Query psy7777
Match_columns 294
No_of_seqs 211 out of 1252
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 18:37:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7777.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7777hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mae_A 2-oxoisovalerate dehydr 100.0 3.6E-60 1.2E-64 435.5 11.9 209 71-294 11-247 (256)
2 1scz_A E2, dihydrolipoamide su 100.0 6.8E-60 2.3E-64 428.2 13.3 202 78-294 4-233 (233)
3 1dpb_A Dihydrolipoyl-transacet 100.0 7.8E-59 2.7E-63 423.7 17.2 204 76-292 13-243 (243)
4 3l60_A Branched-chain alpha-ke 100.0 2.8E-58 9.6E-63 421.6 20.8 205 77-294 14-242 (250)
5 2ii3_A Lipoamide acyltransfera 100.0 2E-58 6.8E-63 425.2 15.9 206 75-294 28-261 (262)
6 3dva_I Dihydrolipoyllysine-res 100.0 3.3E-60 1.1E-64 463.8 0.4 261 18-294 127-428 (428)
7 3b8k_A PDCE2;, dihydrolipoylly 100.0 1.3E-57 4.4E-62 414.5 9.3 201 77-292 11-239 (239)
8 3rqc_A Probable lipoamide acyl 100.0 6.5E-57 2.2E-61 406.5 10.5 197 76-294 4-224 (224)
9 2xt6_A 2-oxoglutarate decarbox 100.0 3E-43 1E-47 376.0 4.2 185 93-290 1-225 (1113)
10 1q23_A Chloramphenicol acetylt 100.0 3.6E-40 1.2E-44 296.2 16.0 165 87-287 18-215 (219)
11 3cla_A Type III chloramphenico 100.0 3.5E-39 1.2E-43 288.6 17.9 168 87-286 13-210 (213)
12 2i9d_A Chloramphenicol acetylt 100.0 3.3E-37 1.1E-41 276.7 13.3 157 99-284 25-216 (217)
13 2rkv_A Trichothecene 3-O-acety 64.2 5.8 0.0002 37.4 4.3 30 257-286 148-177 (451)
14 2e1v_A Acyl transferase; BAHD 64.0 6.3 0.00021 37.4 4.5 29 257-285 162-190 (454)
15 2bgh_A Vinorine synthase; VS, 63.8 6 0.00021 37.2 4.3 29 257-285 152-180 (421)
16 2xr7_A Malonyltransferase; xen 63.0 5.9 0.0002 37.5 4.1 29 257-285 157-185 (453)
17 4g22_A Hydroxycinnamoyl-COA sh 60.9 7.4 0.00025 36.8 4.4 29 257-285 150-178 (439)
18 3rnm_E Lipoamide acyltransfera 39.4 7.2 0.00024 27.2 0.3 24 17-41 5-28 (58)
19 1bal_A Dihydrolipoamide succin 38.6 12 0.00042 24.9 1.4 26 15-41 5-30 (51)
20 1q9j_A PAPA5, polyketide synth 35.4 30 0.001 31.3 4.0 28 258-285 117-144 (422)
21 1l5a_A Amide synthase, VIBH; n 29.1 42 0.0014 30.5 3.9 29 257-285 118-146 (436)
22 2eq9_C Pyruvate dehydrogenase 29.0 14 0.00047 23.2 0.3 20 20-40 1-20 (41)
23 1w4i_A Pyruvate dehydrogenase 28.4 12 0.0004 26.2 -0.1 22 19-41 4-25 (62)
24 2jgp_A Tyrocidine synthetase 3 24.3 64 0.0022 30.3 4.3 30 257-286 214-243 (520)
25 4hvm_A Tlmii; PSI-biology, mid 23.1 61 0.0021 30.2 3.8 28 257-284 134-161 (493)
26 1w85_I Dihydrolipoyllysine-res 21.6 22 0.00075 23.3 0.2 23 18-41 5-27 (49)
27 2xhg_A Tyrocidine synthetase A 20.5 79 0.0027 28.9 4.0 27 259-285 141-167 (466)
No 1
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00 E-value=3.6e-60 Score=435.49 Aligned_cols=209 Identities=30% Similarity=0.424 Sum_probs=184.5
Q ss_pred cCCCCCcceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh----hccccCceehhHHH
Q psy7777 71 EISGTRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE----RFVEDGATVKAGQQ 146 (294)
Q Consensus 71 ~~~~~~~~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~----~~~~~~~~ikAva~ 146 (294)
..+..+.++++|+++|||+||++|.+||+++||||++.+||+|+|.++ |+++|...++ +++..++++||+++
T Consensus 11 ~~~~~~~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~----r~~~k~~~~~~~g~kls~~~~iikAva~ 86 (256)
T 3mae_A 11 PVRSAAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRY----RNAVKDSFKKEEGYSLTYFAFFIKAVAQ 86 (256)
T ss_dssp ----CCSCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHH----HHHHHHHHHHHHSSCCCHHHHHHHHHHH
T ss_pred CCcCCCCceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHH----HHHHHhhhhhhcCCCccHHHHHHHHHHH
Confidence 344556788999999999999999999999999999999999997653 2222211110 11222579999999
Q ss_pred hhhcCCccccCCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCC
Q psy7777 147 LFKIKPTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAI 202 (294)
Q Consensus 147 Al~~~P~l~~~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~ 202 (294)
||++||+| |++|+ +++|++ ++++|||+||++++||++|||+| |.+
T Consensus 87 AL~~~P~~---Na~~~-------~~~i~~-~~~vnigiAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~ 155 (256)
T 3mae_A 87 ALKEFPQL---NSTWA-------GDKIIE-HANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQ 155 (256)
T ss_dssp HHHHCTTT---SEEEE-------TTEEEE-CSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCH
T ss_pred HHHhCHHh---hhEEe-------cCEEEE-cCcEEEEeEEEcCCceEEEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999 99999 789999 99999999999999999999988 899
Q ss_pred CCCCCCeeEEeecCCCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHH
Q psy7777 203 EDSDGGTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKA 282 (294)
Q Consensus 203 ~d~~ggTftISNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~ 282 (294)
+|++||||||||+||||+++|+|||||||+||||+|+++++||+.+|+++++++|+||||||||||||+++|+||++|++
T Consensus 156 ~e~~ggTftISNlG~~G~~~ftpIInppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~ 235 (256)
T 3mae_A 156 ADMEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKA 235 (256)
T ss_dssp HHHSCCSEEEECGGGGTCSEEECCCCTTSSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred hhcCCCEEEEecCCCCCccceEcccCCCCceEEEecccEEEEEEECCEEEEeEEEEEEEEEccccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCHHHhhcCC
Q psy7777 283 AVEDPRIILAGL 294 (294)
Q Consensus 283 ~Le~P~~lll~~ 294 (294)
+||+|+.|...|
T Consensus 236 ~Le~P~~~~~~~ 247 (256)
T 3mae_A 236 NVEKISKENTAL 247 (256)
T ss_dssp HHHTCCTTTCCC
T ss_pred HHhChHHHHHHH
Confidence 999999876543
No 2
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00 E-value=6.8e-60 Score=428.25 Aligned_cols=202 Identities=52% Similarity=0.795 Sum_probs=182.5
Q ss_pred ceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh----hccccCceehhHHHhhhcCCc
Q psy7777 78 EQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE----RFVEDGATVKAGQQLFKIKPT 153 (294)
Q Consensus 78 ~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~----~~~~~~~~ikAva~Al~~~P~ 153 (294)
++++|+++|||+||++|++||+++||||++.++|+|+|.++ |+++|....+ +++..++++||+++||++||+
T Consensus 4 ~~~~~~~~~r~~ia~~m~~S~~~~P~~~~~~evdvt~l~~~----r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~ 79 (233)
T 1scz_A 4 EKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDL----RKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPE 79 (233)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHH----HHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTT
T ss_pred ceeccCCHHHHHHHHHHHHhccCCCEEEEEEEEEcHHHHHH----HHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChH
Confidence 46789999999999999999999999999999999997653 2222211110 112235799999999999999
Q ss_pred cccCCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCCCe
Q psy7777 154 VCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGT 209 (294)
Q Consensus 154 l~~~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~ggT 209 (294)
| |++|+ +++|++ ++++|||+||++++||++|||+| |+++|++|||
T Consensus 80 ~---Na~~~-------~~~i~~-~~~v~igiAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggt 148 (233)
T 1scz_A 80 V---NASID-------GDDVVY-HNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGN 148 (233)
T ss_dssp T---TCEEE-------TTEEEC-CSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCS
T ss_pred h---hEEEe-------CCEEEE-eCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCE
Confidence 9 99999 789999 99999999999999999999997 8899999999
Q ss_pred eEEeecCCCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCHHH
Q psy7777 210 FTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRI 289 (294)
Q Consensus 210 ftISNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~ 289 (294)
|||||+||||+++|+|||||||+|||++|+++++|++.||+++++++|+||||||||+|||+++|+||+.|+++||+|..
T Consensus 149 ftISnlG~~G~~~~tpIin~pq~aIl~vG~~~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ 228 (233)
T 1scz_A 149 FTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTR 228 (233)
T ss_dssp EEEEEGGGGTCCCCCCCCCTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCTTH
T ss_pred EEEEeCCCCCccceEcccCCCCcEEEEccccEEEEEEECCEEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCC
Q psy7777 290 ILAGL 294 (294)
Q Consensus 290 lll~~ 294 (294)
||++|
T Consensus 229 ll~~~ 233 (233)
T 1scz_A 229 LLLDV 233 (233)
T ss_dssp HHHTC
T ss_pred HhhcC
Confidence 98875
No 3
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00 E-value=7.8e-59 Score=423.66 Aligned_cols=204 Identities=31% Similarity=0.394 Sum_probs=182.2
Q ss_pred CcceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh---hccccCceehhHHHhhhcCC
Q psy7777 76 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE---RFVEDGATVKAGQQLFKIKP 152 (294)
Q Consensus 76 ~~~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~---~~~~~~~~ikAva~Al~~~P 152 (294)
+.++++|+++|||.||++|.+||+++||||++.+||+|+|.++ |+++|...++ +++..++++||+++||++||
T Consensus 13 ~~~~~~~~~~~rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~----r~~~k~~~~~~g~kls~~~~~ikA~~~Al~~~P 88 (243)
T 1dpb_A 13 GEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAF----RVAQKAVAEKAGVKLTVLPLLLKACAYLLKELP 88 (243)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHH----HHHTHHHHHHTTCCCCSHHHHHHHHHHHHHHSG
T ss_pred CCceEeeCcHHHHHHHHHHHHhCcCCCeEEEEEEEEhHHHHHH----HHHHhhhhhhccCCCChHHHHHHHHHHHHHhCh
Confidence 4567889999999999999999999999999999999997653 2222211110 11222579999999999999
Q ss_pred ccccCCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCCC
Q psy7777 153 TVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGG 208 (294)
Q Consensus 153 ~l~~~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~gg 208 (294)
+| |++|+ +++++|++ ++++|||+||++++||++|||+| |+++|++||
T Consensus 89 ~~---Na~~~-----~~~~~i~~-~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~gg 159 (243)
T 1dpb_A 89 DF---NSSLA-----PSGQALIR-KKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGA 159 (243)
T ss_dssp GG---GEEEC-----TTSSCEEE-CSSCCEEECEEETTEEECCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCGGGGSCC
T ss_pred Hh---hEEEe-----cCCCeEEE-eCceeEEEEEECCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCC
Confidence 99 99998 22468999 99999999999999999999997 899999999
Q ss_pred eeEEeecCCCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCHH
Q psy7777 209 TFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288 (294)
Q Consensus 209 TftISNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~ 288 (294)
||||||+||+|+++|+|||||||+|||++|+++++||+.||+++++++|+||||||||+|||+++|+||++|+++||+|.
T Consensus 160 tftISnlG~~g~~~~tpIin~pq~aIl~vG~~~~~pv~~~g~i~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~ 239 (243)
T 1dpb_A 160 CFTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDCRVINGAAAARFTKRLGDLLADIR 239 (243)
T ss_dssp SEEEEECTTTCCSCCCCCCCTTSSEEEEECCCEEEEEECSSSEEEEEEEEEEEEEETTTSCHHHHHHHHHHHHHHHHCGG
T ss_pred EEEEEcCCCCCccceECccCCCCCeEEEccccEEEEEEECCeEEEEEEEEEEEEECcccccHHHHHHHHHHHHHHHhCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy7777 289 IILA 292 (294)
Q Consensus 289 ~lll 292 (294)
.||+
T Consensus 240 ~ll~ 243 (243)
T 1dpb_A 240 AILL 243 (243)
T ss_dssp GGGC
T ss_pred hhhC
Confidence 8875
No 4
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=100.00 E-value=2.8e-58 Score=421.64 Aligned_cols=205 Identities=25% Similarity=0.405 Sum_probs=181.4
Q ss_pred cceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhhhccccCceehhHHHhhhcCCcccc
Q psy7777 77 SEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVCT 156 (294)
Q Consensus 77 ~~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~~~~~~~~~ikAva~Al~~~P~l~~ 156 (294)
.+++ |+++|||+||++|++|++++||||++.+||+|+|.+++. ++|.- ..+++..++++||+++||++||+|
T Consensus 14 ~~~r-pls~~rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~r~----~~k~~-~~kls~~~~iikAva~AL~~~P~~-- 85 (250)
T 3l60_A 14 PDVR-PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRD----RFVSA-APEITPFALTLRLLVIALKHNVIL-- 85 (250)
T ss_dssp CCCC-CCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHH----HHTTT-CTTCCHHHHHHHHHHHHHHHCGGG--
T ss_pred CCCC-CCcHHHHHHHHHHHHHhhcCCeEEEEEEEEHHHHHHHHH----HHhhc-CCCCCHHHHHHHHHHHHHHhCHHh--
Confidence 3455 999999999999999999999999999999999755311 11100 001222357999999999999999
Q ss_pred CCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCCCeeEE
Q psy7777 157 PNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTI 212 (294)
Q Consensus 157 ~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~ggTftI 212 (294)
|++|+++ .++++|++ ++++|||+||++++||++|||+| |.++|++||||||
T Consensus 86 -Na~~~~~---~~~~~i~~-~~~vnigvAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftI 160 (250)
T 3l60_A 86 -NSTWVDS---GEGPQVHV-HRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTV 160 (250)
T ss_dssp -SEEEECT---TTSCEEEE-CSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEE
T ss_pred -hEEEecc---CCCCeEEE-cCceeEEEEEEcCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCChhhcCCCEEEE
Confidence 9999821 11469999 99999999999999999999998 9999999999999
Q ss_pred eecCCCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCHHHhhc
Q psy7777 213 SNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILA 292 (294)
Q Consensus 213 SNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~lll 292 (294)
||+||||+++|||||||||+|||++|+++++||+.+|+++++++|+||||||||||||+++|+||++|+++||+|+.|+.
T Consensus 161 SNlG~~G~~~ftpIinppq~aIL~vG~i~~~pv~~~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~l~~ 240 (250)
T 3l60_A 161 SNFGALGVDDGVPVINHPEAAILGLGAIKPRPVVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETALL 240 (250)
T ss_dssp ECGGGGTCSSCCCCCCTTCSEEEEECCCEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHTT
T ss_pred EcCCCCCcceeEeeeCCCCceEEEecceEEEeEEECCEEEEEEEeEEEEEecccccCHHHHHHHHHHHHHHHhCHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC
Q psy7777 293 GL 294 (294)
Q Consensus 293 ~~ 294 (294)
+|
T Consensus 241 ~~ 242 (250)
T 3l60_A 241 DL 242 (250)
T ss_dssp TC
T ss_pred cc
Confidence 65
No 5
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=2e-58 Score=425.25 Aligned_cols=206 Identities=24% Similarity=0.333 Sum_probs=182.6
Q ss_pred CCcceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh---hccccCceehhHHHhhhcC
Q psy7777 75 TRSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE---RFVEDGATVKAGQQLFKIK 151 (294)
Q Consensus 75 ~~~~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~---~~~~~~~~ikAva~Al~~~ 151 (294)
++.++++|+++|||+||++|.+|+ ++||||++.+||+|+|.++ |+++|...++ +++..++++||+++||++|
T Consensus 28 ~~~~~~~p~~~~rk~ia~~m~~S~-~~P~~~~~~evDvt~l~~~----r~~~k~~~~~~g~kls~~~~~ikAva~Al~~~ 102 (262)
T 2ii3_A 28 IGKDRTEPVKGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKL----REELKPIAFARGIKLSFMPFFLKAASLGLLQF 102 (262)
T ss_dssp -CCCEEEECCGGGHHHHHHHHHGG-GSCEEEEEEEEECHHHHHH----HHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHC
T ss_pred CCCcceecCCHHHHHHHHHHHHhh-hCCeEEEEEEEEhHHHHHH----HHHHhhhhhhccCCccHHHHHHHHHHHHHHhC
Confidence 456789999999999999999998 6999999999999997653 2222211110 1222357999999999999
Q ss_pred CccccCCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCC
Q psy7777 152 PTVCTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDG 207 (294)
Q Consensus 152 P~l~~~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~g 207 (294)
|+| |++|+ +++++|++ ++++|||+||++++||++|||+| |+++|++|
T Consensus 103 P~~---Na~~~-----~~~~~i~~-~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~g 173 (262)
T 2ii3_A 103 PIL---NASVD-----ENCQNITY-KASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIG 173 (262)
T ss_dssp GGG---SEEEC-----TTSCEEEE-CSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSC
T ss_pred hHh---hEEEe-----CCCCEEEE-ecccceEEEEEcCCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 999 99998 23468999 99999999999999999999997 89999999
Q ss_pred CeeEEeecCCCCCCCceeccCCCCceEEEeeceeeeEEEe-CCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhC
Q psy7777 208 GTFTISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAI-KGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVED 286 (294)
Q Consensus 208 gTftISNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~-~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 286 (294)
|||||||+||||+++|+|||||||+|||++|+++++|++. ||+++++++|+||||||||||||+++|+||+.|+++||+
T Consensus 174 gTftISNlG~~G~~~~tPIinppq~aIL~vG~~~~~pv~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 174 GTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp CCEEEECGGGTCCSCEECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred CEEEEEeCCCCCccceECccCCCcceEEEcCccEEEEEEecCCcEEEEeeeEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999997 789999999999999999999999999999999999999
Q ss_pred HHHhhcCC
Q psy7777 287 PRIILAGL 294 (294)
Q Consensus 287 P~~lll~~ 294 (294)
|..||++|
T Consensus 254 P~~ll~~~ 261 (262)
T 2ii3_A 254 PAFMLLDL 261 (262)
T ss_dssp THHHHHHC
T ss_pred HHHHHhhc
Confidence 99988764
No 6
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00 E-value=3.3e-60 Score=463.76 Aligned_cols=261 Identities=26% Similarity=0.394 Sum_probs=21.1
Q ss_pred CCCcCCccchhhccccCCcchhhhh--------------hhhhhcCCcccchhhhcccCCCCCCCCCcCCCCCcceEeeC
Q psy7777 18 KEISGTRSEQRVKMNRNGRNLQKRS--------------KYRQSQQPSQLNAIEAATVKLPPADPTKEISGTRSEQRVKM 83 (294)
Q Consensus 18 ~~~~~t~~~~~~~~~~~g~~l~~v~--------------k~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~ 83 (294)
.++.+||..||. +.+.||||..+. +|..........+.+++....| +.+. ...+...++++||
T Consensus 127 ~~~~asP~~R~l-A~e~gvdl~~v~gtG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~p~ 203 (428)
T 3dva_I 127 RRVIAMPSVRKY-AREKGVDIRLVQGTGKNGRVLKEDIDAFLAGGAKPAPAAAEEKAAPAA-AKPA-TTEGEFPETREKM 203 (428)
T ss_dssp -CCCCCHHHHHH-HHHTTCCGGGSCCCSTTSCCCTTTTTTTSCC------------------------------------
T ss_pred cccccCHHHHHH-HHHcCCCHHHCCCCCCCCceeHHHHHHHhhccccccccccccccccCC-CCcc-ccccCCccccccC
Confidence 467899999999 999999997732 2221111000000000000001 1110 1112234788999
Q ss_pred cHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhh---hhccccCceehhHHHhhhcCCccccCCce
Q psy7777 84 NRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE---ERFVEDGATVKAGQQLFKIKPTVCTPNSK 160 (294)
Q Consensus 84 s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~---~~~~~~~~~ikAva~Al~~~P~l~~~N~~ 160 (294)
++|||+||++|++||+++||||++.+||+|+|+++ |+++|...+ .+++..+|++||+++||++||+| |++
T Consensus 204 s~~Rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~----rk~~~~~~~~~g~kls~~~~~ikAva~Al~~~P~~---Na~ 276 (428)
T 3dva_I 204 SGIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAH----RKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVL---NTS 276 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cHHHHHHHHHHHHhcccCCeEEEEEEEeHHHHHHH----HHHhhhhHhhcCCCcCHHHHHHHHHHHHHHhCHHh---hhe
Confidence 99999999999999999999999999999997664 444443222 12344578999999999999999 999
Q ss_pred eecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCCCeeEEeecC
Q psy7777 161 YRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFTISNGG 216 (294)
Q Consensus 161 ~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~ggTftISNlG 216 (294)
|+ +++++|++ |+++|||+||++++||++|||+| |.++|++||||||||+|
T Consensus 277 ~~-----~~~~~i~~-~~~v~igiAV~t~~GL~vPvi~~a~~~sl~eia~~~~~l~~~ar~gkL~~~e~~ggtftISnlG 350 (428)
T 3dva_I 277 ID-----DETEEIIQ-KHYYNIGIAADTDRGLLVPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIG 350 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred Ee-----cCCCeEEE-cCccCeEEEEEcCCceEEeeeccCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCC
Confidence 98 22389999 99999999999999999999998 89999999999999999
Q ss_pred CCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCHHHhhcCC
Q psy7777 217 VFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIILAGL 294 (294)
Q Consensus 217 ~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~lll~~ 294 (294)
|||+++||||||+||+|||++|+++++||+.+|++.+|++|+||||||||||||+++++||++|+++||+|++||+++
T Consensus 351 ~~G~~~ftpIin~pq~aIl~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDG~~aa~Fl~~lk~~Le~P~~lll~~ 428 (428)
T 3dva_I 351 SAGGQWFTPVINHPEVAILGIGRIAEKPIVRDGEIVAAPMLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLMEA 428 (428)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCCccceEeecCCCCceEEEccccEEEEEEECCEEEEeeeEEEEEEecccccchHHHHHHHHHHHHHHhCHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999874
No 7
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-57 Score=414.55 Aligned_cols=201 Identities=30% Similarity=0.415 Sum_probs=180.5
Q ss_pred cceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh--hccccCceehhHHHhhhcCCcc
Q psy7777 77 SEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE--RFVEDGATVKAGQQLFKIKPTV 154 (294)
Q Consensus 77 ~~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~--~~~~~~~~ikAva~Al~~~P~l 154 (294)
.++++|+++|||+||++|++||+++||||++.++|+|+|.++ |+++|...+. +++..++++||+++||++||+|
T Consensus 11 ~~~~~~~~~~rk~ia~~m~~s~~~~P~~~~~~evDvt~l~~~----r~~~k~~~~~~~kls~~~~~ikAv~~Al~~~P~~ 86 (239)
T 3b8k_A 11 VFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLV----RKELNKILEGRSKISVNDFIIKASALACLKVPEA 86 (239)
T ss_dssp SCCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHH----HHHTHHHHTTSSCCCHHHHHHHHHHHHHHHCCCS
T ss_pred CceeccCChHHHHHHHHHHHhccCCCeEEEEEEEEcHHHHHH----HHHHHhhhhccCCCCHHHHHHHHHHHHHHhChHh
Confidence 467889999999999999999999999999999999997653 2222211110 1222357999999999999999
Q ss_pred ccCCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCCCee
Q psy7777 155 CTPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTF 210 (294)
Q Consensus 155 ~~~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~ggTf 210 (294)
|++|+ +++|++ ++++|||+||++++||++|||+| |+++|++||||
T Consensus 87 ---Na~~~-------~~~i~~-~~~v~igvAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtf 155 (239)
T 3b8k_A 87 ---NSSWM-------DTVIRQ-NHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTF 155 (239)
T ss_dssp ---CTTSC-------CCSSSC-SCCCCEEECEECSSCEECCEECCSSCCCHHHHHHHHHHHHHHHHTTCCCGGGGCCCSE
T ss_pred ---hEEEE-------CCEEEE-eCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEE
Confidence 99999 778999 99999999999999999999997 89999999999
Q ss_pred EEeecCCCCCCCceeccCCCCceEEEeeceeeeEEE--eCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCHH
Q psy7777 211 TISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVA--IKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPR 288 (294)
Q Consensus 211 tISNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~--~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~ 288 (294)
||||+||+|+++|+||+||||+|||++|+++++|++ .||+++++++|+||||||||+|||+++|+||++|+++||+|+
T Consensus 156 tISnlG~~g~~~ftpiin~pq~aIl~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~ 235 (239)
T 3b8k_A 156 TISNLGMFGIKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPI 235 (239)
T ss_dssp EEEECCSSCCSSCCCCCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHHHHHHHHCTH
T ss_pred EEEcCCCCCceeEECcCCCCceEEEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHH
Confidence 999999999999999999999999999999999999 478999999999999999999999999999999999999999
Q ss_pred Hhhc
Q psy7777 289 IILA 292 (294)
Q Consensus 289 ~lll 292 (294)
.||+
T Consensus 236 ~ll~ 239 (239)
T 3b8k_A 236 TMLL 239 (239)
T ss_dssp HHHC
T ss_pred hhhC
Confidence 8875
No 8
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=6.5e-57 Score=406.51 Aligned_cols=197 Identities=31% Similarity=0.507 Sum_probs=171.7
Q ss_pred CcceEeeCcHHHHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhhhccccCceehhHHHhhhcCCccc
Q psy7777 76 RSEQRVKMNRMRQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEERFVEDGATVKAGQQLFKIKPTVC 155 (294)
Q Consensus 76 ~~~~~vp~s~~Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~~~~~~~~~ikAva~Al~~~P~l~ 155 (294)
+.++++|++++||+||++|++|++++||||++.+||+|+|.+++. ++|.- ..+++..++++||+++||++||+|
T Consensus 4 ~~~~~~p~~~~r~~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~----~~k~~-g~kls~~~~~ikA~~~Al~~~P~~- 77 (224)
T 3rqc_A 4 GREEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILD----SAKAR-NRKVTVTGFLARIVPSILKQYPYL- 77 (224)
T ss_dssp --CBCCCCCHHHHHHHHHHHHHHHHSCEEEEEECCBTHHHHHHHH----HHTTT-TCCCCHHHHHHHHHHHHHHHSGGG-
T ss_pred CCceEeeCcHHHHHHHHHHHHHhcCCCeEEEEEEEEHHHHHHHHH----HHhhc-CCCCCHHHHHHHHHHHHHHhCHHh-
Confidence 346789999999999999999999999999999999999654211 11100 001122357999999999999999
Q ss_pred cCCceeecccccCCCCeeEeCCCCCceEEEEecCCCeEEeeecC------------------------CCCCCCCCCeeE
Q psy7777 156 TPNSKYRAEKKLRPGRELNSGPPECKPSVAVATPKGLVVPVIRN------------------------LAIEDSDGGTFT 211 (294)
Q Consensus 156 ~~N~~~~~~~~~~~~~~i~~~~~~vnigvAV~t~~GL~vPvi~d------------------------L~~~d~~ggTft 211 (294)
|++|+ +++++|++ ++++|||+||++++||++|||+| |.++|++|||||
T Consensus 78 --N~~~~-----~~~~~i~~-~~~v~igiAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~L~~~e~~ggtft 149 (224)
T 3rqc_A 78 --NAIYD-----ETRRVYIL-KKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEVQDSTFT 149 (224)
T ss_dssp --SBBCC-----SSTTCCCE-ECSCCEEEEEECSSCEEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCCCGGGSCCCSEE
T ss_pred --heEEe-----CCCCEEEE-eCccceEeEEEcCCceEEeEECCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEE
Confidence 99998 22458999 99999999999999999999987 899999999999
Q ss_pred EeecCCCCCCCceeccCCCCceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCHHHhh
Q psy7777 212 ISNGGVFGSLLGTPIINPPQSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRIIL 291 (294)
Q Consensus 212 ISNlG~~G~~~ftpii~~Pq~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~ll 291 (294)
|||+||+|+++|+|||||||+|||++|+++++|+ +++|+||||||||++||+++|+||++|+++||+|+.||
T Consensus 150 ISnlG~~G~~~~tpiin~pq~aIl~vG~~~~~p~--------r~~m~lsls~DHRviDGa~aa~Fl~~l~~~le~p~~ll 221 (224)
T 3rqc_A 150 ITNVGTIGGIMSTPIINYPEVAILGVHRILEREG--------RKYMYLSLSCDHRLIDGAVATRFIVDLKKVIEDPNAII 221 (224)
T ss_dssp EEECTTTCCSEEECCCCTTBSEEEEECCCEEETT--------EEECCEEEEEETTTSCHHHHHHHHHHHHHHHTCTTTTT
T ss_pred EEcCCcCCccceEeccCCCCceEEEecccEEECC--------ceEEEEEEEeccceecHHHHHHHHHHHHHHHhCHHHHh
Confidence 9999999999999999999999999999999875 89999999999999999999999999999999999999
Q ss_pred cCC
Q psy7777 292 AGL 294 (294)
Q Consensus 292 l~~ 294 (294)
+++
T Consensus 222 ~~~ 224 (224)
T 3rqc_A 222 YEI 224 (224)
T ss_dssp C--
T ss_pred hcC
Confidence 874
No 9
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=3e-43 Score=376.04 Aligned_cols=185 Identities=23% Similarity=0.291 Sum_probs=137.8
Q ss_pred HHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhhh----hccccCceehhHHHhhhcCCccccCCceeecccccC
Q psy7777 93 RLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIEE----RFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLR 168 (294)
Q Consensus 93 ~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~~----~~~~~~~~ikAva~Al~~~P~l~~~N~~~~~~~~~~ 168 (294)
+|++|+ ++||||++.+||+|+|.++ |+.+|...++ +++..++++||+++||++||+| |++|+. +
T Consensus 1 ~m~~S~-~~P~~t~~~evDvt~l~~~----R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~---Na~~~~----~ 68 (1113)
T 2xt6_A 1 GMNASL-EVPTATSVRAIPAKLMIDN----RVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNM---NRHFAV----V 68 (1113)
T ss_dssp -------CCCEEEEEEEEECHHHHHH----HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGG---GCEEEE----S
T ss_pred Chhhhc-cCCeEEEEEEEehHHHHHH----HHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHh---hEEEec----c
Confidence 588997 7999999999999997553 2223221110 1112257999999999999999 999983 1
Q ss_pred CC-CeeEeCCCCCceEEEEecC--CC---eEEeeecC------------------------CCCCCCCCCeeEEeecCCC
Q psy7777 169 PG-RELNSGPPECKPSVAVATP--KG---LVVPVIRN------------------------LAIEDSDGGTFTISNGGVF 218 (294)
Q Consensus 169 ~~-~~i~~~~~~vnigvAV~t~--~G---L~vPvi~d------------------------L~~~d~~ggTftISNlG~~ 218 (294)
++ +.|++ ++++|||+||+++ +| |+||||+| |+++|++||||||||+|||
T Consensus 69 ~~~~~i~~-~~~vnigiAV~t~~~~G~~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~gkL~~~d~~ggTftISNlG~~ 147 (1113)
T 2xt6_A 69 DGKPTAIT-PAHTNLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTAEDFSGVTISLTNPGTL 147 (1113)
T ss_dssp SSSEEEEC-CSSCCEEEEC-----------CEEEECCGGGCCHHHHHHHHHHHHHHHTTTCCCGGGTSCCSEEEECC---
T ss_pred CCCceEEE-eCcccEEEEEeccCCCCceeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCEEEEeCCCcC
Confidence 11 27999 9999999999997 67 99999998 8999999999999999999
Q ss_pred CCCCceeccCCCCceEEEeeceeeeEEEeC------CeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCHHHh
Q psy7777 219 GSLLGTPIINPPQSAILGMHGTFERPVAIK------GQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDPRII 290 (294)
Q Consensus 219 G~~~ftpii~~Pq~ail~vG~i~~~pv~~~------g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~l 290 (294)
|+++|+|||||||+|||++|+++++|++.+ |+++++++|+||||||||||||+++|+||+.|+++||+|+.+
T Consensus 148 G~~~~tPIinppq~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~FL~~lk~~Le~p~~w 225 (1113)
T 2xt6_A 148 GTVHSVPRLMQGQGAIIGAGAMEYPAEFQGASEERIADLGIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLDDDFF 225 (1113)
T ss_dssp ---------CTTCSEEEEECCCBCCTTSTTCCHHHHHHHTCCCEEEEEEEEETTTCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCcceECCCCCCCceEEEcCccEEEeEEcCCCcccCCceeEeeeeEEEEEECcceechHHHHHHHHHHHHHHhCcHHH
Confidence 999999999999999999999999999866 689999999999999999999999999999999999999743
No 10
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=100.00 E-value=3.6e-40 Score=296.23 Aligned_cols=165 Identities=13% Similarity=0.109 Sum_probs=137.5
Q ss_pred HHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhh-hhccccCceehhHHHhhhcCCccccCCceeeccc
Q psy7777 87 RQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE-ERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEK 165 (294)
Q Consensus 87 Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~-~~~~~~~~~ikAva~Al~~~P~l~~~N~~~~~~~ 165 (294)
||.-.+.. .+ .++||||++.|||+|+|.++ .+ .+++-.++++||+++||++||+| |++|+
T Consensus 18 R~~~f~~f-~~-~~~P~~t~~~evDvt~l~~~-----------rk~~~ls~~~~~ikAv~~Al~~~P~~---Na~~~--- 78 (219)
T 1q23_A 18 RKEHFEAF-QS-VAQCTYNQTVQLDITAFLKT-----------VKKNKHKFYPAFIHILARLMNAHPEF---RMAMK--- 78 (219)
T ss_dssp THHHHHHH-TT-TTCEEEEEEEEEECHHHHHH-----------HHHTTCCHHHHHHHHHHHHHTTCGGG---SEEEE---
T ss_pred CHHHHHHh-cC-CCCcEEEEEEEEEhHHHHHH-----------HHHcCCCHHHHHHHHHHHHHHhChHh---hEEEE---
Confidence 44445554 33 47999999999999996542 11 12223367999999999999999 99999
Q ss_pred ccCCCCeeEeCCCCCceEEEE-ecCCCeEEeeecC------------------------CCC-CCCCCCeeEEeecCCCC
Q psy7777 166 KLRPGRELNSGPPECKPSVAV-ATPKGLVVPVIRN------------------------LAI-EDSDGGTFTISNGGVFG 219 (294)
Q Consensus 166 ~~~~~~~i~~~~~~vnigvAV-~t~~GL~vPvi~d------------------------L~~-~d~~ggTftISNlG~~G 219 (294)
+++|++ ++++|||+|| ++++||++||+.+ |++ +|+ ||||||||+||+|
T Consensus 79 ----~~~i~~-~~~v~igiAV~~t~~GL~~pvi~~~~~~l~~i~~~~~~l~~~ar~~~kL~~~~~~-ggtftISnlG~~~ 152 (219)
T 1q23_A 79 ----DGELVI-WDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFI-ENMFFVSANPWVS 152 (219)
T ss_dssp ----TTEEEE-ESCCEEEEEEEETTTTEEEEEECCCCSSHHHHHHHHHHHHHHHTTCCSSSTTCCC-SSEEEEEECTTCC
T ss_pred ----CCEEEE-ecccCeEEEEEecCCcEEEEEEecCCCCHHHHHHHHHHHHHHHHccCCCCCcccc-CCEEEEEcCcccc
Confidence 789999 9999999999 9999999999864 655 888 9999999999965
Q ss_pred CCCceeccCCCC------ceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhCH
Q psy7777 220 SLLGTPIINPPQ------SAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVEDP 287 (294)
Q Consensus 220 ~~~ftpii~~Pq------~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P 287 (294)
||||+|+|+ ++||++|+++++ +| +++||||||||||+|||+++|+||++|+++||+|
T Consensus 153 ---ft~i~~~~~~~~~~~~pIi~~G~~~~~----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~~ 215 (219)
T 1q23_A 153 ---FTSFDLNVANMDNFFAPVFTMGKYYTQ----GD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEW 215 (219)
T ss_dssp ---CSEEEEEESCCTTCCSCEEEECCCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ---ccccccCCCCCccceeEEEecccEEEE----CC----cEEEEEEEEEEchhhChHHHHHHHHHHHHHHhCc
Confidence 555555553 589999999875 55 6899999999999999999999999999999985
No 11
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00 E-value=3.5e-39 Score=288.62 Aligned_cols=168 Identities=10% Similarity=0.060 Sum_probs=138.1
Q ss_pred HHHHHHHHHHhhccCcEEEEEEEEeeccccccCCCCCCCcchhhh-hhccccCceehhHHHhhhcCCccccCCceeeccc
Q psy7777 87 RQRIAQRLKEAQNVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE-ERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEK 165 (294)
Q Consensus 87 Rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~-~~~~~~~~~ikAva~Al~~~P~l~~~N~~~~~~~ 165 (294)
||.-.+..... ++||||++.|+|+|+|.++ .+ .+++-.++++||+++||++||++ |++|+
T Consensus 13 R~~~f~~f~~~--~~P~~~~~~evDvt~l~~~-----------rk~~~ls~~~~~ikAv~~Al~~~P~~---Na~~~--- 73 (213)
T 3cla_A 13 RREHFEFYRHR--LPCGFSLTSKIDITTLKKS-----------LDDSAYKFYPVMIYLIAQAVNQFDEL---RMAIK--- 73 (213)
T ss_dssp THHHHHHHHHT--SCCEEEEEEEEECHHHHHH-----------HHTSSCCHHHHHHHHHHHHHTTCGGG---SEEEE---
T ss_pred cHHHHHHHhCC--CCceEEEEEEEEHHHHHHH-----------HHHhCCCHHHHHHHHHHHHHhhCHHh---hEEEE---
Confidence 44444444333 6999999999999996442 11 11222367999999999999999 99999
Q ss_pred ccCCCCeeEeCCCCCceEEEE-ecCCCeEEeeecC------------------------CCC-CCCCCCeeEEeecCCCC
Q psy7777 166 KLRPGRELNSGPPECKPSVAV-ATPKGLVVPVIRN------------------------LAI-EDSDGGTFTISNGGVFG 219 (294)
Q Consensus 166 ~~~~~~~i~~~~~~vnigvAV-~t~~GL~vPvi~d------------------------L~~-~d~~ggTftISNlG~~G 219 (294)
+++|++ ++++|||+|| ++++||++||+.+ |+| +|++||||||||+||++
T Consensus 74 ----~~~i~~-~~~v~igiAVf~t~~GL~vpvi~~~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~ggtftISnlg~~~ 148 (213)
T 3cla_A 74 ----DDELIV-WDSVDPQFTVFHQETETFSALSCPYSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVN 148 (213)
T ss_dssp ----TTEEEE-ESCCEEEEEEEETTTTEEEEEECCCCSSHHHHHHHHHHHHHHHTTCCSSSTTSSCCSSEEEEEEETTCC
T ss_pred ----CCEEEE-EeccceeEEEEeCCCceEEEEEecCCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEEcCCCCC
Confidence 789999 9999999999 9999999999864 767 78999999999999977
Q ss_pred CCCceeccCCCC---ceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhhC
Q psy7777 220 SLLGTPIINPPQ---SAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAVED 286 (294)
Q Consensus 220 ~~~ftpii~~Pq---~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 286 (294)
.+.|+.-++.+. .+|+++|+++++ +| +++||||||||||++||+++|+||++|+++||+
T Consensus 149 ft~i~~~~~~g~~~~~PIi~~G~~~~~----~~----~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 210 (213)
T 3cla_A 149 FDSFNLNVANFTDYFAPIITMAKYQQE----GD----RLLLPLSVQVHHAVCDGFHVARFINRLQELCNS 210 (213)
T ss_dssp CSCCCCCCSCCTTCCSCEEEEECCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTS
T ss_pred cccccccCCCCCcccccEEEeeEEEEE----CC----eEEEEEEEEEcccccChHHHHHHHHHHHHHHHh
Confidence 665543333332 479999999875 56 689999999999999999999999999999998
No 12
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.3e-37 Score=276.71 Aligned_cols=157 Identities=15% Similarity=0.085 Sum_probs=130.5
Q ss_pred ccCcEEEEEEEEeeccccccCCCCCCCcchhhh-hhccccCceehhHHHhhhcCCccccCCceeecccccCCCCeeEeCC
Q psy7777 99 NVNAMLTTFNEIDMRKESNTSMPVPAPCNGIIE-ERFVEDGATVKAGQQLFKIKPTVCTPNSKYRAEKKLRPGRELNSGP 177 (294)
Q Consensus 99 ~~iP~~~~~~evDvt~l~~~~~~~r~~~n~l~~-~~~~~~~~~ikAva~Al~~~P~l~~~N~~~~~~~~~~~~~~i~~~~ 177 (294)
.++||||++.+||+|+|.++ .+ .+++-.++++||+++||++||+| |++|+. +++|++ +
T Consensus 25 ~~~P~~~~~~evDvt~l~~~-----------rk~~~ls~~~~~ikAv~~Al~~~P~~---n~~~~~------~~~i~~-~ 83 (217)
T 2i9d_A 25 FQNPQLSITSEVECGGARQR-----------AKAAGQSFFLHYLYAVLRAANEIPEF---RYRIDP------DGRVVL-Y 83 (217)
T ss_dssp CSBCEEEEEEEEECHHHHHH-----------HHHTTCCHHHHHHHHHHHHHHHSGGG---GEEECT------TSCEEE-E
T ss_pred CCCceEEEEEEEEhHHHHHH-----------HHHcCCCHHHHHHHHHHHHHHhCHHh---heEEcC------CCEEEE-e
Confidence 36999999999999996442 11 12223367999999999999999 999982 678999 9
Q ss_pred CCCceEEEE-ecCCCeEEeeec----C--------------------CCCC------CCCCCeeEEeecCCCCCCCceec
Q psy7777 178 PECKPSVAV-ATPKGLVVPVIR----N--------------------LAIE------DSDGGTFTISNGGVFGSLLGTPI 226 (294)
Q Consensus 178 ~~vnigvAV-~t~~GL~vPvi~----d--------------------L~~~------d~~ggTftISNlG~~G~~~ftpi 226 (294)
+++|||+|| ++++||++|++. | |+|+ |++||||||||+||++.+.|+..
T Consensus 84 ~~i~igvAVf~t~~GL~~pv~~~~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~~~e~~ggtftISnlg~~~ft~i~~~ 163 (217)
T 2i9d_A 84 DTIDMLSPIKIKENGKFFTTRFPYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFTSITGT 163 (217)
T ss_dssp SCCEEEEEEECSTTSCEEEEEECCCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTTCCCSEECCC
T ss_pred cccCeEEEEEecCCceEeEEEecCCCCHHHHHHHHHHHHHHHHhcCCCCCccccccccCCCCEEEEEcCCccccceeecC
Confidence 999999999 999999988763 2 7774 89999999999999776655443
Q ss_pred cCCC---CceEEEeeceeeeEEEeCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHh
Q psy7777 227 INPP---QSAILGMHGTFERPVAIKGQVVVKPMMYVALTYDHRLIDGREAVLFLRKIKAAV 284 (294)
Q Consensus 227 i~~P---q~ail~vG~i~~~pv~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~L 284 (294)
.+.+ ..+|+++|+++++ +| +++||||||||||+|||+++|+||++|+++|
T Consensus 164 ~~~g~~~~~PIi~~Gk~~~~----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 164 QEKRSGNNYPLLNAGKAIIR----EG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp BCSTTCCSSCEEEECCCEEE----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCccceEEEEecceEEEE----CC----cEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 4433 2579999999875 56 7899999999999999999999999999987
No 13
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=64.16 E-value=5.8 Score=37.42 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=27.7
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhhC
Q psy7777 257 MYVALTYDHRLIDGREAVLFLRKIKAAVED 286 (294)
Q Consensus 257 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 286 (294)
+-|+++++|.++||.-+..|++.|.+.+..
T Consensus 148 ~~lg~~~~H~v~Dg~g~~~Fl~awa~~~rg 177 (451)
T 2rkv_A 148 LILTVNGQHGAMDMVGQDAVIRLLSKACRN 177 (451)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeehhccccHHHHHHHHHHHHHHhcC
Confidence 778999999999999999999999998764
No 14
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=63.97 E-value=6.3 Score=37.40 Aligned_cols=29 Identities=21% Similarity=0.309 Sum_probs=27.4
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhh
Q psy7777 257 MYVALTYDHRLIDGREAVLFLRKIKAAVE 285 (294)
Q Consensus 257 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 285 (294)
+-|+++++|.++||.-+..|++.|.+...
T Consensus 162 ~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r 190 (454)
T 2e1v_A 162 IAIGITNHHCLGDASTRFCFLKAWTSIAR 190 (454)
T ss_dssp EEEEEEECGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeeeeecchhHHHHHHHHHHHHhc
Confidence 77999999999999999999999999887
No 15
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=63.75 E-value=6 Score=37.22 Aligned_cols=29 Identities=17% Similarity=0.276 Sum_probs=27.1
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhh
Q psy7777 257 MYVALTYDHRLIDGREAVLFLRKIKAAVE 285 (294)
Q Consensus 257 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 285 (294)
+-|+++++|.+.||.-+..|++.|.+...
T Consensus 152 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 180 (421)
T 2bgh_A 152 TAIGVNLSHKIADVLSLATFLNAWTATCR 180 (421)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeeEEechHHHHHHHHHHHHHHhc
Confidence 77899999999999999999999999875
No 16
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=62.98 E-value=5.9 Score=37.53 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=27.4
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhh
Q psy7777 257 MYVALTYDHRLIDGREAVLFLRKIKAAVE 285 (294)
Q Consensus 257 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 285 (294)
+-|+++++|.++||.-+..|++.|.+...
T Consensus 157 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r 185 (453)
T 2xr7_A 157 ISIGFTNHHVAGDGATIVKFVRAWALLNK 185 (453)
T ss_dssp EEEEEEECTTTCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEeeeeeeechhHHHHHHHHHHHHhh
Confidence 77899999999999999999999999887
No 17
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=60.93 E-value=7.4 Score=36.80 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=27.1
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhh
Q psy7777 257 MYVALTYDHRLIDGREAVLFLRKIKAAVE 285 (294)
Q Consensus 257 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 285 (294)
+-|+++++|.++||.-...|++.|.+...
T Consensus 150 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r 178 (439)
T 4g22_A 150 VSLGVGMRHHAADGFSGLHFINSWSDMAR 178 (439)
T ss_dssp EEEEEEECTTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeeeccCcHHHHHHHHHHHHHHhC
Confidence 77899999999999999999999999875
No 18
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=39.43 E-value=7.2 Score=27.15 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=18.8
Q ss_pred CCCCcCCccchhhccccCCcchhhh
Q psy7777 17 TKEISGTRSEQRVKMNRNGRNLQKR 41 (294)
Q Consensus 17 ~~~~~~t~~~~~~~~~~~g~~l~~v 41 (294)
..++.++|.+++. +..+|||+..+
T Consensus 5 ~~~v~aSPaaRrl-A~e~gIdl~~V 28 (58)
T 3rnm_E 5 GRKTLATPAVRNL-AMENNIKLSEV 28 (58)
T ss_dssp ---CCCCHHHHHH-HHHTTCCGGGC
T ss_pred CCCcCcCHHHHHH-HHHcCCCHHHC
Confidence 4578899999999 99999999763
No 19
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=38.60 E-value=12 Score=24.90 Aligned_cols=26 Identities=4% Similarity=0.060 Sum_probs=20.8
Q ss_pred CCCCCCcCCccchhhccccCCcchhhh
Q psy7777 15 DPTKEISGTRSEQRVKMNRNGRNLQKR 41 (294)
Q Consensus 15 ~~~~~~~~t~~~~~~~~~~~g~~l~~v 41 (294)
++..++..+|..++. +...|+|+..+
T Consensus 5 ~~~~~~~asP~aR~l-A~e~gidl~~V 30 (51)
T 1bal_A 5 EEQNNDALSPAIRRL-LAEHNLDASAI 30 (51)
T ss_dssp SCCSSCCCCGGGTTH-HHHTTCCTTSS
T ss_pred ccCCCCCCChHHHHH-HHHcCCCcccc
Confidence 445566789999998 99999999663
No 20
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=35.43 E-value=30 Score=31.26 Aligned_cols=28 Identities=14% Similarity=0.313 Sum_probs=25.3
Q ss_pred EEEEeecccccchHHHHHHHHHHHHHhh
Q psy7777 258 YVALTYDHRLIDGREAVLFLRKIKAAVE 285 (294)
Q Consensus 258 ~lsls~DHRviDGa~aa~Fl~~lk~~Le 285 (294)
.|-+++||-++||.-...|+++|.+...
T Consensus 117 ~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 117 ELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 4788999999999999999999988765
No 21
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=29.12 E-value=42 Score=30.52 Aligned_cols=29 Identities=17% Similarity=0.335 Sum_probs=25.8
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhh
Q psy7777 257 MYVALTYDHRLIDGREAVLFLRKIKAAVE 285 (294)
Q Consensus 257 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 285 (294)
..|-+++||-++||+-...|+++|.+...
T Consensus 118 ~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~ 146 (436)
T 1l5a_A 118 HLIYTRAHHIVLDGYGMMLFEQRLSQHYQ 146 (436)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeehhheecHhHHHHHHHHHHHHHH
Confidence 34788999999999999999999998775
No 22
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=29.04 E-value=14 Score=23.23 Aligned_cols=20 Identities=5% Similarity=0.220 Sum_probs=16.2
Q ss_pred CcCCccchhhccccCCcchhh
Q psy7777 20 ISGTRSEQRVKMNRNGRNLQK 40 (294)
Q Consensus 20 ~~~t~~~~~~~~~~~g~~l~~ 40 (294)
|.++|++++. +...|+|+..
T Consensus 1 ~~asP~ar~l-a~e~gidl~~ 20 (41)
T 2eq9_C 1 MLAVPAARKL-ARELGIPIEE 20 (41)
T ss_dssp CCBCHHHHHH-HHHTTCCGGG
T ss_pred CCCChHHHHH-HHHcCCChhh
Confidence 3468999997 9999999865
No 23
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=28.38 E-value=12 Score=26.23 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=18.4
Q ss_pred CCcCCccchhhccccCCcchhhh
Q psy7777 19 EISGTRSEQRVKMNRNGRNLQKR 41 (294)
Q Consensus 19 ~~~~t~~~~~~~~~~~g~~l~~v 41 (294)
++.++|+.++. +...|+|+..+
T Consensus 4 ~~~asPaaRkl-A~e~gidl~~V 25 (62)
T 1w4i_A 4 EVAAMPAARRL-AKELGIDLSKV 25 (62)
T ss_dssp SSEECHHHHHH-HHHHTCCGGGS
T ss_pred cccCChHHHHH-HHHhCCChhhc
Confidence 46679999998 99999999773
No 24
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=24.30 E-value=64 Score=30.29 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=26.0
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhhC
Q psy7777 257 MYVALTYDHRLIDGREAVLFLRKIKAAVED 286 (294)
Q Consensus 257 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 286 (294)
..+-+++||-++||+-...|+++|.+....
T Consensus 214 ~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~ 243 (520)
T 2jgp_A 214 YVLFTDMHHSISDGVSSGILLAEWVQLYQG 243 (520)
T ss_dssp EEEEEEEBGGGCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEccceeecHhHHHHHHHHHHHHHcc
Confidence 347788999999999999999999887754
No 25
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=23.09 E-value=61 Score=30.18 Aligned_cols=28 Identities=18% Similarity=0.284 Sum_probs=25.1
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHh
Q psy7777 257 MYVALTYDHRLIDGREAVLFLRKIKAAV 284 (294)
Q Consensus 257 m~lsls~DHRviDGa~aa~Fl~~lk~~L 284 (294)
..|-+++||-++||.-...|+++|.+..
T Consensus 134 ~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y 161 (493)
T 4hvm_A 134 VVLGVVAHQMLLDARSRYMVLGAVWQAY 161 (493)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecchhhccHHHHHHHHHHHHHHh
Confidence 3577889999999999999999999876
No 26
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=21.58 E-value=22 Score=23.33 Aligned_cols=23 Identities=9% Similarity=0.213 Sum_probs=18.2
Q ss_pred CCCcCCccchhhccccCCcchhhh
Q psy7777 18 KEISGTRSEQRVKMNRNGRNLQKR 41 (294)
Q Consensus 18 ~~~~~t~~~~~~~~~~~g~~l~~v 41 (294)
.++..+|+.++. +...|+|+..+
T Consensus 5 ~~~~asP~ar~l-a~e~gidl~~v 27 (49)
T 1w85_I 5 RRVIAMPSVRKY-AREKGVDIRLV 27 (49)
T ss_dssp -CCCCCHHHHHH-HHHTTCCTTTS
T ss_pred CcccCChHHHHH-HHHcCCCcccc
Confidence 356679999998 99999998663
No 27
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=20.48 E-value=79 Score=28.93 Aligned_cols=27 Identities=15% Similarity=0.324 Sum_probs=24.1
Q ss_pred EEEeecccccchHHHHHHHHHHHHHhh
Q psy7777 259 VALTYDHRLIDGREAVLFLRKIKAAVE 285 (294)
Q Consensus 259 lsls~DHRviDGa~aa~Fl~~lk~~Le 285 (294)
|-+++||-++||+-...|+++|.++..
T Consensus 141 l~l~~HH~i~Dg~S~~~l~~el~~~Y~ 167 (466)
T 2xhg_A 141 LFLAIHHLVVDGISWRILFEDLATGYA 167 (466)
T ss_dssp EEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEeeeeeechhhHHHHHHHHHHHHH
Confidence 458999999999999999999988764
Done!