Query psy7774
Match_columns 173
No_of_seqs 217 out of 1718
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 18:34:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r6j_A Syntenin 1; PDZ, membra 99.8 2E-18 6.8E-23 111.9 10.7 77 89-170 4-80 (82)
2 2ehr_A INAD-like protein; PDZ 99.7 2E-17 6.8E-22 114.0 11.5 87 86-172 12-110 (117)
3 4e34_A Golgi-associated PDZ an 99.7 2.7E-17 9.3E-22 107.4 10.3 82 89-170 2-86 (87)
4 1qav_A Alpha-1 syntrophin (res 99.7 4.9E-17 1.7E-21 106.9 11.4 83 89-171 4-89 (90)
5 3l4f_D SH3 and multiple ankyri 99.7 5.3E-17 1.8E-21 114.4 12.3 85 88-172 26-124 (132)
6 2he4_A Na(+)/H(+) exchange reg 99.7 8.4E-17 2.9E-21 105.8 12.5 83 89-172 4-87 (90)
7 3b76_A E3 ubiquitin-protein li 99.7 4.9E-17 1.7E-21 112.5 10.9 83 89-171 24-112 (118)
8 2iwo_A Multiple PDZ domain pro 99.7 2.3E-17 7.8E-22 114.4 9.2 85 88-172 23-113 (120)
9 1kwa_A Hcask/LIN-2 protein; PD 99.7 5.5E-17 1.9E-21 106.5 10.3 83 90-172 2-85 (88)
10 3gge_A PDZ domain-containing p 99.7 8.2E-17 2.8E-21 106.5 10.6 84 88-172 4-90 (95)
11 3i4w_A Disks large homolog 4; 99.7 1.6E-16 5.4E-21 107.1 12.3 84 87-171 9-94 (104)
12 1g9o_A NHE-RF; PDZ domain, com 99.7 2E-16 6.9E-21 104.1 12.5 82 89-171 3-85 (91)
13 2ego_A General receptor for ph 99.7 1.1E-16 3.8E-21 106.5 10.9 84 88-171 3-95 (96)
14 2qg1_A Multiple PDZ domain pro 99.7 1.3E-16 4.6E-21 105.2 11.1 84 89-172 4-89 (92)
15 3gsl_A Disks large homolog 4; 99.7 3.6E-16 1.2E-20 116.0 14.8 115 1-172 68-190 (196)
16 1m5z_A GRIP, AMPA receptor int 99.7 2.7E-16 9.2E-21 103.5 12.4 84 89-172 6-91 (91)
17 1wi2_A Riken cDNA 2700099C19; 99.7 1.5E-16 5.3E-21 107.4 11.5 84 88-172 14-99 (104)
18 2dc2_A GOPC, golgi associated 99.7 8.2E-17 2.8E-21 108.6 9.9 85 88-172 8-95 (103)
19 2awx_A Synapse associated prot 99.7 1.8E-16 6.2E-21 107.2 11.7 83 89-172 3-93 (105)
20 2fe5_A Presynaptic protein SAP 99.7 2.5E-16 8.6E-21 104.2 12.0 83 89-172 3-93 (94)
21 1ujd_A KIAA0559 protein; PDZ d 99.7 1.5E-16 5.1E-21 109.7 11.2 85 89-173 12-110 (117)
22 1uhp_A Hypothetical protein KI 99.7 1.3E-16 4.5E-21 108.2 10.8 84 88-172 7-101 (107)
23 3r0h_A INAD, inactivation-NO-a 99.7 5.2E-16 1.8E-20 116.4 14.9 112 4-172 83-196 (206)
24 2v90_A PDZ domain-containing p 99.7 2.4E-16 8.1E-21 104.8 11.2 83 89-172 3-89 (96)
25 2dkr_A LIN-7 homolog B; LIN-7B 99.7 1.3E-16 4.4E-21 105.4 9.8 84 88-172 4-90 (93)
26 2dlu_A INAD-like protein; PDZ 99.7 1.6E-16 5.4E-21 108.5 10.5 85 87-172 13-98 (111)
27 2jik_A Synaptojanin-2 binding 99.7 1.9E-16 6.7E-21 106.2 10.7 83 89-172 7-97 (101)
28 1d5g_A Human phosphatase HPTP1 99.7 4.3E-16 1.5E-20 103.5 12.2 84 88-172 4-93 (96)
29 2vwr_A Ligand of NUMB protein 99.7 2.3E-16 7.7E-21 104.7 10.8 84 89-172 3-89 (95)
30 1i16_A Interleukin 16, LCF; cy 99.7 2.1E-16 7.1E-21 111.0 10.9 84 88-172 28-118 (130)
31 2vsp_A PDZ domain-containing p 99.7 6.3E-17 2.2E-21 106.7 7.7 84 88-172 2-86 (91)
32 2d92_A INAD-like protein; PDZ 99.7 2.4E-16 8.2E-21 107.2 10.8 84 88-172 14-105 (108)
33 3qe1_A Sorting nexin-27, G pro 99.7 4E-16 1.4E-20 105.7 11.6 84 88-172 5-102 (107)
34 3r68_A Na(+)/H(+) exchange reg 99.7 3.8E-16 1.3E-20 103.6 11.2 84 88-172 4-88 (95)
35 3cbz_A Dishevelled-2; PDZ doma 99.7 6.3E-17 2.1E-21 110.1 7.5 84 89-172 5-96 (108)
36 1wha_A KIAA0147 protein, scrib 99.7 2.3E-16 7.8E-21 106.7 10.1 83 89-172 7-98 (105)
37 2opg_A Multiple PDZ domain pro 99.7 6.7E-16 2.3E-20 103.0 12.2 83 89-172 4-90 (98)
38 2i1n_A Discs, large homolog 3; 99.7 3.3E-16 1.1E-20 105.3 10.8 83 89-172 4-94 (102)
39 2fne_A Multiple PDZ domain pro 99.7 1.3E-16 4.6E-21 110.1 9.0 84 88-172 24-113 (117)
40 2db5_A INAD-like protein; PDZ 99.7 1E-16 3.5E-21 112.1 8.5 85 88-172 24-115 (128)
41 2ejy_A 55 kDa erythrocyte memb 99.7 2E-16 6.8E-21 105.7 9.5 84 89-172 12-96 (97)
42 2h2b_A Tight junction protein 99.7 7.7E-16 2.6E-20 104.3 12.3 84 88-172 6-97 (107)
43 1v62_A KIAA1719 protein; struc 99.7 4.4E-16 1.5E-20 107.4 11.2 85 88-172 14-102 (117)
44 2byg_A Channel associated prot 99.7 4.5E-16 1.5E-20 107.4 11.2 82 89-171 24-113 (117)
45 2q9v_A Membrane-associated gua 99.7 2.1E-16 7.1E-21 103.8 9.0 83 89-172 2-89 (90)
46 3hpk_A Protein interacting wit 99.7 4.7E-16 1.6E-20 108.3 11.3 83 89-171 19-104 (125)
47 3nfk_A Tyrosine-protein phosph 99.7 2.8E-16 9.6E-21 106.5 9.8 84 88-171 16-107 (107)
48 1uew_A Membrane associated gua 99.7 6.1E-16 2.1E-20 106.1 11.5 85 88-172 9-103 (114)
49 2djt_A Unnamed protein product 99.7 4.4E-16 1.5E-20 105.0 10.6 84 88-172 10-98 (104)
50 2kv8_A RGS12, regulator of G-p 99.7 1.3E-16 4.4E-21 103.4 7.4 82 89-173 2-83 (83)
51 2uzc_A Human pdlim5, PDZ and L 99.7 7E-16 2.4E-20 100.9 11.0 82 89-172 3-86 (88)
52 1ihj_A INAD; intermolecular di 99.7 4.1E-16 1.4E-20 104.0 10.0 84 89-172 5-97 (98)
53 3ngh_A PDZ domain-containing p 99.7 3.3E-16 1.1E-20 106.0 9.7 82 90-171 2-84 (106)
54 2jil_A GRIP1 protein, glutamat 99.7 3.5E-16 1.2E-20 104.1 9.7 83 89-172 3-92 (97)
55 4amh_A Disks large homolog 1; 99.7 4.5E-16 1.5E-20 105.5 10.3 76 97-172 9-92 (106)
56 2f5y_A Regulator of G-protein 99.7 8E-16 2.7E-20 101.4 11.2 81 89-172 3-83 (91)
57 1wf8_A Neurabin-I; PDZ domain, 99.7 3.2E-16 1.1E-20 106.3 9.5 83 89-172 9-100 (107)
58 2r4h_A Membrane-associated gua 99.7 9.6E-16 3.3E-20 104.9 11.9 83 88-171 23-108 (112)
59 2eno_A Synaptojanin-2-binding 99.7 4.3E-16 1.5E-20 107.8 10.2 82 89-171 17-106 (120)
60 1va8_A Maguk P55 subfamily mem 99.7 1.4E-15 4.8E-20 104.2 12.5 83 89-172 25-108 (113)
61 2d90_A PDZ domain containing p 99.7 4.9E-16 1.7E-20 104.4 10.0 83 89-172 6-89 (102)
62 2csj_A TJP2 protein; PDZ domai 99.7 2.1E-16 7.1E-21 108.9 8.2 83 88-171 13-103 (117)
63 3o46_A Maguk P55 subfamily mem 99.7 7.8E-16 2.7E-20 101.8 10.7 83 89-172 4-88 (93)
64 2o2t_A Multiple PDZ domain pro 99.7 2.1E-16 7.3E-21 108.8 8.1 85 88-172 19-110 (117)
65 1uep_A Membrane associated gua 99.7 2.5E-16 8.5E-21 106.2 8.2 84 88-172 8-96 (103)
66 1q3o_A Shank1; PDZ, GKAP, pept 99.7 9.4E-16 3.2E-20 104.3 11.1 83 89-171 7-103 (109)
67 1uju_A Scribble; PDZ domain, c 99.7 1.2E-16 4E-21 109.2 6.5 84 89-172 9-104 (111)
68 1tp5_A Presynaptic density pro 99.7 1.5E-15 5E-20 104.8 12.0 85 86-171 11-97 (119)
69 1um1_A KIAA1849 protein, RSGI 99.7 1.6E-15 5.4E-20 103.3 12.0 84 88-172 7-96 (110)
70 3axa_A Afadin, nectin-3, prote 99.7 1E-15 3.5E-20 103.5 11.0 82 89-172 11-98 (106)
71 2pa1_A PDZ and LIM domain prot 99.7 1.3E-15 4.5E-20 99.4 11.0 81 92-172 3-85 (87)
72 2q3g_A PDZ and LIM domain prot 99.7 9.4E-16 3.2E-20 100.5 10.3 81 90-172 4-86 (89)
73 2dls_A PDZ-rhogef, RHO guanine 99.7 2.7E-15 9.2E-20 99.2 12.6 81 88-172 7-87 (93)
74 2yt7_A Amyloid beta A4 precurs 99.7 1.9E-15 6.4E-20 101.5 12.0 84 89-172 9-99 (101)
75 2qkv_A Inactivation-NO-after-p 99.7 2.6E-15 9E-20 99.9 12.5 83 88-171 7-90 (96)
76 1n7e_A AMPA receptor interacti 99.7 1.9E-15 6.4E-20 100.7 11.8 83 89-172 5-90 (97)
77 1x5q_A LAP4 protein; PDZ domai 99.7 3.1E-15 1.1E-19 101.8 13.1 83 89-172 15-105 (110)
78 1wi4_A Synip, syntaxin binding 99.7 1.4E-15 4.7E-20 103.7 11.2 82 89-172 15-105 (109)
79 2i04_A Membrane-associated gua 99.7 2E-15 6.9E-20 98.0 11.5 79 91-170 2-85 (85)
80 2w4f_A Protein LAP4; structura 99.7 2.1E-15 7.3E-20 100.3 11.9 83 89-172 3-93 (97)
81 1ueq_A Membrane associated gua 99.7 1.9E-15 6.5E-20 105.0 12.1 84 88-172 18-106 (123)
82 1rgw_A ZAsp protein; PDZ, cyph 99.7 7.4E-16 2.5E-20 100.1 9.3 80 91-172 3-84 (85)
83 2fcf_A Multiple PDZ domain pro 99.6 2E-15 6.9E-20 101.5 11.5 84 89-172 4-99 (103)
84 2eei_A PDZ domain-containing p 99.6 4.2E-16 1.4E-20 105.4 7.9 85 87-172 6-91 (106)
85 1nf3_C PAR-6B; semi-CRIB motif 99.6 9.4E-16 3.2E-20 107.3 9.9 86 87-172 27-125 (128)
86 1z87_A Alpha-1-syntrophin; pro 99.6 3.7E-16 1.3E-20 121.7 8.1 86 87-172 75-163 (263)
87 2cs5_A Tyrosine-protein phosph 99.6 8E-16 2.7E-20 106.2 8.7 85 88-172 14-106 (119)
88 1mfg_A ERB-B2 interacting prot 99.6 3.5E-15 1.2E-19 98.9 11.5 79 91-172 5-93 (95)
89 2daz_A INAD-like protein; PDZ 99.6 1.6E-15 5.6E-20 105.5 10.3 84 88-172 24-111 (124)
90 2eeg_A PDZ and LIM domain prot 99.6 2E-15 6.9E-20 100.0 10.2 82 89-172 8-91 (94)
91 1wg6_A Hypothetical protein (r 99.6 7.9E-16 2.7E-20 107.6 8.6 80 93-172 29-122 (127)
92 2la8_A Inactivation-NO-after-p 99.6 1.5E-15 5E-20 103.1 9.6 82 90-172 3-85 (106)
93 2jre_A C60-1 PDZ domain peptid 99.6 2.3E-15 8E-20 102.1 10.6 85 88-172 11-104 (108)
94 2xkx_A Disks large homolog 4; 99.6 2.5E-14 8.7E-19 125.5 19.6 84 88-172 306-391 (721)
95 1q7x_A PDZ2B domain of PTP-BAS 99.6 1.4E-15 4.9E-20 103.2 9.1 84 88-172 8-102 (108)
96 3egg_C Spinophilin; PP1, serin 99.6 2.2E-15 7.7E-20 110.4 10.8 82 89-171 80-170 (170)
97 3bpu_A Membrane-associated gua 99.6 4.9E-15 1.7E-19 96.9 11.2 81 89-172 3-86 (88)
98 1ufx_A KIAA1526 protein; PDZ d 99.6 1.2E-15 4.3E-20 102.9 8.5 83 89-172 6-97 (103)
99 2qt5_A Glutamate receptor-inte 99.6 1.7E-14 5.9E-19 107.8 15.4 122 1-171 66-194 (200)
100 2dmz_A INAD-like protein; PDZ 99.6 1.6E-15 5.5E-20 106.1 9.2 85 88-172 14-106 (129)
101 1uit_A Human discs large 5 pro 99.6 3.9E-15 1.3E-19 102.4 10.8 83 89-172 19-101 (117)
102 2pkt_A PDZ and LIM domain prot 99.6 5.3E-15 1.8E-19 97.3 11.0 81 90-172 4-86 (91)
103 2iwq_A Multiple PDZ domain pro 99.6 4.4E-15 1.5E-19 103.3 10.9 85 88-172 23-119 (123)
104 1n7t_A 99-MER peptide of densi 99.6 4.6E-15 1.6E-19 99.8 10.6 82 88-172 10-101 (103)
105 2eeh_A PDZ domain-containing p 99.6 5.8E-15 2E-19 98.9 10.8 83 89-172 10-94 (100)
106 1wfg_A Regulating synaptic mem 99.6 3.4E-15 1.2E-19 104.9 10.0 74 99-172 46-127 (131)
107 2edz_A PDZ domain-containing p 99.6 6.2E-15 2.1E-19 101.0 10.8 83 89-171 13-96 (114)
108 3soe_A Membrane-associated gua 99.6 6.3E-15 2.2E-19 100.8 10.7 80 89-172 12-93 (113)
109 2e7k_A Maguk P55 subfamily mem 99.6 2.2E-15 7.6E-20 99.3 8.2 82 89-172 6-88 (91)
110 2kpk_A Membrane-associated gua 99.6 3.2E-15 1.1E-19 104.7 9.5 84 88-172 17-105 (129)
111 3khf_A Microtubule-associated 99.6 3.2E-15 1.1E-19 99.9 8.8 80 92-172 5-93 (99)
112 1x6d_A Interleukin-16; PDZ dom 99.6 4.6E-15 1.6E-19 102.4 9.8 84 89-172 15-103 (119)
113 3k1r_A Harmonin; protein-prote 99.6 7.4E-15 2.5E-19 109.5 11.5 84 88-172 83-168 (192)
114 2dm8_A INAD-like protein; PDZ 99.6 5.8E-15 2E-19 101.3 10.1 83 89-172 17-103 (116)
115 1um7_A Synapse-associated prot 99.6 2.5E-15 8.5E-20 102.6 8.1 84 87-171 13-98 (113)
116 2g5m_B Neurabin-2; spinophilin 99.6 1.8E-15 6.1E-20 103.5 7.1 83 89-172 4-95 (113)
117 2gzv_A PRKCA-binding protein; 99.6 1.4E-14 4.8E-19 99.4 11.6 83 89-171 24-109 (114)
118 2koj_A Partitioning defective 99.6 1.6E-14 5.3E-19 98.4 11.7 83 89-172 11-101 (111)
119 1wf7_A Enigma homologue protei 99.6 3.1E-15 1E-19 100.7 8.0 83 88-172 4-88 (103)
120 1wfv_A Membrane associated gua 99.6 1.6E-15 5.3E-20 102.0 6.2 83 89-172 11-96 (103)
121 1v5q_A GRIP1 homolog, glutamat 99.6 8.4E-15 2.9E-19 101.6 9.5 85 88-172 14-107 (122)
122 2edp_A Fragment, shroom family 99.6 7.7E-15 2.6E-19 98.3 8.7 83 89-172 9-94 (100)
123 2vsv_A Rhophilin-2; scaffold p 99.6 1.4E-14 4.9E-19 98.6 10.1 81 89-172 23-104 (109)
124 2jxo_A Ezrin-radixin-moesin-bi 99.6 1.6E-14 5.5E-19 96.2 10.2 83 88-171 8-92 (98)
125 1vb7_A PDZ and LIM domain 2; P 99.6 4.2E-15 1.4E-19 98.4 7.3 80 93-172 8-89 (94)
126 3tsv_A Tight junction protein 99.6 1.8E-14 6.2E-19 100.3 10.8 81 90-172 30-112 (124)
127 2iwn_A Multiple PDZ domain pro 99.6 2.3E-14 7.7E-19 95.0 10.7 81 90-171 5-92 (97)
128 2z17_A Pleckstrin homology SEC 99.6 1E-14 3.4E-19 98.4 9.0 81 88-168 14-103 (104)
129 2xkx_A Disks large homolog 4; 99.6 3.1E-14 1.1E-18 124.9 14.4 115 1-172 122-244 (721)
130 3gsl_A Disks large homolog 4; 99.6 2E-14 6.9E-19 106.5 11.2 82 89-171 5-94 (196)
131 2lob_A Golgi-associated PDZ an 99.3 2E-16 6.7E-21 108.4 0.0 84 87-170 25-111 (112)
132 1whd_A RGS3, regulator of G-pr 99.6 7.2E-15 2.5E-19 98.4 7.6 83 87-172 13-95 (100)
133 2edv_A FERM and PDZ domain-con 99.6 3.6E-15 1.2E-19 99.3 5.9 81 89-172 8-89 (96)
134 2yuy_A RHO GTPase activating p 99.6 2.2E-15 7.6E-20 105.1 4.5 84 88-172 7-120 (126)
135 2kom_A Partitioning defective 99.6 6.1E-14 2.1E-18 97.1 11.6 83 89-172 30-120 (121)
136 1ujv_A Membrane associated gua 99.5 1.3E-13 4.4E-18 91.7 12.4 81 88-172 9-91 (96)
137 1y7n_A Amyloid beta A4 precurs 99.5 6.7E-14 2.3E-18 92.1 10.6 79 89-172 11-90 (90)
138 3e17_A Tight junction protein 99.5 4.5E-14 1.5E-18 92.5 9.6 76 93-172 4-81 (88)
139 1wif_A RSGI RUH-020, riken cDN 99.5 6.3E-14 2.1E-18 97.8 10.9 82 88-171 26-110 (126)
140 1p1d_A PDZ45, glutamate recept 99.5 2E-13 7E-18 101.7 14.4 119 2-172 70-195 (196)
141 2qt5_A Glutamate receptor-inte 99.5 4.7E-14 1.6E-18 105.4 10.9 84 88-171 6-92 (200)
142 1v6b_A Harmonin isoform A1; st 99.5 2.6E-14 9E-19 98.6 8.7 81 89-171 18-106 (118)
143 2vz5_A TAX1-binding protein 3; 99.5 6.1E-14 2.1E-18 99.5 10.6 84 89-172 23-124 (139)
144 3r0h_A INAD, inactivation-NO-a 99.5 1.3E-13 4.4E-18 103.3 12.5 84 88-172 17-108 (206)
145 1uez_A KIAA1526 protein; PDZ d 99.5 3.2E-14 1.1E-18 95.3 8.1 84 88-172 7-93 (101)
146 1x5n_A Harmonin; PDZ domain, u 99.5 9.9E-14 3.4E-18 94.9 10.7 83 88-171 14-98 (114)
147 3sfj_A TAX1-binding protein 3; 99.5 1.2E-13 4.3E-18 92.8 11.0 80 92-171 7-104 (104)
148 1qau_A Neuronal nitric oxide s 99.5 2E-13 6.9E-18 93.0 12.0 82 91-172 3-87 (112)
149 3kzd_A TIAM-1, T-lymphoma inva 99.5 1.6E-13 5.4E-18 90.9 10.3 82 89-172 6-92 (94)
150 2kjd_A Sodium/hydrogen exchang 99.5 2.2E-13 7.6E-18 94.9 11.2 83 88-171 8-92 (128)
151 3shw_A Tight junction protein 99.5 7.7E-14 2.6E-18 116.5 10.3 80 90-171 2-83 (468)
152 2qbw_A PDZ-fibronectin fusion 99.5 1.8E-13 6.3E-18 101.7 10.3 69 101-170 2-80 (195)
153 2d8i_A T-cell lymphoma invasio 99.5 9.8E-14 3.3E-18 95.2 8.1 82 89-172 15-101 (114)
154 1v5l_A PDZ and LIM domain 3; a 99.5 4E-14 1.4E-18 95.3 5.9 81 90-172 6-88 (103)
155 1b8q_A Protein (neuronal nitri 99.5 1.8E-13 6.3E-18 95.3 9.0 84 89-172 8-94 (127)
156 1p1d_A PDZ45, glutamate recept 99.5 2.1E-13 7.3E-18 101.6 9.9 84 89-172 6-98 (196)
157 1uf1_A KIAA1526 protein; PDZ d 99.5 6.4E-13 2.2E-17 92.7 11.5 83 89-172 20-104 (128)
158 3tsz_A Tight junction protein 99.5 3.2E-13 1.1E-17 110.8 11.1 81 89-171 9-91 (391)
159 1vae_A Rhophilin 2, rhophilin, 99.5 3.5E-14 1.2E-18 97.0 4.3 82 87-171 13-95 (111)
160 3cyy_A Tight junction protein 99.4 1.7E-12 5.7E-17 85.2 11.2 79 90-172 3-83 (92)
161 2eaq_A LIM domain only protein 99.4 9.3E-13 3.2E-17 86.2 9.2 81 91-172 5-89 (90)
162 2rcz_A Tight junction protein 99.4 3.2E-12 1.1E-16 81.7 10.2 73 95-171 7-80 (81)
163 2krg_A Na(+)/H(+) exchange reg 99.4 2.1E-13 7.2E-18 103.4 5.3 83 88-171 8-92 (216)
164 1w9e_A Syntenin 1; cell adhesi 99.4 4.2E-12 1.4E-16 92.2 11.8 82 89-171 4-86 (166)
165 3qik_A Phosphatidylinositol 3, 99.3 5.7E-12 1.9E-16 84.1 9.1 80 90-171 18-100 (101)
166 2yub_A LIMK-2, LIM domain kina 99.3 7.2E-12 2.5E-16 86.3 9.8 83 90-172 13-105 (118)
167 1wh1_A KIAA1095 protein; PDZ d 99.3 5.2E-12 1.8E-16 87.6 8.1 80 91-172 21-107 (124)
168 3suz_A Amyloid beta A4 precurs 99.2 4.7E-12 1.6E-16 103.8 5.3 84 89-172 204-294 (388)
169 3suz_A Amyloid beta A4 precurs 99.2 1.4E-12 4.8E-17 106.9 2.1 65 101-170 308-372 (388)
170 1w9e_A Syntenin 1; cell adhesi 99.2 6.1E-10 2.1E-14 80.7 14.5 74 92-170 91-164 (166)
171 3i18_A LMO2051 protein; alpha- 98.9 4.6E-09 1.6E-13 69.9 7.5 58 112-172 6-65 (100)
172 2l97_A HTRA, putative serine p 98.9 5.4E-09 1.8E-13 73.3 8.1 58 112-172 56-115 (134)
173 2kl1_A YLBL protein; structure 98.9 2.9E-09 1E-13 70.2 5.4 58 112-172 4-63 (94)
174 2kjp_A Uncharacterized protein 98.8 7.2E-10 2.5E-14 72.8 1.9 56 114-172 2-59 (91)
175 3rle_A Golgi reassembly-stacki 98.8 5.2E-09 1.8E-13 78.6 6.8 60 112-171 15-75 (209)
176 2pzd_A Serine protease HTRA2; 98.8 9.9E-09 3.4E-13 69.6 7.5 58 112-172 34-91 (113)
177 3id1_A Regulator of sigma E pr 98.8 8.8E-09 3E-13 68.0 6.5 55 116-172 5-61 (95)
178 3rle_A Golgi reassembly-stacki 98.8 8.7E-08 3E-12 71.9 12.6 68 101-171 95-169 (209)
179 1fc6_A Photosystem II D1 prote 98.8 2.7E-08 9.2E-13 81.4 10.6 73 100-172 84-159 (388)
180 2i6v_A General secretion pathw 98.8 6.7E-09 2.3E-13 67.3 5.2 58 113-172 19-78 (87)
181 2p3w_A Probable serine proteas 98.7 2.4E-08 8.2E-13 67.6 6.9 58 112-172 34-91 (112)
182 2i4s_A General secretion pathw 98.7 3.4E-08 1.2E-12 66.2 7.5 59 114-172 38-96 (105)
183 4a8c_A Periplasmic PH-dependen 98.7 2E-07 6.9E-12 77.3 13.1 58 113-172 363-420 (436)
184 1y8t_A Hypothetical protein RV 98.7 5.2E-08 1.8E-12 77.7 9.1 57 112-170 241-299 (324)
185 2zpm_A Regulator of sigma E pr 98.7 1.8E-08 6.2E-13 65.5 4.7 57 114-172 5-62 (91)
186 1te0_A Protease DEGS; two doma 98.7 6.3E-08 2.2E-12 77.1 8.4 58 113-172 244-303 (318)
187 3k50_A Putative S41 protease; 98.7 2.7E-08 9.3E-13 81.8 6.3 69 100-171 73-145 (403)
188 2hga_A Conserved protein MTH13 98.7 5.5E-08 1.9E-12 67.4 6.6 57 111-171 23-81 (125)
189 3stj_A Protease DEGQ; serine p 98.6 4.8E-08 1.6E-12 78.7 6.6 58 113-172 263-322 (345)
190 4a8c_A Periplasmic PH-dependen 98.6 1.2E-07 4E-12 78.7 7.7 60 113-172 263-322 (436)
191 3pv2_A DEGQ; trypsin fold, PDZ 98.6 1.2E-07 4E-12 79.1 7.0 60 113-172 282-341 (451)
192 4fgm_A Aminopeptidase N family 98.5 2.3E-07 7.8E-12 79.8 8.1 68 101-172 485-554 (597)
193 3qo6_A Protease DO-like 1, chl 98.5 1.3E-07 4.4E-12 76.3 6.1 58 113-172 251-321 (348)
194 1lcy_A HTRA2 serine protease; 98.4 7.7E-07 2.6E-11 71.0 8.2 57 113-172 256-312 (325)
195 3pv2_A DEGQ; trypsin fold, PDZ 98.4 4.2E-07 1.4E-11 75.7 6.8 58 113-172 386-443 (451)
196 1ky9_A Protease DO, DEGP, HTRA 98.1 5.1E-07 1.8E-11 75.1 1.3 58 113-172 286-345 (448)
197 3num_A Serine protease HTRA1; 98.1 3.8E-07 1.3E-11 73.0 0.0 57 113-172 254-310 (332)
198 1k32_A Tricorn protease; prote 98.1 9.6E-06 3.3E-10 73.3 9.1 69 100-172 736-815 (1045)
199 1ky9_A Protease DO, DEGP, HTRA 98.1 5.4E-07 1.8E-11 75.0 0.0 68 103-172 372-440 (448)
200 4fln_A Protease DO-like 2, chl 98.0 1.3E-05 4.3E-10 68.1 7.6 59 113-172 277-345 (539)
201 4fln_A Protease DO-like 2, chl 96.6 0.0038 1.3E-07 53.0 6.5 55 112-168 414-469 (539)
202 1r6j_A Syntenin 1; PDZ, membra 96.3 0.0055 1.9E-07 38.8 4.2 26 1-26 55-80 (82)
203 3soe_A Membrane-associated gua 96.2 0.0062 2.1E-07 41.0 4.6 30 1-30 64-95 (113)
204 1z87_A Alpha-1-syntrophin; pro 94.2 0.17 5.9E-06 38.9 7.4 30 1-30 136-165 (263)
205 1v62_A KIAA1719 protein; struc 93.6 0.13 4.6E-06 34.2 5.2 29 2-30 76-104 (117)
206 3e17_A Tight junction protein 93.4 0.079 2.7E-06 33.4 3.6 29 2-30 55-83 (88)
207 3axa_A Afadin, nectin-3, prote 93.0 0.16 5.5E-06 33.0 4.8 32 1-32 71-102 (106)
208 1ujv_A Membrane associated gua 92.9 0.17 5.8E-06 32.4 4.7 29 1-29 62-92 (96)
209 2kpk_A Membrane-associated gua 92.9 0.4 1.4E-05 32.3 6.8 29 2-30 77-107 (129)
210 2dc2_A GOPC, golgi associated 92.6 0.16 5.5E-06 32.9 4.3 30 1-30 68-97 (103)
211 1ueq_A Membrane associated gua 92.4 0.39 1.3E-05 32.1 6.2 29 2-30 78-108 (123)
212 1wha_A KIAA0147 protein, scrib 92.3 0.17 5.7E-06 32.8 4.1 29 2-30 72-100 (105)
213 4amh_A Disks large homolog 1; 92.1 0.21 7.1E-06 32.6 4.3 29 1-29 65-93 (106)
214 3gge_A PDZ domain-containing p 91.6 0.23 8E-06 32.1 4.1 27 1-27 61-89 (95)
215 2dkr_A LIN-7 homolog B; LIN-7B 91.5 0.22 7.5E-06 31.3 3.9 28 2-29 64-91 (93)
216 2kv8_A RGS12, regulator of G-p 91.5 0.23 8E-06 30.5 3.9 28 1-28 55-82 (83)
217 3o46_A Maguk P55 subfamily mem 91.4 0.2 6.7E-06 31.7 3.5 28 2-29 62-89 (93)
218 2he4_A Na(+)/H(+) exchange reg 91.3 0.3 1E-05 30.5 4.4 29 1-29 60-88 (90)
219 2i1n_A Discs, large homolog 3; 91.2 0.31 1E-05 31.3 4.4 30 1-30 67-96 (102)
220 2edv_A FERM and PDZ domain-con 91.1 0.27 9.1E-06 31.4 4.0 27 2-28 63-89 (96)
221 2dlu_A INAD-like protein; PDZ 91.0 0.26 8.9E-06 32.2 4.0 29 2-30 72-100 (111)
222 2dm8_A INAD-like protein; PDZ 90.8 0.61 2.1E-05 30.6 5.7 32 1-32 76-107 (116)
223 3cbz_A Dishevelled-2; PDZ doma 90.8 0.23 8E-06 32.4 3.6 29 1-29 66-97 (108)
224 2awx_A Synapse associated prot 90.6 0.36 1.2E-05 31.2 4.3 30 1-30 66-95 (105)
225 2koj_A Partitioning defective 90.5 0.55 1.9E-05 30.5 5.3 31 2-32 73-105 (111)
226 2jil_A GRIP1 protein, glutamat 90.5 0.35 1.2E-05 30.7 4.1 28 2-29 66-93 (97)
227 2vwr_A Ligand of NUMB protein 90.5 0.44 1.5E-05 30.1 4.6 29 1-29 62-90 (95)
228 2csj_A TJP2 protein; PDZ domai 90.4 0.32 1.1E-05 32.2 4.0 30 1-30 77-106 (117)
229 1uit_A Human discs large 5 pro 90.3 0.52 1.8E-05 31.0 5.1 33 1-33 74-106 (117)
230 2opg_A Multiple PDZ domain pro 90.3 0.51 1.7E-05 29.9 4.8 30 1-30 63-92 (98)
231 2qg1_A Multiple PDZ domain pro 90.2 0.43 1.5E-05 29.9 4.4 28 2-29 63-90 (92)
232 3khf_A Microtubule-associated 89.9 0.46 1.6E-05 30.2 4.4 28 2-29 67-94 (99)
233 3i4w_A Disks large homolog 4; 89.8 0.25 8.5E-06 31.8 3.0 31 2-32 69-99 (104)
234 1n7e_A AMPA receptor interacti 89.7 0.48 1.6E-05 30.1 4.3 28 2-29 64-91 (97)
235 2g5m_B Neurabin-2; spinophilin 89.7 0.38 1.3E-05 31.5 3.9 30 1-30 68-97 (113)
236 1kwa_A Hcask/LIN-2 protein; PD 89.7 0.33 1.1E-05 30.4 3.5 28 2-29 59-86 (88)
237 1wfv_A Membrane associated gua 89.7 0.38 1.3E-05 30.8 3.8 30 1-30 69-98 (103)
238 2eno_A Synaptojanin-2-binding 89.5 0.44 1.5E-05 31.6 4.2 30 1-30 80-109 (120)
239 2f5y_A Regulator of G-protein 89.3 0.54 1.8E-05 29.5 4.3 29 2-30 57-85 (91)
240 1um7_A Synapse-associated prot 88.9 0.16 5.6E-06 33.2 1.6 33 1-33 72-104 (113)
241 2uzc_A Human pdlim5, PDZ and L 88.8 0.64 2.2E-05 28.8 4.3 27 2-28 60-86 (88)
242 1uep_A Membrane associated gua 88.7 0.33 1.1E-05 31.3 3.0 28 2-29 68-97 (103)
243 2qkv_A Inactivation-NO-after-p 88.6 0.64 2.2E-05 29.5 4.3 29 1-29 64-92 (96)
244 3hpk_A Protein interacting wit 88.4 0.56 1.9E-05 31.3 4.1 27 2-28 79-105 (125)
245 1rgw_A ZAsp protein; PDZ, cyph 88.4 0.59 2E-05 28.7 4.0 27 2-28 58-84 (85)
246 2q3g_A PDZ and LIM domain prot 88.2 0.5 1.7E-05 29.4 3.6 28 2-29 60-87 (89)
247 1uew_A Membrane associated gua 88.1 0.55 1.9E-05 30.8 3.9 28 2-29 77-104 (114)
248 2dmz_A INAD-like protein; PDZ 88.1 0.53 1.8E-05 31.6 3.8 29 2-30 80-108 (129)
249 2vsp_A PDZ domain-containing p 87.9 0.64 2.2E-05 29.0 3.9 28 2-29 60-87 (91)
250 2v90_A PDZ domain-containing p 87.8 0.77 2.6E-05 28.9 4.3 28 2-29 63-90 (96)
251 1um1_A KIAA1849 protein, RSGI 87.5 0.77 2.6E-05 29.8 4.3 29 2-30 70-98 (110)
252 3r68_A Na(+)/H(+) exchange reg 87.2 0.89 3E-05 28.5 4.4 29 1-29 61-89 (95)
253 2la8_A Inactivation-NO-after-p 87.0 0.79 2.7E-05 29.8 4.1 29 1-29 58-86 (106)
254 1x6d_A Interleukin-16; PDZ dom 86.7 1.2 4.1E-05 29.3 5.0 30 1-30 75-105 (119)
255 2pa1_A PDZ and LIM domain prot 86.1 1 3.6E-05 27.7 4.1 27 2-28 59-85 (87)
256 1vb7_A PDZ and LIM domain 2; P 85.4 1.1 3.8E-05 28.1 4.0 28 2-29 63-90 (94)
257 2pkt_A PDZ and LIM domain prot 85.3 1.3 4.4E-05 27.5 4.3 28 2-29 60-87 (91)
258 3ngh_A PDZ domain-containing p 85.2 1 3.6E-05 28.9 3.9 28 2-29 59-86 (106)
259 1v5q_A GRIP1 homolog, glutamat 84.5 1.6 5.6E-05 28.9 4.8 29 2-30 79-109 (122)
260 3bpu_A Membrane-associated gua 84.4 1.4 4.7E-05 27.2 4.1 27 2-28 58-86 (88)
261 2edz_A PDZ domain-containing p 84.4 0.96 3.3E-05 29.6 3.5 28 2-29 71-98 (114)
262 2cs5_A Tyrosine-protein phosph 84.1 0.93 3.2E-05 29.9 3.4 29 1-29 75-107 (119)
263 2qbw_A PDZ-fibronectin fusion 83.9 1.4 4.7E-05 31.5 4.5 26 1-26 55-80 (195)
264 1tp5_A Presynaptic density pro 83.7 0.91 3.1E-05 29.9 3.2 32 1-32 71-102 (119)
265 1wf7_A Enigma homologue protei 83.5 1.5 5.2E-05 28.0 4.2 29 2-30 62-90 (103)
266 2d90_A PDZ domain containing p 83.3 1.4 4.7E-05 28.1 3.8 28 2-29 63-90 (102)
267 1v5l_A PDZ and LIM domain 3; a 83.3 1.4 4.7E-05 28.2 3.8 29 2-30 62-90 (103)
268 2eei_A PDZ domain-containing p 82.9 1.2 3.9E-05 28.7 3.4 28 2-29 65-92 (106)
269 2rcz_A Tight junction protein 82.6 1.8 6.1E-05 26.0 4.0 26 2-27 55-80 (81)
270 1wif_A RSGI RUH-020, riken cDN 82.3 1.6 5.4E-05 29.5 4.0 25 3-27 84-110 (126)
271 2dls_A PDZ-rhogef, RHO guanine 82.1 2 6.7E-05 26.9 4.2 27 2-29 62-88 (93)
272 1g9o_A NHE-RF; PDZ domain, com 81.6 2.6 8.7E-05 26.1 4.6 26 2-27 60-85 (91)
273 3cyy_A Tight junction protein 80.2 2.3 7.8E-05 26.3 4.0 28 2-29 57-84 (92)
274 2e7k_A Maguk P55 subfamily mem 76.4 1.9 6.5E-05 26.9 2.7 24 4-27 64-87 (91)
275 2h2b_A Tight junction protein 76.1 3.6 0.00012 26.2 4.1 29 1-29 70-98 (107)
276 3shw_A Tight junction protein 75.9 1.6 5.6E-05 36.2 2.9 31 1-31 55-87 (468)
277 2yub_A LIMK-2, LIM domain kina 74.6 4.7 0.00016 26.6 4.4 29 2-30 79-107 (118)
278 3dor_A Protein CT_858, CPAF; m 69.6 8.7 0.0003 32.8 5.8 41 102-146 85-125 (583)
279 2edp_A Fragment, shroom family 69.4 3 0.0001 26.4 2.4 24 6-29 72-95 (100)
280 2d8i_A T-cell lymphoma invasio 68.4 9.4 0.00032 25.0 4.8 29 2-32 77-105 (114)
281 3tsz_A Tight junction protein 65.4 3.9 0.00013 33.0 2.8 32 1-32 63-96 (391)
282 2krg_A Na(+)/H(+) exchange reg 63.2 9.6 0.00033 28.0 4.4 28 2-29 66-94 (216)
283 1vae_A Rhophilin 2, rhophilin, 62.8 11 0.00037 24.4 4.2 27 3-29 70-97 (111)
284 1qau_A Neuronal nitric oxide s 62.4 11 0.00039 24.0 4.3 29 2-30 60-89 (112)
285 1b8q_A Protein (neuronal nitri 59.5 12 0.0004 24.6 4.0 29 2-30 67-96 (127)
286 1uf1_A KIAA1526 protein; PDZ d 58.2 16 0.00055 24.0 4.5 28 2-30 79-106 (128)
287 1wh1_A KIAA1095 protein; PDZ d 46.4 27 0.00091 22.8 4.1 26 5-30 83-109 (124)
288 1a62_A RHO; transcription term 38.1 35 0.0012 22.9 3.7 39 95-138 55-98 (130)
289 1cq3_A Viral chemokine inhibit 34.4 22 0.00077 25.9 2.2 25 3-27 120-144 (233)
290 3ouv_A Serine/threonine protei 25.7 93 0.0032 17.8 3.7 22 1-22 13-34 (71)
291 1ffk_F Ribosomal protein L10E; 22.1 89 0.0031 21.8 3.5 44 123-171 106-154 (157)
292 2ooa_A E3 ubiquitin-protein li 22.0 38 0.0013 19.0 1.3 18 3-20 22-39 (52)
293 3bbo_O Ribosomal protein L16; 20.6 1E+02 0.0034 20.9 3.4 21 123-143 88-109 (135)
294 2ftc_I Mitochondrial ribosomal 20.4 34 0.0012 22.7 1.0 36 123-162 75-111 (118)
No 1
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.78 E-value=2e-18 Score=111.91 Aligned_cols=77 Identities=22% Similarity=0.314 Sum_probs=71.8
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
++|.|+|.|...++|||++.+| +|..+.+++||+++||+.||+|++|||+++.+++|++++.+|+.++..|+|+|
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~g-----~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v 78 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKNG-----KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITI 78 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEETT-----EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEE
T ss_pred ceEEEEEEECCCCCeEEEEECC-----EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEE
Confidence 6899999998867899999875 48999999999999999999999999999999999999999999999999998
Q ss_pred EE
Q psy7774 169 HS 170 (173)
Q Consensus 169 ~r 170 (173)
..
T Consensus 79 ~p 80 (82)
T 1r6j_A 79 MP 80 (82)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 2
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.74 E-value=2e-17 Score=114.03 Aligned_cols=87 Identities=34% Similarity=0.537 Sum_probs=79.3
Q ss_pred CCCCCEEEEEEccCCCcccEEEEccCC-----------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHH
Q psy7774 86 RSGEPRFLMIETRKCSNLGISLVGGNA-----------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEA 153 (173)
Q Consensus 86 ~~~~~~~v~l~~~~~~~lG~~l~gg~~-----------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~ 153 (173)
.+.+++.|.|.+..+.+|||++.|+.+ .+++|..|.++++|+++| |+.||+|++|||.++.++++.++
T Consensus 12 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 91 (117)
T 2ehr_A 12 HWGPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEA 91 (117)
T ss_dssp CBCCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHH
T ss_pred cCCCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 355789999999877899999998763 589999999999999999 99999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEECC
Q psy7774 154 AYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 154 ~~~l~~~g~~v~l~v~r~~ 172 (173)
+.+++..+..+.|+|.|..
T Consensus 92 ~~~~~~~g~~v~l~v~r~~ 110 (117)
T 2ehr_A 92 VEAIKNAGNPVVFIVQSLS 110 (117)
T ss_dssp HHHHHTSCSSEEEEECCBS
T ss_pred HHHHHcCCCeEEEEEEECC
Confidence 9999999999999998864
No 3
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.73 E-value=2.7e-17 Score=107.44 Aligned_cols=82 Identities=28% Similarity=0.446 Sum_probs=75.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
+++.|+|.+....+|||++.++. ..+++|..|.++|||++ +||+.||+|++|||.++.++++.+++..++..++.+.
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 81 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 81 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CEEEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 57899999987789999999875 34799999999999999 7999999999999999999999999999998899999
Q ss_pred EEEEE
Q psy7774 166 VLAHS 170 (173)
Q Consensus 166 l~v~r 170 (173)
|+|++
T Consensus 82 l~v~~ 86 (87)
T 4e34_A 82 FEVVY 86 (87)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 4
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.73 E-value=4.9e-17 Score=106.92 Aligned_cols=83 Identities=30% Similarity=0.428 Sum_probs=76.7
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCccccc-CCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~-gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
++++|++.+....+|||++.++. ..+++|..|.++|||+++ ||+.||+|++|||.++.++++.+++..++..+..+.
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~ 83 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVV 83 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 68999999977789999999875 468999999999999998 899999999999999999999999999998899999
Q ss_pred EEEEEC
Q psy7774 166 VLAHSD 171 (173)
Q Consensus 166 l~v~r~ 171 (173)
|+++|.
T Consensus 84 l~v~r~ 89 (90)
T 1qav_A 84 LEVKYM 89 (90)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999885
No 5
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.73 E-value=5.3e-17 Score=114.39 Aligned_cols=85 Identities=22% Similarity=0.389 Sum_probs=77.3
Q ss_pred CCCEEEEEEccCCCcccEEEEccCCC--------------CEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHH
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNAV--------------GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEA 153 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~~--------------~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~ 153 (173)
.+++.|+|.|....+|||+|.++... +++|..|.++++|+++||+.||+|++|||.++.++++.++
T Consensus 26 ~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~ 105 (132)
T 3l4f_D 26 IKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV 105 (132)
T ss_dssp CCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHH
T ss_pred CCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 46789999997778999999987642 6999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEECC
Q psy7774 154 AYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 154 ~~~l~~~g~~v~l~v~r~~ 172 (173)
+.+++..++.+.|+|.|..
T Consensus 106 ~~~l~~~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 106 VNMIRQGGNTLMVKVVMVT 124 (132)
T ss_dssp HHHHHHTTTEEEEEEECCC
T ss_pred HHHHHcCCCEEEEEEEECC
Confidence 9999989999999998764
No 6
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.73 E-value=8.4e-17 Score=105.81 Aligned_cols=83 Identities=25% Similarity=0.450 Sum_probs=76.8
Q ss_pred CCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
.+|.|+|.+.. .+|||.+.++. ..+++|..|.++++|+++||+.||+|++|||.++.++++.++..+++..+..+.|+
T Consensus 4 ~~r~v~l~k~~-~g~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 82 (90)
T 2he4_A 4 RPRLCHLRKGP-QGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLL 82 (90)
T ss_dssp CCEEEEEECBT-TBCCEEEEECSSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEE
T ss_pred CcEEEEEEECC-CCccEEEEccCCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence 68999999987 79999999876 46899999999999999999999999999999999999999999998889999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
+.|..
T Consensus 83 v~r~~ 87 (90)
T 2he4_A 83 VVGPS 87 (90)
T ss_dssp EECCC
T ss_pred EEccC
Confidence 99874
No 7
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.72 E-value=4.9e-17 Score=112.47 Aligned_cols=83 Identities=27% Similarity=0.461 Sum_probs=76.7
Q ss_pred CCEEEEEEccCCCcccEEEEccC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPAD 162 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~ 162 (173)
.++.|.+.+..+.+|||++.++. ..++||..|.++|+|+++| |+.||+|++|||.++.++++.+++.+++..++
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 103 (118)
T 3b76_A 24 HEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSS 103 (118)
T ss_dssp EEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCS
T ss_pred CcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 56889999887789999999885 4589999999999999999 99999999999999999999999999999999
Q ss_pred eEEEEEEEC
Q psy7774 163 KVTVLAHSD 171 (173)
Q Consensus 163 ~v~l~v~r~ 171 (173)
.+.|+|.|.
T Consensus 104 ~v~L~v~R~ 112 (118)
T 3b76_A 104 SIVLKALEV 112 (118)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEC
Confidence 999999885
No 8
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.72 E-value=2.3e-17 Score=114.43 Aligned_cols=85 Identities=24% Similarity=0.348 Sum_probs=73.4
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-----CCCEEEEEecCCCccccc-CCCCCCEEEEECCEecCCCCHHHHHHHHhCCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPA 161 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-----~~~i~V~~v~~gs~A~~~-gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g 161 (173)
.+++.|.|.|..+.+|||++.++. ..++||..|.++++|+++ ||+.||+|++|||.++.++++.+++.+++..+
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 102 (120)
T 2iwo_A 23 MGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS 102 (120)
T ss_dssp --CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred CCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 368999999988679999999875 348999999999999997 89999999999999999999999999999889
Q ss_pred CeEEEEEEECC
Q psy7774 162 DKVTVLAHSDT 172 (173)
Q Consensus 162 ~~v~l~v~r~~ 172 (173)
+.+.|+|.|..
T Consensus 103 ~~v~l~v~r~g 113 (120)
T 2iwo_A 103 GSIEMQVVAGG 113 (120)
T ss_dssp SEEEEEEECCT
T ss_pred CeEEEEEEECC
Confidence 99999999864
No 9
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.72 E-value=5.5e-17 Score=106.48 Aligned_cols=83 Identities=20% Similarity=0.235 Sum_probs=74.7
Q ss_pred CEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
.|.|.|.|.++.+|||++.++...+++|..|.+++||++ +||+.||+|++|||.++.++++++++.+++.....+.|++
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v 81 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKI 81 (88)
T ss_dssp CEEEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEE
T ss_pred eEEEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEE
Confidence 578999998778999999975556899999999999999 8899999999999999999999999999986555999999
Q ss_pred EECC
Q psy7774 169 HSDT 172 (173)
Q Consensus 169 ~r~~ 172 (173)
.|..
T Consensus 82 ~r~~ 85 (88)
T 1kwa_A 82 VPSY 85 (88)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 8864
No 10
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.71 E-value=8.2e-17 Score=106.55 Aligned_cols=84 Identities=15% Similarity=0.235 Sum_probs=74.6
Q ss_pred CCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC--CCCeE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK--PADKV 164 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~~v 164 (173)
.+++.|.|.|.. ++|||+|.++....+||++|.+|++|++.| |++||.|++|||+++.+++|.+++.+|++ .|..+
T Consensus 4 g~~k~V~l~K~~-~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~ 82 (95)
T 3gge_A 4 GIEKEVNVYKSE-DSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELF 82 (95)
T ss_dssp EEEEEEEEECCS-SCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEE
T ss_pred CeEEEEEEEECC-CCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEE
Confidence 357899999977 999999997656679999999999999955 99999999999999999999999999985 57789
Q ss_pred EEEEEECC
Q psy7774 165 TVLAHSDT 172 (173)
Q Consensus 165 ~l~v~r~~ 172 (173)
+|.+.++.
T Consensus 83 ~L~lv~p~ 90 (95)
T 3gge_A 83 TMKLIEPK 90 (95)
T ss_dssp EEEEEEEC
T ss_pred EEEEECcc
Confidence 99887753
No 11
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.71 E-value=1.6e-16 Score=107.10 Aligned_cols=84 Identities=38% Similarity=0.648 Sum_probs=76.9
Q ss_pred CCCCEEEEEEccCCCcccEEEEccCC-CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 87 SGEPRFLMIETRKCSNLGISLVGGNA-VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 87 ~~~~~~v~l~~~~~~~lG~~l~gg~~-~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
..+++.|.|.+.. .+|||.+.++.. .+++|..|.++|+|+++| |+.||+|++|||.++.++++.+++..++..++.+
T Consensus 9 ~~~~~~v~l~k~~-~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 87 (104)
T 3i4w_A 9 PREPRRIVIHRGS-TGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 87 (104)
T ss_dssp CSSCEEEEEECBT-TBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEE
T ss_pred CCccEEEEEEeCC-CccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3478999999986 799999998774 499999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEEEC
Q psy7774 165 TVLAHSD 171 (173)
Q Consensus 165 ~l~v~r~ 171 (173)
.|++.|+
T Consensus 88 ~l~v~r~ 94 (104)
T 3i4w_A 88 TIIAQYK 94 (104)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999986
No 12
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.71 E-value=2e-16 Score=104.12 Aligned_cols=82 Identities=28% Similarity=0.484 Sum_probs=73.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
+|+.|+|.|.+ .+|||++.++. ..+++|..|.++|||+++||+.||+|++|||.++.++++.+++.+++..++.+.+.
T Consensus 3 ~~r~v~l~r~~-~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~ 81 (91)
T 1g9o_A 3 LPRLCCLEKGP-NGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLL 81 (91)
T ss_dssp CCEEEEEECBT-TBCCEEEEECTTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred ccEEEEEEeCC-CcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence 58999999988 79999998876 47999999999999999999999999999999999999999999998877777666
Q ss_pred EEEC
Q psy7774 168 AHSD 171 (173)
Q Consensus 168 v~r~ 171 (173)
+.+.
T Consensus 82 ~~~r 85 (91)
T 1g9o_A 82 VVDP 85 (91)
T ss_dssp EECC
T ss_pred EEcC
Confidence 5554
No 13
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.71 E-value=1.1e-16 Score=106.54 Aligned_cols=84 Identities=18% Similarity=0.258 Sum_probs=74.8
Q ss_pred CCCEEEEEEccCCCcccEEEEc-------cC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh
Q psy7774 88 GEPRFLMIETRKCSNLGISLVG-------GN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA 158 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~g-------g~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~ 158 (173)
..++.|.|.|.+..+|||++.+ +. ..+++|..|.+++||+++||+.||+|++|||.++.++++.++..+++
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~ 82 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIK 82 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3679999999887899999986 22 34899999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEEEEC
Q psy7774 159 KPADKVTVLAHSD 171 (173)
Q Consensus 159 ~~g~~v~l~v~r~ 171 (173)
..++.+.|+|.|.
T Consensus 83 ~~~~~v~l~v~~~ 95 (96)
T 2ego_A 83 ASGNVLRLETLYG 95 (96)
T ss_dssp HTTTEEEEEEECC
T ss_pred hCCCeEEEEEEEC
Confidence 7788999999875
No 14
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.71 E-value=1.3e-16 Score=105.20 Aligned_cols=84 Identities=30% Similarity=0.452 Sum_probs=76.9
Q ss_pred CCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
+.+.|.|.+.++.+|||.+.++. ..+++|..|.++|||+++| |+.||+|++|||.++.++++.++...++..++.+.|
T Consensus 4 ~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 83 (92)
T 2qg1_A 4 DTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTL 83 (92)
T ss_dssp CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEE
T ss_pred eEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 57889999977789999999875 5699999999999999999 999999999999999999999999888888999999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
++.|..
T Consensus 84 ~v~R~~ 89 (92)
T 2qg1_A 84 EVGRIS 89 (92)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 999874
No 15
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.71 E-value=3.6e-16 Score=116.01 Aligned_cols=115 Identities=24% Similarity=0.342 Sum_probs=98.0
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCccccCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGSPTPCNSPGTNRKSSIQHNTSTLTRTH 80 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 80 (173)
+.+++|.+++.+++.+++.|.|+|.|+....
T Consensus 68 v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~------------------------------------------------- 98 (196)
T 3gsl_A 68 VREVTHSAAVEALKEAGSIVRLYVMRRKPPA------------------------------------------------- 98 (196)
T ss_dssp CTTCCHHHHHHHHHTSCSEEEEEEEEECCCC-------------------------------------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEEecCCCc-------------------------------------------------
Confidence 3578999999999999999999998853210
Q ss_pred CCCCCCCCCCEEEEEEccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHH
Q psy7774 81 VCKDERSGEPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEE 152 (173)
Q Consensus 81 ~~~~~~~~~~~~v~l~~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~ 152 (173)
.....+.+.+.. .+|||.+.++. ..+++|..|.++|+|+++| |+.||+|++|||.++.++++.+
T Consensus 99 -------~~~~~v~l~~~~-~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~ 170 (196)
T 3gsl_A 99 -------EKVMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED 170 (196)
T ss_dssp -------EEEEEEEEEEBT-TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHH
T ss_pred -------cccEEEEEecCC-CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHH
Confidence 023567777766 69999998754 2479999999999999998 9999999999999999999999
Q ss_pred HHHHHhCCCCeEEEEEEECC
Q psy7774 153 AAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 153 ~~~~l~~~g~~v~l~v~r~~ 172 (173)
++..++..++.+.|+|.|+.
T Consensus 171 ~~~~l~~~~~~v~l~v~R~~ 190 (196)
T 3gsl_A 171 AVAALKNTYDVVYLKVAKPS 190 (196)
T ss_dssp HHHHHHSCCEEEEEEEEEES
T ss_pred HHHHHHcCCCeEEEEEeCCC
Confidence 99999999999999999874
No 16
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.71 E-value=2.7e-16 Score=103.51 Aligned_cols=84 Identities=20% Similarity=0.324 Sum_probs=75.5
Q ss_pred CCEEEEEEccCC-CcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 89 EPRFLMIETRKC-SNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~-~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
+.+.|+|.+..+ .+|||.+.++. ..+++|..|.++++|+++||+.||+|++|||..+.++++.+++..++..+..+.|
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l 85 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDL 85 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEE
T ss_pred ceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 567889988653 58999999876 5699999999999999999999999999999999999999998888888999999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
+|.|++
T Consensus 86 ~v~R~p 91 (91)
T 1m5z_A 86 VISRNP 91 (91)
T ss_dssp EEEECC
T ss_pred EEEeCc
Confidence 999863
No 17
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.71 E-value=1.5e-16 Score=107.39 Aligned_cols=84 Identities=25% Similarity=0.408 Sum_probs=76.8
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
..++.|.|.|..+.+|||.+.++. ..+++|..|.++++|+++||+.||+|++|||..+.++++.+++.+++. +..+.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v~ 92 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREIS 92 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSEE
T ss_pred CCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEEE
Confidence 468999999988789999999875 368999999999999999999999999999999999999999998887 88999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|+|..
T Consensus 93 l~v~r~~ 99 (104)
T 1wi2_A 93 MRVRFFS 99 (104)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 9999864
No 18
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.70 E-value=8.2e-17 Score=108.63 Aligned_cols=85 Identities=28% Similarity=0.447 Sum_probs=76.6
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
..++.|.+.+..+.+|||++.++. ..+++|..|.++++|++ +||+.||+|++|||.++.++++.+++.+++..++.+
T Consensus 8 ~~~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v 87 (103)
T 2dc2_A 8 GPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEI 87 (103)
T ss_dssp -CEEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEE
T ss_pred CCcEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 467889999887789999999876 34899999999999999 599999999999999999999999999999888899
Q ss_pred EEEEEECC
Q psy7774 165 TVLAHSDT 172 (173)
Q Consensus 165 ~l~v~r~~ 172 (173)
.|++.|..
T Consensus 88 ~l~v~~~~ 95 (103)
T 2dc2_A 88 EFEVVYVA 95 (103)
T ss_dssp EEEEEECC
T ss_pred EEEEEecC
Confidence 99998863
No 19
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.70 E-value=1.8e-16 Score=107.18 Aligned_cols=83 Identities=29% Similarity=0.401 Sum_probs=75.9
Q ss_pred CCEEEEEEccCCCcccEEEEccCC-------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA-------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~-------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
+.+.|.|.|.+ .+|||++.++.+ .+++|..|.++|+|+++| |+.||+|++|||.++.++++.+++..++..
T Consensus 3 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (105)
T 2awx_A 3 KIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT 81 (105)
T ss_dssp CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC
T ss_pred eEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46789999987 799999998753 489999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 82 ~~~v~l~v~R~~ 93 (105)
T 2awx_A 82 SDFVYLKVAKPT 93 (105)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEcCC
Confidence 999999999874
No 20
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.70 E-value=2.5e-16 Score=104.20 Aligned_cols=83 Identities=28% Similarity=0.393 Sum_probs=75.1
Q ss_pred CCEEEEEEccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
+.+.|+|.|.+ .+|||++.++. ..+++|..|.+++||+++| |+.||+|++|||.++.++++.+++..++..
T Consensus 3 ~~~~v~l~k~~-~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (94)
T 2fe5_A 3 TIMEVNLLKGP-KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT 81 (94)
T ss_dssp CEEEEEEECCT-TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC
T ss_pred EEEEEEEEECC-CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 56889999986 89999999875 2489999999999999999 999999999999999999999999999888
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
++.+.|+|.|+.
T Consensus 82 ~~~v~l~v~R~g 93 (94)
T 2fe5_A 82 SDMVYLKVAKPG 93 (94)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEcCC
Confidence 889999998864
No 21
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.70 E-value=1.5e-16 Score=109.73 Aligned_cols=85 Identities=27% Similarity=0.464 Sum_probs=76.0
Q ss_pred CCEEEEEEccC------CCcccEEEEccCC-------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHH
Q psy7774 89 EPRFLMIETRK------CSNLGISLVGGNA-------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAA 154 (173)
Q Consensus 89 ~~~~v~l~~~~------~~~lG~~l~gg~~-------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~ 154 (173)
..+.+.+.+.. +.+|||+|.++.. .++||..|.++++|+++| |+.||+|++|||.++.++++.+++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 91 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ 91 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 45778888865 4799999998763 279999999999999999 999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEEECCC
Q psy7774 155 YELAKPADKVTVLAHSDTN 173 (173)
Q Consensus 155 ~~l~~~g~~v~l~v~r~~~ 173 (173)
.+++..+..+.|+|+|+.+
T Consensus 92 ~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 92 SIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp HHHSCCSSCEEEEEESSCC
T ss_pred HHHhcCCCEEEEEEEECCc
Confidence 9999999999999999753
No 22
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.70 E-value=1.3e-16 Score=108.23 Aligned_cols=84 Identities=29% Similarity=0.503 Sum_probs=76.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccC----------CCCEEEEEecCCCccccc-CCCCCCEEEEECCEecCCCCHHHHHHH
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN----------AVGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYE 156 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~----------~~~i~V~~v~~gs~A~~~-gL~~gD~Il~Vng~~~~~~~~~~~~~~ 156 (173)
.+++.|+|.|.. .+|||++.++. ..++||..|.++++|+++ ||+.||+|++|||.++.++++.+++.+
T Consensus 7 ~~~~~v~l~k~~-~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 7 GKSLTLVLHRDS-GSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp SEEEEEEECCSS-SCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred cEEEEEEEEeCC-CccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 467889999874 89999999865 458999999999999998 899999999999999999999999999
Q ss_pred HhCCCCeEEEEEEECC
Q psy7774 157 LAKPADKVTVLAHSDT 172 (173)
Q Consensus 157 l~~~g~~v~l~v~r~~ 172 (173)
++..++.+.|+|.|..
T Consensus 86 ~~~~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 86 FKTAKEPIVVQVLRRT 101 (107)
T ss_dssp HHHCCSSEEEEEEECC
T ss_pred HHcCCCcEEEEEEeCC
Confidence 9888999999998863
No 23
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.70 E-value=5.2e-16 Score=116.43 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=94.7
Q ss_pred ccHHHHHHHHhhCCCe-EEEEEEeCCCccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCccccCCCC
Q psy7774 4 ATYQLAASVLRQCGNS-ITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGSPTPCNSPGTNRKSSIQHNTSTLTRTHVC 82 (173)
Q Consensus 4 ~th~~av~~L~~~g~~-v~L~V~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (173)
++|.+++.+|+.+++. |.|+|.|+....
T Consensus 83 ~~~~~~~~~~~~~~~~~v~l~v~R~~~~~--------------------------------------------------- 111 (206)
T 3r0h_A 83 MTTLKVHQLFHTTYEKAVTLTVFRADPPE--------------------------------------------------- 111 (206)
T ss_dssp SCHHHHHHHHHSCCSSEEEEEEECCSSCC---------------------------------------------------
T ss_pred cCHHHHHHHHHhcCCCceEEEEEecccCC---------------------------------------------------
Confidence 8899999999999888 999999864310
Q ss_pred CCCCCCCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCC
Q psy7774 83 KDERSGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 161 (173)
Q Consensus 83 ~~~~~~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g 161 (173)
.....+.+.+....+|||.+.++ ..+++|..|.++|+|+++| |+.||+|++|||.++.++++.+++.+++..+
T Consensus 112 -----~~~~~v~l~~~~~~~lG~~~~~~-~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 185 (206)
T 3r0h_A 112 -----LEKFNVDLMKKAGKELGLSLSPN-EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN 185 (206)
T ss_dssp -----EEEEEEEEECCTTCCCCEEEEEC-SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred -----CcEEEEEEecCCCCccCeEEEcC-CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 01344566665557899999854 3689999999999999988 9999999999999999999999999999999
Q ss_pred CeEEEEEEECC
Q psy7774 162 DKVTVLAHSDT 172 (173)
Q Consensus 162 ~~v~l~v~r~~ 172 (173)
+.+.|+|.|..
T Consensus 186 ~~v~L~V~R~~ 196 (206)
T 3r0h_A 186 GKVSMEVTRPK 196 (206)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 99999999864
No 24
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.70 E-value=2.4e-16 Score=104.84 Aligned_cols=83 Identities=22% Similarity=0.372 Sum_probs=75.5
Q ss_pred CCEEEEEEccCCCcccEEEEccC----CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~----~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
.+|.|.|.+.. .+|||.+.+.. ..+++|..|.+++||+++||+.||+|++|||..+.++++.++..+++..+..+
T Consensus 3 ~~r~v~l~k~~-~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (96)
T 2v90_A 3 KPRCLHLEKGP-QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCV 81 (96)
T ss_dssp CCEEEEEECBT-TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CCEEEEEEeCC-CcccEEEEeccCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 68999999987 79999998743 34799999999999999999999999999999999999999999998889999
Q ss_pred EEEEEECC
Q psy7774 165 TVLAHSDT 172 (173)
Q Consensus 165 ~l~v~r~~ 172 (173)
.|++.|+.
T Consensus 82 ~l~v~r~~ 89 (96)
T 2v90_A 82 SLTVVDPE 89 (96)
T ss_dssp EEEEECCC
T ss_pred EEEEECCC
Confidence 99999874
No 25
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=1.3e-16 Score=105.42 Aligned_cols=84 Identities=25% Similarity=0.475 Sum_probs=75.8
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
..++.|+|.|.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.+++.+++..++.+
T Consensus 4 ~~~r~v~l~k~~-~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (93)
T 2dkr_A 4 GSSGVVELPKTD-EGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSV 82 (93)
T ss_dssp SCSCEEEEECCT-TCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEE
T ss_pred CCCEEEEEEeCC-CCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 367999999976 89999999875 5689999999999999985 9999999999999999999999999998778899
Q ss_pred EEEEEECC
Q psy7774 165 TVLAHSDT 172 (173)
Q Consensus 165 ~l~v~r~~ 172 (173)
.|++.|+.
T Consensus 83 ~l~v~r~~ 90 (93)
T 2dkr_A 83 KLVVRSGP 90 (93)
T ss_dssp EEEECCCC
T ss_pred EEEEEeCC
Confidence 99998874
No 26
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.70 E-value=1.6e-16 Score=108.47 Aligned_cols=85 Identities=32% Similarity=0.512 Sum_probs=77.2
Q ss_pred CCCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 87 SGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 87 ~~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
+..++.|.+.+.. .+|||.+.++...+++|..|.++++|+++| |+.||+|++|||..+.++++.+++.+++..+..+.
T Consensus 13 ~~~~~~v~l~~~~-~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 91 (111)
T 2dlu_A 13 WGHVEEVELINDG-SGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVR 91 (111)
T ss_dssp CSEEEEEEEECCS-SCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEE
T ss_pred cCceEEEEEEeCC-CccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 3467889999876 899999998877899999999999999999 99999999999999999999999999987889999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|.|+.
T Consensus 92 l~v~R~~ 98 (111)
T 2dlu_A 92 MLVARDP 98 (111)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9999864
No 27
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.69 E-value=1.9e-16 Score=106.20 Aligned_cols=83 Identities=27% Similarity=0.440 Sum_probs=75.9
Q ss_pred CCEEEEEEccCCCcccEEEEccCC-------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA-------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~-------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
.++.|+|.+.+ .+|||++.++.+ .+++|..|.++++|+++| |+.||+|++|||..+.++++.+++.+++..
T Consensus 7 ~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 7 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred ccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 57889999987 899999998752 589999999999999999 999999999999999999999999999888
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 86 g~~v~l~v~R~~ 97 (101)
T 2jik_A 86 GYAVSLRVQHRL 97 (101)
T ss_dssp CSEEEEEEEEES
T ss_pred CCeEEEEEEeCC
Confidence 999999998864
No 28
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.69 E-value=4.3e-16 Score=103.52 Aligned_cols=84 Identities=32% Similarity=0.480 Sum_probs=76.5
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 161 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g 161 (173)
.++++|.|.+.. .+|||++.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.++..+++..+
T Consensus 4 g~~~~v~l~k~~-~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 4 GDIFEVELAKND-NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TCEEEEEEECSS-SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCEEEEEEEeCC-CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 367899999876 89999999875 2589999999999999999 9999999999999999999999999998889
Q ss_pred CeEEEEEEECC
Q psy7774 162 DKVTVLAHSDT 172 (173)
Q Consensus 162 ~~v~l~v~r~~ 172 (173)
..+.|++.|+.
T Consensus 83 ~~v~l~v~R~~ 93 (96)
T 1d5g_A 83 QVVHLLLEKGQ 93 (96)
T ss_dssp SEEEEEEECCS
T ss_pred CeEEEEEEcCC
Confidence 99999998864
No 29
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.69 E-value=2.3e-16 Score=104.73 Aligned_cols=84 Identities=29% Similarity=0.439 Sum_probs=75.5
Q ss_pred CCEEEEEEcc-CCCcccEEEEccC-CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 89 EPRFLMIETR-KCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~-~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
+.+.|.|.|. .+.+|||.+.++. ..+++|..|.++|||+++| |+.||+|++|||.++.++++.+++..++..+..+.
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 82 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVN 82 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred EEEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEE
Confidence 4578899985 4578999998776 5689999999999999999 99999999999999999999999999988899999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|++.|+.
T Consensus 83 l~v~R~~ 89 (95)
T 2vwr_A 83 LTIARPG 89 (95)
T ss_dssp EEEEEES
T ss_pred EEEEcCC
Confidence 9999864
No 30
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.69 E-value=2.1e-16 Score=111.01 Aligned_cols=84 Identities=23% Similarity=0.338 Sum_probs=74.4
Q ss_pred CCCEEEEEEccCCCcccEEEEccCC-----CCEEEEEecCCCccccc-CCCCCCEEEEECCEecCCCCHHHHHHHHhCCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPA 161 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~-----~~i~V~~v~~gs~A~~~-gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g 161 (173)
.+.+.|.|.|.. .+|||+|.|+.+ .++||..|.+|++|+++ ||+.||+|++|||.++.+++|++++.+++..+
T Consensus 28 ~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 106 (130)
T 1i16_A 28 ATVCTVTLEKMS-AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALP 106 (130)
T ss_dssp EEEEEEEEETTS-SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSC
T ss_pred CcEEEEEEEcCC-CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 356788999875 899999998764 58999999999999997 89999999999999999999999999998764
Q ss_pred -CeEEEEEEECC
Q psy7774 162 -DKVTVLAHSDT 172 (173)
Q Consensus 162 -~~v~l~v~r~~ 172 (173)
..+.|+|+|..
T Consensus 107 ~~~v~l~v~r~~ 118 (130)
T 1i16_A 107 DGPVTIVIRRKS 118 (130)
T ss_dssp SSEEEEEEEEES
T ss_pred CceEEEEEEeCC
Confidence 56999998863
No 31
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.69 E-value=6.3e-17 Score=106.65 Aligned_cols=84 Identities=23% Similarity=0.348 Sum_probs=74.1
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
..||.|+|.|.. .+|||.+.+.. ..+++|..|.+++||+++||+.||+|++|||.++.++++.++..+++..+..+.|
T Consensus 2 ~~pr~v~l~k~~-~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l 80 (91)
T 2vsp_A 2 MKPKLCRLAKGE-NGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTL 80 (91)
T ss_dssp CCEEEEEEECBT-TBTSCCCBCCTTCSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEE
T ss_pred CCcEEEEEEeCC-CcccEEEEeccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEE
Confidence 368999999987 69999998755 4689999999999999999999999999999999999999999999877999999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
++.|..
T Consensus 81 ~v~r~~ 86 (91)
T 2vsp_A 81 LVCGKK 86 (91)
T ss_dssp EEEC--
T ss_pred EEEeCC
Confidence 998864
No 32
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.69 E-value=2.4e-16 Score=107.16 Aligned_cols=84 Identities=23% Similarity=0.258 Sum_probs=75.3
Q ss_pred CCCEEEEEEccCCCcccEEEEccC------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC-
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK- 159 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~- 159 (173)
.+++.|.|.|.+ .+|||++.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++++++.+++.
T Consensus 14 ~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 14 PEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp SSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred CceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 367899999987 89999998863 3579999999999999988 99999999999999999999999999986
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.+..+.|+|.|..
T Consensus 93 ~~~~v~l~v~R~~ 105 (108)
T 2d92_A 93 PPGLVHLGICSGP 105 (108)
T ss_dssp CSEEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 4679999999874
No 33
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.69 E-value=4e-16 Score=105.69 Aligned_cols=84 Identities=30% Similarity=0.393 Sum_probs=75.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--------------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHH
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--------------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEA 153 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--------------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~ 153 (173)
..++.|.|.|.. .+|||++.++. ...+||..|.++++|+++||+.||+|++|||..+.++++.++
T Consensus 5 ~~~r~v~l~k~~-~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~ 83 (107)
T 3qe1_A 5 GSPRVVRIVKSE-SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQV 83 (107)
T ss_dssp -CCEEEEEECBT-TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH
T ss_pred CCcEEEEEEECC-CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH
Confidence 478999999987 69999998873 224579999999999999999999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEECC
Q psy7774 154 AYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 154 ~~~l~~~g~~v~l~v~r~~ 172 (173)
..+++..++.+.|++.|..
T Consensus 84 ~~~l~~~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 84 VDLIRAGEKELILTVLSVE 102 (107)
T ss_dssp HHHHHHCSSEEEEEEECSS
T ss_pred HHHHHcCCCEEEEEEEcCC
Confidence 9999988999999999864
No 34
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.69 E-value=3.8e-16 Score=103.55 Aligned_cols=84 Identities=24% Similarity=0.415 Sum_probs=75.2
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
.+++.+.|.+.. .+|||.+.++. ..+++|..|.+++||+++||+.||+|++|||.++.++++.++..+++..++.+.+
T Consensus 4 ~~~r~v~l~~~~-~~~G~~l~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 82 (95)
T 3r68_A 4 HQPRVVVIKKGS-NGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTL 82 (95)
T ss_dssp CCCEEEEEECBT-TBCSCEEEEC--CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CCcEEEEEecCC-CcccEEEEecCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 368999999976 89999998765 3489999999999999999999999999999999999999999999999999988
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
++.|..
T Consensus 83 ~~~r~~ 88 (95)
T 3r68_A 83 LVLDKE 88 (95)
T ss_dssp EEEECC
T ss_pred EEECCc
Confidence 887753
No 35
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.69 E-value=6.3e-17 Score=110.14 Aligned_cols=84 Identities=23% Similarity=0.371 Sum_probs=74.9
Q ss_pred CCEEEEEEccCCCcccEEEEccC----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC---
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--- 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~--- 160 (173)
++++|.|.+....+|||++.++. ..++||..|.++++|+++| |+.||+|++|||.++.++++++++.+++..
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 67899999866689999999874 4689999999999999998 999999999999999999999999999754
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..|.|+|.|..
T Consensus 85 ~~~v~l~v~R~~ 96 (108)
T 3cbz_A 85 PGPIVLTVAKSG 96 (108)
T ss_dssp SSCEEEEEECCC
T ss_pred CCeEEEEEEeCC
Confidence 567999998864
No 36
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=2.3e-16 Score=106.67 Aligned_cols=83 Identities=28% Similarity=0.525 Sum_probs=75.0
Q ss_pred CCEEEEEEccCCCcccEEEEccCC--------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA--------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~--------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
+...+.|.+.. .+|||++.++.+ .+++|..|.++++|+++| |+.||+|++|||.++.++++.+++.+++.
T Consensus 7 ~~~~v~l~~~~-~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 85 (105)
T 1wha_A 7 GRHVACLARSE-RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA 85 (105)
T ss_dssp EEEEEEECCCT-TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS
T ss_pred eeEEEEEEeCC-CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45678888866 789999998753 589999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.+..+.|+|.|+.
T Consensus 86 ~g~~v~l~v~R~~ 98 (105)
T 1wha_A 86 ASPTIALLLEREA 98 (105)
T ss_dssp CCSCEEEEEEECC
T ss_pred CCCeEEEEEEECC
Confidence 8999999999974
No 37
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.68 E-value=6.7e-16 Score=102.96 Aligned_cols=83 Identities=35% Similarity=0.508 Sum_probs=75.7
Q ss_pred CCEEEEEEccCCCcccEEEEccCC---CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~---~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
+++.|.+.+.. .+|||++.++.+ .+++|..|.+++||+++| |+.||+|++|||.++.++++.+++..++..+..+
T Consensus 4 ~~~~v~l~~~~-~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (98)
T 2opg_A 4 CETTIEISKGR-TGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRV 82 (98)
T ss_dssp EEEEEEEECBT-TBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred CEEEEEEEECC-CcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 56889999876 899999998764 589999999999999999 9999999999999999999999999998888999
Q ss_pred EEEEEECC
Q psy7774 165 TVLAHSDT 172 (173)
Q Consensus 165 ~l~v~r~~ 172 (173)
.|+|.|+.
T Consensus 83 ~l~v~R~~ 90 (98)
T 2opg_A 83 RLTLYRDE 90 (98)
T ss_dssp EEEEEECS
T ss_pred EEEEEcCC
Confidence 99999864
No 38
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.68 E-value=3.3e-16 Score=105.26 Aligned_cols=83 Identities=23% Similarity=0.376 Sum_probs=75.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
+.+.|.|.+.. .+|||++.++. ..+++|..|.+++||+++| |+.||+|++|||.++.++++.+++..++..
T Consensus 4 ~~~~v~l~k~~-~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 82 (102)
T 2i1n_A 4 KYEEIVLERGN-SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEA 82 (102)
T ss_dssp EEEEEEEECBT-TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred eEEEEEEEECC-CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46789999876 89999999875 3589999999999999999 999999999999999999999999999888
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 83 g~~v~l~v~R~~ 94 (102)
T 2i1n_A 83 GPVVRLVVRRRQ 94 (102)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 999999999864
No 39
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=1.3e-16 Score=110.06 Aligned_cols=84 Identities=32% Similarity=0.492 Sum_probs=75.9
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 161 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g 161 (173)
.+++.|+|.|.. .+|||++.++. ..+++|..|.++|||+++| |+.||+|++|||.++.++++.+++..++..+
T Consensus 24 ~~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 102 (117)
T 2fne_A 24 PQCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK 102 (117)
T ss_dssp CEEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 367889999987 89999999875 3489999999999999988 9999999999999999999999999998888
Q ss_pred CeEEEEEEECC
Q psy7774 162 DKVTVLAHSDT 172 (173)
Q Consensus 162 ~~v~l~v~r~~ 172 (173)
+.+.|+|.|..
T Consensus 103 ~~v~l~v~R~g 113 (117)
T 2fne_A 103 GTVTLMVLSSD 113 (117)
T ss_dssp SSEEEEEEECS
T ss_pred CeEEEEEEeCC
Confidence 88999999874
No 40
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.68 E-value=1e-16 Score=112.14 Aligned_cols=85 Identities=26% Similarity=0.391 Sum_probs=77.2
Q ss_pred CCCEEEEEEccCCCcccEEEEccCC-----CCEEEEEecCCCcccccC-CCCCCEEEEECCEecC-CCCHHHHHHHHhCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLR-AATAEEAAYELAKP 160 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~-----~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~-~~~~~~~~~~l~~~ 160 (173)
.+++.|.|.+..+.+|||.+.++.. .++||..|.++++|+++| |+.||+|++|||.++. ++++.+++.+++..
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 24 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp CEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred CceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 4678899999876899999988653 389999999999999999 9999999999999997 99999999999888
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..|.|+|.|+.
T Consensus 104 ~~~v~l~v~r~~ 115 (128)
T 2db5_A 104 TGSLRLIVAREP 115 (128)
T ss_dssp CSEEEEEEEECC
T ss_pred CCeEEEEEEcCC
Confidence 999999999874
No 41
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.68 E-value=2e-16 Score=105.73 Aligned_cols=84 Identities=20% Similarity=0.307 Sum_probs=75.8
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
-++.|.|.|..+.+|||.+......+++|..|.+++||+++| |++||+|++|||.++.+++++++..+++..++.+.|+
T Consensus 12 ~~~~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~ 91 (97)
T 2ejy_A 12 MVRLIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLK 91 (97)
T ss_dssp -CEEEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEE
T ss_pred ccEEEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 478999999888999999987666799999999999999999 9999999999999999999999999998778899999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
|.+..
T Consensus 92 V~~~~ 96 (97)
T 2ejy_A 92 VIPNQ 96 (97)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 88653
No 42
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.68 E-value=7.7e-16 Score=104.30 Aligned_cols=84 Identities=19% Similarity=0.286 Sum_probs=76.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccCC--------CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNA--------VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~--------~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
.+++.|.|.|.++.+|||++.++.+ .+++|..|.+++||+ +||++||+|++|||.++.++++.+++..++.
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRK 84 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhC
Confidence 4678899999877899999998653 489999999999999 9999999999999999999999999888888
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.+..+.|+|.|+.
T Consensus 85 ~g~~v~l~v~R~~ 97 (107)
T 2h2b_A 85 SGKNAKITIRRKK 97 (107)
T ss_dssp CCSEEEEEEEEES
T ss_pred CCCEEEEEEEECC
Confidence 8999999998864
No 43
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=4.4e-16 Score=107.40 Aligned_cols=85 Identities=28% Similarity=0.331 Sum_probs=77.2
Q ss_pred CCCEEEEEEccCCCcccEEEEccCC---CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCe
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADK 163 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~---~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~ 163 (173)
..++.|.|.+..+.+|||.+.++.. .++||..|.++++|+++| |++||+|++|||..+.++++++++.+++..+..
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 93 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEK 93 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSE
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4689999999877899999988642 459999999999999998 999999999999999999999999999989999
Q ss_pred EEEEEEECC
Q psy7774 164 VTVLAHSDT 172 (173)
Q Consensus 164 v~l~v~r~~ 172 (173)
+.|+|.|..
T Consensus 94 v~l~v~r~~ 102 (117)
T 1v62_A 94 VRLEILPVP 102 (117)
T ss_dssp EEEEECCBT
T ss_pred EEEEEEECC
Confidence 999998864
No 44
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=4.5e-16 Score=107.37 Aligned_cols=82 Identities=28% Similarity=0.366 Sum_probs=75.2
Q ss_pred CCEEEEEEccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
+.+.|.+.++. .+|||++.++. ..+++|..|.++|+|+++| |+.||+|++|||.++.++++.+++.+++..
T Consensus 24 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 102 (117)
T 2byg_A 24 TVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT 102 (117)
T ss_dssp EEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 56788898887 89999999874 3489999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEEEC
Q psy7774 161 ADKVTVLAHSD 171 (173)
Q Consensus 161 g~~v~l~v~r~ 171 (173)
+..|.|+|.|.
T Consensus 103 g~~v~l~v~R~ 113 (117)
T 2byg_A 103 SEVVYLKVGKP 113 (117)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEeC
Confidence 99999999986
No 45
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.68 E-value=2.1e-16 Score=103.83 Aligned_cols=83 Identities=17% Similarity=0.357 Sum_probs=73.9
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC--CCe
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--ADK 163 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~--g~~ 163 (173)
+++.|.|.+.. .+|||.+.++. ..+++|..|.++|||+++| |+.||+|++|||.++.++++.++...++.. +..
T Consensus 2 ~~~~v~l~~~~-~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~ 80 (90)
T 2q9v_A 2 MEQDIFLWRKE-TGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGH 80 (90)
T ss_dssp EEEEEEEECBT-TBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTE
T ss_pred CcEEEEEEECC-CccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCe
Confidence 46889999987 89999999875 3579999999999999999 999999999999999999999999988765 448
Q ss_pred EEEEEEECC
Q psy7774 164 VTVLAHSDT 172 (173)
Q Consensus 164 v~l~v~r~~ 172 (173)
+.|+|.|..
T Consensus 81 v~l~v~R~~ 89 (90)
T 2q9v_A 81 VNLTVRQTR 89 (90)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 999998863
No 46
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.68 E-value=4.7e-16 Score=108.33 Aligned_cols=83 Identities=23% Similarity=0.322 Sum_probs=76.3
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
.++.+++.+....+|||++.++. ..+++|..|.+|++|+++| |+.||+|++|||.++.++++.+++.+++..++.+.
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~ 98 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 98 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 56889999988789999999886 4689999999999999999 99999999999999999999999999998888899
Q ss_pred EEEEEC
Q psy7774 166 VLAHSD 171 (173)
Q Consensus 166 l~v~r~ 171 (173)
|+++|.
T Consensus 99 l~v~r~ 104 (125)
T 3hpk_A 99 IHYNKL 104 (125)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999884
No 47
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.68 E-value=2.8e-16 Score=106.49 Aligned_cols=84 Identities=17% Similarity=0.347 Sum_probs=75.3
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC--CCCCCEEEEECCEecCCCCHHHHHHHHhCCCC-
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG--LRTGDRILEYNGTDLRAATAEEAAYELAKPAD- 162 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g--L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~- 162 (173)
...+.+.|.+....+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++.+++..++
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~ 95 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCER 95 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGS
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcccc
Confidence 357889998887789999999876 3479999999999999999 99999999999999999999999999988765
Q ss_pred ---eEEEEEEEC
Q psy7774 163 ---KVTVLAHSD 171 (173)
Q Consensus 163 ---~v~l~v~r~ 171 (173)
.+.|+|+|+
T Consensus 96 ~~~~v~l~v~r~ 107 (107)
T 3nfk_A 96 HSGELMLLVRPN 107 (107)
T ss_dssp BTTBEEEEEECC
T ss_pred CCcEEEEEEEcC
Confidence 999999874
No 48
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=6.1e-16 Score=106.11 Aligned_cols=85 Identities=19% Similarity=0.240 Sum_probs=76.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccCC---------CCEEEEEecCCCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNA---------VGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYEL 157 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~---------~~i~V~~v~~gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l 157 (173)
.+++.|.+.+....+|||.|.++.. .+++|..|.++++|++ +||+.||+|++|||..+.++++.++..++
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l 88 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLI 88 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4789999998766899999987641 2679999999999999 99999999999999999999999999999
Q ss_pred hCCCCeEEEEEEECC
Q psy7774 158 AKPADKVTVLAHSDT 172 (173)
Q Consensus 158 ~~~g~~v~l~v~r~~ 172 (173)
+..+..+.|+|.|..
T Consensus 89 ~~~g~~v~l~v~r~~ 103 (114)
T 1uew_A 89 KDAGLSVTLRIIPQE 103 (114)
T ss_dssp HHTTTEEEEEECCCS
T ss_pred HcCCCeEEEEEEeCC
Confidence 888999999998864
No 49
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=4.4e-16 Score=105.00 Aligned_cols=84 Identities=17% Similarity=0.256 Sum_probs=75.7
Q ss_pred CCCEEEEEEccCCCcccEEEEccC----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPAD 162 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~ 162 (173)
.+++.+.|.+.. .+|||.+.++. ..+++|..|.+++||+++| |+.||+|++|||..+.++++.+++.+++..+.
T Consensus 10 ~~~~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 88 (104)
T 2djt_A 10 SGHFSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGP 88 (104)
T ss_dssp CCCEEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCS
T ss_pred CceEEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 467889999877 79999999864 4689999999999999999 99999999999999999999999988887899
Q ss_pred eEEEEEEECC
Q psy7774 163 KVTVLAHSDT 172 (173)
Q Consensus 163 ~v~l~v~r~~ 172 (173)
.+.|+|.|+.
T Consensus 89 ~v~l~v~R~g 98 (104)
T 2djt_A 89 QLHLVIRRPL 98 (104)
T ss_dssp EEEEEECCCC
T ss_pred eEEEEEEECC
Confidence 9999998864
No 50
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.67 E-value=1.3e-16 Score=103.38 Aligned_cols=82 Identities=22% Similarity=0.334 Sum_probs=74.2
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
.++.|.|.+.. .+|||.+.++ .+++|..|.++++|+++||+.||+|++|||.++.++++.++...++..++.+.|++
T Consensus 2 ~~r~v~l~~~~-~g~G~~~~~~--~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v 78 (83)
T 2kv8_A 2 RVRSVEVARGR-AGYGFTLSGQ--APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVI 78 (83)
T ss_dssp CEEEEEECCCS-SCCSCBCCCS--SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEE
T ss_pred CcEEEEEEeCC-CcccEEEEcC--CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 57899999987 8999998764 37999999999999999999999999999999999999999999988888899999
Q ss_pred EECCC
Q psy7774 169 HSDTN 173 (173)
Q Consensus 169 ~r~~~ 173 (173)
.|+++
T Consensus 79 ~R~~g 83 (83)
T 2kv8_A 79 AEGVG 83 (83)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 99763
No 51
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.67 E-value=7e-16 Score=100.88 Aligned_cols=82 Identities=18% Similarity=0.318 Sum_probs=72.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
.+..|.+ +++ .+|||++.++. ..+++|..|.+++||+++||+.||+|++|||.++.++++.++..+++..+..+.|
T Consensus 3 ~~~~v~l-~~~-~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (88)
T 2uzc_A 3 SNYSVSL-VGP-APWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNM 80 (88)
T ss_dssp CEEEEEE-ESS-SCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEE
T ss_pred cEEEEEE-cCC-CcccEEEECcCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 3566777 444 79999999876 4579999999999999999999999999999999999999999888878999999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
++.|+.
T Consensus 81 ~v~R~g 86 (88)
T 2uzc_A 81 TLQRES 86 (88)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 999864
No 52
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.67 E-value=4.1e-16 Score=104.01 Aligned_cols=84 Identities=24% Similarity=0.416 Sum_probs=75.2
Q ss_pred CCEEEEEEccCCCcccEEEEccC--------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
.++.|+|.|....+|||++.++. ..+++|..|.+++||+++| |+.||+|++|||..+.++++.++..+++.
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 36789999966689999998865 2389999999999999999 99999999999999999999999999988
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.+..+.|+|.|+.
T Consensus 85 ~g~~v~l~v~R~g 97 (98)
T 1ihj_A 85 ADFKIELEIQTFD 97 (98)
T ss_dssp SCSEEEEEEEEC-
T ss_pred CCCeEEEEEEeCC
Confidence 9999999999974
No 53
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.67 E-value=3.3e-16 Score=105.97 Aligned_cols=82 Identities=26% Similarity=0.340 Sum_probs=75.7
Q ss_pred CEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
|+.+.|.+.++.+|||.+..+. ..+++|..|.++|||+++||+.||+|++|||.++.++++.+++..++..++.+.|++
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v 81 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLV 81 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTCCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEE
Confidence 6889999988889999998765 458999999999999999999999999999999999999999999988899999999
Q ss_pred EEC
Q psy7774 169 HSD 171 (173)
Q Consensus 169 ~r~ 171 (173)
.|.
T Consensus 82 ~r~ 84 (106)
T 3ngh_A 82 LDG 84 (106)
T ss_dssp ECH
T ss_pred EEC
Confidence 875
No 54
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.67 E-value=3.5e-16 Score=104.11 Aligned_cols=83 Identities=23% Similarity=0.382 Sum_probs=74.7
Q ss_pred CCEEEEEEccCCCcccEEEEccC------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 161 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g 161 (173)
+...|.+.+.. .+|||++.++. ..+++|..|.+++||+++| |++||+|++|||.++.++++.++..+++..+
T Consensus 3 ~~~~v~l~k~~-~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 81 (97)
T 2jil_A 3 RTVEVTLHKEG-NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 81 (97)
T ss_dssp EEEEEEEECBT-TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred eEEEEEEEeCC-CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35678888865 89999999875 3589999999999999999 9999999999999999999999999998899
Q ss_pred CeEEEEEEECC
Q psy7774 162 DKVTVLAHSDT 172 (173)
Q Consensus 162 ~~v~l~v~r~~ 172 (173)
..+.|+|.|+.
T Consensus 82 ~~v~l~v~R~~ 92 (97)
T 2jil_A 82 QEAALLIEYDV 92 (97)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEeCC
Confidence 99999999864
No 55
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.67 E-value=4.5e-16 Score=105.55 Aligned_cols=76 Identities=32% Similarity=0.465 Sum_probs=67.8
Q ss_pred ccCCCcccEEEEccCC-------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 97 TRKCSNLGISLVGGNA-------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 97 ~~~~~~lG~~l~gg~~-------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
.....+|||++.||.+ .+++|..|.++++|+++| |+.||+|++|||.++.++++.+++..++..++.+.|+|
T Consensus 9 ~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v 88 (106)
T 4amh_A 9 PRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKV 88 (106)
T ss_dssp ---CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEE
T ss_pred CCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Confidence 3345899999999863 289999999999999999 99999999999999999999999999999999999999
Q ss_pred EECC
Q psy7774 169 HSDT 172 (173)
Q Consensus 169 ~r~~ 172 (173)
.|+.
T Consensus 89 ~R~~ 92 (106)
T 4amh_A 89 AKPG 92 (106)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 9864
No 56
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.67 E-value=8e-16 Score=101.36 Aligned_cols=81 Identities=22% Similarity=0.277 Sum_probs=73.6
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
.++.|.|.++. .+|||.+.+. .+++|..|.++++|+++||+.||+|++|||..+.++++.++..+++..++.+.|++
T Consensus 3 ~~r~v~l~~~~-~g~G~~l~~~--~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v 79 (91)
T 2f5y_A 3 RYRQITIPRGK-DGFGFTICCD--SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLV 79 (91)
T ss_dssp EEEEEEEECBT-TBTSEEEECS--SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEE
T ss_pred ceEEEEEEeCC-CCccEEEecC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 57889999977 7899999864 46999999999999999999999999999999999999999999988888999999
Q ss_pred EECC
Q psy7774 169 HSDT 172 (173)
Q Consensus 169 ~r~~ 172 (173)
.|+.
T Consensus 80 ~R~~ 83 (91)
T 2f5y_A 80 WRMV 83 (91)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9864
No 57
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.67 E-value=3.2e-16 Score=106.27 Aligned_cols=83 Identities=29% Similarity=0.467 Sum_probs=74.6
Q ss_pred CCEEEEEEccCCCcccEEEEc---cC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 89 EPRFLMIETRKCSNLGISLVG---GN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~g---g~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
+.+.|.|.+.. .+|||++.+ +. ..++||..|.++++|+++| |+.||+|++|||.++.++++.+++.+++.
T Consensus 9 ~~~~v~l~k~~-~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 87 (107)
T 1wf8_A 9 ELFPVELEKDE-DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN 87 (107)
T ss_dssp EEEEEEEECBT-TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH
T ss_pred eEEEEEEEECC-CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 56778888876 799999998 22 4589999999999999999 99999999999999999999999999988
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.+..+.|+|.|+.
T Consensus 88 ~~~~v~l~v~R~~ 100 (107)
T 1wf8_A 88 TKGNVRFVIGREK 100 (107)
T ss_dssp CCSEEEEEEEEEC
T ss_pred CCCeEEEEEEeCC
Confidence 8999999999864
No 58
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.67 E-value=9.6e-16 Score=104.85 Aligned_cols=83 Identities=23% Similarity=0.360 Sum_probs=75.9
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
.+++.|.|.+.. .+|||++.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++..++..+..+
T Consensus 23 ~~~~~v~l~~~~-~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v 101 (112)
T 2r4h_A 23 MDFYTVELERGA-KGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRV 101 (112)
T ss_dssp CCEEEEEEECBT-TBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred CceEEEEEEcCC-CccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 367889999876 78999999875 5689999999999999999 9999999999999999999999999998889999
Q ss_pred EEEEEEC
Q psy7774 165 TVLAHSD 171 (173)
Q Consensus 165 ~l~v~r~ 171 (173)
.|+|.|+
T Consensus 102 ~l~v~R~ 108 (112)
T 2r4h_A 102 RLFLKRG 108 (112)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999886
No 59
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=4.3e-16 Score=107.81 Aligned_cols=82 Identities=27% Similarity=0.450 Sum_probs=75.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
.++.|.|.|.. .+|||++.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++.+++..
T Consensus 17 ~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 95 (120)
T 2eno_A 17 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 95 (120)
T ss_dssp EEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH
T ss_pred ceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 57889999987 89999999865 3589999999999999999 999999999999999999999999999878
Q ss_pred CCeEEEEEEEC
Q psy7774 161 ADKVTVLAHSD 171 (173)
Q Consensus 161 g~~v~l~v~r~ 171 (173)
+..+.|+|.|+
T Consensus 96 g~~v~l~v~R~ 106 (120)
T 2eno_A 96 GYAVSLRVQHR 106 (120)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEeC
Confidence 89999999886
No 60
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.67 E-value=1.4e-15 Score=104.17 Aligned_cols=83 Identities=20% Similarity=0.332 Sum_probs=75.1
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCC-CCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGL-RTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL-~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
.++.|.+.|....+|||.+.+. ..+++|..|.++++|+++|| +.||+|++|||..+.++++.++..+++..++.+.|+
T Consensus 25 ~~~~v~l~k~~~~~lG~~i~~~-~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 103 (113)
T 1va8_A 25 TVKIVRIEKARDIPLGATVRNE-MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFV 103 (113)
T ss_dssp ECEEEEEEECTTCCCCEEEEEC-SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEE
T ss_pred ceEEEEEEeCCCCceeEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 5788999998866999999865 56899999999999999998 999999999999999999999999998777899999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
|.|..
T Consensus 104 v~r~~ 108 (113)
T 1va8_A 104 LIPSS 108 (113)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 98763
No 61
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.67 E-value=4.9e-16 Score=104.44 Aligned_cols=83 Identities=23% Similarity=0.383 Sum_probs=75.5
Q ss_pred CCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
.++.|+|.+.. .+|||.+.++. ..+++|..|.+++||+++||+.||+|++|||..+.++++.+++..++..++.+.|+
T Consensus 6 ~~r~v~l~k~~-~g~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 84 (102)
T 2d90_A 6 SGRVVVIKKGS-NGYGFYLRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLL 84 (102)
T ss_dssp SSEEEEEECCS-SSSSCEEEECSSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEE
T ss_pred CCEEEEEeeCC-CCccEEEEeecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 68999999977 79999998764 56899999999999999999999999999999999999999998888789999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
+.|+.
T Consensus 85 v~r~~ 89 (102)
T 2d90_A 85 VLDKE 89 (102)
T ss_dssp ECSTT
T ss_pred EEECC
Confidence 98753
No 62
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.67 E-value=2.1e-16 Score=108.94 Aligned_cols=83 Identities=20% Similarity=0.299 Sum_probs=74.9
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
.+++.|.|.+..+.+|||++.++. ..+++|..|.++++|+ ++|+.||+|++|||.++.++++.+++.+++.
T Consensus 13 ~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~ 91 (117)
T 2csj_A 13 WEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK 91 (117)
T ss_dssp EEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH
T ss_pred ceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc
Confidence 357889999887789999999875 3479999999999997 8899999999999999999999999999988
Q ss_pred CCCeEEEEEEEC
Q psy7774 160 PADKVTVLAHSD 171 (173)
Q Consensus 160 ~g~~v~l~v~r~ 171 (173)
.+..+.|+|.|.
T Consensus 92 ~~~~v~l~v~R~ 103 (117)
T 2csj_A 92 SGKIAAIVVKRP 103 (117)
T ss_dssp SCSEEEEEEEEE
T ss_pred CCCeEEEEEEEC
Confidence 899999999885
No 63
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.67 E-value=7.8e-16 Score=101.78 Aligned_cols=83 Identities=19% Similarity=0.306 Sum_probs=74.6
Q ss_pred CCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
..+.|.+.|.+ .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++.+++..++.+.|
T Consensus 4 ~~r~v~l~k~~-~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 82 (93)
T 3o46_A 4 SVKIIRLVKNR-EPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITF 82 (93)
T ss_dssp CCEEEEEEESS-SCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEE
T ss_pred cEEEEEEEeCC-CCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEE
Confidence 46889999976 79999998764 4689999999999999998 999999999999999999999999999888789999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
+|.+..
T Consensus 83 ~v~~~~ 88 (93)
T 3o46_A 83 KIIPGS 88 (93)
T ss_dssp EEECC-
T ss_pred EEEeCC
Confidence 998753
No 64
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.66 E-value=2.1e-16 Score=108.78 Aligned_cols=85 Identities=29% Similarity=0.454 Sum_probs=77.6
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecC-CCCHHHHHHHHhCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLR-AATAEEAAYELAKP 160 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~-~~~~~~~~~~l~~~ 160 (173)
..++.|.|.+..+.+|||++.++. ..+++|..|.++|+|+++| |+.||+|++|||..+. ++++.+++.+++..
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 468999999987789999998865 3589999999999999999 9999999999999998 99999999999888
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 99 ~~~v~l~v~R~~ 110 (117)
T 2o2t_A 99 KDTVQLVIARGS 110 (117)
T ss_dssp CSEEEEEEESSC
T ss_pred CCEEEEEEEeCC
Confidence 999999999874
No 65
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.66 E-value=2.5e-16 Score=106.17 Aligned_cols=84 Identities=15% Similarity=0.236 Sum_probs=74.8
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC--CC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--AD 162 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~--g~ 162 (173)
.+++.+.|.+.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++.+++.. +.
T Consensus 8 ~~~~~v~l~~~~-~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~ 86 (103)
T 1uep_A 8 YKELDVHLRRME-SGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNG 86 (103)
T ss_dssp EEEECCEEESSS-SSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHT
T ss_pred ceEEEEEEEeCC-CccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 356778898865 89999999865 4689999999999999999 999999999999999999999999999865 89
Q ss_pred eEEEEEEECC
Q psy7774 163 KVTVLAHSDT 172 (173)
Q Consensus 163 ~v~l~v~r~~ 172 (173)
.|.|+|.|+.
T Consensus 87 ~v~l~v~R~~ 96 (103)
T 1uep_A 87 QVNLTVRRKV 96 (103)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEeCC
Confidence 9999999863
No 66
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.66 E-value=9.4e-16 Score=104.30 Aligned_cols=83 Identities=22% Similarity=0.413 Sum_probs=74.5
Q ss_pred CCEEEEEEccCCCcccEEEEccCC--------------CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHH
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA--------------VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAA 154 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~--------------~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~ 154 (173)
+++.+.|.+....+|||.+.++.. .+++|..|.++++|+++||+.||+|++|||..+.++++.+++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~ 86 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV 86 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 568899987667899999998763 279999999999999999999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEEEC
Q psy7774 155 YELAKPADKVTVLAHSD 171 (173)
Q Consensus 155 ~~l~~~g~~v~l~v~r~ 171 (173)
.+++..+..+.|+|.|.
T Consensus 87 ~~l~~~~~~v~l~v~~~ 103 (109)
T 1q3o_A 87 NMIRQGGNTLMVKVVMV 103 (109)
T ss_dssp HHHHHTTTEEEEEEEEE
T ss_pred HHHHhCCCEEEEEEEEC
Confidence 99987789999998875
No 67
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.66 E-value=1.2e-16 Score=109.15 Aligned_cols=84 Identities=35% Similarity=0.413 Sum_probs=76.2
Q ss_pred CCEEEEEEccCCCcccEEEEccC-----------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHH
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-----------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYE 156 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-----------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~ 156 (173)
..+.|.|.+..+.+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++.+
T Consensus 9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 46779999987789999999875 2479999999999999999 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEECC
Q psy7774 157 LAKPADKVTVLAHSDT 172 (173)
Q Consensus 157 l~~~g~~v~l~v~r~~ 172 (173)
++..+..+.|+|.|..
T Consensus 89 l~~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 89 LRSVGDTLTVLVCDGF 104 (111)
T ss_dssp HSSCSSEEEECCCCCC
T ss_pred HHcCCCeEEEEEEECC
Confidence 9989999999998763
No 68
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.66 E-value=1.5e-15 Score=104.85 Aligned_cols=85 Identities=38% Similarity=0.636 Sum_probs=77.3
Q ss_pred CCCCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCe
Q psy7774 86 RSGEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADK 163 (173)
Q Consensus 86 ~~~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~ 163 (173)
...+++.|.|.+.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.+++..++..+..
T Consensus 11 ~~~~~~~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 89 (119)
T 1tp5_A 11 IPREPRRIVIHRGS-TGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 89 (119)
T ss_dssp CCCSCEEEEEECTT-SCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CCCccEEEEEEECC-CCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 44578999999977 78999999876 4689999999999999999 999999999999999999999998888889999
Q ss_pred EEEEEEEC
Q psy7774 164 VTVLAHSD 171 (173)
Q Consensus 164 v~l~v~r~ 171 (173)
+.|++.|+
T Consensus 90 v~l~v~r~ 97 (119)
T 1tp5_A 90 VTIIAQYK 97 (119)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99999886
No 69
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.66 E-value=1.6e-15 Score=103.27 Aligned_cols=84 Identities=31% Similarity=0.436 Sum_probs=76.2
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA 161 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g 161 (173)
.+.+.|.|.+.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++..++..+
T Consensus 7 ~~~~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 85 (110)
T 1um1_A 7 GYVFTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG 85 (110)
T ss_dssp CCEEEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred CcEEEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 367889999877 79999999864 3589999999999999999 9999999999999999999999999999889
Q ss_pred CeEEEEEEECC
Q psy7774 162 DKVTVLAHSDT 172 (173)
Q Consensus 162 ~~v~l~v~r~~ 172 (173)
..+.|+|.|+.
T Consensus 86 ~~v~l~v~R~~ 96 (110)
T 1um1_A 86 KKMRFLVAKSD 96 (110)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEeCC
Confidence 99999999864
No 70
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.66 E-value=1e-15 Score=103.54 Aligned_cols=82 Identities=28% Similarity=0.461 Sum_probs=72.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPAD 162 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~ 162 (173)
+...|.+ +.. .+|||++.++. ..+++|..|.++|+|+++| |+.||+|++|||.++.++++.+++..++..+.
T Consensus 11 ~~~~v~l-~~~-~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 88 (106)
T 3axa_A 11 EIITVTL-KKQ-NGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSS 88 (106)
T ss_dssp CEEEEEE-ECS-SSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred eEEEEEE-CCC-CccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4566667 544 89999998752 4589999999999999999 99999999999999999999999999988999
Q ss_pred eEEEEEEECC
Q psy7774 163 KVTVLAHSDT 172 (173)
Q Consensus 163 ~v~l~v~r~~ 172 (173)
.+.|+|.|+.
T Consensus 89 ~v~l~v~R~~ 98 (106)
T 3axa_A 89 VVTLEVAKQG 98 (106)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEeCC
Confidence 9999999864
No 71
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.66 E-value=1.3e-15 Score=99.38 Aligned_cols=81 Identities=22% Similarity=0.297 Sum_probs=71.3
Q ss_pred EEEEEccCCCcccEEEEccCC--CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEE
Q psy7774 92 FLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAH 169 (173)
Q Consensus 92 ~v~l~~~~~~~lG~~l~gg~~--~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~ 169 (173)
++++.+....+|||.+.++.+ .+++|..|.+++||+++||+.||+|++|||.++.++++.++..+++..+..+.|++.
T Consensus 3 ~~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~ 82 (87)
T 2pa1_A 3 ALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLD 82 (87)
T ss_dssp EEEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEE
T ss_pred EEEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 345555455899999998763 589999999999999999999999999999999999999999999877799999999
Q ss_pred ECC
Q psy7774 170 SDT 172 (173)
Q Consensus 170 r~~ 172 (173)
|+.
T Consensus 83 R~~ 85 (87)
T 2pa1_A 83 RIT 85 (87)
T ss_dssp ECC
T ss_pred ecC
Confidence 974
No 72
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.66 E-value=9.4e-16 Score=100.52 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=71.0
Q ss_pred CEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
+..+.+.. ..+|||++.++. ..+++|..|.+++||+++||+.||+|++|||.++.++++.++...++..+..+.|+
T Consensus 4 ~~~v~~~~--~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 81 (89)
T 2q3g_A 4 SFKVVLEG--PAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLG 81 (89)
T ss_dssp EEEEEEES--SSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEE
T ss_pred EEEEEEcC--CCcccEEEECcCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEE
Confidence 35566653 379999999876 45799999999999999999999999999999999999999999998889999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
+.|+.
T Consensus 82 v~R~~ 86 (89)
T 2q3g_A 82 LSRAI 86 (89)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 98864
No 73
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.66 E-value=2.7e-15 Score=99.23 Aligned_cols=81 Identities=25% Similarity=0.427 Sum_probs=72.3
Q ss_pred CCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
..+|.|.|.+.. .+|||.+.+. .+++|..|.+++||+++||+.||+|++|||..+.++++.+++..++ .++.+.|+
T Consensus 7 ~~~r~v~l~~~~-~~~G~~l~~~--~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~v~l~ 82 (93)
T 2dls_A 7 GVQRCVIIQKDQ-HGFGFTVSGD--RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAYVALT 82 (93)
T ss_dssp CCEEEEEEECSS-SSCCEEEECS--SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT-SSSEEEEE
T ss_pred CCCEEEEEEeCC-CceeEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc-CCCEEEEE
Confidence 367889999877 8999999863 5799999999999999999999999999999999999988877776 69999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
|.|+.
T Consensus 83 v~R~~ 87 (93)
T 2dls_A 83 LLGSS 87 (93)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 99874
No 74
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.66 E-value=1.9e-15 Score=101.53 Aligned_cols=84 Identities=21% Similarity=0.263 Sum_probs=74.0
Q ss_pred CCEEEEEEccCCCcccEEEEccCC----CCEEEEEecCCCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHHhC--CC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA----VGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAK--PA 161 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~----~~i~V~~v~~gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g 161 (173)
+.+.|.+.+..+.+|||.+.+... .+++|..|.++++|++ ++|+.||+|++|||..+.+.++.++..+++. .+
T Consensus 9 ~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g 88 (101)
T 2yt7_A 9 NCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQ 88 (101)
T ss_dssp CCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTS
T ss_pred ceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 578899998777899999975332 2699999999999999 6799999999999999999999999999975 78
Q ss_pred CeEEEEEEECC
Q psy7774 162 DKVTVLAHSDT 172 (173)
Q Consensus 162 ~~v~l~v~r~~ 172 (173)
..+.|+|.|.+
T Consensus 89 ~~v~l~v~R~~ 99 (101)
T 2yt7_A 89 TSVTLSIVHCP 99 (101)
T ss_dssp SEEEEEECCCC
T ss_pred CeEEEEEEeCC
Confidence 99999998864
No 75
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.66 E-value=2.6e-15 Score=99.88 Aligned_cols=83 Identities=20% Similarity=0.240 Sum_probs=74.9
Q ss_pred CCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
.+...+.+.+....+|||.+.+ ...+++|..|.++|+|+++| |+.||+|++|||.++.++++.+++..++..++.+.|
T Consensus 7 ~~~~~v~l~~~~~~glG~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l 85 (96)
T 2qkv_A 7 LEKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSM 85 (96)
T ss_dssp CCCEEEEEECBTTBCCCEEEEE-CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEE
T ss_pred CceEEEEEEeCCCCCccEEEEe-CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEE
Confidence 3567888987666899999876 45689999999999999999 999999999999999999999999999998899999
Q ss_pred EEEEC
Q psy7774 167 LAHSD 171 (173)
Q Consensus 167 ~v~r~ 171 (173)
+|.|.
T Consensus 86 ~v~R~ 90 (96)
T 2qkv_A 86 EVTRP 90 (96)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99986
No 76
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.66 E-value=1.9e-15 Score=100.66 Aligned_cols=83 Identities=27% Similarity=0.363 Sum_probs=73.9
Q ss_pred CCEEEEEEccCCCcccEEEEccCC--CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~--~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
+.+.|.+.+.. .+|||.+.++.. .+++|..|.++++|+++| |+.||+|++|||..+.++++.++..+++..+..+.
T Consensus 5 ~~~~v~l~~~~-~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~ 83 (97)
T 1n7e_A 5 IIYTVELKRYG-GPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVT 83 (97)
T ss_dssp CEEEEEEECTT-SCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEE
T ss_pred eEEEEEEEeCC-CCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 45778887654 789999998763 689999999999999999 99999999999999999999999999988899999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|.|..
T Consensus 84 l~v~R~~ 90 (97)
T 1n7e_A 84 LKIKKQT 90 (97)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9998864
No 77
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=3.1e-15 Score=101.80 Aligned_cols=83 Identities=33% Similarity=0.497 Sum_probs=74.7
Q ss_pred CCEEEEEEccCCCcccEEEEccC--------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
+.+.+.+.+.. .+|||.+.++. ..+++|..|.+++||+++||+.||+|++|||..+.++++.+++..++..
T Consensus 15 ~~~~~~l~~~~-~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 93 (110)
T 1x5q_A 15 EELTLTILRQT-GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGA 93 (110)
T ss_dssp EEEEEEEECSS-SSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred ceEEEEEecCC-CeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhCC
Confidence 55778888875 89999999763 4689999999999999999999999999999999999999998888889
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 94 g~~v~l~v~R~g 105 (110)
T 1x5q_A 94 GTAVQMRVWRES 105 (110)
T ss_dssp CSEEEEEEEECS
T ss_pred CCeEEEEEEECC
Confidence 999999999974
No 78
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.65 E-value=1.4e-15 Score=103.68 Aligned_cols=82 Identities=22% Similarity=0.406 Sum_probs=72.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC-C--
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK-P-- 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~-~-- 160 (173)
+.+.|++.|. .+|||++.|+. ..++||..|.++++|+++| |+.||+|++|||.++.+++|++++.+++. .
T Consensus 15 ~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r 92 (109)
T 1wi4_A 15 AFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLR 92 (109)
T ss_dssp TEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCS
T ss_pred cEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccC
Confidence 5678888774 79999999875 2379999999999999998 99999999999999999999999999974 3
Q ss_pred -CCeEEEEEEECC
Q psy7774 161 -ADKVTVLAHSDT 172 (173)
Q Consensus 161 -g~~v~l~v~r~~ 172 (173)
+..+.|.+.|+.
T Consensus 93 ~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 93 SESPWEIAFIRSG 105 (109)
T ss_dssp SSSCEEEEEECCC
T ss_pred CCceEEEEEEeCC
Confidence 688999999874
No 79
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.65 E-value=2e-15 Score=98.03 Aligned_cols=79 Identities=18% Similarity=0.208 Sum_probs=70.1
Q ss_pred EEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC--CCeEE
Q psy7774 91 RFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--ADKVT 165 (173)
Q Consensus 91 ~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~--g~~v~ 165 (173)
.++++.|.. .+|||.+.++. ..+++|..|.+++||+++| |+.||+|++|||.++.++++.++..+++.. ++.+.
T Consensus 2 ~~v~l~k~~-~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 80 (85)
T 2i04_A 2 IHTKLRKSS-RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVD 80 (85)
T ss_dssp EEEEEECBT-TBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEE
T ss_pred EEEEEEECC-CCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEE
Confidence 457888876 79999998865 4579999999999999999 999999999999999999999999888764 88999
Q ss_pred EEEEE
Q psy7774 166 VLAHS 170 (173)
Q Consensus 166 l~v~r 170 (173)
|++.|
T Consensus 81 l~v~R 85 (85)
T 2i04_A 81 LELCR 85 (85)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99876
No 80
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.65 E-value=2.1e-15 Score=100.25 Aligned_cols=83 Identities=33% Similarity=0.490 Sum_probs=74.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC--------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
+...+.+.+.. .+|||++.++. ..+++|..|.+++||+++||+.||+|++|||..+.++++.+++..++..
T Consensus 3 ~~~~v~~~~~~-~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 3 EELTLTILRQT-GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp CEEEEEEECBT-TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred eEEEEEEEeCC-CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 45678888875 89999999764 3689999999999999999999999999999999999999888888889
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 82 g~~v~l~v~R~g 93 (97)
T 2w4f_A 82 GTAVQMRVWRER 93 (97)
T ss_dssp CSEEEEEEECCS
T ss_pred CCeEEEEEEeCC
Confidence 999999999874
No 81
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=1.9e-15 Score=105.02 Aligned_cols=84 Identities=18% Similarity=0.227 Sum_probs=75.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC--CCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK--PAD 162 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~ 162 (173)
.+.+.|.|.+.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.+++.+++. .+.
T Consensus 18 ~~~~~v~l~~~~-~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~ 96 (123)
T 1ueq_A 18 GTFLSTTLKKSN-MGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQ 96 (123)
T ss_dssp SEEEEEEEECCT-TSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred CcEEEEEEEeCC-CceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 356778888875 79999999866 4579999999999999999 99999999999999999999999999986 589
Q ss_pred eEEEEEEECC
Q psy7774 163 KVTVLAHSDT 172 (173)
Q Consensus 163 ~v~l~v~r~~ 172 (173)
.+.|+|.|..
T Consensus 97 ~v~l~v~R~~ 106 (123)
T 1ueq_A 97 SVNLVLCRGY 106 (123)
T ss_dssp EEEEEEEESC
T ss_pred eEEEEEEeCC
Confidence 9999999874
No 82
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.65 E-value=7.4e-16 Score=100.05 Aligned_cols=80 Identities=16% Similarity=0.292 Sum_probs=70.6
Q ss_pred EEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 91 RFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 91 ~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
..|++. ++ .+|||++.++. ..+++|..|.+++||+++||+.||+|++|||.++.++++.++...++..++.+.|++
T Consensus 3 ~~v~l~-~~-~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 80 (85)
T 1rgw_A 3 YSVTLT-GP-GPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTL 80 (85)
T ss_dssp EEEEEC-CS-SCCCEEECCCGGGTSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEE
T ss_pred EEEEEe-CC-CccCEEEEeccCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEE
Confidence 456673 34 79999999876 458999999999999999999999999999999999999999988888888899999
Q ss_pred EECC
Q psy7774 169 HSDT 172 (173)
Q Consensus 169 ~r~~ 172 (173)
.|+.
T Consensus 81 ~R~~ 84 (85)
T 1rgw_A 81 QKSK 84 (85)
T ss_dssp ESCC
T ss_pred EeCC
Confidence 8864
No 83
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=2e-15 Score=101.48 Aligned_cols=84 Identities=36% Similarity=0.567 Sum_probs=73.9
Q ss_pred CCEEEEEEccCCCcccEEEEccCC-----------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHH
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA-----------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYE 156 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~-----------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~ 156 (173)
.|+++.+.+.....|||.+.++.. .+++|..|.++|||+++| |+.||+|++|||.++.++++.++..+
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 579999998776789999987542 589999999999999999 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEECC
Q psy7774 157 LAKPADKVTVLAHSDT 172 (173)
Q Consensus 157 l~~~g~~v~l~v~r~~ 172 (173)
++..++.+.|+|.|..
T Consensus 84 l~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 84 IRKAGNPVVFMVQSII 99 (103)
T ss_dssp HHTCCSSEEEEEECCC
T ss_pred HHhCCCcEEEEEEECC
Confidence 9887889999999875
No 84
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=4.2e-16 Score=105.44 Aligned_cols=85 Identities=25% Similarity=0.450 Sum_probs=76.1
Q ss_pred CCCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 87 SGEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 87 ~~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
+..+|.|.|.|.. .+|||.+.++. ..+++|..|.++++|+++||+.||+|++|||.++.++++.+++..++..++.+.
T Consensus 6 ~~~~r~v~l~k~~-~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 84 (106)
T 2eei_A 6 SGQPRLCYLVKEG-GSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKSGSRVM 84 (106)
T ss_dssp CSSSEEEEEECCS-SSCSCCEECCSSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHHCSEEE
T ss_pred CCCCEEEEEEECC-CCCCEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEE
Confidence 3478999999964 89999998765 468999999999999999999999999999999999999999988887789999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|++.|..
T Consensus 85 l~v~r~~ 91 (106)
T 2eei_A 85 FLLVDKE 91 (106)
T ss_dssp EEECCTT
T ss_pred EEEEcCc
Confidence 9998764
No 85
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.65 E-value=9.4e-16 Score=107.32 Aligned_cols=86 Identities=19% Similarity=0.346 Sum_probs=76.8
Q ss_pred CCCCEEEEEEccC-CCcccEEEEccCC-----------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHH
Q psy7774 87 SGEPRFLMIETRK-CSNLGISLVGGNA-----------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEA 153 (173)
Q Consensus 87 ~~~~~~v~l~~~~-~~~lG~~l~gg~~-----------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~ 153 (173)
...++.|.|.|.+ +.+|||++.++.. .+++|..|.++|+|+++| |+.||+|++|||.++.++++.++
T Consensus 27 ~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 106 (128)
T 1nf3_C 27 PETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQV 106 (128)
T ss_dssp CTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHH
T ss_pred CCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4578999999975 5899999987642 479999999999999999 99999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEECC
Q psy7774 154 AYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 154 ~~~l~~~g~~v~l~v~r~~ 172 (173)
+.+++..+..+.|+|.|..
T Consensus 107 ~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 107 TDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHTTTSEEEEEECCC
T ss_pred HHHHHcCCCeEEEEEEECC
Confidence 9999888889999998864
No 86
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.64 E-value=3.7e-16 Score=121.69 Aligned_cols=86 Identities=29% Similarity=0.386 Sum_probs=78.8
Q ss_pred CCCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCe
Q psy7774 87 SGEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 163 (173)
Q Consensus 87 ~~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~ 163 (173)
..+++.|.|.|..+.+|||+|.||. ..++||..|.+|++|++ +||+.||+|++|||+++.+++|.+++.+++..++.
T Consensus 75 ~~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~ 154 (263)
T 1z87_A 75 LLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKE 154 (263)
T ss_dssp SCSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSC
T ss_pred CCccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCe
Confidence 3478999999987789999999986 46899999999999999 79999999999999999999999999999988999
Q ss_pred EEEEEEECC
Q psy7774 164 VTVLAHSDT 172 (173)
Q Consensus 164 v~l~v~r~~ 172 (173)
|.|+|+|..
T Consensus 155 V~L~V~R~~ 163 (263)
T 1z87_A 155 VVLEVKYMK 163 (263)
T ss_dssp CCEEEECCS
T ss_pred EEEEEEeCc
Confidence 999999863
No 87
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.64 E-value=8e-16 Score=106.23 Aligned_cols=85 Identities=16% Similarity=0.345 Sum_probs=75.2
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCccccc--CCCCCCEEEEECCEecCCCCHHHHHHHHhCCC--
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSA--GLRTGDRILEYNGTDLRAATAEEAAYELAKPA-- 161 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~--gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g-- 161 (173)
..++.|.+.|....+|||.+.++. ..+++|..|.++++|+++ ||+.||+|++|||.++.++++.+++.+++..+
T Consensus 14 ~~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~ 93 (119)
T 2cs5_A 14 DNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCER 93 (119)
T ss_dssp SCCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHC
T ss_pred CCeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccc
Confidence 357899999987678999999876 347999999999999998 99999999999999999999999999998664
Q ss_pred --CeEEEEEEECC
Q psy7774 162 --DKVTVLAHSDT 172 (173)
Q Consensus 162 --~~v~l~v~r~~ 172 (173)
..+.|+|.|+.
T Consensus 94 ~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 94 HSGELMLLVRPNA 106 (119)
T ss_dssp CSSCEEEEEECCC
T ss_pred CCCEEEEEEEccc
Confidence 58999998863
No 88
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.64 E-value=3.5e-15 Score=98.90 Aligned_cols=79 Identities=25% Similarity=0.352 Sum_probs=69.8
Q ss_pred EEEEEEccCCCcccEEEEccC----------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 91 RFLMIETRKCSNLGISLVGGN----------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 91 ~~v~l~~~~~~~lG~~l~gg~----------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
.+|.+.+. .+|||++.|+. ..+++|..|.++++|++ ||+.||+|++|||.++.++++.+++..++..
T Consensus 5 ~~v~l~~~--~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (95)
T 1mfg_A 5 IRVRVEKD--PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTF 81 (95)
T ss_dssp EEEEEECS--SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred EEEEECCC--CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhcC
Confidence 45666664 48999999864 34899999999999999 9999999999999999999999999999888
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 82 ~~~v~l~v~R~~ 93 (95)
T 1mfg_A 82 QNTVELIIVREV 93 (95)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEeCC
Confidence 999999999874
No 89
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.64 E-value=1.6e-15 Score=105.47 Aligned_cols=84 Identities=26% Similarity=0.446 Sum_probs=75.9
Q ss_pred CCCEEEEEEccCCCcccEEEEccC---CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCe
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN---AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADK 163 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~---~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~ 163 (173)
.+.+.|.|.+.. .+|||++.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++..++..+..
T Consensus 24 ~~~~~v~l~k~~-~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 102 (124)
T 2daz_A 24 GELHIIELEKDK-NGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSK 102 (124)
T ss_dssp SEEEEEEEECCS-SCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSE
T ss_pred CceEEEEEEeCC-CccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 356789999875 89999999875 3589999999999999998 999999999999999999999999999888889
Q ss_pred EEEEEEECC
Q psy7774 164 VTVLAHSDT 172 (173)
Q Consensus 164 v~l~v~r~~ 172 (173)
+.|+|.|+.
T Consensus 103 v~l~v~R~~ 111 (124)
T 2daz_A 103 VKLVFIRNE 111 (124)
T ss_dssp EEEEEEECT
T ss_pred EEEEEEeCC
Confidence 999999874
No 90
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=2e-15 Score=99.98 Aligned_cols=82 Identities=28% Similarity=0.340 Sum_probs=73.0
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
.++.|.+. ++ .+|||.+.+|. ..+++|..|.+++||+++||+.||+|++|||..+.++++.++...++..+..+.|
T Consensus 8 ~~~~v~l~-~~-~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 85 (94)
T 2eeg_A 8 MPHSVTLR-GP-SPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTL 85 (94)
T ss_dssp CCEEEEEC-CS-SCCSCCEECCTTTTSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCEEE
T ss_pred ceEEEEEe-CC-CccCEEEECccCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 56778884 34 69999999876 4689999999999999999999999999999999999999999888888999999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
+|.|+.
T Consensus 86 ~v~R~g 91 (94)
T 2eeg_A 86 SVSSGP 91 (94)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 998864
No 91
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.64 E-value=7.9e-16 Score=107.63 Aligned_cols=80 Identities=24% Similarity=0.496 Sum_probs=70.0
Q ss_pred EEEEccCCCcccEEEEccCC------CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC-----
Q psy7774 93 LMIETRKCSNLGISLVGGNA------VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP----- 160 (173)
Q Consensus 93 v~l~~~~~~~lG~~l~gg~~------~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~----- 160 (173)
|.+.+....+|||++.++.+ .++||..|.+++||+++| |+.||+|++|||.++.+++|.+++.+++..
T Consensus 29 v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g 108 (127)
T 1wg6_A 29 IPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEG 108 (127)
T ss_dssp EECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhcccc
Confidence 44444556899999998753 489999999999999988 999999999999999999999999999865
Q ss_pred --CCeEEEEEEECC
Q psy7774 161 --ADKVTVLAHSDT 172 (173)
Q Consensus 161 --g~~v~l~v~r~~ 172 (173)
+..|.|+|.|+.
T Consensus 109 ~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 109 NIRGMIQLVILRRS 122 (127)
T ss_dssp HHTCEEEEEEEECS
T ss_pred CCCCEEEEEEEeCC
Confidence 899999999874
No 92
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.63 E-value=1.5e-15 Score=103.08 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=73.6
Q ss_pred CEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
...|.|.+..+.+|||.+.+ ...|++|..|.++|+|+++| |+.||+|++|||.++.++++.++...++..++.+.|++
T Consensus 3 ~~~v~L~k~~~~glG~~i~~-~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v 81 (106)
T 2la8_A 3 KFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEV 81 (106)
T ss_dssp EEEEEECCBSSSTTCCEEEE-CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEE
T ss_pred EEEEEEEeCCCCccCEEEEe-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEE
Confidence 45688887677899999987 45789999999999999999 99999999999999999999999999998888999999
Q ss_pred EECC
Q psy7774 169 HSDT 172 (173)
Q Consensus 169 ~r~~ 172 (173)
.|..
T Consensus 82 ~R~~ 85 (106)
T 2la8_A 82 TRPK 85 (106)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9863
No 93
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.63 E-value=2.3e-15 Score=102.07 Aligned_cols=85 Identities=25% Similarity=0.343 Sum_probs=74.3
Q ss_pred CCCEEEEEE-ccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHh
Q psy7774 88 GEPRFLMIE-TRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELA 158 (173)
Q Consensus 88 ~~~~~v~l~-~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~ 158 (173)
.+.+.+.+. +....+|||++.++. ..+++|..|.+++||+++| |++||+|++|||..+.++++.+++.+++
T Consensus 11 ~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 11 FSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp CEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356778885 345689999998863 3489999999999999999 9999999999999999999999998888
Q ss_pred CCCCeEEEEEEECC
Q psy7774 159 KPADKVTVLAHSDT 172 (173)
Q Consensus 159 ~~g~~v~l~v~r~~ 172 (173)
..+..+.|+|.|+.
T Consensus 91 ~~g~~v~l~v~R~~ 104 (108)
T 2jre_A 91 NAGNPVRLLLIRRL 104 (108)
T ss_dssp HHCSEEEEEEEECC
T ss_pred cCCCeEEEEEEeCC
Confidence 78899999999874
No 94
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.63 E-value=2.5e-14 Score=125.46 Aligned_cols=84 Identities=38% Similarity=0.652 Sum_probs=76.2
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
.+++.|.|.+.. .+|||.+.++. ..+++|..|.+||+|+++| |+.||+|++|||.++.++++++++.+++..++.+.
T Consensus 306 ~~~~~v~l~~~~-~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~ 384 (721)
T 2xkx_A 306 REPRRIVIHRGS-TGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVT 384 (721)
T ss_pred cceEEEEEEECC-CCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeEE
Confidence 357888998876 78999998875 5699999999999999998 99999999999999999999999999998899999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|.|+.
T Consensus 385 L~v~r~~ 391 (721)
T 2xkx_A 385 IIAQYKP 391 (721)
T ss_pred EEEEeCc
Confidence 9998874
No 95
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.63 E-value=1.4e-15 Score=103.19 Aligned_cols=84 Identities=32% Similarity=0.480 Sum_probs=75.9
Q ss_pred CCCEEEEEEccCCCcccEEEE-----ccC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHH
Q psy7774 88 GEPRFLMIETRKCSNLGISLV-----GGN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYE 156 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~-----gg~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~ 156 (173)
.+.+.|.|.+.. .+|||++. ||. ..+++|..|.++|+|+++| |+.||+|++|||.++.++++.+++.+
T Consensus 8 ~~~~~v~l~k~~-~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKND-NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESSS-CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEECC-CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 367889999876 89999998 764 3689999999999999999 99999999999999999999999999
Q ss_pred HhCCCCeEEEEEEECC
Q psy7774 157 LAKPADKVTVLAHSDT 172 (173)
Q Consensus 157 l~~~g~~v~l~v~r~~ 172 (173)
++..+..+.|++.|+.
T Consensus 87 ~~~~g~~v~l~v~R~~ 102 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQ 102 (108)
T ss_dssp HHHTTSEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCC
Confidence 9888999999999864
No 96
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.63 E-value=2.2e-15 Score=110.36 Aligned_cols=82 Identities=29% Similarity=0.466 Sum_probs=73.7
Q ss_pred CCEEEEEEccCCCcccEEEEc---cC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 89 EPRFLMIETRKCSNLGISLVG---GN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~g---g~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
+...|.|.+.. .+|||+|.+ +. ..++||..|.+|++|+++| |+.||+|++|||.++.++++.+++.+++.
T Consensus 80 ~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~ 158 (170)
T 3egg_C 80 ELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 158 (170)
T ss_dssp EEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH
T ss_pred eEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 44668888877 799999998 32 3579999999999999988 99999999999999999999999999998
Q ss_pred CCCeEEEEEEEC
Q psy7774 160 PADKVTVLAHSD 171 (173)
Q Consensus 160 ~g~~v~l~v~r~ 171 (173)
.+..|.|+|.|+
T Consensus 159 ~g~~v~L~V~R~ 170 (170)
T 3egg_C 159 TKGRVRFMIGRE 170 (170)
T ss_dssp CCSEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 999999999984
No 97
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.63 E-value=4.9e-15 Score=96.87 Aligned_cols=81 Identities=25% Similarity=0.315 Sum_probs=69.9
Q ss_pred CCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC--CCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~~v~ 165 (173)
+.+.|+|.|.. .+|||.+.+.. ..+++|..+ +++||+ +||+.||+|++|||..+.++++.+++..++. .+..+.
T Consensus 3 ~~~~v~l~k~~-~g~G~~~~~~~~~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 79 (88)
T 3bpu_A 3 ELITVHIVKGP-MGFGFTIADSPGGGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVT 79 (88)
T ss_dssp EEEEEEEECBT-TBSSCEEEECTTSSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEE
T ss_pred cEEEEEEEcCC-CceeEEEEecCCCCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEE
Confidence 56889999977 89999998765 468999887 999999 9999999999999999999999999988874 688999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|++.|+.
T Consensus 80 l~v~R~g 86 (88)
T 3bpu_A 80 LLVQRQT 86 (88)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9999864
No 98
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.63 E-value=1.2e-15 Score=102.88 Aligned_cols=83 Identities=28% Similarity=0.414 Sum_probs=72.9
Q ss_pred CCEEEEEEccCCCcccEEEEccCCC--C-EEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC-----
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAV--G-IYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK----- 159 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~--~-i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~----- 159 (173)
..+.|.+.+.. .+|||+|.|+.+. + +||..|.++++|+++| |+.||+|++|||.++.+++|++++.+++.
T Consensus 6 ~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~ 84 (103)
T 1ufx_A 6 SGTLVRVKKSA-ATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTK 84 (103)
T ss_dssp SSEEEEEECCS-SSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCS
T ss_pred ceEEEEEEcCC-CcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccC
Confidence 46788898766 8999999988742 3 5999999999999988 99999999999999999999999999976
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.++.+.|.+.|..
T Consensus 85 ~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 85 DRDYIDFLVTEFN 97 (103)
T ss_dssp SCSEEEEEECCCC
T ss_pred CCCeEEEEEEEcc
Confidence 6788999998763
No 99
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.62 E-value=1.7e-14 Score=107.83 Aligned_cols=122 Identities=20% Similarity=0.303 Sum_probs=96.6
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCccccCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGSPTPCNSPGTNRKSSIQHNTSTLTRTH 80 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 80 (173)
+.+++|++++.+|+.+++.|.|.|.|+.... +. ....
T Consensus 66 v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~----------------------~~-------~g~~-------------- 102 (200)
T 2qt5_A 66 LAKFRHDEIISLLKNVGERVVLEVEYELPPV----------------------SI-------QGSS-------------- 102 (200)
T ss_dssp CTTSCHHHHHHHHHTCCSEEEEEEEEECCCC----------------------CC-------CCSS--------------
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEEeccCCCc----------------------cc-------CCCc--------------
Confidence 3578999999999999999999998853210 00 0000
Q ss_pred CCCCCCCCCCEEEEEEccCCCcccEEEEccC------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHH
Q psy7774 81 VCKDERSGEPRFLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEA 153 (173)
Q Consensus 81 ~~~~~~~~~~~~v~l~~~~~~~lG~~l~gg~------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~ 153 (173)
.......+.+.+.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.++
T Consensus 103 -----~~~~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~ 176 (200)
T 2qt5_A 103 -----VMFRTVEVTLHKEG-NTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEA 176 (200)
T ss_dssp -----EEEEEEEEEEECBT-TBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHH
T ss_pred -----cceeEEEEEEecCC-CCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 00023456665654 78999998764 3589999999999999999 99999999999999999999999
Q ss_pred HHHHhCCCCeEEEEEEEC
Q psy7774 154 AYELAKPADKVTVLAHSD 171 (173)
Q Consensus 154 ~~~l~~~g~~v~l~v~r~ 171 (173)
..+++..+..+.|+|.|+
T Consensus 177 ~~~l~~~~~~v~l~v~R~ 194 (200)
T 2qt5_A 177 MSILKQCGQEATLLIEYD 194 (200)
T ss_dssp HHHHHTTCSEEEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEEC
Confidence 999988889999999986
No 100
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=106.12 Aligned_cols=85 Identities=26% Similarity=0.397 Sum_probs=75.5
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
.+.+.|.|.+....+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||.++.++++.+++.+++.
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~ 93 (129)
T 2dmz_A 14 FETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN 93 (129)
T ss_dssp EEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH
T ss_pred CcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 356788886656689999998853 4689999999999999999 99999999999999999999999999988
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.+..+.|+|.|+.
T Consensus 94 ~~~~v~l~v~R~~ 106 (129)
T 2dmz_A 94 AGQVVHLTLVRRK 106 (129)
T ss_dssp CCSSEEEEEEEES
T ss_pred CCCeEEEEEEeCC
Confidence 8999999999864
No 101
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=3.9e-15 Score=102.43 Aligned_cols=83 Identities=41% Similarity=0.709 Sum_probs=76.2
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLA 168 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v 168 (173)
+++.|.+.+.. .+|||.+.++...+++|..|.++++|+++||+.||+|++|||..+.++++.+++..++..++.+.|+|
T Consensus 19 ~~~~v~l~~~~-~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v 97 (117)
T 1uit_A 19 EPRHVKVQKGS-EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILA 97 (117)
T ss_dssp CCEEEEEECSS-CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEE
T ss_pred CCEEEEEEeCC-CCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 67889999876 89999999887789999999999999999999999999999999999999999877778899999999
Q ss_pred EECC
Q psy7774 169 HSDT 172 (173)
Q Consensus 169 ~r~~ 172 (173)
.|+.
T Consensus 98 ~r~~ 101 (117)
T 1uit_A 98 QYNP 101 (117)
T ss_dssp CCCS
T ss_pred EECC
Confidence 8864
No 102
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.62 E-value=5.3e-15 Score=97.28 Aligned_cols=81 Identities=23% Similarity=0.287 Sum_probs=71.4
Q ss_pred CEEEEEEccCCCcccEEEEccCC--CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~~--~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
++.+.+.. ..+|||++.++.. .+++|..|.++|||+++||+.||+|++|||.++.++.+.++..+++..+..+.|+
T Consensus 4 ~~~v~~~~--~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2pkt_A 4 TQQIDLQG--PGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLT 81 (91)
T ss_dssp EEEEEEES--SSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred cEEEEECC--CCCCCEEEEccCCCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 35566653 3799999998763 5899999999999999999999999999999999999999999998899999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
+.|+.
T Consensus 82 v~R~g 86 (91)
T 2pkt_A 82 VARSE 86 (91)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 99864
No 103
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.62 E-value=4.4e-15 Score=103.30 Aligned_cols=85 Identities=35% Similarity=0.542 Sum_probs=76.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-----------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHH
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-----------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAY 155 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-----------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~ 155 (173)
..|+.+.+.+....+|||.+.++. ..+++|..|.++|||+++| |++||+|++|||.++.++++.++..
T Consensus 23 ~~p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 23 MQPRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp CCCEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 467999999877689999998753 2589999999999999999 9999999999999999999999999
Q ss_pred HHhCCCCeEEEEEEECC
Q psy7774 156 ELAKPADKVTVLAHSDT 172 (173)
Q Consensus 156 ~l~~~g~~v~l~v~r~~ 172 (173)
+++..++.+.|+|+|..
T Consensus 103 ~l~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 103 AIRKAGNPVVFMVQSII 119 (123)
T ss_dssp HHHHCCSSEEEEEECCC
T ss_pred HHHcCCCeEEEEEEECC
Confidence 99877889999999864
No 104
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.62 E-value=4.6e-15 Score=99.81 Aligned_cols=82 Identities=24% Similarity=0.336 Sum_probs=72.8
Q ss_pred CCCEEEEEEccCCCcccEEEEccC----------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHH
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN----------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYEL 157 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~----------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l 157 (173)
.+...|.+.+.+ +|||++.++. ..+++|..|.+++||++ ||+.||+|++|||.++.++++.+++..+
T Consensus 10 ~~~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~ 86 (103)
T 1n7t_A 10 KQEIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLL 86 (103)
T ss_dssp CCCEEEEEECSS--CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred cEEEEEEEccCC--CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 356778887754 8999999864 35899999999999999 9999999999999999999999999999
Q ss_pred hCCCCeEEEEEEECC
Q psy7774 158 AKPADKVTVLAHSDT 172 (173)
Q Consensus 158 ~~~g~~v~l~v~r~~ 172 (173)
+..+..+.|+|.|+.
T Consensus 87 ~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 87 KTFQNTVELIIVREV 101 (103)
T ss_dssp HHCCSEEEEEEECCC
T ss_pred hcCCCeEEEEEEecC
Confidence 888999999999874
No 105
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=5.8e-15 Score=98.85 Aligned_cols=83 Identities=30% Similarity=0.463 Sum_probs=73.9
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
.++.|.|.+.....|||.+.++. ..+++|..|.++++|+++||+.||+|++|||..+.++++.+++..++. +..+.|
T Consensus 10 ~~~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l 88 (100)
T 2eeh_A 10 IIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS-SSRLHM 88 (100)
T ss_dssp EECCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS-CSSEEE
T ss_pred eEEEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC-CCEEEE
Confidence 56778998877667999998865 468999999999999999999999999999999999999888888877 899999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
+|.|+.
T Consensus 89 ~v~R~g 94 (100)
T 2eeh_A 89 MVRRMG 94 (100)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 999874
No 106
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.61 E-value=3.4e-15 Score=104.92 Aligned_cols=74 Identities=34% Similarity=0.577 Sum_probs=66.6
Q ss_pred CCCcccEEEEccCC-----CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC--CCCeEEEEEEE
Q psy7774 99 KCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVTVLAHS 170 (173)
Q Consensus 99 ~~~~lG~~l~gg~~-----~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~~v~l~v~r 170 (173)
.+.+|||++.+|.. .++||..|.++++|+++| |+.||+|++|||.++.++++++++.+++. .+..|.|+|.|
T Consensus 46 ~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 125 (131)
T 1wfg_A 46 SGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSR 125 (131)
T ss_dssp SCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEE
T ss_pred CCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEc
Confidence 56899999998752 389999999999999999 99999999999999999999999999975 45999999998
Q ss_pred CC
Q psy7774 171 DT 172 (173)
Q Consensus 171 ~~ 172 (173)
+.
T Consensus 126 ~g 127 (131)
T 1wfg_A 126 SG 127 (131)
T ss_dssp EC
T ss_pred CC
Confidence 63
No 107
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.61 E-value=6.2e-15 Score=101.03 Aligned_cols=83 Identities=25% Similarity=0.342 Sum_probs=76.1
Q ss_pred CCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
.|+++.+.+.....|||.+.++. ..+++|..|.+++||+++||+.||+|++|||..+.++++.++...++..+..+.|+
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 92 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL 92 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEE
T ss_pred CCEEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 68999999987789999998754 56899999999999999999999999999999999999999999998779999999
Q ss_pred EEEC
Q psy7774 168 AHSD 171 (173)
Q Consensus 168 v~r~ 171 (173)
|.|.
T Consensus 93 v~R~ 96 (114)
T 2edz_A 93 VLDG 96 (114)
T ss_dssp EECH
T ss_pred EEEC
Confidence 9885
No 108
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.61 E-value=6.3e-15 Score=100.78 Aligned_cols=80 Identities=16% Similarity=0.186 Sum_probs=70.0
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC--CCCeEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~~v~l 166 (173)
+.++|.|.|+. .+|||+|.++. .+.+|..|.+ ++..+||++||+|++|||.++.+++|.+++.+|+. .|..+.|
T Consensus 12 ~~~~V~L~Kg~-~G~GFsI~~~~-~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L 87 (113)
T 3soe_A 12 LLVTIPLIKGP-KGFGFAIADSP-TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPL 87 (113)
T ss_dssp EEEEEEEECBT-TBSSEEEEEET-TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEEEEECC-CcccEEEeCCC-CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEE
Confidence 56889999986 89999997543 4678999988 46679999999999999999999999999999985 3889999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
+|+|..
T Consensus 88 ~V~R~g 93 (113)
T 3soe_A 88 LILRGG 93 (113)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999974
No 109
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=2.2e-15 Score=99.34 Aligned_cols=82 Identities=20% Similarity=0.264 Sum_probs=73.1
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
.+|.|.|.|..+.+|||++.+ ...+++|..|.+++||+++| |+.||+|++|||.++ +.++.++..+++..++.+.|+
T Consensus 6 ~~r~v~l~k~~~~~lG~~i~~-~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~ 83 (91)
T 2e7k_A 6 SGRMVGIRKTAGEHLGVTFRV-EGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILK 83 (91)
T ss_dssp CSCBCCBCCCTTCCCCEEEEE-SSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEE
T ss_pred CcEEEEEEECCCCcEeEEEEe-cCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEE
Confidence 567888888777899999987 45689999999999999965 999999999999999 999999999998888899999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
+.|..
T Consensus 84 v~~~~ 88 (91)
T 2e7k_A 84 ILSGP 88 (91)
T ss_dssp EECCS
T ss_pred EEECC
Confidence 98754
No 110
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.61 E-value=3.2e-15 Score=104.71 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=74.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC--CC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP--AD 162 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~--g~ 162 (173)
.+...|.|.+.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.+++.+++.. +.
T Consensus 17 g~~~~v~l~~~~-~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~ 95 (129)
T 2kpk_A 17 GKFIHTKLRKSS-RGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGA 95 (129)
T ss_dssp SEEEEEEEEECS-SCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTE
T ss_pred CcEEEEEEEECC-CcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCC
Confidence 356778888866 79999999865 3479999999999999999 999999999999999999999999999754 88
Q ss_pred eEEEEEEECC
Q psy7774 163 KVTVLAHSDT 172 (173)
Q Consensus 163 ~v~l~v~r~~ 172 (173)
.+.|+|.|..
T Consensus 96 ~v~l~v~R~~ 105 (129)
T 2kpk_A 96 SVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEEEeCC
Confidence 9999999864
No 111
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.61 E-value=3.2e-15 Score=99.86 Aligned_cols=80 Identities=28% Similarity=0.324 Sum_probs=69.8
Q ss_pred EEEEEccCCCcccEEEEccC---------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCC
Q psy7774 92 FLMIETRKCSNLGISLVGGN---------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPAD 162 (173)
Q Consensus 92 ~v~l~~~~~~~lG~~l~gg~---------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~ 162 (173)
++.+.+.. .+|||++.++. ..+++|..|.++|||+++||+.||+|++|||..+.++++.++...++..++
T Consensus 5 ~v~l~~~~-~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 83 (99)
T 3khf_A 5 PIVIHSSG-KKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGN 83 (99)
T ss_dssp CEEEEC-C-CCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCS
T ss_pred CEEEEeCC-CCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 36777755 89999998643 126789999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECC
Q psy7774 163 KVTVLAHSDT 172 (173)
Q Consensus 163 ~v~l~v~r~~ 172 (173)
.+.|++.|..
T Consensus 84 ~v~l~v~r~~ 93 (99)
T 3khf_A 84 KISLRTTALE 93 (99)
T ss_dssp EEEEEEECSC
T ss_pred EEEEEEEECC
Confidence 9999999864
No 112
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.60 E-value=4.6e-15 Score=102.38 Aligned_cols=84 Identities=25% Similarity=0.406 Sum_probs=72.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC---CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCC-Ce
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN---AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPA-DK 163 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~---~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g-~~ 163 (173)
..+.+.+.+..+.+|||.+.++. ..+++|..|.+++||+++| |+.||+|++|||..+.++++.+++.+++..+ ..
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~ 94 (119)
T 1x6d_A 15 GIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPR 94 (119)
T ss_dssp TEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSS
T ss_pred CeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 56778888877789999999876 3589999999999999999 9999999999999999999999999997654 44
Q ss_pred EEEEEEECC
Q psy7774 164 VTVLAHSDT 172 (173)
Q Consensus 164 v~l~v~r~~ 172 (173)
+.+++.|+.
T Consensus 95 ~~l~v~R~~ 103 (119)
T 1x6d_A 95 QAVIVTRKL 103 (119)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEcCC
Confidence 557777763
No 113
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.60 E-value=7.4e-15 Score=109.49 Aligned_cols=84 Identities=23% Similarity=0.389 Sum_probs=76.6
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
..++.|.+.+.++.+|||++.++. ..+++|..|.+||+|+++||+.||+|++|||..+.++++.+++..++. +..+.
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~v~ 161 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT-EKTVS 161 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS-SSEEE
T ss_pred CceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC-CCeEE
Confidence 467899999986789999998875 458999999999999999999999999999999999999999998888 99999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|.|..
T Consensus 162 l~v~r~g 168 (192)
T 3k1r_A 162 IKVRHIG 168 (192)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999864
No 114
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.60 E-value=5.8e-15 Score=101.33 Aligned_cols=83 Identities=36% Similarity=0.553 Sum_probs=74.9
Q ss_pred CCEEEEEEccCCCcccEEEEccCC---CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~---~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
+.+.+.+.+.. .+|||.+.++.+ .+++|..|.++++|+++| |+.||+|++|||..+.++++.+++.+++..+..+
T Consensus 17 ~~~~v~l~~~~-~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v 95 (116)
T 2dm8_A 17 QEMIIEISKGR-SGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKV 95 (116)
T ss_dssp SCEEEEEECCS-SCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEE
T ss_pred CEEEEEEEECC-CcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 56888898876 899999998763 589999999999999999 9999999999999999999999999998888999
Q ss_pred EEEEEECC
Q psy7774 165 TVLAHSDT 172 (173)
Q Consensus 165 ~l~v~r~~ 172 (173)
.|+|.|+.
T Consensus 96 ~l~v~R~~ 103 (116)
T 2dm8_A 96 RLVVYRDE 103 (116)
T ss_dssp EEEEECCS
T ss_pred EEEEEeCC
Confidence 99998864
No 115
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=2.5e-15 Score=102.64 Aligned_cols=84 Identities=39% Similarity=0.656 Sum_probs=76.5
Q ss_pred CCCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 87 SGEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 87 ~~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
..+++.|.|.+.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.+++.+++..+..+
T Consensus 13 ~~~~~~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~~~v 91 (113)
T 1um7_A 13 AREPRKIILHKGS-TGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQSV 91 (113)
T ss_dssp CCSEEEEEEECCS-SCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCCSEE
T ss_pred CCceEEEEEEECC-CcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 3478999999876 89999998876 4789999999999999999 9999999999999999999999998888889999
Q ss_pred EEEEEEC
Q psy7774 165 TVLAHSD 171 (173)
Q Consensus 165 ~l~v~r~ 171 (173)
.|+|.|+
T Consensus 92 ~l~v~r~ 98 (113)
T 1um7_A 92 TIVAQYR 98 (113)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 9999886
No 116
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.60 E-value=1.8e-15 Score=103.52 Aligned_cols=83 Identities=29% Similarity=0.460 Sum_probs=73.7
Q ss_pred CCEEEEEEccCCCcccEEEEc---cC-----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 89 EPRFLMIETRKCSNLGISLVG---GN-----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~g---g~-----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
+.+.|.|.+.. .+|||++.+ +. ..+++|..|.++|+|+++| |+.||+|++|||.++.++++.+++.+++.
T Consensus 4 ~~~~v~l~k~~-~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (113)
T 2g5m_B 4 ELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN 82 (113)
T ss_dssp EEEEEECCCCS-SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred EEEEEEEEeCC-CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 35667787766 899999988 32 4589999999999999999 99999999999999999999999999988
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.+..+.|+|.|+.
T Consensus 83 ~g~~v~l~v~R~~ 95 (113)
T 2g5m_B 83 TKGRVRFMIGRER 95 (113)
T ss_dssp SCSSCEEEEEECC
T ss_pred CCCeEEEEEEeCC
Confidence 8999999999874
No 117
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.60 E-value=1.4e-14 Score=99.41 Aligned_cols=83 Identities=23% Similarity=0.320 Sum_probs=74.4
Q ss_pred CCEEEEEEccCCCcccEEEEccCC--CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~--~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
.++.|.+.+....+|||.+.++.. .+++|..|.++|+|+++| |+.||+|++|||.++.+.++.++..+++..++.+.
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~ 103 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVT 103 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEEECCCCcEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 679999999886779999998764 479999999999999999 99999999999999999999999999987777889
Q ss_pred EEEEEC
Q psy7774 166 VLAHSD 171 (173)
Q Consensus 166 l~v~r~ 171 (173)
|+|.+.
T Consensus 104 l~v~~~ 109 (114)
T 2gzv_A 104 IHYNKL 109 (114)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 988764
No 118
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.60 E-value=1.6e-14 Score=98.43 Aligned_cols=83 Identities=25% Similarity=0.431 Sum_probs=73.1
Q ss_pred CCEEEEEEccCCCcccEEEEccCC-----CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC--C
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK--P 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~-----~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~ 160 (173)
+.+.+.+.+.. .+|||.+.++.. .+++|..|.++++|+++| |+.||+|++|||..+.++++.++..+++. .
T Consensus 11 ~~~~~~l~~~~-~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 89 (111)
T 2koj_A 11 KRLNIQLKKGT-EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKM 89 (111)
T ss_dssp EEEEEEEECBT-TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCC
T ss_pred cEEEEEEEECC-CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45677787765 899999987652 689999999999999999 99999999999999999999999988875 4
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 90 g~~v~l~v~R~~ 101 (111)
T 2koj_A 90 EGTVSLLVFRQE 101 (111)
T ss_dssp SSEEEEEEEECC
T ss_pred CCeEEEEEEeCC
Confidence 899999999874
No 119
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.60 E-value=3.1e-15 Score=100.73 Aligned_cols=83 Identities=19% Similarity=0.319 Sum_probs=73.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
.+...|.+. ++ .+|||++.++. ..+++|..|.++++|+++||+.||+|++|||..+.++++.+++..++..++.+.
T Consensus 4 g~~~~v~l~-~~-~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~ 81 (103)
T 1wf7_A 4 GSSGSVSLV-GP-APWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLN 81 (103)
T ss_dssp CCCEEEEEE-SS-SCCSCCEEEETTTTEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEE
T ss_pred CCEEEEEEe-CC-CccCEEEeccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 356788887 33 79999999876 346999999999999999999999999999999999999999988887789999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|.|+.
T Consensus 82 l~v~R~g 88 (103)
T 1wf7_A 82 MTLQRAS 88 (103)
T ss_dssp EEECCCS
T ss_pred EEEEeCC
Confidence 9998864
No 120
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=1.6e-15 Score=101.98 Aligned_cols=83 Identities=25% Similarity=0.402 Sum_probs=73.9
Q ss_pred CCEEEEEEccCCCcccEEEEccCC--CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~--~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
+.+.+.+.+.. .+|||.+.++.+ .+++|..|.++++|+++| |+.||+|++|||.++.++++.+++..++..+..+.
T Consensus 11 ~~~~v~l~~~~-~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~ 89 (103)
T 1wfv_A 11 DYFTVDMEKGA-KGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR 89 (103)
T ss_dssp CCEECCEECCT-TSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEEC
T ss_pred eEEEEEEecCC-CcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 56778888766 789999987763 489999999999999999 99999999999999999999999988887889999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|.|+.
T Consensus 90 l~v~R~~ 96 (103)
T 1wfv_A 90 LLLKRGT 96 (103)
T ss_dssp EEEECTT
T ss_pred EEEEECC
Confidence 9999864
No 121
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.58 E-value=8.4e-15 Score=101.59 Aligned_cols=85 Identities=26% Similarity=0.350 Sum_probs=75.1
Q ss_pred CCCEEEEEEccCCCcccEEEEccC------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
.++++|.|.+....+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.++..+++..
T Consensus 14 ~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 93 (122)
T 1v5q_A 14 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 93 (122)
T ss_dssp EEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 367889998886789999999762 4579999999999999999 999999999999999999999999988743
Q ss_pred --CCeEEEEEEECC
Q psy7774 161 --ADKVTVLAHSDT 172 (173)
Q Consensus 161 --g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 94 ~~g~~v~l~v~R~~ 107 (122)
T 1v5q_A 94 SITSKVTLEIEFDV 107 (122)
T ss_dssp TTTTCEEEEEEEEC
T ss_pred CCCCeEEEEEEECC
Confidence 889999999864
No 122
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=7.7e-15 Score=98.32 Aligned_cols=83 Identities=19% Similarity=0.331 Sum_probs=72.4
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCccccc-CCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~-gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
+.+.+.+.+....+|||.+.++. ..+++|..|.+++||+++ ||++||+|++|||.++.++ +.+++..++..+..+.
T Consensus 9 ~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~ 87 (100)
T 2edp_A 9 SFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILK 87 (100)
T ss_dssp CCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCE
T ss_pred CcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEE
Confidence 55677777666579999999876 347999999999999998 9999999999999999987 8888888888889999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|.|+.
T Consensus 88 l~v~R~~ 94 (100)
T 2edp_A 88 LIVRRRN 94 (100)
T ss_dssp EEEEECC
T ss_pred EEEEeCC
Confidence 9999974
No 123
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.58 E-value=1.4e-14 Score=98.65 Aligned_cols=81 Identities=23% Similarity=0.261 Sum_probs=71.8
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCe-EEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK-VTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~-v~l~ 167 (173)
.+|.|.|.|.+ .+|||.+.+. .+++|..|.+++||+++||+.||+|++|||.++.++++.++..+++..++. +.|+
T Consensus 23 ~~r~v~l~k~~-~~~G~~l~~~--~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~ 99 (109)
T 2vsv_A 23 MPRSIRFTAEE-GDLGFTLRGN--APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMK 99 (109)
T ss_dssp SCEEEEECCGG-GCCCEEEESS--SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEE
T ss_pred CCEEEEEEeCC-CceeEEEeCC--CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEE
Confidence 57999999976 8999999753 468999999999999999999999999999999999999999999876664 9999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
|.|..
T Consensus 100 V~~~~ 104 (109)
T 2vsv_A 100 VVSLL 104 (109)
T ss_dssp EESCC
T ss_pred EEECC
Confidence 98763
No 124
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.58 E-value=1.6e-14 Score=96.24 Aligned_cols=83 Identities=23% Similarity=0.381 Sum_probs=71.6
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCC-eEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPAD-KVT 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~-~v~ 165 (173)
..++.+.+.+.. .+|||.+.++. ..+++|..|.++|||+++||+.||+|++|||..+.++++.++..+++...+ .+.
T Consensus 8 ~~~~~~~l~~~~-~g~G~~~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 86 (98)
T 2jxo_A 8 LRPRLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (98)
T ss_dssp SCCEEEEEECTT-TCCCEEEECCCSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEE
T ss_pred CCcEEEEEEeCC-CcccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 357889999876 79999998766 458999999999999999999999999999999999999999999976544 556
Q ss_pred EEEEEC
Q psy7774 166 VLAHSD 171 (173)
Q Consensus 166 l~v~r~ 171 (173)
|++.|+
T Consensus 87 l~v~R~ 92 (98)
T 2jxo_A 87 LVVDRE 92 (98)
T ss_dssp EECCHH
T ss_pred EEEECC
Confidence 877764
No 125
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.58 E-value=4.2e-15 Score=98.44 Aligned_cols=80 Identities=23% Similarity=0.323 Sum_probs=70.0
Q ss_pred EEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEE
Q psy7774 93 LMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHS 170 (173)
Q Consensus 93 v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r 170 (173)
+.+.+....+|||++.++. ..+++|..|.+++||+++||+.||+|++|||..+.++++.++..+++..+..+.|+|.|
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R 87 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDR 87 (94)
T ss_dssp EEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEEC
T ss_pred EEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEE
Confidence 4444445579999998866 35899999999999999999999999999999999999999999998777999999998
Q ss_pred CC
Q psy7774 171 DT 172 (173)
Q Consensus 171 ~~ 172 (173)
+.
T Consensus 88 ~g 89 (94)
T 1vb7_A 88 SS 89 (94)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 126
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.58 E-value=1.8e-14 Score=100.29 Aligned_cols=81 Identities=33% Similarity=0.521 Sum_probs=70.5
Q ss_pred CEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVL 167 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~ 167 (173)
.+.+.+.+ +.+|||.+.++...+++|..|.+++||+++||+.||+|++|||..+.++++.++...+. ..+..+.|+
T Consensus 30 ~~~~~~~~--~~~lG~~l~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~ 107 (124)
T 3tsv_A 30 MKLVKFRK--GDSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL 107 (124)
T ss_dssp CEEEEEEC--SSCCCEEEEECTTSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEE
T ss_pred eEEEEcCC--CCceeEEEecCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 34444443 47999999987778999999999999999999999999999999999999999988776 688999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
|+|+.
T Consensus 108 v~R~~ 112 (124)
T 3tsv_A 108 AQKKK 112 (124)
T ss_dssp EEECH
T ss_pred EEECC
Confidence 99863
No 127
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.58 E-value=2.3e-14 Score=95.03 Aligned_cols=81 Identities=25% Similarity=0.359 Sum_probs=71.9
Q ss_pred CEEEEEEccCCCcccEEEEccC------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCC
Q psy7774 90 PRFLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPAD 162 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~ 162 (173)
...+.+.+.. .+|||.+.++. ..+++|..|.++++|+++| |+.||+|++|||..+.++++.+++..++..+.
T Consensus 5 ~~~v~l~~~~-~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 83 (97)
T 2iwn_A 5 TFDVELTKNV-QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQ 83 (97)
T ss_dssp EEEEEEECBT-TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCS
T ss_pred EEEEEEecCC-CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4567777665 78999999863 4689999999999999999 99999999999999999999999988888999
Q ss_pred eEEEEEEEC
Q psy7774 163 KVTVLAHSD 171 (173)
Q Consensus 163 ~v~l~v~r~ 171 (173)
.+.|+|.|+
T Consensus 84 ~v~l~v~r~ 92 (97)
T 2iwn_A 84 TVLLTLMRR 92 (97)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEeC
Confidence 999999885
No 128
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.58 E-value=1e-14 Score=98.37 Aligned_cols=81 Identities=16% Similarity=0.273 Sum_probs=71.1
Q ss_pred CCCEEEEEEccCCCcccEEEEcc---------CCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGG---------NAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA 158 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg---------~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~ 158 (173)
..++.+.+.+....+|||.+.+. ...+++|..|.++++|+++||+.||+|++|||.++.++++.++..+++
T Consensus 14 ~~~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 14 SQRKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp SCCCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred CcceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 46788889987768999999872 245899999999999999999999999999999999999999999998
Q ss_pred CCCCeEEEEE
Q psy7774 159 KPADKVTVLA 168 (173)
Q Consensus 159 ~~g~~v~l~v 168 (173)
..++.+.|+|
T Consensus 94 ~~~~~v~l~v 103 (104)
T 2z17_A 94 SSGNLLTIET 103 (104)
T ss_dssp HTTTEEEEEC
T ss_pred hCCCcEEEEE
Confidence 7677888765
No 129
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.57 E-value=3.1e-14 Score=124.93 Aligned_cols=115 Identities=24% Similarity=0.349 Sum_probs=97.0
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCccccCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGSPTPCNSPGTNRKSSIQHNTSTLTRTH 80 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 80 (173)
+.+++|++++.+|+.+++.|+|+|.|+... .
T Consensus 122 v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~------------------------~------------------------- 152 (721)
T 2xkx_A 122 VREVTHSAAVEALKEAGSIVRLYVMRRKPP------------------------A------------------------- 152 (721)
T ss_pred CCCCCHHHHHHHhhccccccceEEEecccc------------------------c-------------------------
Confidence 467899999999999999999999875321 0
Q ss_pred CCCCCCCCCCEEEEEEccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHH
Q psy7774 81 VCKDERSGEPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEE 152 (173)
Q Consensus 81 ~~~~~~~~~~~~v~l~~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~ 152 (173)
.....|.|.+.. .+|||++.++. ..|++|..|.+|++|+++| |+.||+|++|||..+.++++.+
T Consensus 153 -------~~~~~v~l~k~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~ 224 (721)
T 2xkx_A 153 -------EKVMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED 224 (721)
T ss_pred -------ccceeeeeeeec-CCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHH
Confidence 013456676654 68999998763 3589999999999999998 9999999999999999999999
Q ss_pred HHHHHhCCCCeEEEEEEECC
Q psy7774 153 AAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 153 ~~~~l~~~g~~v~l~v~r~~ 172 (173)
++.+++..+..|.|+|.|+.
T Consensus 225 ~~~~l~~~~~~v~l~V~R~g 244 (721)
T 2xkx_A 225 AVAALKNTYDVVYLKVAKPS 244 (721)
T ss_pred HHHHHHcCCCeEEEEEEeCC
Confidence 99999888999999998864
No 130
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.57 E-value=2e-14 Score=106.53 Aligned_cols=82 Identities=28% Similarity=0.410 Sum_probs=75.3
Q ss_pred CCEEEEEEccCCCcccEEEEccC-------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~ 160 (173)
+.+.++|.+.. .+|||++.++. ..++||..|.++++|+++| |+.||+|++|||.++.++++.+++..++..
T Consensus 5 ~~~~v~l~~~~-~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (196)
T 3gsl_A 5 EYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEA 83 (196)
T ss_dssp EEEEEEEECBT-TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EEEEEEEEECC-CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 56789999876 88999999876 3589999999999999999 999999999999999999999999999999
Q ss_pred CCeEEEEEEEC
Q psy7774 161 ADKVTVLAHSD 171 (173)
Q Consensus 161 g~~v~l~v~r~ 171 (173)
+..+.|++.|.
T Consensus 84 g~~v~l~v~r~ 94 (196)
T 3gsl_A 84 GSIVRLYVMRR 94 (196)
T ss_dssp CSEEEEEEEEE
T ss_pred CCcEEEEEEec
Confidence 99999999885
No 131
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.34 E-value=2e-16 Score=108.44 Aligned_cols=84 Identities=27% Similarity=0.419 Sum_probs=75.0
Q ss_pred CCCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCe
Q psy7774 87 SGEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 163 (173)
Q Consensus 87 ~~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~ 163 (173)
+..++.|.+.+....+|||.+.++. ..+++|..|.++|||++ +||++||+|++|||.++.+.++.+++.+++..++.
T Consensus 25 ~~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~ 104 (112)
T 2lob_A 25 FQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 104 (112)
Confidence 4567889998877789999999875 35799999999999999 89999999999999999999999999999888888
Q ss_pred EEEEEEE
Q psy7774 164 VTVLAHS 170 (173)
Q Consensus 164 v~l~v~r 170 (173)
+.|+|.+
T Consensus 105 v~l~V~~ 111 (112)
T 2lob_A 105 IEFEVVY 111 (112)
Confidence 8888865
No 132
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.57 E-value=7.2e-15 Score=98.45 Aligned_cols=83 Identities=23% Similarity=0.306 Sum_probs=72.8
Q ss_pred CCCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 87 SGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 87 ~~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
+.+.+.+.+.+.. .+|||.+.+. .+++|..|.++++|+++||+.||+|++|||..+.++++.++..+++..++.+.|
T Consensus 13 ~~~~~~v~l~~~~-~g~G~~~~~~--~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l 89 (100)
T 1whd_A 13 NGEKLQITIRRGK-DGFGFTICCD--SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIIL 89 (100)
T ss_dssp CCEEEEEEEECCS-SSSSCBCCCS--SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEE
T ss_pred ccceEEEEEECCC-CeeeEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 3456778888766 7999998764 579999999999999999999999999999999999999999999877788999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
+|.|+.
T Consensus 90 ~v~R~~ 95 (100)
T 1whd_A 90 LVWRVS 95 (100)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999874
No 133
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=3.6e-15 Score=99.27 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=72.4
Q ss_pred CCEEEEEEccCC-CcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRKC-SNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~-~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
.+++|.|.+... .+|||.+.+ ..+++|..|.++++|+ +||+.||+|++|||.++.++++.+++..++..++.+.|+
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~--~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 84 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE--SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSIT 84 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS--SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEE
T ss_pred ccEEEEEEECCCCCcccEEEec--CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 468889988763 389999986 5689999999999996 899999999999999999999999999998889999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
|.|+.
T Consensus 85 v~R~~ 89 (96)
T 2edv_A 85 VVRCT 89 (96)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99975
No 134
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2.2e-15 Score=105.09 Aligned_cols=84 Identities=23% Similarity=0.386 Sum_probs=74.5
Q ss_pred CCCEEEEEEccCCCcccEEEEcc------------------------------CCCCEEEEEecCCCcccccCCCCCCEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGG------------------------------NAVGIYVHSVQSGSLGYSAGLRTGDRI 137 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg------------------------------~~~~i~V~~v~~gs~A~~~gL~~gD~I 137 (173)
..+|.|+|.|.. .+|||++.+. ...+++|..|.+++||+++||+.||+|
T Consensus 7 ~~~r~v~l~r~~-~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I 85 (126)
T 2yuy_A 7 GGPKTVTLKRTS-QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAGLCTGDRI 85 (126)
T ss_dssp SSCCCEEEECCS-SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHTCCSSCCC
T ss_pred CCCEEEEEEECC-CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcCCCCCCEE
Confidence 367889999977 7999999751 124699999999999999999999999
Q ss_pred EEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 138 LEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 138 l~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
++|||.++.++++.+++.+++..+..+.|+|.|..
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 99999999999999999999988999999998864
No 135
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.55 E-value=6.1e-14 Score=97.12 Aligned_cols=83 Identities=25% Similarity=0.426 Sum_probs=72.2
Q ss_pred CCEEEEEEccCCCcccEEEEccCC-----CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC--C
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA-----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK--P 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~-----~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~ 160 (173)
+.+.+.+.+.. .+|||.+.++.. .+++|..|.+++||+++| |++||+|++|||.++.++++.++..+++. .
T Consensus 30 ~~~~v~l~~~~-~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 108 (121)
T 2kom_A 30 KRLNIQLKKGT-EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKM 108 (121)
T ss_dssp EEEEEEEECCT-TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCS
T ss_pred eEEEEEEEcCC-CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCC
Confidence 45667777755 799999987652 689999999999999999 99999999999999999999999988874 4
Q ss_pred CCeEEEEEEECC
Q psy7774 161 ADKVTVLAHSDT 172 (173)
Q Consensus 161 g~~v~l~v~r~~ 172 (173)
+..+.|+|.|+.
T Consensus 109 g~~v~l~v~R~g 120 (121)
T 2kom_A 109 EGTVSLLVFRQE 120 (121)
T ss_dssp SCEEEEEEEECC
T ss_pred CCEEEEEEEeCC
Confidence 899999999874
No 136
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.55 E-value=1.3e-13 Score=91.69 Aligned_cols=81 Identities=20% Similarity=0.272 Sum_probs=70.1
Q ss_pred CCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC--CCCeEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVT 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~~v~ 165 (173)
.+.+.+.+.+.. .+|||.+.+. ..+++|..|.++ |+.+||+.||+|++|||.++.+++|.+++.+++. .+..+.
T Consensus 9 ~~~~~v~l~~~~-~g~G~~i~~~-~~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~ 84 (96)
T 1ujv_A 9 AELMTLTIVKGA-QGFGFTIADS-PTGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETS 84 (96)
T ss_dssp CCCEEEEEECCS-SSSSEEEEEE-TTEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEE
T ss_pred ceEEEEEEEeCC-CceeEEEEcC-CCCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEE
Confidence 467889999876 8999999743 347999999983 6779999999999999999999999999999975 489999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|+|.|+.
T Consensus 85 l~v~R~g 91 (96)
T 1ujv_A 85 LIIHRGS 91 (96)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9999874
No 137
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.54 E-value=6.7e-14 Score=92.08 Aligned_cols=79 Identities=23% Similarity=0.386 Sum_probs=67.6
Q ss_pred CCEEEEEEccC-CCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 89 EPRFLMIETRK-CSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~-~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
+.+.+.+.+.. ..+|||.+.+| +|..|.++|+|+++||+.||+|++|||.++.+.++.++..+++..+..+.|+
T Consensus 11 ~~~~~~i~~~~~~~~lG~~~~~G-----~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~ 85 (90)
T 1y7n_A 11 NVTTVLIRRPDLRYQLGFSVQNG-----IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMK 85 (90)
T ss_dssp SCEEEEEEESSTTSCCCEEEETT-----EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEE
T ss_pred CcceEEEEeCCCccccCeEecCC-----EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 44555555533 57899998754 8999999999999999999999999999999999999999998889999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
|.+.+
T Consensus 86 v~p~s 90 (90)
T 1y7n_A 86 TMPAA 90 (90)
T ss_dssp EECCC
T ss_pred EEECc
Confidence 88653
No 138
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.54 E-value=4.5e-14 Score=92.46 Aligned_cols=76 Identities=25% Similarity=0.383 Sum_probs=66.4
Q ss_pred EEEEc-cCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEE
Q psy7774 93 LMIET-RKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHS 170 (173)
Q Consensus 93 v~l~~-~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r 170 (173)
+.+.+ .....|||.+.+ ++||..|.++|+|+++| |+.||+|++|||.++.++++++++.+++..++.+.|++.+
T Consensus 4 v~l~~~~~~~~~G~~~~~----gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~ 79 (88)
T 3e17_A 4 VLLMKSRANEEYGLRLGS----QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLR 79 (88)
T ss_dssp EEEECBTTBCCCCEEEEE----EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECC
T ss_pred EEEEeCCCCCCCCEEEeC----CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeC
Confidence 45554 335689999875 79999999999999998 9999999999999999999999999999889999999876
Q ss_pred CC
Q psy7774 171 DT 172 (173)
Q Consensus 171 ~~ 172 (173)
..
T Consensus 80 ~~ 81 (88)
T 3e17_A 80 DL 81 (88)
T ss_dssp C-
T ss_pred CC
Confidence 53
No 139
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.54 E-value=6.3e-14 Score=97.77 Aligned_cols=82 Identities=13% Similarity=0.139 Sum_probs=72.3
Q ss_pred CCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC--CCCeE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK--PADKV 164 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~~v 164 (173)
.....+.+.+.. .+|||.+.+. ..+++|..|.+++||+++| |+.||+|++|||..+.+.++.+++.+++. .|..|
T Consensus 26 ~~~~~~~l~k~~-~glG~~i~~~-~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v 103 (126)
T 1wif_A 26 NKVIQTKLTVGN-LGLGLVVIQN-GPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVL 103 (126)
T ss_dssp CCEEEEEEECCT-TCCCCCEEEE-TTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEE
T ss_pred CceEEEEEecCC-ceEeEEEEcC-CCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEE
Confidence 356778888766 8999998763 4579999999999999999 99999999999999999999999999975 68999
Q ss_pred EEEEEEC
Q psy7774 165 TVLAHSD 171 (173)
Q Consensus 165 ~l~v~r~ 171 (173)
.|+|.|+
T Consensus 104 ~l~V~R~ 110 (126)
T 1wif_A 104 QIKAYRG 110 (126)
T ss_dssp EEEEESS
T ss_pred EEEEEEC
Confidence 9999885
No 140
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.54 E-value=2e-13 Score=101.74 Aligned_cols=119 Identities=19% Similarity=0.367 Sum_probs=94.8
Q ss_pred CcccHHHHHHHHhhC--CCeEEEEEEeCCCccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCccccC
Q psy7774 2 RSATYQLAASVLRQC--GNSITMLVQYSPDKYHELEGSGSSSAENESVSGRGSGSPTPCNSPGTNRKSSIQHNTSTLTRT 79 (173)
Q Consensus 2 ~~~th~~av~~L~~~--g~~v~L~V~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 79 (173)
.+++|+++..+|+.. ++.|.|.|.|+..... .| .
T Consensus 70 ~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~-----------------------~~----~----------------- 105 (196)
T 1p1d_A 70 EDSTFEEANQLLRDSSITSKVTLEIEFDVAESV-----------------------IP----S----------------- 105 (196)
T ss_dssp TTSCHHHHHHHHHTCCSSSEEEEEEEECSCSCC-----------------------BC----C-----------------
T ss_pred CCCCHHHHHHHHHhCCCCCeEEEEEEecCCCCC-----------------------CC----C-----------------
Confidence 356899999999997 8899999998644210 00 0
Q ss_pred CCCCCCCCCCCEEEEEEccCCCcccEEEEccC----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHH
Q psy7774 80 HVCKDERSGEPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAA 154 (173)
Q Consensus 80 ~~~~~~~~~~~~~v~l~~~~~~~lG~~l~gg~----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~ 154 (173)
.....+.+.+.....|||.+.... ..+++|..|.++++|+++| |+.||+|++|||..+.++++.++.
T Consensus 106 --------~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 177 (196)
T 1p1d_A 106 --------SGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAV 177 (196)
T ss_dssp --------SSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHH
T ss_pred --------CCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 022455565444467999998753 3589999999999999999 999999999999999999999999
Q ss_pred HHHhCCCCeEEEEEEECC
Q psy7774 155 YELAKPADKVTVLAHSDT 172 (173)
Q Consensus 155 ~~l~~~g~~v~l~v~r~~ 172 (173)
.+++..+..+.|+|.|+.
T Consensus 178 ~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 178 QILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp HHHHHCTTCEEEEEECCC
T ss_pred HHHHhCCCEEEEEEEeCC
Confidence 999866999999999875
No 141
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.54 E-value=4.7e-14 Score=105.45 Aligned_cols=84 Identities=19% Similarity=0.293 Sum_probs=76.4
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCccccc-CCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~-gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
..++.|.|.+..+.+|||++.++. ..+++|..|.++++|+++ ||+.||+|++|||..+.+++|.++..+++..+..+
T Consensus 6 ~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 85 (200)
T 2qt5_A 6 KGSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERV 85 (200)
T ss_dssp EEEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEE
T ss_pred CCCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 357889998877799999999875 457999999999999998 99999999999999999999999999998899999
Q ss_pred EEEEEEC
Q psy7774 165 TVLAHSD 171 (173)
Q Consensus 165 ~l~v~r~ 171 (173)
.|++.|+
T Consensus 86 ~l~v~R~ 92 (200)
T 2qt5_A 86 VLEVEYE 92 (200)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 9999885
No 142
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.54 E-value=2.6e-14 Score=98.58 Aligned_cols=81 Identities=27% Similarity=0.372 Sum_probs=69.3
Q ss_pred CCEEEEEEccCCCcccEEEEccCC---CCEEEEEecCCCccccc-CCCCCCEEEEECCEecCCCCHHHHHHHHhCC----
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNA---VGIYVHSVQSGSLGYSA-GLRTGDRILEYNGTDLRAATAEEAAYELAKP---- 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~---~~i~V~~v~~gs~A~~~-gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~---- 160 (173)
..+.+.+.+. .+|||++.|+.+ ..++|..|.+++||+++ ||+.||+|++|||.++.+++|.+++.+++..
T Consensus 18 ~~~~~~~~~~--~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~ 95 (118)
T 1v6b_A 18 DVRLLRIKKE--GSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQG 95 (118)
T ss_dssp CEEEEEEESC--SCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHT
T ss_pred eEEEEEECCC--CccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcC
Confidence 3455666654 489999998763 35999999999999998 8999999999999999999999999888643
Q ss_pred CCeEEEEEEEC
Q psy7774 161 ADKVTVLAHSD 171 (173)
Q Consensus 161 g~~v~l~v~r~ 171 (173)
+..+.|+|.|.
T Consensus 96 g~~v~l~v~r~ 106 (118)
T 1v6b_A 96 GDWIDLVVAVC 106 (118)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 88999999985
No 143
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.54 E-value=6.1e-14 Score=99.46 Aligned_cols=84 Identities=32% Similarity=0.459 Sum_probs=72.4
Q ss_pred CCEEEEEEccC---CCcccEEEEccC--------------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHH
Q psy7774 89 EPRFLMIETRK---CSNLGISLVGGN--------------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAE 151 (173)
Q Consensus 89 ~~~~v~l~~~~---~~~lG~~l~gg~--------------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~ 151 (173)
..+.|.|.+.. ..+|||++.+|. ..+++|..|.+++||+++||+.||+|++|||..+.++++.
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~ 102 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHD 102 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH
T ss_pred ceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHH
Confidence 56778887743 137999998754 2689999999999999999999999999999999999999
Q ss_pred HHHHHHhC-CCCeEEEEEEECC
Q psy7774 152 EAAYELAK-PADKVTVLAHSDT 172 (173)
Q Consensus 152 ~~~~~l~~-~g~~v~l~v~r~~ 172 (173)
++..+++. .|..+.|+|.|+.
T Consensus 103 ~~~~~l~~~~g~~v~l~v~R~g 124 (139)
T 2vz5_A 103 QARKRLTKRSEEVVRLLVTRQS 124 (139)
T ss_dssp HHHHHHCCTTCSEEEEEEEECC
T ss_pred HHHHHHHhCCCCEEEEEEEECC
Confidence 99999975 6789999999874
No 144
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.53 E-value=1.3e-13 Score=103.33 Aligned_cols=84 Identities=19% Similarity=0.274 Sum_probs=75.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccCC----CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCC--CCHHHHHHHHhCC
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGNA----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRA--ATAEEAAYELAKP 160 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~~----~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~--~~~~~~~~~l~~~ 160 (173)
.+...+.+.+.. .+|||++.+|.+ .+++|..|.++++|+++| |+.||+|++|||..+.+ +++.+++..++..
T Consensus 17 ~~~~~v~~~~~~-~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~ 95 (206)
T 3r0h_A 17 NKKILIELKVEK-KPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTT 95 (206)
T ss_dssp TSCEEEEEECTT-SCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSC
T ss_pred CCEEEEEEEeCC-CCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhc
Confidence 467889999865 899999998763 489999999999999987 99999999999999999 9999999999988
Q ss_pred CCe-EEEEEEECC
Q psy7774 161 ADK-VTVLAHSDT 172 (173)
Q Consensus 161 g~~-v~l~v~r~~ 172 (173)
++. +.|+|.|+.
T Consensus 96 ~~~~v~l~v~R~~ 108 (206)
T 3r0h_A 96 YEKAVTLTVFRAD 108 (206)
T ss_dssp CSSEEEEEEECCS
T ss_pred CCCceEEEEEecc
Confidence 877 999998863
No 145
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=3.2e-14 Score=95.29 Aligned_cols=84 Identities=38% Similarity=0.559 Sum_probs=70.8
Q ss_pred CCCEEEEEEcc-CCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE
Q psy7774 88 GEPRFLMIETR-KCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV 164 (173)
Q Consensus 88 ~~~~~v~l~~~-~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v 164 (173)
.+++.+.+.+. ...+|||.+.++. ..+++|..|.++++|+++||+.||+|++|||..+.++++.+++..++ .+..+
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~-~~~~v 85 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAVKALK-GSKKL 85 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHHHHSS-SSSSC
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHhhc-CCCeE
Confidence 36788888873 3579999998875 46899999999999999999999999999999999999977765554 45688
Q ss_pred EEEEEECC
Q psy7774 165 TVLAHSDT 172 (173)
Q Consensus 165 ~l~v~r~~ 172 (173)
.|+|.|+.
T Consensus 86 ~l~v~R~g 93 (101)
T 1uez_A 86 VLSVYSAG 93 (101)
T ss_dssp CEEECCCC
T ss_pred EEEEEECC
Confidence 89998763
No 146
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.53 E-value=9.9e-14 Score=94.87 Aligned_cols=83 Identities=29% Similarity=0.458 Sum_probs=72.0
Q ss_pred CCCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVT 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~ 165 (173)
..++.+.+.+....+|||.+.++. ..+++|..|.++++|+++||+.||+|++|||..+.++.+.+++..++.. ..+.
T Consensus 14 ~~~~~v~~~~~~~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~v~ 92 (114)
T 1x5n_A 14 NKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-RSLT 92 (114)
T ss_dssp CSSEEEEECCCSSCCCCEEEEECCSSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC-SSEE
T ss_pred CCcEEEEEEEcCCCceeEEEeecCCCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CeEE
Confidence 356888887767789999999765 4689999999999999999999999999999999999988888777654 6889
Q ss_pred EEEEEC
Q psy7774 166 VLAHSD 171 (173)
Q Consensus 166 l~v~r~ 171 (173)
|+|.|+
T Consensus 93 l~v~r~ 98 (114)
T 1x5n_A 93 ISIVAA 98 (114)
T ss_dssp EEECSS
T ss_pred EEEEcC
Confidence 998876
No 147
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.53 E-value=1.2e-13 Score=92.78 Aligned_cols=80 Identities=34% Similarity=0.485 Sum_probs=67.1
Q ss_pred EEEEEccC---CCcccEEEEccC--------------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHH
Q psy7774 92 FLMIETRK---CSNLGISLVGGN--------------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAA 154 (173)
Q Consensus 92 ~v~l~~~~---~~~lG~~l~gg~--------------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~ 154 (173)
.+.+.+.. ..+|||++.|+. ..+++|..|.++|||+++||+.||+|++|||..+.++++.+++
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~ 86 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQAR 86 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 45555432 237999999654 3479999999999999999999999999999999999999999
Q ss_pred HHHhC-CCCeEEEEEEEC
Q psy7774 155 YELAK-PADKVTVLAHSD 171 (173)
Q Consensus 155 ~~l~~-~g~~v~l~v~r~ 171 (173)
..++. .+..+.|++.|.
T Consensus 87 ~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 87 KRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHTCTTCSEEEEEEEEC
T ss_pred HHHHhCCCCEEEEEEEcC
Confidence 99974 678999999884
No 148
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.52 E-value=2e-13 Score=92.99 Aligned_cols=82 Identities=21% Similarity=0.221 Sum_probs=72.7
Q ss_pred EEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCC-CCCCEEEEECCEecCCCCHHHHHHHHh-CCCCeEEEE
Q psy7774 91 RFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGL-RTGDRILEYNGTDLRAATAEEAAYELA-KPADKVTVL 167 (173)
Q Consensus 91 ~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL-~~gD~Il~Vng~~~~~~~~~~~~~~l~-~~g~~v~l~ 167 (173)
.+|.|.++...+|||.+.+.. ..+++|..|.+++||+++|| +.||+|++|||..+.++++.++..+++ ..+..+.|+
T Consensus 3 ~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~ 82 (112)
T 1qau_A 3 ISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVL 82 (112)
T ss_dssp EEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEE
T ss_pred EEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEE
Confidence 568888877789999998765 46899999999999999997 999999999999999999999998886 467899999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
+.|+.
T Consensus 83 v~R~g 87 (112)
T 1qau_A 83 ILRGP 87 (112)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99874
No 149
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.51 E-value=1.6e-13 Score=90.86 Aligned_cols=82 Identities=26% Similarity=0.322 Sum_probs=67.9
Q ss_pred CCEEEEEEccCC--CcccEEEEccC---CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCe
Q psy7774 89 EPRFLMIETRKC--SNLGISLVGGN---AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 163 (173)
Q Consensus 89 ~~~~v~l~~~~~--~~lG~~l~gg~---~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~ 163 (173)
..+.+.|.|.+. .+|||++.... ..+++|..|.+++||+++||+.||+|++|||.++.++++.++..+++ ...
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~--~~~ 83 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLS--QPS 83 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHH--SSE
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCe
Confidence 568899998763 48999998744 34899999999999999999999999999999999999999988887 457
Q ss_pred EEEEEEECC
Q psy7774 164 VTVLAHSDT 172 (173)
Q Consensus 164 v~l~v~r~~ 172 (173)
+.|+|+..+
T Consensus 84 l~ltV~~~p 92 (94)
T 3kzd_A 84 LGLLVRTYP 92 (94)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 888887654
No 150
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.50 E-value=2.2e-13 Score=94.92 Aligned_cols=83 Identities=22% Similarity=0.370 Sum_probs=72.7
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCC-CCeEE
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP-ADKVT 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~-g~~v~ 165 (173)
..++.+.+.+.. .+|||.+.++. ..+++|..|.++++|+++||+.||+|++|||..+.++++.++..+++.. +..+.
T Consensus 8 ~~~r~v~l~~~~-~g~G~~l~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~ 86 (128)
T 2kjd_A 8 LRPRLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (128)
T ss_dssp CCCEEEEEECCS-SSCCEEEEECSSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEE
T ss_pred CCcEEEEEecCC-CcccEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEE
Confidence 368999999987 79999998766 4589999999999999999999999999999999999999999998765 55667
Q ss_pred EEEEEC
Q psy7774 166 VLAHSD 171 (173)
Q Consensus 166 l~v~r~ 171 (173)
|++.|+
T Consensus 87 l~v~R~ 92 (128)
T 2kjd_A 87 LVVDRE 92 (128)
T ss_dssp EEECHH
T ss_pred EEEEeC
Confidence 888764
No 151
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.50 E-value=7.7e-14 Score=116.48 Aligned_cols=80 Identities=34% Similarity=0.536 Sum_probs=74.4
Q ss_pred CEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC--CCCeEEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVTVL 167 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~~v~l~ 167 (173)
++.|.+.+. .+|||.+.||+..|+||..|.+||||+++||+.||+|++|||.++.++++++++.+++. +|+.|.|+
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~ 79 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL 79 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEETTTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEE
T ss_pred ceEEEEecC--CccceEEEccCcCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 477888884 79999999998889999999999999999999999999999999999999999999976 89999999
Q ss_pred EEEC
Q psy7774 168 AHSD 171 (173)
Q Consensus 168 v~r~ 171 (173)
|+|+
T Consensus 80 V~r~ 83 (468)
T 3shw_A 80 AQKK 83 (468)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9986
No 152
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.49 E-value=1.8e-13 Score=101.70 Aligned_cols=69 Identities=28% Similarity=0.385 Sum_probs=64.7
Q ss_pred CcccEEEEccC----------CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEE
Q psy7774 101 SNLGISLVGGN----------AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHS 170 (173)
Q Consensus 101 ~~lG~~l~gg~----------~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r 170 (173)
.+|||+|.||. ..+++|..|.++++|++ ||+.||+|++|||.++.++++.+++..++..+..+.|+|.|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 68999999974 35899999999999999 99999999999999999999999999999888899999998
No 153
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=9.8e-14 Score=95.22 Aligned_cols=82 Identities=26% Similarity=0.338 Sum_probs=70.7
Q ss_pred CCEEEEEEccCCC--cccEEEEccCC---CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCe
Q psy7774 89 EPRFLMIETRKCS--NLGISLVGGNA---VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADK 163 (173)
Q Consensus 89 ~~~~v~l~~~~~~--~lG~~l~gg~~---~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~ 163 (173)
.++.+.|.|.... +|||++.+... .+++|..|.++++|+++||+.||+|++|||.++.++++.++..+++. ..
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~~ 92 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ--PS 92 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS--SE
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC--Cc
Confidence 5788999987743 79999986442 47999999999999999999999999999999999999899888874 48
Q ss_pred EEEEEEECC
Q psy7774 164 VTVLAHSDT 172 (173)
Q Consensus 164 v~l~v~r~~ 172 (173)
+.|+|+|.+
T Consensus 93 v~l~v~R~p 101 (114)
T 2d8i_A 93 LGLLVRTYP 101 (114)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 999999864
No 154
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.48 E-value=4e-14 Score=95.26 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=70.2
Q ss_pred CEEEEEEccCCCcccEEEEccCC--CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGNA--VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~~--~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
.+.+.+. .. .+|||.+.++.+ .+++|..|.+++||+++||+.||+|++|||..+.++++.++..+++..+..+.|+
T Consensus 6 ~~~v~~~-~~-~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 83 (103)
T 1v5l_A 6 SGNVVLP-GP-APWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK 83 (103)
T ss_dssp CBCCEEE-SS-SCCSBCCEEETTTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECE
T ss_pred EEEEEEc-CC-CCcCEEEeccccCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 4445554 33 699999988763 4799999999999999999999999999999999999999999998779999999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
|.|+.
T Consensus 84 v~R~g 88 (103)
T 1v5l_A 84 IDRAE 88 (103)
T ss_dssp ECCCT
T ss_pred EEECC
Confidence 98864
No 155
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.48 E-value=1.8e-13 Score=95.29 Aligned_cols=84 Identities=20% Similarity=0.216 Sum_probs=74.9
Q ss_pred CCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCC-CCCCEEEEECCEecCCCCHHHHHHHHhC-CCCeEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGL-RTGDRILEYNGTDLRAATAEEAAYELAK-PADKVT 165 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL-~~gD~Il~Vng~~~~~~~~~~~~~~l~~-~g~~v~ 165 (173)
+++.|.+.++...+|||.+.+.. ..+++|..|.++++|+++|| +.||+|++|||..+.++++.++..+++. .+..+.
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 87 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV 87 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEE
T ss_pred ceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEE
Confidence 57889999887789999998765 35899999999999999998 9999999999999999999999998874 578999
Q ss_pred EEEEECC
Q psy7774 166 VLAHSDT 172 (173)
Q Consensus 166 l~v~r~~ 172 (173)
|++.|+.
T Consensus 88 l~v~R~g 94 (127)
T 1b8q_A 88 VLILRGP 94 (127)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9998864
No 156
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.48 E-value=2.1e-13 Score=101.64 Aligned_cols=84 Identities=26% Similarity=0.358 Sum_probs=75.3
Q ss_pred CCEEEEEEccCCCcccEEEEccC------CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCC-
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN------AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKP- 160 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~------~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~- 160 (173)
+.++|.|.+....+|||.+.++. ..+++|..|.+++||+++| |+.||+|++|||..+.++++.++..+++..
T Consensus 6 ~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 85 (196)
T 1p1d_A 6 ETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSS 85 (196)
T ss_dssp EEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCC
T ss_pred EEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 56889999987799999999873 3579999999999999999 999999999999999999999999888765
Q ss_pred -CCeEEEEEEECC
Q psy7774 161 -ADKVTVLAHSDT 172 (173)
Q Consensus 161 -g~~v~l~v~r~~ 172 (173)
+..+.|++.|+.
T Consensus 86 ~g~~v~l~v~R~~ 98 (196)
T 1p1d_A 86 ITSKVTLEIEFDV 98 (196)
T ss_dssp SSSEEEEEEEECS
T ss_pred CCCeEEEEEEecC
Confidence 889999998864
No 157
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=6.4e-13 Score=92.69 Aligned_cols=83 Identities=27% Similarity=0.457 Sum_probs=70.8
Q ss_pred CCEEEEEEccCCCcccEEEEccC--CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN--AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~--~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l 166 (173)
+++++.+......+|||.+.++. ..+++|..|.++++|+++||+.||+|++|||..+.++++.+++..++. +..+.|
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~v~l 98 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS-SRHLIL 98 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT-CSEEEE
T ss_pred cEEEEEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCeEEE
Confidence 56778887655578999998865 358999999999999999999999999999999999999878777665 579999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
+|.|+.
T Consensus 99 ~v~R~g 104 (128)
T 1uf1_A 99 TVKDVG 104 (128)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 999864
No 158
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.46 E-value=3.2e-13 Score=110.76 Aligned_cols=81 Identities=33% Similarity=0.525 Sum_probs=74.0
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTV 166 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l 166 (173)
.++.|.+.+. .+|||++.+|...|++|..|.+||||+++||+.||+|++|||.++.++++++++..++ ..|..+.|
T Consensus 9 ~~~~v~~~k~--~~lG~~i~gg~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l 86 (391)
T 3tsz_A 9 SMKLVKFRKG--DSVGLRLAGGNDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 86 (391)
T ss_dssp CEEEEEEECC--SSCCEEEEEETTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEE
T ss_pred CcEEEEeecC--CceeEEEEecCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEE
Confidence 4567777775 4799999998889999999999999999999999999999999999999999999998 58999999
Q ss_pred EEEEC
Q psy7774 167 LAHSD 171 (173)
Q Consensus 167 ~v~r~ 171 (173)
++.|+
T Consensus 87 ~v~r~ 91 (391)
T 3tsz_A 87 LAQKK 91 (391)
T ss_dssp EEEEC
T ss_pred EEeeC
Confidence 99986
No 159
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.46 E-value=3.5e-14 Score=97.00 Aligned_cols=82 Identities=24% Similarity=0.298 Sum_probs=70.5
Q ss_pred CCCCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCC-CCeEE
Q psy7774 87 SGEPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP-ADKVT 165 (173)
Q Consensus 87 ~~~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~-g~~v~ 165 (173)
+..+|.|.|.+.. .+|||.+.+. .+++|..|.++++|+++||+.||+|++|||..+.++++.++..+++.. +..+.
T Consensus 13 ~~~~r~v~l~~~~-~~~G~~l~~~--~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~ 89 (111)
T 1vae_A 13 WSPPRGIHFTVEE-GDLGFTLRGN--TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVE 89 (111)
T ss_dssp ECCCCCCCEECCS-SCCSCCEESS--SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEEC
T ss_pred CCCCeEEEEEcCC-CcccEEEeCC--CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEE
Confidence 3467888999865 8999999764 478999999999999999999999999999999999999999888754 45689
Q ss_pred EEEEEC
Q psy7774 166 VLAHSD 171 (173)
Q Consensus 166 l~v~r~ 171 (173)
|+|.|.
T Consensus 90 l~V~~~ 95 (111)
T 1vae_A 90 MKVVSL 95 (111)
T ss_dssp EEEECE
T ss_pred EEEEec
Confidence 988764
No 160
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.44 E-value=1.7e-12 Score=85.20 Aligned_cols=79 Identities=22% Similarity=0.392 Sum_probs=66.8
Q ss_pred CEEEEEEccC-CCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEE
Q psy7774 90 PRFLMIETRK-CSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVL 167 (173)
Q Consensus 90 ~~~v~l~~~~-~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~ 167 (173)
+..+.+.+.. ...|||.+. .+++|..|.++++|+++| |+.||+|++|||..+.++++.++..+++..++.+.|+
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~ 78 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMV 78 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE----EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEE
T ss_pred cEEEEEEeCCCCCCCCEEEe----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEE
Confidence 4566665533 468999876 479999999999999999 9999999999999999999999999998877899999
Q ss_pred EEECC
Q psy7774 168 AHSDT 172 (173)
Q Consensus 168 v~r~~ 172 (173)
+.|+.
T Consensus 79 v~r~g 83 (92)
T 3cyy_A 79 VQRDE 83 (92)
T ss_dssp EEC--
T ss_pred EEeCC
Confidence 98863
No 161
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.43 E-value=9.3e-13 Score=86.19 Aligned_cols=81 Identities=20% Similarity=0.254 Sum_probs=67.2
Q ss_pred EEEEEEccCCC--cccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEE
Q psy7774 91 RFLMIETRKCS--NLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTV 166 (173)
Q Consensus 91 ~~v~l~~~~~~--~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l 166 (173)
+.+.+.+.++. .|||.+... ..+++|..|.+++||+++||+.||+|++|||..+.+.++.++..+++ ..+..+.|
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l 83 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWD-IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVM 83 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEE-TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEE
T ss_pred eEEEEEecCCCCCcccEEEEec-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEE
Confidence 44566655433 799998743 45899999999999999999999999999999998788888888886 36899999
Q ss_pred EEEECC
Q psy7774 167 LAHSDT 172 (173)
Q Consensus 167 ~v~r~~ 172 (173)
+|.|+.
T Consensus 84 ~v~R~g 89 (90)
T 2eaq_A 84 DVRRYG 89 (90)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 999864
No 162
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.40 E-value=3.2e-12 Score=81.66 Aligned_cols=73 Identities=25% Similarity=0.461 Sum_probs=63.0
Q ss_pred EEccCCCcccEEEEccCCCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEEC
Q psy7774 95 IETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSD 171 (173)
Q Consensus 95 l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~ 171 (173)
+.......|||.+. .+++|..|.++++|+++| |+.||+|++|||.++.++++.++..+++..++.+.|++.|+
T Consensus 7 ~~~~~~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 7 VKSRKNEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp ECCSTTCCCCEEEE----EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred EECCCCCCCCEEEe----CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 33444578999876 469999999999999999 99999999999999999999999999987777999999875
No 163
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.40 E-value=2.1e-13 Score=103.42 Aligned_cols=83 Identities=23% Similarity=0.392 Sum_probs=73.1
Q ss_pred CCCEEEEEEccCCCcccEEEEccC-CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeE-E
Q psy7774 88 GEPRFLMIETRKCSNLGISLVGGN-AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKV-T 165 (173)
Q Consensus 88 ~~~~~v~l~~~~~~~lG~~l~gg~-~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v-~ 165 (173)
..++.|.|.+.. .+|||.+.++. ..+++|..|.+|++|+++||+.||+|++|||..+.++++.+++.+++..+..+ .
T Consensus 8 ~~~r~v~l~k~~-~glG~~l~~~~~~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~~v~~ 86 (216)
T 2krg_A 8 LRPRLCTMKKGP-SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKL 86 (216)
T ss_dssp CCCEEEEEECCS-SSSCEEECCCSSSCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCSEEEE
T ss_pred cceEEEEEEeCC-CCceEEEEecCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCeEEE
Confidence 468999999877 79999998766 45899999999999999999999999999999999999999998887668888 7
Q ss_pred EEEEEC
Q psy7774 166 VLAHSD 171 (173)
Q Consensus 166 l~v~r~ 171 (173)
|+|.|.
T Consensus 87 l~V~R~ 92 (216)
T 2krg_A 87 LVVDRE 92 (216)
T ss_dssp EECCHH
T ss_pred EEEEEC
Confidence 777653
No 164
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.40 E-value=4.2e-12 Score=92.25 Aligned_cols=82 Identities=27% Similarity=0.414 Sum_probs=70.7
Q ss_pred CCEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh-CCCCeEEEE
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA-KPADKVTVL 167 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~-~~g~~v~l~ 167 (173)
+++.|.|.+....+|||.+... ..+++|..|.+++||+++||+.||+|++|||..+.+++++....+++ ..+..+.|+
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~-~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~ 82 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSI-DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMT 82 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEE-TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEE
T ss_pred CCEEEEEEeCCCCcEeEEEEeC-CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEE
Confidence 6899999997768999999864 46899999999999999999999999999999999999866666665 467799999
Q ss_pred EEEC
Q psy7774 168 AHSD 171 (173)
Q Consensus 168 v~r~ 171 (173)
++|.
T Consensus 83 vr~~ 86 (166)
T 1w9e_A 83 IRDR 86 (166)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9543
No 165
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.35 E-value=5.7e-12 Score=84.05 Aligned_cols=80 Identities=24% Similarity=0.322 Sum_probs=67.2
Q ss_pred CEEEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC---CCCeEEE
Q psy7774 90 PRFLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK---PADKVTV 166 (173)
Q Consensus 90 ~~~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~---~g~~v~l 166 (173)
...+.+.+.. .+|||.+.. ...+.+|..|.+||||+++||++||+|++|||..+...+++++...++. .++.+.|
T Consensus 18 ~~~l~l~~~~-~g~G~~l~~-~~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~L 95 (101)
T 3qik_A 18 AKRLLILPQE-EDYGFDIEE-KNKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRL 95 (101)
T ss_dssp EEEEEECCCS-SSSSEEEEE-ETTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEE
T ss_pred cCeEEEEeCC-CcccEEEEc-cCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEE
Confidence 3456666654 899999975 3456889999999999999999999999999999988899999988875 6999999
Q ss_pred EEEEC
Q psy7774 167 LAHSD 171 (173)
Q Consensus 167 ~v~r~ 171 (173)
.|...
T Consensus 96 LV~~~ 100 (101)
T 3qik_A 96 LVATK 100 (101)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 88643
No 166
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.34 E-value=7.2e-12 Score=86.32 Aligned_cols=83 Identities=25% Similarity=0.335 Sum_probs=66.0
Q ss_pred CEEEEEEc---cCCCcccEEEEcc-----CCCCEEEEEecC--CCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC
Q psy7774 90 PRFLMIET---RKCSNLGISLVGG-----NAVGIYVHSVQS--GSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK 159 (173)
Q Consensus 90 ~~~v~l~~---~~~~~lG~~l~gg-----~~~~i~V~~v~~--gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~ 159 (173)
++.|++.+ ...+.|||.+... ...+++|..|.+ +++|+++||+.||+|++|||..+.++++.++..+++.
T Consensus 13 ~~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~ 92 (118)
T 2yub_A 13 PYSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQ 92 (118)
T ss_dssp CCEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHC
T ss_pred CceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHh
Confidence 45555554 3234556665422 136899999999 9999999999999999999999999999999988876
Q ss_pred CCCeEEEEEEECC
Q psy7774 160 PADKVTVLAHSDT 172 (173)
Q Consensus 160 ~g~~v~l~v~r~~ 172 (173)
.+..+.|+|.|+.
T Consensus 93 ~g~~v~l~v~R~g 105 (118)
T 2yub_A 93 TSQTLQLLIEHDP 105 (118)
T ss_dssp CSSCEEEEEEECS
T ss_pred CCCEEEEEEEECC
Confidence 6889999999864
No 167
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=5.2e-12 Score=87.63 Aligned_cols=80 Identities=24% Similarity=0.439 Sum_probs=65.7
Q ss_pred EEEEEEccC-CCcccEEEEccCC----CCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC-CCCe
Q psy7774 91 RFLMIETRK-CSNLGISLVGGNA----VGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK-PADK 163 (173)
Q Consensus 91 ~~v~l~~~~-~~~lG~~l~gg~~----~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~-~g~~ 163 (173)
+.+.+.+.. ..+|||.+..... .+++|..|.++++|+++| |+.||+|++|||..+.+ +.++..+++. .+..
T Consensus 21 ~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~ 98 (124)
T 1wh1_A 21 EEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVALLTSEENKN 98 (124)
T ss_dssp CCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHHHHTCSSCCS
T ss_pred EEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCCE
Confidence 345555543 3589999987653 689999999999999999 99999999999999974 7788888875 4789
Q ss_pred EEEEEEECC
Q psy7774 164 VTVLAHSDT 172 (173)
Q Consensus 164 v~l~v~r~~ 172 (173)
+.|+|.|+.
T Consensus 99 v~l~v~R~g 107 (124)
T 1wh1_A 99 FSLLIARPE 107 (124)
T ss_dssp CCEEEEECS
T ss_pred EEEEEEECC
Confidence 999999864
No 168
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.25 E-value=4.7e-12 Score=103.78 Aligned_cols=84 Identities=21% Similarity=0.260 Sum_probs=72.6
Q ss_pred CCEEEEEEccCCCcccEEEEccC----CCCEEEEEecCCCcccccC-CCCCCEEEEECCEecCCCCHHHHHHHHhC--CC
Q psy7774 89 EPRFLMIETRKCSNLGISLVGGN----AVGIYVHSVQSGSLGYSAG-LRTGDRILEYNGTDLRAATAEEAAYELAK--PA 161 (173)
Q Consensus 89 ~~~~v~l~~~~~~~lG~~l~gg~----~~~i~V~~v~~gs~A~~~g-L~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g 161 (173)
..+.|.+.+..+++|||.+.+.. ..+++|..|.+||||+++| |+.||+|++|||.++.++++.+++.+++. .+
T Consensus 204 ~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~ 283 (388)
T 3suz_A 204 NCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQ 283 (388)
T ss_dssp CCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTC
T ss_pred cceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCC
Confidence 56889999987789999998743 2368999999999999988 99999999999999999999999988876 45
Q ss_pred CeEEEEEEECC
Q psy7774 162 DKVTVLAHSDT 172 (173)
Q Consensus 162 ~~v~l~v~r~~ 172 (173)
..+.|++.|..
T Consensus 284 ~~v~l~v~r~~ 294 (388)
T 3suz_A 284 TQVKLNIVSCP 294 (388)
T ss_dssp SCEEEEEEECC
T ss_pred Ccccccccccc
Confidence 67999998863
No 169
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.25 E-value=1.4e-12 Score=106.90 Aligned_cols=65 Identities=26% Similarity=0.472 Sum_probs=0.0
Q ss_pred CcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEE
Q psy7774 101 SNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHS 170 (173)
Q Consensus 101 ~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r 170 (173)
.+|||.+.++ +|..|.+||+|+++||++||+|++|||.++.++++++++.+++..++.+.|++.+
T Consensus 308 ~~lG~~i~~g-----~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p 372 (388)
T 3suz_A 308 YQLGFSVQNG-----IICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMP 372 (388)
T ss_dssp ----------------------------------------------------------------------
T ss_pred CccceEEecC-----EEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEe
Confidence 5789988754 8999999999999999999999999999999999999999999999999888754
No 170
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.21 E-value=6.1e-10 Score=80.70 Aligned_cols=74 Identities=20% Similarity=0.259 Sum_probs=61.7
Q ss_pred EEEEEccCCCcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEE
Q psy7774 92 FLMIETRKCSNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHS 170 (173)
Q Consensus 92 ~v~l~~~~~~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r 170 (173)
++.+.+.....|||.+.. + +|..+.++++|+++||+.||+|++|||..+.++.+..+...+.+.+..+.+.+..
T Consensus 91 ~v~l~~~~~~~lG~~~~~----g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 91 TITMHKDSTGHVGFIFKN----G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EEEEECCTTSCCSEEEET----T-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEecCCCCcEeEEEeC----C-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEEE
Confidence 344443334678998873 3 8999999999999999999999999999999999999888888888988887753
No 171
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.91 E-value=4.6e-09 Score=69.91 Aligned_cols=58 Identities=26% Similarity=0.332 Sum_probs=48.3
Q ss_pred CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 112 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 112 ~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
..|++|..|.+++||+. ||+.||+|++|||..+.++ .+....+. ..+..+.|++.|+.
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g 65 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSS--QEFIDYIHSKKVGDTVKINYKHGD 65 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSH--HHHHHHHHTSCTTCEEEEEEEETT
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECC
Confidence 45899999999999996 9999999999999999765 45555554 46889999999863
No 172
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.90 E-value=5.4e-09 Score=73.32 Aligned_cols=58 Identities=21% Similarity=0.240 Sum_probs=48.6
Q ss_pred CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 112 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 112 ~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
..+++|..|.++|||+ +||+.||+|++|||..+.++. +....+. ..|+.+.|++.|+.
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g 115 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASST--DLQSALYNHSIGDTIKITYYRNG 115 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHH--HHHHHHHHSSTTCEEEEEEEETT
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHH--HHHHHHHhCCCCCEEEEEEEECC
Confidence 3689999999999999 999999999999999998754 4444443 37899999999864
No 173
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.87 E-value=2.9e-09 Score=70.15 Aligned_cols=58 Identities=29% Similarity=0.410 Sum_probs=48.7
Q ss_pred CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 112 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 112 ~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
..+++|..|.++|||+. ||+.||+|++|||..+.++ .+...++. ..|+.+.|++.|+.
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 63 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDR 63 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETT
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECC
Confidence 35789999999999999 9999999999999999764 45555554 36899999999864
No 174
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.85 E-value=7.2e-10 Score=72.76 Aligned_cols=56 Identities=27% Similarity=0.434 Sum_probs=48.0
Q ss_pred CEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhC--CCCeEEEEEEECC
Q psy7774 114 GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAK--PADKVTVLAHSDT 172 (173)
Q Consensus 114 ~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~--~g~~v~l~v~r~~ 172 (173)
|++|..|.++|||++ ||+.||+|++|||..+.+ ..+...++.. .|+.+.|++.|+.
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREE 59 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSS
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECC
Confidence 578899999999999 999999999999999975 4566667754 5899999999864
No 175
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.84 E-value=5.2e-09 Score=78.64 Aligned_cols=60 Identities=30% Similarity=0.261 Sum_probs=51.7
Q ss_pred CCCEEEEEecCCCcccccCCCCC-CEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEEC
Q psy7774 112 AVGIYVHSVQSGSLGYSAGLRTG-DRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSD 171 (173)
Q Consensus 112 ~~~i~V~~v~~gs~A~~~gL~~g-D~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~ 171 (173)
..|++|..|.++|||+++||+.| |+|++|||..+.++.+..........+..+.|++.|.
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 75 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSS 75 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEET
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEec
Confidence 56899999999999999999999 9999999999998876554334456789999999886
No 176
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.84 E-value=9.9e-09 Score=69.60 Aligned_cols=58 Identities=28% Similarity=0.377 Sum_probs=49.4
Q ss_pred CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 112 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 112 ~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
..+++|..|.++|||+++||+.||.|++|||..+.+ ..+....++. +..+.|++.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g 91 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGR 91 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHHH-CSSEEEEEEETT
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECC
Confidence 468999999999999999999999999999999975 4566666654 688999998863
No 177
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.82 E-value=8.8e-09 Score=67.98 Aligned_cols=55 Identities=15% Similarity=0.206 Sum_probs=45.4
Q ss_pred EEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh-CC-CCeEEEEEEECC
Q psy7774 116 YVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA-KP-ADKVTVLAHSDT 172 (173)
Q Consensus 116 ~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~-~~-g~~v~l~v~r~~ 172 (173)
+|..|.++|+|+++||+.||+|++|||..+.++ .+....+. .. +..+.|+|.|+.
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDW--DAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSH--HHHHHHHHHTTTCSEEEEEEECTT
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHHhcCCCcEEEEEEECC
Confidence 688999999999999999999999999999765 45555553 33 478999999874
No 178
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.82 E-value=8.7e-08 Score=71.92 Aligned_cols=68 Identities=22% Similarity=0.178 Sum_probs=52.5
Q ss_pred CcccEEEEcc-----CCCCEEEEEecCCCcccccCCCC-CCEEEEECCEecCCCCHHHHHHHHh-CCCCeEEEEEEEC
Q psy7774 101 SNLGISLVGG-----NAVGIYVHSVQSGSLGYSAGLRT-GDRILEYNGTDLRAATAEEAAYELA-KPADKVTVLAHSD 171 (173)
Q Consensus 101 ~~lG~~l~gg-----~~~~i~V~~v~~gs~A~~~gL~~-gD~Il~Vng~~~~~~~~~~~~~~l~-~~g~~v~l~v~r~ 171 (173)
..||+.+..- ...+++|..|.++|||+++||+. ||+|++|||. +.+... ....++ ..+..+.|+|.|.
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~--l~~~l~~~~g~~v~l~v~r~ 169 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESED--LFSLIETHEAKPLKLYVYNT 169 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSC--HHHHHHHTTTSCEEEEEEET
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHH--HHHHHHhCCCCeEEEEEEEC
Confidence 4677777531 13689999999999999999999 9999999997 765543 333443 3788999999885
No 179
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.81 E-value=2.7e-08 Score=81.36 Aligned_cols=73 Identities=21% Similarity=0.348 Sum_probs=63.1
Q ss_pred CCcccEEEEcc--CCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh-CCCCeEEEEEEECC
Q psy7774 100 CSNLGISLVGG--NAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA-KPADKVTVLAHSDT 172 (173)
Q Consensus 100 ~~~lG~~l~gg--~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~-~~g~~v~l~v~r~~ 172 (173)
..++|+.+... ...+++|..|.+++||+++||+.||+|++|||..+.+++..++..+++ ..|..|.|+|.|..
T Consensus 84 ~~giG~~~~~~~~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g 159 (388)
T 1fc6_A 84 VTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG 159 (388)
T ss_dssp CBBCSEEEEECTTCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETT
T ss_pred eEEEEEEEEEeecCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 35889988753 246899999999999999999999999999999999998888888886 56889999998863
No 180
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.80 E-value=6.7e-09 Score=67.33 Aligned_cols=58 Identities=22% Similarity=0.271 Sum_probs=46.6
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
.|+.|..+.++++|+++||+.||+|++|||..+.++ .+...++. ..++.+.|++.|+.
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCH--HHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence 467788888888889999999999999999999765 44444454 36789999998864
No 181
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.74 E-value=2.4e-08 Score=67.60 Aligned_cols=58 Identities=24% Similarity=0.375 Sum_probs=48.5
Q ss_pred CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 112 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 112 ~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
..+++|..|.++++|+++||+.||+|++|||..+.++ .+....++ .+..+.|++.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~-~g~~v~l~v~R~g 91 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS--SELQEAVL-TESPLLLEVRRGN 91 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHH-HCSSEEEEEEETT
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHh-CCCeEEEEEEECC
Confidence 3589999999999999999999999999999999754 55555553 5788999998863
No 182
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.74 E-value=3.4e-08 Score=66.22 Aligned_cols=59 Identities=22% Similarity=0.300 Sum_probs=46.4
Q ss_pred CEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 114 GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 114 ~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
|++|....|+++|+++||++||+|++|||..+.++............++.+.|++.|+.
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECC
Confidence 56677777777889999999999999999999988765433222357889999998864
No 183
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.72 E-value=2e-07 Score=77.32 Aligned_cols=58 Identities=24% Similarity=0.276 Sum_probs=51.5
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
.+++|..|.++++|+++||+.||+|++|||..+.+ .++...+++..++.+.|+|.|+.
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g 420 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNS--IAEMRKVLAAKPAIIALQIVRGN 420 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHhCCCeEEEEEEECC
Confidence 58999999999999999999999999999999975 57777888777779999999874
No 184
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.72 E-value=5.2e-08 Score=77.71 Aligned_cols=57 Identities=16% Similarity=0.288 Sum_probs=48.7
Q ss_pred CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEE
Q psy7774 112 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHS 170 (173)
Q Consensus 112 ~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r 170 (173)
..+++|..|.+++||+++||+.||+|++|||..+.++ .+....+. ..|+.+.|+|.|
T Consensus 241 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R 299 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQD 299 (324)
T ss_dssp SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEE
Confidence 4589999999999999999999999999999999865 44444553 578999999998
No 185
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.69 E-value=1.8e-08 Score=65.55 Aligned_cols=57 Identities=23% Similarity=0.318 Sum_probs=46.7
Q ss_pred CEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh-CCCCeEEEEEEECC
Q psy7774 114 GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA-KPADKVTVLAHSDT 172 (173)
Q Consensus 114 ~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~-~~g~~v~l~v~r~~ 172 (173)
.++|..|.++++|+++||+.||+|++|||..+.++ .+....+. ..+..+.|++.|+.
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQW--VTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCH--HHHHHHHHHCTTCCEEEEEEETT
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCH--HHHHHHHhcCCCCeEEEEEEECC
Confidence 35688999999999999999999999999999754 55555554 56889999998863
No 186
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.67 E-value=6.3e-08 Score=77.09 Aligned_cols=58 Identities=24% Similarity=0.365 Sum_probs=50.1
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
.+++|..|.+++||+++||+.||+|++|||..+.++ .+....+. ..|+.+.|++.|+.
T Consensus 244 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 303 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA--LETMDQVAEIRPGSVIPVVVMRDD 303 (318)
T ss_dssp CCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCH--HHHHHHHHTSCTTCEEEEEEESSS
T ss_pred CcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence 589999999999999999999999999999999764 45555564 57899999999864
No 187
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.67 E-value=2.7e-08 Score=81.77 Aligned_cols=69 Identities=17% Similarity=0.193 Sum_probs=56.3
Q ss_pred CCcccEEEEccCC--C--CEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEEC
Q psy7774 100 CSNLGISLVGGNA--V--GIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSD 171 (173)
Q Consensus 100 ~~~lG~~l~gg~~--~--~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~ 171 (173)
+.||||.+..... . .++|..|.+||||+++||+.||+|++|||..+.++. ...+++..+..|.|++.|.
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~ 145 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKE 145 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeC
Confidence 4688888765432 2 378999999999999999999999999999998875 4455556788999999885
No 188
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.65 E-value=5.5e-08 Score=67.39 Aligned_cols=57 Identities=19% Similarity=0.224 Sum_probs=47.6
Q ss_pred CCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEEC
Q psy7774 111 NAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSD 171 (173)
Q Consensus 111 ~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~ 171 (173)
...+++|..|.++++|+++ |+.||+|++|||..+.++ .+....+. ..++.+.|++ |+
T Consensus 23 ~~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~ 81 (125)
T 2hga_A 23 QPDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQ 81 (125)
T ss_dssp CCCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TT
T ss_pred CCCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-EC
Confidence 3568999999999999999 999999999999999765 45555554 4688999998 65
No 189
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.63 E-value=4.8e-08 Score=78.75 Aligned_cols=58 Identities=31% Similarity=0.419 Sum_probs=49.8
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
.|++|..|.+++||+++||+.||+|++|||..+.++ .+....+. ..|+++.|+|.|+.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g 322 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNG 322 (345)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCH--HHHHHHHHTSCTTCEEEEEEEETT
T ss_pred ceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECC
Confidence 588999999999999999999999999999999854 44545554 57999999999974
No 190
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.58 E-value=1.2e-07 Score=78.73 Aligned_cols=60 Identities=27% Similarity=0.360 Sum_probs=51.0
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
.|++|..|.++|||+++||+.||+|++|||..+.++.+..........|+.+.|+|.|+.
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g 322 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNG 322 (436)
T ss_pred cceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 589999999999999999999999999999999877655444333467899999999864
No 191
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.55 E-value=1.2e-07 Score=79.06 Aligned_cols=60 Identities=28% Similarity=0.395 Sum_probs=50.7
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
.|++|..|.+++||+++||+.||+|++|||..+.++.+..........|+.+.|+|.|+.
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g 341 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDN 341 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETT
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 689999999999999999999999999999999876544443333467899999999864
No 192
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.52 E-value=2.3e-07 Score=79.81 Aligned_cols=68 Identities=26% Similarity=0.385 Sum_probs=54.9
Q ss_pred CcccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 101 SNLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 101 ~~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
..||+.+... ..+++|..|.++|||+++||++||+|++|||..+.... ...+++ +.|+.|.|+|.|+.
T Consensus 485 ~~lG~~~~~~-~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~~~~---l~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 485 VNFGAKYKAS-PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATEQS---VKRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp CCCSEEEEEE-TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCTTT---HHHHHTTCCTTCEEEEEEEETT
T ss_pred cccceEEecc-CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECCHHH---HHHHHHhcCCCCEEEEEEEECC
Confidence 5789987643 34799999999999999999999999999999995333 333443 57899999999974
No 193
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.52 E-value=1.3e-07 Score=76.26 Aligned_cols=58 Identities=29% Similarity=0.349 Sum_probs=49.8
Q ss_pred CCEEEEEecCCCcccccCCCC-----------CCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRT-----------GDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~-----------gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
.|++|..|.+++||+++||+. ||+|++|||..+.++. +....+. +.|+++.|+|.|+.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~--dl~~~l~~~~~g~~v~l~v~R~g 321 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGS--DLYRILDQCKVGDEVTVEVLRGD 321 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSH--HHHHHHTTCCTTCEEEEEEECSS
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHH--HHHHHHHhCCCcCEEEEEEEECC
Confidence 489999999999999999999 9999999999998764 4445553 56899999999874
No 194
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.41 E-value=7.7e-07 Score=71.02 Aligned_cols=57 Identities=28% Similarity=0.385 Sum_probs=49.0
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
.|++|..|.+++||+++||+.||+|++|||..+.+ ..+....++. ++.+.|++.|+.
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~v~l~v~R~g 312 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGR 312 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHHTT-CSSEEEEEEETT
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCC--HHHHHHHHhC-CCeEEEEEEECC
Confidence 58999999999999999999999999999999975 4555556654 689999999864
No 195
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.41 E-value=4.2e-07 Score=75.74 Aligned_cols=58 Identities=21% Similarity=0.320 Sum_probs=51.8
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
.|++|..|.++++|+++||+.||+|++|||..+.+ .++...+++..+..+.|+|.|+.
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~--~~~~~~~l~~~~~~v~l~v~R~g 443 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTD--VKSLQTIAQEKKKELLVQVLRGP 443 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS--HHHHHHHTTSSCSCEEEEEEETT
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHhcCCCeEEEEEEECC
Confidence 47899999999999999999999999999999975 47777788888889999999864
No 196
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.13 E-value=5.1e-07 Score=75.14 Aligned_cols=58 Identities=24% Similarity=0.325 Sum_probs=49.2
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHh--CCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELA--KPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~--~~g~~v~l~v~r~~ 172 (173)
.+++|..|.++++|+++||+.||+|++|||..+.++. +....+. ..|+.+.|+|.|+.
T Consensus 286 ~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g 345 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFA--ALRAQVGTMPVGSKLTLGLLRDG 345 (448)
T ss_dssp CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSH--HHHHHTTSSBTTCCCEEEEESSS
T ss_pred CceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEEEECC
Confidence 4899999999999999999999999999999998874 4444554 47899999998863
No 197
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.10 E-value=3.8e-07 Score=72.97 Aligned_cols=57 Identities=18% Similarity=0.372 Sum_probs=0.0
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
.|++|..|.+++||+++||+.||+|++|||..+.++. +....++. ++.+.|+|.|+.
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~--~~~~~l~~-~~~v~l~v~R~g 310 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSAN--DVSDVIKR-ESTLNMVVRRGN 310 (332)
T ss_dssp ------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHH--HHHHHHhC-CCeEEEEEEECC
Confidence 4789999999999999999999999999999997543 34344443 778888888863
No 198
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.10 E-value=9.6e-06 Score=73.30 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=56.9
Q ss_pred CCcccEEEEccCCCCEEEEEecCC--------CcccccC--CCCCCEEEEECCEecCCCCHHHHHHHHh-CCCCeEEEEE
Q psy7774 100 CSNLGISLVGGNAVGIYVHSVQSG--------SLGYSAG--LRTGDRILEYNGTDLRAATAEEAAYELA-KPADKVTVLA 168 (173)
Q Consensus 100 ~~~lG~~l~gg~~~~i~V~~v~~g--------s~A~~~g--L~~gD~Il~Vng~~~~~~~~~~~~~~l~-~~g~~v~l~v 168 (173)
..++|+.+.- ...+++|..|.+| +||+++| |+ ||+|++|||..+.++. ++..+++ ..|..|.|+|
T Consensus 736 ~~g~G~~~~~-~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v~l~v 811 (1045)
T 1k32_A 736 SGRIACDFKL-DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSARIRL 811 (1045)
T ss_dssp CCBCSEEEEE-ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEEEEEE
T ss_pred cceecEEEEE-eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEEEEEE
Confidence 4588888754 2457999999998 9999999 99 9999999999998876 4555665 6788999999
Q ss_pred EECC
Q psy7774 169 HSDT 172 (173)
Q Consensus 169 ~r~~ 172 (173)
.|..
T Consensus 812 ~r~~ 815 (1045)
T 1k32_A 812 SGKG 815 (1045)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 8863
No 199
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.05 E-value=5.4e-07 Score=75.01 Aligned_cols=68 Identities=19% Similarity=0.302 Sum_probs=0.0
Q ss_pred ccEEEEcc-CCCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCCeEEEEEEECC
Q psy7774 103 LGISLVGG-NAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 103 lG~~l~gg-~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
+|+.+..- ...+++|..|.++++|+++||+.||+|++|||..+.+ ..+...+++.....+.|+|.|+.
T Consensus 372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~--~~~l~~~l~~~~~~v~l~v~R~g 440 (448)
T 1ky9_A 372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKN--IAELRKVLDSKPSVLALNIQRGD 440 (448)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cceEeeccCCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCC--HHHHHHHHHcCCCeEEEEEEECC
Confidence 35554311 1357899999999999999999999999999999975 45566667655558888888863
No 200
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.01 E-value=1.3e-05 Score=68.12 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=47.7
Q ss_pred CCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCH----------HHHHHHHhCCCCeEEEEEEECC
Q psy7774 113 VGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATA----------EEAAYELAKPADKVTVLAHSDT 172 (173)
Q Consensus 113 ~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~----------~~~~~~l~~~g~~v~l~v~r~~ 172 (173)
.|++|..|.++|||+++ |+.||.|++|||..+..... .......+.+|++|.|+|.|+.
T Consensus 277 ~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~G 345 (539)
T 4fln_A 277 EGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAG 345 (539)
T ss_dssp BCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETT
T ss_pred CceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECC
Confidence 58999999999999876 99999999999999965432 1222234678999999999974
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.60 E-value=0.0038 Score=53.00 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=44.2
Q ss_pred CCCEEEEEecCCCcccccCCCCCCEEEEECCEecCCCCHHHHHHHHhCC-CCeEEEEE
Q psy7774 112 AVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLRAATAEEAAYELAKP-ADKVTVLA 168 (173)
Q Consensus 112 ~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~-g~~v~l~v 168 (173)
..+++|+.|.++++|...|++.||+|++|||+.+.++.+ ...+++++ +..+.|.+
T Consensus 414 ~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~--l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 414 EQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHH--LAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp CCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHH--HHHHHHTCCSSEEEEEE
T ss_pred ceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHH--HHHHHHHcCCCeEEEEE
Confidence 358999999999999999999999999999999987654 45566654 45556554
No 202
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=96.26 E-value=0.0055 Score=38.82 Aligned_cols=26 Identities=15% Similarity=0.198 Sum_probs=23.4
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEe
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQY 26 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r 26 (173)
+.+++|+||+++||+++..|+|+|..
T Consensus 55 v~~~~~~evv~llr~~g~~V~L~v~p 80 (82)
T 1r6j_A 55 VIGLKDSQIADILSTSGTVVTITIMP 80 (82)
T ss_dssp CTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred cCCCCHHHHHHHHhcCCCEEEEEEEe
Confidence 46789999999999999999999864
No 203
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=96.23 E-value=0.0062 Score=41.00 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=26.0
Q ss_pred CCcccHHHHHHHHhhC--CCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQC--GNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~--g~~v~L~V~r~~~~ 30 (173)
+++++|+||+++|+++ |+.|+|+|.|+...
T Consensus 64 v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 64 VQNLTHLQVVEVLKQFPVGADVPLLILRGGPP 95 (113)
T ss_dssp CTTSCHHHHHHHHHHSCTTCEEEEEEEESSCC
T ss_pred CCCCCHHHHHHHHHcCCCCCEEEEEEEECCcc
Confidence 4688999999999996 78999999997653
No 204
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=94.16 E-value=0.17 Score=38.89 Aligned_cols=30 Identities=27% Similarity=0.429 Sum_probs=26.7
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|++++.+|+.+++.|+|+|.|..+.
T Consensus 136 v~~~t~~e~v~~l~~~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 136 LSSATHDEAVQALKKTGKEVVLEVKYMKEV 165 (263)
T ss_dssp CTTSCHHHHHHHHHHCCSCCCEEEECCSSS
T ss_pred CCCcCHHHHHHHHhcCCCeEEEEEEeCccc
Confidence 467899999999999999999999987664
No 205
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=93.64 E-value=0.13 Score=34.17 Aligned_cols=29 Identities=10% Similarity=0.180 Sum_probs=25.6
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+.+|++++.+|+++++.|.|+|.|+...
T Consensus 76 ~~~~~~~~~~~l~~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 76 EHCSLLEATKLLASISEKVRLEILPVPQS 104 (117)
T ss_dssp TSCCHHHHHHHHHSCSSEEEEEECCBTTB
T ss_pred CCCCHHHHHHHHHhCCCeEEEEEEECCCC
Confidence 46899999999999999999999987653
No 206
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=93.42 E-value=0.079 Score=33.41 Aligned_cols=29 Identities=7% Similarity=0.174 Sum_probs=23.9
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+.+|++++++|+++++.|+|+|.+.+..
T Consensus 55 ~~~~~~~~~~~i~~~~~~v~L~v~~~~~~ 83 (88)
T 3e17_A 55 ENMSLTDARKLIEKSRGKLQLVVLRDLEH 83 (88)
T ss_dssp TTCCHHHHHHHHHHTTTEEEEEECCC---
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEeCCCcc
Confidence 56899999999999999999999876554
No 207
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=93.02 E-value=0.16 Score=32.95 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=27.2
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCccC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDKYH 32 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~~~ 32 (173)
+.+++|++++.+++.+++.|.|+|.|+...+.
T Consensus 71 v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~ 102 (106)
T 3axa_A 71 LVGLSQERAAELMTRTSSVVTLEVAKQGAIRR 102 (106)
T ss_dssp CTTCCHHHHHHHHHTCCSEEEEEEECCCSSCC
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEeCCcccc
Confidence 35678999999999999999999999876543
No 208
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=92.87 E-value=0.17 Score=32.39 Aligned_cols=29 Identities=10% Similarity=0.458 Sum_probs=24.7
Q ss_pred CCcccHHHHHHHHhhC--CCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQC--GNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~--g~~v~L~V~r~~~ 29 (173)
+.+++|++++++|+.+ ++.|.|+|.|+..
T Consensus 62 v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 62 VQNLSHTEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp CSSCCHHHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCCCCHHHHHHHHHcCCCCCEEEEEEEECCC
Confidence 3567899999999994 7899999998754
No 209
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=92.87 E-value=0.4 Score=32.32 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=25.0
Q ss_pred CcccHHHHHHHHhhC--CCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQC--GNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~--g~~v~L~V~r~~~~ 30 (173)
.+++|++++++|+.+ ++.|.|+|.|+...
T Consensus 77 ~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 107 (129)
T 2kpk_A 77 LGHTHAQVVKIFQSIPIGASVDLELCRGYPL 107 (129)
T ss_dssp TTSCHHHHHHHHHHSCTTEEEEEEEEECSCC
T ss_pred CCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 567899999999997 78899999987653
No 210
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=92.55 E-value=0.16 Score=32.90 Aligned_cols=30 Identities=23% Similarity=0.278 Sum_probs=24.8
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|++++.+|+++++.|+|+|.+....
T Consensus 68 v~~~~~~~~~~~l~~~~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 68 LRDTKHKEAVTILSQQRGEIEFEVVYVALE 97 (103)
T ss_dssp STTSCHHHHHHHHHHCCSEEEEEEEECC--
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEEecCCc
Confidence 357899999999999999999999876553
No 211
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=92.41 E-value=0.39 Score=32.07 Aligned_cols=29 Identities=10% Similarity=0.094 Sum_probs=24.8
Q ss_pred CcccHHHHHHHHhh--CCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQ--CGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~--~g~~v~L~V~r~~~~ 30 (173)
.+++|++++++|++ .++.|.|+|.|+...
T Consensus 78 ~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 78 LGHTHADVVKLFQSVPIGQSVNLVLCRGYPL 108 (123)
T ss_dssp TTSCHHHHHHHHHTSCTTCEEEEEEEESCCC
T ss_pred CCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 46789999999999 579999999987654
No 212
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=92.33 E-value=0.17 Score=32.84 Aligned_cols=29 Identities=21% Similarity=0.282 Sum_probs=25.6
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+++|++++.+|+.+++.|.|+|.|+.+.
T Consensus 72 ~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 100 (105)
T 1wha_A 72 TEARHDHAVSLLTAASPTIALLLEREAGS 100 (105)
T ss_dssp TTCCHHHHHHHHTSCCSCEEEEEEECCCC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 56789999999999999999999998653
No 213
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=92.06 E-value=0.21 Score=32.57 Aligned_cols=29 Identities=14% Similarity=0.184 Sum_probs=25.5
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
+.+++|++++.+|+++++.|.|+|.|+..
T Consensus 65 v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 93 (106)
T 4amh_A 65 LEEVTHEEAVTALKNTSDFVYLKVAKPGS 93 (106)
T ss_dssp CSSCCHHHHHHHHHSCCSEEEEEEECCSS
T ss_pred CCCCCHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 35689999999999999999999998754
No 214
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=91.64 E-value=0.23 Score=32.12 Aligned_cols=27 Identities=15% Similarity=-0.018 Sum_probs=21.8
Q ss_pred CCcccHHHHHHHHhhC--CCeEEEEEEeC
Q psy7774 1 MRSATYQLAASVLRQC--GNSITMLVQYS 27 (173)
Q Consensus 1 l~~~th~~av~~L~~~--g~~v~L~V~r~ 27 (173)
+.+++|+|++++||++ |..++|++.+.
T Consensus 61 v~g~~h~evv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 61 IVGWRHYDVAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp CTTCCHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred ccCCCHHHHHHHHHhCCCCCEEEEEEECc
Confidence 4678999999999995 56788877653
No 215
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.49 E-value=0.22 Score=31.33 Aligned_cols=28 Identities=18% Similarity=0.366 Sum_probs=24.4
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++.+|+.+++.|.|+|.|++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 64 EGEQHEKAVELLKAAQGSVKLVVRSGPS 91 (93)
T ss_dssp TTSCHHHHHHHHHHCCSEEEEEECCCCS
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEEeCCC
Confidence 4678999999999999999999998764
No 216
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=91.47 E-value=0.23 Score=30.54 Aligned_cols=28 Identities=11% Similarity=0.334 Sum_probs=24.1
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSP 28 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~ 28 (173)
+.+.+|++++.+|+.+++.|.|+|.|++
T Consensus 55 v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 55 VKKASHEDVVKLIGKCSGVLHMVIAEGV 82 (83)
T ss_dssp CSSCCHHHHHHHHTTCSSCEEEEEECCC
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEEEcCC
Confidence 3567899999999998889999999864
No 217
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=91.36 E-value=0.2 Score=31.68 Aligned_cols=28 Identities=14% Similarity=0.120 Sum_probs=23.5
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+.+|++++++|+.+++.|+|+|.+...
T Consensus 62 ~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 62 EDKRPEEIIQILAQSQGAITFKIIPGSK 89 (93)
T ss_dssp TTSCHHHHHHHHHHCCEEEEEEEECC--
T ss_pred CCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 5689999999999999999999987544
No 218
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=91.32 E-value=0.3 Score=30.50 Aligned_cols=29 Identities=7% Similarity=0.063 Sum_probs=25.0
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
+.+.+|++++++|+.+++.|.|+|.|...
T Consensus 60 v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 60 VEGLRHAEVVASIKAREDEARLLVVGPST 88 (90)
T ss_dssp CTTSCHHHHHHHHTTSSSEEEEEEECCCC
T ss_pred CCCCCHHHHHHHHHcCCCcEEEEEEccCC
Confidence 35678999999999999999999998654
No 219
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=91.20 E-value=0.31 Score=31.28 Aligned_cols=30 Identities=13% Similarity=0.255 Sum_probs=25.9
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|++++.+++.+++.|.|+|.|+...
T Consensus 67 v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 67 VSEVVHSRAVEALKEAGPVVRLVVRRRQPP 96 (102)
T ss_dssp CSSCCHHHHHHHHHHSCSEEEEEEEEECCC
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Confidence 356889999999999999999999987653
No 220
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.09 E-value=0.27 Score=31.38 Aligned_cols=27 Identities=19% Similarity=0.386 Sum_probs=24.6
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSP 28 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~ 28 (173)
.+++|++++.+++.+++.|.|+|.|+.
T Consensus 63 ~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 63 EDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp TTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 567899999999999999999999976
No 221
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=90.99 E-value=0.26 Score=32.19 Aligned_cols=29 Identities=45% Similarity=0.699 Sum_probs=25.2
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+++|++++.+|+.+++.|.|+|.|+...
T Consensus 72 ~~~~~~~~~~~l~~~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 72 QGMTSEQVAQVLRNCGNSVRMLVARDPAG 100 (111)
T ss_dssp TTSCHHHHHHHHHHHCSEEEEEEEESCTT
T ss_pred CCCCHHHHHHHHHhCCCeEEEEEEeCCCC
Confidence 46789999999999999999999987653
No 222
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=90.83 E-value=0.61 Score=30.56 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=26.6
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCccC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDKYH 32 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~~~ 32 (173)
+.+++|++++.+|+.+++.|.|+|.|+...+.
T Consensus 76 v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~~~ 107 (116)
T 2dm8_A 76 LRNSSHEEAITALRQTPQKVRLVVYRDEAHYR 107 (116)
T ss_dssp CSSSCHHHHHHHHHTCCSEEEEEEECCSSCCC
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEEEeCCcccc
Confidence 35678999999999999999999998766543
No 223
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=90.77 E-value=0.23 Score=32.43 Aligned_cols=29 Identities=24% Similarity=0.231 Sum_probs=24.0
Q ss_pred CCcccHHHHHHHHhhC---CCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQC---GNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~---g~~v~L~V~r~~~ 29 (173)
+.+++|++++++|+++ +..|.|+|.|...
T Consensus 66 v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 66 FENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp TTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 4578899999999997 5579999998644
No 224
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=90.60 E-value=0.36 Score=31.21 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=25.6
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|++++.+++++++.|.|+|.|+...
T Consensus 66 v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 66 LEEVTHEEAVTALKNTSDFVYLKVAKPTSM 95 (105)
T ss_dssp CTTCBHHHHHHHHHSCCSEEEEEEECCCC-
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEcCCCC
Confidence 356889999999999999999999987664
No 225
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=90.53 E-value=0.55 Score=30.52 Aligned_cols=31 Identities=19% Similarity=0.381 Sum_probs=25.8
Q ss_pred CcccHHHHHHHHhhC--CCeEEEEEEeCCCccC
Q psy7774 2 RSATYQLAASVLRQC--GNSITMLVQYSPDKYH 32 (173)
Q Consensus 2 ~~~th~~av~~L~~~--g~~v~L~V~r~~~~~~ 32 (173)
.+.+|++++++|+.+ ++.|.|+|.|+...+.
T Consensus 73 ~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~ 105 (111)
T 2koj_A 73 AGKSQEEVVSLLRSTKMEGTVSLLVFRQEEAFH 105 (111)
T ss_dssp TTSCHHHHHHHHHHCCCSSEEEEEEEECCCCCC
T ss_pred CCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCcc
Confidence 467899999999985 8899999998776544
No 226
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=90.47 E-value=0.35 Score=30.67 Aligned_cols=28 Identities=32% Similarity=0.595 Sum_probs=24.8
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.++++++++.+|+.+++.|.|+|.|+..
T Consensus 66 ~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 66 LGTTHAEAMSILKQCGQEAALLIEYDVS 93 (97)
T ss_dssp SSCCHHHHHHHHHHSCSEEEEEEEEECC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 4678999999999999999999998765
No 227
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=90.46 E-value=0.44 Score=30.06 Aligned_cols=29 Identities=17% Similarity=0.395 Sum_probs=25.2
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
+.+++|.+++.+++.+++.|.|+|.|+..
T Consensus 62 v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 62 LKYGTPELAAQIIQASGERVNLTIARPGK 90 (95)
T ss_dssp CTTCCHHHHHHHHHHCCSEEEEEEEEESC
T ss_pred CCCCCHHHHHHHHHcCCCEEEEEEEcCCc
Confidence 35678999999999999999999998655
No 228
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=90.41 E-value=0.32 Score=32.15 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=25.8
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|++++.+|+++++.|.|+|.|....
T Consensus 77 v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 77 MEDVLHSFAVQQLRKSGKIAAIVVKRPRKV 106 (117)
T ss_dssp CBTCCHHHHHHHHHHSCSEEEEEEEEEEEC
T ss_pred CCCcCHHHHHHHHhcCCCeEEEEEEECCcc
Confidence 357889999999999999999999986553
No 229
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=90.33 E-value=0.52 Score=31.03 Aligned_cols=33 Identities=39% Similarity=0.472 Sum_probs=27.5
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCccCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDKYHE 33 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~~~~ 33 (173)
+.++++.+++.+++..++.|.|+|.|+...+..
T Consensus 74 v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~ 106 (117)
T 1uit_A 74 LRSATEQQARLIIGQQCDTITILAQYNPHVHQL 106 (117)
T ss_dssp TTTCCHHHHHHHTTSCCSEEEEEECCCSCCCCC
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEECCchhhh
Confidence 356788999988888999999999998887653
No 230
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=90.29 E-value=0.51 Score=29.92 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=25.6
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|++++.+++.+++.|.|+|.|+...
T Consensus 63 v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 92 (98)
T 2opg_A 63 LRKATHDEAINVLRQTPQRVRLTLYRDEAP 92 (98)
T ss_dssp CTTCCHHHHHHHHHTCCSEEEEEEEECSSC
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEEEcCCCC
Confidence 356789999999999999999999987654
No 231
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=90.21 E-value=0.43 Score=29.86 Aligned_cols=28 Identities=25% Similarity=0.256 Sum_probs=24.5
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++.+++.+++.|.|+|.|...
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 63 RNATQEAVAALLKCSLGTVTLEVGRIST 90 (92)
T ss_dssp TTCCHHHHHHHHHHCCSEEEEEEECCCC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEcccc
Confidence 5678999999999999999999998753
No 232
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=89.87 E-value=0.46 Score=30.21 Aligned_cols=28 Identities=14% Similarity=0.114 Sum_probs=24.7
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++.+|+.+++.|.|+|.|+..
T Consensus 67 ~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 67 LGLVHMDVVELLLKSGNKISLRTTALEN 94 (99)
T ss_dssp TTCCHHHHHHHHHHSCSEEEEEEECSCS
T ss_pred CCCCHHHHHHHHhcCCCEEEEEEEECCC
Confidence 4678999999999999999999998654
No 233
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=89.75 E-value=0.25 Score=31.78 Aligned_cols=31 Identities=35% Similarity=0.730 Sum_probs=26.8
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCccC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDKYH 32 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~~~ 32 (173)
.+.++.+++.+++.+++.|.|+|.|+++.|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~ 99 (104)
T 3i4w_A 69 RNASHEQAAIALKNAGQTVTIIAQYKPEEYS 99 (104)
T ss_dssp TTCCHHHHHHHHHTSCSEEEEEEEECHHHHH
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEECcchhh
Confidence 5688999999999999999999999876543
No 234
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=89.75 E-value=0.48 Score=30.06 Aligned_cols=28 Identities=18% Similarity=0.373 Sum_probs=24.3
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+.+|++++.+|+.+++.|.|+|.|+..
T Consensus 64 ~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 64 KGKPLSEAIHLLQMAGETVTLKIKKQTD 91 (97)
T ss_dssp TTCCHHHHHHHHHTCCSEEEEEEECCCC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 4568999999999889999999998654
No 235
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=89.68 E-value=0.38 Score=31.49 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=26.0
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|.+++.+++.+++.|.|+|.|+...
T Consensus 68 v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 68 LVGVTQSFAASVLRNTKGRVRFMIGRERPG 97 (113)
T ss_dssp CSSCCHHHHHHHHHHSCSSCEEEEEECCCC
T ss_pred CCCCCHHHHHHHHhcCCCeEEEEEEeCCCC
Confidence 356789999999999999999999987654
No 236
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=89.66 E-value=0.33 Score=30.40 Aligned_cols=28 Identities=25% Similarity=0.196 Sum_probs=23.3
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++++|+.+.+.|+|+|.|...
T Consensus 59 ~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 86 (88)
T 1kwa_A 59 ANQTVEQLQKMLREMRGSITFKIVPSYR 86 (88)
T ss_dssp GGSCHHHHHHHHHHCCEEEEEEEECCCC
T ss_pred CCCCHHHHHHHHhcCCCcEEEEEECCcC
Confidence 3578999999999987799999987543
No 237
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=89.65 E-value=0.38 Score=30.80 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=25.4
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|++++.+|+.+++.|.|+|.|+...
T Consensus 69 v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 69 TRDMTHARAIELIKSGGRRVRLLLKRGTGS 98 (103)
T ss_dssp CSSCCHHHHHHHHHHHCSEECEEEECTTCS
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 356789999999999999999999987553
No 238
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.53 E-value=0.44 Score=31.58 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=26.0
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
+.+++|++++.+|+.+++.|.|+|.|+...
T Consensus 80 v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 80 LKNLLHQDAVDLFRNAGYAVSLRVQHRLQV 109 (120)
T ss_dssp CCSCCHHHHHHHHHHHCSEEEEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEeCCcC
Confidence 457889999999999999999999987653
No 239
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=89.34 E-value=0.54 Score=29.45 Aligned_cols=29 Identities=21% Similarity=0.190 Sum_probs=23.7
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+++|++++++|+.+++.|.|+|.|....
T Consensus 57 ~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 85 (91)
T 2f5y_A 57 EHWKCVELAHEIRSCPSEIILLVWRMVPQ 85 (91)
T ss_dssp TTCCHHHHHHHHHTCSSEEEEEEEECC--
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCCC
Confidence 45689999999999999999999987553
No 240
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=88.94 E-value=0.16 Score=33.21 Aligned_cols=33 Identities=39% Similarity=0.760 Sum_probs=27.8
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCccCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDKYHE 33 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~~~~ 33 (173)
+.+++|++++.+++..++.|.|+|.|++..|..
T Consensus 72 v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~~ 104 (113)
T 1um7_A 72 LRNATHEQAAAALKRAGQSVTIVAQYRPEEYSR 104 (113)
T ss_dssp CTTCCHHHHHHHHHSCCSEEEEEEECCHHHHHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEEECcchhhh
Confidence 356789999999999999999999988776543
No 241
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=88.77 E-value=0.64 Score=28.77 Aligned_cols=27 Identities=22% Similarity=0.318 Sum_probs=23.7
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSP 28 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~ 28 (173)
.+.+|++++++++.+++.|.|+|.|+.
T Consensus 60 ~~~~~~~~~~~~~~~g~~v~l~v~R~g 86 (88)
T 2uzc_A 60 QGMTHLEAQNKIKGCTGSLNMTLQRES 86 (88)
T ss_dssp TTCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred CCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 567899999999999999999998864
No 242
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=88.66 E-value=0.33 Score=31.28 Aligned_cols=28 Identities=7% Similarity=0.138 Sum_probs=24.3
Q ss_pred CcccHHHHHHHHhhC--CCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQC--GNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~--g~~v~L~V~r~~~ 29 (173)
.+++|++++++|+.+ ++.|.|+|.|+..
T Consensus 68 ~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 68 AGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp TTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 467899999999997 8999999998754
No 243
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=88.57 E-value=0.64 Score=29.50 Aligned_cols=29 Identities=10% Similarity=0.298 Sum_probs=24.7
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
+.+++|++++.+++.+++.|.|+|.|...
T Consensus 64 v~~~~~~~~~~~~~~~~~~v~l~v~R~~p 92 (96)
T 2qkv_A 64 LEGLPFQVSYALFKGANGKVSMEVTRPKP 92 (96)
T ss_dssp CTTCCHHHHHHHHHTCSSEEEEEEECCCC
T ss_pred CCCCCHHHHHHHHhcCCCcEEEEEEeCCc
Confidence 35678999999999999999999998543
No 244
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=88.45 E-value=0.56 Score=31.33 Aligned_cols=27 Identities=11% Similarity=0.124 Sum_probs=23.7
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSP 28 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~ 28 (173)
.+++|++++.+|+++++.|+|+|.|..
T Consensus 79 ~~~~~~~~~~~l~~~~~~v~l~v~r~~ 105 (125)
T 3hpk_A 79 KGKTKVEVAKMIQEVKGEVTIHYNKLQ 105 (125)
T ss_dssp TTCCHHHHHHHHHHSCSEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 467899999999999999999998743
No 245
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=88.41 E-value=0.59 Score=28.68 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=23.4
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSP 28 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~ 28 (173)
.+++|++++.+++.+++.|.|+|.|+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~v~l~v~R~~ 84 (85)
T 1rgw_A 58 DTMTHLEAQNKIKSASYNLSLTLQKSK 84 (85)
T ss_dssp TTCCHHHHHHHHTTCSSCEEEEEESCC
T ss_pred CCcCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 567899999999999889999998753
No 246
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=88.21 E-value=0.5 Score=29.38 Aligned_cols=28 Identities=21% Similarity=0.293 Sum_probs=24.0
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++.+++.+++.|.|+|.|+..
T Consensus 60 ~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 60 GSLTHIEAQNKIRACGERLSLGLSRAIT 87 (89)
T ss_dssp GGCCHHHHHHHHHTCTTEEEEEEEEECC
T ss_pred CCCCHHHHHHHHHhCCCEEEEEEEeCCC
Confidence 4568999999999999999999988643
No 247
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=88.07 E-value=0.55 Score=30.78 Aligned_cols=28 Identities=11% Similarity=0.146 Sum_probs=24.6
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++++|+..++.|.|+|.|+..
T Consensus 77 ~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 77 INMPHADIVKLIKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp TTSCHHHHHHHHHHTTTEEEEEECCCSC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 4677999999999999999999998755
No 248
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=88.06 E-value=0.53 Score=31.59 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=25.2
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+++|++++++|+.+++.|.|+|.|+...
T Consensus 80 ~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 80 QGFANHDVVEVLRNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp TTCCHHHHHHHHHHCCSSEEEEEEEESSS
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 56789999999999999999999987653
No 249
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=87.89 E-value=0.64 Score=29.03 Aligned_cols=28 Identities=18% Similarity=0.311 Sum_probs=22.6
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.++++++++++|+.+++.|.|+|.|+..
T Consensus 60 ~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 60 LDEPYEKVVDRIQSSGKNVTLLVCGKKA 87 (91)
T ss_dssp TTSCHHHHHHHHTTSCSEEEEEEEC---
T ss_pred CCCCHHHHHHHHHcCCCEEEEEEEeCCc
Confidence 3568999999999999999999998654
No 250
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=87.81 E-value=0.77 Score=28.93 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=24.4
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++++|+..++.|.|+|.|+..
T Consensus 63 ~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 90 (96)
T 2v90_A 63 EGLGHEETVSRIQGQGSCVSLTVVDPEA 90 (96)
T ss_dssp TTCCHHHHHHHHHTTTTEEEEEEECCCT
T ss_pred CCCCHHHHHHHHHcCCCEEEEEEECCCC
Confidence 4567999999999999999999998755
No 251
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=87.48 E-value=0.77 Score=29.77 Aligned_cols=29 Identities=24% Similarity=0.320 Sum_probs=25.4
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+++|++++.+++.+++.|.|+|.|+...
T Consensus 70 ~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 98 (110)
T 1um1_A 70 LGLGYLRAVDLIRHGGKKMRFLVAKSDVE 98 (110)
T ss_dssp SSCCHHHHHHHHHTCCSEEEEEEECCCHH
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCcc
Confidence 46789999999999999999999987653
No 252
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=87.24 E-value=0.89 Score=28.48 Aligned_cols=29 Identities=17% Similarity=0.203 Sum_probs=23.9
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
+.+++|++++++|+.+++.+.+++.|...
T Consensus 61 v~~~~~~~~~~~l~~~~~~~~~~~~r~~~ 89 (95)
T 3r68_A 61 VEALDHDGVVEMIRKGGDQTTLLVLDKEL 89 (95)
T ss_dssp CTTCCHHHHHHHHHTTTTEEEEEEEECC-
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEEECCcc
Confidence 35678999999999999999998876544
No 253
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=87.04 E-value=0.79 Score=29.81 Aligned_cols=29 Identities=10% Similarity=0.291 Sum_probs=24.9
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
+.+++|++++.+++.+++.|.|+|.|...
T Consensus 58 v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 86 (106)
T 2la8_A 58 LEGLPFQVCYALFKGANGKVSMEVTRPKP 86 (106)
T ss_dssp CSSSCHHHHHHHHHSCBSCEEEEEEECCS
T ss_pred CCCCCHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 35678999999999999999999998644
No 254
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=86.73 E-value=1.2 Score=29.29 Aligned_cols=30 Identities=20% Similarity=0.251 Sum_probs=22.5
Q ss_pred CCcccHHHHHHHHhhCCCeEE-EEEEeCCCc
Q psy7774 1 MRSATYQLAASVLRQCGNSIT-MLVQYSPDK 30 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~-L~V~r~~~~ 30 (173)
+.+++|++++.+|+.+++.+. |+|.|+...
T Consensus 75 v~~~~~~~~~~~l~~~~~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 75 LKGTTHHDALAILRQAREPRQAVIVTRKLTP 105 (119)
T ss_dssp CSSCCHHHHHHHHHHTTSSSEEEEEEECCCS
T ss_pred CCCCCHHHHHHHHHhCCCCeEEEEEEcCCCc
Confidence 356789999999999876654 677776554
No 255
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=86.06 E-value=1 Score=27.72 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=23.5
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSP 28 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~ 28 (173)
.+++|++++++|+.+++.|.|.|.|+.
T Consensus 59 ~~~~~~~~~~~l~~~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 59 EGMLHAEAQSKIRQSPSPLRLQLDRIT 85 (87)
T ss_dssp TTCCHHHHHHHHHTCCSSEEEEEEECC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEecC
Confidence 456799999999998899999999874
No 256
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=85.36 E-value=1.1 Score=28.12 Aligned_cols=28 Identities=18% Similarity=0.196 Sum_probs=24.4
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++.+|+..++.|.|+|.|+..
T Consensus 63 ~~~~~~~~~~~l~~~~~~v~l~v~R~g~ 90 (94)
T 1vb7_A 63 ENMLHAEAQSKIRQSASPLRLQLDRSSG 90 (94)
T ss_dssp TTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEEECCc
Confidence 4678999999999988999999998754
No 257
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=85.33 E-value=1.3 Score=27.53 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=24.6
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+.+|.+++.+|+.+++.|.|.|.|+..
T Consensus 60 ~~~~~~~~~~~l~~~g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 60 SNMTHLEAQNRIKGCTDNLTLTVARSEH 87 (91)
T ss_dssp TTCCHHHHHHHHHTCSSEEEEEEEEECC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 5678999999999999999999998754
No 258
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=85.21 E-value=1 Score=28.88 Aligned_cols=28 Identities=25% Similarity=0.361 Sum_probs=24.7
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+.+|++++.+|+++++.|.|+|.|+..
T Consensus 59 ~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 86 (106)
T 3ngh_A 59 DKEEHAQVVELVRKSGNSVTLLVLDGDS 86 (106)
T ss_dssp TTSCHHHHHHHHHHTTTEEEEEEECHHH
T ss_pred CCCCHHHHHHHHHhCCCEEEEEEEECCe
Confidence 5678999999999999999999998655
No 259
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=84.49 E-value=1.6 Score=28.85 Aligned_cols=29 Identities=17% Similarity=0.430 Sum_probs=24.3
Q ss_pred CcccHHHHHHHHhhC--CCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQC--GNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~--g~~v~L~V~r~~~~ 30 (173)
.++++++++++|+.. ++.|.|+|.|+...
T Consensus 79 ~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 79 EDSTFEEANQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SSSCHHHHHHHHHHHTTTTCEEEEEEEECCC
T ss_pred CCCCHHHHHHHHHhCCCCCeEEEEEEECCcc
Confidence 457799999999986 78999999987653
No 260
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=84.45 E-value=1.4 Score=27.23 Aligned_cols=27 Identities=26% Similarity=0.356 Sum_probs=22.6
Q ss_pred CcccHHHHHHHHhh--CCCeEEEEEEeCC
Q psy7774 2 RSATYQLAASVLRQ--CGNSITMLVQYSP 28 (173)
Q Consensus 2 ~~~th~~av~~L~~--~g~~v~L~V~r~~ 28 (173)
.+.+|++++++|++ .++.|.|+|.|+.
T Consensus 58 ~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 58 QALTHNQVVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp TTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHhCCCCCEEEEEEEeCC
Confidence 46779999999986 5889999998864
No 261
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=84.35 E-value=0.96 Score=29.58 Aligned_cols=28 Identities=25% Similarity=0.361 Sum_probs=24.6
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+.+|++++++|+..++.|.|+|.|+..
T Consensus 71 ~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 98 (114)
T 2edz_A 71 DKEEHAQVVELVRKSGNSVTLLVLDGDS 98 (114)
T ss_dssp SSSCHHHHHHHHHHTCSEEEEEEECHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEEEEECCc
Confidence 4678999999999999999999998655
No 262
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=84.13 E-value=0.93 Score=29.85 Aligned_cols=29 Identities=10% Similarity=0.142 Sum_probs=24.1
Q ss_pred CCcccHHHHHHHHhhCC----CeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQCG----NSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~g----~~v~L~V~r~~~ 29 (173)
+.+++|++++.+|+.++ ..|.|+|.|+..
T Consensus 75 v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 75 IAEHTHDQVVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp TTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred CCCCCHHHHHHHHHhccccCCCEEEEEEEcccc
Confidence 35679999999999985 489999998754
No 263
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=83.91 E-value=1.4 Score=31.51 Aligned_cols=26 Identities=15% Similarity=0.252 Sum_probs=23.8
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEe
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQY 26 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r 26 (173)
+.+++|++++.+|+.+++.|.|+|.|
T Consensus 55 v~~~~~~~~~~~~~~~~~~v~l~v~r 80 (195)
T 2qbw_A 55 FINIEHGQAVSLLKTFQNTVELIIVR 80 (195)
T ss_dssp CTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 45788999999999999999999998
No 264
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=83.72 E-value=0.91 Score=29.88 Aligned_cols=32 Identities=34% Similarity=0.736 Sum_probs=27.1
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCCccC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPDKYH 32 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~~~~ 32 (173)
+.+++|.+++.+++.+++.|.|+|.|.+..+.
T Consensus 71 v~~~~~~~~~~~~~~~~~~v~l~v~r~~~~~~ 102 (119)
T 1tp5_A 71 LRNASHEQAAIALKNAGQTVTIIAQYKPEEYS 102 (119)
T ss_dssp CTTCCHHHHHHHHHTSCSEEEEEEEECHHHHH
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEEEECCchhc
Confidence 35678999999999999999999998877654
No 265
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=83.52 E-value=1.5 Score=27.96 Aligned_cols=29 Identities=21% Similarity=0.307 Sum_probs=24.8
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+++|.+++.+++.+++.|.|+|.|+...
T Consensus 62 ~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 90 (103)
T 1wf7_A 62 QGMTHLEAQNKIKACTGSLNMTLQRASAA 90 (103)
T ss_dssp SSCCHHHHHHHHHHCSSEEEEEECCCSCC
T ss_pred CCCCHHHHHHHHHcCCCeEEEEEEeCCCc
Confidence 56789999999999999999999887553
No 266
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=83.28 E-value=1.4 Score=28.10 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=23.8
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++++|+.+++.|.|+|.|...
T Consensus 63 ~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 63 EALDHDGVVEMIRKGGDQTTLLVLDKEA 90 (102)
T ss_dssp TTSCHHHHHHHHHHSTTEEEEEECSTTC
T ss_pred CCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 4567899999999999999999987544
No 267
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=83.25 E-value=1.4 Score=28.24 Aligned_cols=29 Identities=10% Similarity=0.142 Sum_probs=25.0
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.++++++++++|+..++.|.|.|.|+...
T Consensus 62 ~~~~~~~~~~~l~~~g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 62 ESMTHADAQDRIKAASYQLCLKIDRAETR 90 (103)
T ss_dssp SSCCHHHHHHHHTTCCSEEECEECCCTTT
T ss_pred CCCCHHHHHHHHHhCCCeEEEEEEECCeE
Confidence 45679999999999999999999987664
No 268
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.95 E-value=1.2 Score=28.65 Aligned_cols=28 Identities=11% Similarity=0.226 Sum_probs=24.2
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|++++.+++.+++.+.|+|.|...
T Consensus 65 ~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 65 EDASHEEVVEKVKKSGSRVMFLLVDKET 92 (106)
T ss_dssp TTCCHHHHHHHHHHHCSEEEEEECCTTT
T ss_pred CCCCHHHHHHHHHhCCCeEEEEEEcCch
Confidence 4678999999999999999999987654
No 269
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=82.58 E-value=1.8 Score=25.95 Aligned_cols=26 Identities=15% Similarity=0.276 Sum_probs=21.7
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYS 27 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~ 27 (173)
.+++++++..+|+..++.|.|.|.|+
T Consensus 55 ~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 55 ENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp TTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred CCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 35689999999999888999999874
No 270
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=82.32 E-value=1.6 Score=29.51 Aligned_cols=25 Identities=12% Similarity=0.125 Sum_probs=22.4
Q ss_pred cccHHHHHHHHhh--CCCeEEEEEEeC
Q psy7774 3 SATYQLAASVLRQ--CGNSITMLVQYS 27 (173)
Q Consensus 3 ~~th~~av~~L~~--~g~~v~L~V~r~ 27 (173)
+.+|++++++|+. .|..|+|+|.|+
T Consensus 84 ~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 84 GYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 4689999999998 588999999997
No 271
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=82.11 E-value=2 Score=26.88 Aligned_cols=27 Identities=7% Similarity=0.166 Sum_probs=22.8
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++|.+++..++ .++.|.|+|.|+..
T Consensus 62 ~~~~~~~~~~~~~-~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 62 TNSSHLEVVKLIK-SGAYVALTLLGSSS 88 (93)
T ss_dssp SSSCHHHHHHHHT-SSSEEEEEEECCCC
T ss_pred CCCCHHHHHHhhc-CCCEEEEEEEECCC
Confidence 5677889999998 59999999998754
No 272
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=81.59 E-value=2.6 Score=26.06 Aligned_cols=26 Identities=27% Similarity=0.256 Sum_probs=21.3
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYS 27 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~ 27 (173)
.+++|++++++|+++++.+.+++.+.
T Consensus 60 ~~~~~~~~~~~l~~~~~~~~~~~~~r 85 (91)
T 1g9o_A 60 EKETHQQVVSRIRAALNAVRLLVVDP 85 (91)
T ss_dssp TTCCHHHHHHHHHTCSSEEEEEEECC
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEEcC
Confidence 56789999999999888888877643
No 273
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=80.21 E-value=2.3 Score=26.28 Aligned_cols=28 Identities=14% Similarity=0.247 Sum_probs=22.2
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
.+++++++..+|+.+++.|.|.|.|+..
T Consensus 57 ~~~~~~~~~~~l~~~~~~v~l~v~r~g~ 84 (92)
T 3cyy_A 57 ENMSLTDAKTLIERSKGKLKMVVQRDER 84 (92)
T ss_dssp TTCCHHHHHHHHHTTTTEEEEEEEC---
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 3568999999999988899999988654
No 274
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.40 E-value=1.9 Score=26.94 Aligned_cols=24 Identities=13% Similarity=0.210 Sum_probs=21.7
Q ss_pred ccHHHHHHHHhhCCCeEEEEEEeC
Q psy7774 4 ATYQLAASVLRQCGNSITMLVQYS 27 (173)
Q Consensus 4 ~th~~av~~L~~~g~~v~L~V~r~ 27 (173)
.++++++++|+..++.|.|+|.|.
T Consensus 64 ~~~~~~~~~l~~~~~~v~l~v~~~ 87 (91)
T 2e7k_A 64 SDPRALQELLRNASGSVILKILSG 87 (91)
T ss_dssp TCHHHHHHHHHTCCSSBCEEEECC
T ss_pred CCHHHHHHHHHcCCCeEEEEEEEC
Confidence 589999999999999999999875
No 275
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=76.11 E-value=3.6 Score=26.23 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=24.6
Q ss_pred CCcccHHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 1 MRSATYQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
+.++++.+++..++++++.|.|+|.|+..
T Consensus 70 v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 70 MDNVEHAFAVQQLRKSGKNAKITIRRKKG 98 (107)
T ss_dssp CTTCCHHHHHHHHHTCCSEEEEEEEEESC
T ss_pred CCCccHHHHHHHhhCCCCEEEEEEEECCC
Confidence 35678999999999999999999998654
No 276
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=75.90 E-value=1.6 Score=36.20 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=26.3
Q ss_pred CCcccHHHHHHHHhh--CCCeEEEEEEeCCCcc
Q psy7774 1 MRSATYQLAASVLRQ--CGNSITMLVQYSPDKY 31 (173)
Q Consensus 1 l~~~th~~av~~L~~--~g~~v~L~V~r~~~~~ 31 (173)
+.+++|++++.+|+. +|+.|+|+|.|+.+.|
T Consensus 55 v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~~~ 87 (468)
T 3shw_A 55 FTNIIREEAVLFLLDLPKGEEVTILAQKKKDVY 87 (468)
T ss_dssp CTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHH
T ss_pred CCCCCHHHHHHHHHhcCCCCEEEEEEEECCccc
Confidence 457899999999999 8999999999876543
No 277
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=74.59 E-value=4.7 Score=26.61 Aligned_cols=29 Identities=14% Similarity=0.351 Sum_probs=24.3
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+.+|+++..+|+..+..|.|+|.|+...
T Consensus 79 ~~~~~~dl~~~l~~~g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 79 RTLRVEEVEDAIKQTSQTLQLLIEHDPVP 107 (118)
T ss_dssp TTSCHHHHHHHHHCCSSCEEEEEEECSSC
T ss_pred CCcCHHHHHHHHHhCCCEEEEEEEECCEE
Confidence 45678999999998888999999987654
No 278
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=69.58 E-value=8.7 Score=32.76 Aligned_cols=41 Identities=22% Similarity=0.379 Sum_probs=26.7
Q ss_pred cccEEEEccCCCCEEEEEecCCCcccccCCCCCCEEEEECCEecC
Q psy7774 102 NLGISLVGGNAVGIYVHSVQSGSLGYSAGLRTGDRILEYNGTDLR 146 (173)
Q Consensus 102 ~lG~~l~gg~~~~i~V~~v~~gs~A~~~gL~~gD~Il~Vng~~~~ 146 (173)
.+||.+.--.+..+||..+.... +++..||+|++|||.++.
T Consensus 85 ~~Pf~vki~iDG~i~V~dv~~~~----s~I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 85 YLPYTVQKSSDGRFYFVDIMTFS----SEIRVGDELLEVDGAPVQ 125 (583)
T ss_dssp ECSEEEEECTTSCEEEEEECSSC----CSSCTTCEEEEETTEEHH
T ss_pred cCCeEEEEEECCcEEEEeccccc----cCCCCCCEEEEECCccHH
Confidence 34554442334457886663222 269999999999998874
No 279
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.38 E-value=3 Score=26.43 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=21.2
Q ss_pred HHHHHHHHhhCCCeEEEEEEeCCC
Q psy7774 6 YQLAASVLRQCGNSITMLVQYSPD 29 (173)
Q Consensus 6 h~~av~~L~~~g~~v~L~V~r~~~ 29 (173)
|++++.+++.+++.|.|+|.|+..
T Consensus 72 ~~~~~~~~~~~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 72 RQEALILIKGSFRILKLIVRRRNS 95 (100)
T ss_dssp SHHHHHHHHTCCSSCEEEEEECCC
T ss_pred HHHHHHHHHhCCCeEEEEEEeCCC
Confidence 688999999999999999999754
No 280
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.39 E-value=9.4 Score=24.97 Aligned_cols=29 Identities=21% Similarity=0.246 Sum_probs=22.8
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCccC
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDKYH 32 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~~~ 32 (173)
.+++|++++++|+.. .+.|+|.|.+..+.
T Consensus 77 ~~~~~~~~~~~l~~~--~v~l~v~R~p~~~~ 105 (114)
T 2d8i_A 77 DALNSSMLKDFLSQP--SLGLLVRTYPELEE 105 (114)
T ss_dssp GGCCHHHHHHHHTSS--EEEEEEEECCCSCC
T ss_pred CCcCHHHHHHHHhCC--cEEEEEEECCCCCc
Confidence 356789999999864 89999999876533
No 281
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=65.42 E-value=3.9 Score=33.02 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=26.5
Q ss_pred CCcccHHHHHHHHhh--CCCeEEEEEEeCCCccC
Q psy7774 1 MRSATYQLAASVLRQ--CGNSITMLVQYSPDKYH 32 (173)
Q Consensus 1 l~~~th~~av~~L~~--~g~~v~L~V~r~~~~~~ 32 (173)
+.+++|++++.+|+. .|+.|+|+|.|+.+.+.
T Consensus 63 v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~~~ 96 (391)
T 3tsz_A 63 FTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYR 96 (391)
T ss_dssp CTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHG
T ss_pred CCCCCHHHHHHHHHhhcCCCeEEEEEeeCCcccc
Confidence 356789999999995 89999999998776543
No 282
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=63.22 E-value=9.6 Score=28.05 Aligned_cols=28 Identities=18% Similarity=0.242 Sum_probs=22.1
Q ss_pred CcccHHHHHHHHhhCCCeE-EEEEEeCCC
Q psy7774 2 RSATYQLAASVLRQCGNSI-TMLVQYSPD 29 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v-~L~V~r~~~ 29 (173)
.++++++++.+|+..++.| .|+|.|+..
T Consensus 66 ~~~s~~dl~~~l~~~g~~v~~l~V~R~g~ 94 (216)
T 2krg_A 66 EGKQHGDVVSAIRAGGDETKLLVVDRETD 94 (216)
T ss_dssp TTCCTHHHHHHHHHHCSEEEEEECCHHHH
T ss_pred CCCCHHHHHHHHHhcCCeEEEEEEEECCE
Confidence 3568999999999888889 778766443
No 283
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=62.80 E-value=11 Score=24.43 Aligned_cols=27 Identities=22% Similarity=0.180 Sum_probs=21.5
Q ss_pred cccHHHHHHHHhhCCC-eEEEEEEeCCC
Q psy7774 3 SATYQLAASVLRQCGN-SITMLVQYSPD 29 (173)
Q Consensus 3 ~~th~~av~~L~~~g~-~v~L~V~r~~~ 29 (173)
+++|++++++|+.+++ .|.|+|.+..+
T Consensus 70 ~~~~~d~~~~i~~~~~~~v~l~V~~~~~ 97 (111)
T 1vae_A 70 WLTVSEVMKLLKSFGGEEVEMKVVSLLD 97 (111)
T ss_dssp SCCHHHHHHHHHHTTTSEECEEEECEEC
T ss_pred CCCHHHHHHHHHhCCCceEEEEEEecCC
Confidence 4689999999998765 59999986433
No 284
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=62.38 E-value=11 Score=23.99 Aligned_cols=29 Identities=24% Similarity=0.373 Sum_probs=23.6
Q ss_pred CcccHHHHHHHHhhC-CCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQC-GNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~-g~~v~L~V~r~~~~ 30 (173)
.++++++++++|+.. ++.|.|.|.|+...
T Consensus 60 ~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 89 (112)
T 1qau_A 60 VDLSYDSALEVLRGIASETHVVLILRGPEG 89 (112)
T ss_dssp TTSCHHHHHHHHHHSCSSSEEEEEEECCTT
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEEEeCCcc
Confidence 346799999999984 68899999987653
No 285
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=59.53 E-value=12 Score=24.59 Aligned_cols=29 Identities=24% Similarity=0.373 Sum_probs=23.7
Q ss_pred CcccHHHHHHHHhhC-CCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQC-GNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~-g~~v~L~V~r~~~~ 30 (173)
.++++++++++|+.. +..|.|.|.|+...
T Consensus 67 ~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 67 VDLSYDSALEVLRGIASETHVVLILRGPEG 96 (127)
T ss_dssp SSSCHHHHHHHHHSCCSSCEEEEEECCCCS
T ss_pred CCCCHHHHHHHHHhCCCCeEEEEEEeCCce
Confidence 456799999999974 68899999987664
No 286
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=58.22 E-value=16 Score=23.98 Aligned_cols=28 Identities=11% Similarity=0.056 Sum_probs=22.6
Q ss_pred CcccHHHHHHHHhhCCCeEEEEEEeCCCc
Q psy7774 2 RSATYQLAASVLRQCGNSITMLVQYSPDK 30 (173)
Q Consensus 2 ~~~th~~av~~L~~~g~~v~L~V~r~~~~ 30 (173)
.+++|++++++++.. ..|.|+|.|+...
T Consensus 79 ~~~~~~~~~~~~~~~-~~v~l~v~R~g~~ 106 (128)
T 1uf1_A 79 LNILHDEAVRLLKSS-RHLILTVKDVGRL 106 (128)
T ss_dssp SSCCHHHHHHHHTTC-SEEEEEEECCSCC
T ss_pred CCCCHHHHHHHHhcC-CeEEEEEEECCcc
Confidence 567789999999884 6899999987654
No 287
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=46.41 E-value=27 Score=22.77 Aligned_cols=26 Identities=12% Similarity=0.180 Sum_probs=22.0
Q ss_pred cHHHHHHHHhhC-CCeEEEEEEeCCCc
Q psy7774 5 TYQLAASVLRQC-GNSITMLVQYSPDK 30 (173)
Q Consensus 5 th~~av~~L~~~-g~~v~L~V~r~~~~ 30 (173)
+++++..+|+.. +..|.|+|.|+...
T Consensus 83 ~~~~~~~~l~~~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 83 NREEAVALLTSEENKNFSLLIARPELQ 109 (124)
T ss_dssp SHHHHHHHHTCSSCCSCCEEEEECSSC
T ss_pred CHHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 588999999985 78899999987664
No 288
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=38.10 E-value=35 Score=22.92 Aligned_cols=39 Identities=31% Similarity=0.348 Sum_probs=23.6
Q ss_pred EEccCCCcccEEEEcc-----CCCCEEEEEecCCCcccccCCCCCCEEE
Q psy7774 95 IETRKCSNLGISLVGG-----NAVGIYVHSVQSGSLGYSAGLRTGDRIL 138 (173)
Q Consensus 95 l~~~~~~~lG~~l~gg-----~~~~i~V~~v~~gs~A~~~gL~~gD~Il 138 (173)
|.-.+ +|+||-...+ ...-|||+. +--.+-+|+.||.|.
T Consensus 55 lei~~-dG~GFlr~~~~~y~~~~~DiyVs~----~~irrf~lr~GD~V~ 98 (130)
T 1a62_A 55 LEILQ-DGFGFLRSADSSYLAGPDDIYVSP----SQIRRFNLRTGDTIS 98 (130)
T ss_dssp EEECT-TSCEEEECGGGTTCCCTTCEEECH----HHHHHTTCCTTCEEE
T ss_pred EEEcC-CCeEEEecCCcCCCCCCCCEEECH----HHHhHhCCCCCCEEE
Confidence 33334 6899987653 234688752 222234899999775
No 289
>1cq3_A Viral chemokine inhibitor; beta sandwich, cytokine; 1.85A {Cowpox virus} SCOP: b.27.1.1 PDB: 2grk_A 2ffk_A 2fin_A
Probab=34.37 E-value=22 Score=25.87 Aligned_cols=25 Identities=24% Similarity=0.329 Sum_probs=22.0
Q ss_pred cccHHHHHHHHhhCCCeEEEEEEeC
Q psy7774 3 SATYQLAASVLRQCGNSITMLVQYS 27 (173)
Q Consensus 3 ~~th~~av~~L~~~g~~v~L~V~r~ 27 (173)
.++|+||++||+.|.=.|.+....+
T Consensus 120 sitr~Ealali~~CevsIdIKCs~e 144 (233)
T 1cq3_A 120 AITREEALSMIKDCEMSINIKCSEE 144 (233)
T ss_dssp CEEHHHHHHHHHHCEEEEEEEECCC
T ss_pred ccCHHHHHHHhhhceEEEEEEeecc
Confidence 4799999999999998888888765
No 290
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=25.69 E-value=93 Score=17.84 Aligned_cols=22 Identities=14% Similarity=0.090 Sum_probs=17.9
Q ss_pred CCcccHHHHHHHHhhCCCeEEE
Q psy7774 1 MRSATYQLAASVLRQCGNSITM 22 (173)
Q Consensus 1 l~~~th~~av~~L~~~g~~v~L 22 (173)
|.+.+.++|.++|+++|=.+..
T Consensus 13 v~G~~~~~A~~~L~~~Gl~~~~ 34 (71)
T 3ouv_A 13 VAGQTVDVAQKNMNVYGFTKFS 34 (71)
T ss_dssp CTTCBHHHHHHHHHHTTCCCEE
T ss_pred cCCCCHHHHHHHHHHCCCeEEE
Confidence 5688999999999999855543
No 291
>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ...
Probab=22.07 E-value=89 Score=21.79 Aligned_cols=44 Identities=7% Similarity=-0.046 Sum_probs=26.0
Q ss_pred CCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHHhCC----CCeEEEEEEEC
Q psy7774 123 GSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKP----ADKVTVLAHSD 171 (173)
Q Consensus 123 gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~----g~~v~l~v~r~ 171 (173)
|.+-.. +.+++|..|++|.|++- +.|..+|+.+ .-...+.+...
T Consensus 106 G~p~~wvArVk~G~ilfei~gv~~-----~~A~eAlr~A~~KlP~ktkiv~~~~ 154 (157)
T 1ffk_F 106 GKSVGTAARSHGANHDFIAWVNPD-----PAVEFAWRRAYMKVTPTVNIDSSPA 154 (157)
T ss_pred CCccEEEEEEcCCCEEEEEeccCH-----HHHHHHHHHHHhhCCCcEEEEEecC
Confidence 344344 56999999999998654 3455555433 33344554443
No 292
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=22.03 E-value=38 Score=19.03 Aligned_cols=18 Identities=11% Similarity=0.228 Sum_probs=14.8
Q ss_pred cccHHHHHHHHhhCCCeE
Q psy7774 3 SATYQLAASVLRQCGNSI 20 (173)
Q Consensus 3 ~~th~~av~~L~~~g~~v 20 (173)
+.+.++|+++|+.+.+.|
T Consensus 22 GFsr~~ai~AL~~a~nnv 39 (52)
T 2ooa_A 22 GYAFEEVKRALEIAQNNV 39 (52)
T ss_dssp TCCHHHHHHHHHHTTTCH
T ss_pred CCCHHHHHHHHHHhCCCH
Confidence 568899999999987654
No 293
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=20.56 E-value=1e+02 Score=20.89 Aligned_cols=21 Identities=33% Similarity=0.493 Sum_probs=16.2
Q ss_pred CCcccc-cCCCCCCEEEEECCE
Q psy7774 123 GSLGYS-AGLRTGDRILEYNGT 143 (173)
Q Consensus 123 gs~A~~-~gL~~gD~Il~Vng~ 143 (173)
|.+-.. +.+++|..|++|.|+
T Consensus 88 G~~~~wva~Vk~G~ilfEi~gv 109 (135)
T 3bbo_O 88 GSPEYWVAVVKPGRILYEISGV 109 (135)
T ss_dssp SCSSCCCCCCCTTCEEEEECSS
T ss_pred CCceEEEEEECCCCEEEEEecC
Confidence 445444 569999999999993
No 294
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=20.35 E-value=34 Score=22.66 Aligned_cols=36 Identities=22% Similarity=0.310 Sum_probs=23.5
Q ss_pred CCcccc-cCCCCCCEEEEECCEecCCCCHHHHHHHHhCCCC
Q psy7774 123 GSLGYS-AGLRTGDRILEYNGTDLRAATAEEAAYELAKPAD 162 (173)
Q Consensus 123 gs~A~~-~gL~~gD~Il~Vng~~~~~~~~~~~~~~l~~~g~ 162 (173)
|.+-.. +.+++|..|++|.|. .+.+.|..+|+.+..
T Consensus 75 G~~~~wva~Vk~G~ilfEi~g~----~~~~~a~eAlr~a~~ 111 (118)
T 2ftc_I 75 GAIDHYVTPVKAGRLVVEMGGR----CEFEEVQGFLDQVAH 111 (118)
T ss_pred CCccEEEEEECCCCEEEEEecc----CCHHHHHHHHHHHHh
Confidence 344444 468999999999992 345666666654433
Done!