA 583
Y+ EK++ Q + G+L+++Q+ G+ WM L++ NGILADEMGLGKTVQT+A
Sbjct: 354 YTSQRPRFEKLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVA 413
Query: 584 LLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGR--MK 641
+++L+ ++ GP++++VPLST+ W+ FEKWAP N + Y G+ +R ++
Sbjct: 414 FISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYT 473
Query: 642 NSKFNVLLTT-YEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNS----- 695
N + T + ++ + K + + I + +L ++ Y S
Sbjct: 474 NPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFK 533
Query: 696 -SHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETI 754
++R+L+TGTPLQN + EL AL+NFL+P F T +Q + F E+ +EE
Sbjct: 534 VANRMLITGTPLQNNIKELAALVNFLMPGRF----TIDQEID--FENQDEE----QEE-- 581
Query: 755 LIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDG 813
I LH+ ++PF+LRRLKK+VE LP K E I++ ++S +Q Y+++ + LT G
Sbjct: 582 -YIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAG 640
Query: 814 SEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNN----TVVSGPDIYR 869
++ GG +L N + +L+K NHP++F N EE+ Q G V+ G +
Sbjct: 641 AK------GGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRG--LIM 692
Query: 870 TSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGE 929
+SGK LLD++L + K+ HRVL+F QM +++ IL DY + ++ RLDGT S R
Sbjct: 693 SSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRI 752
Query: 930 LLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 989
+ FN P+S F+FLLSTRAGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQKN
Sbjct: 753 SIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKN 812
Query: 990 EVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFD 1027
V V RL++ ++VEE +L AR K+ ++ +I G+ D
Sbjct: 813 HVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTD 850
Score = 619 (223.0 bits), Expect = 9.1e-56, Sum P(2) = 9.1e-56
Identities = 141/319 (44%), Positives = 198/319 (62%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL AL+NFL+P F T +Q + F E+ +EE I LH+
Sbjct: 543 TPLQNNIKELAALVNFLMPGRF----TIDQEID--FENQDEE----QEE---YIHDLHRR 589
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGEG 119
++PF+LRRLKK+VE LP K E I++ ++S +Q Y+++ + LT G++ G
Sbjct: 590 IQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAK------G 643
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNN----TVVSGPDIYRTSGKFELLD 175
G +L N + +L+K NHP++F N EE+ Q G V+ G + +SGK LLD
Sbjct: 644 GHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRG--LIMSSGKMVLLD 701
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++L + K+ HRVL+F QM +++ IL DY + ++ RLDGT S R + FN P+
Sbjct: 702 QLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPD 761
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S F+FLLSTRAGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQKN V V RL++
Sbjct: 762 SNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVS 821
Query: 296 VNSVEERILAAARYKLNMD 314
++VEE +L AR K+ ++
Sbjct: 822 KDTVEEEVLERARKKMILE 840
Score = 42 (19.8 bits), Expect = 6.1e-91, Sum P(3) = 6.1e-91
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 1069 EDELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVENSMYXXXXXXXXXXA--LM 1126
E+EL Q + +R+ E +E+ D +K +++NS+
Sbjct: 938 EEELKKLQDEEQKRKDEEYVKEQLEMMNRRDNALK---KIKNSVNGDGTAANSDSDDDST 994
Query: 1127 GRGSRQRKQVDYTDSLTDQE 1146
R SR+R + + DS+ + E
Sbjct: 995 SRSSRRRARANDMDSIGESE 1014
Score = 37 (18.1 bits), Expect = 6.1e-91, Sum P(3) = 6.1e-91
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 505 GEKKT-EDDEYKDAGEEATYY 524
GE+ + ED++ +D E+ YY
Sbjct: 68 GEEDSGEDEDEEDFEEDDDYY 88
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 553 (199.7 bits), Expect = 5.3e-90, Sum P(2) = 5.3e-90
Identities = 126/306 (41%), Positives = 183/306 (59%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+ YQ++G+ W+V ++ IL DEMGLGKT QTIALL YL+ + + GP+L++ PL
Sbjct: 39 RLRSYQLEGVNWLVQCFHGQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLILCPL 98
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLAR-RALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
S LSNW E E++AP + V Y G R R Q + S F+VLLTTYE +KD S L
Sbjct: 99 SVLSNWKEEMERFAPGLSCVTYTGDKEERARRQQDLRQESGFHVLLTTYEICLKDASFLK 158
Query: 664 KIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPS 723
W + +DE HR+KN L +TL+ F + R+LLTGTP+QN L EL++LL+ + P
Sbjct: 159 SFSWSVLAVDEAHRLKNQSSLLHRTLSEF-SVVFRLLLTGTPIQNSLQELYSLLSVVEPD 217
Query: 724 IFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEK 783
+F C EQ + F + +E + LH++LRPFLLRR+K +V ++LP+K
Sbjct: 218 LF--CR--EQVED--FVQCYQDIEKESKSA----SELHRLLRPFLLRRVKAQVATELPKK 267
Query: 784 VEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGEGGARALKNTIVQLRKLCNHPF 842
E +I MS LQK Y + IL+ D + + +T + L+N + QLRK +HP+
Sbjct: 268 TEVVIYHGMSALQKKYY-----KAILMKDLDAFENETAK--KVKLQNVLTQLRKCVDHPY 320
Query: 843 MFQNIE 848
+F +E
Sbjct: 321 LFDGVE 326
Score = 424 (154.3 bits), Expect = 5.3e-90, Sum P(2) = 5.3e-90
Identities = 90/200 (45%), Positives = 127/200 (63%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N + QLRK +HP++F +E + + +G++ + SGK LLDR+L
Sbjct: 305 LQNVLTQLRKCVDHPYLFDGVEPEPFE-VGEH--------LIEASGKLHLLDRLLAFLYS 355
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
HRVL+F QMT ++ IL+DY +R +SY R+DG+ + E+R ++ F + F+FLL
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGK--QPIFVFLL 413
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
STRAGG+G+NL AADTVI DSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 414 STRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 473
Query: 1007 LAAARYKLNMDEKVIQAGMF 1026
A KL + VI+ G F
Sbjct: 474 YRKAASKLQLTNMVIEGGHF 493
Score = 406 (148.0 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 86/190 (45%), Positives = 122/190 (64%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N + QLRK +HP++F +E + + +G++ + SGK LLDR+L
Sbjct: 305 LQNVLTQLRKCVDHPYLFDGVEPEPFE-VGEH--------LIEASGKLHLLDRLLAFLYS 355
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 243
HRVL+F QMT ++ IL+DY +R +SY R+DG+ + E+R ++ F + F+FLL
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGK--QPIFVFLL 413
Query: 244 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 303
STRAGG+G+NL AADTVI DSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 414 STRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 473
Query: 304 LAAARYKLNM 313
A KL +
Sbjct: 474 YRKAASKLQL 483
Score = 196 (74.1 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 53/146 (36%), Positives = 83/146 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L EL++LL+ + P +F C EQ + F + +E + LH++
Sbjct: 198 TPIQNSLQELYSLLSVVEPDLF--CR--EQVED--FVQCYQDIEKESKSA----SELHRL 247
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGEG 119
LRPFLLRR+K +V ++LP+K E +I MS LQK Y + IL+ D + + +T +
Sbjct: 248 LRPFLLRRVKAQVATELPKKTEVVIYHGMSALQKKYY-----KAILMKDLDAFENETAK- 301
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIE 145
L+N + QLRK +HP++F +E
Sbjct: 302 -KVKLQNVLTQLRKCVDHPYLFDGVE 326
Score = 56 (24.8 bits), Expect = 2.4e-50, Sum P(3) = 2.4e-50
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIK-CDMSGLQKLLYQHLHNRGI 808
L + L+ LL KK+ LP ++ + K + G ++L+ +HL RGI
Sbjct: 826 LEEGLKKILLAAKKKKASVHLP-RIGHATKGFNWYGTERLIRKHLATRGI 874
Score = 44 (20.5 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 632 ARRALQGRMKNSKFNVLL--TTYEFIIKDKSVLSKIQWKCMIIDEGH 676
AR G+ K+ K L+ T E I+ K+ SK+Q M+I+ GH
Sbjct: 447 ARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAA-SKLQLTNMVIEGGH 492
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 547 (197.6 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 125/305 (40%), Positives = 180/305 (59%)
Query: 546 LKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLS 605
L+ YQ++G+ W+ ++ IL DEMGLGKT QTIAL YL + + GP+L++ PLS
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 606 TLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDKSVLSK 664
LSNW E E++AP + V Y G R LQ +K S+F+VLLTTYE +KD S L
Sbjct: 108 VLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKS 167
Query: 665 IQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSI 724
W +++DE HR+KN L +TL+ F + +LLTGTP+QN L EL++LL+F+ P +
Sbjct: 168 FPWSVLVVDEAHRLKNQSSLLHKTLSEF-SVVFSLLLTGTPIQNSLQELYSLLSFVEPDL 226
Query: 725 FKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV 784
F EQ + F + +E E L+K+L+PFLLRR+K EV ++LP K
Sbjct: 227 FSK----EQVED--FVQRYQDIEKESESA----SELYKLLQPFLLRRVKAEVATELPRKT 276
Query: 785 EYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGEGGARALKNTIVQLRKLCNHPFM 843
E +I MS LQK Y + IL+ D + + +T + L+N + QLRK +HP++
Sbjct: 277 EVVIYHGMSALQKKYY-----KAILMKDLDAFENETAK--KVKLQNVLSQLRKCVDHPYL 329
Query: 844 FQNIE 848
F +E
Sbjct: 330 FDGVE 334
Score = 427 (155.4 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
Identities = 91/200 (45%), Positives = 127/200 (63%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N + QLRK +HP++F +E + + IG + + SGK LLD++L
Sbjct: 313 LQNVLSQLRKCVDHPYLFDGVEPEPFE-IGDH--------LIEASGKLHLLDKLLAFLYS 363
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F FLL
Sbjct: 364 KGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPIFTFLL 421
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
STRAGG+G+NL AADTVI FDSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 422 STRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 481
Query: 1007 LAAARYKLNMDEKVIQAGMF 1026
A KL + +I+ G F
Sbjct: 482 YRKAASKLQLTNTIIEGGHF 501
Score = 410 (149.4 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 88/190 (46%), Positives = 122/190 (64%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N + QLRK +HP++F +E + + IG + + SGK LLD++L
Sbjct: 313 LQNVLSQLRKCVDHPYLFDGVEPEPFE-IGDH--------LIEASGKLHLLDKLLAFLYS 363
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 243
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F FLL
Sbjct: 364 KGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPIFTFLL 421
Query: 244 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 303
STRAGG+G+NL AADTVI FDSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 422 STRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 481
Query: 304 LAAARYKLNM 313
A KL +
Sbjct: 482 YRKAASKLQL 491
Score = 333 (122.3 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 88/253 (34%), Positives = 137/253 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L EL++LL+F+ P +F EQ + F + +E E L+K+
Sbjct: 206 TPIQNSLQELYSLLSFVEPDLFSK----EQVED--FVQRYQDIEKESESA----SELYKL 255
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGEG 119
L+PFLLRR+K EV ++LP K E +I MS LQK Y + IL+ D + + +T +
Sbjct: 256 LQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYY-----KAILMKDLDAFENETAK- 309
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILP 179
L+N + QLRK +HP++F +E + + IG + + SGK LLD++L
Sbjct: 310 -KVKLQNVLSQLRKCVDHPYLFDGVEPEPFE-IGDH--------LIEASGKLHLLDKLLA 359
Query: 180 KFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYF 239
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F
Sbjct: 360 FLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQPIFTF 419
Query: 240 IFLLSTRAGGLGL 252
+ G+ L
Sbjct: 420 LLSTRAGGVGMNL 432
Score = 53 (23.7 bits), Expect = 8.5e-35, Sum P(2) = 8.5e-35
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIK-CDMSGLQKLLYQHLHNRGI 808
L + L+ L K++ LP ++ + K + G ++L+ +HL +RGI
Sbjct: 820 LEEALKKIFLAAKKRKASVHLP-RIGHATKGFNWYGTERLIRKHLASRGI 868
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 546 (197.3 bits), Expect = 1.6e-89, Sum P(2) = 1.6e-89
Identities = 125/306 (40%), Positives = 184/306 (60%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+ YQ++G+ W+V ++ IL DEMGLGKT QTIALL YL+ + + GP+LV+ PL
Sbjct: 39 RLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPL 98
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDKSVLS 663
S LSNW E E++AP + V Y G R LQ ++ S F+VLLTTYE +KD S L
Sbjct: 99 SVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHVLLTTYEICLKDASFLK 158
Query: 664 KIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPS 723
W + +DE HR+KN L +TL+ F ++ R+LLTGTP+QN L EL++LL + P
Sbjct: 159 SFSWSVLAVDEAHRLKNQSSLLHRTLSEF-SAVFRLLLTGTPIQNSLRELYSLLCVVEPD 217
Query: 724 IFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEK 783
+F C EQ + F + +E + LH++L+PFLLRR+K +V ++LP+K
Sbjct: 218 LF--CR--EQVED--FVQRYQDIEKESKSA----SELHRLLQPFLLRRVKAQVATELPKK 267
Query: 784 VEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGEGGARALKNTIVQLRKLCNHPF 842
E ++ MS LQK Y + IL+ D + + +T + L+N + QLRK +HP+
Sbjct: 268 TEVVVYHGMSALQKKYY-----KAILMKDLDAFENETAK--KVKLQNILTQLRKCVDHPY 320
Query: 843 MFQNIE 848
+F +E
Sbjct: 321 LFDGVE 326
Score = 427 (155.4 bits), Expect = 1.6e-89, Sum P(2) = 1.6e-89
Identities = 92/201 (45%), Positives = 129/201 (64%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N + QLRK +HP++F +E + + +G++ + SGK LLDR+L
Sbjct: 305 LQNILTQLRKCVDHPYLFDGVEPEPFE-VGEH--------LIEASGKLHLLDRLLAFLYS 355
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF-NEPESKYFIFL 945
HRVL+F QMT ++ IL+DY +R +SY R+DG+ + E+R ++ F N+P F+FL
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP---IFVFL 412
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
LSTRAGG+G+NL AADTVI DSD+NP DLQA RAHRIGQ V+V+RLI ++VEE
Sbjct: 413 LSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEI 472
Query: 1006 ILAAARYKLNMDEKVIQAGMF 1026
+ A KL + VI+ G F
Sbjct: 473 VYRKAASKLQLTNMVIEGGHF 493
Score = 409 (149.0 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 88/191 (46%), Positives = 124/191 (64%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N + QLRK +HP++F +E + + +G++ + SGK LLDR+L
Sbjct: 305 LQNILTQLRKCVDHPYLFDGVEPEPFE-VGEH--------LIEASGKLHLLDRLLAFLYS 355
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF-NEPESKYFIFL 242
HRVL+F QMT ++ IL+DY +R +SY R+DG+ + E+R ++ F N+P F+FL
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP---IFVFL 412
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
LSTRAGG+G+NL AADTVI DSD+NP DLQA RAHRIGQ V+V+RLI ++VEE
Sbjct: 413 LSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEI 472
Query: 303 ILAAARYKLNM 313
+ A KL +
Sbjct: 473 VYRKAASKLQL 483
Score = 319 (117.4 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 83/236 (35%), Positives = 134/236 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L EL++LL + P +F C EQ + F + +E + LH++
Sbjct: 198 TPIQNSLRELYSLLCVVEPDLF--CR--EQVED--FVQRYQDIEKESKSA----SELHRL 247
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGEG 119
L+PFLLRR+K +V ++LP+K E ++ MS LQK Y + IL+ D + + +T +
Sbjct: 248 LQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYY-----KAILMKDLDAFENETAK- 301
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILP 179
L+N + QLRK +HP++F +E + + +G++ + SGK LLDR+L
Sbjct: 302 -KVKLQNILTQLRKCVDHPYLFDGVEPEPFE-VGEH--------LIEASGKLHLLDRLLA 351
Query: 180 KFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF-NEP 234
HRVL+F QMT ++ IL+DY +R +SY R+DG+ + E+R ++ F N+P
Sbjct: 352 FLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP 407
Score = 52 (23.4 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIK-CDMSGLQKLLYQHLHNRGI 808
L + L+ L KK+ LP ++ + K + G ++L+ +HL RGI
Sbjct: 825 LEEGLKKIFLAAKKKKASVHLP-RIGHATKGFNWYGTERLIRKHLATRGI 873
Score = 44 (20.5 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 632 ARRALQGRMKNSKFNVLL--TTYEFIIKDKSVLSKIQWKCMIIDEGH 676
AR G+ K+ K L+ T E I+ K+ SK+Q M+I+ GH
Sbjct: 447 ARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAA-SKLQLTNMVIEGGH 492
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 548 (198.0 bits), Expect = 3.1e-89, Sum P(2) = 3.1e-89
Identities = 124/305 (40%), Positives = 180/305 (59%)
Query: 546 LKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLS 605
L+ YQ++G+ W+ ++ IL DEMGLGKT QTIAL YL + + GP+L++ PLS
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105
Query: 606 TLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDKSVLSK 664
LSNW E +++AP + V Y G R LQ +K S+F+VLLTTYE +KD S L
Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKS 165
Query: 665 IQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSI 724
W +++DE HR+KN L +TL+ F + +LLTGTP+QN L EL++LL+F+ P +
Sbjct: 166 FPWSVLVVDEAHRLKNQSSLLHKTLSEF-SVVFSLLLTGTPIQNSLQELYSLLSFVEPDL 224
Query: 725 FKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV 784
F E+ F + +E E LHK+L+PFLLRR+K EV ++LP+K
Sbjct: 225 FSK----EEV--GDFIQRYQDIEKESESA----SELHKLLQPFLLRRVKAEVATELPKKT 274
Query: 785 EYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGEGGARALKNTIVQLRKLCNHPFM 843
E +I MS LQK Y + IL+ D + + +T + L+N + QLRK +HP++
Sbjct: 275 EVVIYHGMSALQKKYY-----KAILMKDLDAFENETAK--KVKLQNILSQLRKCVDHPYL 327
Query: 844 FQNIE 848
F +E
Sbjct: 328 FDGVE 332
Score = 422 (153.6 bits), Expect = 3.1e-89, Sum P(2) = 3.1e-89
Identities = 90/200 (45%), Positives = 127/200 (63%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N + QLRK +HP++F +E + + +G + T SGK LLD++L
Sbjct: 311 LQNILSQLRKCVDHPYLFDGVEPEPFE-VGDHLT--------EASGKLHLLDKLLAFLYS 361
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F+FLL
Sbjct: 362 GGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPIFVFLL 419
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
STRAGG+G+NL AADTVI DSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 420 STRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 479
Query: 1007 LAAARYKLNMDEKVIQAGMF 1026
A KL + +I+ G F
Sbjct: 480 YRKAASKLQLTNMIIEGGHF 499
Score = 405 (147.6 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 87/190 (45%), Positives = 122/190 (64%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N + QLRK +HP++F +E + + +G + T SGK LLD++L
Sbjct: 311 LQNILSQLRKCVDHPYLFDGVEPEPFE-VGDHLT--------EASGKLHLLDKLLAFLYS 361
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 243
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F+FLL
Sbjct: 362 GGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPIFVFLL 419
Query: 244 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 303
STRAGG+G+NL AADTVI DSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 420 STRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 479
Query: 304 LAAARYKLNM 313
A KL +
Sbjct: 480 YRKAASKLQL 489
Score = 202 (76.2 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 54/146 (36%), Positives = 82/146 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L EL++LL+F+ P +F E+ F + +E E LHK+
Sbjct: 204 TPIQNSLQELYSLLSFVEPDLFSK----EEV--GDFIQRYQDIEKESESA----SELHKL 253
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD-GSEKGKTGEG 119
L+PFLLRR+K EV ++LP+K E +I MS LQK Y + IL+ D + + +T +
Sbjct: 254 LQPFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYY-----KAILMKDLDAFENETAK- 307
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIE 145
L+N + QLRK +HP++F +E
Sbjct: 308 -KVKLQNILSQLRKCVDHPYLFDGVE 332
Score = 50 (22.7 bits), Expect = 2.9e-50, Sum P(3) = 2.9e-50
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIK-CDMSGLQKLLYQHLHNRGI 808
L + L+ L KK+ LP ++ + K + G ++L+ +HL RGI
Sbjct: 820 LEEGLKKIFLAAKKKKASVHLP-RIGHATKGFNWYGTERLIRKHLAARGI 868
Score = 45 (20.9 bits), Expect = 9.4e-12, Sum P(3) = 9.4e-12
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 632 ARRALQGRMKNSKFNVLL--TTYEFIIKDKSVLSKIQWKCMIIDEGH 676
AR G+ K+ K L+ T E I+ K+ SK+Q MII+ GH
Sbjct: 453 ARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAA-SKLQLTNMIIEGGH 498
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 521 (188.5 bits), Expect = 1.5e-88, Sum P(2) = 1.5e-88
Identities = 111/276 (40%), Positives = 176/276 (63%)
Query: 747 ELNEEETILIIRRLHKVLRPFLLRRLKKEV-ESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
++N+EE I RLH++L P LLRRLKK+V + ++P K E I++ DMS QK +Y+
Sbjct: 415 DINKEEQI---SRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYK---- 467
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 865
++T+ + T + A+ + N +++LR++C+HP++ + E ++ + + T
Sbjct: 468 --AVITNNYQV-LTKKRDAK-ISNVLMKLRQVCSHPYLLPDFEPRF-EDANEAFT----- 517
Query: 866 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 925
+ SGK +LLD+++ K KE HRVL++ Q + +LEDYF +++++Y R+DG
Sbjct: 518 KLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGP 577
Query: 926 DRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRI 985
+R + +FN S F FLLSTRAGG+G+NL ADTVII+DSDWNPH DLQA R HR+
Sbjct: 578 ERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRL 637
Query: 986 GQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVI 1021
GQ N+V + RLI +VEER++ + K+ ++ V+
Sbjct: 638 GQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVV 673
Score = 516 (186.7 bits), Expect = 8.6e-46, P = 8.6e-46
Identities = 110/272 (40%), Positives = 174/272 (63%)
Query: 44 ELNEEETILIIRRLHKVLRPFLLRRLKKEV-ESQLPEKVEYIIKCDMSGLQKLLYQHLHN 102
++N+EE I RLH++L P LLRRLKK+V + ++P K E I++ DMS QK +Y+
Sbjct: 415 DINKEEQI---SRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYK---- 467
Query: 103 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 162
++T+ + T + A+ + N +++LR++C+HP++ + E ++ + + T
Sbjct: 468 --AVITNNYQV-LTKKRDAK-ISNVLMKLRQVCSHPYLLPDFEPRF-EDANEAFT----- 517
Query: 163 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 222
+ SGK +LLD+++ K KE HRVL++ Q + +LEDYF +++++Y R+DG
Sbjct: 518 KLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGP 577
Query: 223 DRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRI 282
+R + +FN S F FLLSTRAGG+G+NL ADTVII+DSDWNPH DLQA R HR+
Sbjct: 578 ERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRL 637
Query: 283 GQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
GQ N+V + RLI +VEER++ + K+ ++
Sbjct: 638 GQTNKVMIYRLIHKGTVEERMMEITKNKMLLE 669
Score = 453 (164.5 bits), Expect = 1.5e-88, Sum P(2) = 1.5e-88
Identities = 102/199 (51%), Positives = 127/199 (63%)
Query: 542 VNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVI 601
+ G L YQ++GL ++ ++ N ILADEMGLGKT+Q+IA L L E+ NL P+LV+
Sbjct: 221 LTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEE--NLSPHLVV 278
Query: 602 VPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL--------QGRMKNSKFNVLLTTYE 653
PLST+ NW EF WAP NVV Y G AR + +GR SKF+VLLTTYE
Sbjct: 279 APLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGR--KSKFDVLLTTYE 336
Query: 654 FIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPEL 713
+ SVLS I+W CMIIDEGHR+KN KL +L+ F S H VLLTGTPLQN L EL
Sbjct: 337 MVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQF-TSKHIVLLTGTPLQNNLNEL 395
Query: 714 WALLNFLLPSIFKSCSTFE 732
+AL++FL F S F+
Sbjct: 396 FALMHFLDADKFGSLEKFQ 414
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 887 (317.3 bits), Expect = 4.2e-88, P = 4.2e-88
Identities = 209/549 (38%), Positives = 317/549 (57%)
Query: 510 EDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGIL 569
E +E + T Y + + K+ +Q S + G+L+++Q+ G+ WM L++ N NGIL
Sbjct: 339 EREESALSPSRGTNYGNSRPKYRKLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGIL 398
Query: 570 ADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGS 629
ADEMGLGKTVQT+A L+YL + GP+LV+VPLST+ W WA N ++Y G+
Sbjct: 399 ADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGN 458
Query: 630 PLARRALQGRMKNSKFNVLLTT---YEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLT 686
+R+ + ++ +F V T + ++ + K + I + + +L
Sbjct: 459 TTSRQVI----RDYEFYVDGTQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAIDEAHRLK 514
Query: 687 QTLNTFYNS------SHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFA 740
+ ++ Y + S+R+L+TGTPLQN + EL AL++FL+P F+ + N
Sbjct: 515 NSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLMPGKFE----IREEIN---- 566
Query: 741 TTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLY 800
+E +EE IR L + L+P++LRRLKK+VE LP K E I++ ++S LQ Y
Sbjct: 567 -----LEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWY 621
Query: 801 QHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHI---GQ 857
+++ R + S G +L N +V+L+K NHP++F +EE + Q I G+
Sbjct: 622 KNILTRNYRVLTQS----ISSGSQISLLNIVVELKKASNHPYLFDGVEESWMQKINSQGR 677
Query: 858 NNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLR 917
+ V+ G + SGK LLD++L + + HRVL+F QM +++ IL DY R + + R
Sbjct: 678 RDEVLKG--LIMNSGKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQR 735
Query: 918 LDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQ 977
LDGT + R + FN P S F+FLLSTRAGGLG+NL ADTVIIFDSDWNP DLQ
Sbjct: 736 LDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQ 795
Query: 978 AQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFD-QKSTGSERH 1036
A RAHRIGQKN V V RL++ +++EE +L AR K+ ++ +I G+ D QK++ +++
Sbjct: 796 AMARAHRIGQKNHVMVYRLLSKDTIEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKF 855
Query: 1037 --EFLQTIL 1043
E L IL
Sbjct: 856 SAEELSAIL 864
Score = 610 (219.8 bits), Expect = 6.9e-56, P = 6.9e-56
Identities = 137/317 (43%), Positives = 193/317 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL AL++FL+P F+ + N +E +EE IR L +
Sbjct: 538 TPLQNNIRELAALVDFLMPGKFE----IREEIN---------LEAPDEEQEAYIRSLQEH 584
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+P++LRRLKK+VE LP K E I++ ++S LQ Y+++ R + S G
Sbjct: 585 LQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYRVLTQS----ISSGS 640
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHI---GQNNTVVSGPDIYRTSGKFELLDRI 177
+L N +V+L+K NHP++F +EE + Q I G+ + V+ G + SGK LLD++
Sbjct: 641 QISLLNIVVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKG--LIMNSGKMVLLDKL 698
Query: 178 LPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESK 237
L + + HRVL+F QM +++ IL DY R + + RLDGT + R + FN P S
Sbjct: 699 LSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSP 758
Query: 238 YFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVN 297
F+FLLSTRAGGLG+NL ADTVIIFDSDWNP DLQA RAHRIGQKN V V RL++ +
Sbjct: 759 DFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKD 818
Query: 298 SVEERILAAARYKLNMD 314
++EE +L AR K+ ++
Sbjct: 819 TIEEDVLERARRKMILE 835
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 544 (196.6 bits), Expect = 6.1e-88, Sum P(2) = 6.1e-88
Identities = 124/304 (40%), Positives = 177/304 (58%)
Query: 546 LKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLS 605
L+ YQ++G+ W+ ++ IL DEMGLGKT QTIAL YL + + GP+L++ PLS
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 606 TLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDKSVLSK 664
LSNW E E++AP + V Y G R LQ +K S+F+VLLTTYE +KD S L
Sbjct: 108 VLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKS 167
Query: 665 IQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSI 724
W +++DE HR+KN L +TL+ F + +LLTGTP+QN L EL++LL+F+ P +
Sbjct: 168 FPWSVLVVDEAHRLKNQSSLLHKTLSEF-SVVFSLLLTGTPIQNSLQELYSLLSFVEPDL 226
Query: 725 FKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV 784
F EQ + F + +E E L+K+L+PFLLRR+K EV ++LP K
Sbjct: 227 FSK----EQVED--FVQRYQDIEKESESA----SELYKLLQPFLLRRVKAEVATELPRKT 276
Query: 785 EYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
E +I MS LQK Y + IL+ D + + L+N + QLRK +HP++F
Sbjct: 277 EVVIYHGMSALQKKYY-----KAILMKD-LDAFENEMAKKVKLQNVLSQLRKCVDHPYLF 330
Query: 845 QNIE 848
+E
Sbjct: 331 DGVE 334
Score = 414 (150.8 bits), Expect = 6.1e-88, Sum P(2) = 6.1e-88
Identities = 90/200 (45%), Positives = 126/200 (63%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N + QLRK +HP++F +E + + IG + + SGK LLD++L
Sbjct: 313 LQNVLSQLRKCVDHPYLFDGVEPEPFE-IGDH--------LIEASGKLHLLDKLLAFLYS 363
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F FL
Sbjct: 364 KGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPIFTFL- 420
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
STRAGG+G+NL AADTVI FDSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 421 STRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 480
Query: 1007 LAAARYKLNMDEKVIQAGMF 1026
A KL + +I+ G F
Sbjct: 481 YRKAASKLQLTNTIIEGGHF 500
Score = 397 (144.8 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 87/190 (45%), Positives = 121/190 (63%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N + QLRK +HP++F +E + + IG + + SGK LLD++L
Sbjct: 313 LQNVLSQLRKCVDHPYLFDGVEPEPFE-IGDH--------LIEASGKLHLLDKLLAFLYS 363
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 243
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F FL
Sbjct: 364 KGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPIFTFL- 420
Query: 244 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 303
STRAGG+G+NL AADTVI FDSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 421 STRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 480
Query: 304 LAAARYKLNM 313
A KL +
Sbjct: 481 YRKAASKLQL 490
Score = 328 (120.5 bits), Expect = 8.5e-26, Sum P(2) = 8.5e-26
Identities = 84/233 (36%), Positives = 129/233 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L EL++LL+F+ P +F EQ + F + +E E L+K+
Sbjct: 206 TPIQNSLQELYSLLSFVEPDLFSK----EQVED--FVQRYQDIEKESESA----SELYKL 255
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K EV ++LP K E +I MS LQK Y + IL+ D + +
Sbjct: 256 LQPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYY-----KAILMKD-LDAFENEMAK 309
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L+N + QLRK +HP++F +E + + IG + + SGK LLD++L
Sbjct: 310 KVKLQNVLSQLRKCVDHPYLFDGVEPEPFE-IGDH--------LIEASGKLHLLDKLLAF 360
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F +
Sbjct: 361 LYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQ 413
Score = 53 (23.7 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIK-CDMSGLQKLLYQHLHNRGI 808
L + L+ L K++ LP ++ + K + G ++L+ +HL +RGI
Sbjct: 819 LEEALKKIFLAAKKRKASVHLP-RIGHATKGFNWYGTERLIRKHLASRGI 867
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 863 (308.9 bits), Expect = 9.1e-87, Sum P(2) = 9.1e-87
Identities = 201/500 (40%), Positives = 299/500 (59%)
Query: 533 KVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKK 592
K+ Q S + G L++YQ++GL W+V + NN N ILADEMGLGKT+QTI+ L+YL ++
Sbjct: 742 KLDTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNEQ 801
Query: 593 KNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTY 652
GP+LV+VPLST+ NW EF KWAP+ NV+ Y G+ G+ ++ ++ Y
Sbjct: 802 DIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGT--------GQSRD-----IIRLY 848
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTF-YNSSHRVLLTGTPLQNKLP 711
EF ++ K+ + ++ +K+ + T + +HR+ + + L L
Sbjct: 849 EFYTTNRLGKKKLNFNVLLTTYDFILKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVL- 907
Query: 712 ELWALLNFLLPSIFKSCSTFEQ-W----FNAPFATTGEKVELNEEETILI----IRRLHK 762
+L+ N LL + ++ ++ W F P T K + ++ + L I +LH
Sbjct: 908 KLYNTTNRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLK-DFQDQYSDLKENDQIAQLHS 966
Query: 763 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 822
VL+P LLRR+KK+VE LP K E I++ D+S +QK Y+ + LT ++ G+G
Sbjct: 967 VLKPHLLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYKWI------LTKNFQELNKGKG 1020
Query: 823 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILP 882
L N + +L+K CNHP+++QN ++ C+ +G + + S + R SGK LLD++L
Sbjct: 1021 EKTTLLNIMTELKKTCNHPYLYQNARDE-CE-LGAKDLLDS---MIRASGKLVLLDKLLI 1075
Query: 883 KFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYF 942
+ KET HRVL+F QM +++ IL DY R F + RLDG+ E R + + +FN +S F
Sbjct: 1076 RLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAMDRFNAVDSPDF 1135
Query: 943 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 1002
FLLST+AGGLG+NL ADTVIIFDSDWNP DLQA+ RAHRIGQKN V + RL++ +SV
Sbjct: 1136 CFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSKSSV 1195
Query: 1003 EERILAAARYKLNMDEKVIQ 1022
EE IL A+ K+ +D VIQ
Sbjct: 1196 EEDILERAKQKMVLDHLVIQ 1215
Score = 614 (221.2 bits), Expect = 4.9e-56, P = 4.9e-56
Identities = 128/277 (46%), Positives = 179/277 (64%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I +LH VL+P LLRR+KK+VE LP K E I++ D+S +QK Y+ + LT ++
Sbjct: 961 IAQLHSVLKPHLLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYKWI------LTKNFQE 1014
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G+G L N + +L+K CNHP+++QN ++ C+ +G + + S + R SGK L
Sbjct: 1015 LNKGKGEKTTLLNIMTELKKTCNHPYLYQNARDE-CE-LGAKDLLDS---MIRASGKLVL 1069
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
LD++L + KET HRVL+F QM +++ IL DY R F + RLDG+ E R + + +FN
Sbjct: 1070 LDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAMDRFNA 1129
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
+S F FLLST+AGGLG+NL ADTVIIFDSDWNP DLQA+ RAHRIGQKN V + RL
Sbjct: 1130 VDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRL 1189
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLN 330
++ +SVEE IL A+ K+ +D ++T K N
Sbjct: 1190 VSKSSVEEDILERAKQKMVLDHLVIQTMEKSQTAKSN 1226
Score = 194 (73.4 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 44/98 (44%), Positives = 60/98 (61%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW LLNFL+P+ F S F+ ++ +L E + I +LH V
Sbjct: 921 TPLQNSLKELWNLLNFLMPNKFTSLKDFQDQYS----------DLKENDQIA---QLHSV 967
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 98
L+P LLRR+KK+VE LP K E I++ D+S +QK Y+
Sbjct: 968 LKPHLLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYK 1005
Score = 49 (22.3 bits), Expect = 9.1e-87, Sum P(2) = 9.1e-87
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 89 MSGLQKLLYQHLHNRGILLTDGSEKGKT 116
M GL L++ ++N ++L D GKT
Sbjct: 760 MEGLNWLVHSWMNNTNVILADEMGLGKT 787
Score = 38 (18.4 bits), Expect = 1.3e-85, Sum P(2) = 1.3e-85
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 443 RITVKETNSDNKLRGEDAPPAKQIKE 468
RIT E++S+ D P K+ K+
Sbjct: 354 RITYSESDSEESESDSDYEPNKKKKK 379
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 852 (305.0 bits), Expect = 6.8e-85, Sum P(2) = 6.8e-85
Identities = 223/631 (35%), Positives = 330/631 (52%)
Query: 533 KVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKK 592
K+ EQ ++ G L++YQ++GL ++V+ + N+ N ILADEMGLGKTVQ++++L +L +
Sbjct: 612 KLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQ 671
Query: 593 KNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTY 652
+ GP+LV+VPLSTL+NW EF KW P N++ Y G+ +R Q Y
Sbjct: 672 QIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQ-------------QY 718
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHC-KLTQTLNTFYNSSHRVLLTGTPLQNKLP 711
EF +K V I++ ++ +K+ + + + +HR+ + L L
Sbjct: 719 EFY-NEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALL 777
Query: 712 ELWALLNFLLPSIFKSCSTFEQW----FNAP--FATTGEKVE-------LNEEETILIIR 758
E L+ S E W F P F E VE NE E +
Sbjct: 778 EFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESE----LA 833
Query: 759 RLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGK 818
LH LRP +LRR+ K+VE LP K+E I++ +MS LQK Y+ + R + K
Sbjct: 834 NLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF-----HDLNK 888
Query: 819 TGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLD 878
G +L N +V+L+K CNHPF+F++ + Y I N+ + I +SGK +LD
Sbjct: 889 GVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKL---DKIILSSGKLVILD 945
Query: 879 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 938
++L + +ETKHRVL+F QM +++ IL +Y R F + RLDG+TK+E R + + FN P
Sbjct: 946 KLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPA 1005
Query: 939 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 998
S F FLLSTRAGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQ+ V + R +T
Sbjct: 1006 SDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVT 1065
Query: 999 VNSVEERILAAARYKLNMDEKVIQA----GMFDQKST--GS--ERHEFLQTILHQXXXXX 1050
SVEE IL A+ K+ +D VIQ G +++ T GS +++E L IL
Sbjct: 1066 SKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNE-LSAILRFGAEEL 1124
Query: 1051 XXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGETKPRLVEIKELPDWM-VKDDDEVE 1109
+ +L++ DE+ + E+ ET+ L+ ++ ++ +DD
Sbjct: 1125 FKEDKNDEESKKRLLSMDIDEILERAEQVEEKHTDETEHELLGAFKVANFCNAEDDGSFW 1184
Query: 1110 NSMYXXXXXXXXXXALMGRGSRQRKQVDYTD 1140
+ AL R +R K Y D
Sbjct: 1185 SRWIKPDSVVTAEEALAPRAARNTKS--YVD 1213
Score = 593 (213.8 bits), Expect = 7.9e-54, P = 7.9e-54
Identities = 128/284 (45%), Positives = 175/284 (61%)
Query: 46 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 105
NE E + LH LRP +LRR+ K+VE LP K+E I++ +MS LQK Y+ + R
Sbjct: 828 NESE----LANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 883
Query: 106 LLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY 165
+ K G +L N +V+L+K CNHPF+F++ + Y I N+ + I
Sbjct: 884 -----HDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKL---DKII 935
Query: 166 RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG 225
+SGK +LD++L + +ETKHRVL+F QM +++ IL +Y R F + RLDG+TK+E R
Sbjct: 936 LSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQ 995
Query: 226 ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQK 285
+ + FN P S F FLLSTRAGGLG+NL ADTV+IFDSDWNP DLQA RAHRIGQ+
Sbjct: 996 QAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQ 1055
Query: 286 NEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT-ARTQK 328
V + R +T SVEE IL A+ K+ +D + N R +K
Sbjct: 1056 EVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEK 1099
Score = 242 (90.2 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 61/157 (38%), Positives = 85/157 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTF-EQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TPLQN + ELWALL+FL P FK+ F E + N NE E + LH
Sbjct: 790 TPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLS--------SFNESE----LANLHL 837
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
LRP +LRR+ K+VE LP K+E I++ +MS LQK Y+ + R + K G
Sbjct: 838 ELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF-----HDLNKGVRG 892
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNN 156
+L N +V+L+K CNHPF+F++ + Y I N+
Sbjct: 893 NQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNS 929
Score = 40 (19.1 bits), Expect = 6.8e-85, Sum P(2) = 6.8e-85
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 76 QLPEKVEYII-----KCDMSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+L E+ E++I + GL L+ L++ ++L D GKT
Sbjct: 612 KLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKT 657
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 543 (196.2 bits), Expect = 1.1e-83, Sum P(2) = 1.1e-83
Identities = 122/302 (40%), Positives = 179/302 (59%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+L+ YQ++G+ W+ ++ IL DEMGLGKT QTIAL YL + + GP+L++ PL
Sbjct: 47 RLRSYQLEGVNWLARCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPL 106
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDKSVLS 663
S LSNW E E++AP + V Y G R LQ +K S+F+VLLTTYE +KD S L
Sbjct: 107 SVLSNWTEEMERFAPGLSCVMYAGDKEERARLQQDLKQESRFHVLLTTYEICLKDSSFLK 166
Query: 664 KIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPS 723
W +++DE HR+KN + L +TL F + +LLTGTP+QN L EL++LL+F+ P
Sbjct: 167 SFPWSVLVVDEAHRLKNQNSLLHKTLLEF-SVVFSLLLTGTPIQNSLQELYSLLSFVEPD 225
Query: 724 IFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEK 783
+F EQ F + +E + LHK+L+PFLLRR+K EV ++LP+K
Sbjct: 226 LFPK----EQV--GDFVQRYQDIEKESDSA----SELHKLLQPFLLRRVKAEVATELPKK 275
Query: 784 VEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFM 843
E ++ MS LQK Y+ + + + + SE K + L+N + QLRK +HP++
Sbjct: 276 TEVVLYHGMSALQKKYYKAILMKDLDAFE-SEMAKKVK-----LQNVLSQLRKCVDHPYL 329
Query: 844 FQ 845
F+
Sbjct: 330 FE 331
Score = 375 (137.1 bits), Expect = 1.1e-83, Sum P(2) = 1.1e-83
Identities = 85/200 (42%), Positives = 121/200 (60%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N + QLRK +HP++F+ + + T + ++ S F L R
Sbjct: 313 LQNVLSQLRKCVDHPYLFEGETVPFFLTLLFMTTPLKNLELAALS--FLFLAR------- 363
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F+FLL
Sbjct: 364 -GHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPVFVFLL 420
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
STRAGG+G+NL AADTVI DSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 421 STRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 480
Query: 1007 LAAARYKLNMDEKVIQAGMF 1026
A KL + +I+ G F
Sbjct: 481 YRKAASKLQLTNAIIEGGHF 500
Score = 358 (131.1 bits), Expect = 6.0e-28, Sum P(3) = 6.0e-28
Identities = 82/190 (43%), Positives = 116/190 (61%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N + QLRK +HP++F+ + + T + ++ S F L R
Sbjct: 313 LQNVLSQLRKCVDHPYLFEGETVPFFLTLLFMTTPLKNLELAALS--FLFLAR------- 363
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 243
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F+FLL
Sbjct: 364 -GHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQ--QPVFVFLL 420
Query: 244 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 303
STRAGG+G+NL AADTVI DSD+NP DLQA RAHRIGQ V+V+RLI ++VEE +
Sbjct: 421 STRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIV 480
Query: 304 LAAARYKLNM 313
A KL +
Sbjct: 481 YRKAASKLQL 490
Score = 285 (105.4 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 81/252 (32%), Positives = 130/252 (51%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L EL++LL+F+ P +F EQ F + +E + LHK+
Sbjct: 206 TPIQNSLQELYSLLSFVEPDLFPK----EQV--GDFVQRYQDIEKESDSA----SELHKL 255
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K EV ++LP+K E ++ MS LQK Y+ + + + + SE K +
Sbjct: 256 LQPFLLRRVKAEVATELPKKTEVVLYHGMSALQKKYYKAILMKDLDAFE-SEMAKKVK-- 312
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L+N + QLRK +HP++F+ + + T + ++ S F L R
Sbjct: 313 ---LQNVLSQLRKCVDHPYLFEGETVPFFLTLLFMTTPLKNLELAALS--FLFLAR---- 363
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
HRVL+F QMTQ++ IL+DY +R +SY R+DG+ + E+R ++ F + F+
Sbjct: 364 ----GHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPVFVFL 419
Query: 241 FLLSTRAGGLGL 252
G+ L
Sbjct: 420 LSTRAGGVGMNL 431
Score = 48 (22.0 bits), Expect = 6.0e-28, Sum P(3) = 6.0e-28
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKC-DMSGLQKLLYQHLHNRGI 808
L + L+ L KK+ LP ++ + K + G ++L+ +HL +GI
Sbjct: 822 LEEGLKKIYLAAKKKKASVHLP-RIGHATKAFNWYGTERLIRKHLAAKGI 870
Score = 40 (19.1 bits), Expect = 6.0e-28, Sum P(3) = 6.0e-28
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 631 LARRALQGRMKNSKFNVLLTTY-EFIIKDKSVLS 663
L + +GR+ +K NVLL E K K +LS
Sbjct: 604 LEKTTQEGRLLRNKGNVLLPGLSEESTKRKRILS 637
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 796 (285.3 bits), Expect = 4.6e-81, Sum P(2) = 4.6e-81
Identities = 211/596 (35%), Positives = 312/596 (52%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 708 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 767
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLAR------------RALQGRMKNSKFNVLLTT 651
LST+ NW EFE WAP VV Y G +R A++G K SK +
Sbjct: 768 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKPSKMKKEASV 827
Query: 652 YEFIIKDKSVLSKIQWKCM-IIDEGHRMKNHHCKLTQTLNTFY---NS---SHRVLLTGT 704
++ L I + ID + + +L + F+ N+ H++LLTGT
Sbjct: 828 KFHVLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRILNNYPLQHKLLLTGT 887
Query: 705 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 764
PLQN L EL+ LLNFL P F + F + F A A E++ I++LH +L
Sbjct: 888 PLQNNLEELFHLLNFLTPERFSNLEGFLEEF-ADIA--------KEDQ----IKKLHDML 934
Query: 765 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 824
P +LRRLK +V +P K E I++ ++S +QK Y+ +LT E T GG
Sbjct: 935 GPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYK------FILTRNFEALNTRGGGN 988
Query: 825 R-ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 883
+ +L N ++ L+K CNHP++F + + N + G + ++SGK LL ++L K
Sbjct: 989 QVSLLNVVMDLKKCCNHPYLFPAAAMEAAK---MPNGMYEGGGLTKSSGKLLLLQKMLRK 1045
Query: 884 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 943
KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN P + F+
Sbjct: 1046 LKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAPQFV 1105
Query: 944 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 1003
FLLSTRAGGLG+NL ADTV+I+DSDWNPH D+QA RAHRIGQ +V + R +T SVE
Sbjct: 1106 FLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVE 1165
Query: 1004 ERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXXXXXXTVNQ 1063
ERI A+ K+ + V++ G+ + TGS + L IL Q
Sbjct: 1166 ERITQVAKKKMMLTHLVVRPGLGSK--TGSMSKQELDDILKFGTEELFKDEGEGENKEGQ 1223
Query: 1064 ---LIARTEDELT---LFQKMDA-ERRKGETKPRLVEIKELPDWMVKDDDEVENSM 1112
+ +D+ L + DA + + ++ + ++ ++VKD++E E +
Sbjct: 1224 EDSSVIHYDDKAIDRLLDRNQDATDDTELQSMNEYLSSFKVAQYVVKDEEEAEEEV 1279
Score = 548 (198.0 bits), Expect = 1.2e-49, Sum P(2) = 1.2e-49
Identities = 136/398 (34%), Positives = 212/398 (53%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
PLQ+KL L L +F + T E++ N E ++ +E+ I ++LH
Sbjct: 877 PLQHKLLLTGTPLQNNLEELFHLLNFLTPERFSNLE-GFLEEFADIAKEDQI---KKLHD 932
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+L P +LRRLK +V +P K E I++ ++S +QK Y+ +LT E T G
Sbjct: 933 MLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYK------FILTRNFEALNTRGG 986
Query: 120 GAR-ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRIL 178
G + +L N ++ L+K CNHP++F + + N + G + ++SGK LL ++L
Sbjct: 987 GNQVSLLNVVMDLKKCCNHPYLFPAAAMEAAK---MPNGMYEGGGLTKSSGKLLLLQKML 1043
Query: 179 PKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKY 238
K KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN P +
Sbjct: 1044 RKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAPQ 1103
Query: 239 FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNS 298
F+FLLSTRAGGLG+NL ADTV+I+DSDWNPH D+QA RAHRIGQ +V + R +T S
Sbjct: 1104 FVFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKAS 1163
Query: 299 VEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXXXXXXX 354
VEERI A+ K+ + ++T ++K I+ +
Sbjct: 1164 VEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEGEGENKEGQ 1223
Query: 355 XXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D L +EY+S+
Sbjct: 1224 EDSSVIHYDDKAIDRLLDRNQDATDDTELQSMNEYLSS 1261
Score = 153 (58.9 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 40/103 (38%), Positives = 58/103 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 887 TPLQNNLEELFHLLNFLTPERFSNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 933
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R
Sbjct: 934 LGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTR 976
Score = 63 (27.2 bits), Expect = 4.6e-81, Sum P(2) = 4.6e-81
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1314 LGKGKRIRKQVNYNDGSQEDRDW 1336
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 194/522 (37%), Positives = 298/522 (57%)
Query: 542 VNGKLKEYQIKGLEWMVSLYNNNLNGILA-DEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
V LK +Q++G+ W++ Y +N +L D+MGLGKT+Q I+ L+YL ++ GP+LV
Sbjct: 47 VTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLV 106
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRM-----KNSK-----FNVLLT 650
+ PLS WV E ++ P+ V+ Y G R ++ M K+SK F+VLLT
Sbjct: 107 LCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLT 166
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
TY+ + D+ LS+I W+ IIDE R+KN + L L + R+L+TGTP+QN L
Sbjct: 167 TYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNL 226
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVE----LNEEETILIIRRLHKVLRP 766
ELWAL++F +P +F T +Q+ +A F TG+ + N++ET + L +L
Sbjct: 227 TELWALMHFCMPLVF---GTLDQFLSA-FKETGDGLSGLDVSNDKETY---KSLKFILGA 279
Query: 767 FLLRRLKKE-VESQ---LPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 822
F+LRR K +ES LP E + + LQK +Y + + + G + +G
Sbjct: 280 FMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKEL---PGLLELSSGGS 336
Query: 823 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILP 882
+L+N ++QLRK C+HP++F IE + + G + + SGK +LD++L
Sbjct: 337 NHTSLQNIVIQLRKACSHPYLFPGIEPEPFEE---------GEHLVQASGKLLVLDQLLK 387
Query: 883 KFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN------- 935
+ ++ HRVL+F QMT + IL+D+ R +SY RLDG+ ++E+R ++ F+
Sbjct: 388 RLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGL 447
Query: 936 EPE---SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVR 992
+ E S F+F++STRAGG+GLNL AADTVI ++ DWNP D QA RAHRIGQ + V
Sbjct: 448 DSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVL 507
Query: 993 VLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSE 1034
+ L+T +SVEE IL A KL + V+ M +++ G +
Sbjct: 508 SINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDGGD 549
Score = 511 (184.9 bits), Expect = 1.1e-45, P = 1.1e-45
Identities = 131/344 (38%), Positives = 196/344 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVE----LNEEETILIIRR 56
TP+QN L ELWAL++F +P +F T +Q+ +A F TG+ + N++ET +
Sbjct: 220 TPIQNNLTELWALMHFCMPLVF---GTLDQFLSA-FKETGDGLSGLDVSNDKETY---KS 272
Query: 57 LHKVLRPFLLRRLKKE-VESQ---LPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
L +L F+LRR K +ES LP E + + LQK +Y + + + G
Sbjct: 273 LKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKEL---PGLL 329
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
+ +G +L+N ++QLRK C+HP++F IE + + G + + SGK
Sbjct: 330 ELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEE---------GEHLVQASGKLL 380
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++L + ++ HRVL+F QMT + IL+D+ R +SY RLDG+ ++E+R ++ F+
Sbjct: 381 VLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFS 440
Query: 233 -------EPE---SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRI 282
+ E S F+F++STRAGG+GLNL AADTVI ++ DWNP D QA RAHRI
Sbjct: 441 AKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 500
Query: 283 GQKNEVRVLRLITVNSVEERILAAARYKL---------NMDEKE 317
GQ + V + L+T +SVEE IL A KL NM+EKE
Sbjct: 501 GQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKE 544
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 818 (293.0 bits), Expect = 2.4e-80, Sum P(2) = 2.4e-80
Identities = 192/497 (38%), Positives = 279/497 (56%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N LKE+Q++G W+ + + + +LADEMGLGKT+Q+IA L YL + GP+LV+
Sbjct: 895 NLSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPFLVVA 954
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKD-KSV 661
PLSTL NW E KW +V Y GS R + K L +E ++ +++
Sbjct: 955 PLSTLGNWHKEILKWTKMKTLVFY-GSQETRGFISKYEFKHKDTYL---FEVLLTTYETI 1010
Query: 662 LSKIQWKCMIIDEGHRM-KNHHCK--LTQTLNTFYN--SSHRVLLTGTPLQNKLPELWAL 716
+S + + + H K ++ L+ + + H ++LTGTPLQN + ELW +
Sbjct: 1011 MSDHSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTGTPLQNDMKELWTM 1070
Query: 717 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEV 776
LNFL P F SC F E +L EE + +LH++L P+LLRR+K++V
Sbjct: 1071 LNFLDPDKFNSCQEF----------LDEYSDLKEESQV---SKLHQLLSPYLLRRMKEDV 1117
Query: 777 ESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRK 836
E +P K E +I+ ++S QK Y+ + R K KT L N ++Q+RK
Sbjct: 1118 ELSIPIKEETVIQVELSSTQKTYYRAILERNREFLSRGIKQKTN---LPKLSNIMIQIRK 1174
Query: 837 LCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQ 896
+CNHPF+ EE + G + ++S K L+D++L + K H+VL+F Q
Sbjct: 1175 VCNHPFLIPGAEESIVKQEKIAGDEELGELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQ 1234
Query: 897 MTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLN 956
M + + ILEDY +R+++Y RLDG+ KSE R + +F + + F+FLLSTRAGG+G+N
Sbjct: 1235 MVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGIN 1294
Query: 957 LQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNM 1016
L ADTVI+FDSDWNP DLQAQ R HRIGQ N V+V RLIT N+ EE + A KL +
Sbjct: 1295 LTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLL 1354
Query: 1017 DEKVIQAGMFDQKSTGS 1033
D V+ D+K T +
Sbjct: 1355 DHIVLSTNK-DKKQTNT 1370
Score = 622 (224.0 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 135/314 (42%), Positives = 187/314 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + ELW +LNFL P F SC F E +L EE + +LH++
Sbjct: 1058 TPLQNDMKELWTMLNFLDPDKFNSCQEF----------LDEYSDLKEESQV---SKLHQL 1104
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L P+LLRR+K++VE +P K E +I+ ++S QK Y+ + R K KT
Sbjct: 1105 LSPYLLRRMKEDVELSIPIKEETVIQVELSSTQKTYYRAILERNREFLSRGIKQKTN--- 1161
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
L N ++Q+RK+CNHPF+ EE + G + ++S K L+D++L +
Sbjct: 1162 LPKLSNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGDEELGELLVKSSSKLVLVDKLLQR 1221
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
K H+VL+F QM + + ILEDY +R+++Y RLDG+ KSE R + +F + + F+
Sbjct: 1222 LKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRFV 1281
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGG+G+NL ADTVI+FDSDWNP DLQAQ R HRIGQ N V+V RLIT N+ E
Sbjct: 1282 FLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYE 1341
Query: 301 ERILAAARYKLNMD 314
E + A KL +D
Sbjct: 1342 EYLFECATKKLLLD 1355
Score = 41 (19.5 bits), Expect = 2.4e-80, Sum P(2) = 2.4e-80
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 506 EKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIK 552
+++ +D E T + T +KV ++ +N K KE IK
Sbjct: 620 DEQMKDTESTTTTTTTTTKNTESTSTDKVKDEEMTDINSKTKETIIK 666
Score = 38 (18.4 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 856 GQNNTVVSGP---DIYRTSGKFELLDRILPKFKETKHR 890
G NN+ + P + + K LDR++ K + HR
Sbjct: 2493 GNNNSNNNNPFFGNNNNNNNKLPSLDRMINKNDNSSHR 2530
Score = 37 (18.1 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILAD 571
K K Q+KG E+ L N + +L D
Sbjct: 2668 KWKTIQVKGFEFESVLMNVQDDTLLED 2694
Score = 37 (18.1 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 562 NNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
NNN N I + MG G + + ++ T +++ NL
Sbjct: 2899 NNNNNNINNNMMGSG--IGSPSISTSPQQRQPNL 2930
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 513 (185.6 bits), Expect = 2.9e-80, Sum P(3) = 2.9e-80
Identities = 119/322 (36%), Positives = 184/322 (57%)
Query: 534 VTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKK 592
+ EQ ++ +G +L +YQI GL W+ ++ +NGILADEMGLGKT+Q IA L YL E
Sbjct: 276 IVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENG 335
Query: 593 KNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN---SKFNVLL 649
+ +L++VP STL NW E +W P V Y GS RR ++GR + F+VLL
Sbjct: 336 LSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFTGFDVLL 395
Query: 650 TTYEFI---IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPL 706
TTY + +++ + + +I DE H +KN + L T N+ R+LLTGTPL
Sbjct: 396 TTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITI-NARMRILLTGTPL 454
Query: 707 QNKLPELWALLNFLLPSIF-KSCSTFEQWFNAPFATTGEKVELNE-EETILIIRRLHKVL 764
QN L EL +LL F++P F KS + F + G++ E+++ +ET I+R +++
Sbjct: 455 QNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQ--IQRAKRIM 512
Query: 765 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 824
+PF+LRRLKK+V LP+K+ + K MS QK+ Y L + + KG+
Sbjct: 513 KPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYY-----SNNKGEVCSSSE 567
Query: 825 RALKNTIVQLRKLCNHPFMFQN 846
RA ++++R++ NHP + ++
Sbjct: 568 RAGIAIMMEMRRIANHPLLMRH 589
Score = 374 (136.7 bits), Expect = 2.9e-80, Sum P(3) = 2.9e-80
Identities = 76/157 (48%), Positives = 106/157 (67%)
Query: 865 PD-IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 923
PD + SGKF LD +LPK K HRVL+F Q T ++ I+E+Y R F + RLDG T
Sbjct: 644 PDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATA 703
Query: 924 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 983
R +L+ FN +S F+FLLST+AGG+G+NL AADT +I D D+NP+ D QA+DR H
Sbjct: 704 VNVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCH 762
Query: 984 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKV 1020
R+GQ+ V + RLI+ +++EE IL AA KL +++ +
Sbjct: 763 RMGQQRPVTIYRLISESTIEEGILMAAEEKLKLEKDI 799
Score = 374 (136.7 bits), Expect = 5.8e-46, Sum P(2) = 5.8e-46
Identities = 79/161 (49%), Positives = 107/161 (66%)
Query: 162 PD-IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
PD + SGKF LD +LPK K HRVL+F Q T ++ I+E+Y R F + RLDG T
Sbjct: 644 PDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATA 703
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R +L+ FN +S F+FLLST+AGG+G+NL AADT +I D D+NP+ D QA+DR H
Sbjct: 704 VNVRQDLITDFNGDDS-IFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCH 762
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRN 321
R+GQ+ V + RLI+ +++EE IL AA KL + EK+ N
Sbjct: 763 RMGQQRPVTIYRLISESTIEEGILMAAEEKLKL-EKDITSN 802
Score = 252 (93.8 bits), Expect = 2.4e-51, Sum P(3) = 2.4e-51
Identities = 79/257 (30%), Positives = 127/257 (49%)
Query: 645 FNVLLTTYEFI---IKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLL 701
F+VLLTTY + +++ + + +I DE H +KN + L T N+ R+LL
Sbjct: 391 FDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITI-NARMRILL 449
Query: 702 TGTPLQNKLPELWALLNFLLPSIF-KSCSTFEQWFNAPFATTGEKVELNE-EETILIIRR 759
TGTPLQN L EL +LL F++P F KS + F + G++ E+++ +ET I+R
Sbjct: 450 TGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQ--IQR 507
Query: 760 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL-----HNRGILLTDGS 814
++++PF+LRRLKK+V LP+K+ + K MS QK+ Y L +N+G + +
Sbjct: 508 AKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYYSNNKGEVCSSSE 567
Query: 815 EKGKTGEGGARALKN---------TIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 865
G R + N T LR + ++ Q+I + V+S
Sbjct: 568 RAGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIFEELAVMSDF 627
Query: 866 DIYRTSGKFELLDRILP 882
+Y+ K E D +P
Sbjct: 628 QVYQMMNKHEFYDVKIP 644
Score = 196 (74.1 bits), Expect = 5.8e-46, Sum P(2) = 5.8e-46
Identities = 49/145 (33%), Positives = 83/145 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIF-KSCSTFEQWFNAPFATTGEKVELNE-EETILIIRRLH 58
TPLQN L EL +LL F++P F KS + F + G++ E+++ +ET I+R
Sbjct: 452 TPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQDEVSQFQETQ--IQRAK 509
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
++++PF+LRRLKK+V LP+K+ + K MS QK+ Y L + + KG+
Sbjct: 510 RIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDYY-----SNNKGEVCS 564
Query: 119 GGARALKNTIVQLRKLCNHPFMFQN 143
RA ++++R++ NHP + ++
Sbjct: 565 SSERAGIAIMMEMRRIANHPLLMRH 589
Score = 42 (19.8 bits), Expect = 2.9e-80, Sum P(3) = 2.9e-80
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 294 ITVNSVEERILAAARYKLNMD 314
+TV EER +AAA+ + D
Sbjct: 76 LTVKEKEERYMAAAKISPHFD 96
Score = 41 (19.5 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERIL 304
D AH + R LIT+N+ RIL
Sbjct: 422 DEAHMLKNMTTQRYANLITINA-RMRIL 448
Score = 37 (18.1 bits), Expect = 5.4e-45, Sum P(3) = 5.4e-45
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 1060 TVNQLIARTEDELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVE 1109
T+ + I +E +K KGE + +K L + D D+ E
Sbjct: 780 TIEEGILMAAEEKLKLEKDITSNEKGEVHEQRCVVKLLTTALGLDKDQEE 829
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 553 (199.7 bits), Expect = 1.3e-79, Sum P(3) = 1.3e-79
Identities = 131/306 (42%), Positives = 183/306 (59%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
N KL+ YQ+ GL+W++ L+ + L+GILADEMGLGKT+Q IA L +L EK GP+L+ V
Sbjct: 445 NLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYEKGIK-GPHLITV 503
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNS--KFNVLLTTYEFII---K 657
P STL NWV E W PS V+ Y GS R+ L+ + FN++++TY I
Sbjct: 504 PSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILTGLIDFNIIVSTYNLTIGNDH 563
Query: 658 DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALL 717
D+S+ K++ K + DEGH +KN + + L T N+ HR+LLTGTPLQN L EL +LL
Sbjct: 564 DRSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTI-NAEHRLLLTGTPLQNNLLELMSLL 622
Query: 718 NFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVE 777
NF++PS+F S ST + + F+T + E + + + RL +++PF+LRR+K EV
Sbjct: 623 NFIMPSMFSS-STSQ--ISKMFSTRSSEEESSFHKDRIAQARL--IMKPFILRRVKSEVL 677
Query: 778 SQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKL 837
+LP K+E I C MS Q LY L R KT G R L N ++QLRK+
Sbjct: 678 KELPPKMEKIEMCPMSDAQHKLYDILFKR---------LKKTPNGDKRELCNVMMQLRKM 728
Query: 838 CNHPFM 843
NHP +
Sbjct: 729 ANHPLL 734
Score = 325 (119.5 bits), Expect = 1.3e-79, Sum P(3) = 1.3e-79
Identities = 69/149 (46%), Positives = 99/149 (66%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGKF LL + L K KE RV++F Q T ++ I+E D Y+RLDG+T +R L
Sbjct: 800 SGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGL 859
Query: 931 LRKFN-EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 989
+ K+N PE F+FLLSTRAGG G+NL +A+TVI+ D D NP D QA+DR HR+GQ
Sbjct: 860 IDKYNTNPE--IFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTR 917
Query: 990 EVRVLRLITVNSVEERILAAARYKLNMDE 1018
V+V++LI+ +S+E+ +L + KL +++
Sbjct: 918 TVQVIKLISKDSIEDCMLRVGQEKLKLEQ 946
Score = 325 (119.5 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 69/149 (46%), Positives = 99/149 (66%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGKF LL + L K KE RV++F Q T ++ I+E D Y+RLDG+T +R L
Sbjct: 800 SGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAERIGL 859
Query: 228 LRKFN-EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 286
+ K+N PE F+FLLSTRAGG G+NL +A+TVI+ D D NP D QA+DR HR+GQ
Sbjct: 860 IDKYNTNPE--IFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMGQTR 917
Query: 287 EVRVLRLITVNSVEERILAAARYKLNMDE 315
V+V++LI+ +S+E+ +L + KL +++
Sbjct: 918 TVQVIKLISKDSIEDCMLRVGQEKLKLEQ 946
Score = 215 (80.7 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 57/140 (40%), Positives = 79/140 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL +LLNF++PS+F S ST + + F+T + E + + + RL +
Sbjct: 609 TPLQNNLLELMSLLNFIMPSMFSS-STSQ--ISKMFSTRSSEEESSFHKDRIAQARL--I 663
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
++PF+LRR+K EV +LP K+E I C MS Q LY L R KT G
Sbjct: 664 MKPFILRRVKSEVLKELPPKMEKIEMCPMSDAQHKLYDILFKR---------LKKTPNGD 714
Query: 121 ARALKNTIVQLRKLCNHPFM 140
R L N ++QLRK+ NHP +
Sbjct: 715 KRELCNVMMQLRKMANHPLL 734
Score = 48 (22.0 bits), Expect = 1.3e-79, Sum P(3) = 1.3e-79
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 40 GEKVELNEEETIL-IIRRLHKVLRPFLLRRLKKEVESQL-----PEKVEYIIKCD---MS 90
G KV L E + +L ++ R K+ + + + + + +E+ + P+ + +K +
Sbjct: 396 GCKVVLKERQVVLDLMGRCEKIAQK-MTKDVTQVIEAGMGSIKQPKVLNSNLKLQAYQLI 454
Query: 91 GLQKLLYQHLHNRGILLTDGSEKGKT 116
GL+ L+ H H +L D GKT
Sbjct: 455 GLKWLILLHQHKLSGILADEMGLGKT 480
Score = 48 (22.0 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERIL 304
D H + N +R L+T+N+ E R+L
Sbjct: 579 DEGHMLKNMNSLRYRHLMTINA-EHRLL 605
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 795 (284.9 bits), Expect = 1.9e-79, Sum P(2) = 1.9e-79
Identities = 191/529 (36%), Positives = 294/529 (55%)
Query: 520 EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTV 579
+ +Y+ Y K+ +Q S + G+++++Q+ G+ WM L++ N NGILADEMGLGKTV
Sbjct: 365 KGVFYNTRPPYR-KLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTV 423
Query: 580 QTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGR 639
QT+ L+YL+ K GP+L++VPLST+ W W P N + Y G+ +R ++
Sbjct: 424 QTVCFLSYLVHSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIR-- 481
Query: 640 MKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRV 699
++ L+T +K +L+ ++ I+ + + N + + +HR+
Sbjct: 482 ----EYEFYLSTNSRKLKFNILLTTYEY---ILKDKQELNNIRWQYLAI-----DEAHRL 529
Query: 700 LLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE---KVELNEE----E 752
+ + L L + L+ + E F G+ + ELN + E
Sbjct: 530 KNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPGKFYIRDELNFDQPNAE 589
Query: 753 TILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTD 812
IR L + L+PF+LRRLKK+VE LP K E I++ ++S +Q Y+++ +
Sbjct: 590 QERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALT 649
Query: 813 GSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNT---VVSGPDIYR 869
G G+ G +L N +V+L+K+ NHP++F EK+ +G+ T + G I
Sbjct: 650 GHTDGR----GQLSLLNIVVELKKVSNHPYLFPGAAEKWM--MGRKMTREDTLRG--IIM 701
Query: 870 TSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGE 929
SGK LLD++L + K HRVL+F QM +++ IL +Y R ++Y RLDGT + R
Sbjct: 702 NSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRV 761
Query: 930 LLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKN 989
+ FN P+S F+FLLSTRAGGLG+NL ADTVIIFDSDWNP DLQA RAHRIGQKN
Sbjct: 762 SIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKN 821
Query: 990 EVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEF 1038
V V R ++ ++VEE IL AR K+ ++ +I G+ +KS S+ ++
Sbjct: 822 HVNVYRFLSKDTVEEDILERARRKMILEYAIISLGV-TEKSKNSKNDKY 869
Score = 559 (201.8 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 121/264 (45%), Positives = 168/264 (63%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
IR L + L+PF+LRRLKK+VE LP K E I++ ++S +Q Y+++ + G
Sbjct: 594 IRDLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTD 653
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNT---VVSGPDIYRTSGK 170
G+ G +L N +V+L+K+ NHP++F EK+ +G+ T + G I SGK
Sbjct: 654 GR----GQLSLLNIVVELKKVSNHPYLFPGAAEKWM--MGRKMTREDTLRG--IIMNSGK 705
Query: 171 FELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRK 230
LLD++L + K HRVL+F QM +++ IL +Y R ++Y RLDGT + R +
Sbjct: 706 MVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDH 765
Query: 231 FNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRV 290
FN P+S F+FLLSTRAGGLG+NL ADTVIIFDSDWNP DLQA RAHRIGQKN V V
Sbjct: 766 FNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNV 825
Query: 291 LRLITVNSVEERILAAARYKLNMD 314
R ++ ++VEE IL AR K+ ++
Sbjct: 826 YRFLSKDTVEEDILERARRKMILE 849
Score = 209 (78.6 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 55/148 (37%), Positives = 82/148 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL +L+NFL+P F F+ P A E+E IR L +
Sbjct: 554 TPLQNNLKELASLVNFLMPGKFYIRDELN--FDQPNA---------EQERD--IRDLQER 600
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PF+LRRLKK+VE LP K E I++ ++S +Q Y+++ + G G+ G
Sbjct: 601 LQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGR----G 656
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKY 148
+L N +V+L+K+ NHP++F EK+
Sbjct: 657 QLSLLNIVVELKKVSNHPYLFPGAAEKW 684
Score = 40 (19.1 bits), Expect = 1.9e-79, Sum P(2) = 1.9e-79
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 206 IWRDFSYLRLD 216
++RDFSY +D
Sbjct: 111 VYRDFSYTEID 121
Score = 39 (18.8 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 300 EERILAAARYK------LNMDEKEYHRNNTARTQK 328
EER+LAA R K +E+E ++ +RT K
Sbjct: 957 EERMLAAQRAKEEERERREEEERENDEDHPSRTYK 991
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 545 (196.9 bits), Expect = 2.9e-79, Sum P(3) = 2.9e-79
Identities = 130/319 (40%), Positives = 187/319 (58%)
Query: 536 EQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ S++ +LK YQ GL W+ L+ + LNGILADEMGLGKT+Q IA L ++ ++
Sbjct: 422 EQPSVLNQSLELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHIYQEGDR 481
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYK-GSPLARRALQGRMKNS--KFNVLLTT 651
GP+L++VP STL NW+ E W P NV+ Y GS R+ L+ + N FNV++TT
Sbjct: 482 -GPHLIVVPASTLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRADISNRVVDFNVIVTT 540
Query: 652 YEFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQN 708
Y I D+S+ K++ I DEGH +KN Q L N+ HR+LLTGTP+QN
Sbjct: 541 YNCAISSSDDRSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRI-NAKHRLLLTGTPVQN 599
Query: 709 KLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 767
L EL +LLNF++P +F S S + F++ A T E+ E+E I ++ +++PF
Sbjct: 600 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSK-AKTAEEQSTYEKERIAHAKQ---IIKPF 655
Query: 768 LLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARAL 827
+LRR+K EV QLP K ++I C MS Q+ LY L N+ G+EK +
Sbjct: 656 ILRRVKDEVLKQLPPKKDHIELCAMSEKQEQLYCDLLNKLKKTMKGNEKNSD-------M 708
Query: 828 KNTIVQLRKLCNHPFMFQN 846
N ++QLRK+ NHP + ++
Sbjct: 709 GNAMMQLRKMANHPLLHRH 727
Score = 341 (125.1 bits), Expect = 2.9e-79, Sum P(3) = 2.9e-79
Identities = 68/158 (43%), Positives = 105/158 (66%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGKF +L+R+L KE RV++F Q T ++ ILE + Y+RLDG T+ DR L
Sbjct: 790 SGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIHL 849
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+GQ E
Sbjct: 850 IDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRE 908
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQ 1028
V+V++LI+ ++EE +L + KL +++ + A + ++
Sbjct: 909 VKVIKLISKGTIEESMLKMNQQKLKLEQDMTAADLGEE 946
Score = 337 (123.7 bits), Expect = 5.1e-43, Sum P(2) = 5.1e-43
Identities = 67/148 (45%), Positives = 100/148 (67%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGKF +L+R+L KE RV++F Q T ++ ILE + Y+RLDG T+ DR L
Sbjct: 790 SGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIHL 849
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+GQ E
Sbjct: 850 IDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRE 908
Query: 288 VRVLRLITVNSVEERILAAARYKLNMDE 315
V+V++LI+ ++EE +L + KL +++
Sbjct: 909 VKVIKLISKGTIEESMLKMNQQKLKLEQ 936
Score = 209 (78.6 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 54/144 (37%), Positives = 83/144 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ A T E+ E+E I ++
Sbjct: 595 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSK-AKTAEEQSTYEKERIAHAKQ--- 650
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K EV QLP K ++I C MS Q+ LY L N+ G+EK
Sbjct: 651 IIKPFILRRVKDEVLKQLPPKKDHIELCAMSEKQEQLYCDLLNKLKKTMKGNEKNSD--- 707
Query: 120 GARALKNTIVQLRKLCNHPFMFQN 143
+ N ++QLRK+ NHP + ++
Sbjct: 708 ----MGNAMMQLRKMANHPLLHRH 727
Score = 37 (18.1 bits), Expect = 2.9e-79, Sum P(3) = 2.9e-79
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 32 FNAPFATTGEKVELNEEETILIIRRL 57
++ P A G K E+ E +++ +L
Sbjct: 168 YHGPEALDGSKSEIQWERQEMLVEKL 193
Score = 37 (18.1 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 735 FNAPFATTGEKVELNEEETILIIRRL 760
++ P A G K E+ E +++ +L
Sbjct: 168 YHGPEALDGSKSEIQWERQEMLVEKL 193
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 542 (195.9 bits), Expect = 5.2e-79, Sum P(3) = 5.2e-79
Identities = 130/315 (41%), Positives = 185/315 (58%)
Query: 536 EQASIMV-NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ SIM N LK YQ GL W+ L+ + +N ILADEMGLGKTVQ IA L +L +
Sbjct: 463 EQPSIMSENLVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGDS 522
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNS--KFNVLLTTY 652
GP+LV+VP ST+ NW+ EF +W PS N++ Y GS R+ L+ + N +FNV++TTY
Sbjct: 523 -GPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLRYDILNKVVEFNVIVTTY 581
Query: 653 EFII---KDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
I +D+S+ +++ + DEGH +KN Q L T N+ R+LLTGTP+QN
Sbjct: 582 NCAISSAEDRSLFRRLKLNFAVFDEGHMLKNMSAIRYQHLMTL-NARSRLLLTGTPVQNN 640
Query: 710 LPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
L EL +LLNF++P +F S S ++ F++ +T E+ +E I ++++PF+
Sbjct: 641 LLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKER----IAHAKQIMKPFI 696
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K EV QLP K + I C MS Q+ LY L N+ D +EK L
Sbjct: 697 LRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSE-------LC 749
Query: 829 NTIVQLRKLCNHPFM 843
N ++ LRK+ NHP +
Sbjct: 750 NVMMHLRKMANHPLL 764
Score = 331 (121.6 bits), Expect = 5.2e-79, Sum P(3) = 5.2e-79
Identities = 68/173 (39%), Positives = 109/173 (63%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGKF +L+++L K+ RV++F Q T ++ I+E + Y+RLDG T+ +R L
Sbjct: 830 SGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHL 889
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ +FN + FIFLLST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+GQ E
Sbjct: 890 IDEFNT-DMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKE 948
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
V+V++LI ++EE +L ++ KL +++ + D+ + + L+T L
Sbjct: 949 VKVIKLIGKGTIEESMLKISQQKLRLEQDMTTNDTGDEGTIPLDMATLLKTSL 1001
Score = 331 (121.6 bits), Expect = 9.0e-42, Sum P(2) = 9.0e-42
Identities = 67/156 (42%), Positives = 104/156 (66%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGKF +L+++L K+ RV++F Q T ++ I+E + Y+RLDG T+ +R L
Sbjct: 830 SGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVFLRHHQHRYVRLDGKTQISERIHL 889
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ +FN + FIFLLST+AGGLG+NL +A+ VI+ D D NP+ D QA+DR HR+GQ E
Sbjct: 890 IDEFNT-DMDIFIFLLSTKAGGLGINLTSANIVILHDIDCNPYNDKQAEDRCHRVGQTKE 948
Query: 288 VRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
V+V++LI ++EE +L ++ KL + E++ N+T
Sbjct: 949 VKVIKLIGKGTIEESMLKISQQKLRL-EQDMTTNDT 983
Score = 204 (76.9 bits), Expect = 9.0e-42, Sum P(2) = 9.0e-42
Identities = 52/141 (36%), Positives = 78/141 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S ++ F++ +T E+ +E I +
Sbjct: 635 TPVQNNLLELMSLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQTIFEKER----IAHAKQ 690
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K EV QLP K + I C MS Q+ LY L N+ D +EK
Sbjct: 691 IMKPFILRRVKSEVLKQLPPKQDKIKFCQMSKKQEQLYSDLLNKLKKSIDATEKNSE--- 747
Query: 120 GARALKNTIVQLRKLCNHPFM 140
L N ++ LRK+ NHP +
Sbjct: 748 ----LCNVMMHLRKMANHPLL 764
Score = 50 (22.7 bits), Expect = 5.2e-79, Sum P(3) = 5.2e-79
Identities = 27/130 (20%), Positives = 51/130 (39%)
Query: 261 IIFDSDWNPHQDLQA-----QDRAHRI--GQKNEVRVLRLITVNSVEERILAAARYKLNM 313
++ + DW+ H+ L+A +D + K EV + + ++ + ++A+ K N
Sbjct: 244 VLQEHDWSFHEALEALKLFAEDETDALQNAAKKEVSNGKEFSRSNKNDN-KSSAKAKANQ 302
Query: 314 DEKEYHRNNTARTQKLNKAIINYHINAXXXXXXXXXXXXXXXXXXLMAED-EEGYRKLID 372
+ + N + + K Y NA + ED G KL +
Sbjct: 303 NSNKAMAQNGVKKKGKGK---KYSENAKRDTRDLESEESASDAGSCLDEDYSSGDEKLEE 359
Query: 373 QKKDKRLAFL 382
+ K K L+FL
Sbjct: 360 EYKTKILSFL 369
Score = 40 (19.1 bits), Expect = 7.0e-24, Sum P(3) = 7.0e-24
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 91 GLQKLLYQHLHNRGILLTDGSEKGKT 116
GL L H H ++L D GKT
Sbjct: 481 GLNWLALLHKHKVNMILADEMGLGKT 506
Score = 40 (19.1 bits), Expect = 7.0e-24, Sum P(3) = 7.0e-24
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + + +R L+T+N+ +L + N+ E
Sbjct: 605 DEGHMLKNMSAIRYQHLMTLNARSRLLLTGTPVQNNLLE 643
Score = 37 (18.1 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 648 LLTTYEFIIKDKSVLSKIQWKC 669
L+ + +IK++ V+ K+ KC
Sbjct: 417 LIWDCQTLIKEREVVMKLMNKC 438
>UNIPROTKB|H0YGM3 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC011442
EMBL:AC011485 EMBL:AC006127 HGNC:HGNC:11100 ChiTaRS:SMARCA4
PRIDE:H0YGM3 Ensembl:ENST00000538456 Bgee:H0YGM3 Uniprot:H0YGM3
Length = 427
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 160/244 (65%), Positives = 184/244 (75%)
Query: 913 FSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNP 972
F YLRLDGTTK+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNP
Sbjct: 1 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 60
Query: 973 HQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTG 1032
HQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+KVIQAGMFDQKS+
Sbjct: 61 HQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSS 120
Query: 1033 SERHEFLQTILHQXXXXXXXXXXXXXXTVNQLIARTEDELTLFQKMDAERRKGET----- 1087
ER FLQ IL TVNQ+IAR E+E LF +MD +RR+ E
Sbjct: 121 HERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKR 180
Query: 1088 KPRLVEIKELPDWMVKDDDEVENSMYXXXXXXXXXXALMGRGSRQRKQVDYTDSLTDQEW 1147
KPRL+E ELP W++KDD EVE + GRGSR RK+VDY+DSLT+++W
Sbjct: 181 KPRLMEEDELPSWIIKDDAEVER-----LTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQW 235
Query: 1148 LKAI 1151
LK I
Sbjct: 236 LKKI 239
Score = 484 (175.4 bits), Expect = 4.7e-45, P = 4.7e-45
Identities = 93/107 (86%), Positives = 102/107 (95%)
Query: 210 FSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNP 269
F YLRLDGTTK+EDRG LL+ FNEP S+YFIFLLSTRAGGLGLNLQ+ADTVIIFDSDWNP
Sbjct: 1 FKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNP 60
Query: 270 HQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEK 316
HQDLQAQDRAHRIGQ+NEVRVLRL TVNSVEE+ILAAA+YKLN+D+K
Sbjct: 61 HQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQK 107
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 531 (192.0 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 126/315 (40%), Positives = 184/315 (58%)
Query: 536 EQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ S++ LK YQ GL W+ ++ + LNGILADEMGLGKT+Q IA L YL ++ N
Sbjct: 481 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEG-N 539
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNS--KFNVLLTTY 652
GP+L++VP ST+ NW+ E W PS NV+ Y GS R+ ++ + N +NV++TTY
Sbjct: 540 KGPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTY 599
Query: 653 EFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
I D+S+ +++ I DEGH +KN Q L T N+ +R+LLTGTP+QN
Sbjct: 600 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI-NARNRLLLTGTPVQNN 658
Query: 710 LPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
L EL +LLNF++P +F S S + F++ E+ + E+E I ++ +++PF+
Sbjct: 659 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ---IIKPFI 714
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K+EV LP K + I C MS Q+ LY L NR + EK +
Sbjct: 715 LRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTE-------MC 767
Query: 829 NTIVQLRKLCNHPFM 843
N ++QLRK+ NHP +
Sbjct: 768 NVMMQLRKMANHPLL 782
Score = 335 (123.0 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 76/192 (39%), Positives = 113/192 (58%)
Query: 850 KYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFI 909
K QHI N+ D+ SGKF L IL + K+ RV++F Q T ++ ILE
Sbjct: 830 KQYQHI---NSYQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLK 886
Query: 910 WRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSD 969
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D
Sbjct: 887 HHQHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDID 945
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQK 1029
NP+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++ + D+
Sbjct: 946 CNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEG 1005
Query: 1030 STGSERHEFLQT 1041
S ++ L+T
Sbjct: 1006 SMPADIATLLKT 1017
Score = 328 (120.5 bits), Expect = 9.8e-40, Sum P(2) = 9.8e-40
Identities = 72/169 (42%), Positives = 104/169 (61%)
Query: 147 KYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFI 206
K QHI N+ D+ SGKF L IL + K+ RV++F Q T ++ ILE
Sbjct: 830 KQYQHI---NSYQLDMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLK 886
Query: 207 WRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSD 266
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D
Sbjct: 887 HHQHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDID 945
Query: 267 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
NP+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++
Sbjct: 946 CNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 994
Score = 188 (71.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 51/141 (36%), Positives = 78/141 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ E+ + E+E I ++
Sbjct: 653 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ--- 708
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K+EV LP K + I C MS Q+ LY L NR + EK
Sbjct: 709 IIKPFILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTE--- 765
Query: 120 GARALKNTIVQLRKLCNHPFM 140
+ N ++QLRK+ NHP +
Sbjct: 766 ----MCNVMMQLRKMANHPLL 782
Score = 42 (19.8 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + +R L+T+N+ +L + N+ E
Sbjct: 623 DEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLE 661
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 534 (193.0 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 126/315 (40%), Positives = 187/315 (59%)
Query: 536 EQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ SI+ LK YQ GL W+ ++ + LNGILADEMGLGKT+Q IA L YL ++ N
Sbjct: 489 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEG-N 547
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRM--KNSKFNVLLTTY 652
GP+L++VP ST+ NW+ E W P+ V+ Y GS R+ ++ + K ++NV++TTY
Sbjct: 548 KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTY 607
Query: 653 EFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
I D+S+ +++ I DEGH +KN Q L T N+++R+LLTGTP+QN
Sbjct: 608 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI-NANNRLLLTGTPVQNN 666
Query: 710 LPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF+
Sbjct: 667 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPFI 722
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K+EV QLP K + I C MS Q+ LY L NR + EK +
Sbjct: 723 LRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTE-------MC 775
Query: 829 NTIVQLRKLCNHPFM 843
N ++QLRK+ NHP +
Sbjct: 776 NVMMQLRKMANHPLL 790
Score = 332 (121.9 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 73/190 (38%), Positives = 111/190 (58%)
Query: 852 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 911
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 837 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 896
Query: 912 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 971
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 897 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 955
Query: 972 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKST 1031
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++ + D+ S
Sbjct: 956 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTIDEGDEGSM 1015
Query: 1032 GSERHEFLQT 1041
++ L+T
Sbjct: 1016 PADIATLLKT 1025
Score = 327 (120.2 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 69/167 (41%), Positives = 102/167 (61%)
Query: 149 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 208
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 837 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 896
Query: 209 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 268
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 897 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 955
Query: 269 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++
Sbjct: 956 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 1002
Score = 197 (74.4 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 52/141 (36%), Positives = 80/141 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ + E+ + E+E I ++
Sbjct: 661 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ--- 716
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K+EV QLP K + I C MS Q+ LY L NR + EK
Sbjct: 717 IIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTE--- 773
Query: 120 GARALKNTIVQLRKLCNHPFM 140
+ N ++QLRK+ NHP +
Sbjct: 774 ----MCNVMMQLRKMANHPLL 790
Score = 42 (19.8 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + +R L+T+N+ +L + N+ E
Sbjct: 631 DEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLE 669
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 534 (193.0 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 126/315 (40%), Positives = 188/315 (59%)
Query: 536 EQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ SI+ LK YQ GL W+ ++ + LNGILADEMGLGKT+Q IA L YL ++ N
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEG-N 544
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRM--KNSKFNVLLTTY 652
GP+L++VP ST+ NW+ E W P+ V+ Y GS R+ ++ + K ++NV++TTY
Sbjct: 545 KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTY 604
Query: 653 EFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
I D+S+ +++ I DEGH +KN Q L T N+++R+LLTGTP+QN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI-NANNRLLLTGTPVQNN 663
Query: 710 LPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF+
Sbjct: 664 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPFI 719
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K+EV QLP K + I C MS Q+ LY L NR + EK + +
Sbjct: 720 LRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEK-------STEMC 772
Query: 829 NTIVQLRKLCNHPFM 843
N ++QLRK+ NHP +
Sbjct: 773 NVMMQLRKMANHPLL 787
Score = 330 (121.2 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 72/190 (37%), Positives = 111/190 (58%)
Query: 852 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 911
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 834 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 893
Query: 912 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 971
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 894 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 952
Query: 972 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKST 1031
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++ + D+ +
Sbjct: 953 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTM 1012
Query: 1032 GSERHEFLQT 1041
++ L+T
Sbjct: 1013 PADIATLLKT 1022
Score = 327 (120.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 69/167 (41%), Positives = 102/167 (61%)
Query: 149 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 208
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 834 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 893
Query: 209 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 268
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 894 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 952
Query: 269 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++
Sbjct: 953 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 999
Score = 197 (74.4 bits), Expect = 6.8e-41, Sum P(2) = 6.8e-41
Identities = 52/141 (36%), Positives = 81/141 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ + E+ + E+E I ++
Sbjct: 658 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ--- 713
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K+EV QLP K + I C MS Q+ LY L NR + EK
Sbjct: 714 IIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEK------ 767
Query: 120 GARALKNTIVQLRKLCNHPFM 140
+ + N ++QLRK+ NHP +
Sbjct: 768 -STEMCNVMMQLRKMANHPLL 787
Score = 42 (19.8 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + +R L+T+N+ +L + N+ E
Sbjct: 628 DEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLE 666
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 534 (193.0 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 126/315 (40%), Positives = 188/315 (59%)
Query: 536 EQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ SI+ LK YQ GL W+ ++ + LNGILADEMGLGKT+Q IA L YL ++ N
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEG-N 544
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRM--KNSKFNVLLTTY 652
GP+L++VP ST+ NW+ E W P+ V+ Y GS R+ ++ + K ++NV++TTY
Sbjct: 545 KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTY 604
Query: 653 EFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
I D+S+ +++ I DEGH +KN Q L T N+++R+LLTGTP+QN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI-NANNRLLLTGTPVQNN 663
Query: 710 LPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF+
Sbjct: 664 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPFI 719
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K+EV QLP K + I C MS Q+ LY L NR + EK + +
Sbjct: 720 LRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEK-------STEMC 772
Query: 829 NTIVQLRKLCNHPFM 843
N ++QLRK+ NHP +
Sbjct: 773 NVMMQLRKMANHPLL 787
Score = 330 (121.2 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 72/190 (37%), Positives = 111/190 (58%)
Query: 852 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 911
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 834 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 893
Query: 912 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 971
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 894 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 952
Query: 972 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKST 1031
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++ + D+ +
Sbjct: 953 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTM 1012
Query: 1032 GSERHEFLQT 1041
++ L+T
Sbjct: 1013 PADIATLLKT 1022
Score = 327 (120.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 69/167 (41%), Positives = 102/167 (61%)
Query: 149 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 208
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 834 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 893
Query: 209 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 268
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 894 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 952
Query: 269 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++
Sbjct: 953 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 999
Score = 197 (74.4 bits), Expect = 6.8e-41, Sum P(2) = 6.8e-41
Identities = 52/141 (36%), Positives = 81/141 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ + E+ + E+E I ++
Sbjct: 658 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ--- 713
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K+EV QLP K + I C MS Q+ LY L NR + EK
Sbjct: 714 IIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEK------ 767
Query: 120 GARALKNTIVQLRKLCNHPFM 140
+ + N ++QLRK+ NHP +
Sbjct: 768 -STEMCNVMMQLRKMANHPLL 787
Score = 42 (19.8 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + +R L+T+N+ +L + N+ E
Sbjct: 628 DEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLE 666
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 534 (193.0 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 126/315 (40%), Positives = 188/315 (59%)
Query: 536 EQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ SI+ LK YQ GL W+ ++ + LNGILADEMGLGKT+Q IA L YL ++ N
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEG-N 544
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRM--KNSKFNVLLTTY 652
GP+L++VP ST+ NW+ E W P+ V+ Y GS R+ ++ + K ++NV++TTY
Sbjct: 545 KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTY 604
Query: 653 EFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
I D+S+ +++ I DEGH +KN Q L T N+++R+LLTGTP+QN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI-NANNRLLLTGTPVQNN 663
Query: 710 LPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF+
Sbjct: 664 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPFI 719
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K+EV QLP K + I C MS Q+ LY L NR + EK + +
Sbjct: 720 LRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEK-------STEMC 772
Query: 829 NTIVQLRKLCNHPFM 843
N ++QLRK+ NHP +
Sbjct: 773 NVMMQLRKMANHPLL 787
Score = 330 (121.2 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 72/190 (37%), Positives = 111/190 (58%)
Query: 852 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 911
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 834 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 893
Query: 912 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 971
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 894 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 952
Query: 972 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKST 1031
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++ + D+ +
Sbjct: 953 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGTM 1012
Query: 1032 GSERHEFLQT 1041
++ L+T
Sbjct: 1013 PADIATLLKT 1022
Score = 327 (120.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 69/167 (41%), Positives = 102/167 (61%)
Query: 149 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 208
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 834 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 893
Query: 209 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 268
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 894 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 952
Query: 269 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++
Sbjct: 953 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 999
Score = 197 (74.4 bits), Expect = 6.8e-41, Sum P(2) = 6.8e-41
Identities = 52/141 (36%), Positives = 81/141 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ + E+ + E+E I ++
Sbjct: 658 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ--- 713
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K+EV QLP K + I C MS Q+ LY L NR + EK
Sbjct: 714 IIKPFILRRVKEEVLKQLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNIEK------ 767
Query: 120 GARALKNTIVQLRKLCNHPFM 140
+ + N ++QLRK+ NHP +
Sbjct: 768 -STEMCNVMMQLRKMANHPLL 787
Score = 42 (19.8 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + +R L+T+N+ +L + N+ E
Sbjct: 628 DEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLE 666
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 529 (191.3 bits), Expect = 3.5e-77, Sum P(2) = 3.5e-77
Identities = 125/315 (39%), Positives = 186/315 (59%)
Query: 536 EQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ SI+ LK YQ GL W+ ++ + LNGILADEMGLGKT+Q IA L YL ++ N
Sbjct: 486 EQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNN 545
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN--SKFNVLLTTY 652
GP+L++VP ST+ NW+ E W P+ V+ Y GS R+ ++ + + +NV++TTY
Sbjct: 546 -GPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTY 604
Query: 653 EFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
I D+S+ +++ I DEGH +KN Q L T N+++R+LLTGTP+QN
Sbjct: 605 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI-NANNRLLLTGTPVQNN 663
Query: 710 LPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
L EL +LLNF++P +F S S + F++ + E+ + E+E I ++ +++PF+
Sbjct: 664 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ---IIKPFI 719
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K+EV QLP K + I C MS Q+ LY L NR + EK +
Sbjct: 720 LRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTE-------MC 772
Query: 829 NTIVQLRKLCNHPFM 843
N ++QLRK+ NHP +
Sbjct: 773 NVMMQLRKMANHPLL 787
Score = 333 (122.3 bits), Expect = 3.5e-77, Sum P(2) = 3.5e-77
Identities = 73/190 (38%), Positives = 111/190 (58%)
Query: 852 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 911
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 834 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 893
Query: 912 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 971
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 894 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 952
Query: 972 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKST 1031
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++ + D+ S
Sbjct: 953 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSM 1012
Query: 1032 GSERHEFLQT 1041
++ L+T
Sbjct: 1013 PADIATLLKT 1022
Score = 327 (120.2 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 69/167 (41%), Positives = 102/167 (61%)
Query: 149 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 208
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 834 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 893
Query: 209 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 268
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 894 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 952
Query: 269 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
P+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++
Sbjct: 953 PYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 999
Score = 195 (73.7 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 52/141 (36%), Positives = 80/141 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ + E+ + E+E I ++
Sbjct: 658 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQ-SIYEKERIAHAKQ--- 713
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K+EV QLP K + I C MS Q+ LY L NR + EK
Sbjct: 714 IIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTE--- 770
Query: 120 GARALKNTIVQLRKLCNHPFM 140
+ N ++QLRK+ NHP +
Sbjct: 771 ----MCNVMMQLRKMANHPLL 787
Score = 42 (19.8 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + +R L+T+N+ +L + N+ E
Sbjct: 628 DEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLE 666
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 538 (194.4 bits), Expect = 4.5e-77, Sum P(3) = 4.5e-77
Identities = 126/316 (39%), Positives = 188/316 (59%)
Query: 535 TEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKK 593
TEQ SI+ LK YQ GL W+ ++ + LNGILADEMGLGKT+Q IA L YL ++
Sbjct: 487 TEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEG- 545
Query: 594 NLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN--SKFNVLLTT 651
N GP+L++VP ST+ NW+ E W P+ V+ Y GS R+ ++ + + ++NV++TT
Sbjct: 546 NKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRYEEYNVIVTT 605
Query: 652 YEFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQN 708
Y I D+S+ +++ I DEGH +KN Q L T N+++R+LLTGTP+QN
Sbjct: 606 YNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI-NANNRLLLTGTPVQN 664
Query: 709 KLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 767
L EL +LLNF++P +F S S + F++ E+ + E+E I ++ +++PF
Sbjct: 665 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ---IIKPF 720
Query: 768 LLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARAL 827
+LRR+K+EV QLP K + I C MS Q+ LY +L NR + EK +
Sbjct: 721 ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMEKNTE-------M 773
Query: 828 KNTIVQLRKLCNHPFM 843
N ++QLRK+ NHP +
Sbjct: 774 CNVMMQLRKMANHPLL 789
Score = 330 (121.2 bits), Expect = 4.5e-77, Sum P(3) = 4.5e-77
Identities = 73/190 (38%), Positives = 110/190 (57%)
Query: 852 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 911
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 836 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 895
Query: 912 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 971
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 896 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 954
Query: 972 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKST 1031
P+ D QA+DR HR+GQ EV V++LI ++EE +L + KL +++ + D+ S
Sbjct: 955 PYNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSM 1014
Query: 1032 GSERHEFLQT 1041
++ L+T
Sbjct: 1015 PADIATLLKT 1024
Score = 324 (119.1 bits), Expect = 1.9e-40, Sum P(2) = 1.9e-40
Identities = 69/167 (41%), Positives = 101/167 (60%)
Query: 149 CQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWR 208
C+ N D+ SGKF +L IL + K+ RV++F Q T ++ ILE
Sbjct: 836 CKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHH 895
Query: 209 DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN 268
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D N
Sbjct: 896 QHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDIDCN 954
Query: 269 PHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
P+ D QA+DR HR+GQ EV V++LI ++EE +L + KL +++
Sbjct: 955 PYNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQ 1001
Score = 199 (75.1 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 52/141 (36%), Positives = 80/141 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ E+ + E+E I ++
Sbjct: 660 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ--- 715
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K+EV QLP K + I C MS Q+ LY +L NR + EK
Sbjct: 716 IIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYMNLFNRLKKSINNMEKNTE--- 772
Query: 120 GARALKNTIVQLRKLCNHPFM 140
+ N ++QLRK+ NHP +
Sbjct: 773 ----MCNVMMQLRKMANHPLL 789
Score = 42 (19.8 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + +R L+T+N+ +L + N+ E
Sbjct: 630 DEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLE 668
Score = 38 (18.4 bits), Expect = 4.5e-77, Sum P(3) = 4.5e-77
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 519 EEATYYSIAHTYHEK-VTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGI 568
E+ + + T EK + I+V+ ++ + +GL M + NN++ +
Sbjct: 99 EDVVSPNCSSTVQEKKFNKDTVIIVSEPSEDEESQGLPTMATRNNNDITNL 149
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 786 (281.7 bits), Expect = 7.6e-77, Sum P(2) = 7.6e-77
Identities = 179/505 (35%), Positives = 282/505 (55%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
E + S + NG+LKE+Q+KG+ +M + N N +LADEMGLGKTVQT+A +++L
Sbjct: 432 EPIKGTPSFLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHV 491
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTT 651
++ GP++V+VPLST+ +W F+ W+P N V Y G+ +R L+ ++ +++
Sbjct: 492 RRQQGPFVVVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLK------EYELMVDG 545
Query: 652 YEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLP 711
K +L+ ++ +++D + + + + +HR+ + L KL
Sbjct: 546 NPRRPKFNVLLTTYEY--VLVDSSF-LSQFNWQFMAV-----DEAHRLKNRDSQLYIKLQ 597
Query: 712 ELWALLNFLLPSI-----FKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRP 766
E + L+ S + N ++LN E + L K + P
Sbjct: 598 EFNSPARLLITGTPIQNNLAELSALLDFLNPGLVNVDADMDLNSEAASEKLAELTKAISP 657
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
F+LRR K +VES LP K E II+ ++S +Q Y+++ + + KG+ ++
Sbjct: 658 FMLRRTKTKVESDLPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGTKGQK-----QS 712
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L N +++L+K NHPFMF + E K + + V+ + +SGK LLD++L K K
Sbjct: 713 LLNIMMELKKASNHPFMFPSAETKILEGSTRREDVLRA--LITSSGKMMLLDQLLAKLKR 770
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
HRVL+F QM +++ IL DY +R ++Y RLDGT S R + +N P+S F F+L
Sbjct: 771 DGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFIL 830
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
STRAGGLG+NL ADTVI+FDSDWNP DLQA RAHRIGQ V V RL++ ++VEE +
Sbjct: 831 STRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEV 890
Query: 1007 LAAARYKLNMDEKVIQAGMFDQKST 1031
+ AR KL ++ IQ G+ D++++
Sbjct: 891 IERARNKLLLEFITIQRGVTDKEAS 915
Score = 555 (200.4 bits), Expect = 8.3e-50, P = 8.3e-50
Identities = 119/289 (41%), Positives = 171/289 (59%)
Query: 26 STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYII 85
S + N ++LN E + L K + PF+LRR K +VES LP K E II
Sbjct: 620 SALLDFLNPGLVNVDADMDLNSEAASEKLAELTKAISPFMLRRTKTKVESDLPPKTEKII 679
Query: 86 KCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 145
+ ++S +Q Y+++ + + KG+ ++L N +++L+K NHPFMF + E
Sbjct: 680 RVELSDVQLEYYKNILTKNYAALNEGTKGQK-----QSLLNIMMELKKASNHPFMFPSAE 734
Query: 146 EKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYF 205
K + + V+ + +SGK LLD++L K K HRVL+F QM +++ IL DY
Sbjct: 735 TKILEGSTRREDVLRA--LITSSGKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYM 792
Query: 206 IWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDS 265
+R ++Y RLDGT S R + +N P+S F F+LSTRAGGLG+NL ADTVI+FDS
Sbjct: 793 EYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFILSTRAGGLGINLMTADTVILFDS 852
Query: 266 DWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
DWNP DLQA RAHRIGQ V V RL++ ++VEE ++ AR KL ++
Sbjct: 853 DWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLE 901
Score = 137 (53.3 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 38/115 (33%), Positives = 57/115 (49%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TP+QN L EL ALL+FL P + ++LN E + L K
Sbjct: 610 TPIQNNLAELSALLDFLNPGL---------------VNVDADMDLNSEAASEKLAELTKA 654
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGK 115
+ PF+LRR K +VES LP K E II+ ++S +Q Y+++ + + KG+
Sbjct: 655 ISPFMLRRTKTKVESDLPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGTKGQ 709
Score = 41 (19.5 bits), Expect = 7.6e-77, Sum P(2) = 7.6e-77
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 89 MSGLQKLLYQHLHNRGILLTDGSEKGKT 116
+ G+ + + + NR ++L D GKT
Sbjct: 451 VKGVNFMAFNWVKNRNVVLADEMGLGKT 478
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 529 (191.3 bits), Expect = 1.4e-76, Sum P(3) = 1.4e-76
Identities = 125/315 (39%), Positives = 184/315 (58%)
Query: 536 EQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
EQ S++ LK YQ GL W+ ++ + LNGILADEMGLGKT+Q IA L YL ++ N
Sbjct: 484 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEG-N 542
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNS--KFNVLLTTY 652
GP+L++VP ST+ NW+ E W P+ NV+ Y GS R+ ++ + N +NV++TTY
Sbjct: 543 KGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTY 602
Query: 653 EFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
I D+S+ +++ I DEGH +KN Q L T N+ +R+LLTGTP+QN
Sbjct: 603 NCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTI-NARNRLLLTGTPVQNN 661
Query: 710 LPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFL 768
L EL +LLNF++P +F S S + F++ E+ + E+E I ++ +++PF+
Sbjct: 662 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ---IIKPFI 717
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALK 828
LRR+K+EV LP K + I C MS Q+ LY L NR + EK +
Sbjct: 718 LRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTE-------MC 770
Query: 829 NTIVQLRKLCNHPFM 843
N ++QLRK+ NHP +
Sbjct: 771 NVMMQLRKMANHPLL 785
Score = 335 (123.0 bits), Expect = 1.4e-76, Sum P(3) = 1.4e-76
Identities = 76/192 (39%), Positives = 113/192 (58%)
Query: 850 KYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFI 909
K QHI N+ D+ SGKF L IL + K+ RV++F Q T ++ ILE
Sbjct: 833 KQYQHI---NSYQLDMDLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLK 889
Query: 910 WRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSD 969
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D
Sbjct: 890 HHQHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDID 948
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQK 1029
NP+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++ + D+
Sbjct: 949 CNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEG 1008
Query: 1030 STGSERHEFLQT 1041
S ++ L+T
Sbjct: 1009 SMPADIATLLKT 1020
Score = 328 (120.5 bits), Expect = 7.7e-40, Sum P(2) = 7.7e-40
Identities = 72/169 (42%), Positives = 104/169 (61%)
Query: 147 KYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFI 206
K QHI N+ D+ SGKF L IL + K+ RV++F Q T ++ ILE
Sbjct: 833 KQYQHI---NSYQLDMDLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLK 889
Query: 207 WRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSD 266
YLRLDG T+ +R L+ +FN + F+FLLST+AGGLG+NL +A+ VI+ D D
Sbjct: 890 HHQHRYLRLDGKTQISERIHLIDEFNT-DMDIFVFLLSTKAGGLGINLTSANVVILHDID 948
Query: 267 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
NP+ D QA+DR HR+GQ EV V++LI+ ++EE +L + KL +++
Sbjct: 949 CNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQ 997
Score = 189 (71.6 bits), Expect = 1.3e-40, Sum P(2) = 1.3e-40
Identities = 51/141 (36%), Positives = 78/141 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSC-STFEQWFNAPFATTGEKVELNEEETILIIRRLHK 59
TP+QN L EL +LLNF++P +F S S + F++ E+ + E+E I ++
Sbjct: 656 TPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQ-SIYEKERIAHAKQ--- 711
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+++PF+LRR+K+EV LP K + I C MS Q+ LY L NR + EK
Sbjct: 712 IIKPFILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTE--- 768
Query: 120 GARALKNTIVQLRKLCNHPFM 140
+ N ++QLRK+ NHP +
Sbjct: 769 ----MCNVMMQLRKMANHPLL 785
Score = 42 (19.8 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D H + +R L+T+N+ +L + N+ E
Sbjct: 626 DEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLE 664
Score = 38 (18.4 bits), Expect = 1.4e-76, Sum P(3) = 1.4e-76
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 271 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 310
+D + Q Q+++ +L+LI S + +AAA K
Sbjct: 157 KDAKLQTLKELFPQRSDSDLLKLIDSTSTMDGAIAAALLK 196
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 533 (192.7 bits), Expect = 1.6e-76, Sum P(4) = 1.6e-76
Identities = 116/285 (40%), Positives = 166/285 (58%)
Query: 529 TYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYL 588
T+ K+ Q I +N ++ YQ+ GL WM LY +NGILADEMGLGKTVQTI+LL ++
Sbjct: 526 TFSHKLVAQPKI-INKVMRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLLAHI 584
Query: 589 MEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSK---- 644
E + GP+LV+VP + L+NW EF+ W PS ++V Y G+ R L+ +K +
Sbjct: 585 KEAYNDNGPHLVVVPATILANWEREFQTWCPSLSIVRYYGNLREREELRYELKKKRPGKD 644
Query: 645 FNVLLTTYEFII--KDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTF-YNSSHRVLL 701
FNV+LTTY + D+ L + + +I+DE +KN K + N F + HR+LL
Sbjct: 645 FNVILTTYNLLFANNDRGFLKRFDYSFLILDEAQNIKNSDSKRYK--NIFKIGAHHRLLL 702
Query: 702 TGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLH 761
TGTPLQN L ELW+LLNFL+P IF S N + +E N ++ I R+
Sbjct: 703 TGTPLQNNLYELWSLLNFLMPHIFGSVKKDNYLLN-------QLLEYNGDDCDSAITRMK 755
Query: 762 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 806
K+L PF+LRRLK V +L K+E++ C + Q Y+++ R
Sbjct: 756 KILSPFILRRLKSTVSKELKPKIEHVEICKLPKFQDETYKNIIER 800
Score = 307 (113.1 bits), Expect = 1.6e-76, Sum P(4) = 1.6e-76
Identities = 75/220 (34%), Positives = 124/220 (56%)
Query: 828 KNTIVQLRKLCNHPFMFQNIEEKYCQH--IGQNNTVVSGPD--IYRTSGKFELLDRILPK 883
+N I L++L + + ++ + C+H +G + PD TS K L IL K
Sbjct: 940 RNDIPSLKELFD-TYSDYDVFKTVCEHEDLGDKYWI---PDEQFIETSTKCLKLKEILAK 995
Query: 884 -FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYF 942
K +VL+F QMT+++ ILED +++ RLDG+T +R ++ F+ E+
Sbjct: 996 EIGVNKSKVLIFSQMTRVLDILEDVLDIFGYNFTRLDGSTPVNERQSIIDHFSSKET-IP 1054
Query: 943 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 1002
+FLLST +GGLG+NL A+ VI +D +NP D QA+DRAHR+GQ+ EV + +L+ N+V
Sbjct: 1055 VFLLSTNSGGLGINLTCANVVIFYDLSFNPQVDRQAEDRAHRLGQEREVIIYKLLAENTV 1114
Query: 1003 EERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTI 1042
+ I +A K +++ V++ G F+ T + L+ +
Sbjct: 1115 DINIHESANQKKKLNDNVLEEGTFNNAETKLQSKNILKIL 1154
Score = 292 (107.8 bits), Expect = 3.3e-36, Sum P(3) = 3.3e-36
Identities = 78/217 (35%), Positives = 123/217 (56%)
Query: 125 KNTIVQLRKLCNHPFMFQNIEEKYCQH--IGQNNTVVSGPD--IYRTSGKFELLDRILPK 180
+N I L++L + + ++ + C+H +G + PD TS K L IL K
Sbjct: 940 RNDIPSLKELFD-TYSDYDVFKTVCEHEDLGDKYWI---PDEQFIETSTKCLKLKEILAK 995
Query: 181 -FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYF 239
K +VL+F QMT+++ ILED +++ RLDG+T +R ++ F+ E+
Sbjct: 996 EIGVNKSKVLIFSQMTRVLDILEDVLDIFGYNFTRLDGSTPVNERQSIIDHFSSKET-IP 1054
Query: 240 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 299
+FLLST +GGLG+NL A+ VI +D +NP D QA+DRAHR+GQ+ EV + +L+ N+V
Sbjct: 1055 VFLLSTNSGGLGINLTCANVVIFYDLSFNPQVDRQAEDRAHRLGQEREVIIYKLLAENTV 1114
Query: 300 EERILAAA--RYKLNMDEKEYHRNNTARTQKLNKAII 334
+ I +A + KLN + E N A T+ +K I+
Sbjct: 1115 DINIHESANQKKKLNDNVLEEGTFNNAETKLQSKNIL 1151
Score = 173 (66.0 bits), Expect = 7.6e-38, Sum P(3) = 7.6e-38
Identities = 40/103 (38%), Positives = 57/103 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFL+P IF S N + +E N ++ I R+ K+
Sbjct: 705 TPLQNNLYELWSLLNFLMPHIFGSVKKDNYLLN-------QLLEYNGDDCDSAITRMKKI 757
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L PF+LRRLK V +L K+E++ C + Q Y+++ R
Sbjct: 758 LSPFILRRLKSTVSKELKPKIEHVEICKLPKFQDETYKNIIER 800
Score = 70 (29.7 bits), Expect = 1.6e-76, Sum P(4) = 1.6e-76
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 814 SEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNI 847
S K K+ G L N ++QLRK NHP + +NI
Sbjct: 882 SIKLKSNGSGQFVLNNILMQLRKAANHPLLCKNI 915
Score = 70 (29.7 bits), Expect = 7.6e-38, Sum P(3) = 7.6e-38
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 111 SEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNI 144
S K K+ G L N ++QLRK NHP + +NI
Sbjct: 882 SIKLKSNGSGQFVLNNILMQLRKAANHPLLCKNI 915
Score = 39 (18.8 bits), Expect = 1.6e-76, Sum P(4) = 1.6e-76
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 501 SKAVGEKKTEDDEYKDAGE 519
+K V + TEDDE ++ E
Sbjct: 360 TKKVDDSDTEDDEEEEEEE 378
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 787 (282.1 bits), Expect = 2.0e-76, Sum P(2) = 2.0e-76
Identities = 222/664 (33%), Positives = 336/664 (50%)
Query: 508 KTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNG---KLKEYQIKGLEWMVSLYNNN 564
K EDDE + T +K E + G +L YQI+G+ W+ +
Sbjct: 689 KVEDDEDRPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQG 748
Query: 565 LNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVV 624
++ ILADEMGLGKT+QT+ L L ++ GP+LV VPLSTL NW EFE WAP +
Sbjct: 749 IDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCI 808
Query: 625 AYKGSPLARRAL--------QGRMKNSKFNVLLTT-YEF-IIKDKSVLSKIQWKCM-IID 673
Y G +R + +G ++ SK + L TT Y+F ++ L + C+ ID
Sbjct: 809 TYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSID 868
Query: 674 EGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQ 733
+ + +L + F+ R+L + T + KL L L +F + +
Sbjct: 869 WAVLVVDEAHRLKSNQSKFF----RILNSYT-IAYKLLLTGTPLQNNLEELFHLLNFLSR 923
Query: 734 -WFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDM 792
FN A GE ++++EE + +RLH++L P +LRRLK +V +P K E+I++ ++
Sbjct: 924 DKFNDLQAFQGEFADVSKEEQV---KRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVEL 980
Query: 793 SGLQKLLYQHLHNRGILLTDGSE--KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEK 850
S +QK Y+ +LT E K+G GG+ +L N ++ L+K CNHP++F + E+
Sbjct: 981 SAMQKKFYK------FILTKNYEALNSKSG-GGSCSLINIMMDLKKCCNHPYLFPSAAEE 1033
Query: 851 YCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 910
G + S + + +GK LL ++L + K HRVL+F QMT+++ ILED+
Sbjct: 1034 ATTAAGGLYEINS---LTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEG 1090
Query: 911 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 970
+ Y R+DG R E + +FN P ++ F+FLLSTRAGGLG+NL ADTVII+DSDW
Sbjct: 1091 EQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDW 1150
Query: 971 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKS 1030
NPH D+QA RAHRIGQ N+V + R +T NSVEER+ A+ K+ + V++ GM + +
Sbjct: 1151 NPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKMMLTHLVVRPGMGGKGA 1210
Query: 1031 --TGSERHEFLQTILHQXXXXXXXXXXXXXX--TVNQLIARTE---DELTLFQKMDAERR 1083
T E + L+ V +L+ RT +E +
Sbjct: 1211 NFTKQELDDILRFGTEDLFKEDDKEEAIHYDDKAVAELLDRTNRGIEEKESWANEYLSSF 1270
Query: 1084 KGETKPRLVEIKELPDWMVKDDDEVENSMY-------XXXXXXXXXXALMGRGSRQRKQV 1136
K + E +E ++K D E + Y +G+G R RKQV
Sbjct: 1271 KVASYATKEEEEEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVGRSLGKGKRVRKQV 1330
Query: 1137 DYTD 1140
+YTD
Sbjct: 1331 NYTD 1334
Score = 570 (205.7 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 121/282 (42%), Positives = 178/282 (63%)
Query: 32 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSG 91
FN A GE ++++EE + +RLH++L P +LRRLK +V +P K E+I++ ++S
Sbjct: 926 FNDLQAFQGEFADVSKEEQV---KRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSA 982
Query: 92 LQKLLYQHLHNRGILLTDGSE--KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYC 149
+QK Y+ +LT E K+G GG+ +L N ++ L+K CNHP++F + E+
Sbjct: 983 MQKKFYK------FILTKNYEALNSKSG-GGSCSLINIMMDLKKCCNHPYLFPSAAEEAT 1035
Query: 150 QHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRD 209
G + S + + +GK LL ++L + K HRVL+F QMT+++ ILED+
Sbjct: 1036 TAAGGLYEINS---LTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQ 1092
Query: 210 FSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNP 269
+ Y R+DG R E + +FN P ++ F+FLLSTRAGGLG+NL ADTVII+DSDWNP
Sbjct: 1093 YKYERIDGGITGTLRQEAIDRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNP 1152
Query: 270 HQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 311
H D+QA RAHRIGQ N+V + R +T NSVEER+ A+ K+
Sbjct: 1153 HNDIQAFSRAHRIGQANKVMIYRFVTRNSVEERVTQVAKRKM 1194
Score = 164 (62.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL F F+ GE ++++EE + +RLH++
Sbjct: 905 TPLQNNLEELFHLLNFLSRDKFNDLQAFQ----------GEFADVSKEEQV---KRLHEM 951
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
L P +LRRLK +V +P K E+I++ ++S +QK Y+ +
Sbjct: 952 LGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFI 991
Score = 40 (19.1 bits), Expect = 2.0e-76, Sum P(2) = 2.0e-76
Identities = 11/53 (20%), Positives = 24/53 (45%)
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
V P ++R +++ + + P K E + + K + +H G+ D +E
Sbjct: 545 VHHPLMIRSFQRKYDMEEPPKFEESLD-EADTRYKRIQRHKDKVGMKANDDAE 596
Score = 39 (18.8 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 1076 QKMDAERRKGETKPRLVEIK 1095
Q+ E G+TKP E+K
Sbjct: 1609 QENPVEEAAGDTKPSDAEVK 1628
Score = 37 (18.1 bits), Expect = 4.1e-76, Sum P(2) = 4.1e-76
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 136 NHPFMFQNIEEKY 148
+HP M ++ + KY
Sbjct: 546 HHPLMIRSFQRKY 558
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 518 (187.4 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 122/304 (40%), Positives = 182/304 (59%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
+LK YQ+ GL W+V L+ N L+GILADEMGLGKT+Q I+ L +L ++ N GP+L+ VP
Sbjct: 428 QLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEG-NHGPHLITVPA 486
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNS--KFNVLLTTYEFII---KDK 659
STL NWV E W PS V+ Y GS R+ ++ + N ++N++++TY I D+
Sbjct: 487 STLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEILNQIVEYNIIVSTYNLAIGNSSDR 546
Query: 660 SVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNF 719
S+ K++ + + DEGH +KN + + L N+ +R+LLTGTPLQN L EL +LLNF
Sbjct: 547 SLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAI-NAKYRLLLTGTPLQNNLLELMSLLNF 605
Query: 720 LLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 779
++P++F S ST + F+ + + + E + +L +++PF+LRR+K EV Q
Sbjct: 606 IMPNMFSS-STSQ--IAKMFSMKSSEEQSSFERDRITHAKL--IMKPFILRRVKSEVLKQ 660
Query: 780 LPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCN 839
LP K E + C MS Q+ LY L ++ L S G R L N ++QLRK+ N
Sbjct: 661 LPAKEEQVEFCAMSERQQELYSALLHK---LKHSSN------GEKRELTNVMMQLRKMSN 711
Query: 840 HPFM 843
HP +
Sbjct: 712 HPLL 715
Score = 327 (120.2 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 68/171 (39%), Positives = 103/171 (60%)
Query: 850 KYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFI 909
+ CQ + D+ SGK LL ++L KE RV++F Q T ++ ILE +
Sbjct: 760 RLCQQYSALHEYQLNTDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLR 819
Query: 910 WRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSD 969
Y RLDG+T DR L+ +FN + F+FLLSTRAGGLG+NL +A+ VI+ D D
Sbjct: 820 HHKHRYNRLDGSTPMSDRIGLIDQFNTDQD-IFVFLLSTRAGGLGINLTSANVVILHDID 878
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKV 1020
NP+ D QA+ R HR+GQ V+V++LI+ +S+E+ +L KL +++++
Sbjct: 879 CNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQEM 929
Score = 326 (119.8 bits), Expect = 9.9e-40, Sum P(2) = 9.9e-40
Identities = 68/170 (40%), Positives = 102/170 (60%)
Query: 147 KYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFI 206
+ CQ + D+ SGK LL ++L KE RV++F Q T ++ ILE +
Sbjct: 760 RLCQQYSALHEYQLNTDVLLDSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLR 819
Query: 207 WRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSD 266
Y RLDG+T DR L+ +FN + F+FLLSTRAGGLG+NL +A+ VI+ D D
Sbjct: 820 HHKHRYNRLDGSTPMSDRIGLIDQFNTDQD-IFVFLLSTRAGGLGINLTSANVVILHDID 878
Query: 267 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEK 316
NP+ D QA+ R HR+GQ V+V++LI+ +S+E+ +L KL ++++
Sbjct: 879 CNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRIGERKLKLEQE 928
Score = 189 (71.6 bits), Expect = 7.7e-40, Sum P(2) = 7.7e-40
Identities = 53/140 (37%), Positives = 78/140 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL +LLNF++P++F S ST + F+ + + + E + +L +
Sbjct: 590 TPLQNNLLELMSLLNFIMPNMFSS-STSQ--IAKMFSMKSSEEQSSFERDRITHAKL--I 644
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
++PF+LRR+K EV QLP K E + C MS Q+ LY L ++ L S G
Sbjct: 645 MKPFILRRVKSEVLKQLPAKEEQVEFCAMSERQQELYSALLHK---LKHSSN------GE 695
Query: 121 ARALKNTIVQLRKLCNHPFM 140
R L N ++QLRK+ NHP +
Sbjct: 696 KRELTNVMMQLRKMSNHPLL 715
Score = 39 (18.8 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 546 LKEYQIKGL-EWMVSLYNNNLN-GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
L ++++ L + +L+ LN +L D GK ++LLT L+ K G +V+
Sbjct: 753 LSDFELHRLCQQYSALHEYQLNTDVLLDS---GK----LSLLTQLLNSLKEKGDRVVLFS 805
Query: 604 LSTLSNWVLE 613
T+ +LE
Sbjct: 806 QFTMMLDILE 815
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 455 (165.2 bits), Expect = 2.8e-75, Sum P(2) = 2.8e-75
Identities = 97/215 (45%), Positives = 139/215 (64%)
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
L+N ++ LRK CNHP+M + + Q + +V+ SGKF +LDR+LP+ K+
Sbjct: 216 LQNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKK 269
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 945
H+VL+F QMT ++ IL DY R+F++ RLDG+ +R + + FN +PE F+FL
Sbjct: 270 RCHKVLVFSQMTSMLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFNTDPE--VFLFL 327
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 328 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 387
Query: 1006 ILAAARYKLNMDEKVIQAGMFDQKSTG-SERHEFL 1039
I+ A K +++ +I F +G S+ FL
Sbjct: 388 IVERAAAKRKLEKLIIHKNHFKGGQSGLSQSKNFL 422
Score = 451 (163.8 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 93/200 (46%), Positives = 134/200 (67%)
Query: 124 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 183
L+N ++ LRK CNHP+M + + Q + +V+ SGKF +LDR+LP+ K+
Sbjct: 216 LQNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTN------SGKFLILDRMLPELKK 269
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN-EPESKYFIFL 242
H+VL+F QMT ++ IL DY R+F++ RLDG+ +R + + FN +PE F+FL
Sbjct: 270 RCHKVLVFSQMTSMLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFNTDPE--VFLFL 327
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
+STRAGGLG+NL AADTVII+DSDWNP DLQAQDR HRIGQ V V RL+T N+++++
Sbjct: 328 VSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQK 387
Query: 303 ILAAARYKLNMDEKEYHRNN 322
I+ A K +++ H+N+
Sbjct: 388 IVERAAAKRKLEKLIIHKNH 407
Score = 344 (126.2 bits), Expect = 2.8e-75, Sum P(2) = 2.8e-75
Identities = 78/205 (38%), Positives = 115/205 (56%)
Query: 667 WKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFK 726
WK +I+DEGHR+KN C+L + L F N+ +++LLTGTPLQN L ELW+LLNFLLP +F
Sbjct: 4 WKYLIVDEGHRIKNMKCRLIRELKRF-NADNKLLLTGTPLQNNLSELWSLLNFLLPDVFD 62
Query: 727 SCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE 785
+FE WF+ + T E + E E ++ LH++L PFLLRRLK +V ++P K E
Sbjct: 63 DLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQILTPFLLRRLKSDVALEVPPKRE 121
Query: 786 YIIKCDMSGLQKLLYQHLHNRGILLTDGS-EK-----GKTGEGGARALKNTIVQLRKLCN 839
++ + Q++ Y + NR I GS EK TG R+ K+ + +L
Sbjct: 122 VVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPTGRPKRRSRKS--INYSELDQ 179
Query: 840 HPFMFQNIEEKYCQHIGQNNTVVSG 864
P + + + + + TVV G
Sbjct: 180 FPSELEKLISQIQPEVKRERTVVEG 204
Score = 238 (88.8 bits), Expect = 4.1e-64, Sum P(2) = 4.1e-64
Identities = 59/168 (35%), Positives = 87/168 (51%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN-APFATTGEKVELNEEETILIIRRLHK 59
TPLQN L ELW+LLNFLLP +F +FE WF+ + T E + E E ++ LH+
Sbjct: 40 TPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSLSETAEDIIAKEREQN-VLHMLHQ 98
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGS-EK----- 113
+L PFLLRRLK +V ++P K E ++ + Q++ Y + NR I GS EK
Sbjct: 99 ILTPFLLRRLKSDVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVEL 158
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSG 161
TG R+ K+ + +L P + + + + + TVV G
Sbjct: 159 SPTGRPKRRSRKS--INYSELDQFPSELEKLISQIQPEVKRERTVVEG 204
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 770 (276.1 bits), Expect = 6.7e-75, Sum P(3) = 6.7e-75
Identities = 189/538 (35%), Positives = 300/538 (55%)
Query: 502 KAVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLY 561
+A G ED++ K E+ + VTE GKL YQ++GL W+ +
Sbjct: 563 EAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTE-----TGGKLHPYQLEGLNWLRHCW 617
Query: 562 NNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSA 621
+N + ILADEMGLGKTVQ++ L LM++ GP+L+ PLST+ NW E E+W P
Sbjct: 618 SNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDF 677
Query: 622 NVVAYKGSPLARRAL--------QGRMKNS-KFNVLLTT----YEFIIKDKSVLSKIQWK 668
VV Y G AR L +G +++ K + + TT + ++ ++ +
Sbjct: 678 YVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTI 737
Query: 669 CMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSC 728
I+ G + + +L + F+ + + + L P L N L +F
Sbjct: 738 LSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP----LQNNL-EELFHLL 792
Query: 729 STF-EQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYI 787
+ ++ FN A T E E+++E+ I +LH +L P +LRRLK +V + +P K E I
Sbjct: 793 NFLSKERFNQLEAFTAEFNEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKSELI 849
Query: 788 IKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNI 847
++ ++S +QK Y+++ R D K G G +L N +++L+K CNHP++F
Sbjct: 850 VRVELSAMQKKWYKNILTRNF---DALNV-KNG-GTQMSLMNVLMELKKCCNHPYLFVKA 904
Query: 848 EEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDY 907
E + + + N + G + + SGKF LL ++L K K+ HRVL+F QMT+++ I+ED
Sbjct: 905 ELEAPK---EKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDL 961
Query: 908 FIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFD 967
+ + Y R+DG+ + R + + ++N P ++ FIFLLSTRAGGLG+NL ADTVII+D
Sbjct: 962 CEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYD 1021
Query: 968 SDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGM 1025
SDWNPH D+QA RAHR+GQK++V + R +T SVEE+I + A+ K+ ++ V++AG+
Sbjct: 1022 SDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGL 1079
Score = 565 (203.9 bits), Expect = 4.5e-51, Sum P(2) = 4.5e-51
Identities = 118/280 (42%), Positives = 180/280 (64%)
Query: 32 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSG 91
FN A T E E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S
Sbjct: 800 FNQLEAFTAEFNEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSA 856
Query: 92 LQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 151
+QK Y+++ R D K G G +L N +++L+K CNHP++F E + +
Sbjct: 857 MQKKWYKNILTRNF---DALNV-KNG-GTQMSLMNVLMELKKCCNHPYLFVKAELEAPK- 910
Query: 152 IGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFS 211
+ N + G + + SGKF LL ++L K K+ HRVL+F QMT+++ I+ED + +
Sbjct: 911 --EKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYR 968
Query: 212 YLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ 271
Y R+DG+ + R + + ++N P ++ FIFLLSTRAGGLG+NL ADTVII+DSDWNPH
Sbjct: 969 YERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHN 1028
Query: 272 DLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 311
D+QA RAHR+GQK++V + R +T SVEE+I + A+ K+
Sbjct: 1029 DIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKM 1068
Score = 155 (59.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 39/103 (37%), Positives = 58/103 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL F F FN E+++E+ I +LH +
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFN----------EISKEDQI---EKLHNL 825
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V + +P K E I++ ++S +QK Y+++ R
Sbjct: 826 LGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTR 868
Score = 58 (25.5 bits), Expect = 6.7e-75, Sum P(3) = 6.7e-75
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 1075 FQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVENSM-YXXXXXXXXXXALMGRGSRQR 1133
+Q + E ++ E + IKE D D D E + + +G+G R R
Sbjct: 1170 YQTKETEGQEEEEEEETEVIKE--DEKEPDPDYWEKLLKHHYEQDREIELQKLGKGKRVR 1227
Query: 1134 KQVDYTDSLTDQEWLK 1149
KQ++Y +W K
Sbjct: 1228 KQINYASENMGTDWSK 1243
Score = 46 (21.3 bits), Expect = 8.2e-50, Sum P(2) = 8.2e-50
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 500 PSKAVGEKKTE-DDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMV 558
P+ GE+K E +EY + + A+Y + E+ E+ + ++ KE E ++
Sbjct: 1146 PAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLL 1205
Query: 559 SLYNNNLNGILADEMGLGKTVQ 580
+ I ++G GK V+
Sbjct: 1206 KHHYEQDREIELQKLGKGKRVR 1227
Score = 38 (18.4 bits), Expect = 6.7e-75, Sum P(3) = 6.7e-75
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 507 KKTEDDEYKDAGEEA 521
++TE++E ++ G+EA
Sbjct: 27 EETEEEEEQEQGDEA 41
Score = 38 (18.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 23/106 (21%), Positives = 39/106 (36%)
Query: 218 TTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQD 277
T ED E NE S + + T+ + +T +I + + P D +
Sbjct: 1145 TPAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKL 1204
Query: 278 RAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
H Q E+ + +L V ++I A+ NM +N T
Sbjct: 1205 LKHHYEQDREIELQKLGKGKRVRKQINYASE---NMGTDWSKQNQT 1247
Score = 37 (18.1 bits), Expect = 7.3e-49, Sum P(2) = 7.3e-49
Identities = 18/86 (20%), Positives = 32/86 (37%)
Query: 921 TTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQD 980
T ED E NE S + + T+ + +T +I + + P D +
Sbjct: 1145 TPAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKL 1204
Query: 981 RAHRIGQKNEVRVLRLITVNSVEERI 1006
H Q E+ + +L V ++I
Sbjct: 1205 LKHHYEQDREIELQKLGKGKRVRKQI 1230
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 770 (276.1 bits), Expect = 6.7e-75, Sum P(3) = 6.7e-75
Identities = 189/538 (35%), Positives = 300/538 (55%)
Query: 502 KAVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLY 561
+A G ED++ K E+ + VTE GKL YQ++GL W+ +
Sbjct: 563 EAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTE-----TGGKLHPYQLEGLNWLRHCW 617
Query: 562 NNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSA 621
+N + ILADEMGLGKTVQ++ L LM++ GP+L+ PLST+ NW E E+W P
Sbjct: 618 SNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDF 677
Query: 622 NVVAYKGSPLARRAL--------QGRMKNS-KFNVLLTT----YEFIIKDKSVLSKIQWK 668
VV Y G AR L +G +++ K + + TT + ++ ++ +
Sbjct: 678 YVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTI 737
Query: 669 CMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSC 728
I+ G + + +L + F+ + + + L P L N L +F
Sbjct: 738 LSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP----LQNNL-EELFHLL 792
Query: 729 STF-EQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYI 787
+ ++ FN A T E E+++E+ I +LH +L P +LRRLK +V + +P K E I
Sbjct: 793 NFLSKERFNQLEAFTAEFNEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKSELI 849
Query: 788 IKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNI 847
++ ++S +QK Y+++ R D K G G +L N +++L+K CNHP++F
Sbjct: 850 VRVELSAMQKKWYKNILTRNF---DALNV-KNG-GTQMSLMNVLMELKKCCNHPYLFVKA 904
Query: 848 EEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDY 907
E + + + N + G + + SGKF LL ++L K K+ HRVL+F QMT+++ I+ED
Sbjct: 905 ELEAPK---EKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDL 961
Query: 908 FIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFD 967
+ + Y R+DG+ + R + + ++N P ++ FIFLLSTRAGGLG+NL ADTVII+D
Sbjct: 962 CEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYD 1021
Query: 968 SDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGM 1025
SDWNPH D+QA RAHR+GQK++V + R +T SVEE+I + A+ K+ ++ V++AG+
Sbjct: 1022 SDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGL 1079
Score = 565 (203.9 bits), Expect = 4.5e-51, Sum P(2) = 4.5e-51
Identities = 118/280 (42%), Positives = 180/280 (64%)
Query: 32 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSG 91
FN A T E E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S
Sbjct: 800 FNQLEAFTAEFNEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSA 856
Query: 92 LQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 151
+QK Y+++ R D K G G +L N +++L+K CNHP++F E + +
Sbjct: 857 MQKKWYKNILTRNF---DALNV-KNG-GTQMSLMNVLMELKKCCNHPYLFVKAELEAPK- 910
Query: 152 IGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFS 211
+ N + G + + SGKF LL ++L K K+ HRVL+F QMT+++ I+ED + +
Sbjct: 911 --EKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYR 968
Query: 212 YLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ 271
Y R+DG+ + R + + ++N P ++ FIFLLSTRAGGLG+NL ADTVII+DSDWNPH
Sbjct: 969 YERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHN 1028
Query: 272 DLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 311
D+QA RAHR+GQK++V + R +T SVEE+I + A+ K+
Sbjct: 1029 DIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKM 1068
Score = 155 (59.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 39/103 (37%), Positives = 58/103 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL F F FN E+++E+ I +LH +
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFN----------EISKEDQI---EKLHNL 825
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V + +P K E I++ ++S +QK Y+++ R
Sbjct: 826 LGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTR 868
Score = 58 (25.5 bits), Expect = 6.7e-75, Sum P(3) = 6.7e-75
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 1075 FQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVENSM-YXXXXXXXXXXALMGRGSRQR 1133
+Q + E ++ E + IKE D D D E + + +G+G R R
Sbjct: 1170 YQTKETEGQEEEEEEETEVIKE--DEKEPDPDYWEKLLKHHYEQDREIELQKLGKGKRVR 1227
Query: 1134 KQVDYTDSLTDQEWLK 1149
KQ++Y +W K
Sbjct: 1228 KQINYASENMGTDWSK 1243
Score = 46 (21.3 bits), Expect = 8.2e-50, Sum P(2) = 8.2e-50
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 500 PSKAVGEKKTE-DDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMV 558
P+ GE+K E +EY + + A+Y + E+ E+ + ++ KE E ++
Sbjct: 1146 PAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKLL 1205
Query: 559 SLYNNNLNGILADEMGLGKTVQ 580
+ I ++G GK V+
Sbjct: 1206 KHHYEQDREIELQKLGKGKRVR 1227
Score = 38 (18.4 bits), Expect = 6.7e-75, Sum P(3) = 6.7e-75
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 507 KKTEDDEYKDAGEEA 521
++TE++E ++ G+EA
Sbjct: 27 EETEEEEEQEQGDEA 41
Score = 38 (18.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 23/106 (21%), Positives = 39/106 (36%)
Query: 218 TTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQD 277
T ED E NE S + + T+ + +T +I + + P D +
Sbjct: 1145 TPAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKL 1204
Query: 278 RAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNT 323
H Q E+ + +L V ++I A+ NM +N T
Sbjct: 1205 LKHHYEQDREIELQKLGKGKRVRKQINYASE---NMGTDWSKQNQT 1247
Score = 37 (18.1 bits), Expect = 7.3e-49, Sum P(2) = 7.3e-49
Identities = 18/86 (20%), Positives = 32/86 (37%)
Query: 921 TTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQD 980
T ED E NE S + + T+ + +T +I + + P D +
Sbjct: 1145 TPAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDYWEKL 1204
Query: 981 RAHRIGQKNEVRVLRLITVNSVEERI 1006
H Q E+ + +L V ++I
Sbjct: 1205 LKHHYEQDREIELQKLGKGKRVRKQI 1230
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 493 (178.6 bits), Expect = 2.2e-74, Sum P(4) = 2.2e-74
Identities = 113/297 (38%), Positives = 168/297 (56%)
Query: 541 MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
++ G L+ YQ +GL W+ SLYNNN NGILADEMGLGKT+QTI+LL YL + GP+L+
Sbjct: 818 LLRGTLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHLI 877
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLAR-RALQGRMKNSKFNVLLTTYEFIIKDK 659
IVP S + NW +EF+K+AP V+ Y GSP R + +G K F+V +T+Y+ +++D+
Sbjct: 878 IVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWNKPDAFHVCITSYQLVVQDQ 937
Query: 660 SVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNF 719
+ +W MI+DE H +KN + L F N+ +R+LLTGTPLQN L ELW+LL F
Sbjct: 938 QSFKRRRWTYMILDEAHNIKNFRSTRWRALLNF-NTENRLLLTGTPLQNNLMELWSLLYF 996
Query: 720 LLPSI---------FKSCSTFEQWFNAPFATTGEKVELNEEETI----LIIRRLHKVLRP 766
L+PS F + F+QWF P E+ + I +++ + R
Sbjct: 997 LMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKMDEETRN 1056
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSG-LQKLLYQHLHNRG-ILLTDGSEKGKTGE 821
+ RL + + L +++ ++ M G + ++Y L R L D + KT E
Sbjct: 1057 -TVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRAKTKE 1112
Score = 367 (134.2 bits), Expect = 2.2e-74, Sum P(4) = 2.2e-74
Identities = 77/176 (43%), Positives = 104/176 (59%)
Query: 854 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 910
H Q ++ PD + GK + L +L + HR L+F QMT+++ ILE +
Sbjct: 1345 HKAQVKLSIAFPDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNI 1404
Query: 911 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 970
+ Y+RLDG TK EDR L KFN + K +F+LSTR+GGLG+NL ADTVI +DSDW
Sbjct: 1405 HGYRYMRLDGATKIEDRQLLTEKFNR-DPKIPVFILSTRSGGLGINLTGADTVIFYDSDW 1463
Query: 971 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF 1026
NP D Q QDR HRIGQ +V + R ++ ++E I+ A K +D VIQ G F
Sbjct: 1464 NPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGEF 1519
Score = 347 (127.2 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 72/167 (43%), Positives = 99/167 (59%)
Query: 151 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 207
H Q ++ PD + GK + L +L + HR L+F QMT+++ ILE +
Sbjct: 1345 HKAQVKLSIAFPDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNI 1404
Query: 208 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 267
+ Y+RLDG TK EDR L KFN + K +F+LSTR+GGLG+NL ADTVI +DSDW
Sbjct: 1405 HGYRYMRLDGATKIEDRQLLTEKFNR-DPKIPVFILSTRSGGLGINLTGADTVIFYDSDW 1463
Query: 268 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
NP D Q QDR HRIGQ +V + R ++ ++E I+ A K +D
Sbjct: 1464 NPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLD 1510
Score = 218 (81.8 bits), Expect = 4.1e-45, Sum P(4) = 4.1e-45
Identities = 53/144 (36%), Positives = 77/144 (53%)
Query: 14 LNFLLPSIFKSCSTFEQWFNAPF--------ATTGEKVELNE-------EETILIIRRLH 58
+N +P F + F+QWF P A + ++ NE EET + RLH
Sbjct: 1003 VNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKMDEETRNTVARLH 1062
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
+VLRP+LLRRLKK+VE Q+P K E+I+ C +S Q+ LY +R K
Sbjct: 1063 QVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRA------KTKETLAS 1116
Query: 119 GGARALKNTIVQLRKLCNHPFMFQ 142
G ++ N ++QLRK+CNHP +F+
Sbjct: 1117 GNFLSIINCLMQLRKVCNHPDLFE 1140
Score = 218 (81.8 bits), Expect = 6.7e-45, Sum P(4) = 6.7e-45
Identities = 53/144 (36%), Positives = 77/144 (53%)
Query: 717 LNFLLPSIFKSCSTFEQWFNAPF--------ATTGEKVELNE-------EETILIIRRLH 761
+N +P F + F+QWF P A + ++ NE EET + RLH
Sbjct: 1003 VNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLIDENERTTQKMDEETRNTVARLH 1062
Query: 762 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 821
+VLRP+LLRRLKK+VE Q+P K E+I+ C +S Q+ LY +R K
Sbjct: 1063 QVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFMSRA------KTKETLAS 1116
Query: 822 GGARALKNTIVQLRKLCNHPFMFQ 845
G ++ N ++QLRK+CNHP +F+
Sbjct: 1117 GNFLSIINCLMQLRKVCNHPDLFE 1140
Score = 100 (40.3 bits), Expect = 6.1e-33, Sum P(4) = 6.1e-33
Identities = 37/133 (27%), Positives = 59/133 (44%)
Query: 1 TPLQNKLPELWALLNFLLPSI---------FKSCSTFEQWFNAPFATTGEKVELNEEETI 51
TPLQN L ELW+LL FL+PS F + F+QWF P E+ + I
Sbjct: 981 TPLQNNLMELWSLLYFLMPSSKVNQAMPEGFANLDDFQQWFGKPVNRILEQTSAGNSDLI 1040
Query: 52 ----LIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSG-LQKLLYQHLHNRG-I 105
+++ + R + RL + + L +++ ++ M G + ++Y L R
Sbjct: 1041 DENERTTQKMDEETRN-TVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRF 1099
Query: 106 LLTDGSEKGKTGE 118
L D + KT E
Sbjct: 1100 LYDDFMSRAKTKE 1112
Score = 47 (21.6 bits), Expect = 4.1e-45, Sum P(4) = 4.1e-45
Identities = 6/19 (31%), Positives = 17/19 (89%)
Query: 770 RRLKKEVESQLPEKVEYII 788
+RL++E ++++ EK+E+++
Sbjct: 1234 QRLRREEQAEIKEKLEHVV 1252
Score = 47 (21.6 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 6/19 (31%), Positives = 17/19 (89%)
Query: 67 RRLKKEVESQLPEKVEYII 85
+RL++E ++++ EK+E+++
Sbjct: 1234 QRLRREEQAEIKEKLEHVV 1252
Score = 44 (20.5 bits), Expect = 2.2e-74, Sum P(4) = 2.2e-74
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 446 VKETNSDNKLRGEDAPPAKQIKEWLAS 472
VK+ + LRG P KQ WLAS
Sbjct: 810 VKDVPIPSLLRGTLRPYQKQGLNWLAS 836
Score = 40 (19.1 bits), Expect = 2.2e-74, Sum P(4) = 2.2e-74
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 70 KKEVESQLPE-KVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 123
K++V +Q E K+ II D + LYQ + I+ D E + G +A
Sbjct: 47 KRKVSTQSKEDKLSDII-VDFNLAVNELYQLKEYKSIISWDPIENSSANDRGIKA 100
Score = 40 (19.1 bits), Expect = 8.5e-28, Sum P(2) = 8.5e-28
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 773 KKEVESQLPE-KVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
K++V +Q E K+ II D + LYQ + I+ D E + G +A
Sbjct: 47 KRKVSTQSKEDKLSDII-VDFNLAVNELYQLKEYKSIISWDPIENSSANDRGIKA 100
Score = 39 (18.8 bits), Expect = 4.1e-45, Sum P(4) = 4.1e-45
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 687 QTLNTFYNSSHRVLLTGTPLQNKLPELWALL 717
+ +N F S L+T P Q+++ +L LL
Sbjct: 1188 ENMNYFVCQSTGKLMTTEPFQDQINKLKILL 1218
Score = 37 (18.1 bits), Expect = 3.4e-26, Sum P(5) = 3.4e-26
Identities = 18/85 (21%), Positives = 37/85 (43%)
Query: 126 NTIVQLRKLCNHPFMFQNIEEKYCQHIGQN--NTVVSGPDIYRTSGKFELLDRILPKFKE 183
N I++ N + +N E+ Q + + NTV + R L + + K
Sbjct: 1026 NRILEQTSAGNSDLIDEN--ERTTQKMDEETRNTVARLHQVLRPY-LLRRLKKDVEKQMP 1082
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWR 208
K+ +++C++++ L D F+ R
Sbjct: 1083 GKYEHIVYCRLSKRQRFLYDDFMSR 1107
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 732 (262.7 bits), Expect = 1.7e-73, Sum P(2) = 1.7e-73
Identities = 181/509 (35%), Positives = 272/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQTI L L ++ + GPYLV P
Sbjct: 81 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 140
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K V
Sbjct: 141 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQI 200
Query: 664 KIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
K ++ + ID+ C + + N+ + +L + KL
Sbjct: 201 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 260
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 261 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 317
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+ + R + G G +L N ++ L
Sbjct: 318 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMMDL 372
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + N + G + ++SGK LL ++L K ++ HRVL+F
Sbjct: 373 KKCCNHPYLFPVAAVE--APVLPNGSY-DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIF 429
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 430 SQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 489
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K+
Sbjct: 490 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 549
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ KS GS + L IL
Sbjct: 550 MLTHLVVRPGL-GSKS-GSMTKQELDDIL 576
Score = 524 (189.5 bits), Expect = 2.5e-48, Sum P(3) = 2.5e-48
Identities = 110/271 (40%), Positives = 166/271 (61%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 290 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 346
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R + G G +L N ++ L+K CNHP++F + + N +
Sbjct: 347 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE--APVLPNGSY-D 398
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K ++ HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 399 GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT 458
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAH
Sbjct: 459 GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 518
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKL 311
RIGQ +V + R +T SVEERI A+ K+
Sbjct: 519 RIGQNKKVMIYRFVTRASVEERITQVAKRKM 549
Score = 155 (59.6 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 260 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 306
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R
Sbjct: 307 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 349
Score = 70 (29.7 bits), Expect = 1.7e-73, Sum P(2) = 1.7e-73
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S DQEW
Sbjct: 722 LGKGKRIRKQVNYNDASQEDQEW 744
Score = 40 (19.1 bits), Expect = 2.5e-48, Sum P(3) = 2.5e-48
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
D+ KL+D+ +D L +EY+S+
Sbjct: 641 DDAAISKLLDRNQDATDDTELQNMNEYLSS 670
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 757 (271.5 bits), Expect = 4.8e-73, Sum P(2) = 4.8e-73
Identities = 189/540 (35%), Positives = 289/540 (53%)
Query: 501 SKAVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSL 560
+K +G K +DE ++ I Y +V G L YQ++G+ W+
Sbjct: 576 AKGLGPK---EDEVTSRRKKREKIDILKKY--EVQPDFISETGGNLHPYQLEGINWLRHC 630
Query: 561 YNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPS 620
++N + ILADEMGLGKTVQ++ L LM++ GP+L+ PLST+ NW E E W P
Sbjct: 631 WSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPD 690
Query: 621 ANVVAYKGSPLARR------------ALQGRMKNSKFNVLLTT-YEFIIKDKSVLSKIQW 667
VV Y G +R A++G K SK L + ++ ++ +
Sbjct: 691 FYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKA 750
Query: 668 KCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKS 727
ID + + +L +TF+ + + L P L N L +F
Sbjct: 751 ILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTP----LQNNL-EELFHL 805
Query: 728 CSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 786
+ FN + T E E+++E+ I +LH +L P +LRRLK +V + +P K E
Sbjct: 806 LNFLAPDRFNQLESFTAEFSEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKQEL 862
Query: 787 IIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQN 846
I++ ++S +QK Y+++ R D K G G +L N I++L+K CNHP++F
Sbjct: 863 IVRVELSAMQKKYYKNILTRNF---DALNV-KNG-GTQMSLINIIMELKKCCNHPYLFM- 916
Query: 847 IEEKYCQHIGQ-NNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILE 905
K C + N + G + + +GKF LL ++L K K+ HRVL+F QMT ++ ILE
Sbjct: 917 ---KACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILE 973
Query: 906 DYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVII 965
D+ + Y R+DG+ + R + + ++N P +K F+FLLSTRAGGLG+NL ADTVII
Sbjct: 974 DFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVII 1033
Query: 966 FDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGM 1025
+DSDWNPH D+QA RAHR+GQK++V + R +T SVEERI + A+ K+ + V++AG+
Sbjct: 1034 YDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGL 1093
Score = 569 (205.4 bits), Expect = 2.4e-51, Sum P(2) = 2.4e-51
Identities = 120/281 (42%), Positives = 178/281 (63%)
Query: 32 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSG 91
FN + T E E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S
Sbjct: 814 FNQLESFTAEFSEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSA 870
Query: 92 LQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 151
+QK Y+++ R D K G G +L N I++L+K CNHP++F K C
Sbjct: 871 MQKKYYKNILTRNF---DALNV-KNG-GTQMSLINIIMELKKCCNHPYLFM----KACLE 921
Query: 152 IGQ-NNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDF 210
+ N + G + + +GKF LL ++L K K+ HRVL+F QMT ++ ILED+ +
Sbjct: 922 APKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGY 981
Query: 211 SYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 270
Y R+DG+ + R + + ++N P +K F+FLLSTRAGGLG+NL ADTVII+DSDWNPH
Sbjct: 982 KYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPH 1041
Query: 271 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 311
D+QA RAHR+GQK++V + R +T SVEERI + A+ K+
Sbjct: 1042 NDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKM 1082
Score = 164 (62.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 40/103 (38%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F +F T E E+++E+ I +LH +
Sbjct: 793 TPLQNNLEELFHLLNFLAPDRFNQLESF----------TAEFSEISKEDQI---EKLHNL 839
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V + +P K E I++ ++S +QK Y+++ R
Sbjct: 840 LGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTR 882
Score = 56 (24.8 bits), Expect = 4.8e-73, Sum P(2) = 4.8e-73
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQEW 1147
+G+G R R+QV+Y Q+W
Sbjct: 1233 LGKGKRVRRQVNYASENMGQDW 1254
Score = 38 (18.4 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 919 DGTTKSEDRGELLRKFNEPESK 940
DG+ D GELL+ + E +
Sbjct: 1266 DGSEYGSDNGELLQTDEDYEER 1287
Score = 38 (18.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 216 DGTTKSEDRGELLRKFNEPESK 237
DG+ D GELL+ + E +
Sbjct: 1266 DGSEYGSDNGELLQTDEDYEER 1287
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 757 (271.5 bits), Expect = 4.8e-73, Sum P(2) = 4.8e-73
Identities = 189/540 (35%), Positives = 289/540 (53%)
Query: 501 SKAVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSL 560
+K +G K +DE ++ I Y +V G L YQ++G+ W+
Sbjct: 576 AKGLGPK---EDEVTSRRKKREKIDILKKY--EVQPDFISETGGNLHPYQLEGINWLRHC 630
Query: 561 YNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPS 620
++N + ILADEMGLGKTVQ++ L LM++ GP+L+ PLST+ NW E E W P
Sbjct: 631 WSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPD 690
Query: 621 ANVVAYKGSPLARR------------ALQGRMKNSKFNVLLTT-YEFIIKDKSVLSKIQW 667
VV Y G +R A++G K SK L + ++ ++ +
Sbjct: 691 FYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKA 750
Query: 668 KCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKS 727
ID + + +L +TF+ + + L P L N L +F
Sbjct: 751 ILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTP----LQNNL-EELFHL 805
Query: 728 CSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 786
+ FN + T E E+++E+ I +LH +L P +LRRLK +V + +P K E
Sbjct: 806 LNFLAPDRFNQLESFTAEFSEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKQEL 862
Query: 787 IIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQN 846
I++ ++S +QK Y+++ R D K G G +L N I++L+K CNHP++F
Sbjct: 863 IVRVELSAMQKKYYKNILTRNF---DALNV-KNG-GTQMSLINIIMELKKCCNHPYLFM- 916
Query: 847 IEEKYCQHIGQ-NNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILE 905
K C + N + G + + +GKF LL ++L K K+ HRVL+F QMT ++ ILE
Sbjct: 917 ---KACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILE 973
Query: 906 DYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVII 965
D+ + Y R+DG+ + R + + ++N P +K F+FLLSTRAGGLG+NL ADTVII
Sbjct: 974 DFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVII 1033
Query: 966 FDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGM 1025
+DSDWNPH D+QA RAHR+GQK++V + R +T SVEERI + A+ K+ + V++AG+
Sbjct: 1034 YDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVVRAGL 1093
Score = 569 (205.4 bits), Expect = 2.4e-51, Sum P(2) = 2.4e-51
Identities = 120/281 (42%), Positives = 178/281 (63%)
Query: 32 FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSG 91
FN + T E E+++E+ I +LH +L P +LRRLK +V + +P K E I++ ++S
Sbjct: 814 FNQLESFTAEFSEISKEDQI---EKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSA 870
Query: 92 LQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 151
+QK Y+++ R D K G G +L N I++L+K CNHP++F K C
Sbjct: 871 MQKKYYKNILTRNF---DALNV-KNG-GTQMSLINIIMELKKCCNHPYLFM----KACLE 921
Query: 152 IGQ-NNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDF 210
+ N + G + + +GKF LL ++L K K+ HRVL+F QMT ++ ILED+ +
Sbjct: 922 APKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGY 981
Query: 211 SYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPH 270
Y R+DG+ + R + + ++N P +K F+FLLSTRAGGLG+NL ADTVII+DSDWNPH
Sbjct: 982 KYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPH 1041
Query: 271 QDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 311
D+QA RAHR+GQK++V + R +T SVEERI + A+ K+
Sbjct: 1042 NDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITSVAKKKM 1082
Score = 164 (62.8 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 40/103 (38%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F +F T E E+++E+ I +LH +
Sbjct: 793 TPLQNNLEELFHLLNFLAPDRFNQLESF----------TAEFSEISKEDQI---EKLHNL 839
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V + +P K E I++ ++S +QK Y+++ R
Sbjct: 840 LGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTR 882
Score = 56 (24.8 bits), Expect = 4.8e-73, Sum P(2) = 4.8e-73
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQEW 1147
+G+G R R+QV+Y Q+W
Sbjct: 1233 LGKGKRVRRQVNYASENMGQDW 1254
Score = 38 (18.4 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 919 DGTTKSEDRGELLRKFNEPESK 940
DG+ D GELL+ + E +
Sbjct: 1266 DGSEYGSDNGELLQTDEDYEER 1287
Score = 38 (18.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 216 DGTTKSEDRGELLRKFNEPESK 237
DG+ D GELL+ + E +
Sbjct: 1266 DGSEYGSDNGELLQTDEDYEER 1287
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 480 (174.0 bits), Expect = 7.3e-73, Sum P(3) = 7.3e-73
Identities = 122/335 (36%), Positives = 178/335 (53%)
Query: 527 AHTY---HEKVTE---QASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTV 579
AHT E+ TE Q ++ G L +YQ+ G++W++ +YN +LN IL DEMGLGKT+
Sbjct: 368 AHTVTKDFERCTEGPLQLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTI 427
Query: 580 QTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGR 639
Q +A L+YL + K GP+L++VP ST+ NW+ EF KW PS ++ Y GS R+ L+ R
Sbjct: 428 QIVAFLSYLKQIGKT-GPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHR 486
Query: 640 MKNSK--FNVLLTTYEFIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYN 694
+K K +V+LTTY + DK +I DEGH +KN + + L
Sbjct: 487 VKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKV-K 545
Query: 695 SSHRVLLTGTPLQNKLPELWALLNFLLPSIF-KSCSTFE---QWFN--APFATTGEKVEL 748
++LLTGTPLQN L EL +L+ F+L +F K C Q F P T K
Sbjct: 546 GKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALY 605
Query: 749 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 808
++ I +L+P++LRRLK +V LP K E II+ +M QK LY ++
Sbjct: 606 QQDR----IEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEA-- 659
Query: 809 LLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFM 843
L E G + ++++LR+ NHP +
Sbjct: 660 -LQQSEESGDS--------YGSLMRLRQAANHPLL 685
Score = 350 (128.3 bits), Expect = 7.3e-73, Sum P(3) = 7.3e-73
Identities = 75/169 (44%), Positives = 110/169 (65%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK E LD +LP+ ++ +VL+F Q T ++ ILE Y R +SY RLDG T DR E+
Sbjct: 752 SGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEM 811
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ +FN + F+FLLSTRAGGLG+NL +A+ +II D D+NP+ D QA+DR HR+GQ+
Sbjct: 812 INEFNLSKD-LFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKP 870
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQA--GMFDQKSTGSERHE 1037
V V RL++ +VE +LA A+ KL ++++V G D+ + + E
Sbjct: 871 VHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDEDALRELKEE 919
Score = 343 (125.8 bits), Expect = 5.2e-37, Sum P(2) = 5.2e-37
Identities = 71/149 (47%), Positives = 103/149 (69%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK E LD +LP+ ++ +VL+F Q T ++ ILE Y R +SY RLDG T DR E+
Sbjct: 752 SGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEM 811
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ +FN + F+FLLSTRAGGLG+NL +A+ +II D D+NP+ D QA+DR HR+GQ+
Sbjct: 812 INEFNLSKD-LFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKP 870
Query: 288 VRVLRLITVNSVEERILAAARYKLNMDEK 316
V V RL++ +VE +LA A+ KL ++++
Sbjct: 871 VHVTRLVSKGTVEVGMLALAKKKLQLEKQ 899
Score = 146 (56.5 bits), Expect = 8.9e-38, Sum P(2) = 8.9e-38
Identities = 47/146 (32%), Positives = 69/146 (47%)
Query: 1 TPLQNKLPELWALLNFLLPSIF-KSCSTFE---QWFN--APFATTGEKVELNEEETILII 54
TPLQN L EL +L+ F+L +F K C Q F P T K ++ I
Sbjct: 555 TPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDR----I 610
Query: 55 RRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 114
+L+P++LRRLK +V LP K E II+ +M QK LY ++ L E G
Sbjct: 611 EEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEA---LQQSEESG 667
Query: 115 KTGEGGARALKNTIVQLRKLCNHPFM 140
+ ++++LR+ NHP +
Sbjct: 668 DS--------YGSLMRLRQAANHPLL 685
Score = 40 (19.1 bits), Expect = 7.3e-73, Sum P(3) = 7.3e-73
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 264 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAAR 308
D D P D ++R + G+ + R + +E +L AR
Sbjct: 265 DGDETPSDDSDIEERRAKRGETKNQKECREFFNKAKKEDLLQQAR 309
>DICTYBASE|DDB_G0281441 [details] [associations]
symbol:ercc6 "DNA excision repair protein 6"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006289 "nucleotide-excision repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281441 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000041 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0008094 KO:K10841
RefSeq:XP_640679.1 ProteinModelPortal:Q54TY2 STRING:Q54TY2
EnsemblProtists:DDB0232361 GeneID:8623063 KEGG:ddi:DDB_G0281441
InParanoid:Q54TY2 OMA:NIHKERW ProtClustDB:CLSZ2736745
Uniprot:Q54TY2
Length = 1655
Score = 762 (273.3 bits), Expect = 7.3e-72, Sum P(2) = 7.3e-72
Identities = 183/530 (34%), Positives = 286/530 (53%)
Query: 506 EKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNL 565
EK E++E K+A EE I Y + + L EYQ+ + W+ L+
Sbjct: 759 EKIFEEEEEKEAEEEI----IGDDYEIDENFKIPFDIYKNLFEYQVTCVRWLYELHCQET 814
Query: 566 NGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVA 625
GI+ DEMGLGKTVQ ++ L L ++ GP L++ P + LSNW+ EF KW P V
Sbjct: 815 GGIVGDEMGLGKTVQIVSFLASLHYSRRLGGPALIVAPATLLSNWIKEFHKWWPPFRVGL 874
Query: 626 YKGSPLARRALQGRMKNS-------KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRM 678
+ S G K K ++LLTT++ I ++ +L K W+ +I+DEGH++
Sbjct: 875 FHSSGSGGGGNDGSDKEDIVKKIAEKGHILLTTFDSIRINQEILLKYHWEYVILDEGHKI 934
Query: 679 KNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAP 738
+N ++T + + HRV+L+G+P+QNKL ELW+L +F+ P + F+ F+ P
Sbjct: 935 RNPDAEITLSCKQL-QTPHRVILSGSPIQNKLTELWSLFDFVFPGRLGTLPIFKSQFSLP 993
Query: 739 FATTG--EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
+ G + + L ++ P++LRR+K +V LP K E ++ C ++ Q
Sbjct: 994 ISVGGFANASPIQVQAAYKCAVALRDLISPYMLRRVKSDVLKSLPSKNEQVLMCPLTPFQ 1053
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP-FMFQNIEEKYCQHI 855
+ LY + D ++ +G AL + L+K+CNHP + + ++ H
Sbjct: 1054 EKLY-------LEFLDSNDIKSVLDGRRNALYGIDI-LKKICNHPDILHMDASDEDRPHD 1105
Query: 856 GQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRD--- 912
N I R S K ++++ ILP + + +VL+FCQ Q++ I+E Y RD
Sbjct: 1106 YGN--------IER-SAKLKVVETILPLWFKQGDKVLLFCQTRQMLDIVEQYI--RDSTQ 1154
Query: 913 FSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNP 972
F+YLR+DGTT R L+ +FN S FIFLL+T+ GGLGLNL A+ VI+FD DWNP
Sbjct: 1155 FNYLRMDGTTSIRQRQCLVEQFNIDPS-LFIFLLTTKVGGLGLNLTGANRVILFDPDWNP 1213
Query: 973 HQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQ 1022
D+QA++R +RIGQK V + RLIT+ ++EE+I YK + K+++
Sbjct: 1214 STDMQARERVYRIGQKKAVTIYRLITLGTIEEKIYHRQIYKQFLTNKILK 1263
Score = 471 (170.9 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 115/322 (35%), Positives = 177/322 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRLH 58
+P+QNKL ELW+L +F+ P + F+ F+ P + G + + L
Sbjct: 959 SPIQNKLTELWSLFDFVFPGRLGTLPIFKSQFSLPISVGGFANASPIQVQAAYKCAVALR 1018
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGE 118
++ P++LRR+K +V LP K E ++ C ++ Q+ LY + D ++ +
Sbjct: 1019 DLISPYMLRRVKSDVLKSLPSKNEQVLMCPLTPFQEKLY-------LEFLDSNDIKSVLD 1071
Query: 119 GGARALKNTIVQLRKLCNHP-FMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRI 177
G AL + L+K+CNHP + + ++ H N I R S K ++++ I
Sbjct: 1072 GRRNALYGIDI-LKKICNHPDILHMDASDEDRPHDYGN--------IER-SAKLKVVETI 1121
Query: 178 LPKFKETKHRVLMFCQMTQLMTILEDYFIWRD---FSYLRLDGTTKSEDRGELLRKFNEP 234
LP + + +VL+FCQ Q++ I+E Y RD F+YLR+DGTT R L+ +FN
Sbjct: 1122 LPLWFKQGDKVLLFCQTRQMLDIVEQYI--RDSTQFNYLRMDGTTSIRQRQCLVEQFNID 1179
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
S FIFLL+T+ GGLGLNL A+ VI+FD DWNP D+QA++R +RIGQK V + RLI
Sbjct: 1180 PS-LFIFLLTTKVGGLGLNLTGANRVILFDPDWNPSTDMQARERVYRIGQKKAVTIYRLI 1238
Query: 295 TVNSVEERILAAARYKLNMDEK 316
T+ ++EE+I YK + K
Sbjct: 1239 TLGTIEEKIYHRQIYKQFLTNK 1260
Score = 37 (18.1 bits), Expect = 7.3e-72, Sum P(2) = 7.3e-72
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 504 VGEKKTEDDEYKDAGEEATYYS------IAHTYHEKVTEQASIMVNGKLKEYQIKGLEW 556
V + DDE +D +E Y + + + E+ T+ +G K YQ + LEW
Sbjct: 627 VDDDDDNDDEDEDDEDEKIDYDDRIPKELLNIHKERWTD------DGNEKVYQKRLLEW 679
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 732 (262.7 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
Identities = 181/509 (35%), Positives = 272/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQTI L L ++ + GPYLV P
Sbjct: 614 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 673
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K V
Sbjct: 674 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQI 733
Query: 664 KIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
K ++ + ID+ C + + N+ + +L + KL
Sbjct: 734 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 793
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 794 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 850
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+ + R + G G +L N ++ L
Sbjct: 851 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMMDL 905
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + N + G + ++SGK LL ++L K ++ HRVL+F
Sbjct: 906 KKCCNHPYLFPVAAVE--APVLPNGSY-DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIF 962
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 963 SQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1022
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K+
Sbjct: 1023 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1082
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ KS GS + L IL
Sbjct: 1083 MLTHLVVRPGL-GSKS-GSMTKQELDDIL 1109
Score = 524 (189.5 bits), Expect = 5.7e-48, Sum P(2) = 5.7e-48
Identities = 110/271 (40%), Positives = 166/271 (61%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 823 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 879
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R + G G +L N ++ L+K CNHP++F + + N +
Sbjct: 880 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE--APVLPNGSY-D 931
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K ++ HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 932 GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT 991
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAH
Sbjct: 992 GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1051
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKL 311
RIGQ +V + R +T SVEERI A+ K+
Sbjct: 1052 RIGQNKKVMIYRFVTRASVEERITQVAKRKM 1082
Score = 155 (59.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 793 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 839
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R
Sbjct: 840 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 882
Score = 70 (29.7 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S DQEW
Sbjct: 1218 LGKGKRIRKQVNYNDASQEDQEW 1240
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 732 (262.7 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 181/509 (35%), Positives = 272/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQTI L L ++ + GPYLV P
Sbjct: 630 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 689
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K V
Sbjct: 690 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQI 749
Query: 664 KIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
K ++ + ID+ C + + N+ + +L + KL
Sbjct: 750 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 809
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 810 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 866
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+ + R + G G +L N ++ L
Sbjct: 867 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMMDL 921
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + N + G + ++SGK LL ++L K ++ HRVL+F
Sbjct: 922 KKCCNHPYLFPVAAVE--APVLPNGSY-DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIF 978
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 979 SQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1038
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K+
Sbjct: 1039 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1098
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ KS GS + L IL
Sbjct: 1099 MLTHLVVRPGL-GSKS-GSMTKQELDDIL 1125
Score = 524 (189.5 bits), Expect = 5.8e-47, Sum P(3) = 5.8e-47
Identities = 110/271 (40%), Positives = 166/271 (61%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 839 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 895
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R + G G +L N ++ L+K CNHP++F + + N +
Sbjct: 896 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE--APVLPNGSY-D 947
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K ++ HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 948 GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT 1007
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAH
Sbjct: 1008 GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1067
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKL 311
RIGQ +V + R +T SVEERI A+ K+
Sbjct: 1068 RIGQNKKVMIYRFVTRASVEERITQVAKRKM 1098
Score = 155 (59.6 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 809 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 855
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R
Sbjct: 856 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 898
Score = 70 (29.7 bits), Expect = 2.0e-71, Sum P(2) = 2.0e-71
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S DQEW
Sbjct: 1271 LGKGKRIRKQVNYNDASQEDQEW 1293
Score = 40 (19.1 bits), Expect = 5.8e-47, Sum P(3) = 5.8e-47
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
D+ KL+D+ +D L +EY+S+
Sbjct: 1190 DDAAISKLLDRNQDATDDTELQNMNEYLSS 1219
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 732 (262.7 bits), Expect = 2.5e-71, Sum P(2) = 2.5e-71
Identities = 181/509 (35%), Positives = 272/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQTI L L ++ + GPYLV P
Sbjct: 561 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 620
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K V
Sbjct: 621 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQI 680
Query: 664 KIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
K ++ + ID+ C + + N+ + +L + KL
Sbjct: 681 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 740
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 741 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 797
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+ + R + G G +L N ++ L
Sbjct: 798 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMMDL 852
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + N + G + ++SGK LL ++L K ++ HRVL+F
Sbjct: 853 KKCCNHPYLFPVAAVE--APVLPNGSY-DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIF 909
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 910 SQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 969
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K+
Sbjct: 970 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1029
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ KS GS + L IL
Sbjct: 1030 MLTHLVVRPGL-GSKS-GSMTKQELDDIL 1056
Score = 524 (189.5 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 110/271 (40%), Positives = 166/271 (61%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 770 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 826
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R + G G +L N ++ L+K CNHP++F + + N +
Sbjct: 827 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE--APVLPNGSY-D 878
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K ++ HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 879 GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT 938
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAH
Sbjct: 939 GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 998
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKL 311
RIGQ +V + R +T SVEERI A+ K+
Sbjct: 999 RIGQNKKVMIYRFVTRASVEERITQVAKRKM 1029
Score = 155 (59.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 740 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 786
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R
Sbjct: 787 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 829
Score = 70 (29.7 bits), Expect = 2.5e-71, Sum P(2) = 2.5e-71
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S DQEW
Sbjct: 1202 LGKGKRIRKQVNYNDASQEDQEW 1224
Score = 40 (19.1 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
D+ KL+D+ +D L +EY+S+
Sbjct: 1121 DDAAISKLLDRNQDATDDTELQNMNEYLSS 1150
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 702 (252.2 bits), Expect = 3.2e-71, Sum P(3) = 3.2e-71
Identities = 151/343 (44%), Positives = 211/343 (61%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E E S + G L++YQ++GL WM+SLY N +N
Sbjct: 71 RRTEQEEDEELLSESRKTSNVCIRFE---ESPSYVKGGTLRDYQVRGLNWMISLYENGVN 127
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V
Sbjct: 128 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCL 187
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 188 IGDKDARAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKL 247
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F +++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 248 SEIVREF-KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 299
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K EVE LP K E I +S +Q+ Y
Sbjct: 300 NCLGDQK---LVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTR--- 353
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 354 --ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 394
Score = 649 (233.5 bits), Expect = 1.9e-60, Sum P(2) = 1.9e-60
Identities = 143/290 (49%), Positives = 179/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VL+PFLLRR+K EVE LP K E I +S +Q+ Y IL+ D
Sbjct: 307 LVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTR-----ILMKDIDI 361
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 362 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDTHLITNSGKML 413
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++L K +E RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E + FN
Sbjct: 414 VLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN 473
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
P S FIF+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQK VRV R
Sbjct: 474 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 533
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
LIT N+VEERI+ A KL +D VIQ G + DQ+S + E LQ I H
Sbjct: 534 LITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKDEMLQMIRH 583
Score = 606 (218.4 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 131/262 (50%), Positives = 164/262 (62%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VL+PFLLRR+K EVE LP K E I +S +Q+ Y IL+ D
Sbjct: 307 LVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTR-----ILMKDIDI 361
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 362 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDTHLITNSGKML 413
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++L K +E RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E + FN
Sbjct: 414 VLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN 473
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
P S FIF+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQK VRV R
Sbjct: 474 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 533
Query: 293 LITVNSVEERILAAARYKLNMD 314
LIT N+VEERI+ A KL +D
Sbjct: 534 LITDNTVEERIVERAEIKLRLD 555
Score = 271 (100.5 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 63/145 (43%), Positives = 82/145 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 265 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 314
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K EVE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 315 LKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTR-----ILMKDIDILNSAGKMD 369
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 370 KMRLLNILMQLRKCCNHPYLFDGAE 394
Score = 67 (28.6 bits), Expect = 3.2e-71, Sum P(3) = 3.2e-71
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ +R ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 815 WERCNELQDIERIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTNKG 871
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 872 KNYTEEEDRFLICMLHK 888
Score = 42 (19.8 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 267 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYK 310
W +LQ +R ++ E R+ R I++ +++ +I ARYK
Sbjct: 815 WERCNELQDIERIMAQIERGEARIQRRISIKKALDAKI---ARYK 856
Score = 40 (19.1 bits), Expect = 3.2e-71, Sum P(3) = 3.2e-71
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 4 DPE-YEEKMKADRAKRFEFLLKQTE 27
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 729 (261.7 bits), Expect = 7.8e-71, Sum P(2) = 7.8e-71
Identities = 181/509 (35%), Positives = 270/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQTI L L ++ + GPYLV P
Sbjct: 696 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 755
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
LST+ NW EFE WAP VV Y G +R ++ + + N + + K V
Sbjct: 756 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQI 815
Query: 664 KIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
K ++ + ID+ C + + N+ + +L + KL
Sbjct: 816 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 875
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 876 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 932
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+ + R + G G +L N ++ L
Sbjct: 933 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMMDL 987
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + N G + ++SGK LL ++L K ++ HRVL+F
Sbjct: 988 KKCCNHPYLFP-VAAVEAPMLP--NGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIF 1044
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1045 SQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1104
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K+
Sbjct: 1105 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1164
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ KS GS + L IL
Sbjct: 1165 MLTHLVVRPGL-GSKS-GSMTKQELDDIL 1191
Score = 524 (189.5 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 110/271 (40%), Positives = 165/271 (60%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 905 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 961
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R + G G +L N ++ L+K CNHP++F + + N
Sbjct: 962 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFP-VAAVEAPMLP--NGSYD 1013
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K ++ HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1014 GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT 1073
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAH
Sbjct: 1074 GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1133
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKL 311
RIGQ +V + R +T SVEERI A+ K+
Sbjct: 1134 RIGQNKKVMIYRFVTRASVEERITQVAKRKM 1164
Score = 155 (59.6 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 875 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 921
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R
Sbjct: 922 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 964
Score = 70 (29.7 bits), Expect = 7.8e-71, Sum P(2) = 7.8e-71
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S DQEW
Sbjct: 1337 LGKGKRIRKQVNYNDASQEDQEW 1359
Score = 40 (19.1 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
D+ KL+D+ +D L +EY+S+
Sbjct: 1256 DDAAISKLLDRNQDATDDTELQNMNEYLSS 1285
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 705 (253.2 bits), Expect = 8.9e-71, Sum P(2) = 8.9e-71
Identities = 150/343 (43%), Positives = 212/343 (61%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 150 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 206
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 266
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 267 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 326
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 327 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 378
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 379 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK--- 432
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 433 --ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 473
Score = 656 (236.0 bits), Expect = 3.2e-65, Sum P(2) = 3.2e-65
Identities = 155/342 (45%), Positives = 198/342 (57%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 386 LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDV 440
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + I SGK
Sbjct: 441 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMV 492
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E + FN
Sbjct: 493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN 552
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV R
Sbjct: 553 VPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 612
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILHQXXXXXXXXX 1054
LIT N+VEERI+ A KL +D VIQ G + DQ+S + E LQ I H
Sbjct: 613 LITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKE 672
Query: 1055 XXXXXTVNQLIARTEDELTLFQKMDAERRKGETKPRLVEIKE 1096
++L ED TL ++ ER+ E RL ++ E
Sbjct: 673 -------SELT--DEDITTLLER--GERKTAEMNERLQKMGE 703
Score = 610 (219.8 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 132/262 (50%), Positives = 165/262 (62%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 386 LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDV 440
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + I SGK
Sbjct: 441 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMV 492
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E + FN
Sbjct: 493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN 552
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV R
Sbjct: 553 VPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 612
Query: 293 LITVNSVEERILAAARYKLNMD 314
LIT N+VEERI+ A KL +D
Sbjct: 613 LITDNTVEERIVERAEIKLRLD 634
Score = 268 (99.4 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 62/145 (42%), Positives = 82/145 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 344 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 393
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 394 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSAGKMD 448
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 449 KMRLLNILMQLRKCCNHPYLFDGAE 473
Score = 40 (19.1 bits), Expect = 8.9e-71, Sum P(2) = 8.9e-71
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 464 (168.4 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 118/318 (37%), Positives = 178/318 (55%)
Query: 537 QASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNL 595
Q IM K+K YQI G+ W+ L+ N L+ ILAD+MGLGKT Q IA L +L EK
Sbjct: 554 QPGIMAEDLKMKNYQIVGINWLSLLFENELSCILADDMGLGKTCQVIAFLAHLYEKGIK- 612
Query: 596 GPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSK--FNVLLTTYE 653
GP+LV+VP ST+ NW+ EF+K+ P+ +V+ Y R ++ +++ ++ NV++TTY
Sbjct: 613 GPHLVVVPSSTIENWLREFQKFCPTLSVMPYYADQNVRAQIREQIEGNRDDINVVITTYT 672
Query: 654 FIIK---DKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
I K D L + + + DEGH +K+ L + L + R+LLTGTPLQN L
Sbjct: 673 -IAKGKVDAHFLRNMDFCACVYDEGHMLKSSTSVLYEKLIRI-RARFRLLLTGTPLQNNL 730
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILI----IRRLHKVLRP 766
EL +LL F+LP +F+ Q+ F+ + V+ E + L+ I R +L+P
Sbjct: 731 QELASLLGFILPKVFQERKDDLQYI---FSNKAKTVD--ESHSALLSAQRIERAKSMLKP 785
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR-GILLTDGSEKGKTGEGGAR 825
F+LRR K +V LP K+ + C+M+ Q+ +Y+H N LL D + KTG A
Sbjct: 786 FVLRRKKHQV-IDLPAKISRVEYCEMNAAQREIYEHEKNEVKKLLEDRAAGKKTGNKSA- 843
Query: 826 ALKNTIVQLRKLCNHPFM 843
N +++LR+ HP +
Sbjct: 844 ---NILMKLRQAAIHPLL 858
Score = 341 (125.1 bits), Expect = 1.3e-70, Sum P(2) = 1.3e-70
Identities = 74/161 (45%), Positives = 106/161 (65%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK + L +L +FKE RVL+F Q M ILE + ++RLDGTT EDR +
Sbjct: 925 SGKVDKLCELLRRFKENGDRVLVFSQFRLAMDILEVVLENQHLKFVRLDGTTSVEDRQSI 984
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F+E + +FLLST+AGG G+NL A+ VIIFDS +NP +D+QA++RAHR+GQ E
Sbjct: 985 MDTFHE-NTDIPVFLLSTKAGGAGINLACANKVIIFDSSFNPQEDVQAENRAHRVGQTRE 1043
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVI-QAGMFDQKS 1030
V V+RL+T +++EE+I A + KL +D+ V + G +KS
Sbjct: 1044 VEVIRLVTKDTIEEQIYALGQTKLALDQAVAGEDGADSKKS 1084
Score = 336 (123.3 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 70/148 (47%), Positives = 100/148 (67%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK + L +L +FKE RVL+F Q M ILE + ++RLDGTT EDR +
Sbjct: 925 SGKVDKLCELLRRFKENGDRVLVFSQFRLAMDILEVVLENQHLKFVRLDGTTSVEDRQSI 984
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F+E + +FLLST+AGG G+NL A+ VIIFDS +NP +D+QA++RAHR+GQ E
Sbjct: 985 MDTFHE-NTDIPVFLLSTKAGGAGINLACANKVIIFDSSFNPQEDVQAENRAHRVGQTRE 1043
Query: 288 VRVLRLITVNSVEERILAAARYKLNMDE 315
V V+RL+T +++EE+I A + KL +D+
Sbjct: 1044 VEVIRLVTKDTIEEQIYALGQTKLALDQ 1071
Score = 177 (67.4 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 50/145 (34%), Positives = 77/145 (53%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILI----IRR 56
TPLQN L EL +LL F+LP +F+ Q+ F+ + V+ E + L+ I R
Sbjct: 724 TPLQNNLQELASLLGFILPKVFQERKDDLQYI---FSNKAKTVD--ESHSALLSAQRIER 778
Query: 57 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR-GILLTDGSEKGK 115
+L+PF+LRR K +V LP K+ + C+M+ Q+ +Y+H N LL D + K
Sbjct: 779 AKSMLKPFVLRRKKHQV-IDLPAKISRVEYCEMNAAQREIYEHEKNEVKKLLEDRAAGKK 837
Query: 116 TGEGGARALKNTIVQLRKLCNHPFM 140
TG A N +++LR+ HP +
Sbjct: 838 TGNKSA----NILMKLRQAAIHPLL 858
Score = 39 (18.8 bits), Expect = 7.5e-39, Sum P(3) = 7.5e-39
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 604 LSTLSNWVLEFEKWAPSANVVAYK 627
L+ +S L+ EKWA S + Y+
Sbjct: 868 LTKMSKACLQEEKWAESDPKLIYE 891
Score = 37 (18.1 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 510 EDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVS 559
+++++ ++ + Y + Y++ Q + L ++ +K EWM S
Sbjct: 877 QEEKWAESDPKLIYEDL-QPYNDFECHQLCVENPKSLGKFALKNNEWMDS 925
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 735 (263.8 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 717 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 776
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 777 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 836
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 896
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 897 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 952
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 953 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1007
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1008 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1064
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1184
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1185 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1212
Score = 535 (193.4 bits), Expect = 3.0e-48, Sum P(2) = 3.0e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 936 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 993
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 994 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1047
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1048 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1107
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1108 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1167
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1168 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1227
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1228 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1272
Score = 155 (59.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 942
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 943 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 985
Score = 63 (27.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1326 LGKGKRIRKQVNYNDGSQEDRDW 1348
Score = 40 (19.1 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 666 NHRELMRGEEGRPGKKLKK 684
Score = 38 (18.4 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 505 GEKKTEDDEYKDAGEEATYYSIAHTYH-EKVTEQASI 540
GE+K E E K+ EE EKV E+++I
Sbjct: 1607 GEEKVEKAEVKERTEEPMETEPKGAADVEKVEEKSAI 1643
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 735 (263.8 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 903
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 904 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 959
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 960 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1014
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1015 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1071
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1191
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1192 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1219
Score = 535 (193.4 bits), Expect = 3.0e-48, Sum P(2) = 3.0e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 943 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 1000
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 1001 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1054
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1055 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1114
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1115 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1174
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1175 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1234
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1235 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1279
Score = 155 (59.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 949
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 950 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 992
Score = 63 (27.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1333 LGKGKRIRKQVNYNDGSQEDRDW 1355
Score = 40 (19.1 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 673 NHRELMRGEEGRPGKKLKK 691
Score = 37 (18.1 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 807 GILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 841
GI + + S K + G + +K+T + C P
Sbjct: 1563 GIKIEENSLKEEESVEGEKEVKSTAPEATVECTQP 1597
Score = 37 (18.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 104 GILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 138
GI + + S K + G + +K+T + C P
Sbjct: 1563 GIKIEENSLKEEESVEGEKEVKSTAPEATVECTQP 1597
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 735 (263.8 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 903
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 904 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 959
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 960 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1014
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1015 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1071
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1191
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1192 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1219
Score = 535 (193.4 bits), Expect = 3.0e-48, Sum P(2) = 3.0e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 943 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 1000
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 1001 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1054
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1055 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1114
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1115 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1174
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1175 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1234
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1235 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1279
Score = 155 (59.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 949
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 950 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 992
Score = 63 (27.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1333 LGKGKRIRKQVNYNDGSQEDRDW 1355
Score = 40 (19.1 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 673 NHRELMRGEEGRPGKKLKK 691
Score = 38 (18.4 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 505 GEKKTEDDEYKDAGEEATYYSIAHTYH-EKVTEQASI 540
GE+K E E K+ EE EKV E+++I
Sbjct: 1614 GEEKVEKAEVKERTEEPMETEPKGAADVEKVEEKSAI 1650
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 735 (263.8 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 724 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 783
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 784 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 843
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 844 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 903
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 904 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 959
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 960 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1014
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1015 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1071
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1072 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1131
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1132 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1191
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1192 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1219
Score = 535 (193.4 bits), Expect = 3.0e-48, Sum P(2) = 3.0e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 943 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 1000
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 1001 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1054
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1055 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1114
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1115 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1174
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1175 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1234
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1235 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1279
Score = 155 (59.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 949
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 950 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 992
Score = 63 (27.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1333 LGKGKRIRKQVNYNDGSQEDRDW 1355
Score = 40 (19.1 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 673 NHRELMRGEEGRPGKKLKK 691
Score = 37 (18.1 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 505 GEKKTEDDEYKDAGEE 520
GE+K E E K+ EE
Sbjct: 1614 GEEKVEKAEVKERTEE 1629
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 735 (263.8 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 717 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 776
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 777 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 836
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 896
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 897 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 952
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 953 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1007
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1008 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1064
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1184
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1185 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1212
Score = 535 (193.4 bits), Expect = 3.1e-48, Sum P(2) = 3.1e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 936 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 993
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 994 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1047
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1048 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1107
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1108 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1167
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1168 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1227
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1228 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1272
Score = 155 (59.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 942
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 943 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 985
Score = 63 (27.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1326 LGKGKRIRKQVNYNDGSQEDRDW 1348
Score = 45 (20.9 bits), Expect = 2.4e-46, Sum P(2) = 2.4e-46
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 505 GEKKTEDDEYKDAGEEATYYSIAHTYH-EKVTEQASI 540
GE+K E E K+ EE T EKV E++++
Sbjct: 1617 GEEKVEKAEVKERTEEPMETEAKGTTEVEKVEEKSAV 1653
Score = 40 (19.1 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 666 NHRELMRGEEGRPGKKLKK 684
Score = 38 (18.4 bits), Expect = 7.7e-68, Sum P(3) = 7.7e-68
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1077 KMDAERRKGETKPRLVEIKE 1096
K AE +GE K E+KE
Sbjct: 1609 KAPAEPPEGEEKVEKAEVKE 1628
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 735 (263.8 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 717 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 776
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 777 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 836
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 837 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 896
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 897 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 952
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 953 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1007
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1008 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1064
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1065 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1124
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1125 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1184
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1185 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1212
Score = 535 (193.4 bits), Expect = 3.1e-48, Sum P(2) = 3.1e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 936 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 993
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 994 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1047
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1048 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1107
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1108 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1167
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1168 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1227
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1228 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1272
Score = 155 (59.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 942
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 943 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 985
Score = 63 (27.2 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1326 LGKGKRIRKQVNYNDGSQEDRDW 1348
Score = 43 (20.2 bits), Expect = 3.9e-46, Sum P(2) = 3.9e-46
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 505 GEKKTEDDEYKDAGEEATYY-SIAHTYHEKVTEQASI 540
GE+K E E K+ EE S T EK E++++
Sbjct: 1617 GEEKVEKAEVKERAEEPMETESKGTTEVEKAEEKSAV 1653
Score = 40 (19.1 bits), Expect = 1.8e-70, Sum P(3) = 1.8e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 666 NHRELMRGEEGRPGKKLKK 684
Score = 38 (18.4 bits), Expect = 7.7e-68, Sum P(3) = 7.7e-68
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1077 KMDAERRKGETKPRLVEIKE 1096
K AE +GE K E+KE
Sbjct: 1609 KAPAEPPEGEEKVEKAEVKE 1628
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 732 (262.7 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 181/509 (35%), Positives = 272/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQTI L L ++ + GPYLV P
Sbjct: 698 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 757
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K V
Sbjct: 758 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQI 817
Query: 664 KIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
K ++ + ID+ C + + N+ + +L + KL
Sbjct: 818 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 877
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 878 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 934
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+ + R + G G +L N ++ L
Sbjct: 935 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMMDL 989
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + N + G + ++SGK LL ++L K ++ HRVL+F
Sbjct: 990 KKCCNHPYLFPVAAVE--APVLPNGSY-DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIF 1046
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1047 SQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1106
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K+
Sbjct: 1107 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1166
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ KS GS + L IL
Sbjct: 1167 MLTHLVVRPGL-GSKS-GSMTKQELDDIL 1193
Score = 524 (189.5 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 110/271 (40%), Positives = 166/271 (61%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 907 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 963
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R + G G +L N ++ L+K CNHP++F + + N +
Sbjct: 964 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE--APVLPNGSY-D 1015
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K ++ HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1016 GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT 1075
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAH
Sbjct: 1076 GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1135
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKL 311
RIGQ +V + R +T SVEERI A+ K+
Sbjct: 1136 RIGQNKKVMIYRFVTRASVEERITQVAKRKM 1166
Score = 155 (59.6 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 923
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R
Sbjct: 924 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 966
Score = 70 (29.7 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S DQEW
Sbjct: 1339 LGKGKRIRKQVNYNDASQEDQEW 1361
Score = 40 (19.1 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
D+ KL+D+ +D L +EY+S+
Sbjct: 1258 DDAAISKLLDRNQDATDDTELQNMNEYLSS 1287
Score = 37 (18.1 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 502 KAVGEKKTEDDEYKDAG 518
KA +KK ED++ D G
Sbjct: 110 KAKRKKKDEDEDDNDDG 126
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 735 (263.8 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 744 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 803
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 804 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 863
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 864 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 923
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 924 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 979
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 980 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1034
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1035 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1091
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1092 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1151
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1152 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1211
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1212 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1239
Score = 535 (193.4 bits), Expect = 3.1e-48, Sum P(2) = 3.1e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 963 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 1020
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 1021 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1074
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1075 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1134
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1135 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1194
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1195 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1254
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1255 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1299
Score = 155 (59.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 923 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 969
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 970 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 1012
Score = 63 (27.2 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1353 LGKGKRIRKQVNYNDGSQEDRDW 1375
Score = 40 (19.1 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 693 NHRELMRGEEGRPGKKLKK 711
Score = 37 (18.1 bits), Expect = 1.7e-45, Sum P(2) = 1.7e-45
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 807 GILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 841
GI + + S K + G + +K+T + C P
Sbjct: 1583 GIKIEENSLKEEESVEGEKEVKSTAPEATVECTQP 1617
Score = 37 (18.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 104 GILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 138
GI + + S K + G + +K+T + C P
Sbjct: 1583 GIKIEENSLKEEESVEGEKEVKSTAPEATVECTQP 1617
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 735 (263.8 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 746 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 805
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 806 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 865
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 866 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 925
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 926 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 981
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 982 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1036
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1037 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1093
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1094 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1153
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1154 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1213
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1214 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1241
Score = 535 (193.4 bits), Expect = 3.1e-48, Sum P(2) = 3.1e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 965 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 1022
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 1023 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1076
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1077 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1136
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1137 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1196
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1197 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1256
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1257 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1301
Score = 155 (59.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 925 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 971
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 972 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 1014
Score = 63 (27.2 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1355 LGKGKRIRKQVNYNDGSQEDRDW 1377
Score = 46 (21.3 bits), Expect = 1.9e-46, Sum P(2) = 1.9e-46
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 505 GEKKTEDDEYKDAGEEATYYSI-AHTYHEKVTEQASI 540
GE+K E E K+ EEA + EKV E+A++
Sbjct: 1636 GEEKVEKAEVKERTEEAMETDPKGNADVEKVEEKAAV 1672
Score = 40 (19.1 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 695 NHRELMRGEEGRPGKKLKK 713
Score = 40 (19.1 bits), Expect = 5.0e-68, Sum P(3) = 5.0e-68
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 1076 QKMDAERRKGETKPRLVEIKELPDWMVKDD 1105
+K+ E +GE K E+KE + ++ D
Sbjct: 1627 EKVPVEPPEGEEKVEKAEVKERTEEAMETD 1656
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 735 (263.8 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 184/510 (36%), Positives = 275/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 745 GTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 804
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEF--IIKDKSV 661
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K+ SV
Sbjct: 805 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASV 864
Query: 662 LSKI---QWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
+ ++ + ID + C + + N+ + +L G LQ+KL
Sbjct: 865 KFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGT 924
Query: 716 LLNFLLPSIFKSCS--TFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + T E++ N E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 925 PLQNNLEELFHLLNFLTPERFHNLE-GFLEEFADIAKEDQI---KKLHDMLGPHMLRRLK 980
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ R + G G +L N ++
Sbjct: 981 ADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-----GGGNQVSLLNVVMD 1035
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + R SGK LL ++L KE HRVL+
Sbjct: 1036 LKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLI 1092
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 1093 FSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGL 1152
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1153 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKK 1212
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + TGS + L IL
Sbjct: 1213 MMLTHLVVRPGLGSK--TGSMSKQELDDIL 1240
Score = 535 (193.4 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 121/345 (35%), Positives = 187/345 (54%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEK 113
I++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++ R +
Sbjct: 964 IKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR-- 1021
Query: 114 GKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFEL 173
G G +L N ++ L+K CNHP++F + + N + G + R SGK L
Sbjct: 1022 ---GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPK---MPNGMYDGSALIRASGKLLL 1075
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
L ++L KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN
Sbjct: 1076 LQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNA 1135
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R
Sbjct: 1136 PGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRF 1195
Query: 294 ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXX 349
+T SVEERI A+ K+ + ++T ++K I+ +
Sbjct: 1196 VTRASVEERITQVAKKKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEELFKDEATDG 1255
Query: 350 XXXXXXX--XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D++ +L+D+ +D+ L +EY+S+
Sbjct: 1256 GGDNKEGEDSSVIHYDDKAIERLLDRNQDETEDTELQGMNEYLSS 1300
Score = 155 (59.6 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 924 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 970
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 971 LGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTR 1013
Score = 63 (27.2 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S D++W
Sbjct: 1354 LGKGKRIRKQVNYNDGSQEDRDW 1376
Score = 43 (20.2 bits), Expect = 4.1e-46, Sum P(2) = 4.1e-46
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 505 GEKKTEDDEYKDAGEEATYY-SIAHTYHEKVTEQASI 540
GE+K E E K+ EE S T EK E++++
Sbjct: 1651 GEEKVEKAEVKERAEEPMETESKGTTEVEKAEEKSAV 1687
Score = 40 (19.1 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 450 NSDNKLRGEDAPPAKQIKE 468
N +RGE+ P K++K+
Sbjct: 694 NHRELMRGEEGRPGKKLKK 712
Score = 38 (18.4 bits), Expect = 8.5e-68, Sum P(3) = 8.5e-68
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1077 KMDAERRKGETKPRLVEIKE 1096
K AE +GE K E+KE
Sbjct: 1643 KAPAEPPEGEEKVEKAEVKE 1662
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 460 (167.0 bits), Expect = 2.1e-70, Sum P(2) = 2.1e-70
Identities = 121/324 (37%), Positives = 171/324 (52%)
Query: 546 LKEYQIKGLEWMVSLYNNNLNG-ILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPL 604
LK YQ+ G+ +++ LY + G ILADEMGLGKT+Q I LT L + GP+LV+ P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 605 STLSNWVLEFEKWAPSANVVAYKGSPLAR--RALQGRMKNSK---FNVLLTTYEFIIK-- 657
S L NW E KW PS V+ Y G+ A R L K K FNVLL Y +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 658 -----DKSVLSKIQWKCMIIDEGHRMKNHHC-KLTQTLNTFYNSSHRVLLTGTPLQNKLP 711
D+ VL + +W C+++DE H +K+ + + ++ N++ R++LTGTPLQN L
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 392
Query: 712 ELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRR 771
ELW+LL F+LP IF T E N K LN E+T LI R + +L PF+LRR
Sbjct: 393 ELWSLLEFMLPDIF----TTE---NVDL-----KKLLNAEDTELITR-MKSILGPFILRR 439
Query: 772 LKKEVESQL-P--EKVEYII--KCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA-- 824
LK +V QL P ++VEY++ + ++ + ++ L S K A
Sbjct: 440 LKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALP 499
Query: 825 -RALKNTIVQLRKLCNHPFMFQNI 847
R + N Q RK+ NHP + + I
Sbjct: 500 KRQISNYFTQFRKIANHPLLIRRI 523
Score = 333 (122.3 bits), Expect = 2.1e-70, Sum P(2) = 2.1e-70
Identities = 82/192 (42%), Positives = 113/192 (58%)
Query: 856 GQNNTVVSGPDIY-RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFS 914
G N+T + D + S K L +LP K++ HRVL+F Q T ++ ILE +
Sbjct: 571 GVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVT 630
Query: 915 YLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ 974
Y RLDG+T+ DR ++ FN +S F LLSTRAGG GLNL ADTVII D D+NP
Sbjct: 631 YRRLDGSTQVTDRQTIVDTFNNDKS-IFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQI 689
Query: 975 DLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMF-DQKSTGS 1033
D QA+DR HRIGQ V + RL+T ++V+E I A+ KL +D V+++G+ D
Sbjct: 690 DRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLESGVHVDDNGDTP 749
Query: 1034 ERH--EFLQTIL 1043
E+ E L ++L
Sbjct: 750 EKTMGEILASLL 761
Score = 318 (117.0 bits), Expect = 3.7e-37, Sum P(2) = 3.7e-37
Identities = 75/163 (46%), Positives = 99/163 (60%)
Query: 153 GQNNTVVSGPDIY-RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFS 211
G N+T + D + S K L +LP K++ HRVL+F Q T ++ ILE +
Sbjct: 571 GVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVT 630
Query: 212 YLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ 271
Y RLDG+T+ DR ++ FN +S F LLSTRAGG GLNL ADTVII D D+NP
Sbjct: 631 YRRLDGSTQVTDRQTIVDTFNNDKS-IFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQI 689
Query: 272 DLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
D QA+DR HRIGQ V + RL+T ++V+E I A+ KL +D
Sbjct: 690 DRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLD 732
Score = 169 (64.5 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 55/152 (36%), Positives = 76/152 (50%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LL F+LP IF T E N K LN E+T LI R + +
Sbjct: 385 TPLQNDLHELWSLLEFMLPDIF----TTE---NVDL-----KKLLNAEDTELITR-MKSI 431
Query: 61 LRPFLLRRLKKEVESQL-P--EKVEYII--KCDMSGLQKLLYQHLHNRGILLTDGSEKGK 115
L PF+LRRLK +V QL P ++VEY++ + ++ + ++ L S K
Sbjct: 432 LGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSL 491
Query: 116 TGEGGA---RALKNTIVQLRKLCNHPFMFQNI 144
A R + N Q RK+ NHP + + I
Sbjct: 492 NSLAKALPKRQISNYFTQFRKIANHPLLIRRI 523
Score = 40 (19.1 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 277 DRAHRIGQKNEVRVLRLITV-NSVEERIL 304
D AH + KN R L++V + +R++
Sbjct: 353 DEAHALKDKNSYRWKNLMSVARNANQRLM 381
Score = 37 (18.1 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1020 VIQAGMFDQKSTGSERHEFL 1039
+ Q G+ D K T S++H L
Sbjct: 567 LFQYGVNDTKGTLSDKHVML 586
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 730 (262.0 bits), Expect = 4.1e-70, Sum P(3) = 4.1e-70
Identities = 179/509 (35%), Positives = 272/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKT+QTI L L ++ GP+LV P
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYE-FIIKDKSVL 662
LST+ NW EF+ WAP VV Y G +R ++ + + N + + F +K ++ +
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 663 S----KIQWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
++ + ID+ C + + N+ + +L G + +KL
Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 913
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 914 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 970
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+++ R G G +L N ++ L
Sbjct: 971 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMDL 1025
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + G + + SGK LL ++L K KE HRVL+F
Sbjct: 1026 KKCCNHPYLFP-VAAMESPKLPSG--AYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIF 1082
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1083 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1142
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1143 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1202
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ + GS + L IL
Sbjct: 1203 MLTHLVVRPGLGSK--AGSMSKQELDDIL 1229
Score = 538 (194.4 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 122/354 (34%), Positives = 190/354 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++
Sbjct: 943 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI 999
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R G G +L N ++ L+K CNHP++F + +
Sbjct: 1000 LTRNF-----EALNSRGGGNQVSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSG--AYE 1051
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + + SGK LL ++L K KE HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1052 GGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT 1111
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVIIFDSDWNPH D+QA RAH
Sbjct: 1112 GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH 1171
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN--YHI 338
RIGQ N+V + R +T SVEERI A+ K+ + ++ ++K ++
Sbjct: 1172 RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF 1231
Query: 339 NAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D E +L+D+ +D + +EY+S+
Sbjct: 1232 GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSS 1285
Score = 158 (60.7 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 959
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 960 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR 1002
Score = 55 (24.4 bits), Expect = 4.1e-70, Sum P(3) = 4.1e-70
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQE 1146
+G+G R RKQV+Y D+ + +
Sbjct: 1337 LGKGKRVRKQVNYNDAAQEDQ 1357
Score = 52 (23.4 bits), Expect = 4.1e-70, Sum P(3) = 4.1e-70
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 506 EKKTEDDEYKDAGEE 520
E K EDD+Y++ GEE
Sbjct: 431 EAKEEDDDYEEEGEE 445
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 698 (250.8 bits), Expect = 5.7e-70, Sum P(2) = 5.7e-70
Identities = 144/348 (41%), Positives = 222/348 (63%)
Query: 500 PSKAVGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWM 557
P+ +G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+
Sbjct: 564 PTTTLGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWL 619
Query: 558 VSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKW 617
V++Y LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W
Sbjct: 620 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 679
Query: 618 APSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGH 676
PS ++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE
Sbjct: 680 CPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ 739
Query: 677 RMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
+KN + Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+
Sbjct: 740 NIKNFKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFS 798
Query: 737 APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
P TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q
Sbjct: 799 NPL--TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQ 855
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ LY + + K G ++ N ++QLRK+CNHP +F
Sbjct: 856 RCLYDDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 897
Score = 301 (111.0 bits), Expect = 9.8e-23, P = 9.8e-23
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 766 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 822
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 823 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 876
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 877 FMSVINILMQLRKVCNHPNLF 897
Score = 40 (19.1 bits), Expect = 5.7e-70, Sum P(2) = 5.7e-70
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 212 DLHLDFIVGQTEKYSDLLSQ 231
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 698 (250.8 bits), Expect = 5.7e-70, Sum P(2) = 5.7e-70
Identities = 144/348 (41%), Positives = 222/348 (63%)
Query: 500 PSKAVGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWM 557
P+ +G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+
Sbjct: 566 PTTTLGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWL 621
Query: 558 VSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKW 617
V++Y LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W
Sbjct: 622 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 681
Query: 618 APSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGH 676
PS ++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE
Sbjct: 682 CPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ 741
Query: 677 RMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
+KN + Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+
Sbjct: 742 NIKNFKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFS 800
Query: 737 APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
P TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q
Sbjct: 801 NPL--TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQ 857
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ LY + + K G ++ N ++QLRK+CNHP +F
Sbjct: 858 RCLYDDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 899
Score = 301 (111.0 bits), Expect = 9.8e-23, P = 9.8e-23
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 768 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 824
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 825 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 878
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 879 FMSVINILMQLRKVCNHPNLF 899
Score = 40 (19.1 bits), Expect = 5.7e-70, Sum P(2) = 5.7e-70
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 211 DLHLDFIVGQTEKYSDLLSQ 230
>ASPGD|ASPL0000018137 [details] [associations]
symbol:AN4187 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:BN001302
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 EMBL:AACD01000068 OrthoDB:EOG44XNQZ
RefSeq:XP_661791.1 ProteinModelPortal:Q5B5J3 STRING:Q5B5J3
EnsemblFungi:CADANIAT00004481 GeneID:2873610 KEGG:ani:AN4187.2
Uniprot:Q5B5J3
Length = 1904
Score = 492 (178.3 bits), Expect = 5.7e-70, Sum P(2) = 5.7e-70
Identities = 118/337 (35%), Positives = 182/337 (54%)
Query: 533 KVTE-QASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALL------ 585
KV E + + + +L+ YQ +G+ W+ L NL+GIL D+MGLGKT+QTI ++
Sbjct: 1304 KVEEFKLPVAIKAELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHM 1363
Query: 586 -------TYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQG 638
T E +K P L+I P S +W E +++AP N VAY G P R LQG
Sbjct: 1364 RAEDFAKTQRPESRKV--PSLIICPPSLSGHWQQEVKQYAPFLNCVAYVGPPAERSKLQG 1421
Query: 639 RMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHR 698
+ ++ ++++T+Y+ D VL I W ++DEGH +KN K+T + NS+HR
Sbjct: 1422 SLADA--DIVVTSYDICRNDNDVLRPISWNYCVLDEGHLIKNPKAKVTMAVKRI-NSNHR 1478
Query: 699 VLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEET-ILII 757
++L+GTP+QN + ELW+L +FL+P + F F P AT+ E+E L I
Sbjct: 1479 LILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIATSRFSKSSKEQEAGALAI 1538
Query: 758 RRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 817
LHK + PFLLRRLK+EV + LP K+ CD S LQK L++ + + G
Sbjct: 1539 EALHKQVLPFLLRRLKEEVLNDLPPKIIQNYYCDPSELQKKLFEDFTKKEQKALQ-EKMG 1597
Query: 818 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQH 854
+ + + + +R+LCN P + ++E + Q+
Sbjct: 1598 SSEKADKEHIFQALQYMRRLCNSPALV--VKEGHKQY 1632
Score = 314 (115.6 bits), Expect = 5.7e-70, Sum P(2) = 5.7e-70
Identities = 62/136 (45%), Positives = 90/136 (66%)
Query: 889 HRVLMFCQMTQLMTILEDYFIWR---DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
HR L+FCQM +++ I++ + + +LRLDG ++ R +++ +FN S Y + L
Sbjct: 1686 HRALVFCQMKEMLDIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNSDPS-YDVLL 1744
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L+T GGLGLNL ADTVI + DWNP +D+QA DRAHRIGQK V V RLIT ++EE+
Sbjct: 1745 LTTSVGGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEK 1804
Query: 1006 ILAAARYKLNMDEKVI 1021
IL R+K+++ V+
Sbjct: 1805 ILNLQRFKIDVASTVV 1820
Score = 312 (114.9 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 62/140 (44%), Positives = 91/140 (65%)
Query: 186 HRVLMFCQMTQLMTILEDYFIWR---DFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 242
HR L+FCQM +++ I++ + + +LRLDG ++ R +++ +FN S Y + L
Sbjct: 1686 HRALVFCQMKEMLDIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNSDPS-YDVLL 1744
Query: 243 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 302
L+T GGLGLNL ADTVI + DWNP +D+QA DRAHRIGQK V V RLIT ++EE+
Sbjct: 1745 LTTSVGGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEK 1804
Query: 303 ILAAARYKLNMDEKEYHRNN 322
IL R+K+++ ++ N
Sbjct: 1805 ILNLQRFKIDVASTVVNQQN 1824
Score = 211 (79.3 bits), Expect = 7.6e-40, Sum P(2) = 7.6e-40
Identities = 65/220 (29%), Positives = 103/220 (46%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEET-ILIIRRLHK 59
TP+QN + ELW+L +FL+P + F F P AT+ E+E L I LHK
Sbjct: 1484 TPIQNNVLELWSLFDFLMPGFLGTEKVFLDRFAKPIATSRFSKSSKEQEAGALAIEALHK 1543
Query: 60 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEG 119
+ PFLLRRLK+EV + LP K+ CD S LQK L++ + + G + +
Sbjct: 1544 QVLPFLLRRLKEEVLNDLPPKIIQNYYCDPSELQKKLFEDFTKKEQKALQ-EKMGSSEKA 1602
Query: 120 GARALKNTIVQLRKLCNHPFMF------------QNIEEK--YCQHIGQNNTVVSGPDIY 165
+ + +R+LCN P + Q ++EK Y + + + + D+
Sbjct: 1603 DKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQQYLQEKKSYLRDVSHAPKLSALKDLL 1662
Query: 166 RTSG-KFELLDRILPKFKE--TKHRVLMFCQMTQLMTILE 202
G E + L + HR L+FCQM +++ I++
Sbjct: 1663 LDCGIGVEPTEGNLGAGASYVSPHRALVFCQMKEMLDIVQ 1702
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 721 (258.9 bits), Expect = 6.4e-70, Sum P(3) = 6.4e-70
Identities = 181/510 (35%), Positives = 271/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLM-EKKKNLGPYLVIV 602
G L YQ++GL W+ + + ILADEMGLGKTVQTI L L E+ + GPYLV
Sbjct: 629 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEQGHSKGPYLVSA 688
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVL 662
PLST+ NW EFE WAP VV Y G +R ++ + + N + + + K
Sbjct: 689 PLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQ 748
Query: 663 SKIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELW 714
K ++ + ID+ C + + N+ + +L + KL
Sbjct: 749 IKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTG 808
Query: 715 ALLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK 773
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 809 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLK 865
Query: 774 KEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQ 833
+V +P K E I++ ++S +QK Y+ + R + G G +L N ++
Sbjct: 866 ADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMMD 920
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + ++SGK LL ++L K ++ HRVL+
Sbjct: 921 LKKCCNHPYLFPVAAVE--APVLPNGSY-DGNSLVKSSGKLMLLQKMLKKLRDGGHRVLI 977
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGL
Sbjct: 978 FSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGL 1037
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1038 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRK 1097
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ KS GS + L IL
Sbjct: 1098 MMLTHLVVRPGL-GSKS-GSMTKQELDDIL 1125
Score = 567 (204.7 bits), Expect = 1.3e-52, Sum P(2) = 1.3e-52
Identities = 137/398 (34%), Positives = 212/398 (53%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 809 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 855
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R + G G
Sbjct: 856 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGN 910
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPK 180
+L N ++ L+K CNHP++F + + N + G + ++SGK LL ++L K
Sbjct: 911 QVSLLNIMMDLKKCCNHPYLFPVAAVE--APVLPNGSY-DGNSLVKSSGKLMLLQKMLKK 967
Query: 181 FKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
++ HRVL+F QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F
Sbjct: 968 LRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFC 1027
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVE
Sbjct: 1028 FLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVE 1087
Query: 301 ERILAAARYKLNMDEKEYHRNNTARTQKLNKA----IINYHINAXXXXXXXXXXXXXXXX 356
ERI A+ K+ + +++ + K I+ +
Sbjct: 1088 ERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGGVSDNKDV 1147
Query: 357 --XXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D+ KL+D+ +D L +EY+S+
Sbjct: 1148 DDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSS 1185
Score = 70 (29.7 bits), Expect = 6.4e-70, Sum P(3) = 6.4e-70
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQEW 1147
+G+G R RKQV+Y D S DQEW
Sbjct: 1238 LGKGKRIRKQVNYNDASQEDQEW 1260
Score = 43 (20.2 bits), Expect = 6.4e-70, Sum P(3) = 6.4e-70
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 506 EKKTEDDEYKDAGEE 520
E K E+DE ++ GEE
Sbjct: 325 EPKEEEDEEEEGGEE 339
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 732 (262.7 bits), Expect = 8.3e-70, Sum P(2) = 8.3e-70
Identities = 181/509 (35%), Positives = 272/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQTI L L ++ + GPYLV P
Sbjct: 644 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAP 703
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
LST+ NW EFE WAP VV Y G +R ++ + + N + + + K V
Sbjct: 704 LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQI 763
Query: 664 KIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
K ++ + ID+ C + + N+ + +L + KL
Sbjct: 764 KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGT 823
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 824 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 880
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+ + R + G G +L N ++ L
Sbjct: 881 DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK-----GGGNQVSLLNIMMDL 935
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + N + G + ++SGK LL ++L K ++ HRVL+F
Sbjct: 936 KKCCNHPYLFPVAAVE--APVLPNGSY-DGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIF 992
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 993 SQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1052
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K+
Sbjct: 1053 INLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKM 1112
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ KS GS + L IL
Sbjct: 1113 MLTHLVVRPGL-GSKS-GSMTKQELDDIL 1139
Score = 524 (189.5 bits), Expect = 2.4e-46, Sum P(2) = 2.4e-46
Identities = 110/271 (40%), Positives = 166/271 (61%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+ +
Sbjct: 853 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI 909
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R + G G +L N ++ L+K CNHP++F + + N +
Sbjct: 910 LTRNFEALNSK-----GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVE--APVLPNGSY-D 961
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K ++ HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 962 GSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT 1021
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAH
Sbjct: 1022 GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH 1081
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKL 311
RIGQ +V + R +T SVEERI A+ K+
Sbjct: 1082 RIGQNKKVMIYRFVTRASVEERITQVAKRKM 1112
Score = 155 (59.6 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 38/103 (36%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 823 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 869
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+ + R
Sbjct: 870 LGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR 912
Score = 56 (24.8 bits), Expect = 8.3e-70, Sum P(2) = 8.3e-70
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 1126 MGRGSRQRKQVDYTD-SLTDQE 1146
+G+G R RKQV+Y D S DQ+
Sbjct: 1248 LGKGKRIRKQVNYNDASQEDQD 1269
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 705 (253.2 bits), Expect = 9.4e-70, Sum P(3) = 9.4e-70
Identities = 150/343 (43%), Positives = 212/343 (61%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 150 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 206
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 207 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 266
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 267 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 326
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 327 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 378
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 379 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK--- 432
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 433 --ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 473
Score = 656 (236.0 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 155/342 (45%), Positives = 198/342 (57%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 386 LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDV 440
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + I SGK
Sbjct: 441 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMV 492
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E + FN
Sbjct: 493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN 552
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV R
Sbjct: 553 VPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 612
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILHQXXXXXXXXX 1054
LIT N+VEERI+ A KL +D VIQ G + DQ+S + E LQ I H
Sbjct: 613 LITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKMAKEEMLQMIRHGATHVFASKE 672
Query: 1055 XXXXXTVNQLIARTEDELTLFQKMDAERRKGETKPRLVEIKE 1096
++L ED TL ++ ER+ E RL ++ E
Sbjct: 673 -------SELT--DEDITTLLER--GERKTAEMNERLQKMGE 703
Score = 610 (219.8 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 132/262 (50%), Positives = 165/262 (62%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 386 LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDV 440
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + I SGK
Sbjct: 441 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMV 492
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E + FN
Sbjct: 493 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN 552
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV R
Sbjct: 553 VPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 612
Query: 293 LITVNSVEERILAAARYKLNMD 314
LIT N+VEERI+ A KL +D
Sbjct: 613 LITDNTVEERIVERAEIKLRLD 634
Score = 268 (99.4 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 62/145 (42%), Positives = 82/145 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 344 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 393
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 394 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSAGKMD 448
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 449 KMRLLNILMQLRKCCNHPYLFDGAE 473
Score = 65 (27.9 bits), Expect = 9.4e-70, Sum P(3) = 9.4e-70
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 894 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 950
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 951 KNYTEEEDRFLICMLHK 967
Score = 40 (19.1 bits), Expect = 9.4e-70, Sum P(3) = 9.4e-70
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 363 DEEGYRKLIDQKKDKRLAFLLSQTD 387
D E Y + + + KR FLL QT+
Sbjct: 83 DPE-YEEKMKADRAKRFEFLLKQTE 106
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 731 (262.4 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 179/509 (35%), Positives = 273/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKT+QTI L L ++ GP+LV P
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 793
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYE-FIIKDKSVL 662
LST+ NW EF+ WAP VV Y G +R ++ + + N + + F +K ++ +
Sbjct: 794 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 853
Query: 663 S----KIQWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
++ + ID+ C + + N+ + +L G + +KL
Sbjct: 854 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 913
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 914 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 970
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+++ R G G +L N ++ L
Sbjct: 971 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMDL 1025
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + G + ++SGK LL ++L K KE HRVL+F
Sbjct: 1026 KKCCNHPYLFP-VAAMESPKLPSG--AYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIF 1082
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1083 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1142
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1143 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1202
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ + GS + L IL
Sbjct: 1203 MLTHLVVRPGLGSK--AGSMSKQELDDIL 1229
Score = 539 (194.8 bits), Expect = 8.9e-48, Sum P(2) = 8.9e-48
Identities = 122/354 (34%), Positives = 191/354 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++
Sbjct: 943 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI 999
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R G G +L N ++ L+K CNHP++F + +
Sbjct: 1000 LTRNF-----EALNSRGGGNQVSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSG--AYE 1051
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K KE HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1052 GGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT 1111
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVIIFDSDWNPH D+QA RAH
Sbjct: 1112 GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH 1171
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN--YHI 338
RIGQ N+V + R +T SVEERI A+ K+ + ++ ++K ++
Sbjct: 1172 RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF 1231
Query: 339 NAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D E +L+D+ +D + +EY+S+
Sbjct: 1232 GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSS 1285
Score = 158 (60.7 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 959
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 960 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR 1002
Score = 55 (24.4 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQE 1146
+G+G R RKQV+Y D+ + +
Sbjct: 1337 LGKGKRVRKQVNYNDAAQEDQ 1357
Score = 47 (21.6 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 506 EKKTEDDEYKDAGEE 520
E K E++EY++ GEE
Sbjct: 431 EAKEEEEEYEEEGEE 445
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 731 (262.4 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 179/509 (35%), Positives = 273/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKT+QTI L L ++ GP+LV P
Sbjct: 793 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 852
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYE-FIIKDKSVL 662
LST+ NW EF+ WAP VV Y G +R ++ + + N + + F +K ++ +
Sbjct: 853 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 912
Query: 663 S----KIQWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
++ + ID+ C + + N+ + +L G + +KL
Sbjct: 913 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 972
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 973 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 1029
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+++ R G G +L N ++ L
Sbjct: 1030 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMDL 1084
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + G + ++SGK LL ++L K KE HRVL+F
Sbjct: 1085 KKCCNHPYLFP-VAAMESPKLPSG--AYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIF 1141
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1142 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1201
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1202 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1261
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ + GS + L IL
Sbjct: 1262 MLTHLVVRPGLGSK--AGSMSKQELDDIL 1288
Score = 539 (194.8 bits), Expect = 9.7e-48, Sum P(2) = 9.7e-48
Identities = 122/354 (34%), Positives = 191/354 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++
Sbjct: 1002 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI 1058
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R G G +L N ++ L+K CNHP++F + +
Sbjct: 1059 LTRNF-----EALNSRGGGNQVSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSG--AYE 1110
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K KE HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1111 GGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT 1170
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVIIFDSDWNPH D+QA RAH
Sbjct: 1171 GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH 1230
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN--YHI 338
RIGQ N+V + R +T SVEERI A+ K+ + ++ ++K ++
Sbjct: 1231 RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF 1290
Query: 339 NAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D E +L+D+ +D + +EY+S+
Sbjct: 1291 GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSS 1344
Score = 158 (60.7 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 972 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 1018
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 1019 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR 1061
Score = 55 (24.4 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQE 1146
+G+G R RKQV+Y D+ + +
Sbjct: 1396 LGKGKRVRKQVNYNDAAQEDQ 1416
Score = 47 (21.6 bits), Expect = 1.2e-69, Sum P(3) = 1.2e-69
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 506 EKKTEDDEYKDAGEE 520
E K E++EY++ GEE
Sbjct: 490 EAKEEEEEYEEEGEE 504
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 739 (265.2 bits), Expect = 1.3e-69, Sum P(2) = 1.3e-69
Identities = 184/510 (36%), Positives = 272/510 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKTVQT L L ++ + GP+LV P
Sbjct: 734 GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAP 793
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLS 663
LST+ NW EFE WAP VV Y G +R ++ + N + + K
Sbjct: 794 LSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRGGKKASKMKKEAAV 853
Query: 664 KIQ-----WKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
K ++ + ID+ + C + + N+ + +L PLQ+KL
Sbjct: 854 KFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGT 913
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++ +E+ I ++LH +L P +LRRLK
Sbjct: 914 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQI---KKLHDMLGPHMLRRLKA 970
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGAR-ALKNTIVQ 833
+V +P K E I++ ++S +QK Y+++ LT E T GG + +L N ++
Sbjct: 971 DVFKHMPSKTELIVRVELSPMQKKYYKYI------LTRNFEALNTRGGGNQVSLLNVVMD 1024
Query: 834 LRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLM 893
L+K CNHP++F + + N + G + + SGK LL ++L K KE HRVL+
Sbjct: 1025 LKKCCNHPYLFPTAATEAPK---MPNGMYDGSALTKASGKLMLLFKMLKKLKEGGHRVLI 1081
Query: 894 FCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGL 953
F QMT+++ +LED+ + Y R+DG R E + +FN P + F+FLLSTRAGGL
Sbjct: 1082 FSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQFVFLLSTRAGGL 1141
Query: 954 GLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYK 1013
G+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SVEERI A+ K
Sbjct: 1142 GINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASVEERITQVAKKK 1201
Query: 1014 LNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ + V++ G+ + GS + L IL
Sbjct: 1202 MMLTHLVVRPGLGSK--AGSMSKQELDDIL 1229
Score = 541 (195.5 bits), Expect = 3.4e-47, Sum P(2) = 3.4e-47
Identities = 125/312 (40%), Positives = 181/312 (58%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKV 60
PLQ+KL L L +F + + FN E ++ +E+ I ++LH +
Sbjct: 903 PLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADIAKEDQI---KKLHDM 959
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L P +LRRLK +V +P K E I++ ++S +QK Y+++ LT E T GG
Sbjct: 960 LGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYI------LTRNFEALNTRGGG 1013
Query: 121 AR-ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILP 179
+ +L N ++ L+K CNHP++F + + N + G + + SGK LL ++L
Sbjct: 1014 NQVSLLNVVMDLKKCCNHPYLFPTAATEAPK---MPNGMYDGSALTKASGKLMLLFKMLK 1070
Query: 180 KFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYF 239
K KE HRVL+F QMT+++ +LED+ + Y R+DG R E + +FN P + F
Sbjct: 1071 KLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQF 1130
Query: 240 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 299
+FLLSTRAGGLG+NL ADTVII+DSDWNPH D+QA RAHRIGQ +V + R +T SV
Sbjct: 1131 VFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASV 1190
Query: 300 EERILAAARYKL 311
EERI A+ K+
Sbjct: 1191 EERITQVAKKKM 1202
Score = 156 (60.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 40/103 (38%), Positives = 59/103 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F A A E++ I++LH +
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-ADIA--------KEDQ----IKKLHDM 959
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 960 LGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILTR 1002
Score = 47 (21.6 bits), Expect = 1.3e-69, Sum P(2) = 1.3e-69
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 1126 MGRGSRQRKQVDYTD 1140
+G+G R RK V+Y D
Sbjct: 1339 LGKGKRPRKPVNYND 1353
Score = 40 (19.1 bits), Expect = 7.1e-69, Sum P(2) = 7.1e-69
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1077 KMDAERRKGETKPRLVEIKELPDWMVKDDDEVENS 1111
K ++ K +T P E KEL D KD + E+S
Sbjct: 1676 KEESSEEKMDTSPASDEKKELKD--EKDGVKPEDS 1708
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 705 (253.2 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 151/343 (44%), Positives = 215/343 (62%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 159 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 215
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 216 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICF 275
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G AR A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 276 VGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 335
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 336 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 387
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E IK + GL K+ + +
Sbjct: 388 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKE--IKVYL-GLSKMQREWWYT 441
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
+ IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 442 K-ILMKDIDVLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 483
Score = 645 (232.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 145/292 (49%), Positives = 183/292 (62%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VL+PFLLRR+K +VE LP K E IK + GL K+ + + + IL+ D
Sbjct: 395 LVERLHAVLKPFLLRRIKTDVEKSLPPKKE--IKVYL-GLSKMQREWWYTK-ILMKDIDV 450
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + I SGK
Sbjct: 451 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMV 502
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG--ELLRK 933
+LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E +
Sbjct: 503 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREKKEAIEA 562
Query: 934 FNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRV 993
FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV
Sbjct: 563 FNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 622
Query: 994 LRLITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
RLIT N+VEERI+ A KL +D VIQ G + DQ+S + E LQ I H
Sbjct: 623 FRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRH 674
Score = 601 (216.6 bits), Expect = 5.7e-57, Sum P(2) = 5.7e-57
Identities = 133/264 (50%), Positives = 168/264 (63%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VL+PFLLRR+K +VE LP K E IK + GL K+ + + + IL+ D
Sbjct: 395 LVERLHAVLKPFLLRRIKTDVEKSLPPKKE--IKVYL-GLSKMQREWWYTK-ILMKDIDV 450
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + I SGK
Sbjct: 451 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVSNSGKMV 502
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG--ELLRK 230
+LD++L K KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E +
Sbjct: 503 VLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREKKEAIEA 562
Query: 231 FNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRV 290
FN P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV
Sbjct: 563 FNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 622
Query: 291 LRLITVNSVEERILAAARYKLNMD 314
RLIT N+VEERI+ A KL +D
Sbjct: 623 FRLITDNTVEERIVERAEIKLRLD 646
Score = 269 (99.8 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 63/145 (43%), Positives = 85/145 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 353 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 402
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E IK + GL K+ + + + IL+ D G+
Sbjct: 403 LKPFLLRRIKTDVEKSLPPKKE--IKVYL-GLSKMQREWWYTK-ILMKDIDVLNSAGKMD 458
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 459 KMRLLNILMQLRKCCNHPYLFDGAE 483
Score = 65 (27.9 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 906 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 962
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 963 KNYTEEEDRFLICMLHK 979
Score = 40 (19.1 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 362 EDEEGYRKLIDQKKD--KRLAFLLSQTD 387
E EE + +K D KR FLL QT+
Sbjct: 85 EYEEKMVNIFLEKADRAKRFEFLLKQTE 112
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 491 (177.9 bits), Expect = 1.9e-69, Sum P(4) = 1.9e-69
Identities = 117/332 (35%), Positives = 189/332 (56%)
Query: 540 IMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLT---YLMEKK-KNL 595
+ + L++YQ +G+ W+ L +L+GIL D+MGLGKT+QTI +++ ++ E+ K
Sbjct: 1296 VTIKATLRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVSSDHHIREENFKET 1355
Query: 596 G-------PYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVL 648
G P LVI P S + +W E ++AP V+ Y GSP R L+G++ ++ +V+
Sbjct: 1356 GSAEYRKLPSLVICPPSLIGHWEQEINQYAPFMKVLVYAGSPSIRIPLRGQIPDA--DVV 1413
Query: 649 LTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQN 708
+T+Y+ D L+K + ++DEGH +KN KL++++ + HR++L+GTP+QN
Sbjct: 1414 VTSYDVCRNDVESLTKHDYNYCVLDEGHIIKNASSKLSKSVKRV-KAEHRLILSGTPIQN 1472
Query: 709 KLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT-GEKVELNEEET-ILIIRRLHKVLRP 766
+ ELW+L +FL+P + F + F P A + K E+E L + LHK + P
Sbjct: 1473 NVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEAGALAMESLHKQVLP 1532
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN--RGILLTD--GSEKGKTGEG 822
F+LRRLK++V S LP K+ C++S LQK LY+ + + TD GSEK EG
Sbjct: 1533 FMLRRLKEDVLSDLPPKIIQDYYCELSDLQKKLYKDFAKTQKETIKTDVQGSEK----EG 1588
Query: 823 GARALKNTIVQLRKLCNHPFMFQNIEE-KYCQ 853
+ + +RKLCNHP + + + KY +
Sbjct: 1589 KTHVFQ-ALQYMRKLCNHPALVMSEQHPKYAE 1619
Score = 331 (121.6 bits), Expect = 1.9e-69, Sum P(4) = 1.9e-69
Identities = 63/138 (45%), Positives = 95/138 (68%)
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWR---DFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 943
++HR L+FCQ+ ++ I+E+ + + +++RLDG+T DR ++RKFNE S +
Sbjct: 1685 SEHRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPS-IDV 1743
Query: 944 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 1003
LL+T+ GGLGLNL ADTVI + DWNP DLQA DRAHR+GQK V V RLIT +++E
Sbjct: 1744 LLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLE 1803
Query: 1004 ERILAAARYKLNMDEKVI 1021
E+I+ ++K+N+ ++
Sbjct: 1804 EKIMGLQKFKMNIASTIV 1821
Score = 329 (120.9 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 64/142 (45%), Positives = 96/142 (67%)
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWR---DFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
++HR L+FCQ+ ++ I+E+ + + +++RLDG+T DR ++RKFNE S +
Sbjct: 1685 SEHRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNEDPS-IDV 1743
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
LL+T+ GGLGLNL ADTVI + DWNP DLQA DRAHR+GQK V V RLIT +++E
Sbjct: 1744 LLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLE 1803
Query: 301 ERILAAARYKLNMDEKEYHRNN 322
E+I+ ++K+N+ ++ N
Sbjct: 1804 EKIMGLQKFKMNIASTIVNQQN 1825
Score = 230 (86.0 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 58/157 (36%), Positives = 85/157 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT-GEKVELNEEET-ILIIRRLH 58
TP+QN + ELW+L +FL+P + F + F P A + K E+E L + LH
Sbjct: 1468 TPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEAGALAMESLH 1527
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN--RGILLTD--GSEKG 114
K + PF+LRRLK++V S LP K+ C++S LQK LY+ + + TD GSEK
Sbjct: 1528 KQVLPFMLRRLKEDVLSDLPPKIIQDYYCELSDLQKKLYKDFAKTQKETIKTDVQGSEK- 1586
Query: 115 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEE-KYCQ 150
EG + + +RKLCNHP + + + KY +
Sbjct: 1587 ---EGKTHVFQ-ALQYMRKLCNHPALVMSEQHPKYAE 1619
Score = 55 (24.4 bits), Expect = 2.7e-24, Sum P(3) = 2.7e-24
Identities = 23/99 (23%), Positives = 41/99 (41%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
A E+ + + K G T + H Y K+ +Q + KLKE I+ L ++
Sbjct: 1053 AAHERAVREAKIKRNGALMTLDQLVHIYGPKLFDQVT-----KLKEMMIEPLRYL----- 1102
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKK-KNLGPYLV 600
+ + DE+ + + +L L K K L P ++
Sbjct: 1103 SKTEEVSQDELKGQSVIDALGILRALFPKMDKELYPEVI 1141
Score = 42 (19.8 bits), Expect = 5.9e-23, Sum P(3) = 5.9e-23
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 546 LKEYQIKGLEWMVSLYNNNLNGILADEMGL 575
LKE +K E +V+L + +LN +L + L
Sbjct: 806 LKERGLKPNEKIVTLLSGSLNKVLQEPESL 835
Score = 41 (19.5 bits), Expect = 1.9e-69, Sum P(4) = 1.9e-69
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 364 EEGYRKLIDQKKDKRLAFLLSQTDE 388
++G KL+ + K L+ LLSQ ++
Sbjct: 297 QQGGNKLVVETKSSELSPLLSQQNK 321
Score = 38 (18.4 bits), Expect = 1.9e-69, Sum P(4) = 1.9e-69
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 519 EEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNL 565
EEA HE+ +A I NG L L+ +V +Y L
Sbjct: 1043 EEAQIDPTDAAAHERAVREAKIKRNGALMT-----LDQLVHIYGPKL 1084
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 702 (252.2 bits), Expect = 2.0e-69, Sum P(3) = 2.0e-69
Identities = 149/343 (43%), Positives = 212/343 (61%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E+ S E S + G L++YQI+GL W++SLY N +N
Sbjct: 151 RRTEQEEDEELLSESRKTSNVCVRFEV---SPSYVKGGPLRDYQIRGLNWLISLYENGVN 207
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W PS V+ +
Sbjct: 208 GILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 267
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G R A ++ M +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 268 VGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKL 327
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F S++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ K
Sbjct: 328 SEIVREF-KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------K 379
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
L +++ ++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 380 NCLGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK--- 433
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D +G+ L N ++QLRK CNHP++F E
Sbjct: 434 --ILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAE 474
Score = 647 (232.8 bits), Expect = 1.1e-59, Sum P(2) = 1.1e-59
Identities = 143/290 (49%), Positives = 180/290 (62%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 387 LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDV 441
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
+G+ L N ++QLRK CNHP++F E G T + I SGK
Sbjct: 442 LNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVGNSGKMV 493
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
LD++L + KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E + FN
Sbjct: 494 ALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN 553
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV R
Sbjct: 554 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 613
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
LIT N+VEERI+ A KL +D VIQ G + DQ+S + E LQ I H
Sbjct: 614 LITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRH 663
Score = 603 (217.3 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 131/262 (50%), Positives = 165/262 (62%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VL+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 387 LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDV 441
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
+G+ L N ++QLRK CNHP++F E G T + I SGK
Sbjct: 442 LNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDEHIVGNSGKMV 493
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
LD++L + KE RVL+F QMT+L+ ILEDY +WR + Y RLDG T E+R E + FN
Sbjct: 494 ALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN 553
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
P S FIF+LSTRAGGLG+NL +AD VI++DSDWNP DLQA DRAHRIGQK VRV R
Sbjct: 554 APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFR 613
Query: 293 LITVNSVEERILAAARYKLNMD 314
LIT N+VEERI+ A KL +D
Sbjct: 614 LITDNTVEERIVERAEIKLRLD 635
Score = 269 (99.8 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 62/145 (42%), Positives = 83/145 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K L +++ ++ RLH V
Sbjct: 345 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT-------KNCLGDQK---LVERLHAV 394
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE LP K E I +S +Q+ Y IL+ D +G+
Sbjct: 395 LKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTK-----ILMKDIDVLNSSGKMD 449
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 450 KMRLLNILMQLRKCCNHPYLFDGAE 474
Score = 65 (27.9 bits), Expect = 2.0e-69, Sum P(3) = 2.0e-69
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I ARYK + IQ G
Sbjct: 895 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKI---ARYKAPFHQLRIQYGTSKG 951
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 952 KNYTEEEDRFLICMLHK 968
Score = 39 (18.8 bits), Expect = 2.0e-69, Sum P(3) = 2.0e-69
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 363 DEEGYRKLIDQ--KKD--KRLAFLLSQTD 387
D E K+++ K D KR FLL QT+
Sbjct: 79 DPEYEEKMVNMPLKADRAKRFEFLLKQTE 107
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 730 (262.0 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 179/509 (35%), Positives = 273/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKT+QTI L L ++ GP+LV P
Sbjct: 690 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 749
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYE-FIIKDKSVL 662
LST+ NW EF+ WAP VV Y G +R ++ + + N + + F +K ++ +
Sbjct: 750 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 809
Query: 663 S----KIQWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
++ + ID+ C + + N+ + +L G + +KL
Sbjct: 810 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 869
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 870 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 926
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+++ R G G +L N ++ L
Sbjct: 927 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMDL 981
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + G + ++SGK LL ++L K KE HRVL+F
Sbjct: 982 KKCCNHPYLFP-VAAMESPKLPSG--AYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIF 1038
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1039 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1098
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1099 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1158
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ + GS + L IL
Sbjct: 1159 MLTHLVVRPGLGSK--AGSMSKQELDDIL 1185
Score = 537 (194.1 bits), Expect = 1.3e-47, Sum P(2) = 1.3e-47
Identities = 122/354 (34%), Positives = 191/354 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++
Sbjct: 899 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI 955
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R G G +L N ++ L+K CNHP++F + +
Sbjct: 956 LTRNF-----EALNSRGGGNQVSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSG--AYE 1007
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K KE HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1008 GGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT 1067
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVIIFDSDWNPH D+QA RAH
Sbjct: 1068 GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH 1127
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN--YHI 338
RIGQ N+V + R +T SVEERI A+ K+ + ++ ++K ++
Sbjct: 1128 RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF 1187
Query: 339 NAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D E +L+D+ +D + +EY+S+
Sbjct: 1188 GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATDDTDVQNMNEYLSS 1241
Score = 158 (60.7 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 869 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 915
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 916 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR 958
Score = 55 (24.4 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQE 1146
+G+G R RKQV+Y D+ + +
Sbjct: 1293 LGKGKRVRKQVNYNDAAQEDQ 1313
Score = 44 (20.5 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 506 EKKTEDDEYKDAGEE 520
E K E+++Y++ GEE
Sbjct: 388 EAKEEEEDYEEEGEE 402
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 730 (262.0 bits), Expect = 3.0e-69, Sum P(3) = 3.0e-69
Identities = 179/509 (35%), Positives = 273/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKT+QTI L L ++ GP+LV P
Sbjct: 785 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 844
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYE-FIIKDKSVL 662
LST+ NW EF+ WAP VV Y G +R ++ + + N + + F +K ++ +
Sbjct: 845 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 904
Query: 663 S----KIQWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
++ + ID+ C + + N+ + +L G + +KL
Sbjct: 905 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 964
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 965 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 1021
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+++ R G G +L N ++ L
Sbjct: 1022 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMDL 1076
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + G + ++SGK LL ++L K KE HRVL+F
Sbjct: 1077 KKCCNHPYLFP-VAAMESPKLPSG--AYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIF 1133
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1134 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1193
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1194 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1253
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ + GS + L IL
Sbjct: 1254 MLTHLVVRPGLGSK--AGSMSKQELDDIL 1280
Score = 537 (194.1 bits), Expect = 1.5e-47, Sum P(2) = 1.5e-47
Identities = 122/354 (34%), Positives = 191/354 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++
Sbjct: 994 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI 1050
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R G G +L N ++ L+K CNHP++F + +
Sbjct: 1051 LTRNF-----EALNSRGGGNQVSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSG--AYE 1102
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K KE HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1103 GGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT 1162
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVIIFDSDWNPH D+QA RAH
Sbjct: 1163 GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH 1222
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN--YHI 338
RIGQ N+V + R +T SVEERI A+ K+ + ++ ++K ++
Sbjct: 1223 RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF 1282
Query: 339 NAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D E +L+D+ +D + +EY+S+
Sbjct: 1283 GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATDDTDVQNMNEYLSS 1336
Score = 158 (60.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 964 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 1010
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 1011 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR 1053
Score = 55 (24.4 bits), Expect = 3.0e-69, Sum P(3) = 3.0e-69
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQE 1146
+G+G R RKQV+Y D+ + +
Sbjct: 1388 LGKGKRVRKQVNYNDAAQEDQ 1408
Score = 44 (20.5 bits), Expect = 3.0e-69, Sum P(3) = 3.0e-69
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 506 EKKTEDDEYKDAGEE 520
E K E+++Y++ GEE
Sbjct: 483 EAKEEEEDYEEEGEE 497
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 730 (262.0 bits), Expect = 3.3e-69, Sum P(3) = 3.3e-69
Identities = 179/509 (35%), Positives = 273/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKT+QTI L L ++ GP+LV P
Sbjct: 785 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 844
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYE-FIIKDKSVL 662
LST+ NW EF+ WAP VV Y G +R ++ + + N + + F +K ++ +
Sbjct: 845 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 904
Query: 663 S----KIQWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
++ + ID+ C + + N+ + +L G + +KL
Sbjct: 905 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 964
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 965 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 1021
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+++ R G G +L N ++ L
Sbjct: 1022 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMDL 1076
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + G + ++SGK LL ++L K KE HRVL+F
Sbjct: 1077 KKCCNHPYLFP-VAAMESPKLPSG--AYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIF 1133
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1134 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1193
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1194 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1253
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ + GS + L IL
Sbjct: 1254 MLTHLVVRPGLGSK--AGSMSKQELDDIL 1280
Score = 537 (194.1 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 122/354 (34%), Positives = 191/354 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++
Sbjct: 994 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI 1050
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R G G +L N ++ L+K CNHP++F + +
Sbjct: 1051 LTRNF-----EALNSRGGGNQVSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSG--AYE 1102
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + ++SGK LL ++L K KE HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1103 GGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT 1162
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVIIFDSDWNPH D+QA RAH
Sbjct: 1163 GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH 1222
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN--YHI 338
RIGQ N+V + R +T SVEERI A+ K+ + ++ ++K ++
Sbjct: 1223 RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF 1282
Query: 339 NAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D E +L+D+ +D + +EY+S+
Sbjct: 1283 GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATDDTDVQNMNEYLSS 1336
Score = 158 (60.7 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 964 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 1010
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 1011 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR 1053
Score = 55 (24.4 bits), Expect = 3.3e-69, Sum P(3) = 3.3e-69
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQE 1146
+G+G R RKQV+Y D+ + +
Sbjct: 1388 LGKGKRVRKQVNYNDAAQEDQ 1408
Score = 44 (20.5 bits), Expect = 3.3e-69, Sum P(3) = 3.3e-69
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 506 EKKTEDDEYKDAGEE 520
E K E+++Y++ GEE
Sbjct: 483 EAKEEEEDYEEEGEE 497
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 723 (259.6 bits), Expect = 6.7e-69, P = 6.7e-69
Identities = 154/347 (44%), Positives = 222/347 (63%)
Query: 507 KKTEDDEYKD--AGEEATYYSIAHTYHEK--VTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+KTE +E + A EE I TY E V+E S + +GKL++YQ++GL W++SL+
Sbjct: 144 RKTEKEEDAELMADEEE---EIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHE 200
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N L+GILADEMGLGKT+QTI+ L YL K+ GP+L+IVP STL NW EF KW P+ N
Sbjct: 201 NKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVN 260
Query: 623 VVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V+ G R + + + ++F+VL+T+YE +I++K+ L ++ W+ ++IDE HR+KN
Sbjct: 261 VLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNE 320
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
L+Q + FY S +R+L+TGTPLQN L ELWALLNFLLP IF F++WF
Sbjct: 321 QSALSQIIRLFY-SKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQ---- 375
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
+E++ ++I++LH VL PFLLRR+K +VE L K+E + M+ +Q Y+
Sbjct: 376 -----NNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYK 430
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
L + I +G+ GK EG R L N ++QLRK CNHP++F+ E
Sbjct: 431 SLLEKDIDAVNGAV-GKR-EGKTRLL-NIVMQLRKCCNHPYLFEGAE 474
Score = 629 (226.5 bits), Expect = 2.9e-58, P = 2.9e-58
Identities = 134/295 (45%), Positives = 192/295 (65%)
Query: 749 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 808
+E++ ++I++LH VL PFLLRR+K +VE L K+E + M+ +Q Y+ L + I
Sbjct: 378 SEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI 437
Query: 809 LLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY 868
+G+ GK EG R L N ++QLRK CNHP++F+ E G T + +
Sbjct: 438 DAVNGAV-GKR-EGKTRLL-NIVMQLRKCCNHPYLFEGAEP------GPPYT--TDEHLI 486
Query: 869 RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG 928
SGK +LD++L + KE RVL+F QM++L+ ILEDY +RDF Y R+DG+T E+R
Sbjct: 487 FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERI 546
Query: 929 ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQK 988
E + ++N+P S+ F+FLL+TRAGGLG+NL ADTVI+FDSDWNP DLQA DRAHRIGQK
Sbjct: 547 EAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQK 606
Query: 989 NEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQK-STGSERHEFLQTI 1042
+V V R +T N++EE+++ A KL +D+ VIQ G + S G+ + + L I
Sbjct: 607 KQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMI 661
Score = 611 (220.1 bits), Expect = 3.1e-57, Sum P(2) = 3.1e-57
Identities = 128/287 (44%), Positives = 185/287 (64%)
Query: 46 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 105
+E++ ++I++LH VL PFLLRR+K +VE L K+E + M+ +Q Y+ L + I
Sbjct: 378 SEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI 437
Query: 106 LLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY 165
+G+ GK EG R L N ++QLRK CNHP++F+ E G T + +
Sbjct: 438 DAVNGAV-GKR-EGKTRLL-NIVMQLRKCCNHPYLFEGAEP------GPPYT--TDEHLI 486
Query: 166 RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG 225
SGK +LD++L + KE RVL+F QM++L+ ILEDY +RDF Y R+DG+T E+R
Sbjct: 487 FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERI 546
Query: 226 ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQK 285
E + ++N+P S+ F+FLL+TRAGGLG+NL ADTVI+FDSDWNP DLQA DRAHRIGQK
Sbjct: 547 EAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQK 606
Query: 286 NEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA 332
+V V R +T N++EE+++ A KL +D+ + +T L +
Sbjct: 607 KQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNS 653
Score = 276 (102.2 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 63/145 (43%), Positives = 87/145 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP IF F++WF +E++ ++I++LH V
Sbjct: 342 TPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQ---------NNSEQDQEIVIQQLHSV 392
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L PFLLRR+K +VE L K+E + M+ +Q Y+ L + I +G+ GK EG
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAV-GKR-EGK 450
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
R L N ++QLRK CNHP++F+ E
Sbjct: 451 TRLL-NIVMQLRKCCNHPYLFEGAE 474
Score = 58 (25.5 bits), Expect = 3.1e-57, Sum P(2) = 3.1e-57
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 769 LRRLKKEVESQLPEKVEYIIKCDMSGLQKL--LYQHLHNRGILLTDGSEKGKTGEGGARA 826
+ +KK ++S+ PE+VE K L+++ ++LHN + G +K + +
Sbjct: 911 MENIKKSIDSKTPEEVEVYAKIFWERLKEINGWEKYLHNVEL----GEKKNEKLKFQETL 966
Query: 827 LKNTIVQLRKLCNHP 841
L+ I Q C HP
Sbjct: 967 LRQKIEQ----CKHP 977
Score = 39 (18.8 bits), Expect = 3.1e-55, Sum P(2) = 3.1e-55
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
+GEKK E ++++ H HE + + N + Y LE L
Sbjct: 952 LGEKKNEKLKFQETLLRQKIEQCKHPLHELIIQYPP---NNARRTYNT--LEDKFLLLAV 1006
Query: 564 NLNGILADEM 573
N G+ AD++
Sbjct: 1007 NKYGLRADKL 1016
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 730 (262.0 bits), Expect = 7.3e-69, Sum P(3) = 7.3e-69
Identities = 179/509 (35%), Positives = 272/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKT+QTI L L ++ GP+LV P
Sbjct: 732 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 791
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYE-FIIKDKSVL 662
LST+ NW EF+ WAP VV Y G +R ++ + + N + + F +K ++ +
Sbjct: 792 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 851
Query: 663 S----KIQWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
++ + ID+ C + + N+ + +L G + +KL
Sbjct: 852 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 911
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 912 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 968
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+++ R G G +L N ++ L
Sbjct: 969 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMDL 1023
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + G + + SGK LL ++L K KE HRVL+F
Sbjct: 1024 KKCCNHPYLFP-VAAMESPKLPSG--AYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIF 1080
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN P ++ F FLLSTRAGGLG
Sbjct: 1081 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLG 1140
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1141 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1200
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ + GS + L IL
Sbjct: 1201 MLTHLVVRPGLGSK--AGSMSKQELDDIL 1227
Score = 538 (194.4 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 122/354 (34%), Positives = 190/354 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++
Sbjct: 941 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI 997
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R G G +L N ++ L+K CNHP++F + +
Sbjct: 998 LTRNF-----EALNSRGGGNQVSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSG--AYE 1049
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + + SGK LL ++L K KE HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1050 GGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT 1109
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN P ++ F FLLSTRAGGLG+NL ADTVIIFDSDWNPH D+QA RAH
Sbjct: 1110 GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH 1169
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN--YHI 338
RIGQ N+V + R +T SVEERI A+ K+ + ++ ++K ++
Sbjct: 1170 RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF 1229
Query: 339 NAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D E +L+D+ +D + +EY+S+
Sbjct: 1230 GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSS 1283
Score = 158 (60.7 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 911 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 957
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 958 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR 1000
Score = 55 (24.4 bits), Expect = 7.3e-69, Sum P(3) = 7.3e-69
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQE 1146
+G+G R RKQV+Y D+ + +
Sbjct: 1335 LGKGKRVRKQVNYNDAAQEDQ 1355
Score = 40 (19.1 bits), Expect = 7.3e-69, Sum P(3) = 7.3e-69
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 506 EKKTEDDEYKDAGEE 520
E K E++EY++ EE
Sbjct: 430 EAKEEEEEYEEGEEE 444
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 699 (251.1 bits), Expect = 9.6e-69, Sum P(2) = 9.6e-69
Identities = 149/347 (42%), Positives = 211/347 (60%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+VG+ + E ++ E + A + E S + NG L++YQI+GL WM+SLY
Sbjct: 100 SVGDNRHRRTEQEEDEELLSESRKADNVLVRFEESPSYIKNGTLRDYQIRGLNWMISLYE 159
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N +NGILADEMGLGKT+QTIALL YL + GP++V+VP STL NW+ EF++W P+
Sbjct: 160 NGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLK 219
Query: 623 VVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V G+ R A ++ M +++V +T+YE +I++KSV K W+ ++IDE HR+KN
Sbjct: 220 AVCLIGNKDERAAFIRDVMMPGEWDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNE 279
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
KL++ F +++R+LLTGTPLQN L ELW+LLNFLLP +F S S F+ WF+
Sbjct: 280 KSKLSEIAREF-KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASDFDSWFDTNC-- 336
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
L +++ ++ RLH VLRPFLLRR+K EVE LP K E I +S +Q+ Y
Sbjct: 337 ------LGDQK---LVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYT 387
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 388 R-----ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 429
Score = 630 (226.8 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 141/290 (48%), Positives = 178/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K EVE LP K E I +S +Q+ Y IL+ D
Sbjct: 342 LVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTR-----ILMKDIDI 396
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 397 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDTHLVINSGKMV 448
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
LD++LPK +E RVL+F QMT+++ ILEDY +WR F Y RLDG T E R + + FN
Sbjct: 449 ALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFN 508
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
P S FIF+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ+ V+V R
Sbjct: 509 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFR 568
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
LIT N+VEERI+ A KL +D VIQ G + DQ++ + E LQ I H
Sbjct: 569 LITDNTVEERIVERAEMKLRLDSIVIQQGRLIDQQNKLG-KDEMLQMIRH 617
Score = 599 (215.9 bits), Expect = 9.1e-57, Sum P(2) = 9.1e-57
Identities = 130/262 (49%), Positives = 163/262 (62%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K EVE LP K E I +S +Q+ Y IL+ D
Sbjct: 342 LVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTR-----ILMKDIDI 396
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 397 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDTHLVINSGKMV 448
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
LD++LPK +E RVL+F QMT+++ ILEDY +WR F Y RLDG T E R + + FN
Sbjct: 449 ALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFN 508
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
P S FIF+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ+ V+V R
Sbjct: 509 APNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFR 568
Query: 293 LITVNSVEERILAAARYKLNMD 314
LIT N+VEERI+ A KL +D
Sbjct: 569 LITDNTVEERIVERAEMKLRLD 590
Score = 271 (100.5 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 63/145 (43%), Positives = 82/145 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFLLP +F S S F+ WF+ L +++ ++ RLH V
Sbjct: 301 TPLQNNLHELWSLLNFLLPDVFNSASDFDSWFDTNC--------LGDQK---LVERLHAV 349
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K EVE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 350 LRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTR-----ILMKDIDILNSAGKMD 404
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 405 KMRLLNILMQLRKCCNHPYLFDGAE 429
Score = 64 (27.6 bits), Expect = 9.6e-69, Sum P(2) = 9.6e-69
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQK 1029
W +LQ ++ ++ E R+ R I++ + + ARYK + IQ G K
Sbjct: 873 WERCNELQDIEKIMAQIERGEARIQRRISIKKALD--VKIARYKAPFHQLRIQYGTNKGK 930
Query: 1030 STGSERHEFLQTILHQ 1045
+ E FL +LH+
Sbjct: 931 NYTEEEDRFLICMLHK 946
Score = 40 (19.1 bits), Expect = 3.1e-54, Sum P(2) = 3.1e-54
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 772 LKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 853 IAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQ 888
>POMBASE|SPBC1826.01c [details] [associations]
symbol:mot1 "TATA-binding protein associated factor
Mot1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017025 "TBP-class
protein binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC1826.01c GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0006355 GO:GO:0003677 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006366 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0017025 EMBL:AB027981 PIR:T39739
RefSeq:NP_596080.2 ProteinModelPortal:O43065 STRING:O43065
EnsemblFungi:SPBC1826.01c.1 GeneID:2539633 KEGG:spo:SPBC1826.01c
OrthoDB:EOG44XNQZ NextBio:20800788 Uniprot:O43065
Length = 1953
Score = 487 (176.5 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 121/333 (36%), Positives = 185/333 (55%)
Query: 540 IMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLT---YLMEKK-KNL 595
+ ++ L++YQ +G+ W+ L L+GIL D+MGLGKT+QTI ++ Y +K +
Sbjct: 1352 VPISADLRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEES 1411
Query: 596 G-------PYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVL 648
G P L++ P + +W E +AP V AY G P R ++ +MK S +V+
Sbjct: 1412 GSPKFAHVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRSKMKKS--DVV 1469
Query: 649 LTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQN 708
+T+Y+ D L KI W ++DEGH +KN KLT+ + + S HR++L+GTP+QN
Sbjct: 1470 VTSYDICRNDVDELVKIDWNYCVLDEGHVIKNARAKLTKAVKSL-RSYHRLILSGTPIQN 1528
Query: 709 KLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEET-ILIIRRLHKVLRP 766
+ ELW+L +FL+P + TF++ F P A + + K E E L + +HK + P
Sbjct: 1529 NVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLP 1588
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSGLQ-KLLYQHLHNRGI---LLTDGSEKGKTGEG 822
F+LRRLK++V + LP K+ CDMS LQ KLL + I L D +EK + G
Sbjct: 1589 FMLRRLKEDVLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQ-GTR 1647
Query: 823 GARALKNTIVQ----LRKLCNHPFMFQNIEEKY 851
++ K I Q +RKLCNHP + + EK+
Sbjct: 1648 KKKSQKAHIFQALQYMRKLCNHPALI--LTEKH 1678
Score = 321 (118.1 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 67/152 (44%), Positives = 95/152 (62%)
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWR---DFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 943
++HRVL+FCQ+ ++ ++E + D +Y+RLDG+ + R E + KFN S +
Sbjct: 1735 SEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPS-IDV 1793
Query: 944 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 1003
LL+T GGLGLNL ADTVI + DWNP +DLQA DRAHRIGQK V V RLIT +E
Sbjct: 1794 LLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLE 1853
Query: 1004 ERILAAARYKLNMDEKVIQAGMFDQKSTGSER 1035
E+I+ R+K+N+ V+ S G+++
Sbjct: 1854 EKIMGLQRFKMNVASTVVNQQNAGLSSIGTDQ 1885
Score = 316 (116.3 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 65/142 (45%), Positives = 91/142 (64%)
Query: 184 TKHRVLMFCQMTQLMTILEDYFIWR---DFSYLRLDGTTKSEDRGELLRKFNEPESKYFI 240
++HRVL+FCQ+ ++ ++E + D +Y+RLDG+ + R E + KFN S +
Sbjct: 1735 SEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPS-IDV 1793
Query: 241 FLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVE 300
LL+T GGLGLNL ADTVI + DWNP +DLQA DRAHRIGQK V V RLIT +E
Sbjct: 1794 LLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLE 1853
Query: 301 ERILAAARYKLNMDEKEYHRNN 322
E+I+ R+K+N+ ++ N
Sbjct: 1854 EKIMGLQRFKMNVASTVVNQQN 1875
Score = 217 (81.4 bits), Expect = 3.3e-41, Sum P(2) = 3.3e-41
Identities = 60/158 (37%), Positives = 87/158 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEET-ILIIRRLH 58
TP+QN + ELW+L +FL+P + TF++ F P A + + K E E L + +H
Sbjct: 1524 TPIQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIH 1583
Query: 59 KVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ-KLLYQHLHNRGI---LLTDGSEKG 114
K + PF+LRRLK++V + LP K+ CDMS LQ KLL + I L D +EK
Sbjct: 1584 KQVLPFMLRRLKEDVLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKT 1643
Query: 115 KTGEGGARALKNTIVQ----LRKLCNHPFMFQNIEEKY 148
+ G ++ K I Q +RKLCNHP + + EK+
Sbjct: 1644 Q-GTRKKKSQKAHIFQALQYMRKLCNHPALI--LTEKH 1678
Score = 46 (21.3 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 284 QKNEVRVLRL-ITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIINYH 337
+K++V V I N V+E + Y + +DE +N A+ K K++ +YH
Sbjct: 1464 KKSDVVVTSYDICRNDVDELVKIDWNYCV-LDEGHVIKNARAKLTKAVKSLRSYH 1517
Score = 43 (20.2 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 687 QTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
Q + +S L+ PL+ LP+ L +LL S K EQ N
Sbjct: 1292 QDVRVLATTSFATLVKLVPLEAGLPDPPDLPQYLLDSREKERKFLEQMLN 1341
Score = 37 (18.1 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 76 QLPEKVEYIIKCDMSGLQK 94
+LP+K+ IIK M ++K
Sbjct: 991 KLPKKLNSIIKGIMESIKK 1009
Score = 37 (18.1 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 33
PL+ LP+ L +LL S K EQ N
Sbjct: 1310 PLEAGLPDPPDLPQYLLDSREKERKFLEQMLN 1341
Score = 37 (18.1 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 779 QLPEKVEYIIKCDMSGLQK 797
+LP+K+ IIK M ++K
Sbjct: 991 KLPKKLNSIIKGIMESIKK 1009
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 722 (259.2 bits), Expect = 2.6e-68, P = 2.6e-68
Identities = 187/496 (37%), Positives = 272/496 (54%)
Query: 542 VNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVI 601
+ G L YQ++GL ++ ++ + ILADEMGLGKT+Q+IALL L E+ NL P+LVI
Sbjct: 269 LKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEE--NLIPHLVI 326
Query: 602 VPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYEFIIKDKS- 660
PLSTL NW EF WAP NVV Y G+ AR + + +F L + I K KS
Sbjct: 327 APLSTLRNWEREFATWAPQMNVVMYFGTAQARAVI----REHEF-YLSKDQKKIKKKKSG 381
Query: 661 -VLSKIQWKCMIID---EGHRMKNHHCKLTQTLN---TFYNSSHRVLLTGTPLQNKLPEL 713
+ S+ + K + D + M N + + + + HR+ + L + L +
Sbjct: 382 QISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQY 441
Query: 714 WALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNE--EETILI-----IRRLHKVLRP 766
+ LL + E + F G+ L E EE I I RLHK+L P
Sbjct: 442 SSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAP 501
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGAR- 825
LLRR+KK+V +P K E I++ D+S LQK Y+ + R + T +GGA+
Sbjct: 502 HLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVL-------TKKGGAQI 554
Query: 826 ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFK 885
+L N +++LRK+C HP+M + +E I N + + GK +LLD+++ K K
Sbjct: 555 SLNNIMMELRKVCCHPYMLEGVEPV----IHDANEAFK--QLLESCGKLQLLDKMMVKLK 608
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
E HRVL++ Q ++ +LEDY + + Y R+DG +R + +FN S F FL
Sbjct: 609 EQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFL 668
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
LSTRAGGLG+NL ADTVII+DSDWNPH DLQA RAHR+GQ N+V + RLI ++EER
Sbjct: 669 LSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEER 728
Query: 1006 ILAAARYKLNMDEKVI 1021
++ + K+ ++ V+
Sbjct: 729 MMQLTKKKMVLEHLVV 744
Score = 541 (195.5 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 118/289 (40%), Positives = 175/289 (60%)
Query: 44 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
++N+EE I RLHK+L P LLRR+KK+V +P K E I++ D+S LQK Y+ + R
Sbjct: 485 DINQEEQI---SRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTR 541
Query: 104 GILLTDGSEKGKTGEGGAR-ALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 162
+ T +GGA+ +L N +++LRK+C HP+M + +E I N
Sbjct: 542 NYQVL-------TKKGGAQISLNNIMMELRKVCCHPYMLEGVEPV----IHDANEAFK-- 588
Query: 163 DIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSE 222
+ + GK +LLD+++ K KE HRVL++ Q ++ +LEDY + + Y R+DG
Sbjct: 589 QLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGA 648
Query: 223 DRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRI 282
+R + +FN S F FLLSTRAGGLG+NL ADTVII+DSDWNPH DLQA RAHR+
Sbjct: 649 ERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRL 708
Query: 283 GQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
GQ N+V + RLI ++EER++ + K+ ++ + +TQ +N+
Sbjct: 709 GQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGK---LKTQNINQ 754
Score = 172 (65.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 43/103 (41%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ L++FL F S F++ F ++N+EE I RLHK+
Sbjct: 452 TPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK----------DINQEEQI---SRLHKM 498
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P LLRR+KK+V +P K E I++ D+S LQK Y+ + R
Sbjct: 499 LAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTR 541
Score = 41 (19.5 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 794 GLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 824
G+Q+L+ + L+ I L+ + G G+ G+
Sbjct: 1099 GIQELICKELNFPHISLSAAEQAGLQGQNGS 1129
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 721 (258.9 bits), Expect = 3.6e-68, P = 3.6e-68
Identities = 194/521 (37%), Positives = 293/521 (56%)
Query: 537 QASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLG 596
Q S + G L YQ+KGL W+ + + ILADEMGLGKTVQ I+ ++ L + K
Sbjct: 547 QPSFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKCF- 605
Query: 597 PYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQG-RMKNSKFNVLLTTYEFI 655
P LVIVP +T++NW E +KWAP + GS R ++ R+ N K ++T+ +
Sbjct: 606 PVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVSTHVLV 665
Query: 656 IKDKSVLSKI----QWKCMIIDEGHRMKNHHCKLTQTLNTFYNSS----HRVLLTGTPLQ 707
I +V +I +++ ++ + K Q+ +Y SS ++LLTGTPLQ
Sbjct: 666 ISASNVEREISLLRKFQWKVLIVD---EGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQ 722
Query: 708 NKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPF 767
N + EL+ LL FL P K NA A ++ + + E + LH++L+PF
Sbjct: 723 NNVRELFNLLQFLNP--MK--------INA--AELEKRYSIIDTEKVT---ELHQILKPF 767
Query: 768 LLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGE-GGAR 825
LRR+K EV P KVE II M+ +QK LY+ + ++ + LL + + T GG R
Sbjct: 768 FLRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSSGGQR 827
Query: 826 --ALKNTIVQLRKLCNHPFMFQ-NIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILP 882
+L N ++QLRK HP+++ +IE++ + ++ + S KF +L ++P
Sbjct: 828 TTSLNNILMQLRKTLAHPYIYSPDIEDRNLPY------ELAMRSLEEASCKFLILRLLVP 881
Query: 883 KFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYF 942
K HR+L+F Q Q + ILED+F +++ +Y R DG + +R + FN P S+
Sbjct: 882 KLITRGHRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELS 941
Query: 943 IFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSV 1002
FLLSTRAGG+G+NL +ADTVII D D+NPHQD+QA RAHR GQK +V V L T +SV
Sbjct: 942 CFLLSTRAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSV 1001
Query: 1003 EERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
EE+I+ A+ KL +D ++++ DQ SE+ L++IL
Sbjct: 1002 EEKIIQNAQKKLVLDHLIVES--LDQNHN-SEKD--LESIL 1037
Score = 511 (184.9 bits), Expect = 9.4e-44, Sum P(2) = 9.4e-44
Identities = 128/319 (40%), Positives = 187/319 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + EL+ LL FL P K NA A ++ + + E + LH++
Sbjct: 719 TPLQNNVRELFNLLQFLNP--MK--------INA--AELEKRYSIIDTEKVT---ELHQI 763
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGE- 118
L+PF LRR+K EV P KVE II M+ +QK LY+ + ++ + LL + + T
Sbjct: 764 LKPFFLRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNLSLLRNITGYANTSSS 823
Query: 119 GGAR--ALKNTIVQLRKLCNHPFMFQ-NIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLD 175
GG R +L N ++QLRK HP+++ +IE++ + ++ + S KF +L
Sbjct: 824 GGQRTTSLNNILMQLRKTLAHPYIYSPDIEDRNLPY------ELAMRSLEEASCKFLILR 877
Query: 176 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 235
++PK HR+L+F Q Q + ILED+F +++ +Y R DG + +R + FN P
Sbjct: 878 LLVPKLITRGHRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPN 937
Query: 236 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 295
S+ FLLSTRAGG+G+NL +ADTVII D D+NPHQD+QA RAHR GQK +V V L T
Sbjct: 938 SELSCFLLSTRAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTT 997
Query: 296 VNSVEERILAAARYKLNMD 314
+SVEE+I+ A+ KL +D
Sbjct: 998 RDSVEEKIIQNAQKKLVLD 1016
Score = 41 (19.5 bits), Expect = 9.4e-44, Sum P(2) = 9.4e-44
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 580 QTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGR 639
+TI+ +T + K+ L Y V + L++ E + SA+V + S LA+ L
Sbjct: 1181 ETISSITDTLSDKQKL-KYDSSVNIENLND---ESDS-QKSADV--HFDSILAKSLLATT 1233
Query: 640 MKNSKFNVLLTTYEFIIKDKSVLSK 664
K +FN L+T + +K S+
Sbjct: 1234 PKEDEFNKTLSTINLEVANKLTSSE 1258
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 721 (258.9 bits), Expect = 3.8e-68, Sum P(3) = 3.8e-68
Identities = 178/509 (34%), Positives = 271/509 (53%)
Query: 544 GKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVP 603
G L YQ++GL W+ + + ILADEMGLGKT+QTI L L ++ GP+LV P
Sbjct: 730 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAP 789
Query: 604 LSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFNVLLTTYE-FIIKDKSVL 662
LST+ NW EF+ WAP VV Y G +R ++ + + N + + F +K ++ +
Sbjct: 790 LSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQV 849
Query: 663 S----KIQWKCMIIDEGHRMK-NHHCKLTQTLNTFYNSSHRV--LLTGTPLQNKLPELWA 715
++ + ID+ C + + N+ + +L G + +KL
Sbjct: 850 KFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGT 909
Query: 716 LLNFLLPSIFKSCSTFE-QWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKK 774
L L +F + + FN E ++++E+ I ++LH +L P +LRRLK
Sbjct: 910 PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI---KKLHDLLGPHMLRRLKA 966
Query: 775 EVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQL 834
+V +P K E I++ ++S +QK Y+++ R G G +L N ++ L
Sbjct: 967 DVFKNMPAKTELIVRVELSPMQKKYYKYILTRNF-----EALNSRGGGNQVSLLNIMMDL 1021
Query: 835 RKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMF 894
+K CNHP++F + + G + + SGK LL ++L K KE HRVL+F
Sbjct: 1022 KKCCNHPYLFP-VAAMESPKLPSG--AYEGGALIKASGKLMLLQKMLRKLKEQGHRVLIF 1078
Query: 895 CQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLG 954
QMT+++ +LED+ + + Y R+DG R E + +FN ++ F FLLSTRAGGLG
Sbjct: 1079 SQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAHGAQQFCFLLSTRAGGLG 1138
Query: 955 LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKL 1014
+NL ADTVIIFDSDWNPH D+QA RAHRIGQ N+V + R +T SVEERI A+ K+
Sbjct: 1139 INLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKM 1198
Query: 1015 NMDEKVIQAGMFDQKSTGSERHEFLQTIL 1043
+ V++ G+ + GS + L IL
Sbjct: 1199 MLTHLVVRPGLGSK--AGSMSKQELDDIL 1225
Score = 529 (191.3 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 121/354 (34%), Positives = 189/354 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E ++++E+ I ++LH +L P +LRRLK +V +P K E I++ ++S +QK Y+++
Sbjct: 939 EFADISKEDQI---KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI 995
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVS 160
R G G +L N ++ L+K CNHP++F + +
Sbjct: 996 LTRNF-----EALNSRGGGNQVSLLNIMMDLKKCCNHPYLFP-VAAMESPKLPSG--AYE 1047
Query: 161 GPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTK 220
G + + SGK LL ++L K KE HRVL+F QMT+++ +LED+ + + Y R+DG
Sbjct: 1048 GGALIKASGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGIT 1107
Query: 221 SEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAH 280
R E + +FN ++ F FLLSTRAGGLG+NL ADTVIIFDSDWNPH D+QA RAH
Sbjct: 1108 GALRQEAIDRFNAHGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAH 1167
Query: 281 RIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN--YHI 338
RIGQ N+V + R +T SVEERI A+ K+ + ++ ++K ++
Sbjct: 1168 RIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSKQELDDILKF 1227
Query: 339 NAXXXXXXXXXXXXXXXXXXLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN 392
++ D E +L+D+ +D + +EY+S+
Sbjct: 1228 GTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSS 1281
Score = 158 (60.7 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L EL+ LLNFL P F + F + F ++++E+ I ++LH +
Sbjct: 909 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEF----------ADISKEDQI---KKLHDL 955
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
L P +LRRLK +V +P K E I++ ++S +QK Y+++ R
Sbjct: 956 LGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTR 998
Score = 55 (24.4 bits), Expect = 3.8e-68, Sum P(3) = 3.8e-68
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1126 MGRGSRQRKQVDYTDSLTDQE 1146
+G+G R RKQV+Y D+ + +
Sbjct: 1333 LGKGKRVRKQVNYNDAAQEDQ 1353
Score = 44 (20.5 bits), Expect = 3.8e-68, Sum P(3) = 3.8e-68
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 506 EKKTEDDEYKDAGEE 520
E K E+++Y++ GEE
Sbjct: 427 EAKEEEEDYEEEGEE 441
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 707 (253.9 bits), Expect = 9.1e-68, Sum P(3) = 9.1e-68
Identities = 155/355 (43%), Positives = 216/355 (60%)
Query: 509 TEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGI 568
TE+ E + E H+++ T + +G +++YQ+ GL W++ LY +NGI
Sbjct: 240 TEEAEDEAIMNETMEEEEPHSFNF-FTSSPPYIKSGTMRDYQVYGLNWLIQLYERGINGI 298
Query: 569 LADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKG 628
LADEMGLGKT+QTI+LL YL E K GP+L+I P STLS W EF +W P VV + G
Sbjct: 299 LADEMGLGKTLQTISLLGYLSEYKGIRGPHLIIAPKSTLSGWAKEFTRWCPFLRVVRFHG 358
Query: 629 SPLARRALQ-GRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQ 687
S R ++ ++ KF+V +TTYE I++KS K W+ +IIDE HR+KN + L++
Sbjct: 359 SKEEREDIKKNQLIFKKFDVCITTYEVAIREKSTFKKFSWRYIIIDEAHRIKNENSVLSK 418
Query: 688 TLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVE 747
+ F NS R+L+TGTPLQN L ELW+LLNFLLP +F S F++WF+ A E
Sbjct: 419 GVRMF-NSQFRLLITGTPLQNNLHELWSLLNFLLPDVFSSSDDFDKWFD--LANNTE--- 472
Query: 748 LNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRG 807
N++E +I +LHKVLRPFLLRR+K EVE LP K E + +S +QK Y+ L ++
Sbjct: 473 -NQQE---VIDKLHKVLRPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKD 528
Query: 808 ILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEK-YC--QHIGQNN 859
+ KG TG R L N +QLRK CNHP++F EE+ Y +H+ N+
Sbjct: 529 LDAVVVGAKGNTGR--VRLL-NICMQLRKACNHPYLFDGAEEEPYTTGEHLIDNS 580
Score = 615 (221.5 bits), Expect = 8.6e-55, Sum P(3) = 8.6e-55
Identities = 133/291 (45%), Positives = 178/291 (61%)
Query: 749 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 808
N E +I +LHKVLRPFLLRR+K EVE LP K E + +S +QK Y+ L ++ +
Sbjct: 470 NTENQQEVIDKLHKVLRPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDL 529
Query: 809 LLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY 868
KG TG R L N +QLRK CNHP++F EE+ +G +
Sbjct: 530 DAVVVGAKGNTGR--VRLL-NICMQLRKACNHPYLFDGAEEE---------PYTTGEHLI 577
Query: 869 RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG 928
SGK LLD++L K KE RVL+F QM++++ ILEDY ++R + Y R+DG+T+S R
Sbjct: 578 DNSGKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIVRE 637
Query: 929 ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQK 988
+ +N+P S F FLL+TRAGGLG+ L AD VI+FDSDWNP DLQAQDRAHRIGQ
Sbjct: 638 NSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQT 697
Query: 989 NEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFL 1039
V V R +T NS+EE+++ A KL +D VIQ G + + ++ E L
Sbjct: 698 KPVTVYRFVTENSMEEKMVEKAEMKLQLDALVIQQGRLVEANKNAKPEELL 748
Score = 594 (214.2 bits), Expect = 3.7e-54, Sum P(4) = 3.7e-54
Identities = 127/269 (47%), Positives = 168/269 (62%)
Query: 46 NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI 105
N E +I +LHKVLRPFLLRR+K EVE LP K E + +S +QK Y+ L ++ +
Sbjct: 470 NTENQQEVIDKLHKVLRPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDL 529
Query: 106 LLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY 165
KG TG R L N +QLRK CNHP++F EE+ +G +
Sbjct: 530 DAVVVGAKGNTGR--VRLL-NICMQLRKACNHPYLFDGAEEE---------PYTTGEHLI 577
Query: 166 RTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRG 225
SGK LLD++L K KE RVL+F QM++++ ILEDY ++R + Y R+DG+T+S R
Sbjct: 578 DNSGKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIVRE 637
Query: 226 ELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQK 285
+ +N+P S F FLL+TRAGGLG+ L AD VI+FDSDWNP DLQAQDRAHRIGQ
Sbjct: 638 NSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQT 697
Query: 286 NEVRVLRLITVNSVEERILAAARYKLNMD 314
V V R +T NS+EE+++ A KL +D
Sbjct: 698 KPVTVYRFVTENSMEEKMVEKAEMKLQLD 726
Score = 302 (111.4 bits), Expect = 2.0e-21, Sum P(4) = 2.0e-21
Identities = 72/159 (45%), Positives = 96/159 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFLLP +F S F++WF+ A E N++E +I +LHKV
Sbjct: 434 TPLQNNLHELWSLLNFLLPDVFSSSDDFDKWFD--LANNTE----NQQE---VIDKLHKV 484
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K EVE LP K E + +S +QK Y+ L ++ + KG TG
Sbjct: 485 LRPFLLRRIKTEVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDLDAVVVGAKGNTGR-- 542
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEK-YC--QHIGQNN 156
R L N +QLRK CNHP++F EE+ Y +H+ N+
Sbjct: 543 VRLL-NICMQLRKACNHPYLFDGAEEEPYTTGEHLIDNS 580
Score = 56 (24.8 bits), Expect = 9.1e-68, Sum P(3) = 9.1e-68
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 970 WNPHQDLQAQDR-AHRIGQKNEVRVLRLI-TVNSVEERILAAARYKLNMDEKVIQAGMFD 1027
W H ++ ++ RI +K E R+++ T +S+ +I +YK E IQ G+
Sbjct: 976 WKKHSEVADHEKLVARI-EKGEERIMKYKETQDSLNYKI---NKYKNPWIELKIQYGLKK 1031
Query: 1028 QKSTGSERHEFLQTILHQ 1045
K+ E FL + H+
Sbjct: 1032 NKNYNDEEDIFLVCMCHR 1049
Score = 40 (19.1 bits), Expect = 3.7e-54, Sum P(4) = 3.7e-54
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 707 QNKLPE-LWALLNFLLPSIFKSCST 730
+N PE L A+L F IFKS S+
Sbjct: 740 KNAKPEELLAMLRFGADDIFKSKSS 764
Score = 39 (18.8 bits), Expect = 9.1e-68, Sum P(3) = 9.1e-68
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 1066 ARTED-ELTLFQKMDAERRKGETKPRLVEIKELP 1098
A+TE TL ++ DA K KP K P
Sbjct: 1129 AKTESPNKTLGKRKDAPPSKPPAKPSKASAKSKP 1162
Score = 38 (18.4 bits), Expect = 8.6e-55, Sum P(3) = 8.6e-55
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 277 DRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
D AHRI +N V + NS ++ + N+ E
Sbjct: 404 DEAHRIKNENSVLSKGVRMFNSQFRLLITGTPLQNNLHE 442
Score = 38 (18.4 bits), Expect = 2.8e-52, Sum P(4) = 2.8e-52
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 767 FLLRRLKKEVESQLPEKVEYIIK 789
F+ R +E+++++ + ++YIIK
Sbjct: 1073 FIQTRTCQELKARVDQLLKYIIK 1095
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 714 (256.4 bits), Expect = 1.5e-67, Sum P(2) = 1.5e-67
Identities = 207/638 (32%), Positives = 322/638 (50%)
Query: 537 QASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLG 596
Q IM G++ +YQ GL W+ + N ILADEMGLGKT+Q I LL L++ K
Sbjct: 597 QPRIMTGGEIMDYQRDGLNWLYFKWFKQQNAILADEMGLGKTIQVIGLLATLVQDHK-CW 655
Query: 597 PYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARR-ALQGRM-----KNSKFNVLLT 650
P+L++VP ST NW E + W PS V Y GS LAR+ A + M + + +V++T
Sbjct: 656 PFLIVVPNSTCPNWRKELKTWVPSLRAVTYYGSSLARKMAQEHEMFIRGDPDLRCHVVIT 715
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNS------SHRVLLTGT 704
+YE ++ D K+ + I + + +L + Y +VL+TGT
Sbjct: 716 SYETMVDDSC--RKVLSR---IPWAGLIVDEGQRLKSDKSQIYEGLSKMKFPFKVLMTGT 770
Query: 705 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 764
PLQN EL+ LL F S K+ E+ + L++E I LH+++
Sbjct: 771 PLQNNTKELFNLLQFCDQS--KNAEELEEKYGT----------LSKEN----IPELHELI 814
Query: 765 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL--HNRGIL--LTDGSEKGKTG 820
RPF LRR K +V + LP V+ I+ MS LQK LY+ + N ++ + +E+ +
Sbjct: 815 RPFFLRRTKAQVLTFLPPVVQIIVPVTMSVLQKKLYKSILAKNTQLIKAIFQRNEEDQPL 874
Query: 821 EGGARA-LKNTIVQLRKLCNHPFMFQN-IEEKYCQHIGQNNTVVSGPDIYRTSGKFELLD 878
+ R L N ++QLRK HPF+F IEE+ ++ V+ ++ +GK +LL+
Sbjct: 875 KQTERHNLNNILMQLRKCLCHPFIFSKAIEER------TDDPEVAHRNLVDAAGKLQLLE 928
Query: 879 RILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPE 938
+LPK + HRVL+F Q + + ++ED+ + RLDG S ++ ++ +N
Sbjct: 929 LMLPKLQARGHRVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAEN 988
Query: 939 SKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLIT 998
S YF FLLSTR+GG+G+NL ADTVII D D+NPHQD+QA RAHRIGQKN+V V +L+
Sbjct: 989 SPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQLMI 1048
Query: 999 VNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTIL-HQXXXXXXXXXXXX 1057
S EE+I+ R K+ +D +I D+ + + E L++IL H
Sbjct: 1049 RGSAEEKIMQIGRKKMVLDHVLI-----DRMAAEDDDGEDLESILRHGAKALFDDDNSGD 1103
Query: 1058 XXTVNQLIARTEDELTLFQKMDAERRKGETKPRLVEI-----KELPDWM--VKDDDEVEN 1110
++ + R D Q + + ++ ++ + L D + ++D + N
Sbjct: 1104 IIYTSESVDRLLDRSQAEQATNPDTNVSASEFSFAQVWAADSQGLEDQLNVAEEDPTISN 1163
Query: 1111 SMYXXXXXXXXXXA---------LMGRGSRQRKQVDYT 1139
+ A ++GRG R+R VDY+
Sbjct: 1164 QTWEKILQERERAAAEEARKKAEILGRGKRKRATVDYS 1201
Score = 484 (175.4 bits), Expect = 9.0e-41, Sum P(2) = 9.0e-41
Identities = 123/320 (38%), Positives = 183/320 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN EL+ LL F S K+ E+ + L++E I LH++
Sbjct: 770 TPLQNNTKELFNLLQFCDQS--KNAEELEEKYGT----------LSKEN----IPELHEL 813
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL--HNRGIL--LTDGSEKGKT 116
+RPF LRR K +V + LP V+ I+ MS LQK LY+ + N ++ + +E+ +
Sbjct: 814 IRPFFLRRTKAQVLTFLPPVVQIIVPVTMSVLQKKLYKSILAKNTQLIKAIFQRNEEDQP 873
Query: 117 GEGGARA-LKNTIVQLRKLCNHPFMFQN-IEEKYCQHIGQNNTVVSGPDIYRTSGKFELL 174
+ R L N ++QLRK HPF+F IEE+ ++ V+ ++ +GK +LL
Sbjct: 874 LKQTERHNLNNILMQLRKCLCHPFIFSKAIEER------TDDPEVAHRNLVDAAGKLQLL 927
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
+ +LPK + HRVL+F Q + + ++ED+ + RLDG S ++ ++ +N
Sbjct: 928 ELMLPKLQARGHRVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAE 987
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
S YF FLLSTR+GG+G+NL ADTVII D D+NPHQD+QA RAHRIGQKN+V V +L+
Sbjct: 988 NSPYFAFLLSTRSGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQLM 1047
Query: 295 TVNSVEERILAAARYKLNMD 314
S EE+I+ R K+ +D
Sbjct: 1048 IRGSAEEKIMQIGRKKMVLD 1067
Score = 50 (22.7 bits), Expect = 1.5e-67, Sum P(2) = 1.5e-67
Identities = 30/118 (25%), Positives = 51/118 (43%)
Query: 26 STFEQW--FNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLK-KEVESQLPEKVE 82
S E W F A +A +K ++ I + + L V + ++ K +E + ++ E
Sbjct: 550 SNTEAWNDFKAAYADWAKKPFISTPNQISLQKHLANVRK----QKFKSREAQPRIMTGGE 605
Query: 83 YIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFM 140
I+ GL L ++ + +L D GKT + L T+VQ K C PF+
Sbjct: 606 -IMDYQRDGLNWLYFKWFKQQNAILADEMGLGKTIQ--VIGLLATLVQDHK-C-WPFL 658
Score = 41 (19.5 bits), Expect = 9.0e-41, Sum P(2) = 9.0e-41
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 500 PSKAVGEKKTEDD-EYK-DAGEEATYYSI 526
P++A+ ++TE D E++ D A+ YS+
Sbjct: 1209 PARALASRETESDAEFREDEAGVASDYSM 1237
>ZFIN|ZDB-GENE-081104-186 [details] [associations]
symbol:si:ch211-227i14.2 "si:ch211-227i14.2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 ZFIN:ZDB-GENE-081104-186
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:AL929056
EMBL:CABZ01053382 EMBL:CABZ01053383 IPI:IPI00890401
Ensembl:ENSDART00000111655 Bgee:F1Q5V1 Uniprot:F1Q5V1
Length = 3108
Score = 567 (204.7 bits), Expect = 1.6e-67, Sum P(4) = 1.6e-67
Identities = 125/324 (38%), Positives = 196/324 (60%)
Query: 541 MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
+++G L+EYQ G+EW+ SL+ NLNGILADE GLGKTVQT+A +L + GP+LV
Sbjct: 1056 LLHGSLREYQQVGVEWLASLHRKNLNGILADETGLGKTVQTVAYFAHLACNQGIWGPHLV 1115
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRM-KNSKFNVLLTTYEFIIKDK 659
+V L NW +EF++W P ++ Y GS RR + R + + F+V +T+Y+ ++KD+
Sbjct: 1116 VVRTCKLLNWEMEFKRWCPGLKILLYLGSRRQRRYKRSRWCEPNNFHVCVTSYKLLLKDQ 1175
Query: 660 SVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNF 719
S + +WK +++DE +KN K +T+ S R+LL TPLQN L ELW +++F
Sbjct: 1176 SHFLRRRWKHLVLDEVQLIKNMTEKHWETIFNI-KSQQRILLINTPLQNTLKELWTMIHF 1234
Query: 720 LLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 779
LLP I + N P ++ N++ ++ RLH++++PF+LRR K++VE Q
Sbjct: 1235 LLPGIT------HPYLNFPIKPGTDQ---NQDYCHKLVIRLHRMIQPFILRRSKRDVEKQ 1285
Query: 780 LPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCN 839
+P+K E+I+KC +S QK +Y+ + ++ E KTG R L+ ++QL+K+CN
Sbjct: 1286 MPKKYEHILKCRLSKRQKSMYEDI----LIQPSAQEALKTGHF-VRVLE-VLMQLQKICN 1339
Query: 840 HPFMFQ--NIEEKY-CQHIGQNNT 860
HP + Q + Y CQ + Q NT
Sbjct: 1340 HPDLIQPRDTHNSYVCQPL-QYNT 1362
Score = 243 (90.6 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 59/160 (36%), Positives = 94/160 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW +++FLLP I + N P ++ N++ ++ RLH++
Sbjct: 1219 TPLQNTLKELWTMIHFLLPGIT------HPYLNFPIKPGTDQ---NQDYCHKLVIRLHRM 1269
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
++PF+LRR K++VE Q+P+K E+I+KC +S QK +Y+ + ++ E KTG
Sbjct: 1270 IQPFILRRSKRDVEKQMPKKYEHILKCRLSKRQKSMYEDI----LIQPSAQEALKTGHF- 1324
Query: 121 ARALKNTIVQLRKLCNHPFMFQ--NIEEKY-CQHIGQNNT 157
R L+ ++QL+K+CNHP + Q + Y CQ + Q NT
Sbjct: 1325 VRVLE-VLMQLQKICNHPDLIQPRDTHNSYVCQPL-QYNT 1362
Score = 232 (86.7 bits), Expect = 1.6e-67, Sum P(4) = 1.6e-67
Identities = 51/152 (33%), Positives = 88/152 (57%)
Query: 861 VVSGPDIYR----TSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYL 916
V S PD + ++GK E L +L K RVL+F QM ++ ILE + R +Y+
Sbjct: 1854 VASFPDAHMLEMDSAGKLEALSILLQKLSAENRRVLIFTQMASMLDILESFLDHRHLTYV 1913
Query: 917 RLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRA-GGLGLNLQAADTVIIFDSDWNPHQD 975
RLD + E+R E ++K+N + F +L+ R +G ++ ADT++ +D+D NP D
Sbjct: 1914 RLDESLSLEERQEQVKKYNR-NRQIFCTILTNRCCSAMG-HVFDADTIVFYDTDLNPSMD 1971
Query: 976 LQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
++ Q+ +IG+ ++ + RL + NS+EE++L
Sbjct: 1972 MRTQEWCDKIGRSKDIHIYRLESGNSIEEKLL 2003
Score = 232 (86.7 bits), Expect = 1.1e-32, Sum P(3) = 1.1e-32
Identities = 51/152 (33%), Positives = 88/152 (57%)
Query: 158 VVSGPDIYR----TSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYL 213
V S PD + ++GK E L +L K RVL+F QM ++ ILE + R +Y+
Sbjct: 1854 VASFPDAHMLEMDSAGKLEALSILLQKLSAENRRVLIFTQMASMLDILESFLDHRHLTYV 1913
Query: 214 RLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRA-GGLGLNLQAADTVIIFDSDWNPHQD 272
RLD + E+R E ++K+N + F +L+ R +G ++ ADT++ +D+D NP D
Sbjct: 1914 RLDESLSLEERQEQVKKYNR-NRQIFCTILTNRCCSAMG-HVFDADTIVFYDTDLNPSMD 1971
Query: 273 LQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 304
++ Q+ +IG+ ++ + RL + NS+EE++L
Sbjct: 1972 MRTQEWCDKIGRSKDIHIYRLESGNSIEEKLL 2003
Score = 46 (21.3 bits), Expect = 1.6e-67, Sum P(4) = 1.6e-67
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 244 STRAGG-LGLNLQAADTVIIFDSDWNPHQDLQAQ 276
+T GG L + +Q A V+ + NPH LQAQ
Sbjct: 590 ATVTGGQLQVKVQGAGAVL---APVNPHAQLQAQ 620
Score = 43 (20.2 bits), Expect = 1.6e-67, Sum P(4) = 1.6e-67
Identities = 10/40 (25%), Positives = 23/40 (57%)
Query: 1068 TEDELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDE 1107
+EDE + ++M+ +R E + + E + M+++D+E
Sbjct: 2148 SEDEQVVKERMETTKRGWELQLQQKLKVEKEEQMIQEDEE 2187
Score = 40 (19.1 bits), Expect = 3.3e-67, Sum P(4) = 3.3e-67
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 1088 KPRLVEIKELPDWMVKDD 1105
KP + ++ P+W++ +D
Sbjct: 2322 KPAMESGQDNPEWLISED 2339
Score = 38 (18.4 bits), Expect = 5.3e-67, Sum P(4) = 5.3e-67
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 1063 QLIARTEDELTLFQKMDAERRKG--ETKPRLVEIKELPDWMVKDDDEVENSMY 1113
Q+I E++L + + DA + E + EI +P W + +N +Y
Sbjct: 2180 QMIQEDEEDLLSYTREDAYNMEYVFENEDGQTEI--MPLWTPPTPPQDDNDIY 2230
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 476 (172.6 bits), Expect = 4.1e-67, Sum P(2) = 4.1e-67
Identities = 123/328 (37%), Positives = 177/328 (53%)
Query: 535 TEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKN 594
T AS + KL++YQI G+ W+ LY L GILADEMGLGKT QTIA + LM+K N
Sbjct: 376 TPPASFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMDKNIN 435
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSK--FNVLLTTY 652
GP+LVI P ST+ NW+ EF K+ P + Y GS + R ++ R+ ++K +NV+LTTY
Sbjct: 436 -GPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKDSYNVMLTTY 494
Query: 653 EFIIKDKS---VLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNK 709
K+ L ++ + DEGH +KN + + L + + RVLLTGTPLQN
Sbjct: 495 RLAATSKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSI-PADFRVLLTGTPLQNN 553
Query: 710 LPELWALLNFLLPSIF----KSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLR 765
L EL +LL F+LP +F KS +P + E+ L+E+ + R ++
Sbjct: 554 LKELISLLAFILPHVFDYGLKSLDVIFTMKKSP-ESDFERALLSEQR----VSRAKMMMA 608
Query: 766 PFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR---GILLTDGSEKGKTGEG 822
PF+LRR K +V LP+K I C+ S ++ Y ++ LL + K
Sbjct: 609 PFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTN 668
Query: 823 GARALKNT-----IVQLRKLCNHPFMFQ 845
A K + +VQLRKL +HP +F+
Sbjct: 669 ANLAKKKSTAGFVLVQLRKLADHPMLFR 696
Score = 291 (107.5 bits), Expect = 4.1e-67, Sum P(2) = 4.1e-67
Identities = 72/203 (35%), Positives = 115/203 (56%)
Query: 824 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDI---------YRTSGKF 874
A+A+ N Q +K N ++F++++ Y I +N P I + + K
Sbjct: 708 AKAIMNE-PQYKK-ANELYIFEDMQ--YMSDIELHNLCCKFPSINSFQLKDEPWMDATKV 763
Query: 875 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 934
L ++L E RV++F Q TQ++ IL+ + +LR DG+T+ + R +L+ +F
Sbjct: 764 RKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQF 823
Query: 935 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 994
ES +FLLST+AGG G+NL A+ VI++D +NP DLQA+DRAHR+GQK EV V
Sbjct: 824 YADES-INVFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVY 882
Query: 995 RLITVNSVEERILAAARYKLNMD 1017
+ + +++EE I A K+ +D
Sbjct: 883 KFVVKDTIEEHIQRLANAKIALD 905
Score = 291 (107.5 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 72/203 (35%), Positives = 115/203 (56%)
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDI---------YRTSGKF 171
A+A+ N Q +K N ++F++++ Y I +N P I + + K
Sbjct: 708 AKAIMNE-PQYKK-ANELYIFEDMQ--YMSDIELHNLCCKFPSINSFQLKDEPWMDATKV 763
Query: 172 ELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKF 231
L ++L E RV++F Q TQ++ IL+ + +LR DG+T+ + R +L+ +F
Sbjct: 764 RKLKKLLTNAVENGDRVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQF 823
Query: 232 NEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVL 291
ES +FLLST+AGG G+NL A+ VI++D +NP DLQA+DRAHR+GQK EV V
Sbjct: 824 YADES-INVFLLSTKAGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVY 882
Query: 292 RLITVNSVEERILAAARYKLNMD 314
+ + +++EE I A K+ +D
Sbjct: 883 KFVVKDTIEEHIQRLANAKIALD 905
Score = 152 (58.6 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 49/154 (31%), Positives = 74/154 (48%)
Query: 1 TPLQNKLPELWALLNFLLPSIF----KSCSTFEQWFNAPFATTGEKVELNEEETILIIRR 56
TPLQN L EL +LL F+LP +F KS +P + E+ L+E+ + R
Sbjct: 548 TPLQNNLKELISLLAFILPHVFDYGLKSLDVIFTMKKSP-ESDFERALLSEQR----VSR 602
Query: 57 LHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR---GILLTDGSEK 113
++ PF+LRR K +V LP+K I C+ S ++ Y ++ LL + K
Sbjct: 603 AKMMMAPFVLRRKKSQVLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMK 662
Query: 114 GKTGEGGARALKNT-----IVQLRKLCNHPFMFQ 142
A K + +VQLRKL +HP +F+
Sbjct: 663 TNLDTNANLAKKKSTAGFVLVQLRKLADHPMLFR 696
Score = 37 (18.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 5/10 (50%), Positives = 9/10 (90%)
Query: 649 LTTYEFIIKD 658
+T Y+F++KD
Sbjct: 879 VTVYKFVVKD 888
Score = 37 (18.1 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 546 LKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLME 590
+ +Q+K WM + L +L + + G V + T +++
Sbjct: 747 INSFQLKDEPWMDATKVRKLKKLLTNAVENGDRVVLFSQFTQVLD 791
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 453 (164.5 bits), Expect = 5.0e-67, Sum P(3) = 5.0e-67
Identities = 122/343 (35%), Positives = 184/343 (53%)
Query: 511 DDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGIL 569
DD+ + + SI++ Y+ ++Q S + +G LK YQI GL W+ +Y L+GIL
Sbjct: 381 DDKKMEQFLNTSTGSISYEYN---SQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGIL 437
Query: 570 ADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGS 629
ADEMGLGKT Q I+ L L EK +LV+VP STL NW+ EFEK+ PS V +Y G+
Sbjct: 438 ADEMGLGKTCQVISFLASLKEKGIQ-NRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGT 496
Query: 630 PLARRALQGRMKNSKFNVLLTTYEFII---KDKSVLSKIQWKCMIIDEGHRMKNHHCKLT 686
R + + ++ F+VL+TTY+ D+S L K ++ I DEGH +KN +
Sbjct: 497 QSERINKRYYLMDTDFDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERY 556
Query: 687 QTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIF-KSCSTFEQWFNAPFATTG-- 743
+ L ++ R+L+TGTPLQN L EL +LL F+LP +F + + + + G
Sbjct: 557 KHLMNI-PANFRLLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDI 615
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+ L++E I R ++ PF+LRR K+ V S LP K++++ C M Q LY +
Sbjct: 616 ERAYLSQER----ISRAKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSV 671
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQN 846
L+ E N ++QLRK H +F++
Sbjct: 672 LELKNLVNANRE-------------NILMQLRKAALHQLLFRS 701
Score = 319 (117.4 bits), Expect = 5.0e-67, Sum P(3) = 5.0e-67
Identities = 72/170 (42%), Positives = 102/170 (60%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
S K + L +L K + + R+L+F Q TQ++ ILE D +LRLDG+T E R +L
Sbjct: 764 SAKVKKLCSLLKKSRPNE-RILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQL 822
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ F+ E+ Y +FLLST++GG G+NL A+ VI+FD +NP D+QA+DRAHR+GQ
Sbjct: 823 IDDFHTNEN-YKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRP 881
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQ 1040
V V RLIT N++EE I A KL ++ + QK E + LQ
Sbjct: 882 VHVYRLITKNTIEENIRRLANTKLTLESSLTTDSEKIQKEISGELMKSLQ 931
Score = 314 (115.6 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 71/166 (42%), Positives = 103/166 (62%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
S K + L +L K + + R+L+F Q TQ++ ILE D +LRLDG+T E R +L
Sbjct: 764 SAKVKKLCSLLKKSRPNE-RILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQL 822
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ F+ E+ Y +FLLST++GG G+NL A+ VI+FD +NP D+QA+DRAHR+GQ
Sbjct: 823 IDDFHTNEN-YKVFLLSTKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRP 881
Query: 288 VRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAI 333
V V RLIT N++EE I A KL ++ + T ++K+ K I
Sbjct: 882 VHVYRLITKNTIEENIRRLANTKLTLES-----SLTTDSEKIQKEI 922
Score = 144 (55.7 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 45/146 (30%), Positives = 70/146 (47%)
Query: 1 TPLQNKLPELWALLNFLLPSIF-KSCSTFEQWFNAPFATTG--EKVELNEEETILIIRRL 57
TPLQN L EL +LL F+LP +F + + + + G E+ L++E I R
Sbjct: 573 TPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLSQER----ISRA 628
Query: 58 HKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTG 117
++ PF+LRR K+ V S LP K++++ C M Q LY + L+ E
Sbjct: 629 KTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNLVNANRE----- 683
Query: 118 EGGARALKNTIVQLRKLCNHPFMFQN 143
N ++QLRK H +F++
Sbjct: 684 --------NILMQLRKAALHQLLFRS 701
Score = 43 (20.2 bits), Expect = 5.0e-67, Sum P(3) = 5.0e-67
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 266 DWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILA 305
D P +D+ ++ +++I N ++ +N+V++R A
Sbjct: 95 DQPPERDVSLKESSNKINPSNFFDSEQITKINAVKKRFPA 134
Score = 37 (18.1 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 83
E+ +L+ ++L ++ L R +L +L+K QL + +Y
Sbjct: 661 EETQLSLYLSVLELKNLVNANRENILMQLRKAALHQLLFRSQY 703
Score = 37 (18.1 bits), Expect = 1.0e-22, Sum P(3) = 1.0e-22
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY 786
E+ +L+ ++L ++ L R +L +L+K QL + +Y
Sbjct: 661 EETQLSLYLSVLELKNLVNANRENILMQLRKAALHQLLFRSQY 703
>UNIPROTKB|E1BYA8 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
Length = 1498
Score = 720 (258.5 bits), Expect = 8.4e-67, Sum P(2) = 8.4e-67
Identities = 171/497 (34%), Positives = 270/497 (54%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKK----------KN 594
KL +YQ G+ W+ L+ GIL DEMGLGKT+Q IA L L K +
Sbjct: 501 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRYQG 560
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANV-VAYK-GSPLARRALQGRMKNSKFNVLLTTY 652
LGP +++ P + + WV EF W P V + ++ GS ++ R S +L+T+Y
Sbjct: 561 LGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIREIASCHGILITSY 620
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
+I + + W +I+DEGH+++N + +T F + HR++L+G+P+QN L E
Sbjct: 621 SYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQF-RTPHRIILSGSPMQNNLKE 679
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFL 768
LW+L +F+ P + F + F+ P G V++ + L + P+L
Sbjct: 680 LWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDAINPYL 737
Query: 769 LRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
LRR+K +V+ L P+K E ++ C ++ Q+ +YQ+ D E + G +
Sbjct: 738 LRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNF-------IDSKEVYQILNGDMQV 790
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-RTSGKFELLDRILPKFK 885
+V LRK+CNHP +F K + + + + Y + SGK +++ +L +
Sbjct: 791 FSG-LVALRKICNHPDLFSG-GPKILKCVPDADLEEADQFGYWKRSGKMIVVESLLKIWH 848
Query: 886 ETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFL 945
+ HRVL F Q Q++ ILE + R++SYLR+DGTT R L+ ++NE +S FIFL
Sbjct: 849 KQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLITRYNEDKS-IFIFL 907
Query: 946 LSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEER 1005
L+TR GG+G+NL AD VII+D DWNP D QA++RA RIGQK +V V RL+T ++EE+
Sbjct: 908 LTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEK 967
Query: 1006 ILAAARYKLNMDEKVIQ 1022
I +K + +V++
Sbjct: 968 IYHRQIFKQFLTNRVLK 984
Score = 480 (174.0 bits), Expect = 7.5e-40, Sum P(2) = 7.5e-40
Identities = 113/310 (36%), Positives = 174/310 (56%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRR 56
+P+QN L ELW+L +F+ P + F + F+ P G V++ +
Sbjct: 671 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV-- 728
Query: 57 LHKVLRPFLLRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 114
L + P+LLRR+K +V+ L P+K E ++ C ++ Q+ +YQ+ D E
Sbjct: 729 LRDAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNF-------IDSKEVY 781
Query: 115 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIY-RTSGKFEL 173
+ G + +V LRK+CNHP +F K + + + + Y + SGK +
Sbjct: 782 QILNGDMQVFSG-LVALRKICNHPDLFSG-GPKILKCVPDADLEEADQFGYWKRSGKMIV 839
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
++ +L + + HRVL F Q Q++ ILE + R++SYLR+DGTT R L+ ++NE
Sbjct: 840 VESLLKIWHKQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLITRYNE 899
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
+S FIFLL+TR GG+G+NL AD VII+D DWNP D QA++RA RIGQK +V V RL
Sbjct: 900 DKS-IFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRL 958
Query: 294 ITVNSVEERI 303
+T ++EE+I
Sbjct: 959 LTAGTIEEKI 968
Score = 37 (18.1 bits), Expect = 8.4e-67, Sum P(2) = 8.4e-67
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 1125 LMGRGSRQRKQVDYTD 1140
L G Q KQVD T+
Sbjct: 1160 LCGAAGSQEKQVDKTE 1175
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 683 (245.5 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 145/343 (42%), Positives = 210/343 (61%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E++ + T E E S + GKL++YQ++GL W++SLY N +N
Sbjct: 129 RRTEQEEDEELLTESSKTTNVCTRFE---ESPSYVKWGKLRDYQVRGLNWLISLYENGIN 185
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF++W P+ V
Sbjct: 186 GILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCL 245
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G R A ++ + +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 246 IGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKL 305
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F +++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ +K
Sbjct: 306 SEIVREF-KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQK 364
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 365 ----------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR--- 411
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 412 --ILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAE 452
Score = 267 (99.0 bits), Expect = 8.5e-20, P = 8.5e-20
Identities = 62/145 (42%), Positives = 79/145 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ +K ++ RLH V
Sbjct: 323 TPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQK----------LVERLHMV 372
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 373 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKLD 427
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 428 KMRLLNILMQLRKCCNHPYLFDGAE 452
>UNIPROTKB|E1C188 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AADN02034826 IPI:IPI00592312
Ensembl:ENSGALT00000003680 ArrayExpress:E1C188 Uniprot:E1C188
Length = 3044
Score = 528 (190.9 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 112/302 (37%), Positives = 178/302 (58%)
Query: 541 MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
++ G L+EYQ GL+W+ LY NLNGILADE GLGKTVQ IA +L + N GP+LV
Sbjct: 1086 LLYGPLREYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLV 1145
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDK 659
+V + W LE ++W P ++ Y GS RA + + FNV +T+Y+ + K
Sbjct: 1146 VVRSCNILKWELELKRWCPGLKILLYFGSQRELRAKRQEWSEPNSFNVCITSYKQLFKGH 1205
Query: 660 SVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNF 719
K++WK +I+DE ++KN K + L + S HR+LL TPL N L ELW +++F
Sbjct: 1206 PAFMKMRWKYLIVDEMQQIKNMTEKHWEALFSL-RSQHRLLLIDTPLHNTLMELWTMVHF 1264
Query: 720 LLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 779
L+P I + F P E+ N++ ++ RLH++++PF+LRR K++VE Q
Sbjct: 1265 LIPGISRPYLDF------PVKAPNEE---NQDYCHKLVIRLHRMIQPFILRRSKRDVEKQ 1315
Query: 780 LPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCN 839
L +K E+++KC +S QK +Y+ ++L G+++ G ++ + ++QL+++CN
Sbjct: 1316 LTKKYEHVLKCRLSSRQKAMYED-----VILQPGTQEALKS-GHFISVLHVLMQLQRICN 1369
Query: 840 HP 841
HP
Sbjct: 1370 HP 1371
Score = 246 (91.7 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 57/170 (33%), Positives = 96/170 (56%)
Query: 846 NIEEKYCQHIGQNNTVVSG-----PD---IYRTSGKFELLDRILPKFKETKHRVLMFCQM 897
++++K H+ Q + + PD + SGK E L +L K K RVL+ QM
Sbjct: 1788 SLKQKAAPHLHQLRRITTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQM 1847
Query: 898 TQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNL 957
++ ILE + + +++R+D E R EL++ FN + + F +LS+ + G+NL
Sbjct: 1848 ILMLDILELFLNFHFLTFVRIDEYANHEQRQELMKSFNR-DKRIFCAILSSHSRSTGVNL 1906
Query: 958 QAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
ADTV+ +D+D NP D +AQ+ RIG+ ++ + RL++ NSVEE++L
Sbjct: 1907 VEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLL 1956
Score = 246 (91.7 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 57/170 (33%), Positives = 96/170 (56%)
Query: 143 NIEEKYCQHIGQNNTVVSG-----PD---IYRTSGKFELLDRILPKFKETKHRVLMFCQM 194
++++K H+ Q + + PD + SGK E L +L K K RVL+ QM
Sbjct: 1788 SLKQKAAPHLHQLRRITTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQM 1847
Query: 195 TQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNL 254
++ ILE + + +++R+D E R EL++ FN + + F +LS+ + G+NL
Sbjct: 1848 ILMLDILELFLNFHFLTFVRIDEYANHEQRQELMKSFNR-DKRIFCAILSSHSRSTGVNL 1906
Query: 255 QAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 304
ADTV+ +D+D NP D +AQ+ RIG+ ++ + RL++ NSVEE++L
Sbjct: 1907 VEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLL 1956
Score = 215 (80.7 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 46/138 (33%), Positives = 83/138 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPL N L ELW +++FL+P I + F P E+ N++ ++ RLH++
Sbjct: 1249 TPLHNTLMELWTMVHFLIPGISRPYLDF------PVKAPNEE---NQDYCHKLVIRLHRM 1299
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
++PF+LRR K++VE QL +K E+++KC +S QK +Y+ ++L G+++ G
Sbjct: 1300 IQPFILRRSKRDVEKQLTKKYEHVLKCRLSSRQKAMYED-----VILQPGTQEALKS-GH 1353
Query: 121 ARALKNTIVQLRKLCNHP 138
++ + ++QL+++CNHP
Sbjct: 1354 FISVLHVLMQLQRICNHP 1371
Score = 39 (18.8 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 738 PFATTGEKVELNEEETILIIRRLHKV 763
P T G+ E EE+ L+ RL ++
Sbjct: 1650 PAPTHGQSQETYEEKNRLLKERLDRI 1675
Score = 39 (18.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 35 PFATTGEKVELNEEETILIIRRLHKV 60
P T G+ E EE+ L+ RL ++
Sbjct: 1650 PAPTHGQSQETYEEKNRLLKERLDRI 1675
>UNIPROTKB|E1C186 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:AADN02034826
IPI:IPI00587546 Ensembl:ENSGALT00000003682 ArrayExpress:E1C186
Uniprot:E1C186
Length = 3118
Score = 528 (190.9 bits), Expect = 3.9e-66, Sum P(2) = 3.9e-66
Identities = 112/302 (37%), Positives = 178/302 (58%)
Query: 541 MVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLV 600
++ G L+EYQ GL+W+ LY NLNGILADE GLGKTVQ IA +L + N GP+LV
Sbjct: 1086 LLYGPLREYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLV 1145
Query: 601 IVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDK 659
+V + W LE ++W P ++ Y GS RA + + FNV +T+Y+ + K
Sbjct: 1146 VVRSCNILKWELELKRWCPGLKILLYFGSQRELRAKRQEWSEPNSFNVCITSYKQLFKGH 1205
Query: 660 SVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNF 719
K++WK +I+DE ++KN K + L + S HR+LL TPL N L ELW +++F
Sbjct: 1206 PAFMKMRWKYLIVDEMQQIKNMTEKHWEALFSL-RSQHRLLLIDTPLHNTLMELWTMVHF 1264
Query: 720 LLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQ 779
L+P I + F P E+ N++ ++ RLH++++PF+LRR K++VE Q
Sbjct: 1265 LIPGISRPYLDF------PVKAPNEE---NQDYCHKLVIRLHRMIQPFILRRSKRDVEKQ 1315
Query: 780 LPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCN 839
L +K E+++KC +S QK +Y+ ++L G+++ G ++ + ++QL+++CN
Sbjct: 1316 LTKKYEHVLKCRLSSRQKAMYED-----VILQPGTQEALKS-GHFISVLHVLMQLQRICN 1369
Query: 840 HP 841
HP
Sbjct: 1370 HP 1371
Score = 246 (91.7 bits), Expect = 3.9e-66, Sum P(2) = 3.9e-66
Identities = 57/170 (33%), Positives = 96/170 (56%)
Query: 846 NIEEKYCQHIGQNNTVVSG-----PD---IYRTSGKFELLDRILPKFKETKHRVLMFCQM 897
++++K H+ Q + + PD + SGK E L +L K K RVL+ QM
Sbjct: 1867 SLKQKAAPHLHQLRRITTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQM 1926
Query: 898 TQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNL 957
++ ILE + + +++R+D E R EL++ FN + + F +LS+ + G+NL
Sbjct: 1927 ILMLDILELFLNFHFLTFVRIDEYANHEQRQELMKSFNR-DKRIFCAILSSHSRSTGVNL 1985
Query: 958 QAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 1007
ADTV+ +D+D NP D +AQ+ RIG+ ++ + RL++ NSVEE++L
Sbjct: 1986 VEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLL 2035
Score = 246 (91.7 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 57/170 (33%), Positives = 96/170 (56%)
Query: 143 NIEEKYCQHIGQNNTVVSG-----PD---IYRTSGKFELLDRILPKFKETKHRVLMFCQM 194
++++K H+ Q + + PD + SGK E L +L K K RVL+ QM
Sbjct: 1867 SLKQKAAPHLHQLRRITTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQM 1926
Query: 195 TQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNL 254
++ ILE + + +++R+D E R EL++ FN + + F +LS+ + G+NL
Sbjct: 1927 ILMLDILELFLNFHFLTFVRIDEYANHEQRQELMKSFNR-DKRIFCAILSSHSRSTGVNL 1985
Query: 255 QAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERIL 304
ADTV+ +D+D NP D +AQ+ RIG+ ++ + RL++ NSVEE++L
Sbjct: 1986 VEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSVEEKLL 2035
Score = 215 (80.7 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 46/138 (33%), Positives = 83/138 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPL N L ELW +++FL+P I + F P E+ N++ ++ RLH++
Sbjct: 1249 TPLHNTLMELWTMVHFLIPGISRPYLDF------PVKAPNEE---NQDYCHKLVIRLHRM 1299
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
++PF+LRR K++VE QL +K E+++KC +S QK +Y+ ++L G+++ G
Sbjct: 1300 IQPFILRRSKRDVEKQLTKKYEHVLKCRLSSRQKAMYED-----VILQPGTQEALKS-GH 1353
Query: 121 ARALKNTIVQLRKLCNHP 138
++ + ++QL+++CNHP
Sbjct: 1354 FISVLHVLMQLQRICNHP 1371
Score = 40 (19.1 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 269 PHQDLQAQDRAHRIGQKNEVRVLRLI-TVNSVEERILAAARYKLNMDEKEYHRNNTART 326
P +Q + Q+ +VR I TV+S + + +AAA+++ R+ A T
Sbjct: 1481 PSTQVQRTVTTATVTQQGQVRGRSPIATVSSNQGKRIAAAQFQTTQASTSAPRHQPAAT 1539
Score = 39 (18.8 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 738 PFATTGEKVELNEEETILIIRRLHKV 763
P T G+ E EE+ L+ RL ++
Sbjct: 1729 PAPTHGQSQETYEEKNRLLKERLDRI 1754
Score = 39 (18.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 35 PFATTGEKVELNEEETILIIRRLHKV 60
P T G+ E EE+ L+ RL ++
Sbjct: 1729 PAPTHGQSQETYEEKNRLLKERLDRI 1754
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 683 (245.5 bits), Expect = 4.0e-66, Sum P(3) = 4.0e-66
Identities = 145/343 (42%), Positives = 210/343 (61%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
++TE +E ++ E++ + T E E S + GKL++YQ++GL W++SLY N +N
Sbjct: 129 RRTEQEEDEELLTESSKTTNVCTRFE---ESPSYVKWGKLRDYQVRGLNWLISLYENGIN 185
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF++W P+ V
Sbjct: 186 GILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCL 245
Query: 627 KGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G R A ++ + +++V +T+YE +IK+KSV K W+ ++IDE HR+KN KL
Sbjct: 246 IGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKL 305
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++ + F +++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+ +K
Sbjct: 306 SEIVREF-KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQK 364
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 365 ----------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR--- 411
Query: 806 RGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 412 --ILMKDIDILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAE 452
Score = 630 (226.8 bits), Expect = 6.3e-58, Sum P(2) = 6.3e-58
Identities = 138/290 (47%), Positives = 177/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 365 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 419
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 420 LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 471
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R + +N
Sbjct: 472 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYN 531
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 532 EPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 591
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
IT N+VEERI+ A KL +D VIQ G + DQ + E LQ I H
Sbjct: 592 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRH 641
Score = 600 (216.3 bits), Expect = 8.3e-56, Sum P(3) = 8.3e-56
Identities = 131/279 (46%), Positives = 169/279 (60%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 365 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 419
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 420 LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 471
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R + +N
Sbjct: 472 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYN 531
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 532 EPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 591
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
IT N+VEERI+ A KL +D + Q LNK
Sbjct: 592 FITDNTVEERIVERAEMKLRLDSIVIQQGRLV-DQNLNK 629
Score = 267 (99.0 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 62/145 (42%), Positives = 79/145 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ +K ++ RLH V
Sbjct: 323 TPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQK----------LVERLHMV 372
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 373 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKLD 427
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 428 KMRLLNILMQLRKCCNHPYLFDGAE 452
Score = 55 (24.4 bits), Expect = 4.0e-66, Sum P(3) = 4.0e-66
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I RYK + I G
Sbjct: 873 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAPFHQLRISYGTNKG 929
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 930 KNYTEEEDRFLICMLHK 946
Score = 42 (19.8 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 769 LRRLKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ + +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 850 IENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQ 888
Score = 41 (19.5 bits), Expect = 4.0e-66, Sum P(3) = 4.0e-66
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 1062 NQLIARTEDE-LTLFQKMDAERRKGETKPRLVEIKEL 1097
N LI E E + L +K AE++K KP + +++
Sbjct: 987 NTLITLIERENMELEEKEKAEKKKRGPKPSSAQKRKM 1023
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 686 (246.5 bits), Expect = 4.9e-66, Sum P(2) = 4.9e-66
Identities = 145/347 (41%), Positives = 209/347 (60%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+VG+ + E ++ E T S A + + S + GKL++YQ++GL W++SLY
Sbjct: 136 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYE 195
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N +NGILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF+KW P+
Sbjct: 196 NGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLR 255
Query: 623 VVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V G R A ++ + +++V +T+YE +IK+KSV K W+ ++IDE HR+KN
Sbjct: 256 SVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNE 315
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
KL++ + F +++R+LLTGTPLQN L ELW+LLNFLLP +F S F+ WF+
Sbjct: 316 KSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCL 374
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
+K ++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 375 GDQK----------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYT 424
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 425 R-----ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 466
Score = 635 (228.6 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 138/290 (47%), Positives = 178/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 379 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 433
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 434 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 485
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R + + +N
Sbjct: 486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 605
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
IT N+VEERI+ A KL +D VIQ G + DQ + E LQ I H
Sbjct: 606 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRH 655
Score = 605 (218.0 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 131/279 (46%), Positives = 170/279 (60%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 379 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 433
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 434 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 485
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R + + +N
Sbjct: 486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 605
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
IT N+VEERI+ A KL +D + Q LNK
Sbjct: 606 FITDNTVEERIVERAEMKLRLDSIVIQQGRLV-DQNLNK 643
Score = 266 (98.7 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 61/145 (42%), Positives = 79/145 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFLLP +F S F+ WF+ +K ++ RLH V
Sbjct: 337 TPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQK----------LVERLHMV 386
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 387 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKMD 441
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 442 KMRLLNILMQLRKCCNHPYLFDGAE 466
Score = 55 (24.4 bits), Expect = 4.9e-66, Sum P(2) = 4.9e-66
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I RYK + I G
Sbjct: 887 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAPFHQLRISYGTNKG 943
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 944 KNYTEEEDRFLICMLHK 960
Score = 42 (19.8 bits), Expect = 4.3e-55, Sum P(2) = 4.3e-55
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 769 LRRLKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ + +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 864 IENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQ 902
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 698 (250.8 bits), Expect = 5.4e-66, P = 5.4e-66
Identities = 145/318 (45%), Positives = 203/318 (63%)
Query: 532 EKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEK 591
E V ++ + G +++YQI GL W++SL+ N ++GILADEMGLGKT+QTI+ L YL
Sbjct: 172 ETVFRESPAFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHI 231
Query: 592 KKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQG-RMKNSKFNVLLT 650
GP+LVIVP STL NW EF KW P NV+ +G+ R AL R+ + F+V +T
Sbjct: 232 MGITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAALIAERLVDESFDVCIT 291
Query: 651 TYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKL 710
+YE I+++KS L K W+ +IIDE HR+KN L Q + F NS +R+L+TGTPLQN +
Sbjct: 292 SYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLF-NSRNRLLITGTPLQNNI 350
Query: 711 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLR 770
ELWALLNFLLP +F F+QWF+ GE + +T+ +++LH+VLRPFLLR
Sbjct: 351 HELWALLNFLLPDVFGDSEAFDQWFS------GEG---QDSDTV--VQQLHRVLRPFLLR 399
Query: 771 RLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNT 830
R+K +VE L K E + M+ +Q+ YQ + + I +G+ GK E R L N
Sbjct: 400 RVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGAN-GKR-ESKTRLL-NI 456
Query: 831 IVQLRKLCNHPFMFQNIE 848
++QLRK CNHP++F+ E
Sbjct: 457 VMQLRKCCNHPYLFEGAE 474
Score = 587 (211.7 bits), Expect = 1.3e-53, P = 1.3e-53
Identities = 126/295 (42%), Positives = 185/295 (62%)
Query: 751 EETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILL 810
+++ ++++LH+VLRPFLLRR+K +VE L K E + M+ +Q+ YQ + + I
Sbjct: 380 QDSDTVVQQLHRVLRPFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDA 439
Query: 811 TDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRT 870
+G+ GK E R L N ++QLRK CNHP++F+ E G T + +
Sbjct: 440 VNGAN-GKR-ESKTRLL-NIVMQLRKCCNHPYLFEGAEP------GPPYT--TDEHLVYN 488
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK +LD++L + K RVL+F QM++++ ILEDY ++R++ Y R+DG T EDR
Sbjct: 489 SGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTAHEDRIAA 548
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+ ++N+P S+ F+FLL+TRAGGLG+NL AD VI+FDSDWNP DLQA DRAHRIGQ +
Sbjct: 549 IDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQ 608
Query: 991 VRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKS-TGSERHEFLQTILH 1044
V V R + N++EE++L A KL++D VIQ G + + + E L I H
Sbjct: 609 VYVYRFLVDNTIEEKVLERAAQKLHLDRLVIQQGRAQVAAKAAANKDELLSMIQH 663
Score = 566 (204.3 bits), Expect = 2.5e-50, Sum P(2) = 2.5e-50
Identities = 123/288 (42%), Positives = 180/288 (62%)
Query: 48 EETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILL 107
+++ ++++LH+VLRPFLLRR+K +VE L K E + M+ +Q+ YQ + + I
Sbjct: 380 QDSDTVVQQLHRVLRPFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDA 439
Query: 108 TDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRT 167
+G+ GK E R L N ++QLRK CNHP++F+ E G T + +
Sbjct: 440 VNGAN-GKR-ESKTRLL-NIVMQLRKCCNHPYLFEGAEP------GPPYT--TDEHLVYN 488
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK +LD++L + K RVL+F QM++++ ILEDY ++R++ Y R+DG T EDR
Sbjct: 489 SGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTAHEDRIAA 548
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+ ++N+P S+ F+FLL+TRAGGLG+NL AD VI+FDSDWNP DLQA DRAHRIGQ +
Sbjct: 549 IDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQ 608
Query: 288 VRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKAIIN 335
V V R + N++EE++L A KL++D + R Q KA N
Sbjct: 609 VYVYRFLVDNTIEEKVLERAAQKLHLDRLVIQQG---RAQVAAKAAAN 653
Score = 278 (102.9 bits), Expect = 6.6e-18, Sum P(3) = 6.6e-18
Identities = 63/145 (43%), Positives = 89/145 (61%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN + ELWALLNFLLP +F F+QWF+ GE + +T+ +++LH+V
Sbjct: 344 TPLQNNIHELWALLNFLLPDVFGDSEAFDQWFS------GEG---QDSDTV--VQQLHRV 392
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE L K E + M+ +Q+ YQ + + I +G+ GK E
Sbjct: 393 LRPFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGAN-GKR-ESK 450
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
R L N ++QLRK CNHP++F+ E
Sbjct: 451 TRLL-NIVMQLRKCCNHPYLFEGAE 474
Score = 41 (19.5 bits), Expect = 2.5e-50, Sum P(2) = 2.5e-50
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 736 NAPFATTGEKVELNEEETILIIR 758
N +TT +KV EE+ L+++
Sbjct: 961 NYSVSTTNKKVYTEEEDRFLLVQ 983
Score = 39 (18.8 bits), Expect = 6.6e-18, Sum P(3) = 6.6e-18
Identities = 12/58 (20%), Positives = 25/58 (43%)
Query: 265 SDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAAR--YKLNMDEKEYHR 320
S+WN Q + H+ G +N+ + V I A ++ ++ + +YH+
Sbjct: 866 SEWNRRDFQQFVNGCHKFG-RNDFEGIATEVVGKTAAEIKAYSKVFWQRYTEIADYHK 922
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 683 (245.5 bits), Expect = 1.1e-65, Sum P(2) = 1.1e-65
Identities = 144/347 (41%), Positives = 209/347 (60%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+VG+ + E ++ E T S A + + S + GKL++YQ++GL W++SLY
Sbjct: 136 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYE 195
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N +NGILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF++W P+
Sbjct: 196 NGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLR 255
Query: 623 VVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V G R A ++ + +++V +T+YE +IK+KSV K W+ ++IDE HR+KN
Sbjct: 256 SVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNE 315
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
KL++ + F +++R+LLTGTPLQN L ELW+LLNFLLP +F S F+ WF+
Sbjct: 316 KSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCL 374
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
+K ++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 375 GDQK----------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYT 424
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 425 R-----ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 466
Score = 635 (228.6 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 138/290 (47%), Positives = 178/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 379 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 433
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 434 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 485
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R + + +N
Sbjct: 486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 605
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
IT N+VEERI+ A KL +D VIQ G + DQ + E LQ I H
Sbjct: 606 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRH 655
Score = 605 (218.0 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 131/279 (46%), Positives = 170/279 (60%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 379 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 433
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 434 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 485
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R + + +N
Sbjct: 486 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 545
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 546 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 605
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
IT N+VEERI+ A KL +D + Q LNK
Sbjct: 606 FITDNTVEERIVERAEMKLRLDSIVIQQGRLV-DQNLNK 643
Score = 266 (98.7 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 61/145 (42%), Positives = 79/145 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFLLP +F S F+ WF+ +K ++ RLH V
Sbjct: 337 TPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQK----------LVERLHMV 386
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 387 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKMD 441
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 442 KMRLLNILMQLRKCCNHPYLFDGAE 466
Score = 55 (24.4 bits), Expect = 1.1e-65, Sum P(2) = 1.1e-65
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I RYK + I G
Sbjct: 887 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAPFHQLRISYGTNKG 943
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 944 KNYTEEEDRFLICMLHK 960
Score = 42 (19.8 bits), Expect = 4.3e-55, Sum P(2) = 4.3e-55
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 769 LRRLKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ + +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 864 IENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQ 902
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 683 (245.5 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 144/347 (41%), Positives = 209/347 (60%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+VG+ + E ++ E T S A + + S + GKL++YQ++GL W++SLY
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYE 196
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N +NGILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF++W P+
Sbjct: 197 NGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLR 256
Query: 623 VVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V G R A ++ + +++V +T+YE +IK+KSV K W+ ++IDE HR+KN
Sbjct: 257 SVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNE 316
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
KL++ + F +++R+LLTGTPLQN L ELW+LLNFLLP +F S F+ WF+
Sbjct: 317 KSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCL 375
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
+K ++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 376 GDQK----------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYT 425
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 426 R-----ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 467
Score = 638 (229.6 bits), Expect = 2.1e-59, P = 2.1e-59
Identities = 139/290 (47%), Positives = 178/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 434
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 486
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R E + +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
IT N+VEERI+ A KL +D VIQ G + DQ + E LQ I H
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRH 656
Score = 608 (219.1 bits), Expect = 8.5e-57, Sum P(2) = 8.5e-57
Identities = 132/279 (47%), Positives = 170/279 (60%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 434
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 486
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R E + +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
IT N+VEERI+ A KL +D + Q LNK
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLV-DQNLNK 644
Score = 266 (98.7 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 61/145 (42%), Positives = 79/145 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFLLP +F S F+ WF+ +K ++ RLH V
Sbjct: 338 TPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQK----------LVERLHMV 387
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 388 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKMD 442
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 443 KMRLLNILMQLRKCCNHPYLFDGAE 467
Score = 55 (24.4 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I RYK + I G
Sbjct: 888 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAPFHQLRISYGTNKG 944
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 945 KNYTEEEDRFLICMLHK 961
Score = 42 (19.8 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 769 LRRLKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ + +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 865 IENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQ 903
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 683 (245.5 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 144/347 (41%), Positives = 209/347 (60%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+VG+ + E ++ E T S A + + S + GKL++YQ++GL W++SLY
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYE 196
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N +NGILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF++W P+
Sbjct: 197 NGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLR 256
Query: 623 VVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V G R A ++ + +++V +T+YE +IK+KSV K W+ ++IDE HR+KN
Sbjct: 257 SVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNE 316
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
KL++ + F +++R+LLTGTPLQN L ELW+LLNFLLP +F S F+ WF+
Sbjct: 317 KSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCL 375
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
+K ++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 376 GDQK----------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYT 425
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 426 R-----ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 467
Score = 638 (229.6 bits), Expect = 2.1e-59, P = 2.1e-59
Identities = 139/290 (47%), Positives = 178/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 434
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 486
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R E + +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
IT N+VEERI+ A KL +D VIQ G + DQ + E LQ I H
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRH 656
Score = 608 (219.1 bits), Expect = 8.5e-57, Sum P(2) = 8.5e-57
Identities = 132/279 (47%), Positives = 170/279 (60%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 434
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 486
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R E + +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
IT N+VEERI+ A KL +D + Q LNK
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLV-DQNLNK 644
Score = 266 (98.7 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 61/145 (42%), Positives = 79/145 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFLLP +F S F+ WF+ +K ++ RLH V
Sbjct: 338 TPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQK----------LVERLHMV 387
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 388 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKMD 442
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 443 KMRLLNILMQLRKCCNHPYLFDGAE 467
Score = 55 (24.4 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I RYK + I G
Sbjct: 888 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAPFHQLRISYGTNKG 944
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 945 KNYTEEEDRFLICMLHK 961
Score = 42 (19.8 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 769 LRRLKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ + +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 865 IENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQ 903
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 683 (245.5 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 144/347 (41%), Positives = 209/347 (60%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+VG+ + E ++ E T S A + + S + GKL++YQ++GL W++SLY
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYE 196
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N +NGILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF++W P+
Sbjct: 197 NGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLR 256
Query: 623 VVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V G R A ++ + +++V +T+YE +IK+KSV K W+ ++IDE HR+KN
Sbjct: 257 SVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNE 316
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
KL++ + F +++R+LLTGTPLQN L ELW+LLNFLLP +F S F+ WF+
Sbjct: 317 KSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCL 375
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
+K ++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 376 GDQK----------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYT 425
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 426 R-----ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 467
Score = 638 (229.6 bits), Expect = 2.1e-59, P = 2.1e-59
Identities = 139/290 (47%), Positives = 178/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 434
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 486
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R E + +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
IT N+VEERI+ A KL +D VIQ G + DQ + E LQ I H
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRH 656
Score = 608 (219.1 bits), Expect = 8.5e-57, Sum P(2) = 8.5e-57
Identities = 132/279 (47%), Positives = 170/279 (60%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 434
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 486
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R E + +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYN 546
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
IT N+VEERI+ A KL +D + Q LNK
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLV-DQNLNK 644
Score = 266 (98.7 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 61/145 (42%), Positives = 79/145 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFLLP +F S F+ WF+ +K ++ RLH V
Sbjct: 338 TPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQK----------LVERLHMV 387
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 388 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKMD 442
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 443 KMRLLNILMQLRKCCNHPYLFDGAE 467
Score = 55 (24.4 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I RYK + I G
Sbjct: 888 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAPFHQLRISYGTNKG 944
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 945 KNYTEEEDRFLICMLHK 961
Score = 42 (19.8 bits), Expect = 2.0e-55, Sum P(2) = 2.0e-55
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 769 LRRLKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ + +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 865 IENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQ 903
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 683 (245.5 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 144/347 (41%), Positives = 209/347 (60%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+VG+ + E ++ E T S A + + S + GKL++YQ++GL W++SLY
Sbjct: 137 SVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYE 196
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N +NGILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF++W P+
Sbjct: 197 NGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLR 256
Query: 623 VVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V G R A ++ + +++V +T+YE +IK+KSV K W+ ++IDE HR+KN
Sbjct: 257 SVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNE 316
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
KL++ + F +++R+LLTGTPLQN L ELW+LLNFLLP +F S F+ WF+
Sbjct: 317 KSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCL 375
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
+K ++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y
Sbjct: 376 GDQK----------LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYT 425
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 426 R-----ILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAE 467
Score = 635 (228.6 bits), Expect = 4.6e-59, P = 4.6e-59
Identities = 138/290 (47%), Positives = 178/290 (61%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 434
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 486
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R + + +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 546
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
IT N+VEERI+ A KL +D VIQ G + DQ + E LQ I H
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRH 656
Score = 605 (218.0 bits), Expect = 1.9e-56, Sum P(2) = 1.9e-56
Identities = 131/279 (46%), Positives = 170/279 (60%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D
Sbjct: 380 LVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDI 434
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 435 LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEP------GPPYT--TDMHLVTNSGKMV 486
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T ++R + + +N
Sbjct: 487 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYN 546
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
EP S F+F+LSTRAGGLG+NL AD VI++DSDWNP DLQA DRAHRIGQ VRV R
Sbjct: 547 EPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
IT N+VEERI+ A KL +D + Q LNK
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLV-DQNLNK 644
Score = 266 (98.7 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 61/145 (42%), Positives = 79/145 (54%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+LLNFLLP +F S F+ WF+ +K ++ RLH V
Sbjct: 338 TPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQK----------LVERLHMV 387
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE LP K E I +S +Q+ Y IL+ D G+
Sbjct: 388 LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTR-----ILMKDIDILNSAGKMD 442
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 443 KMRLLNILMQLRKCCNHPYLFDGAE 467
Score = 55 (24.4 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I RYK + I G
Sbjct: 888 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKI---GRYKAPFHQLRISYGTNKG 944
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 945 KNYTEEEDRFLICMLHK 961
Score = 42 (19.8 bits), Expect = 4.4e-55, Sum P(2) = 4.4e-55
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 769 LRRLKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ + +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 865 IENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQ 903
>UNIPROTKB|F1MLB1 [details] [associations]
symbol:F1MLB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:DAAA02044957
EMBL:DAAA02044956 IPI:IPI01018591 Ensembl:ENSBTAT00000027216
Uniprot:F1MLB1
Length = 3137
Score = 508 (183.9 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 116/339 (34%), Positives = 186/339 (54%)
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
VG+ T D A EA + V A ++ G L++YQ GL+W+ LY
Sbjct: 1047 VGKPHTRDIAEVTAVAEAILPKGSARISTAVKLNAPALLYGALRDYQKIGLDWLAKLYRK 1106
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADE GLGKTVQ IA +L + N GP+LVIV + W LE ++W P
Sbjct: 1107 NLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVIVRSCNILKWELELKRWCPGLKT 1166
Query: 624 VAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
+ Y GS +A Q + + FN+ +T+Y+ K + ++++WKC++IDE R+K
Sbjct: 1167 LLYVGSHRELKAKRQEWTEPNSFNICITSYKQFFKGFASFTRVRWKCLVIDEMQRVKGMT 1226
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
+ + + T S R+LL PL N ELW +++FL+P I + + + P
Sbjct: 1227 ERHWEAVFTL-QSQQRLLLIDAPLHNTFLELWTMVHFLIPGISRP------YLHFPLKAP 1279
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
E+ N++ ++ RLH+V +PF+LRR K++VE QL +K E+++KC +S QK LY+
Sbjct: 1280 NEE---NQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYED 1336
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 841
++L G+++ G + + +++L+++CNHP
Sbjct: 1337 -----VILQPGTQEALKS-GHFVDVLSILLRLQRICNHP 1369
Score = 262 (97.3 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 55/137 (40%), Positives = 83/137 (60%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1896 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1955
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+R FN + + F LLST + G++L AD V+ +D D NP D +AQ+ RIG++ +
Sbjct: 1956 MRSFNR-DRRIFCALLSTHSRATGVSLVEADAVVFYDHDLNPVMDAKAQEWCDRIGRRKD 2014
Query: 991 VRVLRLITVNSVEERIL 1007
V + RL++ NS+EE++L
Sbjct: 2015 VHIYRLVSGNSIEEKLL 2031
Score = 262 (97.3 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 55/137 (40%), Positives = 83/137 (60%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1896 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1955
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+R FN + + F LLST + G++L AD V+ +D D NP D +AQ+ RIG++ +
Sbjct: 1956 MRSFNR-DRRIFCALLSTHSRATGVSLVEADAVVFYDHDLNPVMDAKAQEWCDRIGRRKD 2014
Query: 288 VRVLRLITVNSVEERIL 304
V + RL++ NS+EE++L
Sbjct: 2015 VHIYRLVSGNSIEEKLL 2031
Score = 201 (75.8 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 44/137 (32%), Positives = 80/137 (58%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 61
PL N ELW +++FL+P I + + + P E+ N++ ++ RLH+V
Sbjct: 1248 PLHNTFLELWTMVHFLIPGISRP------YLHFPLKAPNEE---NQDYYHKVVIRLHRVT 1298
Query: 62 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 121
+PF+LRR K++VE QL +K E+++KC +S QK LY+ ++L G+++ G
Sbjct: 1299 QPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYED-----VILQPGTQEALKS-GHF 1352
Query: 122 RALKNTIVQLRKLCNHP 138
+ + +++L+++CNHP
Sbjct: 1353 VDVLSILLRLQRICNHP 1369
Score = 42 (19.8 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 1010 ARYKLNMDEKVIQAGM-FDQKSTGSERHE 1037
A + N D K A Q STG+ RH+
Sbjct: 1507 ATFSANPDAKAAAAPFQTSQASTGAPRHQ 1535
>ZFIN|ZDB-GENE-070228-1 [details] [associations]
symbol:ercc6 "excision repair cross-complementing
rodent repair deficiency, complementation group 6" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-070228-1 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
EMBL:CR762493 IPI:IPI00933448 RefSeq:XP_688972.2
Ensembl:ENSDART00000112380 GeneID:560477 KEGG:dre:560477
NextBio:20883461 Bgee:F1RDN1 Uniprot:F1RDN1
Length = 1390
Score = 698 (250.8 bits), Expect = 1.3e-65, P = 1.3e-65
Identities = 173/536 (32%), Positives = 281/536 (52%)
Query: 506 EKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNL 565
++ E + ++AGEE + S A + E + KL +YQ G+ WM L+
Sbjct: 447 QRLREKEAKREAGEEESDESDAE-FDEGFKIPGFLWK--KLFKYQQTGVRWMWELHCQQA 503
Query: 566 NGILADEMGLGKTVQTIALLTYLMEKK-----KN-----LGPYLVIVPLSTLSNWVLEFE 615
GIL DEMGLGKT+Q IA L L K N LGP +++ P + + WV EF
Sbjct: 504 GGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSNYRYAGLGPTVIVCPATVMHQWVKEFH 563
Query: 616 KWAPSANVVAYK--GSPLARRALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIID 673
W P V GS +++ + +L+T+Y +I + + + W +I+D
Sbjct: 564 TWWPPFRVAVLHDTGSFTSKKEKLIPEIVASHGILITSYSYIRIMQDYIQRYDWHYVILD 623
Query: 674 EGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQ 733
EGH+++N + +T F + HR +L+G+P+QN L ELW+L +F+ P + F +
Sbjct: 624 EGHKIRNPNAGVTTACKQF-RTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFME 682
Query: 734 WFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQL--PEKVEYI 787
F+ P G V++ + L + P+LLRR+K +V++ L P+K E +
Sbjct: 683 QFSVPITMGGYANASPVQVQTAYKCACV--LRDTINPYLLRRMKADVKANLSLPDKNEQV 740
Query: 788 IKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNI 847
+ C ++ Q+ +YQ D E + G + ++ LRK+CNHP +F
Sbjct: 741 LFCRLTEDQRQVYQ-------TFLDSKEVYQILNGDMQVFSG-LIALRKICNHPDLFTG- 791
Query: 848 EEKYCQHIGQNN-TVVSGPDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILED 906
+ + I + T ++ SGK +++ +L + + HRVL+F Q Q++ ILE
Sbjct: 792 GPRLLRGIPHDQLTEEEHFGYWKRSGKMIVVESLLRLWHKQGHRVLLFTQSRQMLEILEV 851
Query: 907 YFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIF 966
+ FSYL++DGTT R L+ +FN+ + F+F+L+TR GGLG+NL A+ V+I+
Sbjct: 852 FVKENGFSYLKMDGTTTIASRQPLIAQFNQNKD-IFVFILTTRVGGLGVNLTGANRVVIY 910
Query: 967 DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQ 1022
D DWNP D QA++RA RIGQK +V V RL+T ++EE+I +K + +V++
Sbjct: 911 DPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK 966
Score = 460 (167.0 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 107/310 (34%), Positives = 172/310 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRR 56
+P+QN L ELW+L +F+ P + F + F+ P G V++ +
Sbjct: 653 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVQTAYKCACV-- 710
Query: 57 LHKVLRPFLLRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 114
L + P+LLRR+K +V++ L P+K E ++ C ++ Q+ +YQ D E
Sbjct: 711 LRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQ-------TFLDSKEVY 763
Query: 115 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNN-TVVSGPDIYRTSGKFEL 173
+ G + ++ LRK+CNHP +F + + I + T ++ SGK +
Sbjct: 764 QILNGDMQVFSG-LIALRKICNHPDLFTG-GPRLLRGIPHDQLTEEEHFGYWKRSGKMIV 821
Query: 174 LDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNE 233
++ +L + + HRVL+F Q Q++ ILE + FSYL++DGTT R L+ +FN+
Sbjct: 822 VESLLRLWHKQGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLIAQFNQ 881
Query: 234 PESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRL 293
+ F+F+L+TR GGLG+NL A+ V+I+D DWNP D QA++RA RIGQK +V V RL
Sbjct: 882 NKD-IFVFILTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRL 940
Query: 294 ITVNSVEERI 303
+T ++EE+I
Sbjct: 941 LTAGTIEEKI 950
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 692 (248.7 bits), Expect = 1.3e-65, Sum P(2) = 1.3e-65
Identities = 152/346 (43%), Positives = 210/346 (60%)
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
V +KTE +E + +E S E ++ VNG+L+ YQI+G+ W+VSL+ N
Sbjct: 156 VRRRKTEHEEDAELLKEED--SDDDESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKN 213
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
+ GILADEMGLGKT+QTI+ L YL +K GP+LVI P STL+NW+ E +W P N
Sbjct: 214 KIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNA 273
Query: 624 VAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
+G R L Q ++ F+V++ +YE II++KS L KI W+ +IIDE HR+KN
Sbjct: 274 FILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEE 333
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
L+Q L F S +R+L+TGTPLQN L ELWALLNFLLP IF F+ WF++
Sbjct: 334 SMLSQVLREF-TSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSS----- 387
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
E EE+ I+++LH VL+PFLLRR+K +VE+ L K E + MS +QK Y+
Sbjct: 388 ----ESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKK 443
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
+ + + +GS K E R L N ++QLRK CNHP++F E
Sbjct: 444 ILEKDLDAVNGSNGSK--ESKTRLL-NIMMQLRKCCNHPYLFDGAE 486
Score = 632 (227.5 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 133/289 (46%), Positives = 188/289 (65%)
Query: 44 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 103
E EE+ I+++LH VL+PFLLRR+K +VE+ L K E + MS +QK Y+ + +
Sbjct: 388 ESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEK 447
Query: 104 GILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD 163
+ +GS K E R L N ++QLRK CNHP++F E G T +
Sbjct: 448 DLDAVNGSNGSK--ESKTRLL-NIMMQLRKCCNHPYLFDGAEP------GPPYT--TDEH 496
Query: 164 IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSED 223
+ + K ++LD++L K KE RVL+F QM++L+ ILEDY +R++ Y R+DG+T ED
Sbjct: 497 LVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHED 556
Query: 224 RGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIG 283
R + + +N P+SK F+FLL+TRAGGLG+NL +AD V+++DSDWNP DLQA DRAHRIG
Sbjct: 557 RIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIG 616
Query: 284 QKNEVRVLRLITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNKA 332
QK +V+V RL+T NSVEE+IL A KL +D+ +N T+ +K NKA
Sbjct: 617 QKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKA 665
Score = 620 (223.3 bits), Expect = 2.9e-57, P = 2.9e-57
Identities = 130/276 (47%), Positives = 182/276 (65%)
Query: 747 ELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNR 806
E EE+ I+++LH VL+PFLLRR+K +VE+ L K E + MS +QK Y+ + +
Sbjct: 388 ESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEK 447
Query: 807 GILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPD 866
+ +GS K E R L N ++QLRK CNHP++F E G T +
Sbjct: 448 DLDAVNGSNGSK--ESKTRLL-NIMMQLRKCCNHPYLFDGAEP------GPPYT--TDEH 496
Query: 867 IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSED 926
+ + K ++LD++L K KE RVL+F QM++L+ ILEDY +R++ Y R+DG+T ED
Sbjct: 497 LVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHED 556
Query: 927 RGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIG 986
R + + +N P+SK F+FLL+TRAGGLG+NL +AD V+++DSDWNP DLQA DRAHRIG
Sbjct: 557 RIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIG 616
Query: 987 QKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQ 1022
QK +V+V RL+T NSVEE+IL A KL +D+ VIQ
Sbjct: 617 QKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQ 652
Score = 286 (105.7 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 64/145 (44%), Positives = 86/145 (59%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP IF F+ WF++ E EE+ I+++LH V
Sbjct: 354 TPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSS---------ESTEEDQDKIVKQLHTV 404
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE+ L K E + MS +QK Y+ + + + +GS K E
Sbjct: 405 LQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSK--ESK 462
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
R L N ++QLRK CNHP++F E
Sbjct: 463 TRLL-NIMMQLRKCCNHPYLFDGAE 486
Score = 48 (22.0 bits), Expect = 1.3e-65, Sum P(2) = 1.3e-65
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 888 KHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESK 940
K +V +F +T +E+ + R LRLD ++R L +K N+ +SK
Sbjct: 618 KKQVKVFRLVTD--NSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSK 668
Score = 48 (22.0 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 185 KHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESK 237
K +V +F +T +E+ + R LRLD ++R L +K N+ +SK
Sbjct: 618 KKQVKVFRLVTD--NSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSK 668
Score = 39 (18.8 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 362 EDEEGYRKLIDQKKDK 377
ED E Y K+I+ +++K
Sbjct: 938 EDYEKYLKIIENEEEK 953
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 678 (243.7 bits), Expect = 4.4e-65, Sum P(2) = 4.4e-65
Identities = 143/307 (46%), Positives = 200/307 (65%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
NG++++YQ++GL W+ SL +N +NGILADEMGLGKT+QTI+++ Y+ K P+LVIV
Sbjct: 129 NGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIV 188
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLAR-RALQGRMKNSKFNVLLTTYEFIIKDKSV 661
P STL NW EF+KW PS N V G AR + L+ + KF+V TTYE ++K K+
Sbjct: 189 PKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQ 248
Query: 662 LSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLL 721
L K+ W+ +IIDE HR+KN KL++T+ NS +R+L+TGTPLQN L ELWALLNFLL
Sbjct: 249 LKKLNWRYIIIDEAHRIKNEKSKLSETVREL-NSENRLLITGTPLQNNLHELWALLNFLL 307
Query: 722 PSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP 781
P IF S F+ WF+ A +G N + +++RLHKVL+PFLLRR+K +VE L
Sbjct: 308 PDIFTSSDDFDSWFSND-AMSG-----NTD----LVQRLHKVLQPFLLRRIKSDVEKSLL 357
Query: 782 EKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 841
K E + +S +Q+ Y + + I + +G+ GK + AR L N ++ LRK NHP
Sbjct: 358 PKKEVKVYVGLSKMQREWYTKVLMKDIDIINGA--GKVEK--AR-LMNILMHLRKCVNHP 412
Query: 842 FMFQNIE 848
++F E
Sbjct: 413 YLFDGAE 419
Score = 606 (218.4 bits), Expect = 2.2e-55, Sum P(2) = 2.2e-55
Identities = 131/289 (45%), Positives = 181/289 (62%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
+++RLHKVL+PFLLRR+K +VE L K E + +S +Q+ Y + + I + +G+
Sbjct: 332 LVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGA- 390
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
GK + AR L N ++ LRK NHP++F E G T + + SGK
Sbjct: 391 -GKVEK--AR-LMNILMHLRKCVNHPYLFDGAEP------GPPFT--TDQHLVDNSGKMV 438
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++L KFKE RVL+F Q ++++ +LED+ WR + Y RLDG+T EDR + +N
Sbjct: 439 VLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYN 498
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
P+SK FIF+L+TRAGGLG+NL AD VII+DSDWNP DLQA DRAHRIGQK +VRV R
Sbjct: 499 APDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFR 558
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILH 1044
LIT N+V+ERI+ A KL +D VIQ G + + + + I H
Sbjct: 559 LITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGDMISMIRH 607
Score = 590 (212.7 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 127/276 (46%), Positives = 175/276 (63%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
+++RLHKVL+PFLLRR+K +VE L K E + +S +Q+ Y + + I + +G+
Sbjct: 332 LVQRLHKVLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGA- 390
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
GK + AR L N ++ LRK NHP++F E G T + + SGK
Sbjct: 391 -GKVEK--AR-LMNILMHLRKCVNHPYLFDGAEP------GPPFT--TDQHLVDNSGKMV 438
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++L KFKE RVL+F Q ++++ +LED+ WR + Y RLDG+T EDR + +N
Sbjct: 439 VLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYN 498
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
P+SK FIF+L+TRAGGLG+NL AD VII+DSDWNP DLQA DRAHRIGQK +VRV R
Sbjct: 499 APDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFR 558
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQK 328
LIT N+V+ERI+ A KL +D + + QK
Sbjct: 559 LITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQK 594
Score = 253 (94.1 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 63/145 (43%), Positives = 87/145 (60%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP IF S F+ WF+ A +G N + +++RLHKV
Sbjct: 290 TPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSND-AMSG-----NTD----LVQRLHKV 339
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRR+K +VE L K E + +S +Q+ Y + + I + +G+ GK +
Sbjct: 340 LQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGA--GKVEK-- 395
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
AR L N ++ LRK NHP++F E
Sbjct: 396 AR-LMNILMHLRKCVNHPYLFDGAE 419
Score = 52 (23.4 bits), Expect = 4.4e-65, Sum P(2) = 4.4e-65
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W ++LQ ++ +K E R+ R V +++ +I A+YK + I G
Sbjct: 844 WERIEELQDSEKVLSQIEKGEARIQRKYAVKKALDAKI---AKYKAPFQQLRISYGTNKG 900
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL H+
Sbjct: 901 KTYTEEEDRFLVCETHR 917
Score = 42 (19.8 bits), Expect = 2.2e-55, Sum P(2) = 2.2e-55
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 445 TVKETNSDNKLRGEDAPPAKQIKE-W 469
TV+E NS+N+L P + E W
Sbjct: 275 TVRELNSENRLLITGTPLQNNLHELW 300
Score = 39 (18.8 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 267 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYK 310
W ++LQ ++ +K E R+ R V +++ +I A+YK
Sbjct: 844 WERIEELQDSEKVLSQIEKGEARIQRKYAVKKALDAKI---AKYK 885
>UNIPROTKB|Q96L91 [details] [associations]
symbol:EP400 "E1A-binding protein p400" species:9606 "Homo
sapiens" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IDA] [GO:0043968
"histone H2A acetylation" evidence=IDA] [GO:0043967 "histone H4
acetylation" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0016607 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 KO:K11320 EMBL:AY044869 EMBL:AC137590 EMBL:AC137632
EMBL:AB040931 EMBL:AK096311 EMBL:BC037208 EMBL:BC064554
EMBL:AB058721 EMBL:U80743 IPI:IPI00064931 IPI:IPI00167535
IPI:IPI00783692 IPI:IPI00798339 IPI:IPI00878154 RefSeq:NP_056224.3
UniGene:Hs.595201 ProteinModelPortal:Q96L91 DIP:DIP-29915N
IntAct:Q96L91 MINT:MINT-1897496 STRING:Q96L91 PhosphoSite:Q96L91
DMDM:209572748 PaxDb:Q96L91 PRIDE:Q96L91 DNASU:57634
Ensembl:ENST00000330386 Ensembl:ENST00000332482
Ensembl:ENST00000333577 Ensembl:ENST00000389561
Ensembl:ENST00000389562 Ensembl:ENST00000537902
Ensembl:ENST00000541296 GeneID:57634 KEGG:hsa:57634 UCSC:uc001ujm.3
UCSC:uc001ujn.3 UCSC:uc021rgq.1 CTD:57634 GeneCards:GC12P132434
H-InvDB:HIX0021564 HGNC:HGNC:11958 HPA:HPA016704 MIM:606265
neXtProt:NX_Q96L91 PharmGKB:PA27808 HOVERGEN:HBG051488
InParanoid:Q96L91 OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400
GenomeRNAi:57634 NextBio:64345 ArrayExpress:Q96L91 Bgee:Q96L91
CleanEx:HS_EP400 Genevestigator:Q96L91 GermOnline:ENSG00000183495
Uniprot:Q96L91
Length = 3159
Score = 502 (181.8 bits), Expect = 4.4e-65, Sum P(2) = 4.4e-65
Identities = 108/306 (35%), Positives = 181/306 (59%)
Query: 538 ASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGP 597
A ++ G L++YQ GL+W+ LY NLNGILADE GLGKTVQ IA +L + N GP
Sbjct: 1083 APSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGP 1142
Query: 598 YLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFII 656
+LV+V + W LE ++W P +++Y GS +A Q + + F+V +T+Y
Sbjct: 1143 HLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPNSFHVCITSYTQFF 1202
Query: 657 KDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWAL 716
+ + ++++WKC++IDE R+K + + + T S R+LL +PL N ELW +
Sbjct: 1203 RGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTL-QSQQRLLLIDSPLHNTFLELWTM 1261
Query: 717 LNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEV 776
++FL+P I + + ++P E+ +++ ++ RLH+V +PF+LRR K++V
Sbjct: 1262 VHFLVPGISRP------YLSSPLRAPSEE---SQDYYHKVVIRLHRVTQPFILRRTKRDV 1312
Query: 777 ESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG-KTGEGGARALKNTIVQLR 835
E QL +K E+++KC +S QK LY+ ++L G+++ K+G L + +V+L+
Sbjct: 1313 EKQLTKKYEHVLKCRLSNRQKALYED-----VILQPGTQEALKSGHF-VNVL-SILVRLQ 1365
Query: 836 KLCNHP 841
++CNHP
Sbjct: 1366 RICNHP 1371
Score = 263 (97.6 bits), Expect = 4.4e-65, Sum P(2) = 4.4e-65
Identities = 55/137 (40%), Positives = 84/137 (61%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1897 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1956
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+R FN + + F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1957 MRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 2015
Query: 991 VRVLRLITVNSVEERIL 1007
+ + RL++ NS+EE++L
Sbjct: 2016 IHIYRLVSGNSIEEKLL 2032
Score = 263 (97.6 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 55/137 (40%), Positives = 84/137 (61%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1897 SGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQEL 1956
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+R FN + + F +LST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1957 MRSFNR-DRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 2015
Query: 288 VRVLRLITVNSVEERIL 304
+ + RL++ NS+EE++L
Sbjct: 2016 IHIYRLVSGNSIEEKLL 2032
Score = 205 (77.2 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 52/163 (31%), Positives = 96/163 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
+PL N ELW +++FL+P I + + ++P E+ +++ ++ RLH+V
Sbjct: 1249 SPLHNTFLELWTMVHFLVPGISRP------YLSSPLRAPSEE---SQDYYHKVVIRLHRV 1299
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG-KTGEG 119
+PF+LRR K++VE QL +K E+++KC +S QK LY+ ++L G+++ K+G
Sbjct: 1300 TQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYED-----VILQPGTQEALKSGHF 1354
Query: 120 GARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGP 162
L + +V+L+++CNHP + +E + H G ++ V+GP
Sbjct: 1355 -VNVL-SILVRLQRICNHPGL---VEPR---HPG--SSYVAGP 1387
>MGI|MGI:1276124 [details] [associations]
symbol:Ep400 "E1A binding protein p400" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0043968 "histone H2A acetylation" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1276124 GO:GO:0005524 GO:GO:0003677
GO:GO:0016607 GO:GO:0003682 GO:GO:0035267 GO:GO:0043968
GO:GO:0043967 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 KO:K11320 CTD:57634 HOVERGEN:HBG051488
OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400 EMBL:AB092694
EMBL:AB092695 EMBL:AC161348 EMBL:AK006168 EMBL:AK030095
EMBL:AK037693 EMBL:AK046892 EMBL:AK163566 EMBL:AK164049
EMBL:AK122517 EMBL:BC022153 EMBL:BC085511 IPI:IPI00229659
IPI:IPI00404291 IPI:IPI00480329 IPI:IPI00720144 IPI:IPI01008391
RefSeq:NP_083613.2 RefSeq:NP_775089.1 UniGene:Mm.270487
ProteinModelPortal:Q8CHI8 IntAct:Q8CHI8 STRING:Q8CHI8
PhosphoSite:Q8CHI8 PaxDb:Q8CHI8 PRIDE:Q8CHI8
Ensembl:ENSMUST00000041558 Ensembl:ENSMUST00000112435
Ensembl:ENSMUST00000112436 GeneID:75560 KEGG:mmu:75560
UCSC:uc008yrf.1 UCSC:uc008yrg.1 UCSC:uc008yrh.1 InParanoid:Q8CHI8
Bgee:Q8CHI8 CleanEx:MM_EP400 Genevestigator:Q8CHI8
GermOnline:ENSMUSG00000029505 Uniprot:Q8CHI8
Length = 3072
Score = 496 (179.7 bits), Expect = 5.5e-65, Sum P(2) = 5.5e-65
Identities = 113/340 (33%), Positives = 185/340 (54%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
++G+ T+D A EA + V A ++ G L++YQ GL+W+ LY
Sbjct: 1047 SIGKSNTKDITEVTAVAEAILPKGSARVTTAVKFSAPSLLYGALRDYQKIGLDWLAKLYR 1106
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NLNGILADE GLGKTVQ IA +L + N GP+LV++ + W LE ++W P
Sbjct: 1107 KNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVMRSCNILKWELELKRWCPGLK 1166
Query: 623 VVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
++Y GS +A Q + + F++ +T+Y+ + + S++ WKC+++DE R+K
Sbjct: 1167 TLSYVGSHRELKAKRQEWTEPNNFHICITSYKQFFRGYTAFSRVHWKCLVVDEMQRVKGM 1226
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
+ + + S R+LL PL N ELW +++FL+P I + +F P
Sbjct: 1227 TERHWEAIFKL-QSQQRLLLIDVPLHNTFLELWTMVHFLIPGISRPYLSF------PLKA 1279
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
E+ N++ ++ RLH+V +PF+LRR K++VE QL K E+++KC +S QK LY+
Sbjct: 1280 PNEE---NQDYYHKMVIRLHRVTQPFILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALYE 1336
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 841
+ IL E K+G ++ + + +L+++CNHP
Sbjct: 1337 DV----ILQPRTQEALKSGH--FVSVLSVLTRLQRICNHP 1370
Score = 268 (99.4 bits), Expect = 5.5e-65, Sum P(2) = 5.5e-65
Identities = 56/137 (40%), Positives = 84/137 (61%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1813 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQEL 1872
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+R FN + + F LLST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1873 MRSFNR-DRRIFCALLSTHSRATGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1931
Query: 991 VRVLRLITVNSVEERIL 1007
+ + RL++ NS+EE++L
Sbjct: 1932 IHIYRLVSGNSIEEKLL 1948
Score = 268 (99.4 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 56/137 (40%), Positives = 84/137 (61%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1813 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYVRIDENANSEQRQEL 1872
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+R FN + + F LLST + G+NL ADTV+ +D+D NP D +AQ+ RIG+ +
Sbjct: 1873 MRSFNR-DRRIFCALLSTHSRATGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKD 1931
Query: 288 VRVLRLITVNSVEERIL 304
+ + RL++ NS+EE++L
Sbjct: 1932 IHIYRLVSGNSIEEKLL 1948
Score = 199 (75.1 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 47/137 (34%), Positives = 78/137 (56%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 61
PL N ELW +++FL+P I + +F P E+ N++ ++ RLH+V
Sbjct: 1249 PLHNTFLELWTMVHFLIPGISRPYLSF------PLKAPNEE---NQDYYHKMVIRLHRVT 1299
Query: 62 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 121
+PF+LRR K++VE QL K E+++KC +S QK LY+ + IL E K+G
Sbjct: 1300 QPFILRRTKRDVEKQLTRKYEHVLKCRLSSRQKALYEDV----ILQPRTQEALKSGH--F 1353
Query: 122 RALKNTIVQLRKLCNHP 138
++ + + +L+++CNHP
Sbjct: 1354 VSVLSVLTRLQRICNHP 1370
>UNIPROTKB|D3ZZZ1 [details] [associations]
symbol:Ercc6 "Protein Ercc6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311509
GO:GO:0005524 GO:GO:0008630 GO:GO:0005730 GO:GO:0006284
GO:GO:0003677 GO:GO:0009636 GO:GO:0003682 GO:GO:0045494
GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257
GO:GO:0006283 GO:GO:0008094 GO:GO:0008023 GO:GO:0032786
GO:GO:0006290 GO:GO:0007256 GO:GO:0000303 IPI:IPI00358023
Ensembl:ENSRNOT00000038493 ArrayExpress:D3ZZZ1 Uniprot:D3ZZZ1
Length = 1475
Score = 702 (252.2 bits), Expect = 6.4e-65, Sum P(2) = 6.4e-65
Identities = 168/498 (33%), Positives = 271/498 (54%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKK----------KN 594
KL +YQ G+ W+ L+ GIL DEMGLGKT+Q IA L L K +
Sbjct: 500 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 559
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANV-VAYK-GSPLARRALQGRMKNSKFNVLLTTY 652
LGP L++ P + + WV EF W P V + ++ GS R+ R VL+T+Y
Sbjct: 560 LGPTLIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSCAHRKERLVRDIVHCHGVLITSY 619
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
+I + +S+ W +I+DEGH+++N + +T F + HR++L+G+P+QN L E
Sbjct: 620 SYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQF-RTPHRIILSGSPMQNNLRE 678
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFL 768
LW+L +F P + F + F+ P G V++ + L + P+L
Sbjct: 679 LWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDTINPYL 736
Query: 769 LRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQH-LHNRGIL-LTDGSEKGKTGEGGA 824
LRR+K +V+ L P+K E ++ C ++ Q +YQ+ + ++ + + +G + +G
Sbjct: 737 LRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGENQIFSG---- 792
Query: 825 RALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKF 884
+V LRK+CNHP +F K + ++ ++ SGK +++ +L +
Sbjct: 793 ------LVALRKICNHPDLFSG-GPKNTSALPEDGLEEEQFGYWKRSGKMIVVESLLKIW 845
Query: 885 KETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIF 944
+ RVL+F Q Q++ ILE + +SYL++DGTT R L+ K+NE ++ F+F
Sbjct: 846 HKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNE-DTSIFVF 904
Query: 945 LLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEE 1004
LL+TR GGLG+NL A+ VII+D DWNP D QA++RA RIGQK +V V RL+T ++EE
Sbjct: 905 LLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE 964
Query: 1005 RILAAARYKLNMDEKVIQ 1022
+I +K + +V++
Sbjct: 965 KIYHRQIFKQFLTNRVLK 982
Score = 457 (165.9 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 107/311 (34%), Positives = 174/311 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRR 56
+P+QN L ELW+L +F P + F + F+ P G V++ +
Sbjct: 670 SPMQNNLRELWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV-- 727
Query: 57 LHKVLRPFLLRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQH-LHNRGIL-LTDGSE 112
L + P+LLRR+K +V+ L P+K E ++ C ++ Q +YQ+ + ++ + + +G
Sbjct: 728 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNGEN 787
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
+ +G +V LRK+CNHP +F K + ++ ++ SGK
Sbjct: 788 QIFSG----------LVALRKICNHPDLFSG-GPKNTSALPEDGLEEEQFGYWKRSGKMI 836
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+++ +L + + RVL+F Q Q++ ILE + +SYL++DGTT R L+ K+N
Sbjct: 837 VVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYN 896
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
E ++ F+FLL+TR GGLG+NL A+ VII+D DWNP D QA++RA RIGQK +V V R
Sbjct: 897 E-DTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 955
Query: 293 LITVNSVEERI 303
L+T ++EE+I
Sbjct: 956 LLTAGTIEEKI 966
Score = 40 (19.1 bits), Expect = 1.1e-37, Sum P(2) = 1.1e-37
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 506 EKKTEDDEYKDAGEEAT---YYSIAHTYHEKVTEQASIMVNGKLKEYQIKGL 554
+K ++DA E T + YH++ TEQ S + +Y ++ L
Sbjct: 1187 QKAKNSRHHRDAKFEGTRVPHLVKKRRYHQQTTEQESGAKDRSSDDYVLEKL 1238
Score = 39 (18.8 bits), Expect = 6.4e-65, Sum P(2) = 6.4e-65
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 38 TTGEKVELNEEETILIIRR--LHKVLRPFLLRRLKKEVESQLP 78
T GE+ E EEE + ++ + L+P LR+ +K E ++P
Sbjct: 377 TDGEEEEEQEEEGVAVLSSDDISYELKP--LRKGQK-YEKKVP 416
>UNIPROTKB|Q03468 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=IDA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0009411 "response to UV"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0006284
"base-excision repair" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
Uniprot:Q03468
Length = 1493
Score = 700 (251.5 bits), Expect = 7.3e-65, Sum P(2) = 7.3e-65
Identities = 162/496 (32%), Positives = 268/496 (54%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKK----------KN 594
KL +YQ G+ W+ L+ GIL DEMGLGKT+Q IA L L K +
Sbjct: 506 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 565
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANV-VAYK-GSPLARRALQGRMKNSKFNVLLTTY 652
LGP +++ P + + WV EF W P V + ++ GS ++ R +L+T+Y
Sbjct: 566 LGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHGILITSY 625
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
+I + +S+ W +I+DEGH+++N + +T F + HR++L+G+P+QN L E
Sbjct: 626 SYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQF-RTPHRIILSGSPMQNNLRE 684
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFL 768
LW+L +F+ P + F + F+ P G V++ + L + P+L
Sbjct: 685 LWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDTINPYL 742
Query: 769 LRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
LRR+K +V+ L P+K E ++ C ++ Q +YQ+ D E + G +
Sbjct: 743 LRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF-------VDSKEVYRILNGEMQI 795
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
++ LRK+CNHP +F K + + + ++ SGK +++ +L + +
Sbjct: 796 FSG-LIALRKICNHPDLFSG-GPKNLKGLPDDELEEDQFGYWKRSGKMIVVESLLKIWHK 853
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
RVL+F Q Q++ ILE + + ++YL++DGTT R L+ ++NE ++ F+FLL
Sbjct: 854 QGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNE-DTSIFVFLL 912
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
+TR GGLG+NL A+ V+I+D DWNP D QA++RA RIGQK +V V RL+T ++EE+I
Sbjct: 913 TTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 972
Query: 1007 LAAARYKLNMDEKVIQ 1022
+K + +V++
Sbjct: 973 YHRQIFKQFLTNRVLK 988
Score = 459 (166.6 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 104/309 (33%), Positives = 171/309 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRR 56
+P+QN L ELW+L +F+ P + F + F+ P G V++ +
Sbjct: 676 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV-- 733
Query: 57 LHKVLRPFLLRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 114
L + P+LLRR+K +V+ L P+K E ++ C ++ Q +YQ+ D E
Sbjct: 734 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF-------VDSKEVY 786
Query: 115 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELL 174
+ G + ++ LRK+CNHP +F K + + + ++ SGK ++
Sbjct: 787 RILNGEMQIFSG-LIALRKICNHPDLFSG-GPKNLKGLPDDELEEDQFGYWKRSGKMIVV 844
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
+ +L + + RVL+F Q Q++ ILE + + ++YL++DGTT R L+ ++NE
Sbjct: 845 ESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNE- 903
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
++ F+FLL+TR GGLG+NL A+ V+I+D DWNP D QA++RA RIGQK +V V RL+
Sbjct: 904 DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLL 963
Query: 295 TVNSVEERI 303
T ++EE+I
Sbjct: 964 TAGTIEEKI 972
Score = 43 (20.2 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 628 GSPLARRALQGRMKNSKFNV 647
G+P +++ G+ +NS F+V
Sbjct: 1322 GAPAGKKSRFGKKRNSNFSV 1341
Score = 41 (19.5 bits), Expect = 7.3e-65, Sum P(2) = 7.3e-65
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 502 KAVGEKKTEDDEYKDAGEEATYYSI 526
K V ++ +DD + +GEEA S+
Sbjct: 415 KKVPVQEIDDDFFPSSGEEAEAASV 439
>UNIPROTKB|F1SDX0 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
Uniprot:F1SDX0
Length = 1481
Score = 702 (252.2 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 165/496 (33%), Positives = 268/496 (54%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKK----------KN 594
KL +YQ G+ W+ L+ GIL DEMGLGKT+Q IA L L K +
Sbjct: 495 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 554
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANV-VAYK-GSPLARRALQGRMKNSKFNVLLTTY 652
LGP +++ P + + WV EF W P V + ++ GS ++ R +L+T+Y
Sbjct: 555 LGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKLVRDIAHCHGILITSY 614
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
+I + +S+ W +I+DEGH+++N + +T F + HR++L+G+P+QN L E
Sbjct: 615 SYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQF-RTPHRIILSGSPMQNNLRE 673
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFL 768
LW+L +F+ P + F + F+ P G V++ + L + P+L
Sbjct: 674 LWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDTINPYL 731
Query: 769 LRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
LRR+K +V+ L P+K E ++ C ++ Q +YQ+ D E + G +
Sbjct: 732 LRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF-------IDSKEVYRILNGEMQI 784
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
+V LRK+CNHP +F + + + I ++ SGK +++ +L + +
Sbjct: 785 FSG-LVALRKICNHPDLFSGGPKNF-KGIPGEELEEDQFGYWKRSGKMIVVESLLKIWHK 842
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
RVL+F Q Q++ ILE + + +SYL++DGTT R L+ ++NE ++ F+FLL
Sbjct: 843 QGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNE-DASIFVFLL 901
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
+TR GGLG+NL A+ VII+D DWNP D QA++RA RIGQK +V V RL+T ++EE+I
Sbjct: 902 TTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 961
Query: 1007 LAAARYKLNMDEKVIQ 1022
+K + +V++
Sbjct: 962 YHRQIFKQFLTNRVLK 977
Score = 462 (167.7 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 107/309 (34%), Positives = 171/309 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRR 56
+P+QN L ELW+L +F+ P + F + F+ P G V++ +
Sbjct: 665 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV-- 722
Query: 57 LHKVLRPFLLRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 114
L + P+LLRR+K +V+ L P+K E ++ C ++ Q +YQ+ D E
Sbjct: 723 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNF-------IDSKEVY 775
Query: 115 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELL 174
+ G + +V LRK+CNHP +F + + + I ++ SGK ++
Sbjct: 776 RILNGEMQIFSG-LVALRKICNHPDLFSGGPKNF-KGIPGEELEEDQFGYWKRSGKMIVV 833
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
+ +L + + RVL+F Q Q++ ILE + + +SYL++DGTT R L+ ++NE
Sbjct: 834 ESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNE- 892
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
++ F+FLL+TR GGLG+NL A+ VII+D DWNP D QA++RA RIGQK +V V RL+
Sbjct: 893 DASIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLL 952
Query: 295 TVNSVEERI 303
T ++EE+I
Sbjct: 953 TAGTIEEKI 961
Score = 42 (19.8 bits), Expect = 2.0e-38, Sum P(2) = 2.0e-38
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 628 GSPLARRALQGRMKNSKFNV 647
G+P R++ G+ +NS F V
Sbjct: 1309 GAPAGRKSRFGQKRNSNFAV 1328
Score = 39 (18.8 bits), Expect = 4.0e-38, Sum P(2) = 4.0e-38
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 697 HRVLLT--GTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNE 750
H VL T + KLP+L A N PS KS + + NA AT+ ++ L +
Sbjct: 1030 HPVLGTDQNVAMGKKLPDLNASANDATPSEEKSIAMGAE-INA--ATSNQEDPLKD 1082
Score = 37 (18.1 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 502 KAVGEKKTEDDEYKDAGEEA 521
K V + +DD + +GEEA
Sbjct: 407 KKVTVQDIDDDFFPSSGEEA 426
>UNIPROTKB|E2QSK6 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
transcription, elongation" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0010332 "response to gamma
radiation" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
Length = 1486
Score = 701 (251.8 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 166/496 (33%), Positives = 269/496 (54%)
Query: 545 KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKK----------KN 594
KL +YQ G+ W+ L+ GIL DEMGLGKT+Q IA L L K K
Sbjct: 502 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFKG 561
Query: 595 LGPYLVIVPLSTLSNWVLEFEKWAPSANV-VAYK-GSPLARRALQGRMKNSKFNVLLTTY 652
LGP +++ P + + WV EF W P V + ++ GS ++ R +L+T+Y
Sbjct: 562 LGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKLIRDIAHCHGILITSY 621
Query: 653 EFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPE 712
+I + +S+ W +I+DEGH+++N + +T F + HR++L+G+P+QN L E
Sbjct: 622 SYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQF-RTPHRIILSGSPMQNNLRE 680
Query: 713 LWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRRLHKVLRPFL 768
LW+L +F+ P + F + F+ P G V++ + L + P+L
Sbjct: 681 LWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV--LRDTINPYL 738
Query: 769 LRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
LRR+K +V+ L P+K E ++ C ++ Q +YQ+ D E + G +
Sbjct: 739 LRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNF-------IDSKEVYRILNGDMQI 791
Query: 827 LKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELLDRILPKFKE 886
+V LRK+CNHP +F K + I ++ ++ SGK +++ +L + +
Sbjct: 792 FSG-LVALRKICNHPDLFSG-GPKNLKTIPDDDEEDQF-GYWKRSGKMIVVESLLKIWHK 848
Query: 887 TKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLL 946
RVL+F Q Q++ ILE + + +SYL++DGTT R L+ ++NE ++ F+FLL
Sbjct: 849 QGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNE-DTSIFVFLL 907
Query: 947 STRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERI 1006
+TR GG+G+NL A+ VII+D DWNP D QA++RA RIGQK +V V RL+T ++EE+I
Sbjct: 908 TTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 967
Query: 1007 LAAARYKLNMDEKVIQ 1022
+K + +V++
Sbjct: 968 YHRQIFKQFLTNRVLK 983
Score = 457 (165.9 bits), Expect = 7.0e-38, Sum P(2) = 7.0e-38
Identities = 107/309 (34%), Positives = 172/309 (55%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EKVELNEEETILIIRR 56
+P+QN L ELW+L +F+ P + F + F+ P G V++ +
Sbjct: 672 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACV-- 729
Query: 57 LHKVLRPFLLRRLKKEVESQL--PEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKG 114
L + P+LLRR+K +V+ L P+K E ++ C ++ Q +YQ+ D E
Sbjct: 730 LRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNF-------IDSKEVY 782
Query: 115 KTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFELL 174
+ G + +V LRK+CNHP +F K + I ++ ++ SGK ++
Sbjct: 783 RILNGDMQIFSG-LVALRKICNHPDLFSG-GPKNLKTIPDDDEEDQF-GYWKRSGKMIVV 839
Query: 175 DRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFNEP 234
+ +L + + RVL+F Q Q++ ILE + + +SYL++DGTT R L+ ++NE
Sbjct: 840 ESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNE- 898
Query: 235 ESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLI 294
++ F+FLL+TR GG+G+NL A+ VII+D DWNP D QA++RA RIGQK +V V RL+
Sbjct: 899 DTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLL 958
Query: 295 TVNSVEERI 303
T ++EE+I
Sbjct: 959 TAGTIEEKI 967
Score = 42 (19.8 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 300 EERILAAARYKLNMDEKEYHRNNTARTQKLNKAII 334
EE + A KL ++K+Y N + K K ++
Sbjct: 385 EEELEEAEGVKLTGEDKDYELNPMLKRWKRQKKVM 419
Score = 42 (19.8 bits), Expect = 7.0e-38, Sum P(2) = 7.0e-38
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 628 GSPLARRALQGRMKNSKFNV 647
G+P ++ G+ +NSKF+V
Sbjct: 1315 GAPAGIKSRFGQKRNSKFSV 1334
Score = 37 (18.1 bits), Expect = 1.9e-64, Sum P(3) = 1.9e-64
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 502 KAVGEKKTEDDEYKDAGEEA 521
K V ++ EDD +GEEA
Sbjct: 416 KKVMVQENEDDFSPSSGEEA 435
>UNIPROTKB|J9PA15 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
EMBL:AAEX03004382 EMBL:AAEX03004383 EMBL:AAEX03004384
EMBL:AAEX03004387 EMBL:AAEX03004388 Ensembl:ENSCAFT00000048702
Uniprot:J9PA15
Length = 1555
Score = 698 (250.8 bits), Expect = 1.9e-64, Sum P(2) = 1.9e-64
Identities = 144/348 (41%), Positives = 222/348 (63%)
Query: 500 PSKAVGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWM 557
P+ +G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+
Sbjct: 580 PTATLGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWL 635
Query: 558 VSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKW 617
V++Y LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W
Sbjct: 636 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 695
Query: 618 APSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGH 676
PS ++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE
Sbjct: 696 CPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ 755
Query: 677 RMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
+KN + Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+
Sbjct: 756 NIKNFKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFS 814
Query: 737 APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
P TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q
Sbjct: 815 NPL--TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQ 871
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ LY + + K G ++ N ++QLRK+CNHP +F
Sbjct: 872 RCLYDDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 913
Score = 301 (111.0 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 782 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 838
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 839 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 892
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 893 FMSVINILMQLRKVCNHPNLF 913
Score = 40 (19.1 bits), Expect = 1.9e-64, Sum P(2) = 1.9e-64
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 230 DLHLDFIVGQTEKYSDLLSQ 249
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 680 (244.4 bits), Expect = 2.6e-64, Sum P(2) = 2.6e-64
Identities = 142/307 (46%), Positives = 198/307 (64%)
Query: 543 NGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIV 602
+G++++YQI+GL WM+SLY N +NGILADEMGLGKT+QTI+LL YL K GP++VIV
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 603 PLSTLSNWVLEFEKWAPSANVVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSV 661
P STL NWV EF+KW PS V G R ++ + +++V +T+YE I++KSV
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSV 244
Query: 662 LSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLL 721
K W+ ++IDE HR+KN KL++ L F +++R+L+TGTPLQN L ELWALLNFLL
Sbjct: 245 FKKFNWRYLVIDEAHRIKNEKSKLSEILREF-KTANRLLITGTPLQNNLHELWALLNFLL 303
Query: 722 PSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP 781
P +F S F++WFN L ++ +I RLH VL+PFLLRRLK EVE +L
Sbjct: 304 PDVFNSSEDFDEWFNTNTC-------LGDDA---LITRLHAVLKPFLLRRLKAEVEKRLK 353
Query: 782 EKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 841
K E I +S +Q+ Y + + I + +G+ GK + L+N ++QLRK NHP
Sbjct: 354 PKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGA--GKVEK---MRLQNILMQLRKCTNHP 408
Query: 842 FMFQNIE 848
++F E
Sbjct: 409 YLFDGAE 415
Score = 621 (223.7 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 137/288 (47%), Positives = 184/288 (63%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
+I RLH VL+PFLLRRLK EVE +L K E I +S +Q+ Y + + I + +G+
Sbjct: 328 LITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGA- 386
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
GK + L+N ++QLRK NHP++F E G T + + SGK
Sbjct: 387 -GKVEK---MRLQNILMQLRKCTNHPYLFDGAEP------GPPYT--TDTHLVYNSGKMA 434
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK +E RVL+F QMT+++ ILEDY WR+++Y RLDG T EDR +++FN
Sbjct: 435 ILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFN 494
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
S F+F+LSTRAGGLG+NL AD VII+DSDWNP DLQA DRAHRIGQK +VRV R
Sbjct: 495 MDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFR 554
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTI 1042
LIT ++VEE+I+ A KL +D+ VIQ G + D +S + E L I
Sbjct: 555 LITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNKDEMLNII 602
Score = 594 (214.2 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 132/281 (46%), Positives = 178/281 (63%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
+I RLH VL+PFLLRRLK EVE +L K E I +S +Q+ Y + + I + +G+
Sbjct: 328 LITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGA- 386
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
GK + L+N ++QLRK NHP++F E G T + + SGK
Sbjct: 387 -GKVEK---MRLQNILMQLRKCTNHPYLFDGAEP------GPPYT--TDTHLVYNSGKMA 434
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK +E RVL+F QMT+++ ILEDY WR+++Y RLDG T EDR +++FN
Sbjct: 435 ILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFN 494
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
S F+F+LSTRAGGLG+NL AD VII+DSDWNP DLQA DRAHRIGQK +VRV R
Sbjct: 495 MDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFR 554
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTA--RTQKLNK 331
LIT ++VEE+I+ A KL +D+ R+ +LNK
Sbjct: 555 LITESTVEEKIVERAEVKLRLDKMVIQGGRLVDNRSNQLNK 595
Score = 258 (95.9 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 63/145 (43%), Positives = 85/145 (58%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F++WFN L ++ +I RLH V
Sbjct: 286 TPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTC-------LGDDA---LITRLHAV 335
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PFLLRRLK EVE +L K E I +S +Q+ Y + + I + +G+ GK +
Sbjct: 336 LKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGA--GKVEK-- 391
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L+N ++QLRK NHP++F E
Sbjct: 392 -MRLQNILMQLRKCTNHPYLFDGAE 415
Score = 44 (20.5 bits), Expect = 2.6e-64, Sum P(2) = 2.6e-64
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 362 EDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLT 394
E E + I+ + +R FLL QT+ + +T
Sbjct: 30 EKEAEFDNKIEADRSRRFDFLLKQTEIFTHFMT 62
Score = 37 (18.1 bits), Expect = 2.2e-53, Sum P(2) = 2.2e-53
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 772 LKKEVESQLPEKV-EY 786
+ K+VE + PE+V EY
Sbjct: 823 IAKDVEGKTPEEVIEY 838
>UNIPROTKB|E2QWV6 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AAEX03014584 EMBL:AAEX03014585
EMBL:AAEX03014586 Ensembl:ENSCAFT00000010370 Uniprot:E2QWV6
Length = 3002
Score = 493 (178.6 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 125/416 (30%), Positives = 213/416 (51%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
++G T+D A EA + V A ++ G L++YQ GL+W+ LY
Sbjct: 1005 SIGNPHTKDIAEVTAVAEALLPKGSARVSPTVKLTAPSLLYGVLRDYQKIGLDWLAKLYR 1064
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NLNGILADE GLGKTVQ IA +L + N GP+LV+V + W LE ++W P
Sbjct: 1065 KNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRGCNILKWELELKRWCPGLK 1124
Query: 623 VVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
+ Y GS +A Q + + FNV + Y+ + + +++W+C++IDE R++
Sbjct: 1125 TLLYVGSHRELKAKRQEWTEPNSFNVCIAPYKQFFRGYASFMRVRWRCLVIDEMQRVRGM 1184
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
+ + + T S R+LL PL N ELW +++FL+P I + + + P
Sbjct: 1185 TERHWEAVFTL-RSQQRLLLIDAPLHNTFLELWTMVHFLIPGISRP------YLHLPLKA 1237
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
++ N++ ++ RLH+V +PF+LRR K++VE QL +K E+++KC +S QK LY+
Sbjct: 1238 PNDE---NQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSSRQKALYE 1294
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNI--EEKYC----QHI 855
++L G+++ G + + +++L+++CNHP + + E Y Q+
Sbjct: 1295 D-----VILQPGTQEALKS-GHFVDVLSILLRLQRICNHPGLVEPRLPESSYTAGPLQYC 1348
Query: 856 GQNNTVVSGPDIYRTSGK---FELLDRILPKFKETKHRVLMFCQMTQLMTILEDYF 908
+ ++ D R S K + D I + K T+H + C+ ++E+ F
Sbjct: 1349 SAS-LILKALD--RDSWKETDLSIFDLISLENKMTRHEAELLCKKKVTRKLMEELF 1401
Score = 263 (97.6 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1770 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1829
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+R FN + + F +LST + G++L AD V+ +D+D NP D +AQ+ RIG++ +
Sbjct: 1830 MRSFNR-DRRIFCAILSTHSRATGVSLVEADAVVFYDNDLNPVMDAKAQEWCERIGRRKD 1888
Query: 991 VRVLRLITVNSVEERIL 1007
V + RL++ NS+EE++L
Sbjct: 1889 VHIYRLVSGNSIEEKLL 1905
Score = 263 (97.6 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1770 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1829
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+R FN + + F +LST + G++L AD V+ +D+D NP D +AQ+ RIG++ +
Sbjct: 1830 MRSFNR-DRRIFCAILSTHSRATGVSLVEADAVVFYDNDLNPVMDAKAQEWCERIGRRKD 1888
Query: 288 VRVLRLITVNSVEERIL 304
V + RL++ NS+EE++L
Sbjct: 1889 VHIYRLVSGNSIEEKLL 1905
Score = 208 (78.3 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 58/213 (27%), Positives = 109/213 (51%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 61
PL N ELW +++FL+P I + + + P ++ N++ ++ RLH+V
Sbjct: 1207 PLHNTFLELWTMVHFLIPGISRP------YLHLPLKAPNDE---NQDYYHKVVIRLHRVT 1257
Query: 62 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 121
+PF+LRR K++VE QL +K E+++KC +S QK LY+ ++L G+++ G
Sbjct: 1258 QPFILRRTKRDVEKQLTKKYEHVLKCRLSSRQKALYED-----VILQPGTQEALKS-GHF 1311
Query: 122 RALKNTIVQLRKLCNHPFMFQNI--EEKYC----QHIGQNNTVVSGPDIYRTSGK---FE 172
+ + +++L+++CNHP + + E Y Q+ + ++ D R S K
Sbjct: 1312 VDVLSILLRLQRICNHPGLVEPRLPESSYTAGPLQYCSAS-LILKALD--RDSWKETDLS 1368
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYF 205
+ D I + K T+H + C+ ++E+ F
Sbjct: 1369 IFDLISLENKMTRHEAELLCKKKVTRKLMEELF 1401
>UNIPROTKB|I3L7Y4 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:CU469318 EMBL:CU469455
Ensembl:ENSSSCT00000027939 Uniprot:I3L7Y4
Length = 2789
Score = 496 (179.7 bits), Expect = 3.8e-64, Sum P(2) = 3.8e-64
Identities = 113/339 (33%), Positives = 183/339 (53%)
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
VG+ T+D A EA + V A ++ G L++YQ GL+W+ LY
Sbjct: 1039 VGKPHTKDIAEVTAVAEAVLPKGSARISTGVKLTAPALLYGALRDYQKIGLDWLAKLYRK 1098
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADE GLGKTVQ IA +L + N GP+LVIV + W LE ++W P
Sbjct: 1099 NLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVIVRSCNILKWELELKRWCPGLKT 1158
Query: 624 VAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
+ Y GS +A + + FN+ +T+Y+ + + + +WKC++IDE R+K
Sbjct: 1159 LLYVGSHRELKAKRQEWSEPNSFNICITSYKQFFRGHASFPRARWKCLVIDEMQRVKGMT 1218
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
+ + + S R+LL PL N ELW +++FL+P I + + + P
Sbjct: 1219 ERHWEAVFAL-QSQQRLLLIDAPLHNTFLELWTMVHFLIPGISRP------YLHFPLKAP 1271
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
E+ N++ ++ RLH+V +PF+LRR K++VE QL +K E+++KC +S QK LY+
Sbjct: 1272 SEE---NQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYED 1328
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 841
++L G+++ G + + +++L+++CNHP
Sbjct: 1329 -----VILQPGTQEALKS-GHFVDVLSILLRLQRICNHP 1361
Score = 259 (96.2 bits), Expect = 3.8e-64, Sum P(2) = 3.8e-64
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK E L +L K + RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1810 SGKLEALAVLLQKLRSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1869
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+R FN + + F LLST + G++L AD V+ +D+D NP D +AQ+ RIG++ +
Sbjct: 1870 MRSFNR-DRRIFCALLSTHSRTTGVSLVEADAVVFYDNDLNPVMDAKAQEWCDRIGRRRD 1928
Query: 991 VRVLRLITVNSVEERIL 1007
V + RL++ NS+EE++L
Sbjct: 1929 VHIYRLVSGNSIEEKLL 1945
Score = 259 (96.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK E L +L K + RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1810 SGKLEALAVLLQKLRSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1869
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+R FN + + F LLST + G++L AD V+ +D+D NP D +AQ+ RIG++ +
Sbjct: 1870 MRSFNR-DRRIFCALLSTHSRTTGVSLVEADAVVFYDNDLNPVMDAKAQEWCDRIGRRRD 1928
Query: 288 VRVLRLITVNSVEERIL 304
V + RL++ NS+EE++L
Sbjct: 1929 VHIYRLVSGNSIEEKLL 1945
Score = 206 (77.6 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 57/199 (28%), Positives = 106/199 (53%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 61
PL N ELW +++FL+P I + + + P E+ N++ ++ RLH+V
Sbjct: 1240 PLHNTFLELWTMVHFLIPGISRP------YLHFPLKAPSEE---NQDYYHKVVIRLHRVT 1290
Query: 62 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 121
+PF+LRR K++VE QL +K E+++KC +S QK LY+ ++L G+++ G
Sbjct: 1291 QPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYED-----VILQPGTQEALKS-GHF 1344
Query: 122 RALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKF-ELLDRILPK 180
+ + +++L+++CNHP + +E + + ++ +GP YR++ + LDR
Sbjct: 1345 VDVLSILLRLQRICNHPGL---VEPRLPE-----SSYTAGPLQYRSASLILKALDRDF-- 1394
Query: 181 FKETKHRVLMFCQMTQLMT 199
+KET + + MT
Sbjct: 1395 WKETDLSIFDLIGLENKMT 1413
>UNIPROTKB|F6XHF3 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
Ensembl:ENSCAFT00000026363 EMBL:AAEX03004382 EMBL:AAEX03004383
EMBL:AAEX03004384 EMBL:AAEX03004387 EMBL:AAEX03004388
Uniprot:F6XHF3
Length = 1823
Score = 698 (250.8 bits), Expect = 4.0e-64, Sum P(2) = 4.0e-64
Identities = 144/348 (41%), Positives = 222/348 (63%)
Query: 500 PSKAVGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWM 557
P+ +G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+
Sbjct: 580 PTATLGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWL 635
Query: 558 VSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKW 617
V++Y LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W
Sbjct: 636 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 695
Query: 618 APSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGH 676
PS ++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE
Sbjct: 696 CPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ 755
Query: 677 RMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
+KN + Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+
Sbjct: 756 NIKNFKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFS 814
Query: 737 APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
P TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q
Sbjct: 815 NPL--TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQ 871
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ LY + + K G ++ N ++QLRK+CNHP +F
Sbjct: 872 RCLYDDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 913
Score = 301 (111.0 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 782 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 838
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 839 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 892
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 893 FMSVINILMQLRKVCNHPNLF 913
Score = 40 (19.1 bits), Expect = 4.0e-64, Sum P(2) = 4.0e-64
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 230 DLHLDFIVGQTEKYSDLLSQ 249
>UNIPROTKB|E2R6G6 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 Ensembl:ENSCAFT00000026363
Uniprot:E2R6G6
Length = 1825
Score = 698 (250.8 bits), Expect = 4.0e-64, Sum P(2) = 4.0e-64
Identities = 144/348 (41%), Positives = 222/348 (63%)
Query: 500 PSKAVGEKKTEDDEYKDAGE--EATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWM 557
P+ +G KK E + A E + Y++A T +V +++ G+L+EYQ GL+W+
Sbjct: 580 PTATLGPKK-EITDIAAAAESLQPKGYTLATT---QVKTPIPLLLRGQLREYQHIGLDWL 635
Query: 558 VSLYNNNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKW 617
V++Y LNGILADEMGLGKT+QTI+LL +L +K N GP+L+IVP S + NW +E ++W
Sbjct: 636 VTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRW 695
Query: 618 APSANVVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGH 676
PS ++ Y G+ R+ QG K + F+V +T+Y+ +++D + W+ +I+DE
Sbjct: 696 CPSFKILTYYGAQKERKLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ 755
Query: 677 RMKNHHCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFN 736
+KN + Q+L F NS R+LLTGTPLQN L ELW+L++FL+P +F+S F++WF+
Sbjct: 756 NIKNFKSQRWQSLLNF-NSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFS 814
Query: 737 APFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQ 796
P TG +E ++E +++RLHKVLRPFLLRR+K +VE Q+P+K E++I+C +S Q
Sbjct: 815 NPL--TG-MIEGSQEYNEGLVKRLHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQ 871
Query: 797 KLLYQHLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMF 844
+ LY + + K G ++ N ++QLRK+CNHP +F
Sbjct: 872 RCLYDDF------MAQTTTKETLATGHFMSVINILMQLRKVCNHPNLF 913
Score = 301 (111.0 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/141 (43%), Positives = 93/141 (65%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P +F+S F++WF+ P TG +E ++E +++RLHKV
Sbjct: 782 TPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPL--TG-MIEGSQEYNEGLVKRLHKV 838
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE Q+P+K E++I+C +S Q+ LY + + K G
Sbjct: 839 LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDF------MAQTTTKETLATGH 892
Query: 121 ARALKNTIVQLRKLCNHPFMF 141
++ N ++QLRK+CNHP +F
Sbjct: 893 FMSVINILMQLRKVCNHPNLF 913
Score = 40 (19.1 bits), Expect = 4.0e-64, Sum P(2) = 4.0e-64
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 376 DKRLAFLLSQTDEYISNLTQ 395
D L F++ QT++Y L+Q
Sbjct: 230 DLHLDFIVGQTEKYSDLLSQ 249
>UNIPROTKB|I3LPX4 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:CU469318
EMBL:CU469455 Ensembl:ENSSSCT00000024610 Uniprot:I3LPX4
Length = 2865
Score = 496 (179.7 bits), Expect = 4.1e-64, Sum P(2) = 4.1e-64
Identities = 113/339 (33%), Positives = 183/339 (53%)
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNN 563
VG+ T+D A EA + V A ++ G L++YQ GL+W+ LY
Sbjct: 1042 VGKPHTKDIAEVTAVAEAVLPKGSARISTGVKLTAPALLYGALRDYQKIGLDWLAKLYRK 1101
Query: 564 NLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANV 623
NLNGILADE GLGKTVQ IA +L + N GP+LVIV + W LE ++W P
Sbjct: 1102 NLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVIVRSCNILKWELELKRWCPGLKT 1161
Query: 624 VAYKGSPLARRALQGRMKN-SKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHH 682
+ Y GS +A + + FN+ +T+Y+ + + + +WKC++IDE R+K
Sbjct: 1162 LLYVGSHRELKAKRQEWSEPNSFNICITSYKQFFRGHASFPRARWKCLVIDEMQRVKGMT 1221
Query: 683 CKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATT 742
+ + + S R+LL PL N ELW +++FL+P I + + + P
Sbjct: 1222 ERHWEAVFAL-QSQQRLLLIDAPLHNTFLELWTMVHFLIPGISRP------YLHFPLKAP 1274
Query: 743 GEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQH 802
E+ N++ ++ RLH+V +PF+LRR K++VE QL +K E+++KC +S QK LY+
Sbjct: 1275 SEE---NQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYED 1331
Query: 803 LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHP 841
++L G+++ G + + +++L+++CNHP
Sbjct: 1332 -----VILQPGTQEALKS-GHFVDVLSILLRLQRICNHP 1364
Score = 259 (96.2 bits), Expect = 4.1e-64, Sum P(2) = 4.1e-64
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK E L +L K + RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1886 SGKLEALAVLLQKLRSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1945
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+R FN + + F LLST + G++L AD V+ +D+D NP D +AQ+ RIG++ +
Sbjct: 1946 MRSFNR-DRRIFCALLSTHSRTTGVSLVEADAVVFYDNDLNPVMDAKAQEWCDRIGRRRD 2004
Query: 991 VRVLRLITVNSVEERIL 1007
V + RL++ NS+EE++L
Sbjct: 2005 VHIYRLVSGNSIEEKLL 2021
Score = 259 (96.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK E L +L K + RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1886 SGKLEALAVLLQKLRSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1945
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+R FN + + F LLST + G++L AD V+ +D+D NP D +AQ+ RIG++ +
Sbjct: 1946 MRSFNR-DRRIFCALLSTHSRTTGVSLVEADAVVFYDNDLNPVMDAKAQEWCDRIGRRRD 2004
Query: 288 VRVLRLITVNSVEERIL 304
V + RL++ NS+EE++L
Sbjct: 2005 VHIYRLVSGNSIEEKLL 2021
Score = 206 (77.6 bits), Expect = 5.3e-33, Sum P(2) = 5.3e-33
Identities = 57/199 (28%), Positives = 106/199 (53%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 61
PL N ELW +++FL+P I + + + P E+ N++ ++ RLH+V
Sbjct: 1243 PLHNTFLELWTMVHFLIPGISRP------YLHFPLKAPSEE---NQDYYHKVVIRLHRVT 1293
Query: 62 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 121
+PF+LRR K++VE QL +K E+++KC +S QK LY+ ++L G+++ G
Sbjct: 1294 QPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYED-----VILQPGTQEALKS-GHF 1347
Query: 122 RALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKF-ELLDRILPK 180
+ + +++L+++CNHP + +E + + ++ +GP YR++ + LDR
Sbjct: 1348 VDVLSILLRLQRICNHPGL---VEPRLPE-----SSYTAGPLQYRSASLILKALDRDF-- 1397
Query: 181 FKETKHRVLMFCQMTQLMT 199
+KET + + MT
Sbjct: 1398 WKETDLSIFDLIGLENKMT 1416
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 558 (201.5 bits), Expect = 6.9e-64, Sum P(3) = 6.9e-64
Identities = 110/266 (41%), Positives = 169/266 (63%)
Query: 757 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSE 815
+ L +L+P+LLRR+K+ VE + K E I++ +++ +QK Y+ ++ + L G
Sbjct: 724 VESLQAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKG-- 781
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
GK+ +G + L N +++LRK CNHP++ + +E+ I + + + + SGK
Sbjct: 782 -GKSNQGPS--LLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIFQ--KLIQASGKLV 836
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
L+D++LPK K H+VL+F QM ++ IL+DY +R + + R+DG+ K DR + +F+
Sbjct: 837 LIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFS 896
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
+P+S F+FLL TRAGG+G+NL AADTVIIFDSDWNP DLQAQ R HRIGQ V+V R
Sbjct: 897 KPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYR 956
Query: 996 LITVNSVEERILAAARYKLNMDEKVI 1021
L+T N+ E + A KL +D V+
Sbjct: 957 LVTKNTYERLMFDKASKKLGLDRAVL 982
Score = 554 (200.1 bits), Expect = 2.3e-49, P = 2.3e-49
Identities = 110/271 (40%), Positives = 170/271 (62%)
Query: 54 IRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSE 112
+ L +L+P+LLRR+K+ VE + K E I++ +++ +QK Y+ ++ + L G
Sbjct: 724 VESLQAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKG-- 781
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
GK+ +G + L N +++LRK CNHP++ + +E+ I + + + + SGK
Sbjct: 782 -GKSNQGPS--LLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIFQ--KLIQASGKLV 836
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
L+D++LPK K H+VL+F QM ++ IL+DY +R + + R+DG+ K DR + +F+
Sbjct: 837 LIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFS 896
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
+P+S F+FLL TRAGG+G+NL AADTVIIFDSDWNP DLQAQ R HRIGQ V+V R
Sbjct: 897 KPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYR 956
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNT 323
L+T N+ E + A KL +D + N+
Sbjct: 957 LVTKNTYERLMFDKASKKLGLDRAVLTKMNS 987
Score = 328 (120.5 bits), Expect = 9.2e-39, Sum P(3) = 9.2e-39
Identities = 75/183 (40%), Positives = 110/183 (60%)
Query: 641 KNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVL 700
K +KFNVL+TTYE I D++ LS+I WK ++IDE HR+KN CKLT L + Y+ H +L
Sbjct: 622 KITKFNVLITTYEMAITDRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRS-YSFDHLLL 680
Query: 701 LTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRL 760
LTGTPLQN ELW+LLNFL P F + F G+ E ++ E+ L
Sbjct: 681 LTGTPLQNNTQELWSLLNFLDPKQFSNLDQF-------LLEYGDLKESSQVES------L 727
Query: 761 HKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKT 819
+L+P+LLRR+K+ VE + K E I++ +++ +QK Y+ ++ + L G GK+
Sbjct: 728 QAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKG---GKS 784
Query: 820 GEG 822
+G
Sbjct: 785 NQG 787
Score = 205 (77.2 bits), Expect = 6.9e-64, Sum P(3) = 6.9e-64
Identities = 41/106 (38%), Positives = 61/106 (57%)
Query: 529 TYHEKVTEQASIMVNG-KLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLTY 587
T +K+ + G KL+ YQ++GL W+ ++ N IL DEMGLGKTVQ++++L
Sbjct: 491 TAWKKIDQSPDYFTKGNKLRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQSVSILET 550
Query: 588 LMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLAR 633
L + GP+LV+ PL+T+ +W EFE W N + Y S R
Sbjct: 551 LRKVHGIRGPFLVVAPLTTIPHWKREFENWT-DMNALVYHDSGAGR 595
Score = 150 (57.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/120 (33%), Positives = 64/120 (53%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN ELW+LLNFL P F + F G+ E ++ E+ L +
Sbjct: 684 TPLQNNTQELWSLLNFLDPKQFSNLDQF-------LLEYGDLKESSQVES------LQAI 730
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGI-LLTDGSEKGKTGEG 119
L+P+LLRR+K+ VE + K E I++ +++ +QK Y+ ++ + L G GK+ +G
Sbjct: 731 LKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKG---GKSNQG 787
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 576 GKTVQTIALLTYLMEKKKNLG-PYL 599
GK+ Q +LL +ME +K PYL
Sbjct: 782 GKSNQGPSLLNIMMELRKCCNHPYL 806
Score = 37 (18.1 bits), Expect = 6.9e-64, Sum P(3) = 6.9e-64
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 200 ILEDYFIWRDFSYL 213
ILE W+D SY+
Sbjct: 355 ILEVLVKWKDLSYI 368
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 661 (237.7 bits), Expect = 1.6e-63, Sum P(3) = 1.6e-63
Identities = 140/347 (40%), Positives = 206/347 (59%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
+ G+ + E ++ E + S A + + + S + GKL++YQ++GL W++SLY
Sbjct: 120 SAGDNRHRRTEQEEDEELLSENSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYE 179
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
N +NGILADEMGLGKT+QTI+LL Y+ + GP++V+VP STL NW+ EF++W PS
Sbjct: 180 NGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLK 239
Query: 623 VVAYKGSPLARRA-LQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
V G R A ++ + +++V +T+YE +I +++V K W+ ++IDE HR+KN
Sbjct: 240 AVCLIGDREERTAFIRDTLLPGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNE 299
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
KL++ + F +++R+LLTGTPLQN L ELWALLNFLLP +F S F+ WF+
Sbjct: 300 KSKLSEIVREF-KTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCL 358
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
K ++ RLH VLRPFLLRR+K +VE L K E I +S +Q+ Y
Sbjct: 359 GDTK----------LVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYT 408
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIE 848
IL+ D G+ L N ++QLRK CNHP++F E
Sbjct: 409 K-----ILMKDIDILNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAE 450
Score = 624 (224.7 bits), Expect = 2.4e-57, Sum P(2) = 2.4e-57
Identities = 139/290 (47%), Positives = 176/290 (60%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++ RLH VLRPFLLRR+K +VE L K E I +S +Q+ Y IL+ D
Sbjct: 363 LVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTK-----ILMKDIDI 417
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 418 LNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEP------GPPYT--TDLHLVVNSGKMV 469
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T E+R + FN
Sbjct: 470 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFN 529
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
EP S F+F+LSTRAGGLG+NL AD VII+DSDWNP DLQA DRAHRIGQK +VRV R
Sbjct: 530 EPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFR 589
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAG-MFDQKSTGSERHEFLQTILH 1044
IT N+VEERI+ A KL +D VIQ G + D + E L I H
Sbjct: 590 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDPSMNKLGKDEMLSIIRH 639
Score = 600 (216.3 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 130/262 (49%), Positives = 165/262 (62%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++ RLH VLRPFLLRR+K +VE L K E I +S +Q+ Y IL+ D
Sbjct: 363 LVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTK-----ILMKDIDI 417
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G+ L N ++QLRK CNHP++F E G T + + SGK
Sbjct: 418 LNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEP------GPPYT--TDLHLVVNSGKMV 469
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
+LD++LPK KE RVL+F QMT+++ ILEDY +WR++ Y RLDG T E+R + FN
Sbjct: 470 VLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFN 529
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
EP S F+F+LSTRAGGLG+NL AD VII+DSDWNP DLQA DRAHRIGQK +VRV R
Sbjct: 530 EPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFR 589
Query: 293 LITVNSVEERILAAARYKLNMD 314
IT N+VEERI+ A KL +D
Sbjct: 590 FITDNTVEERIVERAEMKLRLD 611
Score = 254 (94.5 bits), Expect = 6.7e-18, Sum P(2) = 6.7e-18
Identities = 61/145 (42%), Positives = 77/145 (53%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S F+ WF+ K ++ RLH V
Sbjct: 321 TPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDTK----------LVERLHTV 370
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPFLLRR+K +VE L K E I +S +Q+ Y IL+ D G+
Sbjct: 371 LRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTK-----ILMKDIDILNSAGKMD 425
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIE 145
L N ++QLRK CNHP++F E
Sbjct: 426 KMRLLNVLMQLRKCCNHPYLFDGAE 450
Score = 56 (24.8 bits), Expect = 1.6e-63, Sum P(3) = 1.6e-63
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 970 WNPHQDLQAQDRAHRIGQKNEVRVLRLITVN-SVEERILAAARYKLNMDEKVIQAGMFDQ 1028
W +LQ ++ ++ E R+ R I++ +++ +I RYK + I G
Sbjct: 870 WERCNELQDIEKIMAQIERGEARIQRRISIKKALDSKI---GRYKAPFHQLRISYGTNKG 926
Query: 1029 KSTGSERHEFLQTILHQ 1045
K+ E FL +LH+
Sbjct: 927 KNYTEEEDRFLICMLHK 943
Score = 42 (19.8 bits), Expect = 1.6e-63, Sum P(3) = 1.6e-63
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 366 GYRKLIDQKKDKRLAFLLSQTDEY 389
GY + + + R +LL QT+ +
Sbjct: 62 GYEEKVQTDRTNRFEYLLKQTEVF 85
Score = 42 (19.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 769 LRRLKKEVESQLPEKV-EYII----KC-DMSGLQKLLYQ 801
+ + +EVE + PE+V EY +C ++ ++K++ Q
Sbjct: 847 IENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQ 885
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 691 (248.3 bits), Expect = 2.1e-63, Sum P(2) = 2.1e-63
Identities = 145/336 (43%), Positives = 208/336 (61%)
Query: 513 EYKDAGEEATYYSI-AHTYHE-KVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILA 570
E + EEA + +T +V ++ G+L+EYQ+ GL+WMV+LY NLNGILA
Sbjct: 523 ELANIAEEALKFQPKGYTLETTQVKTPVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILA 582
Query: 571 DEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSP 630
DEMGLGKT+QTI+LL ++ + GP+L++VP S + NW +EF+KW P+ ++ Y G+
Sbjct: 583 DEMGLGKTIQTISLLAHMACSESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFGTA 642
Query: 631 LAR-RALQGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTL 689
R +G MK + F+V +T+Y+ + +D + W+ +I+DE +KN + Q L
Sbjct: 643 KERAEKRKGWMKPNCFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQAL 702
Query: 690 NTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELN 749
+ R+LLTGTPLQN L ELW+L++FL+P+IF S F+ WF+ P TG +E N
Sbjct: 703 LNV-RARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPL--TG-MMEGN 758
Query: 750 EEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGIL 809
E +I RLHKVLRPF+LRRLKKEVE QLPEK E+I+ C +S Q+ LY +R
Sbjct: 759 MEFNAPLIGRLHKVLRPFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRR-- 816
Query: 810 LTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQ 845
S K G ++ N ++QLRK CNHP +F+
Sbjct: 817 ----STKENLKSGNMMSVLNIVMQLRKCCNHPNLFE 848
Score = 357 (130.7 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 99/311 (31%), Positives = 164/311 (52%)
Query: 744 EKVELNEEETILIIRRLHKVLR-PFL----LRRLKKEVESQLPE-KVEY--IIKCDMSGL 795
EK+E + + + I+RR +++R P + + +++E+ ++ P VE +++ +
Sbjct: 1051 EKMEESRKNQLEIVRRRFEMIRAPIIPLEMVALVREEIIAEFPRLAVEEDEVVQERLLEY 1110
Query: 796 QKLLYQH--LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQ 853
+LL Q ++ +L TD + + G ++N + + N + N +
Sbjct: 1111 CELLVQRFGMYVEPVL-TDAWQCRPSSSGLPSYIRNNLSNIE--LNSRSLLLNTSTNFDT 1167
Query: 854 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 910
+ + + P+ I GK + L +L + KHR L+F QM++++ +L+ +
Sbjct: 1168 RMSISRAL-QFPELRLIEYDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSH 1226
Query: 911 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 970
+ Y RLDGTT E R ++ +FN + K F F+LSTR+GG+G+NL ADTVI +DSDW
Sbjct: 1227 HGYQYFRLDGTTGVEQRQAMMERFNA-DPKVFCFILSTRSGGVGVNLTGADTVIFYDSDW 1285
Query: 971 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVI-QAGMFDQ- 1028
NP D QAQDR HRIGQ V + RLI+ ++EE IL A K + E I +AG +
Sbjct: 1286 NPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRLGELAIDEAGFTPEF 1345
Query: 1029 -KSTGSERHEF 1038
K + S R F
Sbjct: 1346 FKQSDSIRDLF 1356
Score = 351 (128.6 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
Identities = 92/288 (31%), Positives = 154/288 (53%)
Query: 41 EKVELNEEETILIIRRLHKVLR-PFL----LRRLKKEVESQLPE-KVEY--IIKCDMSGL 92
EK+E + + + I+RR +++R P + + +++E+ ++ P VE +++ +
Sbjct: 1051 EKMEESRKNQLEIVRRRFEMIRAPIIPLEMVALVREEIIAEFPRLAVEEDEVVQERLLEY 1110
Query: 93 QKLLYQH--LHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQ 150
+LL Q ++ +L TD + + G ++N + + N + N +
Sbjct: 1111 CELLVQRFGMYVEPVL-TDAWQCRPSSSGLPSYIRNNLSNIE--LNSRSLLLNTSTNFDT 1167
Query: 151 HIGQNNTVVSGPD---IYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIW 207
+ + + P+ I GK + L +L + KHR L+F QM++++ +L+ +
Sbjct: 1168 RMSISRAL-QFPELRLIEYDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSH 1226
Query: 208 RDFSYLRLDGTTKSEDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDW 267
+ Y RLDGTT E R ++ +FN + K F F+LSTR+GG+G+NL ADTVI +DSDW
Sbjct: 1227 HGYQYFRLDGTTGVEQRQAMMERFNA-DPKVFCFILSTRSGGVGVNLTGADTVIFYDSDW 1285
Query: 268 NPHQDLQAQDRAHRIGQKNEVRVLRLITVNSVEERILAAARYKLNMDE 315
NP D QAQDR HRIGQ V + RLI+ ++EE IL A K + E
Sbjct: 1286 NPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQKRRLGE 1333
Score = 328 (120.5 bits), Expect = 1.6e-56, Sum P(2) = 1.6e-56
Identities = 70/142 (49%), Positives = 91/142 (64%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELW+L++FL+P+IF S F+ WF+ P TG +E N E +I RLHKV
Sbjct: 716 TPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPL--TG-MMEGNMEFNAPLIGRLHKV 772
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
LRPF+LRRLKKEVE QLPEK E+I+ C +S Q+ LY +R S K G
Sbjct: 773 LRPFILRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRR------STKENLKSGN 826
Query: 121 ARALKNTIVQLRKLCNHPFMFQ 142
++ N ++QLRK CNHP +F+
Sbjct: 827 MMSVLNIVMQLRKCCNHPNLFE 848
Score = 45 (20.9 bits), Expect = 2.1e-63, Sum P(2) = 2.1e-63
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 375 KDKRLAFLLSQTDEYISNLTQ 395
++K L F++ Q DE +SN+ Q
Sbjct: 332 RNKHLMFVIGQVDE-MSNIVQ 351
Score = 43 (20.2 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 763 VLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQK 797
+ RP + R L++ V++Q P V ++ G+Q+
Sbjct: 2301 IRRPLVGRPLQRGVDNQAPT-VAQVVVAPPQGMQQ 2334
>UNIPROTKB|L7N089 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] GeneTree:ENSGT00530000063427 EMBL:AAEX03014584
Ensembl:ENSCAFT00000010365 Uniprot:L7N089
Length = 3110
Score = 493 (178.6 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 125/416 (30%), Positives = 213/416 (51%)
Query: 503 AVGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYN 562
++G T+D A EA + V A ++ G L++YQ GL+W+ LY
Sbjct: 1041 SIGNPHTKDIAEVTAVAEALLPKGSARVSPTVKLTAPSLLYGVLRDYQKIGLDWLAKLYR 1100
Query: 563 NNLNGILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSAN 622
NLNGILADE GLGKTVQ IA +L + N GP+LV+V + W LE ++W P
Sbjct: 1101 KNLNGILADEAGLGKTVQIIAFFAHLACNEGNWGPHLVVVRGCNILKWELELKRWCPGLK 1160
Query: 623 VVAYKGSPLARRAL-QGRMKNSKFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNH 681
+ Y GS +A Q + + FNV + Y+ + + +++W+C++IDE R++
Sbjct: 1161 TLLYVGSHRELKAKRQEWTEPNSFNVCIAPYKQFFRGYASFMRVRWRCLVIDEMQRVRGM 1220
Query: 682 HCKLTQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFAT 741
+ + + T S R+LL PL N ELW +++FL+P I + + + P
Sbjct: 1221 TERHWEAVFTL-RSQQRLLLIDAPLHNTFLELWTMVHFLIPGISRP------YLHLPLKA 1273
Query: 742 TGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQ 801
++ N++ ++ RLH+V +PF+LRR K++VE QL +K E+++KC +S QK LY+
Sbjct: 1274 PNDE---NQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSSRQKALYE 1330
Query: 802 HLHNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNI--EEKYC----QHI 855
++L G+++ G + + +++L+++CNHP + + E Y Q+
Sbjct: 1331 D-----VILQPGTQEALKS-GHFVDVLSILLRLQRICNHPGLVEPRLPESSYTAGPLQYC 1384
Query: 856 GQNNTVVSGPDIYRTSGK---FELLDRILPKFKETKHRVLMFCQMTQLMTILEDYF 908
+ ++ D R S K + D I + K T+H + C+ ++E+ F
Sbjct: 1385 SAS-LILKALD--RDSWKETDLSIFDLISLENKMTRHEAELLCKKKVTRKLMEELF 1437
Score = 263 (97.6 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 871 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 930
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1879 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1938
Query: 931 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 990
+R FN + + F +LST + G++L AD V+ +D+D NP D +AQ+ RIG++ +
Sbjct: 1939 MRSFNR-DRRIFCAILSTHSRATGVSLVEADAVVFYDNDLNPVMDAKAQEWCERIGRRKD 1997
Query: 991 VRVLRLITVNSVEERIL 1007
V + RL++ NS+EE++L
Sbjct: 1998 VHIYRLVSGNSIEEKLL 2014
Score = 263 (97.6 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 168 SGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGEL 227
SGK E L +L K K RVL+ QM ++ ILE + + +Y+R+D SE R EL
Sbjct: 1879 SGKLEALAILLQKLKSEGRRVLILSQMVLMLDILEMFLNFHYLTYIRIDENANSEQRQEL 1938
Query: 228 LRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNE 287
+R FN + + F +LST + G++L AD V+ +D+D NP D +AQ+ RIG++ +
Sbjct: 1939 MRSFNR-DRRIFCAILSTHSRATGVSLVEADAVVFYDNDLNPVMDAKAQEWCERIGRRKD 1997
Query: 288 VRVLRLITVNSVEERIL 304
V + RL++ NS+EE++L
Sbjct: 1998 VHIYRLVSGNSIEEKLL 2014
Score = 208 (78.3 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 58/213 (27%), Positives = 109/213 (51%)
Query: 2 PLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVL 61
PL N ELW +++FL+P I + + + P ++ N++ ++ RLH+V
Sbjct: 1243 PLHNTFLELWTMVHFLIPGISRP------YLHLPLKAPNDE---NQDYYHKVVIRLHRVT 1293
Query: 62 RPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGA 121
+PF+LRR K++VE QL +K E+++KC +S QK LY+ ++L G+++ G
Sbjct: 1294 QPFILRRTKRDVEKQLTKKYEHVLKCRLSSRQKALYED-----VILQPGTQEALKS-GHF 1347
Query: 122 RALKNTIVQLRKLCNHPFMFQNI--EEKYC----QHIGQNNTVVSGPDIYRTSGK---FE 172
+ + +++L+++CNHP + + E Y Q+ + ++ D R S K
Sbjct: 1348 VDVLSILLRLQRICNHPGLVEPRLPESSYTAGPLQYCSAS-LILKALD--RDSWKETDLS 1404
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYF 205
+ D I + K T+H + C+ ++E+ F
Sbjct: 1405 IFDLISLENKMTRHEAELLCKKKVTRKLMEELF 1437
Score = 41 (19.5 bits), Expect = 1.0e-62, Sum P(3) = 1.0e-62
Identities = 29/118 (24%), Positives = 44/118 (37%)
Query: 41 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 100
E+ E EEE +I + +R L R+ + +QLP V LQ+ Q L
Sbjct: 427 EEEEEEEEEKSEVI---NDEVRNSTLIRVPCYIATQLPPNVSAAFSSQQQPLQQ---QAL 480
Query: 101 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTV 158
G L+ G+T + R T + + P + + QH G N V
Sbjct: 481 --TGALVAGAGSAGET-DPFKRQQAGTPAAILEQSKRPRLEVGHQGAVFQHPGANTGV 535
Score = 41 (19.5 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 29/118 (24%), Positives = 44/118 (37%)
Query: 744 EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHL 803
E+ E EEE +I + +R L R+ + +QLP V LQ+ Q L
Sbjct: 427 EEEEEEEEEKSEVI---NDEVRNSTLIRVPCYIATQLPPNVSAAFSSQQQPLQQ---QAL 480
Query: 804 HNRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTV 861
G L+ G+T + R T + + P + + QH G N V
Sbjct: 481 --TGALVAGAGSAGET-DPFKRQQAGTPAAILEQSKRPRLEVGHQGAVFQHPGANTGV 535
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 668 (240.2 bits), Expect = 3.1e-62, P = 3.1e-62
Identities = 141/323 (43%), Positives = 192/323 (59%)
Query: 527 AHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLT 586
A+ E + + + +NG +K YQ++GL W+ LY +NGILADEMGLGKT+QTI+LL
Sbjct: 303 ANEEDEAIILKQPMNINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLC 362
Query: 587 YLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFN 646
YL K ++I P STL NW E +KW Y G+ R+ L + +S F+
Sbjct: 363 YLRFNKNIKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLHSDFD 422
Query: 647 VLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPL 706
VLLTTYE +IKDKS L I W ++IDE HR+KN L+ ++ F S +R+L+TGTPL
Sbjct: 423 VLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVR-FLRSENRLLITGTPL 481
Query: 707 QNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRP 766
N L ELW+LLNFL+P IF + F+ FN K+ N+ + II +LH +L+P
Sbjct: 482 HNNLKELWSLLNFLMPKIFDNSEEFDNLFNI------SKISTNDNKQSEIITQLHTILKP 535
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
F+LRRLK EVE LP K E I MS LQK LY + ++ I + + G
Sbjct: 536 FMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMT------GSKNQ 589
Query: 827 LKNTIVQLRKLCNHPFMFQNIEE 849
+ N ++QLRK CNHP++F IEE
Sbjct: 590 MLNILMQLRKCCNHPYLFDGIEE 612
Score = 667 (239.9 bits), Expect = 4.0e-62, P = 4.0e-62
Identities = 138/300 (46%), Positives = 188/300 (62%)
Query: 745 KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLH 804
K+ N+ + II +LH +L+PF+LRRLK EVE LP K E I MS LQK LY +
Sbjct: 514 KISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDIL 573
Query: 805 NRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSG 864
++ I + + G + N ++QLRK CNHP++F IEE + G
Sbjct: 574 SKNIDVLNAMT------GSKNQMLNILMQLRKCCNHPYLFDGIEEP---------PYIEG 618
Query: 865 PDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKS 924
+ TSGK LLD++LP+ K+ RVL+F QMT+L+ I++DY W+++ YLR+DG+T
Sbjct: 619 NHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPG 678
Query: 925 EDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHR 984
++R + +FNEP SKYFIFLLSTRAGG+G+NL AD VI+FDSD+NP D+QA DRAHR
Sbjct: 679 DERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHR 738
Query: 985 IGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILH 1044
IGQK V V R +T NSVEE+I+ A KL +D +IQ G + S + L IL+
Sbjct: 739 IGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSAKENNKQELHDILN 798
Score = 642 (231.1 bits), Expect = 9.9e-59, Sum P(2) = 9.9e-59
Identities = 131/273 (47%), Positives = 177/273 (64%)
Query: 42 KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLH 101
K+ N+ + II +LH +L+PF+LRRLK EVE LP K E I MS LQK LY +
Sbjct: 514 KISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDIL 573
Query: 102 NRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSG 161
++ I + + G + N ++QLRK CNHP++F IEE + G
Sbjct: 574 SKNIDVLNAMT------GSKNQMLNILMQLRKCCNHPYLFDGIEEP---------PYIEG 618
Query: 162 PDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKS 221
+ TSGK LLD++LP+ K+ RVL+F QMT+L+ I++DY W+++ YLR+DG+T
Sbjct: 619 NHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPG 678
Query: 222 EDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHR 281
++R + +FNEP SKYFIFLLSTRAGG+G+NL AD VI+FDSD+NP D+QA DRAHR
Sbjct: 679 DERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHR 738
Query: 282 IGQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
IGQK V V R +T NSVEE+I+ A KL +D
Sbjct: 739 IGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLD 771
Score = 283 (104.7 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 63/146 (43%), Positives = 84/146 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPL N L ELW+LLNFL+P IF + F+ FN K+ N+ + II +LH +
Sbjct: 479 TPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNI------SKISTNDNKQSEIITQLHTI 532
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PF+LRRLK EVE LP K E I MS LQK LY + ++ I + + G
Sbjct: 533 LKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMT------GS 586
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEE 146
+ N ++QLRK CNHP++F IEE
Sbjct: 587 KNQMLNILMQLRKCCNHPYLFDGIEE 612
Score = 45 (20.9 bits), Expect = 9.9e-59, Sum P(2) = 9.9e-59
Identities = 31/150 (20%), Positives = 63/150 (42%)
Query: 707 QNKLPELWALLNFLLPSIFKS---CSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 763
+N EL +LNF P ++K+ S ++ + A EK + E+ + + + +
Sbjct: 787 ENNKQELHDILNFGAPEVYKTQDISSISDEDIDIILADA-EKRTIEIEKKLKNLENIFDL 845
Query: 764 LRPFLLRRLK--KEVESQLPEKVEYIIKCDMSGL-QKLLYQHLHNRGILLTDGSEKGKTG 820
L L ++E + E E + D SG ++ + + N I+ +G +K K
Sbjct: 846 TNISLDGGLNMYNDLEKEASE--ESTDEEDSSGSGEETILEGSGNNDIVEENGVKKKKKK 903
Query: 821 EGGARALKNTIVQLRKLCNHPFMFQNIEEK 850
+ ++ TI + K F ++ E+
Sbjct: 904 KKNINKIRRTIKKFLKNNKKNMTFLDLGER 933
Score = 42 (19.8 bits), Expect = 8.7e-58, Sum P(3) = 8.7e-58
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 506 EKKTEDDEYKDAGEEATYY 524
E KTE++E + EE YY
Sbjct: 1330 EVKTENEENVLSNEELAYY 1348
Score = 42 (19.8 bits), Expect = 8.7e-58, Sum P(3) = 8.7e-58
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 776 VESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKN 829
VE QL E V+ I K + L Y + R +L + +E+ KT E L N
Sbjct: 1294 VEKQLSEGVDSIEKLQLPS--NLRYDFMEKREVL--NITEEVKT-ENEENVLSN 1342
Score = 39 (18.8 bits), Expect = 8.7e-58, Sum P(3) = 8.7e-58
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 300 EERILAAARYK-LNMDEKEYHRNNTARTQKLNKAIINYHINA 340
EE +L + +N ++K+Y R++ T K +IN+
Sbjct: 1045 EEELLKMGTHSDVNSNDKDYKRSSFMSTDYNMKTTYLNNINS 1086
Score = 38 (18.4 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 310 KLNMDEKEYHRNNTARTQKLNKAIINYHIN 339
K+N ++ +++ T + +KL K ++N
Sbjct: 1154 KINNNDTNNNKSTTLKNKKLKKGKQTKNVN 1183
Score = 37 (18.1 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 502 KAVGEKKTEDDEYKDAGEE 520
K E+ T++++ +GEE
Sbjct: 862 KEASEESTDEEDSSGSGEE 880
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 668 (240.2 bits), Expect = 3.1e-62, P = 3.1e-62
Identities = 141/323 (43%), Positives = 192/323 (59%)
Query: 527 AHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTVQTIALLT 586
A+ E + + + +NG +K YQ++GL W+ LY +NGILADEMGLGKT+QTI+LL
Sbjct: 303 ANEEDEAIILKQPMNINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLC 362
Query: 587 YLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAYKGSPLARRALQGRMKNSKFN 646
YL K ++I P STL NW E +KW Y G+ R+ L + +S F+
Sbjct: 363 YLRFNKNIKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLHSDFD 422
Query: 647 VLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKLTQTLNTFYNSSHRVLLTGTPL 706
VLLTTYE +IKDKS L I W ++IDE HR+KN L+ ++ F S +R+L+TGTPL
Sbjct: 423 VLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVR-FLRSENRLLITGTPL 481
Query: 707 QNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLRP 766
N L ELW+LLNFL+P IF + F+ FN K+ N+ + II +LH +L+P
Sbjct: 482 HNNLKELWSLLNFLMPKIFDNSEEFDNLFNI------SKISTNDNKQSEIITQLHTILKP 535
Query: 767 FLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARA 826
F+LRRLK EVE LP K E I MS LQK LY + ++ I + + G
Sbjct: 536 FMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMT------GSKNQ 589
Query: 827 LKNTIVQLRKLCNHPFMFQNIEE 849
+ N ++QLRK CNHP++F IEE
Sbjct: 590 MLNILMQLRKCCNHPYLFDGIEE 612
Score = 667 (239.9 bits), Expect = 4.0e-62, P = 4.0e-62
Identities = 138/300 (46%), Positives = 188/300 (62%)
Query: 745 KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLH 804
K+ N+ + II +LH +L+PF+LRRLK EVE LP K E I MS LQK LY +
Sbjct: 514 KISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDIL 573
Query: 805 NRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSG 864
++ I + + G + N ++QLRK CNHP++F IEE + G
Sbjct: 574 SKNIDVLNAMT------GSKNQMLNILMQLRKCCNHPYLFDGIEEP---------PYIEG 618
Query: 865 PDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKS 924
+ TSGK LLD++LP+ K+ RVL+F QMT+L+ I++DY W+++ YLR+DG+T
Sbjct: 619 NHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPG 678
Query: 925 EDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHR 984
++R + +FNEP SKYFIFLLSTRAGG+G+NL AD VI+FDSD+NP D+QA DRAHR
Sbjct: 679 DERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHR 738
Query: 985 IGQKNEVRVLRLITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILH 1044
IGQK V V R +T NSVEE+I+ A KL +D +IQ G + S + L IL+
Sbjct: 739 IGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSAKENNKQELHDILN 798
Score = 642 (231.1 bits), Expect = 9.9e-59, Sum P(2) = 9.9e-59
Identities = 131/273 (47%), Positives = 177/273 (64%)
Query: 42 KVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLH 101
K+ N+ + II +LH +L+PF+LRRLK EVE LP K E I MS LQK LY +
Sbjct: 514 KISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDIL 573
Query: 102 NRGILLTDGSEKGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSG 161
++ I + + G + N ++QLRK CNHP++F IEE + G
Sbjct: 574 SKNIDVLNAMT------GSKNQMLNILMQLRKCCNHPYLFDGIEEP---------PYIEG 618
Query: 162 PDIYRTSGKFELLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKS 221
+ TSGK LLD++LP+ K+ RVL+F QMT+L+ I++DY W+++ YLR+DG+T
Sbjct: 619 NHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPG 678
Query: 222 EDRGELLRKFNEPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHR 281
++R + +FNEP SKYFIFLLSTRAGG+G+NL AD VI+FDSD+NP D+QA DRAHR
Sbjct: 679 DERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHR 738
Query: 282 IGQKNEVRVLRLITVNSVEERILAAARYKLNMD 314
IGQK V V R +T NSVEE+I+ A KL +D
Sbjct: 739 IGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLD 771
Score = 283 (104.7 bits), Expect = 4.0e-18, Sum P(3) = 4.0e-18
Identities = 63/146 (43%), Positives = 84/146 (57%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPL N L ELW+LLNFL+P IF + F+ FN K+ N+ + II +LH +
Sbjct: 479 TPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNI------SKISTNDNKQSEIITQLHTI 532
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGG 120
L+PF+LRRLK EVE LP K E I MS LQK LY + ++ I + + G
Sbjct: 533 LKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMT------GS 586
Query: 121 ARALKNTIVQLRKLCNHPFMFQNIEE 146
+ N ++QLRK CNHP++F IEE
Sbjct: 587 KNQMLNILMQLRKCCNHPYLFDGIEE 612
Score = 45 (20.9 bits), Expect = 9.9e-59, Sum P(2) = 9.9e-59
Identities = 31/150 (20%), Positives = 63/150 (42%)
Query: 707 QNKLPELWALLNFLLPSIFKS---CSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 763
+N EL +LNF P ++K+ S ++ + A EK + E+ + + + +
Sbjct: 787 ENNKQELHDILNFGAPEVYKTQDISSISDEDIDIILADA-EKRTIEIEKKLKNLENIFDL 845
Query: 764 LRPFLLRRLK--KEVESQLPEKVEYIIKCDMSGL-QKLLYQHLHNRGILLTDGSEKGKTG 820
L L ++E + E E + D SG ++ + + N I+ +G +K K
Sbjct: 846 TNISLDGGLNMYNDLEKEASE--ESTDEEDSSGSGEETILEGSGNNDIVEENGVKKKKKK 903
Query: 821 EGGARALKNTIVQLRKLCNHPFMFQNIEEK 850
+ ++ TI + K F ++ E+
Sbjct: 904 KKNINKIRRTIKKFLKNNKKNMTFLDLGER 933
Score = 42 (19.8 bits), Expect = 8.7e-58, Sum P(3) = 8.7e-58
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 506 EKKTEDDEYKDAGEEATYY 524
E KTE++E + EE YY
Sbjct: 1330 EVKTENEENVLSNEELAYY 1348
Score = 42 (19.8 bits), Expect = 8.7e-58, Sum P(3) = 8.7e-58
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 776 VESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGKTGEGGARALKN 829
VE QL E V+ I K + L Y + R +L + +E+ KT E L N
Sbjct: 1294 VEKQLSEGVDSIEKLQLPS--NLRYDFMEKREVL--NITEEVKT-ENEENVLSN 1342
Score = 39 (18.8 bits), Expect = 8.7e-58, Sum P(3) = 8.7e-58
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 300 EERILAAARYK-LNMDEKEYHRNNTARTQKLNKAIINYHINA 340
EE +L + +N ++K+Y R++ T K +IN+
Sbjct: 1045 EEELLKMGTHSDVNSNDKDYKRSSFMSTDYNMKTTYLNNINS 1086
Score = 38 (18.4 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 310 KLNMDEKEYHRNNTARTQKLNKAIINYHIN 339
K+N ++ +++ T + +KL K ++N
Sbjct: 1154 KINNNDTNNNKSTTLKNKKLKKGKQTKNVN 1183
Score = 37 (18.1 bits), Expect = 1.4e-57, Sum P(3) = 1.4e-57
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 502 KAVGEKKTEDDEYKDAGEE 520
K E+ T++++ +GEE
Sbjct: 862 KEASEESTDEEDSSGSGEE 880
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 663 (238.4 bits), Expect = 3.6e-62, P = 3.6e-62
Identities = 136/313 (43%), Positives = 206/313 (65%)
Query: 507 KKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKEYQIKGLEWMVSLYNNNLN 566
K TE++E ++ +E + +T+ A I GKL++YQ+ GL W++ LY N +N
Sbjct: 157 KLTEEEEDEECLKEEEGGIVGSGGTRLLTQPACIQ--GKLRDYQLAGLNWLIRLYENGIN 214
Query: 567 GILADEMGLGKTVQTIALLTYLMEKKKNLGPYLVIVPLSTLSNWVLEFEKWAPSANVVAY 626
GILADEMGLGKT+QTI+LL YL E + GP++V+ P STL NW+ E ++ P V +
Sbjct: 215 GILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKF 274
Query: 627 KGSPLARRALQGRMKNS-KFNVLLTTYEFIIKDKSVLSKIQWKCMIIDEGHRMKNHHCKL 685
G+P RR ++ + + KF++ +T++E IK+K+ L + W+ +IIDE HR+KN + L
Sbjct: 275 LGNPEERRHIREELLVAGKFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLL 334
Query: 686 TQTLNTFYNSSHRVLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEK 745
++T+ F ++++R+L+TGTPLQN L ELWALLNFLLP +F S TF++WF +GE
Sbjct: 335 SKTMRLF-STNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWFQI----SGE- 388
Query: 746 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHN 805
N+++ + +++LHKVLRPFLLRRLK +VE LP K E I+K MS +QK Y+ L
Sbjct: 389 ---NDQQEV--VQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQ 443
Query: 806 RGILLTDGSEKGK 818
+ + + +G + K
Sbjct: 444 KDLEVVNGGGERK 456
Score = 662 (238.1 bits), Expect = 4.7e-62, P = 4.7e-62
Identities = 148/357 (41%), Positives = 214/357 (59%)
Query: 756 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 815
++++LHKVLRPFLLRRLK +VE LP K E I+K MS +QK Y+ L + + + +G
Sbjct: 394 VVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG- 452
Query: 816 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 875
G + L N +QLRK CNHP++FQ E G T +G + +GK
Sbjct: 453 ------GERKRLLNIAMQLRKCCNHPYLFQGAEP------GPPYT--TGDHLVTNAGKMV 498
Query: 876 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 935
LLD++LPK K+ RVL+F QMT+L+ ILEDY ++R + Y R+DG T ++R + +N
Sbjct: 499 LLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYN 558
Query: 936 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 995
+P S+ F+FLLSTRAGGLG+NL AD VI++DSDWNP DLQAQDRAHRIGQK EV+V R
Sbjct: 559 KPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR 618
Query: 996 LITVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSERHEFLQTILHQXXXXXXXXXX 1055
T N++E +++ A KL +D VIQ G ++ T + + E LQ + +
Sbjct: 619 FCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVN-KDELLQMVRYGAEMVFSSKDS 677
Query: 1056 XXXXT-VNQLIARTEDELTLFQKMDAERRKGETKPRLVEIKELPDWMVKDDDEVENS 1111
++++IA+ E E T ++DA+ +K ++ + D+ DDD + S
Sbjct: 678 TITDEDIDRIIAKGE-EATA--ELDAKMKKFTEDAIQFKMDDSADFYDFDDDNKDES 731
Score = 628 (226.1 bits), Expect = 3.0e-58, P = 3.0e-58
Identities = 130/279 (46%), Positives = 179/279 (64%)
Query: 53 IIRRLHKVLRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSE 112
++++LHKVLRPFLLRRLK +VE LP K E I+K MS +QK Y+ L + + + +G
Sbjct: 394 VVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG- 452
Query: 113 KGKTGEGGARALKNTIVQLRKLCNHPFMFQNIEEKYCQHIGQNNTVVSGPDIYRTSGKFE 172
G + L N +QLRK CNHP++FQ E G T +G + +GK
Sbjct: 453 ------GERKRLLNIAMQLRKCCNHPYLFQGAEP------GPPYT--TGDHLVTNAGKMV 498
Query: 173 LLDRILPKFKETKHRVLMFCQMTQLMTILEDYFIWRDFSYLRLDGTTKSEDRGELLRKFN 232
LLD++LPK K+ RVL+F QMT+L+ ILEDY ++R + Y R+DG T ++R + +N
Sbjct: 499 LLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYN 558
Query: 233 EPESKYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLR 292
+P S+ F+FLLSTRAGGLG+NL AD VI++DSDWNP DLQAQDRAHRIGQK EV+V R
Sbjct: 559 KPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR 618
Query: 293 LITVNSVEERILAAARYKLNMDEKEYHRNNTARTQKLNK 331
T N++E +++ A KL +D + A + +NK
Sbjct: 619 FCTENAIEAKVIERAYKKLALDALVIQQGRLAEQKTVNK 657
Score = 259 (96.2 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 56/115 (48%), Positives = 76/115 (66%)
Query: 1 TPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKV 60
TPLQN L ELWALLNFLLP +F S TF++WF +GE N+++ + +++LHKV
Sbjct: 352 TPLQNNLHELWALLNFLLPEVFSSAETFDEWFQI----SGE----NDQQEV--VQQLHKV 401
Query: 61 LRPFLLRRLKKEVESQLPEKVEYIIKCDMSGLQKLLYQHLHNRGILLTDGSEKGK 115
LRPFLLRRLK +VE LP K E I+K MS +QK Y+ L + + + +G + K
Sbjct: 402 LRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERK 456
Score = 41 (19.5 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 504 VGEKKTEDDEYKDAGEEATYYSIAHTYHEKVTEQASIMVNGKLKE 548
+G+KK E ++ E A + ++K+ A ++ G+L E
Sbjct: 608 IGQKK-EVQVFRFCTENAIEAKVIERAYKKLALDALVIQQGRLAE 651
WARNING: HSPs involving 321 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1281 1071 0.00085 123 3 11 22 0.39 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 571
No. of states in DFA: 628 (67 KB)
Total size of DFA: 492 KB (2224 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 87.55u 0.10s 87.65t Elapsed: 00:00:25
Total cpu time: 87.74u 0.11s 87.85t Elapsed: 00:00:26
Start: Thu Aug 15 13:03:11 2013 End: Thu Aug 15 13:03:37 2013
WARNINGS ISSUED: 2