BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7777
(294 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q01205|ODO2_RAT Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Rattus norvegicus GN=Dlst PE=1 SV=2
Length = 454
Score = 245 bits (625), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 161/258 (62%), Gaps = 39/258 (15%)
Query: 64 PPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVP 123
PP G RSE R KMNRMRQRIAQRLKEAQN AMLTTFNE+DM SN
Sbjct: 209 PPLAEAGAAKGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDM---SNIQEMRA 265
Query: 124 APCNGIIEERFVEDG---ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPEC 180
+ +++ ++ G A VKA + +P V E R ++
Sbjct: 266 RHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDI------- 318
Query: 181 KPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGG 216
SVAVATP+GLVVPVIRN LAIED DGGTFTISNGG
Sbjct: 319 --SVAVATPRGLVVPVIRNVETMNYADIERTINELGEKARKNELAIEDMDGGTFTISNGG 376
Query: 217 VFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLF 276
VFGSL GTPIINPPQSAILGMHG F+RPVA+ G+V V+PMMYVALTYDHRLIDGREAV F
Sbjct: 377 VFGSLFGTPIINPPQSAILGMHGIFDRPVAVGGKVEVRPMMYVALTYDHRLIDGREAVTF 436
Query: 277 LRKIKAAVEDPRIILAGL 294
LRKIKAAVEDPR++L L
Sbjct: 437 LRKIKAAVEDPRVLLLDL 454
Score = 38.9 bits (89), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 118 TSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPT 153
TS+ VP+P NGIIE V DG V+ G LF ++ T
Sbjct: 112 TSVQVPSPANGIIEALLVPDGGKVEGGTPLFTLRKT 147
>sp|P36957|ODO2_HUMAN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Homo sapiens GN=DLST PE=1 SV=4
Length = 453
Score = 244 bits (622), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 164/262 (62%), Gaps = 40/262 (15%)
Query: 60 TVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTS 119
TV P A+P G RSE R KMNRMRQRIAQRLKEAQN AMLTTFNEIDM SN
Sbjct: 205 TVAPPLAEPGAG-KGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDM---SNIQ 260
Query: 120 MPVPAPCNGIIEERFVEDG---ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSG 176
+++ ++ G A VKA + +P V E R ++
Sbjct: 261 EMRARHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDTTKEVVYRDYIDI--- 317
Query: 177 PPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTI 212
SVAVATP+GLVVPVIRN LAIED DGGTFTI
Sbjct: 318 ------SVAVATPRGLVVPVIRNVEAMNFADIERTITELGEKARKNELAIEDMDGGTFTI 371
Query: 213 SNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGRE 272
SNGGVFGSL GTPIINPPQSAILGMHG F+RPVAI G+V V+PMMYVALTYDHRLIDGRE
Sbjct: 372 SNGGVFGSLFGTPIINPPQSAILGMHGIFDRPVAIGGKVEVRPMMYVALTYDHRLIDGRE 431
Query: 273 AVLFLRKIKAAVEDPRIILAGL 294
AV FLRKIKAAVEDPR++L L
Sbjct: 432 AVTFLRKIKAAVEDPRVLLLDL 453
Score = 38.1 bits (87), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 118 TSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPT 153
TS+ VP+P NG+IE V DG V+ G LF ++ T
Sbjct: 111 TSVQVPSPANGVIEALLVPDGGKVEGGTPLFTLRKT 146
>sp|Q9D2G2|ODO2_MOUSE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Mus musculus GN=Dlst PE=1 SV=1
Length = 454
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 160/258 (62%), Gaps = 39/258 (15%)
Query: 64 PPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVP 123
PP G RSE R KMNRMRQRIAQRLKEAQN AMLTTFNE+DM SN
Sbjct: 209 PPLAEAGAAKGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEVDM---SNIQEMRA 265
Query: 124 APCNGIIEERFVEDG---ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPEC 180
+ +++ ++ G A VKA + +P V E R ++
Sbjct: 266 RHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDATKEVVYRDYIDI------- 318
Query: 181 KPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGG 216
SVAVATP+GLVVPVIRN LAIED DGGTFTISNGG
Sbjct: 319 --SVAVATPRGLVVPVIRNVETMNYADIERTINELGEKARKNELAIEDMDGGTFTISNGG 376
Query: 217 VFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLF 276
VFGSL GTPIINPPQSAILGMH F+RPVA+ G+V V+PMMYVALTYDHRLIDGREAV F
Sbjct: 377 VFGSLFGTPIINPPQSAILGMHAIFDRPVAVGGKVEVRPMMYVALTYDHRLIDGREAVTF 436
Query: 277 LRKIKAAVEDPRIILAGL 294
LRKIKAAVEDPR++L L
Sbjct: 437 LRKIKAAVEDPRVLLLDL 454
Score = 38.9 bits (89), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 118 TSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPT 153
TS+ VP+P NGIIE V DG V+ G LF ++ T
Sbjct: 112 TSVQVPSPANGIIEALLVPDGGKVEGGTPLFTLRKT 147
>sp|Q9N0F1|ODO2_PIG Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Sus scrofa GN=DLST PE=1 SV=1
Length = 455
Score = 238 bits (607), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/258 (54%), Positives = 159/258 (61%), Gaps = 39/258 (15%)
Query: 64 PPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVP 123
PP + G R+E R KMNRMRQRIAQRLKEAQN AMLTTFNEIDM SN
Sbjct: 210 PPVAEPGAVKGLRAEHREKMNRMRQRIAQRLKEAQNTCAMLTTFNEIDM---SNIQDMRA 266
Query: 124 APCNGIIEERFVEDG---ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPEC 180
+++ ++ G A VKA + +P V E R ++
Sbjct: 267 RHKEAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDTTKEVVYRDYIDI------- 319
Query: 181 KPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGG 216
SVAVATP+GLVVPVIRN LAIED DGGTFTISNGG
Sbjct: 320 --SVAVATPRGLVVPVIRNVETMNYADIERTISELGEKARKNELAIEDMDGGTFTISNGG 377
Query: 217 VFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLF 276
VFGSL GTPIINPPQSAILGMH +RPVA+ G+V ++PMMYVALTYDHRLIDGREAV F
Sbjct: 378 VFGSLFGTPIINPPQSAILGMHAIVDRPVAVGGKVEIRPMMYVALTYDHRLIDGREAVTF 437
Query: 277 LRKIKAAVEDPRIILAGL 294
LRKIKAAVEDPR++L L
Sbjct: 438 LRKIKAAVEDPRVLLLDL 455
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 118 TSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPT 153
TS+ VP+P NG+IE V DG V+ G LF ++ T
Sbjct: 112 TSVQVPSPANGVIEALLVPDGGKVEGGTPLFTLRKT 147
>sp|P11179|ODO2_BOVIN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Bos taurus GN=DLST PE=1 SV=2
Length = 455
Score = 237 bits (604), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 149/276 (53%), Positives = 167/276 (60%), Gaps = 43/276 (15%)
Query: 50 PSQ-LNAIEAATVKLPPADPTKEIS---GTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLT 105
PSQ L + + VK A P E G RSE R KMNRMRQRIAQRLKEAQN AMLT
Sbjct: 192 PSQPLTSKPVSAVKPTAAPPRAEAGAGVGLRSEHREKMNRMRQRIAQRLKEAQNTCAMLT 251
Query: 106 TFNEIDMRKESNTSMPVPAPCNGIIEERFVEDG---ATVKAGQQLFKIKPTVCTPNSKYR 162
TFNEIDM SN + +++ ++ G A VKA + +P V
Sbjct: 252 TFNEIDM---SNIQEMRARHKDAFLKKHNLKLGFMSAFVKASAFALQEQPVVNAVIDDAT 308
Query: 163 AEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN----------------------- 199
E R ++ SVAVATP+GLVVPVIRN
Sbjct: 309 KEVVYRDYIDI---------SVAVATPRGLVVPVIRNVETMNYADIERTISELGEKARKN 359
Query: 200 -LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMY 258
LAIED DGGTFTISNGGVFGSL GTPIINPPQSAILGMH +RPV I G+V V+PMMY
Sbjct: 360 ELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHAIVDRPVVIGGKVEVRPMMY 419
Query: 259 VALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL 294
VALTYDHRLIDGREAV FLRKIKAAVEDPR++L L
Sbjct: 420 VALTYDHRLIDGREAVTFLRKIKAAVEDPRVLLLDL 455
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 118 TSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPT 153
TS+ VP+P NG+IE V DG V+ G LF ++ T
Sbjct: 112 TSVQVPSPANGVIEALLVPDGGKVEGGTPLFTLRKT 147
>sp|Q90512|ODO2_TAKRU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
(Fragment) OS=Takifugu rubripes GN=dlst PE=3 SV=1
Length = 409
Score = 237 bits (604), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/254 (53%), Positives = 156/254 (61%), Gaps = 39/254 (15%)
Query: 65 PADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPA 124
P P G R E RVKM+RMR RIAQRLKEAQN AMLTTFNE+DM SN
Sbjct: 165 PTLPEPSTLGGRGESRVKMSRMRLRIAQRLKEAQNTCAMLTTFNEVDM---SNIQEMRTL 221
Query: 125 PCNGIIEERFVEDG---ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECK 181
+ +++ ++ G A VKA +P V E R ++
Sbjct: 222 HKDAFLKKHSIKLGFMSAFVKAAAHALTDQPAVNAVIDGATNEIVYRDYVDI-------- 273
Query: 182 PSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGV 217
SVAVATPKGLVVPVIRN LA+ED DGGTFTISNGGV
Sbjct: 274 -SVAVATPKGLVVPVIRNVETMNFADIERTINALGEKARNNELAVEDMDGGTFTISNGGV 332
Query: 218 FGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFL 277
FGSL GTPIINPPQSAILGMHG F+RPVA+ G+ ++PMMYVALTYDHRL+DGREAV FL
Sbjct: 333 FGSLFGTPIINPPQSAILGMHGIFQRPVAVDGKAEIRPMMYVALTYDHRLVDGREAVTFL 392
Query: 278 RKIKAAVEDPRIIL 291
RKIKAAVEDPR +L
Sbjct: 393 RKIKAAVEDPRALL 406
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 118 TSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIK 151
TS+ VP+P G+IEE V DG V+ G LFK++
Sbjct: 80 TSVQVPSPAAGVIEELLVPDGGKVEGGTPLFKLR 113
>sp|P19262|ODO2_YEAST Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=KGD2 PE=1 SV=2
Length = 463
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 143/258 (55%), Gaps = 71/258 (27%)
Query: 76 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEER-F 134
R+E RVKMNRMR RIA+RLKE+QN A LTTFNE+DM + ++E R
Sbjct: 233 RTETRVKMNRMRLRIAERLKESQNTAASLTTFNEVDM--------------SALMEMRKL 278
Query: 135 VEDGATVKAGQQL--FKIKPTVCTPNSK---------------YRAEKKLRPGRELNSGP 177
+D K G + + CT +K YR +
Sbjct: 279 YKDEIIKKTGTKFGFMGLFSKACTLAAKDIPAVNGAIEGDQIVYRDYTDI---------- 328
Query: 178 PECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTIS 213
SVAVATPKGLV PV+RN L +ED GGTFTIS
Sbjct: 329 -----SVAVATPKGLVTPVVRNAESLSVLDIENEIVRLSHKARDGKLTLEDMTGGTFTIS 383
Query: 214 NGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREA 273
NGGVFGSL GTPIIN PQ+A+LG+HG ERPV + GQ+V +PMMY+ALTYDHRL+DGREA
Sbjct: 384 NGGVFGSLYGTPIINSPQTAVLGLHGVKERPVTVNGQIVSRPMMYLALTYDHRLLDGREA 443
Query: 274 VLFLRKIKAAVEDPRIIL 291
V FL+ +K +EDPR +L
Sbjct: 444 VTFLKTVKELIEDPRKML 461
>sp|Q869Y7|ODO2_DICDI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Dictyostelium discoideum GN=odhB PE=1 SV=1
Length = 439
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 142/239 (59%), Gaps = 35/239 (14%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGA 139
RVKM R+RQR AQRLK++QN AMLTTFNE+DM N +F A
Sbjct: 212 RVKMTRIRQRTAQRLKDSQNTAAMLTTFNELDMSALMNMRKTYKDEFEKKHGVKFGFMSA 271
Query: 140 TVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN 199
VKA K +P V N+ E + +N +VAV+ P+GLVVPVIRN
Sbjct: 272 FVKASTIALKEQPIV---NASVE-ENDIVYHNNVN-------INVAVSAPRGLVVPVIRN 320
Query: 200 ------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAIL 235
LAIEDS GGTFTISNGGVFGS+ GTPIINPPQSAIL
Sbjct: 321 CENLSFADIEKEIGRLSGLARNDALAIEDSIGGTFTISNGGVFGSMFGTPIINPPQSAIL 380
Query: 236 GMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL 294
GMH +RP + GQVVV+P+MY+ALTYDHR+IDGREAV FL+KIK +E+P IL L
Sbjct: 381 GMHAIKDRPYVVNGQVVVRPIMYLALTYDHRIIDGREAVTFLKKIKDVLENPERILLEL 439
>sp|O94681|ODO2_SCHPO Probable dihydrolipoyllysine-residue succinyltransferase component
of 2-oxoglutarate dehydrogenase complex, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=kgd2 PE=3 SV=1
Length = 452
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/250 (49%), Positives = 143/250 (57%), Gaps = 45/250 (18%)
Query: 73 SGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE 132
S +R+E RVKMNRMR RIA+RLKE+QN A LTTFNE DM V A +E
Sbjct: 215 SFSRNEDRVKMNRMRLRIAERLKESQNRAASLTTFNECDMSA-------VVALRKKYKDE 267
Query: 133 RFVEDGATV-------KAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVA 185
E G + KA Q K P + N E K G L C S+A
Sbjct: 268 ILKETGVKIGFMSFFSKACTQAMKQIPAI---NGSIEGEGK---GDTLVYRD-FCDLSIA 320
Query: 186 VATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSL 221
VATPKGLV PVIRN LAIED GTFTISNGG+FGSL
Sbjct: 321 VATPKGLVTPVIRNAESMSLLEIESAIATLGSKARAGKLAIEDMASGTFTISNGGIFGSL 380
Query: 222 LGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIK 281
GTPIIN PQ+A+LG+H ERPV I GQVV +PMMY+ALTYDHR++DGREAV FLR +K
Sbjct: 381 YGTPIINLPQTAVLGLHAIKERPVVINGQVVPRPMMYLALTYDHRMVDGREAVTFLRLVK 440
Query: 282 AAVEDPRIIL 291
+EDP +L
Sbjct: 441 EYIEDPAKML 450
>sp|P45302|ODO2_HAEIN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sucB PE=3 SV=1
Length = 409
Score = 198 bits (503), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/288 (42%), Positives = 162/288 (56%), Gaps = 59/288 (20%)
Query: 37 NLQKRSKYRQSQQPSQLNAIEAATVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKE 96
++++ RQ+QQ Q A E T+ RSE+RV M R+R+RIA+RL E
Sbjct: 146 DIEREIAKRQAQQVKQEAATEQNTISTVA-------YSARSEKRVPMTRLRKRIAERLLE 198
Query: 97 AQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCT 156
A+N AMLTTFNE+DM+ P+ E+F E +V+ G F IK V
Sbjct: 199 AKNSTAMLTTFNEVDMQ-------PI-MTLRKTYGEKF-EKQHSVRLGFMSFYIKAVV-- 247
Query: 157 PNSKYRAEKKLRPGRELNSG--------PPECKPSVAVATPKGLVVPVIRN--------- 199
+ L+ E+N+ S+AV+TP+GLV PV+R+
Sbjct: 248 --------EALKRYPEVNASIDGDDVVYHNYFDISIAVSTPRGLVTPVLRDCDKLSMAEI 299
Query: 200 ---------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERP 244
L +ED GG FTI+NGGVFGSL+ TPIINPPQSAILGMH ERP
Sbjct: 300 EKQIKALAEKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKERP 359
Query: 245 VAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDP-RIIL 291
+A+ GQVV++PMMY+AL+YDHRLIDGRE+V FL IK +EDP R++L
Sbjct: 360 IALNGQVVIRPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 407
>sp|Q68XI8|ODO2_RICTY Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucB PE=3 SV=1
Length = 398
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/263 (44%), Positives = 148/263 (56%), Gaps = 49/263 (18%)
Query: 64 PPADPTKEISGTRSE--QRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMP 121
P T I+ T E QRV+M+R+R+ IAQRLK++QN A+LTTFNEIDM K
Sbjct: 153 PITIETHAINKTNEERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSK------- 205
Query: 122 VPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVC------TPNSKYRAEKKLRPGRELNS 175
V A N EE E TVK G F +K T+ + N++ + L
Sbjct: 206 VIALRNQYKEE--FEKKHTVKLGFMSFFVKATIEALKLIPSINAEIDGDDLLYKNY---- 259
Query: 176 GPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFT 211
VAV T +GLVVPVIR+ L+I D GGTF+
Sbjct: 260 ----YDIGVAVGTEQGLVVPVIRDADKMSFADIEQAIGNLAKKAREGKLSISDLSGGTFS 315
Query: 212 ISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGR 271
ISNGGV+GSLL TPIINPPQS ILG+H T ER V I G++ ++PMMY+AL+YDHR+IDG+
Sbjct: 316 ISNGGVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEIRPMMYIALSYDHRIIDGK 375
Query: 272 EAVLFLRKIKAAVEDPRIILAGL 294
E V FL KIK +E+P +L L
Sbjct: 376 EGVSFLVKIKNLIENPEKLLLNL 398
>sp|Q9FLQ4|ODO2A_ARATH Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex 1, mitochondrial
OS=Arabidopsis thaliana GN=At5g55070 PE=1 SV=1
Length = 464
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 147/261 (56%), Gaps = 58/261 (22%)
Query: 62 KLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMP 121
+LPP D E+RV M R+R+R+A RLK++QN A+LTTFNE+DM +N
Sbjct: 228 QLPPKD---------RERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDM---TNLMKL 275
Query: 122 VPAPCNGIIEERFVEDG-------ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELN 174
+ +E+ V+ G A V A Q + + + YR +
Sbjct: 276 RSQYKDAFLEKHGVKLGLMSGFIKAAVSALQHQPVVNAVIDGDDIIYRDYVDI------- 328
Query: 175 SGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTF 210
S+AV T KGLVVPVIR+ ++I++ GG+F
Sbjct: 329 --------SIAVGTSKGLVVPVIRDADKMNFADIEKTINGLAKKATEGTISIDEMAGGSF 380
Query: 211 TISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDG 270
T+SNGGV+GSL+ TPIINPPQSAILGMH +RP+ + G VV +PMMYVALTYDHRLIDG
Sbjct: 381 TVSNGGVYGSLISTPIINPPQSAILGMHSIVQRPMVVGGSVVPRPMMYVALTYDHRLIDG 440
Query: 271 REAVLFLRKIKAAVEDPRIIL 291
REAV FLR+IK VEDP+ +L
Sbjct: 441 REAVYFLRRIKDVVEDPQRLL 461
>sp|Q9ZDY4|ODO2_RICPR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
prowazekii (strain Madrid E) GN=sucB PE=3 SV=1
Length = 401
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/266 (43%), Positives = 150/266 (56%), Gaps = 51/266 (19%)
Query: 59 ATVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNT 118
T++ P + T E QRV+M+R+R+ IAQRLK++QN A+LTTFNEIDM K
Sbjct: 157 VTIETPALNKTNE----ERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSK---- 208
Query: 119 SMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPG--RELNSG 176
V A N EE E TVK G F +K T+ KL P E++
Sbjct: 209 ---VIALRNQYKEE--FEKKHTVKLGFMSFFVKATI--------EALKLIPSINAEIDGD 255
Query: 177 PPECKP----SVAVATPKGLVVPVIRN------------------------LAIEDSDGG 208
K VAV T +GLVVPV+R+ L++ D GG
Sbjct: 256 DLLYKNYYDIGVAVGTDQGLVVPVVRDADKMGFADVEQAIGDLAKKAREGKLSMSDLSGG 315
Query: 209 TFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLI 268
TF+ISNGGV+GSLL TPIINPPQS ILG+H T ER V I G++ ++PMMY+AL+YDHR+I
Sbjct: 316 TFSISNGGVYGSLLSTPIINPPQSGILGLHKTEERAVVIDGKIEIRPMMYIALSYDHRII 375
Query: 269 DGREAVLFLRKIKAAVEDPRIILAGL 294
DG+E V FL KIK +E+P +L L
Sbjct: 376 DGKEGVSFLVKIKNLIENPEKLLLNL 401
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 119 SMPVPAPCNGIIEERFVEDGATVKAGQQLFKIK-----PTVCTPNSKYRAEKKLRPGREL 173
++ V APCNG IE+ DGA V G+++ +I T CT N+ Y+ + ++ E
Sbjct: 45 TLEVNAPCNGTIEKIAKTDGANVTVGEEIGEINEVVDTDTACTNNNSYKKQAIVQHDSEQ 104
Query: 174 NSGPPECKPSVAVATPKGLVVPVIRNLAIED 204
P A+ ++ P ++ L E+
Sbjct: 105 IVDKP--------ASSSNILAPSVQKLVTEN 127
>sp|Q9I3D2|ODO2_PSEAE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=sucB PE=3 SV=1
Length = 409
Score = 184 bits (466), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 142/247 (57%), Gaps = 43/247 (17%)
Query: 74 GTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMR----KESNTSMPVPAPCNGI 129
G R E+RV M R+R ++A+RL EAQ+ AMLTTFNE++M+ S NG+
Sbjct: 175 GDRVEKRVPMTRLRAKVAERLVEAQSAMAMLTTFNEVNMKPIMDLRSKYKDLFEKKHNGV 234
Query: 130 IEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATP 189
R VKA + K P V N+ + G + VAV++
Sbjct: 235 ---RLGFMSFFVKAATEALKRFPGV---NASIDGNDIVYHGYQ--------DIGVAVSSD 280
Query: 190 KGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTP 225
+GLVVPV+RN L IED GGTFTISNGGVFGSLL TP
Sbjct: 281 RGLVVPVLRNAEFMSLAEIEGGIANFGKKAKEGKLTIEDMTGGTFTISNGGVFGSLLSTP 340
Query: 226 IINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVE 285
I+NPPQ+AILGMH ERP+A+ GQVV+ PMMY+AL+YDHRLIDG+EAV FL IK +E
Sbjct: 341 IVNPPQTAILGMHKIQERPMAVNGQVVILPMMYLALSYDHRLIDGKEAVSFLVAIKDLLE 400
Query: 286 DP-RIIL 291
DP R++L
Sbjct: 401 DPARLLL 407
>sp|Q8H107|ODO2B_ARATH Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex 2, mitochondrial
OS=Arabidopsis thaliana GN=At4g26910 PE=1 SV=2
Length = 464
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 139/245 (56%), Gaps = 49/245 (20%)
Query: 78 EQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVED 137
E+RV M R+R+R+A RLK++QN A+LTTFNE+DM +N + E+ V+
Sbjct: 235 ERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDM---TNLMKLRSQYKDAFYEKHGVKL 291
Query: 138 G-------ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPK 190
G A V A Q + + + YR + S+AV T K
Sbjct: 292 GLMSGFIKAAVSALQHQPVVNAVIDGDDIIYRDYVDI---------------SIAVGTSK 336
Query: 191 GLVVPVIR------------------------NLAIEDSDGGTFTISNGGVFGSLLGTPI 226
GLVVPVIR ++I++ GG+FT+SNGGV+GSL+ TPI
Sbjct: 337 GLVVPVIRGADKMNFAEIEKTINSLAKKANEGTISIDEMAGGSFTVSNGGVYGSLISTPI 396
Query: 227 INPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVED 286
INPPQSAILGMH RP+ + G VV +PMMYVALTYDHRLIDGREAV FLR++K VED
Sbjct: 397 INPPQSAILGMHSIVSRPMVVGGSVVPRPMMYVALTYDHRLIDGREAVYFLRRVKDVVED 456
Query: 287 PRIIL 291
P+ +L
Sbjct: 457 PQRLL 461
>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucB PE=3
SV=1
Length = 395
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 142/246 (57%), Gaps = 47/246 (19%)
Query: 79 QRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDG 138
QRV+M+R+R+ IAQRLK++QN A+LTTFNEIDM K V A N EE E
Sbjct: 167 QRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSK-------VIALRNQYKEE--FEKK 217
Query: 139 ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPG--RELNSGPPECKP----SVAVATPKGL 192
VK G F +K T+ KL P E++ K VAV T +GL
Sbjct: 218 HAVKLGFMSFFVKATIEAL--------KLIPSVNAEIDGDDLVYKNYYDIGVAVGTEQGL 269
Query: 193 VVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIIN 228
VVPV+R+ L++ D GGTF+ISNGGV+GSLL TPIIN
Sbjct: 270 VVPVVRDADKMGFAEVEKTIGILAKQAREGKLSMADLSGGTFSISNGGVYGSLLSTPIIN 329
Query: 229 PPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
PPQS ILG+H T ER V I G++ ++PMMY+AL+YDHR+IDG+E V FL KIK +E+P
Sbjct: 330 PPQSGILGLHKTEERAVVIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKQLIENPE 389
Query: 289 IILAGL 294
+L L
Sbjct: 390 KLLLNL 395
>sp|P20708|ODO2_AZOVI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Azotobacter
vinelandii GN=sucB PE=1 SV=2
Length = 399
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 145/243 (59%), Gaps = 35/243 (14%)
Query: 74 GTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEER 133
G R E+RV M R+R ++A+RL EAQ+ AMLTTFNE++M+ M + A + E+
Sbjct: 165 GDRVEKRVPMTRLRAKVAERLVEAQSSMAMLTTFNEVNMKP----VMELRAKYKDLFEK- 219
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
+G V+ G F +K V + + + G + VAV++ +GLV
Sbjct: 220 -THNG--VRLGFMSFFVKAAVEALKRQPGVNASIDGNDIVYHGYQDI--GVAVSSDRGLV 274
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VPV+RN L IE+ GGTFTISNGGVFGSLL TPI+NP
Sbjct: 275 VPVLRNAEFMSLAEIEGGINEFGKKAKAGKLTIEEMTGGTFTISNGGVFGSLLSTPIVNP 334
Query: 230 PQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDP-R 288
PQ+AILGMH ERP+A+ GQVV+ PMMY+AL+YDHRLIDG+EAV FL +K +EDP R
Sbjct: 335 PQTAILGMHKIQERPMAVNGQVVILPMMYLALSYDHRLIDGKEAVTFLVTMKDLLEDPAR 394
Query: 289 IIL 291
++L
Sbjct: 395 LLL 397
>sp|Q4UKI7|ODO2_RICFE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucB PE=3 SV=1
Length = 401
Score = 182 bits (461), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/246 (45%), Positives = 142/246 (57%), Gaps = 47/246 (19%)
Query: 79 QRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDG 138
QRV+M+R+R+ IAQRLK++QN A+LTTFNEIDM K V A N EE E
Sbjct: 173 QRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSK-------VIALRNQYKEE--FEKK 223
Query: 139 ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPG--RELNSGPPECKP----SVAVATPKGL 192
VK G F +K T+ KL P E++ K VAV T +GL
Sbjct: 224 HLVKLGFMSFFVKATI--------EALKLIPSVNAEIDGDDLVYKNYYDIGVAVGTEQGL 275
Query: 193 VVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIIN 228
VVPV+R+ L++ D GGTF+ISNGGV+GSLL TPIIN
Sbjct: 276 VVPVVRDADKMGFAEVEKAIGTLAKKAREGKLSMADLSGGTFSISNGGVYGSLLSTPIIN 335
Query: 229 PPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
PPQS ILG+H T ER V I G++ ++PMMY+AL+YDHR+IDG+E V FL KIK +E+P
Sbjct: 336 PPQSGILGLHKTEERAVVIDGKIEIRPMMYIALSYDHRIIDGKEGVSFLVKIKELIENPE 395
Query: 289 IILAGL 294
+L L
Sbjct: 396 KLLLNL 401
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 109 EIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKP-----TVCTPNSKYRA 163
EI+ K ++ V APC+G I + DGA V G+++ +I T T N +A
Sbjct: 38 EIETEK---VTLEVNAPCDGTIGKISKTDGANVAVGEEIGEINEGAAANTAGTNNESAKA 94
Query: 164 EKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRNLAIED 204
+ +P E P KP+V ++ P ++ L E+
Sbjct: 95 QAVTQPTSE----KPVEKPAVV----NNILAPSVQKLVTEN 127
>sp|P0AFG6|ODO2_ECOLI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Escherichia coli
(strain K12) GN=sucB PE=1 SV=2
Length = 405
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 144/249 (57%), Gaps = 52/249 (20%)
Query: 76 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFV 135
RSE+RV M R+R+R+A+RL EA+N AMLTTFNE++M+ M + E+R
Sbjct: 174 RSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKP----IMDLRKQYGEAFEKRH- 228
Query: 136 EDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPP--------ECKPSVAVA 187
++ G F +K V + L+ E+N+ S+AV+
Sbjct: 229 ----GIRLGFMSFYVKAVV----------EALKRYPEVNASIDGDDVVYHNYFDVSMAVS 274
Query: 188 TPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLG 223
TP+GLV PV+R+ L +ED GG FTI+NGGVFGSL+
Sbjct: 275 TPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS 334
Query: 224 TPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAA 283
TPIINPPQSAILGMH +RP+A+ GQV + PMMY+AL+YDHRLIDGRE+V FL IK
Sbjct: 335 TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKEL 394
Query: 284 VEDP-RIIL 291
+EDP R++L
Sbjct: 395 LEDPTRLLL 403
>sp|P0AFG7|ODO2_ECO57 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Escherichia coli
O157:H7 GN=sucB PE=1 SV=2
Length = 405
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 144/249 (57%), Gaps = 52/249 (20%)
Query: 76 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFV 135
RSE+RV M R+R+R+A+RL EA+N AMLTTFNE++M+ M + E+R
Sbjct: 174 RSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKP----IMDLRKQYGEAFEKRH- 228
Query: 136 EDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPP--------ECKPSVAVA 187
++ G F +K V + L+ E+N+ S+AV+
Sbjct: 229 ----GIRLGFMSFYVKAVV----------EALKRYPEVNASIDGDDVVYHNYFDVSMAVS 274
Query: 188 TPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLG 223
TP+GLV PV+R+ L +ED GG FTI+NGGVFGSL+
Sbjct: 275 TPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS 334
Query: 224 TPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAA 283
TPIINPPQSAILGMH +RP+A+ GQV + PMMY+AL+YDHRLIDGRE+V FL IK
Sbjct: 335 TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKEL 394
Query: 284 VEDP-RIIL 291
+EDP R++L
Sbjct: 395 LEDPTRLLL 403
>sp|P52993|ODO2_CUPNH Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Cupriavidus
necator (strain ATCC 17699 / H16 / DSM 428 / Stanier
337) GN=sucB PE=3 SV=1
Length = 416
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 146/245 (59%), Gaps = 35/245 (14%)
Query: 74 GTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEER 133
G R E+RV M+R+R RIA+RL ++Q+ NA+LTTFNE++M+ PV N ++R
Sbjct: 183 GDRPEERVPMSRLRARIAERLLQSQSTNAILTTFNEVNMK-------PVMDLRNKY-KDR 234
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F E VK G F +K V + + G + +AV +P+GLV
Sbjct: 235 F-EKEHGVKLGFMSFFVKAAVHALKKFPLINASIDGNDIVYHGYFDI--GIAVGSPRGLV 291
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP++RN L++E+ GGTF+ISNGGVFGS+L TPIINP
Sbjct: 292 VPILRNADQMSLADIEKKIAEFGVKARDGKLSLEELTGGTFSISNGGVFGSMLSTPIINP 351
Query: 230 PQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRI 289
PQSAILG+H T +RPV GQ+V++PM Y+A++YDHR+IDGREAVL L +K A+EDP
Sbjct: 352 PQSAILGVHATKDRPVVEDGQIVIRPMNYLAMSYDHRIIDGREAVLGLVAMKDALEDPAR 411
Query: 290 ILAGL 294
+L L
Sbjct: 412 LLLDL 416
>sp|Q1RHI5|ODO2_RICBR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
bellii (strain RML369-C) GN=sucB PE=3 SV=1
Length = 400
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 142/246 (57%), Gaps = 47/246 (19%)
Query: 79 QRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDG 138
+RV+M+R+R+ IAQRLK++QN A+LTTFNEIDM K G ++ F E
Sbjct: 172 ERVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSK--------VIALRGKYKDEF-EKK 222
Query: 139 ATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPG--RELNSGPPECKP----SVAVATPKGL 192
VK G F ++ T+ KL P E++ K VAV T +GL
Sbjct: 223 HGVKLGFMSFFVRATI--------EALKLIPSVNAEIDGDDLVYKNYYDIGVAVGTEQGL 274
Query: 193 VVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIIN 228
VVPV+R+ L++ D GGTF+ISNGGV+GSLL TPIIN
Sbjct: 275 VVPVVRDADKMGFADIEKTIGGLAKKARDGKLSMADLSGGTFSISNGGVYGSLLSTPIIN 334
Query: 229 PPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
PPQS ILG+H T ER VAI G++ ++PMMY+AL+YDHR+IDG+EAV FL KIK +E P
Sbjct: 335 PPQSGILGLHKTEERVVAIDGKIEIRPMMYIALSYDHRIIDGKEAVSFLVKIKELIESPE 394
Query: 289 IILAGL 294
+L L
Sbjct: 395 KLLLNL 400
>sp|Q8GCY1|ODO2_BARVB Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
vinsonii subsp. berkhofii GN=sucB PE=3 SV=1
Length = 411
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 140/239 (58%), Gaps = 36/239 (15%)
Query: 78 EQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVED 137
E+RV+M ++RQ IA+RLK+AQN AMLTTFNE+DM + M + + E++
Sbjct: 182 EERVRMTKLRQTIARRLKDAQNTAAMLTTFNEVDM----SAVMGLRKRYKDLFEKKH--- 234
Query: 138 GATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVI 197
VK G F K VC + A G ++ +AV T KGLVVPV+
Sbjct: 235 --GVKLGFMGFFTKA-VCHALKELPAVNAEIDGTDIIY-KNYVNAGIAVGTDKGLVVPVV 290
Query: 198 RN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSA 233
R+ LA+ D GGTFTI+NGGV+GSL+ TPI+N PQS
Sbjct: 291 RDADQMSLAEIEKEIGRLGRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTPILNAPQSG 350
Query: 234 ILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDP-RIIL 291
ILGMH ER + + GQ+ ++PMMY+AL+YDHR++DG+EAV FL ++K ++EDP R++L
Sbjct: 351 ILGMHAIKERAMVVDGQIAIRPMMYLALSYDHRIVDGQEAVTFLVRVKESLEDPERLVL 409
>sp|Q6FYD4|ODO2_BARQU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
quintana (strain Toulouse) GN=sucB PE=3 SV=1
Length = 410
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 143/245 (58%), Gaps = 48/245 (19%)
Query: 78 EQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVED 137
E+RV+M ++RQ IA+RLK+AQN AMLTTFNE+DM + M + + E++
Sbjct: 181 EERVRMTKLRQTIARRLKDAQNTAAMLTTFNEVDM----SAVMDLRKRYKDLFEKKH--- 233
Query: 138 GATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGREL------NSGPPECKPSVAVATPKG 191
VK G F K VC ++ G ++ N+G +AV T KG
Sbjct: 234 --GVKLGFMGFFTK-AVCHALKEFPTVNAEIDGTDIVYKNYVNAG-------IAVGTDKG 283
Query: 192 LVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPII 227
LVVPV+R+ LA+ D GGTFTI+NGGV+GSL+ TPI+
Sbjct: 284 LVVPVVRDADQMSLAEIEKEISRLGRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTPIL 343
Query: 228 NPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDP 287
N PQS ILGMH ER + + GQ+++ PMMY+AL+YDHR++DG+EAV FL ++K ++EDP
Sbjct: 344 NAPQSGILGMHAIKERAMVVGGQIIICPMMYLALSYDHRIVDGQEAVTFLVRVKESLEDP 403
Query: 288 -RIIL 291
R++L
Sbjct: 404 ERLVL 408
>sp|Q8K9N2|ODO2_BUCAP Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=sucB PE=3 SV=1
Length = 393
Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 151/274 (55%), Gaps = 55/274 (20%)
Query: 51 SQLNAIEAATVKLPPADPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEI 110
+Q N IE KL + E E R+KM R+RQ+IA+RL E +N AMLTTFNE+
Sbjct: 140 NQENIIEE---KLNDQSFSNEKEKKIYENRIKMTRLRQKIAERLLETKNNTAMLTTFNEV 196
Query: 111 DMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPG 170
+M+ P+ + E F E V+ G F +K V + L+
Sbjct: 197 NMQ-------PIISLRKKYGE--FFEKKHGVRIGFMPFFVKAVV----------ESLKKF 237
Query: 171 RELNSGPPE--------CKPSVAVATPKGLVVPVIRN----------------------- 199
E+N+ + S+AV+TP+G++ PV+RN
Sbjct: 238 PEINASIDKNDIVYYKNIDVSIAVSTPRGVITPVLRNADNMSMADIEKKIKEFSIKGIEN 297
Query: 200 -LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMY 258
+ IE+ GG FTI+NGG+FGSL+ TPIINPPQSAILGMH ERP+AI G+V + PMMY
Sbjct: 298 KIKIEELIGGNFTITNGGIFGSLMSTPIINPPQSAILGMHLIKERPMAINGKVKILPMMY 357
Query: 259 VALTYDHRLIDGREAVLFLRKIKAAVED-PRIIL 291
+AL+YDHRLIDG+E+V FL IK +ED RII+
Sbjct: 358 LALSYDHRLIDGKESVSFLVTIKNILEDFNRIII 391
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 120 MPVPAPCNGIIEERFVEDGATVKAGQQL 147
+ V APCNGI+ E ++G+ VK+ Q L
Sbjct: 47 LEVSAPCNGILNEILEKEGSIVKSNQIL 74
>sp|P57389|ODO2_BUCAI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)
GN=sucB PE=3 SV=1
Length = 420
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 140/242 (57%), Gaps = 57/242 (23%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVED-- 137
RVKM R+RQRIA+RL +++N AMLTTF+E++M+ P+ ++ +++ ED
Sbjct: 193 RVKMTRLRQRIAERLLDSKNNTAMLTTFHEVNMK-------PII-----LLRKKYGEDFE 240
Query: 138 -GATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKP--------SVAVAT 188
V+ G F +K + + L+ E+N+ + S+A++T
Sbjct: 241 KKHNVRIGFMSFFVKAVI----------QALKNFPEINAYIDQTDIVFYKNFDISIAIST 290
Query: 189 PKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGT 224
P+GL+ PVIRN + I++ GG FTI+NGGVFGSL+ T
Sbjct: 291 PRGLITPVIRNADTMTMAEIEKKIKDFSIKGLQNKINIKELMGGNFTITNGGVFGSLMST 350
Query: 225 PIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAV 284
PIINPPQ+AILGMH ERPV + GQ+ + PMMY+AL+YDHRLIDG+E+V FL IK +
Sbjct: 351 PIINPPQTAILGMHVIQERPVVVNGQIKILPMMYLALSYDHRLIDGKESVGFLINIKNIL 410
Query: 285 ED 286
ED
Sbjct: 411 ED 412
>sp|Q89AJ6|ODO2_BUCBP Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=sucB PE=3 SV=1
Length = 410
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 136/249 (54%), Gaps = 52/249 (20%)
Query: 76 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFV 135
RS +RVKM R+R++I++RL +N A LTTFNE++M+ N E F
Sbjct: 179 RSIKRVKMTRLRKKISERLLSTKNNTASLTTFNEVNMQSILNLRRKYG--------ELFK 230
Query: 136 EDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPE--------CKPSVAVA 187
+ +K G F +K + + L+ E+N+ S+A++
Sbjct: 231 QKHG-IKLGLMSFYVKAVI----------EALKIFPEINASIDNDEIIYYNYFDISIAIS 279
Query: 188 TPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLG 223
TP+GLV PV++N L I+D GG FTI+NGGVFGSL
Sbjct: 280 TPRGLVTPVLKNADLMSMAEIEIKIKDFSEKGKNSKLTIDDLIGGNFTITNGGVFGSLFS 339
Query: 224 TPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAA 283
TP+INPPQSAILGMH +RPV + + V PMMY+AL+YDHRLIDG+E+V FL KIK
Sbjct: 340 TPLINPPQSAILGMHAIHKRPVIVDENIEVHPMMYLALSYDHRLIDGKESVGFLLKIKEF 399
Query: 284 VED-PRIIL 291
+ED RI+L
Sbjct: 400 LEDFSRIVL 408
>sp|Q4L6C3|ODO2_STAHJ Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=odhB PE=3 SV=1
Length = 423
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 148/290 (51%), Gaps = 53/290 (18%)
Query: 35 GRNLQKRSKYRQSQQPSQLNAIEAATVKLPPADPTKEISGTRSE--QRVKMNRMRQRIAQ 92
G ++ ++ SQ+ +Q + + + K P K+ SG ++ R KM+R ++ A+
Sbjct: 151 GNDVVRKDDVENSQKAAQSQSSQETSKKEEP----KKSSGAPNKPVIREKMSRRKKTAAK 206
Query: 93 RLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ERFVEDGATVKAGQQ 146
+L E N AMLTTFNE+DM ++E E+F++D K G
Sbjct: 207 KLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQFIKDHDGTKLGFM 252
Query: 147 LFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------- 199
F K V KY G ++ + VAV+T GL+VP +R+
Sbjct: 253 SFFTKAAVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLLVPFVRDCDKKNFA 310
Query: 200 -----------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFE 242
L ++D G+FTI+NGGVFGS++ TPIIN Q+AILGMH
Sbjct: 311 ELERAIADLAVKARDKKLGLDDMVNGSFTITNGGVFGSMMSTPIINGNQAAILGMHSIIT 370
Query: 243 RPVAI-KGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIIL 291
RP+AI K + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E P +L
Sbjct: 371 RPIAIDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIESPEDLL 420
>sp|Q49XM4|ODO2_STAS1 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=odhB PE=3 SV=1
Length = 424
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 127/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDM------RKESNTSMPVPAPCNGIIEER 133
R KM+R ++ A++L E N AMLTTFNEIDM RK +E+
Sbjct: 195 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEIDMTNVMDLRKRK--------------KEQ 240
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K V KY G ++ + VAV+T GL+
Sbjct: 241 FIKDHDGTKLGFMSFFTKAAVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTEDGLL 298
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 299 VPFVRDCDKKNFAEIEDEIGNLAKKARDKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 358
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 359 SQAAILGMHSIITRPIAIDADTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 418
Query: 289 IIL 291
+L
Sbjct: 419 DLL 421
>sp|Q6GGZ6|ODO2_STAAR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MRSA252) GN=odhB PE=3 SV=1
Length = 423
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 194 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 239
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 240 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 297
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 298 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 357
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 358 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 417
Query: 289 IIL 291
+L
Sbjct: 418 DLL 420
>sp|Q8CSL9|ODO2_STAES Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=odhB PE=3 SV=1
Length = 420
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 128/237 (54%), Gaps = 35/237 (14%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGA 139
R KM+R ++ A++L E N AMLTTFNE+DM M + +E+F++D
Sbjct: 191 REKMSRRKKTAAKKLLEVSNQTAMLTTFNEVDM----TNVMDLRKRK----KEQFIKDHD 242
Query: 140 TVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN 199
K G F K V KY G ++ + +AV+T GL+VP +R+
Sbjct: 243 GTKLGFMSFFTKAAVAAL-KKYPEVNAEIDGDDMIT-KQFYDIGIAVSTDDGLLVPFVRD 300
Query: 200 ------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAIL 235
L ++D G+FTI+NGG+FGS++ TPIIN Q+AIL
Sbjct: 301 CDKKNFAEIEQEIANLAVKARDKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAAIL 360
Query: 236 GMHGTFERPVAI-KGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIIL 291
GMH RP+A+ K + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P +L
Sbjct: 361 GMHSIITRPIAVDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLL 417
>sp|Q5HPC7|ODO2_STAEQ Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=odhB PE=3
SV=1
Length = 420
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 128/237 (54%), Gaps = 35/237 (14%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGA 139
R KM+R ++ A++L E N AMLTTFNE+DM M + +E+F++D
Sbjct: 191 REKMSRRKKTAAKKLLEVSNQTAMLTTFNEVDM----TNVMDLRKRK----KEQFIKDHD 242
Query: 140 TVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN 199
K G F K V KY G ++ + +AV+T GL+VP +R+
Sbjct: 243 GTKLGFMSFFTKAAVAAL-KKYPEVNAEIDGDDMIT-KQFYDIGIAVSTDDGLLVPFVRD 300
Query: 200 ------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAIL 235
L ++D G+FTI+NGG+FGS++ TPIIN Q+AIL
Sbjct: 301 CDKKNFAEIEQEIANLAVKARDKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAAIL 360
Query: 236 GMHGTFERPVAI-KGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIIL 291
GMH RP+A+ K + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P +L
Sbjct: 361 GMHSIITRPIAVDKDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLL 417
>sp|Q8NWR7|ODO2_STAAW Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MW2) GN=odhB PE=3 SV=1
Length = 422
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 238
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 239 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 296
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 297 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 356
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 357 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 416
Query: 289 IIL 291
+L
Sbjct: 417 DLL 419
>sp|Q6G9E9|ODO2_STAAS Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain MSSA476) GN=odhB PE=3 SV=1
Length = 422
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 238
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 239 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 296
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 297 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 356
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 357 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 416
Query: 289 IIL 291
+L
Sbjct: 417 DLL 419
>sp|Q5HG07|ODO2_STAAC Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain COL) GN=odhB PE=3 SV=1
Length = 422
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 238
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 239 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 296
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 297 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 356
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 357 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 416
Query: 289 IIL 291
+L
Sbjct: 417 DLL 419
>sp|Q2FYM2|ODO2_STAA8 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain NCTC 8325) GN=odhB PE=3 SV=1
Length = 422
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 238
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 239 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 296
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 297 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 356
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 357 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 416
Query: 289 IIL 291
+L
Sbjct: 417 DLL 419
>sp|Q2FH26|ODO2_STAA3 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain USA300) GN=odhB PE=3 SV=1
Length = 422
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 238
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 239 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 296
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 297 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 356
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 357 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 416
Query: 289 IIL 291
+L
Sbjct: 417 DLL 419
>sp|Q7A5N4|ODO2_STAAN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain N315) GN=odhB PE=1 SV=1
Length = 422
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 238
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 239 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 296
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 297 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 356
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 357 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 416
Query: 289 IIL 291
+L
Sbjct: 417 DLL 419
>sp|Q99U75|ODO2_STAAM Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=odhB PE=1 SV=1
Length = 422
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 238
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 239 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 296
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 297 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 356
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 357 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 416
Query: 289 IIL 291
+L
Sbjct: 417 DLL 419
>sp|Q2YY06|ODO2_STAAB Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=odhB PE=3 SV=1
Length = 422
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 80 RVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE------ER 133
R KM+R ++ A++L E N AMLTTFNE+DM ++E E+
Sbjct: 193 REKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDM--------------TNVMELRKRKKEQ 238
Query: 134 FVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLV 193
F++D K G F K +V KY G ++ + VAV+T GL+
Sbjct: 239 FMKDHDGTKLGFMSFFTKASVAAL-KKYPEVNAEIDGDDMIT-KQYYDIGVAVSTDDGLL 296
Query: 194 VPVIRN------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINP 229
VP +R+ L ++D G+FTI+NGG+FGS++ TPIIN
Sbjct: 297 VPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIING 356
Query: 230 PQSAILGMHGTFERPVAIKGQVVV-KPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288
Q+AILGMH RP+AI + +PMMY+AL+YDHR+IDG+EAV FL+ IK +E+P
Sbjct: 357 NQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPE 416
Query: 289 IIL 291
+L
Sbjct: 417 DLL 419
>sp|P16263|ODO2_BACSU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bacillus
subtilis (strain 168) GN=odhB PE=3 SV=2
Length = 417
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 123/235 (52%), Gaps = 36/235 (15%)
Query: 82 KMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATV 141
KM+R RQ IA+RL E Q +AMLTTFNE+DM N +++F E V
Sbjct: 191 KMSRRRQTIAKRLVEVQQTSAMLTTFNEVDMTAVMN--------LRKRRKDQFFEQN-EV 241
Query: 142 KAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN-- 199
K G F K V KY G EL +AVA +GLVVPV+R+
Sbjct: 242 KLGFMSFFTKAVVAALK-KYPLLNAEIQGDELIV-KKFYDIGIAVAADEGLVVPVVRDAD 299
Query: 200 ----------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGM 237
L + + GG+FTI+NGG FGSL+ TPI+N PQ ILGM
Sbjct: 300 RLTFAGIEKEIGELAKKARNNKLTLSELQGGSFTITNGGTFGSLMSTPILNSPQVGILGM 359
Query: 238 HGTFERPVAIKGQ-VVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIIL 291
H RPVAI + +PMMY+AL+YDHR++DG+EAV FL IK +EDP +L
Sbjct: 360 HKIQLRPVAIDEERFENRPMMYIALSYDHRIVDGKEAVGFLVTIKNLLEDPEQLL 414
>sp|Q8NNJ2|ODP2_CORGL Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=aceF PE=1 SV=1
Length = 675
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 113/238 (47%), Gaps = 49/238 (20%)
Query: 82 KMNRMRQRIAQRLKEAQNVNAMLTTFNEIDM------RKESNTSMPVPAPCNGIIEERFV 135
K+NR+R+ A + EA ++A LT +E+DM RK++ + N FV
Sbjct: 443 KVNRIREITAMKTVEALQISAQLTQLHEVDMTRVAELRKKNKPAFIEKHGVNLTYLPFFV 502
Query: 136 EDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVP 195
KA + P V N+ + A+ K E+ S+AV TP GL+ P
Sbjct: 503 ------KAVVEALVSHPNV---NASFNAKTK-----EMTY-HSSVNLSIAVDTPAGLLTP 547
Query: 196 VI---RNLAI---------------------EDSDGGTFTISNGGVFGSLLGTPIINPPQ 231
VI ++L+I D GGTFTI+N G G+L TPI+ PPQ
Sbjct: 548 VIHDAQDLSIPEIAKAIVDLADRSRNNKLKPNDLSGGTFTITNIGSEGALSDTPILVPPQ 607
Query: 232 SAILGMHGTFERPVAIK----GQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVE 285
+ ILG +RPV I + ++ M+++ LTYDH+++DG +A FL IK +E
Sbjct: 608 AGILGTGAIVKRPVVITEDGIDSIAIRQMVFLPLTYDHQVVDGADAGRFLTTIKDRLE 665
>sp|P09062|ODB2_PSEPU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas putida GN=bkdB
PE=3 SV=1
Length = 423
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%), Gaps = 51/249 (20%)
Query: 75 TRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEID------MRKESNTSMPVPAPCNG 128
T SEQ V + +R++IAQR+++A+ A + EID +R++ N+ +G
Sbjct: 192 TDSEQ-VPVIGLRRKIAQRMQDAKRRVAHFSYVEEIDVTALEALRQQLNSK-------HG 243
Query: 129 IIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKL--RPGRELNSGPPECKPSVAV 186
+ V+A + P + N+ Y E ++ R G +A
Sbjct: 244 DSRGKLTLLPFLVRALVVALRDFPQI---NATYDDEAQIITRHG--------AVHVGIAT 292
Query: 187 ATPKGLVVPVIRNLAI------------------------EDSDGGTFTISNGGVFGSLL 222
GL+VPV+R+ E+ G T T+++ G G ++
Sbjct: 293 QGDNGLMVPVLRHAEAGSLWANAGEISRLANAARNNKASREELSGSTITLTSLGALGGIV 352
Query: 223 GTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKA 282
TP++N P+ AI+G++ ERPV I GQ+VV+ MM ++ ++DHR++DG +A LF++ ++
Sbjct: 353 STPVVNTPEVAIVGVNRMVERPVVIDGQIVVRKMMNLSSSFDHRVVDGMDAALFIQAVRG 412
Query: 283 AVEDPRIIL 291
+E P +
Sbjct: 413 LLEQPACLF 421
>sp|Q19749|ODP2_CAEEL Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Caenorhabditis
elegans GN=F23B12.5 PE=1 SV=1
Length = 507
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 43/253 (16%)
Query: 69 TKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNG 128
T+ +SG + + ++ MR+ IA+RL E+++ +EI + +T + V NG
Sbjct: 267 TQAVSG-QDYTDIPLSNMRKTIAKRLTESKSTIPHYYLTSEIQL----DTLLQVREKLNG 321
Query: 129 IIEERFVEDGATVKAGQQLFKIKPTVC--TPNS-KYRAEKKLRPGRELNSGPPECKPSVA 185
++ + + + K C P + Y + +R ++ SVA
Sbjct: 322 LLAKGTSGQATKISINDFIIKASALACQRVPEANSYWMDSFIRENHHVDV-------SVA 374
Query: 186 VATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVFGSL 221
V+TP GL+ P+I N L + GGTFT+SN G+FGS+
Sbjct: 375 VSTPAGLITPIIFNAHAKGLATIASEIVELAQRAREGKLQPHEFQGGTFTVSNLGMFGSV 434
Query: 222 LG-TPIINPPQSAILGMHGTFER--PVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLR 278
T IINPPQS IL + G ++ P +G +K M V L+ DHR +DG ++LR
Sbjct: 435 SDFTAIINPPQSCILAIGGASDKLVPDEAEGYKKIK-TMKVTLSCDHRTVDGAVGAVWLR 493
Query: 279 KIKAAVEDPRIIL 291
K +E P +L
Sbjct: 494 HFKEFLEKPHTML 506
>sp|O31550|ACOC_BACSU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Bacillus subtilis (strain 168)
GN=acoC PE=3 SV=1
Length = 398
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 36/249 (14%)
Query: 67 DPTKEISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPC 126
D K +S ++ Q + + MR+ IA R++E+ +A LT + D+ K + +
Sbjct: 161 DQAKPVSEQKA-QEIPVTGMRKVIAARMQESLANSAQLTITMKADITKLATLQKQLSPTA 219
Query: 127 NGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAV 186
+ +A + P + NS Y+ E+ + P +AV
Sbjct: 220 EERYGTKLTITHFVSRAAVLALQAHPVL---NSFYQNERIITH--------PHVHLGMAV 268
Query: 187 ATPKGLVVPVIRN---LAI---------------------EDSDGGTFTISNGGVFGSLL 222
A GLVVPVIR+ L++ E+ G TF+I+N G FG
Sbjct: 269 ALENGLVVPVIRHAEKLSLIELAQSISENAKKAREGRAGSEELQGSTFSITNLGAFGVEH 328
Query: 223 GTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKA 282
TPI+NPP++ ILG+ +++ PV ++V ++ ++LT+DHR DG A FL+ +K
Sbjct: 329 FTPILNPPETGILGIGASYDTPVYQGEEIVRSTILPLSLTFDHRACDGAPAAAFLKAMKT 388
Query: 283 AVEDPRIIL 291
+E+P ++
Sbjct: 389 YLEEPAALI 397
>sp|P65633|ODP2_MYCTU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Mycobacterium tuberculosis
GN=dlaT PE=1 SV=1
Length = 553
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 110/241 (45%), Gaps = 52/241 (21%)
Query: 82 KMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATV 141
K +R+RQ A + +E+ A LT +E+DM K + + A ER +G +
Sbjct: 320 KASRIRQITANKTRESLQATAQLTQTHEVDMTK----IVGLRARAKAAFAER---EGVNL 372
Query: 142 -------KAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVV 194
KA KI P + N+ Y + K E+ E AV T +GL+
Sbjct: 373 TFLPFFAKAVIDALKIHPNI---NASYNEDTK-----EITYYDAE-HLGFAVDTEQGLLS 423
Query: 195 PVIR------------------------NLAIEDSDGGTFTISNGGVFGSLLGTPIINPP 230
PVI NL ++ GGTFTI+N G G+L TPI+ PP
Sbjct: 424 PVIHDAGDLSLAGLARAIADIAARARSGNLKPDELSGGTFTITNIGSQGALFDTPILVPP 483
Query: 231 QSAILGMHGTFERP---VAIKG--QVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVE 285
Q+A+LG +RP V G + V+ + Y+ LTYDHRLIDG +A FL IK +E
Sbjct: 484 QAAMLGTGAIVKRPRVVVDASGNESIGVRSVCYLPLTYDHRLIDGADAGRFLTTIKHRLE 543
Query: 286 D 286
+
Sbjct: 544 E 544
>sp|P65634|ODP2_MYCBO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=dlaT PE=3 SV=1
Length = 553
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 110/241 (45%), Gaps = 52/241 (21%)
Query: 82 KMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATV 141
K +R+RQ A + +E+ A LT +E+DM K + + A ER +G +
Sbjct: 320 KASRIRQITANKTRESLQATAQLTQTHEVDMTK----IVGLRARAKAAFAER---EGVNL 372
Query: 142 -------KAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVV 194
KA KI P + N+ Y + K E+ E AV T +GL+
Sbjct: 373 TFLPFFAKAVIDALKIHPNI---NASYNEDTK-----EITYYDAE-HLGFAVDTEQGLLS 423
Query: 195 PVIR------------------------NLAIEDSDGGTFTISNGGVFGSLLGTPIINPP 230
PVI NL ++ GGTFTI+N G G+L TPI+ PP
Sbjct: 424 PVIHDAGDLSLAGLARAIADIAARARSGNLKPDELSGGTFTITNIGSQGALFDTPILVPP 483
Query: 231 QSAILGMHGTFERP---VAIKG--QVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVE 285
Q+A+LG +RP V G + V+ + Y+ LTYDHRLIDG +A FL IK +E
Sbjct: 484 QAAMLGTGAIVKRPRVVVDASGNESIGVRSVCYLPLTYDHRLIDGADAGRFLTTIKHRLE 543
Query: 286 D 286
+
Sbjct: 544 E 544
>sp|O59816|ODP2_SCHPO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=lat1 PE=3 SV=1
Length = 483
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 48/240 (20%)
Query: 83 MNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERF---VEDGA 139
++ MR+ IA RL E++N+N ++M K + + A N + + R+ V D
Sbjct: 260 LSNMRKIIASRLAESKNMNPHYYVTVSVNMEK----IIRLRAALNAMADGRYKLSVND-L 314
Query: 140 TVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN 199
+KA + P V N+ + + +R + ++ S+AVATP GL+ PVIRN
Sbjct: 315 VIKATTAALRQVPEV---NAAWMGDF-IRQYKNVDI-------SMAVATPSGLITPVIRN 363
Query: 200 ------------------------LAIEDSDGGTFTISNGGVFGSLLGTPIINPPQSAIL 235
L E+ GGTFTISN G+F T IINPPQ+ IL
Sbjct: 364 THALGLAEISTLAKDYGQRARNNKLKPEEYQGGTFTISNLGMFPVDQFTAIINPPQACIL 423
Query: 236 GMHGTFERPV----AIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIIL 291
+ T + V + KG V P+M L+ DHR++DG A F +K +E+P I+
Sbjct: 424 AVGTTVDTVVPDSTSEKG-FKVAPIMKCTLSSDHRVVDGAMAARFTTALKKILENPLEIM 482
>sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia bellii (strain
RML369-C) GN=pdhC PE=3 SV=1
Length = 418
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
Query: 183 SVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGGVF 218
SVAVA GLV P+IRN L E+ GG FTISN G++
Sbjct: 282 SVAVAIENGLVTPIIRNADQKNIVDLSSEMKGLIKKARENKLTPEEFQGGGFTISNLGMY 341
Query: 219 GSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLR 278
G IINPPQS I+G+ + +R + Q+ + +M V L+ DHR++DG FL
Sbjct: 342 GIKNFNAIINPPQSCIMGVGSSSKRAIVKNDQISIATIMDVTLSADHRVVDGAVGAEFLA 401
Query: 279 KIKAAVEDPRIIL 291
K +E P ++L
Sbjct: 402 AFKRFIESPALML 414
>sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=pdhC PE=3
SV=2
Length = 440
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 52/262 (19%)
Query: 65 PADPTKEISGTRSEQ----RVKMNRMRQRIAQRLKEA-QNV-NAMLTTFNEID----MRK 114
P+ T E SG + +K++ MR+ IA+RL E+ QN+ + LT ++D +R
Sbjct: 196 PSVSTPEASGKITHDTPHNSIKLSNMRRVIARRLTESKQNIPHIYLTVDVQMDALLKLRS 255
Query: 115 ESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELN 174
E N S+ V + + +KA K P V N + ++ L+
Sbjct: 256 ELNESLAVQ-------NIKISVNDMLIKAQALALKATPNV---NVAFDGDQMLQFS---- 301
Query: 175 SGPPECKPSVAVATPKGLVVPVIRN--------LAIE----------------DSDGGTF 210
+ SVAV+ GL+ P+++ L++E + GGT
Sbjct: 302 ----QADISVAVSVEGGLITPILKQADTKSLSALSVEMKELIARAREGRLQPQEYQGGTS 357
Query: 211 TISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDG 270
+ISN G+FG +INPPQ++IL + RP I + + + + ++DHR+IDG
Sbjct: 358 SISNMGMFGIKQFNAVINPPQASILAIGSGERRPWVIDDAITIATVATITGSFDHRVIDG 417
Query: 271 REAVLFLRKIKAAVEDPRIILA 292
+A F+ K VE P ILA
Sbjct: 418 ADAAAFMSAFKHLVEKPLGILA 439
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,109,567
Number of Sequences: 539616
Number of extensions: 4588221
Number of successful extensions: 13359
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 12959
Number of HSP's gapped (non-prelim): 300
length of query: 294
length of database: 191,569,459
effective HSP length: 116
effective length of query: 178
effective length of database: 128,974,003
effective search space: 22957372534
effective search space used: 22957372534
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)