Your job contains 1 sequence.
>psy7780
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD
TDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD
GPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSR
VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR
IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK
ESVLYRKKEGTPEGLYL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7780
(317 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 588 8.1e-104 3
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 412 9.1e-103 3
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 566 2.4e-100 3
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 566 2.4e-100 3
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 564 3.9e-100 3
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 563 4.9e-100 3
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 563 4.9e-100 3
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 563 4.9e-100 3
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 563 4.9e-100 3
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 563 4.9e-100 3
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 563 4.9e-100 3
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 563 4.9e-100 3
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 560 1.0e-99 3
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 559 1.3e-99 3
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 521 4.3e-93 3
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 512 9.7e-88 3
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 510 1.6e-87 3
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 461 5.8e-82 3
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 461 5.8e-82 3
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 426 3.4e-76 3
UNIPROTKB|J9NWB0 - symbol:J9NWB0 "Uncharacterized protein... 468 7.6e-72 2
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 505 2.0e-69 2
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 422 5.4e-65 2
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 429 2.3e-64 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 304 1.3e-61 3
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 304 1.6e-61 3
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 304 2.6e-61 3
WB|WBGene00004505 - symbol:rpt-5 species:6239 "Caenorhabd... 293 5.3e-61 3
UNIPROTKB|O76371 - symbol:rpt-5 "Protein RPT-5" species:6... 293 5.3e-61 3
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 294 8.4e-59 3
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 270 4.4e-56 3
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 272 1.5e-55 3
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 265 1.8e-55 3
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 310 2.6e-55 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 271 7.9e-55 3
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 261 2.0e-54 3
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 284 6.9e-54 3
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 284 6.9e-54 3
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 316 4.1e-52 3
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 257 1.2e-51 3
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 311 5.6e-49 3
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 332 4.8e-48 3
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 375 6.7e-43 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 325 7.9e-43 3
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 319 2.6e-42 3
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 315 6.9e-42 3
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 311 6.9e-42 3
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 311 1.4e-41 3
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 311 1.8e-41 3
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 311 1.8e-41 3
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 311 1.8e-41 3
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 311 1.8e-41 3
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 311 1.8e-41 3
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 311 1.8e-41 3
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 311 1.8e-41 3
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 311 1.8e-41 3
UNIPROTKB|Q3T030 - symbol:PSMC4 "26S protease regulatory ... 324 5.2e-41 2
UNIPROTKB|E2RH48 - symbol:PSMC4 "Uncharacterized protein"... 324 5.2e-41 2
UNIPROTKB|P43686 - symbol:PSMC4 "26S protease regulatory ... 324 5.2e-41 2
UNIPROTKB|Q4R7L3 - symbol:PSMC4 "26S protease regulatory ... 324 5.2e-41 2
MGI|MGI:1346093 - symbol:Psmc4 "proteasome (prosome, macr... 324 5.2e-41 2
RGD|621102 - symbol:Psmc4 "proteasome (prosome, macropain... 324 5.2e-41 2
UNIPROTKB|F1MG70 - symbol:PSMC4 "26S protease regulatory ... 324 5.2e-41 2
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 316 5.9e-41 3
FB|FBgn0028686 - symbol:Rpt3 "Regulatory particle triple-... 327 8.4e-41 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 302 1.5e-40 3
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 313 2.0e-40 3
ZFIN|ZDB-GENE-030131-5083 - symbol:psmc4 "proteasome (pro... 318 2.2e-40 2
FB|FBgn0037742 - symbol:Rpt3R "Regulatory particle triple... 317 2.8e-40 2
UNIPROTKB|O42586 - symbol:psmc3-b "26S protease regulator... 296 4.0e-40 3
UNIPROTKB|E9PM69 - symbol:PSMC3 "26S protease regulatory ... 298 5.1e-40 3
UNIPROTKB|F1PBK7 - symbol:PSMC3 "Uncharacterized protein"... 298 8.1e-40 3
UNIPROTKB|P17980 - symbol:PSMC3 "26S protease regulatory ... 298 8.1e-40 3
RGD|61905 - symbol:Psmc3 "proteasome (prosome, macropain)... 298 8.1e-40 3
MGI|MGI:1098754 - symbol:Psmc3 "proteasome (prosome, macr... 298 1.0e-39 3
UNIPROTKB|Q6P6U2 - symbol:Psmc3 "26S protease regulatory ... 298 1.0e-39 3
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 305 1.1e-39 3
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 305 1.1e-39 3
UNIPROTKB|F1SID4 - symbol:PSMC3 "Uncharacterized protein"... 298 1.3e-39 3
UNIPROTKB|J9NWA6 - symbol:LOC100687152 "Uncharacterized p... 295 2.1e-39 3
UNIPROTKB|F1MWE0 - symbol:PSMC3 "Uncharacterized protein"... 298 2.4e-39 3
ZFIN|ZDB-GENE-030131-666 - symbol:psmc3 "proteasome (pros... 299 2.5e-39 3
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 310 3.2e-39 2
UNIPROTKB|Q8I1V1 - symbol:PFD0665c "26S proteasome AAA-AT... 310 3.2e-39 2
FB|FBgn0028684 - symbol:Rpt5 "Regulatory particle triple-... 291 7.1e-39 3
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 296 7.6e-39 3
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 290 9.1e-39 3
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 315 1.1e-38 2
UNIPROTKB|F1NDQ1 - symbol:PSMC3 "Uncharacterized protein"... 298 1.5e-38 3
UNIPROTKB|F1P3L9 - symbol:PSMC3 "Uncharacterized protein"... 298 2.4e-38 3
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 303 3.5e-38 2
ASPGD|ASPL0000010049 - symbol:AN4236 species:162425 "Emer... 297 5.0e-38 3
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 306 1.2e-37 2
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 306 1.2e-37 2
DICTYBASE|DDB_G0284415 - symbol:psmC3 "26S proteasome ATP... 293 1.3e-37 3
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 239 2.5e-37 3
SGD|S000002802 - symbol:RPT3 "ATPase of the 19S regulator... 294 8.2e-37 2
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 306 1.0e-36 2
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 268 3.0e-36 3
POMBASE|SPAC3A11.12c - symbol:rpt5 "19S proteasome regula... 284 7.1e-36 3
WARNING: Descriptions of 533 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 588 (212.0 bits), Expect = 8.1e-104, Sum P(3) = 8.1e-104
Identities = 121/142 (85%), Positives = 126/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 299 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 357
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTKRRIF IHTSRMTLAEDVNL ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 358 KTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 417
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKESVLYRKKEGTPEGLYL
Sbjct: 418 FKKSKESVLYRKKEGTPEGLYL 439
Score = 423 (154.0 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 85/85 (100%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS
Sbjct: 237 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 296
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 297 NSGGEREIQRTMLELLNQLDGFDSR 321
Score = 331 (121.6 bits), Expect = 8.1e-104, Sum P(3) = 8.1e-104
Identities = 65/68 (95%), Positives = 66/68 (97%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVG LEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD
Sbjct: 106 MSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 165
Query: 61 TDPMVTAV 68
TDPMVT +
Sbjct: 166 TDPMVTVM 173
Score = 143 (55.4 bits), Expect = 8.1e-104, Sum P(3) = 8.1e-104
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 234 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 265
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 412 (150.1 bits), Expect = 9.1e-103, Sum P(3) = 9.1e-103
Identities = 83/118 (70%), Positives = 97/118 (82%)
Query: 201 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQEL 260
D+KVIMATNRI LDPALIRPGRIDRKI F PDE TKR+IF IHTS+M L EDVNL+EL
Sbjct: 331 DIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEEL 390
Query: 261 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEG-LYL 317
I KDDLSGA+IKAI +EAGL+ALRERRM+V +DF++++E VL K EG P G LY+
Sbjct: 391 IQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAREKVLKTKDEGGPAGGLYI 448
Score = 381 (139.2 bits), Expect = 9.1e-103, Sum P(3) = 9.1e-103
Identities = 74/84 (88%), Positives = 80/84 (95%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGP+LVR+LF AEEH+PSIVFIDEIDA+GTKRYD+
Sbjct: 244 AVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDA 303
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SG EREIQRTMLELLNQLDGFD+
Sbjct: 304 QSGAEREIQRTMLELLNQLDGFDT 327
Score = 259 (96.2 bits), Expect = 9.1e-103, Sum P(3) = 9.1e-103
Identities = 50/68 (73%), Positives = 60/68 (88%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDD+HAIVST+ G E+YVSI+SFVDKD LEPGCSVLL+HK ++VG+L DD
Sbjct: 114 MSVGTLEEIIDDDHAIVSTA-GPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDD 172
Query: 61 TDPMVTAV 68
TDPM+ +
Sbjct: 173 TDPMINVM 180
Score = 140 (54.3 bits), Expect = 1.9e-77, Sum P(3) = 1.9e-77
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGP+L
Sbjct: 241 LAKAVANQTSATFLRVVGSELIQKYLGDGPRL 272
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 566 (204.3 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 115/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 299 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 357
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 358 KTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 417
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 418 FKKSKENVLYKKQEGTPEGLYL 439
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 237 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 296
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 297 NSGGEREIQRTMLELLNQLDGFDSR 321
Score = 320 (117.7 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 106 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 165
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 166 TDPLVTVM 173
Score = 143 (55.4 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 234 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 265
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 566 (204.3 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 115/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 298 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 356
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 357 KTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 416
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 417 FKKSKENVLYKKQEGTPEGLYL 438
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 236 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 295
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 296 NSGGEREIQRTMLELLNQLDGFDSR 320
Score = 320 (117.7 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 105 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 164
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 165 TDPLVTVM 172
Score = 143 (55.4 bits), Expect = 2.4e-100, Sum P(3) = 2.4e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 233 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 264
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 564 (203.6 bits), Expect = 3.9e-100, Sum P(3) = 3.9e-100
Identities = 114/142 (80%), Positives = 126/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTKRRIF IHTSRMT+AEDV+L +LI+AKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 419 FKKSKENVLYKKQEGTPEGLYL 440
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 3.9e-100, Sum P(3) = 3.9e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 3.9e-100, Sum P(3) = 3.9e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 563 (203.2 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L +LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 419 FKKSKENVLYKKQEGTPEGLYL 440
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 563 (203.2 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L +LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 419 FKKSKENVLYKKQEGTPEGLYL 440
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 563 (203.2 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 227 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 285
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L +LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 286 KTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 345
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 346 FKKSKENVLYKKQEGTPEGLYL 367
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 165 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 224
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 225 NSGGEREIQRTMLELLNQLDGFDSR 249
Score = 320 (117.7 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 34 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 93
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 94 TDPLVTVM 101
Score = 143 (55.4 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 162 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 193
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 563 (203.2 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L +LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 419 FKKSKENVLYKKQEGTPEGLYL 440
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 563 (203.2 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L +LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 419 FKKSKENVLYKKQEGTPEGLYL 440
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 563 (203.2 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L +LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 419 FKKSKENVLYKKQEGTPEGLYL 440
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 563 (203.2 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 114/142 (80%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L +LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 419 FKKSKENVLYKKQEGTPEGLYL 440
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 4.9e-100, Sum P(3) = 4.9e-100
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 560 (202.2 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 113/142 (79%), Positives = 125/142 (88%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTKRRIF IHTSRMT+A+DV L +LI+AKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 419 FKKSKENVLYKKQEGTPEGLYL 440
Score = 422 (153.6 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 84/85 (98%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 559 (201.8 bits), Expect = 1.3e-99, Sum P(3) = 1.3e-99
Identities = 114/142 (80%), Positives = 123/142 (86%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE
Sbjct: 300 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+RIF IHTSRMTLA+DV L ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED
Sbjct: 359 KTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 418
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+ LY+K EGTPEGLYL
Sbjct: 419 FKKSKENFLYKKTEGTPEGLYL 440
Score = 418 (152.2 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 83/85 (97%), Positives = 84/85 (98%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEH PSIVFIDEIDA+GTKRYDS
Sbjct: 238 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSR 322
Score = 320 (117.7 bits), Expect = 1.3e-99, Sum P(3) = 1.3e-99
Identities = 62/68 (91%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKD LEPGCSVLLNHKVHAV+GVL DD
Sbjct: 107 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 143 (55.4 bits), Expect = 1.3e-99, Sum P(3) = 1.3e-99
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 235 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 266
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 521 (188.5 bits), Expect = 4.3e-93, Sum P(3) = 4.3e-93
Identities = 105/142 (73%), Positives = 121/142 (85%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKV+MATNRIE+LDPALIRPGRIDRKIEFPLPDE
Sbjct: 303 GGEREIQ-RTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDE 361
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTKRRIF IHTSRMTL ++VNL+E I AKD+LSGADIKA+CTEAGL+ALRERRM+VT ED
Sbjct: 362 KTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMED 421
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
F+KSKE+VLYRKKEG PE LYL
Sbjct: 422 FQKSKENVLYRKKEGAPEELYL 443
Score = 413 (150.4 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 82/85 (96%), Positives = 85/85 (100%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLR+VGSELIQKYLGDGPK+VRELFRVAEE+APSIVFIDEIDAVGTKRYDS
Sbjct: 241 AVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDS 300
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 301 NSGGEREIQRTMLELLNQLDGFDSR 325
Score = 299 (110.3 bits), Expect = 4.3e-93, Sum P(3) = 4.3e-93
Identities = 56/68 (82%), Positives = 65/68 (95%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
M+VG+LEEIIDD HAIVST+VGSEHYV+I+SFVDK+QLEPGCSVLLNHK HAV+GVLSDD
Sbjct: 110 MAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDD 169
Query: 61 TDPMVTAV 68
TDPMV+ +
Sbjct: 170 TDPMVSVM 177
Score = 140 (54.3 bits), Expect = 4.3e-93, Sum P(3) = 4.3e-93
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLR+VGSELIQKYLGDGPK+
Sbjct: 238 LAKAVANQTSATFLRIVGSELIQKYLGDGPKM 269
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 512 (185.3 bits), Expect = 9.7e-88, Sum P(3) = 9.7e-88
Identities = 100/142 (70%), Positives = 120/142 (84%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVI+ATNRIE+LDPAL+RPGRIDRKIEFPLPD
Sbjct: 303 GGEREIQ-RTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDI 361
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KT+RRIF IHTS+MTLAEDVNL+E +M KD+ SGADIKAICTEAGL+ALRERRMKVT+ D
Sbjct: 362 KTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVD 421
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKK+KE V+++KKEG PEGLY+
Sbjct: 422 FKKAKEKVMFKKKEGVPEGLYM 443
Score = 395 (144.1 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 79/85 (92%), Positives = 83/85 (97%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN TSATFLRVVGSELIQKYLGDGPKLVRELFRVA++ +PSIVFIDEIDAVGTKRYD+
Sbjct: 241 AVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDA 300
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 301 NSGGEREIQRTMLELLNQLDGFDSR 325
Score = 259 (96.2 bits), Expect = 9.7e-88, Sum P(3) = 9.7e-88
Identities = 48/68 (70%), Positives = 61/68 (89%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKDQLEPGCS+L+++KV +VVG+L D+
Sbjct: 110 MSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDE 169
Query: 61 TDPMVTAV 68
DPMV+ +
Sbjct: 170 VDPMVSVM 177
Score = 138 (53.6 bits), Expect = 9.7e-88, Sum P(3) = 9.7e-88
Identities = 28/32 (87%), Positives = 29/32 (90%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVAN TSATFLRVVGSELIQKYLGDGPKL
Sbjct: 238 LAKAVANSTSATFLRVVGSELIQKYLGDGPKL 269
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 510 (184.6 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 99/142 (69%), Positives = 120/142 (84%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVI+ATNRIE+LDPAL+RPGRIDRKIEFPLPD
Sbjct: 303 GGEREIQ-RTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDI 361
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KT+RRIF IHTS+MTL+EDVNL+E +M KD+ SGADIKAICTEAGL+ALRERRMKVT+ D
Sbjct: 362 KTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPD 421
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKK+KE V+++KKEG PEGLY+
Sbjct: 422 FKKAKEKVMFKKKEGVPEGLYM 443
Score = 390 (142.3 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
Identities = 78/85 (91%), Positives = 83/85 (97%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN TSATFLRVVGSELIQKYLGDGPKLVRELFRVA++ +PSIVFIDEIDAVGTKRYD+
Sbjct: 241 AVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDA 300
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+SGGEREIQRTMLELLNQLDGFDSR
Sbjct: 301 HSGGEREIQRTMLELLNQLDGFDSR 325
Score = 259 (96.2 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 48/68 (70%), Positives = 61/68 (89%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSVG LEE+ID+NHAIVS+SVG E+YV ILSFVDKDQLEPGCS+L+++KV +VVG+L D+
Sbjct: 110 MSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDE 169
Query: 61 TDPMVTAV 68
DPMV+ +
Sbjct: 170 VDPMVSVM 177
Score = 138 (53.6 bits), Expect = 1.6e-87, Sum P(3) = 1.6e-87
Identities = 28/32 (87%), Positives = 29/32 (90%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVAN TSATFLRVVGSELIQKYLGDGPKL
Sbjct: 238 LAKAVANSTSATFLRVVGSELIQKYLGDGPKL 269
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 461 (167.3 bits), Expect = 5.8e-82, Sum P(3) = 5.8e-82
Identities = 90/142 (63%), Positives = 114/142 (80%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRI++LDPALIRPGRIDRKI+ P PD
Sbjct: 308 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDT 366
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTKRRIF IHTS+MT++ DV+L+E +M+KD+LSGADIKAICTEAGL+ALRERRMK+T D
Sbjct: 367 KTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQAD 426
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
+K+++ L++KK PEGLYL
Sbjct: 427 LRKARDKALFQKKGNIPEGLYL 448
Score = 402 (146.6 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 79/85 (92%), Positives = 84/85 (98%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+TSATFLRVVGSELIQKYLGDGPKLVRE+F+VAEEHAPSIVFIDEIDAVGTKRY++
Sbjct: 246 AVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEA 305
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
SGGEREIQRTMLELLNQLDGFDSR
Sbjct: 306 TSGGEREIQRTMLELLNQLDGFDSR 330
Score = 253 (94.1 bits), Expect = 5.8e-82, Sum P(3) = 5.8e-82
Identities = 46/68 (67%), Positives = 61/68 (89%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
+SVGTLEE+ID+NH I++TSVG E+YV+ILSFVDKD LEPGCSVLLN+K ++VVG+L D+
Sbjct: 115 VSVGTLEELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDE 174
Query: 61 TDPMVTAV 68
DP+V+ +
Sbjct: 175 VDPLVSVM 182
Score = 140 (54.3 bits), Expect = 5.8e-82, Sum P(3) = 5.8e-82
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVAN+TSATFLRVVGSELIQKYLGDGPKL
Sbjct: 243 LAKAVANETSATFLRVVGSELIQKYLGDGPKL 274
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 461 (167.3 bits), Expect = 5.8e-82, Sum P(3) = 5.8e-82
Identities = 90/142 (63%), Positives = 114/142 (80%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRI++LDPALIRPGRIDRKI+ P PD
Sbjct: 308 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDT 366
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTKRRIF IHTS+MT++ DV+L+E +M+KD+LSGADIKAICTEAGL+ALRERRMK+T D
Sbjct: 367 KTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQAD 426
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
+K+++ L++KK PEGLYL
Sbjct: 427 LRKARDKALFQKKGNIPEGLYL 448
Score = 402 (146.6 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 79/85 (92%), Positives = 84/85 (98%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+TSATFLRVVGSELIQKYLGDGPKLVRE+F+VAEEHAPSIVFIDEIDAVGTKRY++
Sbjct: 246 AVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEA 305
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
SGGEREIQRTMLELLNQLDGFDSR
Sbjct: 306 TSGGEREIQRTMLELLNQLDGFDSR 330
Score = 253 (94.1 bits), Expect = 5.8e-82, Sum P(3) = 5.8e-82
Identities = 46/68 (67%), Positives = 61/68 (89%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
+SVGTLEE+ID+NH I++TSVG E+YV+ILSFVDKD LEPGCSVLLN+K ++VVG+L D+
Sbjct: 115 VSVGTLEELIDENHGIIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDE 174
Query: 61 TDPMVTAV 68
DP+V+ +
Sbjct: 175 VDPLVSVM 182
Score = 140 (54.3 bits), Expect = 5.8e-82, Sum P(3) = 5.8e-82
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVAN+TSATFLRVVGSELIQKYLGDGPKL
Sbjct: 243 LAKAVANETSATFLRVVGSELIQKYLGDGPKL 274
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 426 (155.0 bits), Expect = 3.4e-76, Sum P(3) = 3.4e-76
Identities = 89/157 (56%), Positives = 115/157 (73%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G + +Q R + E+ + L GDVKVIMATN+IETLDPALIRP
Sbjct: 305 EIDAIGTKRYDSTSGGEREIQ-RTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRP 363
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GRIDRKI F PD+ TK++IF +HTS+M+L +DV+L E I KDDLSGADI+AICTEAGL
Sbjct: 364 GRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGL 423
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKEGTP-EGLYL 317
MALRERRM+V +DF+ ++E ++ K++G P EGLYL
Sbjct: 424 MALRERRMRVQMDDFRAARERIMKTKQDGGPVEGLYL 460
Score = 393 (143.4 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 76/85 (89%), Positives = 82/85 (96%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLR+VGSELIQKYLGDGP+LVR++F+VA EHAPSIVFIDEIDA+GTKRYDS
Sbjct: 257 AVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDS 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
SGGEREIQRTMLELLNQLDGFD R
Sbjct: 317 TSGGEREIQRTMLELLNQLDGFDDR 341
Score = 234 (87.4 bits), Expect = 3.4e-76, Sum P(3) = 3.4e-76
Identities = 43/68 (63%), Positives = 59/68 (86%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
M VG LEE+IDD+HAIVS++ G E+YVSI+SFVDKD LEPG S+LL+HK +VVGVL+++
Sbjct: 126 MGVGNLEELIDDDHAIVSSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVGVLTEE 185
Query: 61 TDPMVTAV 68
+DP+V+ +
Sbjct: 186 SDPLVSVM 193
Score = 139 (54.0 bits), Expect = 3.4e-76, Sum P(3) = 3.4e-76
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLR+VGSELIQKYLGDGP+L
Sbjct: 254 LAKAVANQTSATFLRIVGSELIQKYLGDGPRL 285
Score = 42 (19.8 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 131 VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ--RTMLEL 170
+ EE P +V + ++D T+ Y G E +IQ R +EL
Sbjct: 182 LTEESDP-LVSVMKLDKAPTESYADIGGLESQIQEVRESVEL 222
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 468 (169.8 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 99/142 (69%), Positives = 114/142 (80%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATNRI+TLDPAL + ++ PLPDE
Sbjct: 298 GGEREIQ-RTMLELLNQLDGFDSRGDVKVIMATNRIKTLDPALSHQAALTGRLS-PLPDE 355
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
KTK+ IF IHTSRMTLA+DV L +LIMAKDDLSGADIKAICTEAGLMALRE RMKVTNED
Sbjct: 356 KTKKHIFQIHTSRMTLADDVTL-DLIMAKDDLSGADIKAICTEAGLMALREHRMKVTNED 414
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FKKSKE+VLY+K+EGTPEGLYL
Sbjct: 415 FKKSKENVLYKKQEGTPEGLYL 436
Score = 403 (146.9 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 80/89 (89%), Positives = 84/89 (94%)
Query: 92 GPKLAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTK 151
G AVAN+TSATFLRV GSELIQKYLGDGPK+VRE FRVAEEHAPSIVFIDEIDA+GT+
Sbjct: 232 GTVKAVANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTR 291
Query: 152 RYDSNSGGEREIQRTMLELLNQLDGFDSR 180
RYDSNSGGEREIQRTMLELLNQLDGFDSR
Sbjct: 292 RYDSNSGGEREIQRTMLELLNQLDGFDSR 320
Score = 277 (102.6 bits), Expect = 7.6e-72, Sum P(2) = 7.6e-72
Identities = 55/68 (80%), Positives = 59/68 (86%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
MSV TLEEIID NH IVSTSVGSEHYVSILSFVDKD LEPGCS LLNHK+HAV+ V DD
Sbjct: 107 MSVVTLEEIIDGNHVIVSTSVGSEHYVSILSFVDKDLLEPGCSNLLNHKLHAVIVVFMDD 166
Query: 61 TDPMVTAV 68
TDP+VT +
Sbjct: 167 TDPLVTVM 174
Score = 135 (52.6 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 29/41 (70%), Positives = 32/41 (78%)
Query: 55 GVLSDDTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
GV+ V AVAN+TSATFLRV GSELIQKYLGDGPK+
Sbjct: 224 GVILYGPPGTVKAVANRTSATFLRVAGSELIQKYLGDGPKV 264
Score = 38 (18.4 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 135 HAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRVQ 182
HA +VF+D+ D + T ++++ E + G D+++Q
Sbjct: 157 HAVIVVFMDDTDPLVTVMK------VEKVEKAPQETYADIRGLDNQIQ 198
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 505 (182.8 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 102/156 (65%), Positives = 122/156 (78%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G + +Q R + E+ + L DVKVIMATNRIETLDPALIRP
Sbjct: 285 EIDAVGTKRYDSQSGGEREIQ-RTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRP 343
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GRIDRKIEFPLPD KTKR+IF IHT++M L+EDVNL+E +M+KDDLSGADIKAICTE+GL
Sbjct: 344 GRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGL 403
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL 317
+ALRERRM+VT+ DFKK+KE VLYRK G PEGLY+
Sbjct: 404 LALRERRMRVTHTDFKKAKEKVLYRKTAGAPEGLYM 439
Score = 400 (145.9 bits), Expect = 2.3e-58, Sum P(2) = 2.3e-58
Identities = 81/85 (95%), Positives = 83/85 (97%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA+E APSIVFIDEIDAVGTKRYDS
Sbjct: 237 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDS 296
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
SGGEREIQRTMLELLNQLDGFD+R
Sbjct: 297 QSGGEREIQRTMLELLNQLDGFDAR 321
Score = 217 (81.4 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 43/75 (57%), Positives = 57/75 (76%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
++VG LEEIIDDNHAIVS++VG EHYV I+SFVDK +L G +VLLN+K +VVGV+ +
Sbjct: 106 LTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGE 165
Query: 61 TDPMVTAVANQTSAT 75
DPMV + + + T
Sbjct: 166 VDPMVNVMKVEKAPT 180
Score = 143 (55.4 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLRVVGSELIQKYLGDGPKL
Sbjct: 234 LAKAVANQTSATFLRVVGSELIQKYLGDGPKL 265
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 422 (153.6 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 89/142 (62%), Positives = 107/142 (75%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GD+KVIMATN+IE+LDPALIRPGRIDRKI F PD
Sbjct: 301 GGEREIQ-RTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDA 359
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
TK++I IHTS+M+LA+DVNL E++ KDDLSGADIKAICTEAGL+ALRERRM+V ED
Sbjct: 360 NTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAED 419
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FK +KE VL K E EGL L
Sbjct: 420 FKSAKERVLKNKVEENLEGLNL 441
Score = 380 (138.8 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 72/85 (84%), Positives = 81/85 (95%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLR+VGSELIQKYLGDGP+L R++F++A +HAPSIVFIDEIDA+GTKRY+S
Sbjct: 239 AVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYES 298
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
SGGEREIQRTMLELLNQLDGFD R
Sbjct: 299 TSGGEREIQRTMLELLNQLDGFDDR 323
Score = 258 (95.9 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 51/75 (68%), Positives = 61/75 (81%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
M++GTLEEIIDD+HAIVS++ SE+YVSI+SFVDK LEPGCSVLL+HK AVVGVL DD
Sbjct: 108 MAIGTLEEIIDDDHAIVSSTASSEYYVSIMSFVDKGLLEPGCSVLLHHKTVAVVGVLQDD 167
Query: 61 TDPMVTAVANQTSAT 75
DPMV+ + S T
Sbjct: 168 ADPMVSVMKLDKSPT 182
Score = 139 (54.0 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLR+VGSELIQKYLGDGP+L
Sbjct: 236 LAKAVANQTSATFLRIVGSELIQKYLGDGPRL 267
Score = 39 (18.8 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 131 VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ 164
V ++ A +V + ++D T+ Y G E +IQ
Sbjct: 163 VLQDDADPMVSVMKLDKSPTESYADIGGLESQIQ 196
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 429 (156.1 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 90/142 (63%), Positives = 109/142 (76%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G + +Q R + E+ + L GDVKVIMATN+IETLDPALIRPGRIDRKI F PD
Sbjct: 297 GGEREIQ-RTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDL 355
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
TK++I IHTS+M L+EDVNL+ L+ KDDLSGADI+A+CTEAGL+ALRERRM+VT ED
Sbjct: 356 STKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAED 415
Query: 296 FKKSKESVLYRKKEGTPEGLYL 317
FK++KE V+ K E EGLYL
Sbjct: 416 FKQAKERVMKNKVEENLEGLYL 437
Score = 387 (141.3 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 75/85 (88%), Positives = 82/85 (96%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVANQTSATFLR+VGSELIQKYLGDGP+L R++F+VA E+APSIVFIDEIDA+GTKRYDS
Sbjct: 235 AVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDS 294
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
NSGGEREIQRTMLELLNQLDGFD R
Sbjct: 295 NSGGEREIQRTMLELLNQLDGFDDR 319
Score = 245 (91.3 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 47/75 (62%), Positives = 60/75 (80%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDD 60
+S+GTLEEIIDD+HAIV++ ++YVSILSFVDK+ LEPGCSVLL+HK ++VGVL DD
Sbjct: 104 LSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDD 163
Query: 61 TDPMVTAVANQTSAT 75
DPMV+ + S T
Sbjct: 164 ADPMVSVMKMDKSPT 178
Score = 139 (54.0 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVANQTSATFLR+VGSELIQKYLGDGP+L
Sbjct: 232 LAKAVANQTSATFLRIVGSELIQKYLGDGPRL 263
Score = 40 (19.1 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 131 VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ 164
V ++ A +V + ++D T+ Y G E +IQ
Sbjct: 159 VLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQ 192
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 304 (112.1 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 63/133 (47%), Positives = 86/133 (64%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
DS VQ R + E+ + L ++KVIMATNRI+ LDPAL+RPGRIDRKIEFP P +
Sbjct: 263 DSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEA 321
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH+ M L ++L+ + + SGA++K +CTEAG+ ALRERR+ VT EDF+
Sbjct: 322 RAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFE 381
Query: 298 KSKESVLYRKKEG 310
+ VL + G
Sbjct: 382 LAVAKVLNKGDSG 394
Score = 289 (106.8 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 54/85 (63%), Positives = 72/85 (84%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R DS
Sbjct: 198 AVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDS 257
Query: 156 NSG-GEREIQRTMLELLNQLDGFDS 179
+ G G+ E+QRTMLELLNQLDGF++
Sbjct: 258 SGGSGDSEVQRTMLELLNQLDGFEA 282
Score = 91 (37.1 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T F+RV GSEL+QKY+G+G ++
Sbjct: 195 LARAVAHHTDCKFIRVSGSELVQKYIGEGSRM 226
Score = 67 (28.6 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + N +V ++ V I +D +++P V L + + ++ +L + D
Sbjct: 69 VGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVD 128
Query: 63 PMVTA--VANQTSATFLRVVGSE 83
P+V+ V +T+ V G E
Sbjct: 129 PLVSLMMVEKIPDSTYEMVGGLE 151
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 304 (112.1 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 62/132 (46%), Positives = 90/132 (68%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
DS VQ R + E+ + L +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E++
Sbjct: 279 DSEVQ-RTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH+ +M L ++L+++ + SGA++KA+CTEAG+ ALRERR+ VT EDF+
Sbjct: 338 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 397
Query: 298 KSKESVLYRKKE 309
+ V+ + E
Sbjct: 398 MAVAKVMKKDTE 409
Score = 294 (108.6 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 55/85 (64%), Positives = 73/85 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R +S
Sbjct: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
Query: 156 NSG-GEREIQRTMLELLNQLDGFDS 179
SG G+ E+QRTMLELLNQLDGF++
Sbjct: 274 GSGNGDSEVQRTMLELLNQLDGFEA 298
Score = 97 (39.2 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QKY+G+G ++
Sbjct: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRM 242
Score = 61 (26.5 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +++ N +V ++ V I +D +L P V L + + + VL D
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVD 144
Query: 63 PMV 65
P+V
Sbjct: 145 PLV 147
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 304 (112.1 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 62/132 (46%), Positives = 90/132 (68%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
DS VQ R + E+ + L +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E++
Sbjct: 279 DSEVQ-RTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH+ +M L ++L+++ + SGA++KA+CTEAG+ ALRERR+ VT EDF+
Sbjct: 338 RFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFE 397
Query: 298 KSKESVLYRKKE 309
+ V+ + E
Sbjct: 398 MAVAKVMKKDTE 409
Score = 294 (108.6 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 55/85 (64%), Positives = 73/85 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R +S
Sbjct: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
Query: 156 NSG-GEREIQRTMLELLNQLDGFDS 179
SG G+ E+QRTMLELLNQLDGF++
Sbjct: 274 GSGNGDSEVQRTMLELLNQLDGFEA 298
Score = 97 (39.2 bits), Expect = 9.6e-41, Sum P(3) = 9.6e-41
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QKY+G+G ++
Sbjct: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRM 242
Score = 59 (25.8 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +++ N +V ++ V I +D ++ P V L + + + VL D
Sbjct: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVD 144
Query: 63 PMV 65
P+V
Sbjct: 145 PLV 147
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 293 (108.2 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 53/82 (64%), Positives = 70/82 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DA+GTKR+DS
Sbjct: 230 AVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS 289
Query: 156 NSGGEREIQRTMLELLNQLDGF 177
G+RE+QRTMLELLNQLDGF
Sbjct: 290 EKAGDREVQRTMLELLNQLDGF 311
Score = 288 (106.4 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 60/131 (45%), Positives = 83/131 (63%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L D+KVI ATNRI+ LDPAL+R GR+DRKIE P P+E
Sbjct: 294 DREVQ-RTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDA 352
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M + +DVN +EL DD +GA KA+C EAG++ALR ++ +EDF
Sbjct: 353 RARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFM 412
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 413 DAILEVQAKKK 423
Score = 92 (37.4 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
M AVA QT +TFL++ G +L+Q ++GDG KL
Sbjct: 227 MARAVAAQTKSTFLKLAGPQLVQMFIGDGAKL 258
Score = 73 (30.8 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS + +++ ++ VD D+L+PG V +N + ++ L + D V A+
Sbjct: 113 AVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAM 166
Score = 40 (19.1 bits), Expect = 7.1e-28, Sum P(2) = 7.1e-28
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 97 VANQTSAT-FLRVVGS-ELIQKYLGDGPKLVRELFRVAEE---HAPSIVFIDEIDAVGTK 151
+ T AT FL VVG + + GD + ++ + + E+ S V E+D T+
Sbjct: 115 IKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTE 174
Query: 152 RYDSNSGGEREIQ 164
+Y G +++IQ
Sbjct: 175 QYSDIGGCDKQIQ 187
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 293 (108.2 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 53/82 (64%), Positives = 70/82 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DA+GTKR+DS
Sbjct: 230 AVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS 289
Query: 156 NSGGEREIQRTMLELLNQLDGF 177
G+RE+QRTMLELLNQLDGF
Sbjct: 290 EKAGDREVQRTMLELLNQLDGF 311
Score = 288 (106.4 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 60/131 (45%), Positives = 83/131 (63%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L D+KVI ATNRI+ LDPAL+R GR+DRKIE P P+E
Sbjct: 294 DREVQ-RTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDA 352
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M + +DVN +EL DD +GA KA+C EAG++ALR ++ +EDF
Sbjct: 353 RARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFM 412
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 413 DAILEVQAKKK 423
Score = 92 (37.4 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
M AVA QT +TFL++ G +L+Q ++GDG KL
Sbjct: 227 MARAVAAQTKSTFLKLAGPQLVQMFIGDGAKL 258
Score = 73 (30.8 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS + +++ ++ VD D+L+PG V +N + ++ L + D V A+
Sbjct: 113 AVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAM 166
Score = 40 (19.1 bits), Expect = 7.1e-28, Sum P(2) = 7.1e-28
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 97 VANQTSAT-FLRVVGS-ELIQKYLGDGPKLVRELFRVAEE---HAPSIVFIDEIDAVGTK 151
+ T AT FL VVG + + GD + ++ + + E+ S V E+D T+
Sbjct: 115 IKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTE 174
Query: 152 RYDSNSGGEREIQ 164
+Y G +++IQ
Sbjct: 175 QYSDIGGCDKQIQ 187
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 294 (108.6 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 60/127 (47%), Positives = 83/127 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
DS VQ R + E+ + L ++K+IMATNR++ LDPAL+RPGRIDRKIEFP P +
Sbjct: 249 DSEVQ-RTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEA 307
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH+ M L +NL ++ + SGA++K +CTEAG+ ALRERR+ VT EDF
Sbjct: 308 RADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFD 367
Query: 298 KSKESVL 304
+ +L
Sbjct: 368 LATAKIL 374
Score = 289 (106.8 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 53/83 (63%), Positives = 69/83 (83%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R DS
Sbjct: 185 AVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDS 244
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
G+ E+QRTMLELLNQLDGF+
Sbjct: 245 AGSGDSEVQRTMLELLNQLDGFE 267
Score = 91 (37.1 bits), Expect = 3.8e-38, Sum P(3) = 3.8e-38
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T F+RV GSEL+QKY+G+G ++
Sbjct: 182 LARAVAHHTDCRFIRVSGSELVQKYIGEGSRM 213
Score = 50 (22.7 bits), Expect = 8.4e-59, Sum P(3) = 8.4e-59
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +++ +V ++ V I VD +L G V L + + +L D
Sbjct: 56 VGEVVKVMSTKKVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVD 115
Query: 63 PMVT 66
P+V+
Sbjct: 116 PLVS 119
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 270 (100.1 bits), Expect = 4.4e-56, Sum P(3) = 4.4e-56
Identities = 56/131 (42%), Positives = 83/131 (63%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + L G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E++
Sbjct: 256 DREIQ-RTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH S + +++ + ++ + +GAD++ ICTEAG+ A+R R V +EDF
Sbjct: 315 RMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFM 374
Query: 298 KSKESVLYRKK 308
K+ + KK
Sbjct: 375 KAVRKLSEAKK 385
Score = 257 (95.5 bits), Expect = 4.4e-56, Sum P(3) = 4.4e-56
Identities = 45/83 (54%), Positives = 63/83 (75%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A+ A FL+VV S +I KY+G+ +L+RE+F A EH P I+F+DEIDA+G +R+
Sbjct: 192 AIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSE 251
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+ +REIQRT++ELLNQLDGFD
Sbjct: 252 GTSADREIQRTLMELLNQLDGFD 274
Score = 80 (33.2 bits), Expect = 4.4e-56, Sum P(3) = 4.4e-56
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + +D+ IV S G + V S VDK++L G V+L+ ++ L + D
Sbjct: 63 IGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVD 122
Query: 63 PMV 65
P+V
Sbjct: 123 PVV 125
Score = 72 (30.4 bits), Expect = 8.6e-37, Sum P(3) = 8.6e-37
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A+A+ A FL+VV S +I KY+G+ +L
Sbjct: 189 LARAIASNIDANFLKVVSSAIIDKYIGESARL 220
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 272 (100.8 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 59/138 (42%), Positives = 87/138 (63%)
Query: 178 DSRVQNRRLSEVYSSLT-LIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 236
D +Q R L E+ + L YL G K+IMATNR +TLDPAL+R GR+DRKIE PLP+E
Sbjct: 254 DREIQ-RTLMELLNQLDGFDYL-GKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEV 311
Query: 237 TKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 296
+ I IH+S + + D++ + ++ D L+GAD++ + TEAGL A+++ R + +DF
Sbjct: 312 GRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDDF 371
Query: 297 KKSKESVLYRKK-EGTPE 313
++ V KK EG E
Sbjct: 372 NRAVRKVAEAKKLEGKLE 389
Score = 252 (93.8 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 44/83 (53%), Positives = 63/83 (75%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ FL+VV S ++ KY+G+ +L+RE+F A+EH P I+F+DEIDA+G +R+
Sbjct: 190 AVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSE 249
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+ +REIQRT++ELLNQLDGFD
Sbjct: 250 GTSADREIQRTLMELLNQLDGFD 272
Score = 78 (32.5 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + + +D+ IV S G + V S VD+ +L+ G V L+ ++ +L + D
Sbjct: 61 IGEVLKQLDEERFIVKASSGPRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVD 120
Query: 63 PMV 65
P+V
Sbjct: 121 PLV 123
Score = 68 (29.0 bits), Expect = 2.2e-36, Sum P(3) = 2.2e-36
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ FL+VV S ++ KY+G+ +L
Sbjct: 187 LARAVASSMETNFLKVVSSAIVDKYIGESARL 218
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 265 (98.3 bits), Expect = 1.8e-55, Sum P(3) = 1.8e-55
Identities = 55/131 (41%), Positives = 83/131 (63%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + L G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E++
Sbjct: 256 DREIQ-RTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH + + +++ + ++ + +GAD++ ICTEAG+ A+R R V +EDF
Sbjct: 315 RMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFM 374
Query: 298 KSKESVLYRKK 308
K+ + KK
Sbjct: 375 KAVRKLSEAKK 385
Score = 258 (95.9 bits), Expect = 1.8e-55, Sum P(3) = 1.8e-55
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A+ A FL+VV S +I KY+G+ +L+RE+F A EH P I+F+DEIDA+G +R+
Sbjct: 192 AIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSE 251
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+ +REIQRT++ELLNQLDGFD+
Sbjct: 252 GTSADREIQRTLMELLNQLDGFDN 275
Score = 80 (33.2 bits), Expect = 1.8e-55, Sum P(3) = 1.8e-55
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + +D+ IV S G + V S VDK++L G V+L+ ++ L + D
Sbjct: 63 IGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVD 122
Query: 63 PMV 65
P+V
Sbjct: 123 PVV 125
Score = 72 (30.4 bits), Expect = 4.5e-36, Sum P(3) = 4.5e-36
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A+A+ A FL+VV S +I KY+G+ +L
Sbjct: 189 LARAIASNIDANFLKVVSSAIIDKYIGESARL 220
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 310 (114.2 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 63/132 (47%), Positives = 88/132 (66%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E+
Sbjct: 259 DSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEA 317
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT EDF+
Sbjct: 318 RLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 377
Query: 298 KSKESVLYRKKE 309
+ V+ + E
Sbjct: 378 MAVSKVMMKDSE 389
Score = 278 (102.9 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 51/84 (60%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R ++
Sbjct: 196 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLET 255
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+G + E+QRTMLELLNQLDGF++
Sbjct: 256 GTG-DSEVQRTMLELLNQLDGFEA 278
Score = 93 (37.8 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 193 LARAVAHHTECTFIRVSGSELVQKFIGEGSRM 224
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 271 (100.5 bits), Expect = 7.9e-55, Sum P(3) = 7.9e-55
Identities = 55/131 (41%), Positives = 82/131 (62%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + G VK+IMATNR ++LDPAL+RPGR+DRKIE PLP+E+
Sbjct: 258 DREIQ-RTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQA 316
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH ++ +++ + ++ D+ +GAD++ +CTEAGL A+R R V DF
Sbjct: 317 RLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFM 376
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 377 KAVRKVSDNKK 387
Score = 261 (96.9 bits), Expect = 7.9e-55, Sum P(3) = 7.9e-55
Identities = 45/84 (53%), Positives = 65/84 (77%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q A FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 194 AVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 253
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+ +REIQRT++ELLNQ+DGFDS
Sbjct: 254 GTSADREIQRTLMELLNQMDGFDS 277
Score = 77 (32.2 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q A FL+VV S ++ KY+G+ +L
Sbjct: 191 LARAVASQLDANFLKVVSSAIVDKYIGESARL 222
Score = 63 (27.2 bits), Expect = 7.9e-55, Sum P(3) = 7.9e-55
Identities = 27/110 (24%), Positives = 56/110 (50%)
Query: 3 VG-TLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDT 61
VG L+++ +D + +T+ G + V +DK +L+ G V L+ ++ L +
Sbjct: 65 VGEVLKQLTEDKFIVKATN-GPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREV 123
Query: 62 DPMVTAVANQT--SATFLRVVG-SELIQKYLGDGPKLAVANQTSATFLRV 108
DP+V ++++ T+ + G ++ I++ L + +L + N FLRV
Sbjct: 124 DPLVYNMSHEDPGDVTYSAIGGLTDQIRE-LREVIELPLLNPE--LFLRV 170
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 261 (96.9 bits), Expect = 2.0e-54, Sum P(3) = 2.0e-54
Identities = 53/131 (40%), Positives = 82/131 (62%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + L G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+
Sbjct: 257 DREIQ-RTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQA 315
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ + IH + + +++ + ++ + +GAD++ +CTEAG+ A+R R V +EDF
Sbjct: 316 RMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFM 375
Query: 298 KSKESVLYRKK 308
K+ + KK
Sbjct: 376 KAVRKLNDAKK 386
Score = 251 (93.4 bits), Expect = 2.0e-54, Sum P(3) = 2.0e-54
Identities = 43/83 (51%), Positives = 63/83 (75%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A+ A FL++V S +I KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 193 AIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSE 252
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+ +REIQRT++ELLNQLDGFD
Sbjct: 253 GTSADREIQRTLMELLNQLDGFD 275
Score = 83 (34.3 bits), Expect = 2.0e-54, Sum P(3) = 2.0e-54
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + +D+ IV S G + V S VDK++L G V+L+ ++ L + D
Sbjct: 64 IGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVD 123
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQKYLGDGPKLAVANQTSATFLRV 108
P+V + ++ + ++ V G S+ I++ L + +L + N FLRV
Sbjct: 124 PVVYNMLHEDPGNVSYSAVGGLSDQIRE-LRESIELPLMNPE--LFLRV 169
Score = 71 (30.1 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A+A+ A FL++V S +I KY+G+ +L
Sbjct: 190 LARAIASNIDANFLKIVSSAIIDKYIGESARL 221
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 284 (105.0 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 61/137 (44%), Positives = 85/137 (62%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + L G+VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E
Sbjct: 254 DREIQ-RTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETA 312
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH ++MT D++ + + D +GAD++ +CTEAG+ A+R R V EDF
Sbjct: 313 RIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFY 372
Query: 298 KSKESVLYRKK-EGTPE 313
K+ + KK EG E
Sbjct: 373 KAARKISEGKKLEGKIE 389
Score = 238 (88.8 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 39/83 (46%), Positives = 63/83 (75%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A+ + F+R+V S ++ KY+G+ +++RE+F A+EH P I+F+DEIDA+G +R+
Sbjct: 190 AMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQ 249
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+ +REIQRT++ELLN LDGF+
Sbjct: 250 GTSADREIQRTLMELLNHLDGFE 272
Score = 64 (27.6 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + + ++D IV S G + V S ++K +L G V L+ V+ L + D
Sbjct: 55 IGQVLKQLEDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVD 114
Query: 63 PMV 65
P+V
Sbjct: 115 PLV 117
Score = 61 (26.5 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 9/32 (28%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A+A+ + F+R+V S ++ KY+G+ ++
Sbjct: 187 LARAMASNINCNFMRIVVSAIVDKYIGESARI 218
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 284 (105.0 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 61/137 (44%), Positives = 85/137 (62%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + L G+VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E
Sbjct: 254 DREIQ-RTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETA 312
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH ++MT D++ + + D +GAD++ +CTEAG+ A+R R V EDF
Sbjct: 313 RIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFY 372
Query: 298 KSKESVLYRKK-EGTPE 313
K+ + KK EG E
Sbjct: 373 KAARKISEGKKLEGKIE 389
Score = 238 (88.8 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 39/83 (46%), Positives = 63/83 (75%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A+ + F+R+V S ++ KY+G+ +++RE+F A+EH P I+F+DEIDA+G +R+
Sbjct: 190 AMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQ 249
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+ +REIQRT++ELLN LDGF+
Sbjct: 250 GTSADREIQRTLMELLNHLDGFE 272
Score = 64 (27.6 bits), Expect = 6.9e-54, Sum P(3) = 6.9e-54
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + + ++D IV S G + V S ++K +L G V L+ V+ L + D
Sbjct: 55 IGQVLKQLEDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVD 114
Query: 63 PMV 65
P+V
Sbjct: 115 PLV 117
Score = 61 (26.5 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 9/32 (28%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A+A+ + F+R+V S ++ KY+G+ ++
Sbjct: 187 LARAMASNINCNFMRIVVSAIVDKYIGESARI 218
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 316 (116.3 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 69/148 (46%), Positives = 98/148 (66%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 262 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRP 320
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR +F+ SRM L++DV+L++ + D +SGADI +IC EAG+
Sbjct: 321 GRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGM 380
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
A+RE R V +D +K+ ++V+ KK+
Sbjct: 381 QAVRENRYVVLTKDLEKAYKNVV--KKD 406
Score = 310 (114.2 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 54/83 (65%), Positives = 76/83 (91%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA T+A+F+RVVGSE +QKYLG+GP++VR++FR+A+E++PSI+FIDEIDA+ TKR+D+
Sbjct: 214 AVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDA 273
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR +LELLNQ+DGFD
Sbjct: 274 QTGADREVQRILLELLNQMDGFD 296
Score = 146 (56.5 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D NHAIV ++ GS +YV +LS +D++ L+PGCSV L+ +A+V VL + D
Sbjct: 85 IGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEAD 144
Query: 63 PMV 65
+
Sbjct: 145 SSI 147
Score = 107 (42.7 bits), Expect = 4.1e-52, Sum P(3) = 4.1e-52
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA T+A+F+RVVGSE +QKYLG+GP++
Sbjct: 211 LAKAVAANTAASFIRVVGSEFVQKYLGEGPRM 242
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 257 (95.5 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 56/134 (41%), Positives = 79/134 (58%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E
Sbjct: 254 DREIQ-RTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAG 312
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ + IH + +T DV+ + + D + AD++ +CTEAG+ A+R R V EDF
Sbjct: 313 RVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFM 372
Query: 298 KSKESVLYRKK-EG 310
K+ KK EG
Sbjct: 373 KAVRKCQEAKKLEG 386
Score = 246 (91.7 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 40/84 (47%), Positives = 64/84 (76%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A+ A FL+VV S ++ KY+G+ +++RE+F A +H P ++F+DEIDA+G +R+
Sbjct: 190 AIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSE 249
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+ +REIQRT++ELLNQ+DGFD+
Sbjct: 250 GTSADREIQRTLMELLNQMDGFDT 273
Score = 68 (29.0 bits), Expect = 4.1e-33, Sum P(3) = 4.1e-33
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A+A+ A FL+VV S ++ KY+G+ ++
Sbjct: 187 LARAIASNLEANFLKVVSSAIVDKYIGESARV 218
Score = 65 (27.9 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQL-EPGCSVLLNHKVHAVVGVLSDDT 61
+G + +D+ IV G + V ++ DK L PG V L+ ++ +L +
Sbjct: 60 IGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREV 119
Query: 62 DPMV 65
DP++
Sbjct: 120 DPII 123
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 311 (114.5 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 53/86 (61%), Positives = 76/86 (88%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDE+DA+ T R+D+
Sbjct: 208 AVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDA 267
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR ++ELLNQ+DGFD V
Sbjct: 268 QTGADREVQRILMELLNQMDGFDQTV 293
Score = 302 (111.4 bits), Expect = 5.6e-49, Sum P(3) = 5.6e-49
Identities = 61/123 (49%), Positives = 87/123 (70%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD
Sbjct: 270 GADREVQ-RILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 328
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ KR +F + TS+M L+++V+L++ + D +S A+I AIC EAG+ A+R+ R + +D
Sbjct: 329 RQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKD 388
Query: 296 FKK 298
F+K
Sbjct: 389 FEK 391
Score = 123 (48.4 bits), Expect = 5.6e-49, Sum P(3) = 5.6e-49
Identities = 23/67 (34%), Positives = 43/67 (64%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E++D N+ IV ++ GS +YV ILS ++++ L+P SV L+ +A+V VL + D
Sbjct: 79 IGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEAD 138
Query: 63 PMVTAVA 69
++ ++
Sbjct: 139 SSISLLS 145
Score = 114 (45.2 bits), Expect = 5.6e-49, Sum P(3) = 5.6e-49
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVAN T+A F+RVVGSE +QKYLG+GP++
Sbjct: 205 LAKAVANHTTAAFIRVVGSEFVQKYLGEGPRM 236
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 332 (121.9 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 72/156 (46%), Positives = 98/156 (62%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + L G D VQ R L ++ + + GDVK+I ATNR + LDPA++RP
Sbjct: 271 EIDAIAAKRTDALTGGDREVQ-RTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRP 329
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR DR IE P PDEK + I IHT +M LAEDVNL+E+ + GA++KAICTEAG+
Sbjct: 330 GRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGM 389
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLYL 317
A+RE R VT +DF+K+ E ++ +KK E +L
Sbjct: 390 NAIRELRDYVTMDDFRKAVEKIMEKKKVKVKEPAHL 425
Score = 289 (106.8 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 50/85 (58%), Positives = 76/85 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA +T+ATF+RVVGSEL++K++G+G LV+++F++A+E APSI+FIDEIDA+ KR D+
Sbjct: 223 AVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDA 282
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+RE+QRT+++LL ++DGFD+R
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFDAR 307
Score = 101 (40.6 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 18/32 (56%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA +T+ATF+RVVGSEL++K++G+G L
Sbjct: 220 LAKAVATETNATFIRVVGSELVKKFIGEGASL 251
Score = 97 (39.2 bits), Expect = 4.8e-48, Sum P(3) = 4.8e-48
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VGT+ + + + +V +S G V++ FV+ D L PG V LN + VV VL ++ D
Sbjct: 94 VGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKD 153
Score = 39 (18.8 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 53 VVGVLSDDTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVV 109
+VG + D V + T +FL V + L G ++ + NQ + T + V+
Sbjct: 93 IVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCL-NQQTLTVVDVL 148
Score = 39 (18.8 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 79 VVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGDGPK--LVRELFRVAE--- 133
+VG+ ++ K +G+ K+ V + T +FL V + L G + L ++ V +
Sbjct: 93 IVGT-VVDK-VGER-KVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLP 149
Query: 134 EHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ--RTMLEL 170
E+ E+D RY+ G E+++Q R ++EL
Sbjct: 150 ENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVEL 188
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 375 (137.1 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 75/139 (53%), Positives = 102/139 (73%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+ VQ R L E+ + L GDVK+IMATNRI++LDPALIRPGRIDRKIE P PDEKT
Sbjct: 300 EQEVQ-RTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKT 358
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+++IF IHTS MT+ + V + ++ + +SGA+IKA+CTEAG++ALR +R V +DF+
Sbjct: 359 RQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFE 418
Query: 298 KSKESVLYRKKEGTPEGLY 316
K+ +SV+ KK G PEG +
Sbjct: 419 KAVKSVMLSKKGGAPEGFF 437
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 60/85 (70%), Positives = 77/85 (90%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN TSATF+R GS+L+QK G+G +LVR++F++A+E APSIVFIDEIDAVGTKR+D+
Sbjct: 236 AVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDT 295
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+S GE+E+QRT+LELLNQLDGF+SR
Sbjct: 296 SSRGEQEVQRTLLELLNQLDGFESR 320
Score = 95 (38.5 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVAN TSATF+R GS+L+QK G+G +L
Sbjct: 233 LAKAVANSTSATFIRATGSDLVQKQSGEGARL 264
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 325 (119.5 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 66/134 (49%), Positives = 90/134 (67%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LDPAL+RPGRIDRKIEFP PDE
Sbjct: 274 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDE 332
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
K + I IH+ +M L +N+ ++ SGA++K++CTEAG+ ALRERR+ VT ED
Sbjct: 333 KARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQED 392
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 393 FEMAVGKVMQKDSE 406
Score = 297 (109.6 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 73/84 (86%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 212 AVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEG 271
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+SGG+ E+QRTMLELLNQLDGF++
Sbjct: 272 SSGGDSEVQRTMLELLNQLDGFEA 295
Score = 93 (37.8 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 209 LARAVAHHTECTFIRVSGSELVQKFIGEGARM 240
Score = 62 (26.9 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + +D +V ++ V + +D + L G V L +A+ +L + D
Sbjct: 83 VGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVD 142
Query: 63 PMVT 66
P+V+
Sbjct: 143 PLVS 146
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 319 (117.4 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 65/134 (48%), Positives = 90/134 (67%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LDPAL+RPGRIDRKIEFP P+E
Sbjct: 263 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNE 321
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 322 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 381
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 382 FEMAVAKVMQKDSE 395
Score = 300 (110.7 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 54/84 (64%), Positives = 73/84 (86%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +S
Sbjct: 201 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIES 260
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 261 GSGGDSEVQRTMLELLNQLDGFEA 284
Score = 93 (37.8 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 198 LARAVAHHTECTFIRVSGSELVQKFIGEGSRM 229
Score = 63 (27.2 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + +D +V + V + +D + + P C V L ++ + + +L + D
Sbjct: 72 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVD 131
Query: 63 PMVT 66
P+V+
Sbjct: 132 PLVS 135
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 315 (115.9 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP PDE
Sbjct: 290 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDE 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
K + +I IH+ +M L + + ++ SGA++K++CTEAG+ ALRERR+ VT ED
Sbjct: 349 KARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQED 408
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 409 FEMAVGKVMQKDSE 422
Score = 292 (107.8 bits), Expect = 9.0e-31, Sum P(2) = 9.0e-31
Identities = 52/84 (61%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 228 AVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEG 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+ GG+ E+QRTMLELLNQLDGF++
Sbjct: 288 SRGGDSEVQRTMLELLNQLDGFEA 311
Score = 93 (37.8 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 225 LARAVAHHTECTFIRVSGSELVQKFIGEGARM 256
Score = 63 (27.2 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + +D +V ++ V + + VD L G V L +A+ VL D
Sbjct: 99 VGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVD 158
Query: 63 PMVT 66
P+V+
Sbjct: 159 PLVS 162
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 311 (114.5 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 264 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 383 FEMAVAKVMQKDSE 396
Score = 296 (109.3 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 202 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 261
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEA 285
Score = 93 (37.8 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 230
Score = 67 (28.6 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + ++D +V + V + +D + + P C V L + + + +L + D
Sbjct: 73 VGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query: 63 PMVT 66
P+V+
Sbjct: 133 PLVS 136
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 311 (114.5 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 272 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 330
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 331 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 390
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 391 FEMAVAKVMQKDSE 404
Score = 296 (109.3 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 210 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 269
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 270 GSGGDSEVQRTMLELLNQLDGFEA 293
Score = 93 (37.8 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 207 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 238
Score = 64 (27.6 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V I +D + + P C V L + + + +L + D
Sbjct: 81 VGEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 140
Query: 63 PMVT 66
P+V+
Sbjct: 141 PLVS 144
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 311 (114.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 270 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 328
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 329 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 388
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 389 FEMAVAKVMQKDSE 402
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 208 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 267
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 268 GSGGDSEVQRTMLELLNQLDGFEA 291
Score = 93 (37.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 205 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 236
Score = 63 (27.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 79 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 138
Query: 63 PMVT 66
P+V+
Sbjct: 139 PLVS 142
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 311 (114.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 264 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 383 FEMAVAKVMQKDSE 396
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 202 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 261
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEA 285
Score = 93 (37.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 230
Score = 63 (27.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query: 63 PMVT 66
P+V+
Sbjct: 133 PLVS 136
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 311 (114.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 264 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 383 FEMAVAKVMQKDSE 396
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 202 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 261
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEA 285
Score = 93 (37.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 230
Score = 63 (27.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query: 63 PMVT 66
P+V+
Sbjct: 133 PLVS 136
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 311 (114.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 264 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 383 FEMAVAKVMQKDSE 396
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 202 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 261
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEA 285
Score = 93 (37.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 230
Score = 63 (27.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query: 63 PMVT 66
P+V+
Sbjct: 133 PLVS 136
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 311 (114.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 272 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 330
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 331 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 390
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 391 FEMAVAKVMQKDSE 404
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 210 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 269
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 270 GSGGDSEVQRTMLELLNQLDGFEA 293
Score = 93 (37.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 207 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 238
Score = 63 (27.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 81 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 140
Query: 63 PMVT 66
P+V+
Sbjct: 141 PLVS 144
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 311 (114.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 264 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 383 FEMAVAKVMQKDSE 396
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 202 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 261
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEA 285
Score = 93 (37.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 230
Score = 63 (27.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query: 63 PMVT 66
P+V+
Sbjct: 133 PLVS 136
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 311 (114.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 264 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 383 FEMAVAKVMQKDSE 396
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 202 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 261
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEA 285
Score = 93 (37.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 230
Score = 63 (27.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query: 63 PMVT 66
P+V+
Sbjct: 133 PLVS 136
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 311 (114.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KVIMATNRI+ LD AL+RPGRIDRKIEFP P+E
Sbjct: 264 GGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNE 322
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ ALRERR+ VT ED
Sbjct: 323 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 382
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 383 FEMAVAKVMQKDSE 396
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 202 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 261
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEA 285
Score = 93 (37.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 199 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 230
Score = 63 (27.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 132
Query: 63 PMVT 66
P+V+
Sbjct: 133 PLVS 136
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 324 (119.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 70/148 (47%), Positives = 101/148 (68%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 266 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRP 324
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D +SGADI +IC E+G+
Sbjct: 325 GRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGM 384
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
+A+RE R V +DF+K+ ++V+ +K E
Sbjct: 385 LAVRENRYIVLAKDFEKAYKTVI-KKDE 411
Score = 316 (116.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/86 (63%), Positives = 77/86 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 218 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 277
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD V
Sbjct: 278 QTGADREVQRILLELLNQMDGFDQNV 303
Score = 128 (50.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N AIV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 63 PMVTAV-ANQTSATFLRVVGSELIQK 87
+ + ++Q +G IQK
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQK 174
Score = 109 (43.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A F+RVVGSE +QKYLG+GP++
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 246
Score = 39 (18.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 54 VGVL---SDDTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVG 110
+G+L + D P ++ QT +FL +L Y KL Q FL
Sbjct: 4 IGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLY-SRYKKL----QQELEFL---- 54
Query: 111 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG--GEREIQRTML 168
E+ ++Y+ D K +++ F A+E I I + + D N+ G +
Sbjct: 55 -EVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYV 113
Query: 169 ELLNQLD 175
+L+ +D
Sbjct: 114 RILSTID 120
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 324 (119.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 70/148 (47%), Positives = 101/148 (68%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 266 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRP 324
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D +SGADI +IC E+G+
Sbjct: 325 GRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGM 384
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
+A+RE R V +DF+K+ ++V+ +K E
Sbjct: 385 LAVRENRYIVLAKDFEKAYKTVI-KKDE 411
Score = 316 (116.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/86 (63%), Positives = 77/86 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 218 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 277
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD V
Sbjct: 278 QTGADREVQRILLELLNQMDGFDQNV 303
Score = 128 (50.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N AIV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 63 PMVTAV-ANQTSATFLRVVGSELIQK 87
+ + ++Q +G IQK
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQK 174
Score = 109 (43.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A F+RVVGSE +QKYLG+GP++
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 246
Score = 39 (18.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 54 VGVL---SDDTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVG 110
+G+L + D P ++ QT +FL +L Y KL Q FL
Sbjct: 4 IGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLY-SRYKKL----QQELEFL---- 54
Query: 111 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG--GEREIQRTML 168
E+ ++Y+ D K +++ F A+E I I + + D N+ G +
Sbjct: 55 -EVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYV 113
Query: 169 ELLNQLD 175
+L+ +D
Sbjct: 114 RILSTID 120
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 324 (119.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 70/148 (47%), Positives = 101/148 (68%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 266 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRP 324
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D +SGADI +IC E+G+
Sbjct: 325 GRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGM 384
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
+A+RE R V +DF+K+ ++V+ +K E
Sbjct: 385 LAVRENRYIVLAKDFEKAYKTVI-KKDE 411
Score = 316 (116.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/86 (63%), Positives = 77/86 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 218 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 277
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD V
Sbjct: 278 QTGADREVQRILLELLNQMDGFDQNV 303
Score = 128 (50.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N AIV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 63 PMVTAV-ANQTSATFLRVVGSELIQK 87
+ + ++Q +G IQK
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQK 174
Score = 109 (43.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A F+RVVGSE +QKYLG+GP++
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 246
Score = 39 (18.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 54 VGVL---SDDTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVG 110
+G+L + D P ++ QT +FL +L Y KL Q FL
Sbjct: 4 IGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLY-SRYKKL----QQELEFL---- 54
Query: 111 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG--GEREIQRTML 168
E+ ++Y+ D K +++ F A+E I I + + D N+ G +
Sbjct: 55 -EVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYV 113
Query: 169 ELLNQLD 175
+L+ +D
Sbjct: 114 RILSTID 120
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 324 (119.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 70/148 (47%), Positives = 101/148 (68%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 266 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRP 324
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D +SGADI +IC E+G+
Sbjct: 325 GRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGM 384
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
+A+RE R V +DF+K+ ++V+ +K E
Sbjct: 385 LAVRENRYIVLAKDFEKAYKTVI-KKDE 411
Score = 316 (116.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/86 (63%), Positives = 77/86 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 218 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 277
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD V
Sbjct: 278 QTGADREVQRILLELLNQMDGFDQNV 303
Score = 128 (50.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N AIV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 63 PMVTAV-ANQTSATFLRVVGSELIQK 87
+ + ++Q +G IQK
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQK 174
Score = 109 (43.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A F+RVVGSE +QKYLG+GP++
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 246
Score = 39 (18.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 54 VGVL---SDDTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVG 110
+G+L + D P ++ QT +FL +L Y KL Q FL
Sbjct: 4 IGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLY-SRYKKL----QQELEFL---- 54
Query: 111 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG--GEREIQRTML 168
E+ ++Y+ D K +++ F A+E I I + + D N+ G +
Sbjct: 55 -EVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYV 113
Query: 169 ELLNQLD 175
+L+ +D
Sbjct: 114 RILSTID 120
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 324 (119.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 70/148 (47%), Positives = 101/148 (68%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 266 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRP 324
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D +SGADI +IC E+G+
Sbjct: 325 GRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGM 384
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
+A+RE R V +DF+K+ ++V+ +K E
Sbjct: 385 LAVRENRYIVLAKDFEKAYKTVI-KKDE 411
Score = 316 (116.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/86 (63%), Positives = 77/86 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 218 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 277
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD V
Sbjct: 278 QTGADREVQRILLELLNQMDGFDQNV 303
Score = 128 (50.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N AIV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 63 PMVTAV-ANQTSATFLRVVGSELIQK 87
+ + ++Q +G IQK
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQK 174
Score = 109 (43.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A F+RVVGSE +QKYLG+GP++
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 246
Score = 38 (18.4 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 54 VGVLSD---DTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVG 110
+G+L + D P ++ QT +FL +L Y KL Q FL
Sbjct: 4 IGILVEKIQDEIPALSVSRPQTGLSFLGPEPEDLEDLY-SRYKKL----QQELEFL---- 54
Query: 111 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG--GEREIQRTML 168
E+ ++Y+ D K +++ F A+E I I + + D N+ G +
Sbjct: 55 -EVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYV 113
Query: 169 ELLNQLD 175
+L+ +D
Sbjct: 114 RILSTID 120
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 324 (119.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 70/148 (47%), Positives = 101/148 (68%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 266 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRP 324
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D +SGADI +IC E+G+
Sbjct: 325 GRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGM 384
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
+A+RE R V +DF+K+ ++V+ +K E
Sbjct: 385 LAVRENRYIVLAKDFEKAYKTVI-KKDE 411
Score = 316 (116.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/86 (63%), Positives = 77/86 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 218 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 277
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD V
Sbjct: 278 QTGADREVQRILLELLNQMDGFDQNV 303
Score = 128 (50.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N AIV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 63 PMVTAV-ANQTSATFLRVVGSELIQK 87
+ + ++Q +G IQK
Sbjct: 149 SSIMMLTSDQKPDVMYADIGGMDIQK 174
Score = 109 (43.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A F+RVVGSE +QKYLG+GP++
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 246
Score = 38 (18.4 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 54 VGVLSD---DTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVG 110
+G+L + D P ++ QT +FL +L Y KL Q FL
Sbjct: 4 IGILVEKIQDEIPALSVSRPQTGLSFLGPEPEDLEDLY-SRYKKL----QQELEFL---- 54
Query: 111 SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG--GEREIQRTML 168
E+ ++Y+ D K +++ F A+E I I + + D N+ G +
Sbjct: 55 -EVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYV 113
Query: 169 ELLNQLD 175
+L+ +D
Sbjct: 114 RILSTID 120
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 324 (119.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 70/148 (47%), Positives = 101/148 (68%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 265 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRP 323
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR IF+ TS+M L+E+V+L++ + D +SGADI +IC E+G+
Sbjct: 324 GRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGM 383
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
+A+RE R V +DF+K+ ++V+ +K E
Sbjct: 384 LAVRENRYIVLAKDFEKAYKTVI-KKDE 410
Score = 316 (116.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/86 (63%), Positives = 77/86 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 217 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 276
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD V
Sbjct: 277 QTGADREVQRILLELLNQMDGFDQNV 302
Score = 128 (50.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N AIV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 88 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 147
Query: 63 PMVTAV-ANQTSATFLRVVGSELIQK 87
+ + ++Q +G IQK
Sbjct: 148 SSIMMLTSDQKPDVMYADIGGMDIQK 173
Score = 109 (43.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A F+RVVGSE +QKYLG+GP++
Sbjct: 214 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 245
Score = 37 (18.1 bits), Expect = 1.8e-31, Sum P(2) = 1.8e-31
Identities = 26/125 (20%), Positives = 50/125 (40%)
Query: 54 VGVLSDDTDPMVTAVANQTSATFLRVVGS-ELIQKYLGDGPKLAVANQTSATFLRVVGSE 112
+G+L + + A++ T L +G E ++ KL Q FL E
Sbjct: 4 IGILVEKAQDEIPALSVSRPQTGLSFLGEPEDLEDLYSRYKKL----QQELEFL-----E 54
Query: 113 LIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG--GEREIQRTMLEL 170
+ ++Y+ D K +++ F A+E I I + + D N+ G + +
Sbjct: 55 VQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRI 114
Query: 171 LNQLD 175
L+ +D
Sbjct: 115 LSTID 119
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 316 (116.3 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 64/135 (47%), Positives = 88/135 (65%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L D+K+IMATNR++ LDPAL+RPGRIDRKIEFP P
Sbjct: 259 GGDSEVQ-RTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTV 317
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ I IH+ M L +NL+++ + SGAD+K +CTEAG+ ALRERR+ VT ED
Sbjct: 318 AARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQED 377
Query: 296 FKKSKESVLYRKKEG 310
F+ + V+ + +G
Sbjct: 378 FELAVAKVMSKNDDG 392
Score = 298 (110.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 54/84 (64%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 197 AVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEG 256
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+SGG+ E+QRTMLELLNQLDGF+S
Sbjct: 257 SSGGDSEVQRTMLELLNQLDGFES 280
Score = 91 (37.1 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T F+RV GSEL+QKY+G+G ++
Sbjct: 194 LARAVAHHTECKFIRVSGSELVQKYIGEGSRM 225
Score = 55 (24.4 bits), Expect = 5.9e-41, Sum P(3) = 5.9e-41
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +++ +V + V++ +D +L P V L H + +L D
Sbjct: 68 VGEVVKVMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVD 127
Query: 63 PMVT 66
P+V+
Sbjct: 128 PLVS 131
Score = 37 (18.1 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 9/46 (19%), Positives = 24/46 (52%)
Query: 127 ELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ--RTMLEL 170
+L+++ +V + ++ V YD G +++I+ + ++EL
Sbjct: 117 DLYKILPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIEL 162
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 327 (120.2 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 72/148 (48%), Positives = 98/148 (66%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 261 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRP 319
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR +F+ TS+M L+EDV+L+E + D +SGADI AIC EAG+
Sbjct: 320 GRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGM 379
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
A+RE R V +DF+K ++ + +K E
Sbjct: 380 HAVRENRYIVLAKDFEKGYKNNI-KKDE 406
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 54/83 (65%), Positives = 77/83 (92%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A+F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 213 AVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 272
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR +LELLNQ+DGFD
Sbjct: 273 QTGADREVQRILLELLNQMDGFD 295
Score = 123 (48.4 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 36/154 (23%), Positives = 75/154 (48%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N IV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 84 IGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEAD 143
Query: 63 PMVTAVA--NQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
++ + + ++ + G ++ ++ + + +L + T + +G + + L
Sbjct: 144 SSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPL---THFELYKQIGIDPPRGVLMY 200
Query: 121 GPK-LVRELFRVAEEHAPSIVFIDEIDAVGTKRY 153
GP + + A H + FI + + ++Y
Sbjct: 201 GPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKY 234
Score = 110 (43.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 19/32 (59%), Positives = 28/32 (87%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A+F+RVVGSE +QKYLG+GP++
Sbjct: 210 LAKAVAHHTTASFIRVVGSEFVQKYLGEGPRM 241
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 302 (111.4 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 62/134 (46%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++KV+M TNRI+ LDPAL+RPGRIDRKIEFP P +
Sbjct: 261 GGDSEVQ-RTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGD 319
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ I IH+ +M L +NL+++ + SGA++KA+CTEAG+ ALRERR+ V+ ED
Sbjct: 320 AGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQED 379
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + E
Sbjct: 380 FEMAVSKVMKKDSE 393
Score = 296 (109.3 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 56/85 (65%), Positives = 73/85 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R +S
Sbjct: 198 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGES 257
Query: 156 NSGG-EREIQRTMLELLNQLDGFDS 179
SGG + E+QRTMLELLNQLDGF+S
Sbjct: 258 GSGGGDSEVQRTMLELLNQLDGFES 282
Score = 97 (39.2 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QKY+G+G ++
Sbjct: 195 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRM 226
Score = 59 (25.8 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 15/64 (23%), Positives = 30/64 (46%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
V + +++ N +V + + V I VD +L P L H+ + + +L + D
Sbjct: 69 VAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKID 128
Query: 63 PMVT 66
P+V+
Sbjct: 129 PLVS 132
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 313 (115.2 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 63/134 (47%), Positives = 89/134 (66%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G DS VQ R + E+ + L ++K+IMATNR++ LDPAL+RPGRIDRKIEFP P
Sbjct: 263 GGDSEVQ-RTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSV 321
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ I IH+ +M L +NL+++ + SGAD+K +CTEAG+ ALRERR+ VT ED
Sbjct: 322 AARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQED 381
Query: 296 FKKSKESVLYRKKE 309
F+ + V+ + +E
Sbjct: 382 FELAVGKVMNKNQE 395
Score = 287 (106.1 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 51/84 (60%), Positives = 71/84 (84%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T F+RV G+EL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 201 AVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEG 260
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+ GG+ E+QRTMLELLNQLDGF++
Sbjct: 261 SGGGDSEVQRTMLELLNQLDGFET 284
Score = 88 (36.0 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T F+RV G+EL+QKY+G+G ++
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRM 229
Score = 56 (24.8 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +I+ D +V ++ V + ++ L+ V L + + VL + D
Sbjct: 72 VGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKAD 131
Query: 63 PMVT 66
P+V+
Sbjct: 132 PLVS 135
Score = 40 (19.1 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 128 LFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQ--RTMLEL 170
L +V E A +V + ++ V YD G ++I+ + ++EL
Sbjct: 122 LHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIEL 166
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 318 (117.0 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 69/148 (46%), Positives = 100/148 (67%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+ P
Sbjct: 266 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCP 324
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR +F+ TS+M L+E+V+L++ + D +SGADI +IC EAG+
Sbjct: 325 GRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGM 384
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKE 309
+A+RE R V +DF+K+ ++V+ +K E
Sbjct: 385 LAVRENRYIVLAKDFEKAYKTVI-KKDE 411
Score = 316 (116.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/86 (63%), Positives = 77/86 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 218 AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDA 277
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD V
Sbjct: 278 QTGADREVQRILLELLNQMDGFDQNV 303
Score = 128 (50.1 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N AIV ++ GS +YV ILS +D++ L+P SV L+ +A+V VL + D
Sbjct: 89 IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEAD 148
Query: 63 PMVTAV-ANQTSATFLRVVGSELIQK 87
+ + ++Q +G IQK
Sbjct: 149 SSIMMLTSDQKPDVLYSDIGGMDIQK 174
Score = 109 (43.4 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T+A F+RVVGSE +QKYLG+GP++
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 246
Score = 39 (18.8 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 28/123 (22%), Positives = 48/123 (39%)
Query: 55 GVLSDDTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELI 114
GVL + V A+ N T L + E + L D + Q FL E+
Sbjct: 5 GVLVEKPQDDVPALLNSRPQTGLSFLAPE--PEDLEDLYSIYKKLQQELEFL-----EVQ 57
Query: 115 QKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG--GEREIQRTMLELLN 172
++Y+ D K +++ F A+E I I + + D N+ G + +L+
Sbjct: 58 EEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILS 117
Query: 173 QLD 175
+D
Sbjct: 118 TID 120
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 317 (116.6 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 73/153 (47%), Positives = 96/153 (62%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + ++KVIMATNR +TLDPAL+RP
Sbjct: 253 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRP 311
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIE PLPD + KR +F TS+M + EDV+L+++I D +S ADI AIC EAG+
Sbjct: 312 GRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGM 371
Query: 282 MALRERRMKVTNEDFKKS-KESVLYRKKEGTPE 313
A+RE R V +DF+K K SV RK E E
Sbjct: 372 HAVRENRYVVNAKDFEKGYKTSV--RKDEAQHE 402
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 54/83 (65%), Positives = 77/83 (92%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T+A+F+RVVGSE +QKYLG+GP++VR+LFR+A++++PSI+FIDEIDA+ TKR+D+
Sbjct: 205 AVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDA 264
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR +LELLNQ+DGFD
Sbjct: 265 QTGADREVQRILLELLNQMDGFD 287
Score = 128 (50.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 39/174 (22%), Positives = 88/174 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D+N+ IV+++ GS +YV +LS +D++QL+P SV L+ + + +V ++ + D
Sbjct: 76 IGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEAD 135
Query: 63 PMVTAVA--NQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
++ ++ + ++ + G ++ ++ + + +L + T A + +G + + L
Sbjct: 136 STISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPL---THAQLYKQIGIDPPRGVLLF 192
Query: 121 GPK-LVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQ 173
GP + + A H + FI + + ++Y G R + R + L Q
Sbjct: 193 GPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGE--GPRMV-RDLFRLAKQ 243
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 296 (109.3 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 268 DREVQ-RTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 326
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 327 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYM 386
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 387 EGILEVQAKKK 397
Score = 292 (107.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 54/87 (62%), Positives = 69/87 (79%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+G KR+DS
Sbjct: 204 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDS 263
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 264 EKAGDREVQRTMLELLNQLDGFQPTTQ 290
Score = 87 (35.7 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 201 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 232
Score = 71 (30.1 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 87 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 140
Score = 38 (18.4 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 84 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 143
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 144 ERPTEQYSDIGGLDKQIQ 161
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 298 (110.0 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 197 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 256
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 257 EKAGDREVQRTMLELLNQLDGFQPNTQ 283
Score = 295 (108.9 bits), Expect = 5.1e-40, Sum P(3) = 5.1e-40
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 261 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 319
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 320 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 379
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 380 EGILEVQAKKK 390
Score = 87 (35.7 bits), Expect = 5.1e-40, Sum P(3) = 5.1e-40
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 194 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 225
Score = 71 (30.1 bits), Expect = 5.1e-40, Sum P(3) = 5.1e-40
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 80 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 133
Score = 38 (18.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 77 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 136
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 137 ERPTEQYSDIGGLDKQIQ 154
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 298 (110.0 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQ 325
Score = 295 (108.9 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 303 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 422 EGILEVQAKKK 432
Score = 87 (35.7 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 236 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 267
Score = 71 (30.1 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 122 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 175
Score = 38 (18.4 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 119 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 178
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 179 ERPTEQYSDIGGLDKQIQ 196
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 298 (110.0 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQ 325
Score = 295 (108.9 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 303 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 422 EGILEVQAKKK 432
Score = 87 (35.7 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 236 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 267
Score = 71 (30.1 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 122 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 175
Score = 38 (18.4 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 119 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 178
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 179 ERPTEQYSDIGGLDKQIQ 196
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 298 (110.0 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 239 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 298
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 299 EKAGDREVQRTMLELLNQLDGFQPNTQ 325
Score = 295 (108.9 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 303 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 422 EGILEVQAKKK 432
Score = 87 (35.7 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 236 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 267
Score = 71 (30.1 bits), Expect = 8.1e-40, Sum P(3) = 8.1e-40
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 122 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 175
Score = 38 (18.4 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 119 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 178
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 179 ERPTEQYSDIGGLDKQIQ 196
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 298 (110.0 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 242 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 301
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQ 328
Score = 295 (108.9 bits), Expect = 1.0e-39, Sum P(3) = 1.0e-39
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 306 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 364
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 365 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 424
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 425 EGILEVQAKKK 435
Score = 87 (35.7 bits), Expect = 1.0e-39, Sum P(3) = 1.0e-39
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 239 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 270
Score = 71 (30.1 bits), Expect = 1.0e-39, Sum P(3) = 1.0e-39
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 125 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 178
Score = 38 (18.4 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 122 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 181
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 182 ERPTEQYSDIGGLDKQIQ 199
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 298 (110.0 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 242 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 301
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 302 EKAGDREVQRTMLELLNQLDGFQPNTQ 328
Score = 295 (108.9 bits), Expect = 1.0e-39, Sum P(3) = 1.0e-39
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 306 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 364
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 365 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 424
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 425 EGILEVQAKKK 435
Score = 87 (35.7 bits), Expect = 1.0e-39, Sum P(3) = 1.0e-39
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 239 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 270
Score = 71 (30.1 bits), Expect = 1.0e-39, Sum P(3) = 1.0e-39
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 125 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 178
Score = 38 (18.4 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 122 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 181
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 182 ERPTEQYSDIGGLDKQIQ 199
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 305 (112.4 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 64/137 (46%), Positives = 92/137 (67%)
Query: 172 NQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 231
++L G D VQ R + E+ + L VKVI ATNR +TLDPAL+R GR+DRKIE P
Sbjct: 298 SELSG-DREVQ-RTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELP 355
Query: 232 LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKV 291
P+E+++ RI IH+ +M + +DVN +EL + DD +GA +KA+C EAG++ALR ++
Sbjct: 356 HPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEI 415
Query: 292 TNEDFKKSKESVLYRKK 308
+EDF + SVL +KK
Sbjct: 416 DHEDFVEGITSVLSKKK 432
Score = 293 (108.2 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 52/84 (61%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A+QT+ATFL++ G +L+Q ++GDG K+VR+ F +A+E AP+I+FIDE+DA+GTKR+DS
Sbjct: 239 ACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDS 298
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
G+RE+QRTMLELLNQLDGF +
Sbjct: 299 ELSGDREVQRTMLELLNQLDGFST 322
Score = 89 (36.4 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A+QT+ATFL++ G +L+Q ++GDG K+
Sbjct: 236 LARACASQTNATFLKLAGPQLVQMFIGDGAKM 267
Score = 56 (24.8 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 16 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
++ TS ++ + +D +L+PG V +N + ++ L + D V A+
Sbjct: 123 VIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAM 175
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 305 (112.4 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 64/137 (46%), Positives = 92/137 (67%)
Query: 172 NQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 231
++L G D VQ R + E+ + L VKVI ATNR +TLDPAL+R GR+DRKIE P
Sbjct: 298 SELSG-DREVQ-RTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELP 355
Query: 232 LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKV 291
P+E+++ RI IH+ +M + +DVN +EL + DD +GA +KA+C EAG++ALR ++
Sbjct: 356 HPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEI 415
Query: 292 TNEDFKKSKESVLYRKK 308
+EDF + SVL +KK
Sbjct: 416 DHEDFVEGITSVLSKKK 432
Score = 293 (108.2 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 52/84 (61%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A+QT+ATFL++ G +L+Q ++GDG K+VR+ F +A+E AP+I+FIDE+DA+GTKR+DS
Sbjct: 239 ACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDS 298
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
G+RE+QRTMLELLNQLDGF +
Sbjct: 299 ELSGDREVQRTMLELLNQLDGFST 322
Score = 89 (36.4 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 15/32 (46%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A+QT+ATFL++ G +L+Q ++GDG K+
Sbjct: 236 LARACASQTNATFLKLAGPQLVQMFIGDGAKM 267
Score = 56 (24.8 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 12/53 (22%), Positives = 26/53 (49%)
Query: 16 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
++ TS ++ + +D +L+PG V +N + ++ L + D V A+
Sbjct: 123 VIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAM 175
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 298 (110.0 bits), Expect = 4.2e-32, Sum P(2) = 4.2e-32
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 246 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 305
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 306 EKAGDREVQRTMLELLNQLDGFQPNTQ 332
Score = 295 (108.9 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 310 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 368
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 369 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 428
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 429 EGILEVQAKKK 439
Score = 87 (35.7 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 243 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 274
Score = 71 (30.1 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 129 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 182
Score = 38 (18.4 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 126 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 185
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 186 ERPTEQYSDIGGLDKQIQ 203
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 295 (108.9 bits), Expect = 5.7e-32, Sum P(2) = 5.7e-32
Identities = 55/87 (63%), Positives = 69/87 (79%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA GTKR+DS
Sbjct: 234 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDS 293
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 294 EKAGDREVQRTMLELLNQLDGFQPNTQ 320
Score = 291 (107.5 bits), Expect = 2.1e-39, Sum P(3) = 2.1e-39
Identities = 59/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+D+KIEFP+P+E+
Sbjct: 298 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEA 356
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 357 RARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTHEDYM 416
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 417 EGILEVQAKKK 427
Score = 87 (35.7 bits), Expect = 2.1e-39, Sum P(3) = 2.1e-39
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 231 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 262
Score = 71 (30.1 bits), Expect = 2.1e-39, Sum P(3) = 2.1e-39
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 117 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 170
Score = 38 (18.4 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 114 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 173
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 174 ERPTEQYSDIGGLDKQIQ 191
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 298 (110.0 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 256 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 315
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 316 EKAGDREVQRTMLELLNQLDGFQPNTQ 342
Score = 295 (108.9 bits), Expect = 2.4e-39, Sum P(3) = 2.4e-39
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 320 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 378
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 379 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 438
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 439 EGILEVQAKKK 449
Score = 87 (35.7 bits), Expect = 2.4e-39, Sum P(3) = 2.4e-39
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 253 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 284
Score = 71 (30.1 bits), Expect = 2.4e-39, Sum P(3) = 2.4e-39
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 123 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 176
Score = 38 (18.4 bits), Expect = 4.3e-28, Sum P(2) = 4.3e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 120 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 179
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 180 ERPTEQYSDIGGLDKQIQ 197
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 299 (110.3 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 55/87 (63%), Positives = 71/87 (81%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 227 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 286
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF +Q
Sbjct: 287 EKAGDREVQRTMLELLNQLDGFQPNMQ 313
Score = 289 (106.8 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 59/131 (45%), Positives = 84/131 (64%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 291 DREVQ-RTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 349
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M + DVN +EL DD +GA KA+C EAG++ALR ++ +ED+
Sbjct: 350 RARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYM 409
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 410 EGILEVQAKKK 420
Score = 87 (35.7 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 224 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 255
Score = 71 (30.1 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 110 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 163
Score = 38 (18.4 bits), Expect = 7.3e-28, Sum P(2) = 7.3e-28
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 107 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 166
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 167 ERPTEQYSDIGGLDKQIQ 184
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 53/83 (63%), Positives = 74/83 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T TF+ VVGSE +QKYLG+GP++VR++FR+A E++PSI+FIDE+DA+ TKR+D+
Sbjct: 191 AVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDA 250
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR +LELLNQ+DGFD
Sbjct: 251 QTGADREVQRILLELLNQMDGFD 273
Score = 297 (109.6 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 62/123 (50%), Positives = 83/123 (67%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD
Sbjct: 253 GADREVQ-RILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 311
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
K KR IF S+M ++ DVN++ ++ D +S ADI AI EAG+ A+R+ R +T D
Sbjct: 312 KQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITAND 371
Query: 296 FKK 298
F++
Sbjct: 372 FEQ 374
Score = 138 (53.6 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 38/154 (24%), Positives = 77/154 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G +IID+N+ IVS++ GS +YV ILS ++K+ L+P SV L+ H++V +L ++D
Sbjct: 62 IGQFLDIIDNNYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESD 121
Query: 63 PMVTA--VANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
+ + + + + + G ++ ++ + + +L + T +G E L
Sbjct: 122 SSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPL---TCPELYEKIGIEPPMGILIY 178
Query: 121 GPKLVRELFRV-AEEHAPSIVFIDEIDAVGTKRY 153
GP + V A + + FI + + ++Y
Sbjct: 179 GPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKY 212
Score = 113 (44.8 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+V AVAN+T TF+ VVGSE +QKYLG+GP++
Sbjct: 188 LVKAVANETQVTFIGVVGSEFVQKYLGEGPRM 219
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 53/83 (63%), Positives = 74/83 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T TF+ VVGSE +QKYLG+GP++VR++FR+A E++PSI+FIDE+DA+ TKR+D+
Sbjct: 191 AVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDA 250
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR +LELLNQ+DGFD
Sbjct: 251 QTGADREVQRILLELLNQMDGFD 273
Score = 297 (109.6 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 62/123 (50%), Positives = 83/123 (67%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD
Sbjct: 253 GADREVQ-RILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 311
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
K KR IF S+M ++ DVN++ ++ D +S ADI AI EAG+ A+R+ R +T D
Sbjct: 312 KQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITAND 371
Query: 296 FKK 298
F++
Sbjct: 372 FEQ 374
Score = 138 (53.6 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 38/154 (24%), Positives = 77/154 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G +IID+N+ IVS++ GS +YV ILS ++K+ L+P SV L+ H++V +L ++D
Sbjct: 62 IGQFLDIIDNNYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESD 121
Query: 63 PMVTA--VANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
+ + + + + + G ++ ++ + + +L + T +G E L
Sbjct: 122 SSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPL---TCPELYEKIGIEPPMGILIY 178
Query: 121 GPKLVRELFRV-AEEHAPSIVFIDEIDAVGTKRY 153
GP + V A + + FI + + ++Y
Sbjct: 179 GPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKY 212
Score = 113 (44.8 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 20/32 (62%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+V AVAN+T TF+ VVGSE +QKYLG+GP++
Sbjct: 188 LVKAVANETQVTFIGVVGSEFVQKYLGEGPRM 219
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 291 (107.5 bits), Expect = 7.1e-39, Sum P(3) = 7.1e-39
Identities = 61/131 (46%), Positives = 85/131 (64%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L D+KVI ATNR++ L PAL+R GR+DRKIEFP P+E+
Sbjct: 296 DREVQ-RTMLELLNQLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEFPHPNEEA 353
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL + DD +GA KA+C EAG++ALR VT+EDF
Sbjct: 354 RARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFM 413
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 414 DAIMEVQAKKK 424
Score = 287 (106.1 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 52/84 (61%), Positives = 70/84 (83%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT +TFL++ G +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DA+GTKR+DS
Sbjct: 232 ACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS 291
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
G+RE+QRTMLELLNQL+GF S
Sbjct: 292 EKAGDREVQRTMLELLNQLNGFSS 315
Score = 84 (34.6 bits), Expect = 7.1e-39, Sum P(3) = 7.1e-39
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT +TFL++ G +L+Q ++GDG KL
Sbjct: 229 LARACAAQTKSTFLKLAGPQLVQMFIGDGAKL 260
Score = 68 (29.0 bits), Expect = 7.1e-39, Sum P(3) = 7.1e-39
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 2 SVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDT 61
SV L+ A++ TS +++ ++ VD ++L+PG +N + ++ L +
Sbjct: 102 SVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLAGVNKDFYLILETLPAEY 161
Query: 62 DPMVTAV 68
D V A+
Sbjct: 162 DARVKAM 168
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 296 (109.3 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 55/84 (65%), Positives = 71/84 (84%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E AP I+FIDEIDA+GTKR+DS
Sbjct: 224 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS 283
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
G+RE+QRTMLELLNQLDGF S
Sbjct: 284 EVSGDREVQRTMLELLNQLDGFSS 307
Score = 287 (106.1 bits), Expect = 7.6e-39, Sum P(3) = 7.6e-39
Identities = 61/137 (44%), Positives = 87/137 (63%)
Query: 172 NQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 231
+++ G D VQ R + E+ + L +KVI ATNR + LDPAL+R GR+DRKIEFP
Sbjct: 283 SEVSG-DREVQ-RTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFP 340
Query: 232 LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKV 291
P E+ + RI IH+ +M + DVN +EL + DD +GA +KA+C EAG++ALR +V
Sbjct: 341 HPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV 400
Query: 292 TNEDFKKSKESVLYRKK 308
+EDF + V +KK
Sbjct: 401 NHEDFNEGIIQVQAKKK 417
Score = 91 (37.1 bits), Expect = 7.6e-39, Sum P(3) = 7.6e-39
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
M A A QT+ATFL++ G +L+Q ++GDG KL
Sbjct: 221 MARACAAQTNATFLKLAGPQLVQMFIGDGAKL 252
Score = 64 (27.6 bits), Expect = 7.6e-39, Sum P(3) = 7.6e-39
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 16 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
++ TS ++ ++ VD D L+PG V +N + ++ L + D V A+
Sbjct: 108 VLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAM 160
Score = 38 (18.4 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 144 EIDAVGTKRYDSNSGGEREIQ 164
E+D T+ Y+ G E++IQ
Sbjct: 161 EVDEKPTEDYNDIGGLEKQIQ 181
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 290 (107.1 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 54/84 (64%), Positives = 70/84 (83%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT+ATFL++ G +L+Q ++GDG KLVR+ F +A+E +P I+FIDEIDA+GTKR+DS
Sbjct: 223 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS 282
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
G+RE+QRTMLELLNQLDGF S
Sbjct: 283 EVSGDREVQRTMLELLNQLDGFSS 306
Score = 287 (106.1 bits), Expect = 9.1e-39, Sum P(3) = 9.1e-39
Identities = 61/137 (44%), Positives = 87/137 (63%)
Query: 172 NQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 231
+++ G D VQ R + E+ + L +KVI ATNR + LDPAL+R GR+DRKIEFP
Sbjct: 282 SEVSG-DREVQ-RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFP 339
Query: 232 LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKV 291
P E+ + RI IH+ +M + DVN +EL + DD +GA +KA+C EAG++ALR +V
Sbjct: 340 HPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEV 399
Query: 292 TNEDFKKSKESVLYRKK 308
+EDF + V +KK
Sbjct: 400 NHEDFNEGIIQVQAKKK 416
Score = 91 (37.1 bits), Expect = 9.1e-39, Sum P(3) = 9.1e-39
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
M A A QT+ATFL++ G +L+Q ++GDG KL
Sbjct: 220 MARACAAQTNATFLKLAGPQLVQMFIGDGAKL 251
Score = 63 (27.2 bits), Expect = 9.1e-39, Sum P(3) = 9.1e-39
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 16 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
++ TS ++ ++ VD D L+PG V +N + ++ L + D V A+
Sbjct: 107 VLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAM 159
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 315 (115.9 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 67/143 (46%), Positives = 97/143 (67%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + + +VKVIMATNR +TLDPAL+RP
Sbjct: 251 EIDAIATKRFDAQTGADREVQ-RILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRP 309
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
GR+DRKIEFPLPD + KR IF + TS+M L+++V+L++ + D LSGA+I++IC EAG+
Sbjct: 310 GRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGM 369
Query: 282 MALRERRMKVTNEDFKKS-KESV 303
A+R+ R + +DF+K K S+
Sbjct: 370 HAIRKNRYVILPKDFEKGYKASI 392
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 55/86 (63%), Positives = 76/86 (88%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ TSA F+RVVGSE +QKYLG+GP+LVR++FR+A E++P+I+FIDEIDA+ TKR+D+
Sbjct: 203 AVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDA 262
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR ++ELLNQ+DGFD V
Sbjct: 263 QTGADREVQRILMELLNQMDGFDVSV 288
Score = 115 (45.5 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 37/154 (24%), Positives = 74/154 (48%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G L E++D N IV ++ GS V ILS +D++ L+P SV L +A+V L ++D
Sbjct: 74 IGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESD 133
Query: 63 PMVTAVA--NQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
+ + + S ++ + G ++ ++ + + +L + T + +G + + L
Sbjct: 134 SSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPL---THHNLYKQIGIDPPRGVLLY 190
Query: 121 GPKLV-RELFRVAEEHAPSIVFIDEIDAVGTKRY 153
GP + + A H S FI + + ++Y
Sbjct: 191 GPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKY 224
Score = 114 (45.2 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ TSA F+RVVGSE +QKYLG+GP+L
Sbjct: 200 LAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRL 231
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 298 (110.0 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 185 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 244
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 245 EKAGDREVQRTMLELLNQLDGFQPNTQ 271
Score = 295 (108.9 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 249 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 307
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 308 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 367
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 368 EGILEVQAKKK 378
Score = 87 (35.7 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 182 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 213
Score = 57 (25.1 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 9 IIDDNHAIVSTSVGSEHY-VSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTA 67
+I D A T SE Y + ++ VD ++L+PG V +N + ++ L + D V A
Sbjct: 62 VIGDM-ARCQTVYDSETYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKA 120
Query: 68 V 68
+
Sbjct: 121 M 121
Score = 49 (22.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 22/89 (24%), Positives = 40/89 (44%)
Query: 80 VGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYL-GDGPKLVRELFRVAEE---H 135
+GS L+ +GD + + FL V+G +K GD + ++ + + E
Sbjct: 57 IGSPLV---IGDMARCQTVYDSETYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTE 113
Query: 136 APSIVFIDEIDAVGTKRYDSNSGGEREIQ 164
S V E+D T++Y G +++IQ
Sbjct: 114 YDSRVKAMEVDERPTEQYSDIGGLDKQIQ 142
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 298 (110.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 55/87 (63%), Positives = 70/87 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 189 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 248
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF Q
Sbjct: 249 EKAGDREVQRTMLELLNQLDGFQPNTQ 275
Score = 295 (108.9 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 60/131 (45%), Positives = 86/131 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 253 DREVQ-RTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 311
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ RI IH+ +M ++ DVN +EL DD +GA KA+C EAG++ALR ++T+ED+
Sbjct: 312 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 371
Query: 298 KSKESVLYRKK 308
+ V +KK
Sbjct: 372 EGILEVQAKKK 382
Score = 87 (35.7 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 186 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 217
Score = 55 (24.4 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 11/44 (25%), Positives = 25/44 (56%)
Query: 25 HYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
+++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 82 YFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 125
Score = 38 (18.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 26/92 (28%), Positives = 44/92 (47%)
Query: 80 VGSELI---QKYLGDGPKLAVANQTSATFLRVVGSELIQKYL-GDGPKLVRELFRVAEE- 134
+GS LI +K +G +L +QT FL V+G +K GD + ++ + + E
Sbjct: 58 IGSPLIYTSRKKEENGLELT-NSQTY--FLPVIGLVDAEKLKPGDLVGVNKDSYLILETL 114
Query: 135 --HAPSIVFIDEIDAVGTKRYDSNSGGEREIQ 164
S V E+D T++Y G +++IQ
Sbjct: 115 PTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQ 146
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 303 (111.7 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 52/83 (62%), Positives = 75/83 (90%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN T+A+F+RV GSE +QKYLG+GP++VR++FR+A E++P+I+FIDEIDA+ TKR+D+
Sbjct: 219 AVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDA 278
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR +LELLNQ+DGF+
Sbjct: 279 QTGADREVQRILLELLNQMDGFE 301
Score = 265 (98.3 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 62/137 (45%), Positives = 85/137 (62%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 267 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRP 325
Query: 222 GRIDRKIEFP-LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAG 280
GR+DRKIEFP L D + +R IF+ S+M+L+ +V+L LI+ + LSGA I AI EAG
Sbjct: 326 GRLDRKIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAG 385
Query: 281 LMALRERRMKVTNEDFK 297
L A+R+ R + D +
Sbjct: 386 LRAVRKNRYNIIQSDLE 402
Score = 122 (48.0 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
Identities = 28/99 (28%), Positives = 54/99 (54%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E ID N IV +S GS + V ILS +D+++L+P SV L+ +A+V +L + D
Sbjct: 90 IGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEAD 149
Query: 63 PMVTAVAN--QTSATFLRVVGSELIQKYLGDGPKLAVAN 99
+ + + T+ V G ++ ++ + + +L + +
Sbjct: 150 SSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTH 188
Score = 112 (44.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+V AVAN T+A+F+RV GSE +QKYLG+GP++
Sbjct: 216 LVKAVANSTTASFIRVNGSEFVQKYLGEGPRM 247
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 297 (109.6 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 56/89 (62%), Positives = 74/89 (83%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A +T+ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DAVGTKR+DS
Sbjct: 264 ACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDS 323
Query: 156 NSGGEREIQRTMLELLNQLDGF--DSRVQ 182
G+RE+QRTMLELLNQLDGF D R++
Sbjct: 324 EKSGDREVQRTMLELLNQLDGFASDDRIK 352
Score = 291 (107.5 bits), Expect = 5.0e-38, Sum P(3) = 5.0e-38
Identities = 59/140 (42%), Positives = 91/140 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L +KV+ ATNR++ LDPAL+R GR+DRKIEFPLP+E+
Sbjct: 328 DREVQ-RTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEA 386
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH+ +MT+ + VN EL + D+ GA +KA+C EAG++ALR+ K+ +E++
Sbjct: 387 RANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHSKIGHENYV 446
Query: 298 KSKESVLYRKKEGTPEGLYL 317
+ V +KK+ T G+Y+
Sbjct: 447 DAIAEVQAKKKD-TNMGIYV 465
Score = 85 (35.0 bits), Expect = 5.0e-38, Sum P(3) = 5.0e-38
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A +T+ATFL++ G +L+Q ++GDG KL
Sbjct: 261 LARACAAETNATFLKLAGPQLVQMFIGDGAKL 292
Score = 67 (28.6 bits), Expect = 5.0e-38, Sum P(3) = 5.0e-38
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS Y+ ++ VD ++L+PG + +N + ++ L + D V A+
Sbjct: 147 AVIKTSTRQTIYLPLIGLVDHEKLKPGDLIGVNKDSYLILDTLPAEYDNRVKAM 200
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 306 (112.8 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 52/83 (62%), Positives = 75/83 (90%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN T+A+F+R+ GSE +QKYLG+GP++VR++FR+A E++P+I+FIDEIDA+ TKR+D+
Sbjct: 208 AVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDA 267
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR +LELLNQ+DGFD
Sbjct: 268 QTGADREVQRILLELLNQMDGFD 290
Score = 269 (99.8 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 67/151 (44%), Positives = 90/151 (59%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + VKVIMATNR +TLDPAL+RP
Sbjct: 256 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRP 314
Query: 222 GRIDRKIEFP-LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAG 280
GR+DRKIEFP L D + +R IF+ S+M+LA + +L LI+ D LSGA I AI EAG
Sbjct: 315 GRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAG 374
Query: 281 LMALRERRMKVTNEDFKKSKESVLYRKKEGT 311
L A+R+ R + D +++ S + K GT
Sbjct: 375 LRAVRKNRYMILQSDLEEAYTSQV---KTGT 402
Score = 114 (45.2 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E ID+N IVS++ GS + V ILS +D++ L+ SV L+ +A+V +L + D
Sbjct: 79 IGQFLEPIDENTGIVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEAD 138
Query: 63 PMVTAVAN--QTSATFLRVVGSELIQKYLGDGPKL 95
++ V + T+ V G ++ ++ + + +L
Sbjct: 139 SSISIVGEDQKPDVTYADVGGLDMQKQEIKEAVEL 173
Score = 111 (44.1 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
Identities = 19/32 (59%), Positives = 28/32 (87%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+V AVAN T+A+F+R+ GSE +QKYLG+GP++
Sbjct: 205 LVKAVANSTTASFIRINGSEFVQKYLGEGPRM 236
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 306 (112.8 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 52/83 (62%), Positives = 75/83 (90%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN T+A+F+R+ GSE +QKYLG+GP++VR++FR+A E++P+I+FIDEIDA+ TKR+D+
Sbjct: 208 AVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDA 267
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR +LELLNQ+DGFD
Sbjct: 268 QTGADREVQRILLELLNQMDGFD 290
Score = 269 (99.8 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 67/151 (44%), Positives = 90/151 (59%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + VKVIMATNR +TLDPAL+RP
Sbjct: 256 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRP 314
Query: 222 GRIDRKIEFP-LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAG 280
GR+DRKIEFP L D + +R IF+ S+M+LA + +L LI+ D LSGA I AI EAG
Sbjct: 315 GRLDRKIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAG 374
Query: 281 LMALRERRMKVTNEDFKKSKESVLYRKKEGT 311
L A+R+ R + D +++ S + K GT
Sbjct: 375 LRAVRKNRYMILQSDLEEAYTSQV---KTGT 402
Score = 114 (45.2 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E ID+N IVS++ GS + V ILS +D++ L+ SV L+ +A+V +L + D
Sbjct: 79 IGQFLEPIDENTGIVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEAD 138
Query: 63 PMVTAVAN--QTSATFLRVVGSELIQKYLGDGPKL 95
++ V + T+ V G ++ ++ + + +L
Sbjct: 139 SSISIVGEDQKPDVTYADVGGLDMQKQEIKEAVEL 173
Score = 111 (44.1 bits), Expect = 3.5e-33, Sum P(2) = 3.5e-33
Identities = 19/32 (59%), Positives = 28/32 (87%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+V AVAN T+A+F+R+ GSE +QKYLG+GP++
Sbjct: 205 LVKAVANSTTASFIRINGSEFVQKYLGEGPRM 236
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 293 (108.2 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 59/138 (42%), Positives = 91/138 (65%)
Query: 172 NQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 231
+++ G D VQ R + E+ + L ++KVI ATNRI+ LDPAL+R GR+DRKIEFP
Sbjct: 280 SEVSG-DREVQ-RTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFP 337
Query: 232 LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKV 291
LP+E+ + I IH+ +M ++ DVN EL + +D +GA +KA+C EAG++ALR ++
Sbjct: 338 LPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTEL 397
Query: 292 TNEDFKKSKESVLYRKKE 309
+ DF + V+ +KK+
Sbjct: 398 IHNDFVEGCVEVMAKKKK 415
Score = 284 (105.0 bits), Expect = 4.3e-29, Sum P(2) = 4.3e-29
Identities = 51/84 (60%), Positives = 70/84 (83%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT++T+L++ G +L+Q ++GDG KLVR+ F +A+E P+I+FIDE+DA+GTKR+DS
Sbjct: 221 ACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDS 280
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
G+RE+QRTMLELLNQLDGF S
Sbjct: 281 EVSGDREVQRTMLELLNQLDGFSS 304
Score = 82 (33.9 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 14/32 (43%), Positives = 24/32 (75%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT++T+L++ G +L+Q ++GDG KL
Sbjct: 218 LARACAAQTNSTYLKLAGPQLVQMFIGDGAKL 249
Score = 55 (24.4 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 16 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
+V S +++ VD D+L PG V +N + ++ L + D V A+
Sbjct: 105 VVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAM 157
Score = 37 (18.1 bits), Expect = 6.0e-33, Sum P(3) = 6.0e-33
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 144 EIDAVGTKRYDSNSGGEREIQ 164
EID T+ Y G +++IQ
Sbjct: 158 EIDEKPTEEYSDIGGLDKQIQ 178
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 239 (89.2 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 54/128 (42%), Positives = 77/128 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V +R L+++ + + I DV ++ ATNR + +D AL+RPGRIDR I PLPD T+R
Sbjct: 745 VADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRRE 804
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRE--RRMKVTNEDFKK 298
I N+ M ++ DVNL ELI D SGA+I A+C EA L+AL E + +T F +
Sbjct: 805 ILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQANSITRRHFTR 864
Query: 299 SKESVLYR 306
+ +V R
Sbjct: 865 ALSTVTPR 872
Score = 176 (67.0 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 34/83 (40%), Positives = 54/83 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN++ FL + G EL+ KY+G+ + VRE+FR A +PSI+F DE+DA+ +R S
Sbjct: 680 ALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIER-GS 738
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+SG R + +LL ++DG +
Sbjct: 739 SSGAGNVADRVLAQLLTEMDGIE 761
Score = 156 (60.0 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 40/95 (42%), Positives = 52/95 (54%)
Query: 200 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMT-LAEDVNLQ 258
G V V+ ATNR LD AL RPGR D++IE +P+ + I R+ L +V L
Sbjct: 491 GQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDILQKLLQRVPHLLTEVELL 550
Query: 259 ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 293
+L + GAD+KA+C EAGL ALR K N
Sbjct: 551 QLANSAHGYVGADLKALCNEAGLYALRRVLNKQPN 585
Score = 132 (51.5 bits), Expect = 4.5e-30, Sum P(2) = 4.5e-30
Identities = 32/85 (37%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+ A + G E+I K+ G+ +R++F A PSI+FIDE+DA+ KR
Sbjct: 406 AVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--- 462
Query: 156 NSGGEREIQ-RTMLELLNQLDGFDS 179
G + E++ R + LL +DG S
Sbjct: 463 -EGAQNEVEKRVVASLLTLMDGIGS 486
Score = 64 (27.6 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPK 94
A+AN++ FL + G EL+ KY+G+ +
Sbjct: 680 ALANESGLNFLAIKGPELMNKYVGESER 707
Score = 47 (21.6 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+ A + G E+I K+ G+
Sbjct: 406 AVANEVGAYVSVINGPEIISKFYGE 430
Score = 38 (18.4 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 273 KAICTEAGLMALRERRMKVTNEDFKKSKESV--LYRK 307
KA+ E+GL L + ++ N+ +S+ +V ++RK
Sbjct: 679 KALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 715
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 294 (108.6 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 50/83 (60%), Positives = 71/83 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN T A F+RV GSE + KYLG+GP++VR++FR+A E+APSI+FIDE+D++ TKR+D+
Sbjct: 225 AVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDA 284
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR ++ELL Q+DGFD
Sbjct: 285 QTGSDREVQRILIELLTQMDGFD 307
Score = 264 (98.0 bits), Expect = 5.0e-33, Sum P(2) = 5.0e-33
Identities = 61/125 (48%), Positives = 81/125 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFP-LPD 234
G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RPGR+DRKIEFP L D
Sbjct: 287 GSDREVQ-RILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRD 345
Query: 235 EKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 294
+ +R IF S+M+LA + +L LI+ D LSGA I AI EAGL A+R+ R +
Sbjct: 346 RRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQS 405
Query: 295 DFKKS 299
D +++
Sbjct: 406 DLEEA 410
Score = 118 (46.6 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E ID N IVS++ G + V ILS +D++ L+P SV L+ +A+V +L D+D
Sbjct: 96 IGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSD 155
Query: 63 PMVTAVAN--QTSATFLRVVGSELIQKYLGDGPKL 95
++ + + T+ V G ++ ++ + + +L
Sbjct: 156 SSISVMGENEKPDVTYADVGGLDMQKQEIREAVEL 190
Score = 105 (42.0 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 19/32 (59%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+V AVAN T A F+RV GSE + KYLG+GP++
Sbjct: 222 LVKAVANSTKAAFIRVNGSEFVHKYLGEGPRM 253
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 306 (112.8 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 63/140 (45%), Positives = 92/140 (65%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRK+EF LPD
Sbjct: 283 GGDNEVQ-RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL 341
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+++ +IF IHT M D+ + L + +GADI+++CTEAG+ A+R RR VT +D
Sbjct: 342 ESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKD 401
Query: 296 FKKSKESVL--YRKKEGTPE 313
F + V+ Y+K TP+
Sbjct: 402 FLDAVNKVIKGYQKFSATPK 421
Score = 285 (105.4 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 51/85 (60%), Positives = 69/85 (81%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A IVF DE+DA+G R+D
Sbjct: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
GG+ E+QRTMLE++NQLDGFD+R
Sbjct: 281 GVGGDNEVQRTMLEIVNQLDGFDAR 305
Score = 105 (42.0 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 18/32 (56%), Positives = 27/32 (84%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARM 249
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 268 (99.4 bits), Expect = 3.0e-36, Sum P(3) = 3.0e-36
Identities = 57/131 (43%), Positives = 80/131 (61%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + G VK+IMATNR +TLDPAL+RPGR+DRK+E PLP+E
Sbjct: 259 DREIQ-RTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH + +++ + ++ D +GAD++ ICTEAGL ALR R V EDF
Sbjct: 318 RMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFM 377
Query: 298 KSKESVLYRKK 308
K+ + KK
Sbjct: 378 KAVRKIADNKK 388
Score = 259 (96.2 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 55/140 (39%), Positives = 87/140 (62%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A+Q A FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 195 AIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSE 254
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ Q + + TL + PG D K+ I N
Sbjct: 255 GTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPN 314
Query: 210 RIETLDPALIRPGRIDRKIE 229
+ +D I ++++ E
Sbjct: 315 EVARMDILKIHAEPLNKRGE 334
Score = 76 (31.8 bits), Expect = 3.0e-36, Sum P(3) = 3.0e-36
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A+A+Q A FL+VV S ++ KY+G+ +L
Sbjct: 192 LARAIASQMDANFLKVVSSAIVDKYIGESARL 223
Score = 73 (30.8 bits), Expect = 3.0e-36, Sum P(3) = 3.0e-36
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 6 LEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMV 65
L+++ DN IV S G + V ++K++L+PG V L+ ++ L + DP+V
Sbjct: 70 LKQLTPDNF-IVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLV 128
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 284 (105.0 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 53/89 (59%), Positives = 73/89 (82%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A Q++ATFL++ +L+Q ++GDG KLVR+ F +A+E +P+I+FIDE+DA+GTKR+DS
Sbjct: 238 ACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDS 297
Query: 156 NSGGEREIQRTMLELLNQLDGF--DSRVQ 182
G+RE+QRTMLELLNQLDGF D RV+
Sbjct: 298 EKAGDREVQRTMLELLNQLDGFSSDDRVK 326
Score = 280 (103.6 bits), Expect = 7.1e-36, Sum P(3) = 7.1e-36
Identities = 57/132 (43%), Positives = 86/132 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++TLDPAL+R GR+DRK+EFPLP+E+
Sbjct: 302 DREVQ-RTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEA 360
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH+ +M + +D+N +EL + D+ +GA +K++C EAG++ALR+ K+ +E F
Sbjct: 361 RVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINHEHFM 420
Query: 298 KSKESVLYRKKE 309
V RK +
Sbjct: 421 DGILEVQMRKSK 432
Score = 78 (32.5 bits), Expect = 7.1e-36, Sum P(3) = 7.1e-36
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A Q++ATFL++ +L+Q ++GDG KL
Sbjct: 235 LARACAAQSNATFLKLAAPQLVQMFIGDGAKL 266
Score = 62 (26.9 bits), Expect = 7.1e-36, Sum P(3) = 7.1e-36
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS ++ ++ V+ ++L PG + +N + ++ L + D V A+
Sbjct: 121 AVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAM 174
Score = 37 (18.1 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 92 GPKLAVANQTSAT-FLRVVGS-ELIQKYLGDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL ++G E + + GD + ++ + + ++ S V E+D
Sbjct: 118 GKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVD 177
Query: 147 AVGTKRYDSNSGGEREIQ 164
T+RY G ++I+
Sbjct: 178 EKPTERYSDIGGLSKQIE 195
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 275 (101.9 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 56/126 (44%), Positives = 83/126 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + L G VKVIMATNR +TLDPAL+RPGR+DRKIE LP+E++
Sbjct: 267 DREIQ-RTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH++++T +++ + ++ D S AD++ +CTEAG+ A+R R V +EDF
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 298 KSKESV 303
K+ V
Sbjct: 386 KAVRKV 391
Score = 258 (95.9 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +++RE+F A +H P IVF+DEIDA+G +R+
Sbjct: 203 AVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSE 262
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+ +REIQRT++ELLNQLDGFDS
Sbjct: 263 GTSADREIQRTLMELLNQLDGFDS 286
Score = 71 (30.1 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ ++
Sbjct: 200 LARAVASQLDCNFLKVVSSAIVDKYIGESARM 231
Score = 62 (26.9 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V ++K++L+ G V L+ ++ L + D
Sbjct: 74 VGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVD 133
Query: 63 PMVTAVANQ 71
P+V ++++
Sbjct: 134 PLVYKMSHE 142
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 275 (101.9 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 56/126 (44%), Positives = 83/126 (65%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + L G VKVIMATNR +TLDPAL+RPGR+DRKIE LP+E++
Sbjct: 267 DREIQ-RTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH++++T +++ + ++ D S AD++ +CTEAG+ A+R R V +EDF
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 298 KSKESV 303
K+ V
Sbjct: 386 KAVRKV 391
Score = 258 (95.9 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 45/84 (53%), Positives = 64/84 (76%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +++RE+F A +H P IVF+DEIDA+G +R+
Sbjct: 203 AVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSE 262
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+ +REIQRT++ELLNQLDGFDS
Sbjct: 263 GTSADREIQRTLMELLNQLDGFDS 286
Score = 71 (30.1 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ ++
Sbjct: 200 LARAVASQLDCNFLKVVSSAIVDKYIGESARM 231
Score = 62 (26.9 bits), Expect = 2.5e-35, Sum P(3) = 2.5e-35
Identities = 15/69 (21%), Positives = 35/69 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V ++K++L+ G V L+ ++ L + D
Sbjct: 74 VGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVD 133
Query: 63 PMVTAVANQ 71
P+V ++++
Sbjct: 134 PLVYKMSHE 142
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 289 (106.8 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 61/138 (44%), Positives = 90/138 (65%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRK+EF LPD
Sbjct: 285 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDL 343
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M+ A D+ + L + +GADI+++CTEAG+ A+R RR V+ +D
Sbjct: 344 EGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKD 403
Query: 296 FKKSKESVL--YRKKEGT 311
F ++ + V+ Y K T
Sbjct: 404 FLEAIDKVIKSYAKFSAT 421
Score = 285 (105.4 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 50/85 (58%), Positives = 69/85 (81%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VR+LF++A I+F DE+DA+G R+D
Sbjct: 223 AVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDD 282
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 283 GAGGDNEVQRTMLELINQLDGFDPR 307
Score = 104 (41.7 bits), Expect = 9.4e-35, Sum P(2) = 9.4e-35
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 223 AVANRTDAAFVRVIGSELVQKYVGEGARM 251
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 285 (105.4 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 65/157 (41%), Positives = 97/157 (61%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + VK IMATNR +TLDP L+RP
Sbjct: 215 EIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQNISVKAIMATNRKDTLDPTLLRP 273
Query: 222 GRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGL 281
G +D KIEFPLPD + KR IF+ TS+M L+E+VN+++ + D +SGADI +IC E+G+
Sbjct: 274 GHLDHKIEFPLPDHR-KRLIFSTITSKMNLSEEVNVEDYVACPDKISGADINSICQESGM 332
Query: 282 MALRERRMKVTNEDFKKSKESVLYRKKEGT-PEGLYL 317
+ + E +DFKK+ ++V+ + + T P+ L+L
Sbjct: 333 LTVCENCHIFLAKDFKKAYKTVIKKVNKWTCPKSLFL 369
Score = 272 (100.8 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 46/85 (54%), Positives = 69/85 (81%)
Query: 97 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSN 156
VA+ A F+ VVGSE + KYLG+GP+++ ++F + +E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 168 VAHHMIAAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAIIFIDEIDAIATKRFDAQ 227
Query: 157 SGGEREIQRTMLELLNQLDGFDSRV 181
+G +RE+QR +LELLNQ+DGFD +
Sbjct: 228 TGADREVQRILLELLNQMDGFDQNI 252
Score = 107 (42.7 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E +D N IV + GS Y ILS +D++ L+P SV L+ + +V VL + +
Sbjct: 38 IGQFLEAVDQNTVIVGSITGSNCYFCILSTIDQELLKPNASVALHKHSNTLVNVLPPEAE 97
Query: 63 PMVTAVANQTSATFLRV-VGSELIQK 87
+ + + + +GS IQK
Sbjct: 98 SSIMMLTSDQKPNVIYADIGSMDIQK 123
Score = 86 (35.3 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ VA+ A F+ VVGSE + KYLG+GP++
Sbjct: 164 LAKTVAHHMIAAFIHVVGSEFVHKYLGEGPRI 195
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 287 (106.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 153 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 211
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 212 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 271
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 272 FLEAVNKVIKSYAKFSATP 290
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 91 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 150
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 151 GAGGDNEVQRTMLELINQLDGFDPR 175
Score = 104 (41.7 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 91 AVANRTDACFIRVIGSELVQKYVGEGARM 119
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 287 (106.1 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 281 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 339
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 340 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 399
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 400 FLEAVNKVIKSYAKFSATP 418
Score = 285 (105.4 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 219 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 278
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 279 GAGGDNEVQRTMLELINQLDGFDPR 303
Score = 104 (41.7 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 219 AVANRTDACFIRVIGSELVQKYVGEGARM 247
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 288 (106.4 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 60/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRK+EF LPD+
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQ 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ IF IH M++ D+ L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 DGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ + V+ Y K TP
Sbjct: 409 FLEAVKKVIKSYAKFSATP 427
Score = 286 (105.7 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 104 (41.7 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
Score = 47 (21.6 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 20/80 (25%), Positives = 34/80 (42%)
Query: 11 DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTA--V 68
DD I++ ++ V + V +E G V ++ + + L DP VT V
Sbjct: 107 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQV 166
Query: 69 ANQTSATFLRVVG-SELIQK 87
++ T+ V G E I+K
Sbjct: 167 EDKPDVTYSDVGGCKEQIEK 186
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 288 (106.4 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 285 (105.4 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 104 (41.7 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 287 (106.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 289 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 347
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 348 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 407
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 408 FLEAVNKVIKSYAKFSATP 426
Score = 285 (105.4 bits), Expect = 6.3e-25, P = 6.3e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 227 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 286
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 287 GAGGDNEVQRTMLELINQLDGFDPR 311
Score = 104 (41.7 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 227 AVANRTDACFIRVIGSELVQKYVGEGARM 255
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 287 (106.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 285 (105.4 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 104 (41.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 287 (106.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 285 (105.4 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 104 (41.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 287 (106.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 285 (105.4 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 104 (41.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 287 (106.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 285 (105.4 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 104 (41.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 287 (106.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 285 (105.4 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 104 (41.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 287 (106.1 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 285 (105.4 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 104 (41.7 bits), Expect = 2.2e-34, Sum P(2) = 2.2e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 287 (106.1 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 291 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 349
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 350 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 409
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 410 FLEAVNKVIKSYAKFSATP 428
Score = 285 (105.4 bits), Expect = 6.5e-25, P = 6.5e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 229 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 288
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 289 GAGGDNEVQRTMLELINQLDGFDPR 313
Score = 104 (41.7 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 229 AVANRTDACFIRVIGSELVQKYVGEGARM 257
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 287 (106.1 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 332 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 390
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 391 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 450
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 451 FLEAVNKVIKSYAKFSATP 469
Score = 285 (105.4 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 270 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 329
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 330 GAGGDNEVQRTMLELINQLDGFDPR 354
Score = 104 (41.7 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 270 AVANRTDACFIRVIGSELVQKYVGEGARM 298
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 362 (132.5 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 88/213 (41%), Positives = 126/213 (59%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA +FL V G+EL Y+GD K++ ++FR A + P+I+F+DEID++ R S
Sbjct: 516 AVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSHS 575
Query: 156 NSG-GEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIY-LPGDVKVIMATNRIET 213
SG G E R + LLN+LDG +V RR +++ L L D V+ ATNR +
Sbjct: 576 KSGHGVSE--RVLSVLLNELDGVGLKVTERRGNKLQLELEFQETLSRDFMVVAATNRPDM 633
Query: 214 LDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIK 273
LD AL+RPGR+DR I P PD K + I I T ++ L DV+LQ++ D SGADI+
Sbjct: 634 LDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSLQDIAARTDLFSGADIE 693
Query: 274 AICTEAGLMALRERRMKVT---NEDFKKSKESV 303
+C EA L+AL+E ++ T + F KS ++V
Sbjct: 694 NLCKEAALLALQENGLEATAVKHGHFVKSLQTV 726
Score = 154 (59.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 35/107 (32%), Positives = 60/107 (56%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+S ++R ++++ + L + + V+ ATNR + LDPAL RPGR DR++ P
Sbjct: 313 NSAPEDRLVAQLLTLLDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQ 372
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMAL 284
+R I + T M ++ D++L +L GAD+ A+C EA + A+
Sbjct: 373 RRSILQMLTCSMPISTDIDLVKLAEMTTGYVGADLTALCREAAMQAV 419
Score = 37 (18.1 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 54 VGVLS-DDTDPMVTAVANQTSATFLRVVGSELIQKYLGDGPKLAVA 98
V +LS D + QTS T V+ E + D K+ VA
Sbjct: 155 VEILSVDPVTEEAGLITPQTSVTIKEVITLERYRLLTEDTAKIPVA 200
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 287 (106.1 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 278 (102.9 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+ V+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 97 (39.2 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 17/29 (58%), Positives = 25/29 (86%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+ V+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIPVIGSELVQKYVGEGARM 256
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 287 (106.1 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 278 (102.9 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 50/85 (58%), Positives = 67/85 (78%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+ V+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 97 (39.2 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 17/29 (58%), Positives = 25/29 (86%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+ V+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIPVIGSELVQKYVGEGARM 256
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 285 (105.4 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPR 312
Score = 281 (104.0 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 60/139 (43%), Positives = 88/139 (63%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRKIEF LPD
Sbjct: 290 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH M++ D+ + L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 349 EGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 296 FKKSKESVL--YRKKEGTP 312
F ++ V+ Y K TP
Sbjct: 409 FLEAVNKVIKSYAKFSATP 427
Score = 104 (41.7 bits), Expect = 1.3e-33, Sum P(2) = 1.3e-33
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARM 256
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 286 (105.7 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +A I+F DE+DA+G R+D
Sbjct: 239 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDD 298
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+ QLDGFD R
Sbjct: 299 GAGGDNEVQRTMLELITQLDGFDPR 323
Score = 275 (101.9 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 58/130 (44%), Positives = 88/130 (67%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+ ATNR TLDPAL+RPGRIDRK+EF LPD
Sbjct: 301 GGDNEVQ-RTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDL 359
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE- 294
+ + IF IH+ M++ +D+ + + + +GA+++++CTEAG+ A+R RR KV NE
Sbjct: 360 EGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARR-KVANEK 418
Query: 295 DFKKSKESVL 304
DF K+ + V+
Sbjct: 419 DFLKAVDKVI 428
Score = 110 (43.8 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 19/29 (65%), Positives = 27/29 (93%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T ATF+RV+GSEL+QKY+G+G ++
Sbjct: 239 AVANRTDATFIRVIGSELVQKYVGEGARM 267
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 285 (105.4 bits), Expect = 6.7e-25, P = 6.7e-25
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDAVG R+D
Sbjct: 230 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDD 289
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 290 GQGGDNEVQRTMLELINQLDGFDPR 314
Score = 278 (102.9 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 60/142 (42%), Positives = 88/142 (61%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRK+EF LPD
Sbjct: 292 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDL 350
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ I IH +M++ D+ L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 351 AGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 410
Query: 296 FKKSKESVL--YRKKEGTPEGL 315
F ++ V+ Y K TP L
Sbjct: 411 FLEAINKVVKGYAKFSATPRYL 432
Score = 104 (41.7 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 230 AVANRTDACFIRVIGSELVQKYVGEGARM 258
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 285 (105.4 bits), Expect = 6.7e-25, P = 6.7e-25
Identities = 52/85 (61%), Positives = 67/85 (78%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF +A ++F DEIDAVG R+D
Sbjct: 230 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDD 289
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
GG+ E+QRTMLEL+NQLDGFD R
Sbjct: 290 GQGGDNEVQRTMLELINQLDGFDPR 314
Score = 278 (102.9 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 60/142 (42%), Positives = 88/142 (61%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+MATNR +TLDPAL+RPGR+DRK+EF LPD
Sbjct: 292 GGDNEVQ-RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDL 350
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ I IH +M++ D+ L + +GA+I+++CTEAG+ A+R RR T +D
Sbjct: 351 AGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 410
Query: 296 FKKSKESVL--YRKKEGTPEGL 315
F ++ V+ Y K TP L
Sbjct: 411 FLEAINKVVKGYAKFSATPRYL 432
Score = 104 (41.7 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 18/29 (62%), Positives = 26/29 (89%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T A F+RV+GSEL+QKY+G+G ++
Sbjct: 230 AVANRTDACFIRVIGSELVQKYVGEGARM 258
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 256 (95.2 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 306 EQARLDILKIHAGPITK 322
Score = 249 (92.7 bits), Expect = 3.9e-33, Sum P(3) = 3.9e-33
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 250 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 369 KAVRKVADSKK 379
Score = 74 (31.1 bits), Expect = 3.9e-33, Sum P(3) = 3.9e-33
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 214
Score = 69 (29.3 bits), Expect = 3.9e-33, Sum P(3) = 3.9e-33
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 116
Query: 63 PMVTAVANQ 71
P+V ++++
Sbjct: 117 PLVYNMSHE 125
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 282 (104.3 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 58/140 (41%), Positives = 89/140 (63%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L G++KV+MATNR +TLD AL+RPGRIDR+IEF LPD +
Sbjct: 279 DHEVQ-RTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEG 337
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ IF IH + M ++ DV + L + +G+DI+++CTEAG+ A+R RR +T +D
Sbjct: 338 RTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLL 397
Query: 298 KSKESVLYRKKEGTPEGLYL 317
+ V++ K+ + G Y+
Sbjct: 398 LAINKVIHGCKQFSATGKYM 417
Score = 269 (99.8 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 48/85 (56%), Positives = 70/85 (82%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+T A F+ V+GSEL+QKY+G+G ++VRELF++A+ I+FIDE+DA+G R D
Sbjct: 215 AIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDE 274
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
++ G+ E+QRTMLE++NQLDGFD+R
Sbjct: 275 SAHGDHEVQRTMLEIVNQLDGFDNR 299
Score = 95 (38.5 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
A+AN+T A F+ V+GSEL+QKY+G+G ++
Sbjct: 215 AIANRTDACFICVIGSELVQKYVGEGARM 243
Score = 37 (18.1 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 11 DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVT--AV 68
D I++ ++ V + V +E G V ++ + + +L DP VT V
Sbjct: 94 DQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTV 153
Query: 69 ANQTSATFLRVVG-SELIQK 87
+ T+ + G E ++K
Sbjct: 154 EEKPDITYNDIGGCKEQLEK 173
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 282 (104.3 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 58/140 (41%), Positives = 89/140 (63%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L G++KV+MATNR +TLD AL+RPGRIDR+IEF LPD +
Sbjct: 279 DHEVQ-RTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEG 337
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ IF IH + M ++ DV + L + +G+DI+++CTEAG+ A+R RR +T +D
Sbjct: 338 RTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEKDLL 397
Query: 298 KSKESVLYRKKEGTPEGLYL 317
+ V++ K+ + G Y+
Sbjct: 398 LAINKVIHGCKQFSATGKYM 417
Score = 269 (99.8 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 48/85 (56%), Positives = 70/85 (82%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+T A F+ V+GSEL+QKY+G+G ++VRELF++A+ I+FIDE+DA+G R D
Sbjct: 215 AIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDE 274
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
++ G+ E+QRTMLE++NQLDGFD+R
Sbjct: 275 SAHGDHEVQRTMLEIVNQLDGFDNR 299
Score = 95 (38.5 bits), Expect = 4.7e-33, Sum P(2) = 4.7e-33
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
A+AN+T A F+ V+GSEL+QKY+G+G ++
Sbjct: 215 AIANRTDACFICVIGSELVQKYVGEGARM 243
Score = 37 (18.1 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 11 DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVT--AV 68
D I++ ++ V + V +E G V ++ + + +L DP VT V
Sbjct: 94 DQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTV 153
Query: 69 ANQTSATFLRVVG-SELIQK 87
+ T+ + G E ++K
Sbjct: 154 EEKPDITYNDIGGCKEQLEK 173
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 256 (95.2 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 200 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 259
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 260 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 319
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 320 EQARLDILKIHAGPITK 336
Score = 249 (92.7 bits), Expect = 8.0e-33, Sum P(3) = 8.0e-33
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 264 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 383 KAVRKVADSKK 393
Score = 74 (31.1 bits), Expect = 8.0e-33, Sum P(3) = 8.0e-33
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 228
Score = 69 (29.3 bits), Expect = 8.0e-33, Sum P(3) = 8.0e-33
Identities = 17/69 (24%), Positives = 35/69 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 71 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 130
Query: 63 PMVTAVANQ 71
P+V ++++
Sbjct: 131 PLVYNMSHE 139
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 288 (106.4 bits), Expect = 5.1e-25, P = 5.1e-25
Identities = 53/85 (62%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +A I+F DEIDAVG R+D
Sbjct: 262 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDD 321
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+ QLDGFD R
Sbjct: 322 GAGGDNEVQRTMLELITQLDGFDPR 346
Score = 272 (100.8 bits), Expect = 9.7e-33, Sum P(2) = 9.7e-33
Identities = 57/138 (41%), Positives = 88/138 (63%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+ ATNR TLDPAL+RPGRIDRK+EF LPD
Sbjct: 324 GGDNEVQ-RTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDL 382
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IF IH+ M++ + + + + +GA+++++CTEAG+ A+R RR T +D
Sbjct: 383 EGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKD 442
Query: 296 FKKSKESVL--YRKKEGT 311
F K+ + V+ Y+K T
Sbjct: 443 FLKAVDKVISGYKKFSST 460
Score = 110 (43.8 bits), Expect = 9.7e-33, Sum P(2) = 9.7e-33
Identities = 19/29 (65%), Positives = 27/29 (93%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T ATF+RV+GSEL+QKY+G+G ++
Sbjct: 262 AVANRTDATFIRVIGSELVQKYVGEGARM 290
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 299 (110.3 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 55/87 (63%), Positives = 71/87 (81%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT ATFL++ G +L+Q ++GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS
Sbjct: 223 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 282
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
G+RE+QRTMLELLNQLDGF +Q
Sbjct: 283 EKAGDREVQRTMLELLNQLDGFQPNMQ 309
Score = 219 (82.2 bits), Expect = 8.3e-27, Sum P(3) = 8.3e-27
Identities = 48/108 (44%), Positives = 66/108 (61%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKVI ATNR++ LDPAL+R GR+DRKIEFP+P+E+
Sbjct: 287 DREVQ-RTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 345
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALR 285
+ RI IH+ +M ++ DVN +EL K EAG++ALR
Sbjct: 346 RARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALR 393
Score = 87 (35.7 bits), Expect = 8.3e-27, Sum P(3) = 8.3e-27
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT ATFL++ G +L+Q ++GDG KL
Sbjct: 220 LARACAAQTKATFLKLAGPQLVQMFIGDGAKL 251
Score = 71 (30.1 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+
Sbjct: 106 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM 159
Score = 38 (18.4 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 92 GPKLAVANQTSAT-FLRVVGSELIQKYL-GDGPKLVRELFRVAEE---HAPSIVFIDEID 146
G + T T FL V+G +K GD + ++ + + E S V E+D
Sbjct: 103 GKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVD 162
Query: 147 AVGTKRYDSNSGGEREIQ 164
T++Y G +++IQ
Sbjct: 163 ERPTEQYSDIGGLDKQIQ 180
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 287 (106.1 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 54/89 (60%), Positives = 73/89 (82%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A Q+ ATFL++ +L+Q ++GDG KLVR+ F +A+E AP+I+FIDE+DA+GTKR+DS
Sbjct: 253 ACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDS 312
Query: 156 NSGGEREIQRTMLELLNQLDGF--DSRVQ 182
+ G+RE+QRTMLELLNQLDGF D RV+
Sbjct: 313 DKSGDREVQRTMLELLNQLDGFGSDDRVK 341
Score = 257 (95.5 bits), Expect = 3.3e-32, Sum P(3) = 3.3e-32
Identities = 55/133 (41%), Positives = 83/133 (62%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKV+ ATNR++TLDPAL+R GR+DRKIEFPLP E+
Sbjct: 317 DREVQ-RTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEA 375
Query: 238 KRRIFNIHTSRMTLAED-VNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 296
+ + IH ++ + VN +EL + D+ +GA +KA+ EAG++ALR + + +EDF
Sbjct: 376 RESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDF 435
Query: 297 KKSKESVLYRKKE 309
++ V RK +
Sbjct: 436 VEAISEVQARKSK 448
Score = 77 (32.2 bits), Expect = 3.3e-32, Sum P(3) = 3.3e-32
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A Q+ ATFL++ +L+Q ++GDG KL
Sbjct: 250 LARACAAQSGATFLKLAAPQLVQMFIGDGAKL 281
Score = 58 (25.5 bits), Expect = 3.3e-32, Sum P(3) = 3.3e-32
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAV 68
A++ TS ++ ++ VD +L+P + +N + V+ L + D V A+
Sbjct: 136 AVIKTSTRQTIFLPMIGLVDPSKLKPNDLIGVNKDSYLVLDTLPSEYDSRVKAM 189
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 221 (82.9 bits), Expect = 3.4e-32, Sum P(3) = 3.4e-32
Identities = 47/106 (44%), Positives = 69/106 (65%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V +R L+++ + + I +V V+ ATNR + +D AL+RPGRIDR I PLPD T+R
Sbjct: 745 VADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRRE 804
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRE 286
I N+ M ++ +V+L EL++ D SGA+I A+C EA L+AL E
Sbjct: 805 ILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEE 850
Score = 180 (68.4 bits), Expect = 3.4e-32, Sum P(3) = 3.4e-32
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN++ FL + G EL+ KY+G+ + VRE+FR A APSI+F DE+DA+ +R S
Sbjct: 680 ALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVER-GS 738
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+SG R + +LL ++DG +
Sbjct: 739 SSGAGNVADRVLAQLLTEMDGIE 761
Score = 149 (57.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 44/123 (35%), Positives = 62/123 (50%)
Query: 175 DGFDSRVQNRRLSEVYSSLTLIYLPGD---VKVIMATNRIETLDPALIRPGRIDRKIEFP 231
+G S V+ R ++ + + + I G V V+ ATNR + LD AL RPGR D++IE
Sbjct: 463 EGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIG 522
Query: 232 LPDEKTKRRIFNIHTSRMT-LAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMK 290
+P+ + + I R+ L L L GAD+KA+C EAGL ALR K
Sbjct: 523 IPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRK 582
Query: 291 VTN 293
N
Sbjct: 583 QPN 585
Score = 133 (51.9 bits), Expect = 7.8e-26, Sum P(2) = 7.8e-26
Identities = 31/88 (35%), Positives = 52/88 (59%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+ A + G E+I K+ G+ +R++F A PSI+FIDE+DA+ KR +
Sbjct: 406 AVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGA 465
Query: 156 NSGGEREIQRTMLELLNQL--DGFDSRV 181
S E+ + ++L L++ + +G + RV
Sbjct: 466 QSEVEKRVVASLLTLMDGIGSEGSEGRV 493
Score = 64 (27.6 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPK 94
A+AN++ FL + G EL+ KY+G+ +
Sbjct: 680 ALANESGLNFLAIKGPELMNKYVGESER 707
Score = 47 (21.6 bits), Expect = 3.4e-32, Sum P(3) = 3.4e-32
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+ A + G E+I K+ G+
Sbjct: 406 AVANEVGAYVSVINGPEIISKFYGE 430
Score = 38 (18.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 273 KAICTEAGLMALRERRMKVTNEDFKKSKESV--LYRK 307
KA+ E+GL L + ++ N+ +S+ +V ++RK
Sbjct: 679 KALANESGLNFLAIKGPELMNKYVGESERAVREIFRK 715
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 225 (84.3 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 48/106 (45%), Positives = 69/106 (65%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V +R L+++ + + I DV ++ ATNR + +D AL+RPGRIDR I PLPD T+R
Sbjct: 745 VADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRRE 804
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRE 286
IF + M ++ +V+L ELI+ D SGA+I A+C EA L+AL E
Sbjct: 805 IFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEE 850
Score = 171 (65.3 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 34/83 (40%), Positives = 52/83 (62%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN++ FL + G EL+ KY+G+ + VRE FR A APSI+F DE+DA+ +R S
Sbjct: 680 ALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVER-GS 738
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+ G R + +LL ++DG +
Sbjct: 739 SLGAGNVADRVLAQLLTEMDGIE 761
Score = 154 (59.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 49/138 (35%), Positives = 67/138 (48%)
Query: 158 GGEREIQ-RTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDP 216
G + E++ R + LL +DG S V SE G V V+ ATNR LD
Sbjct: 464 GAQNEVEKRVVASLLTLMDGIGSEV-----SE-----------GQVLVLGATNRPHALDA 507
Query: 217 ALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMT-LAEDVNLQELIMAKDDLSGADIKAI 275
AL RPGR D++IE +P+ + + I R+ L + L +L + GAD+K +
Sbjct: 508 ALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVL 567
Query: 276 CTEAGLMALRERRMKVTN 293
C EAGL ALR K N
Sbjct: 568 CNEAGLCALRRILKKQPN 585
Score = 136 (52.9 bits), Expect = 7.2e-27, Sum P(2) = 7.2e-27
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+ A + G E+I K+ G+ +R++F A PSI+FIDE+DA+ KR
Sbjct: 406 AVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--- 462
Query: 156 NSGGEREIQ-RTMLELLNQLDGFDSRV 181
G + E++ R + LL +DG S V
Sbjct: 463 -EGAQNEVEKRVVASLLTLMDGIGSEV 488
Score = 64 (27.6 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPK 94
A+AN++ FL + G EL+ KY+G+ +
Sbjct: 680 ALANESGLNFLAIKGPELMNKYVGESER 707
Score = 47 (21.6 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+ A + G E+I K+ G+
Sbjct: 406 AVANEVGAYVSVINGPEIISKFYGE 430
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 53/83 (63%), Positives = 74/83 (89%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN T+A F+RVVGSE +QKYLG+GP++VR++FR+A E+AP+I+FIDEIDA+ TKR+D+
Sbjct: 187 AVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDA 246
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+G +RE+QR ++ELL Q+DGFD
Sbjct: 247 QTGADREVQRILIELLTQMDGFD 269
Score = 251 (93.4 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 59/139 (42%), Positives = 84/139 (60%)
Query: 162 EIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRP 221
EI + + G D VQ R L E+ + + +VKVIMATNR +TLDPAL+RP
Sbjct: 235 EIDAIATKRFDAQTGADREVQ-RILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRP 293
Query: 222 GRIDRKIEFP-LPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAG 280
GR+DRKIEFP D + +R +F T++M L+ +V+L IM D SGA I AI +AG
Sbjct: 294 GRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAG 353
Query: 281 LMALRERRMKVTNEDFKKS 299
L+A+R+ R + D +++
Sbjct: 354 LLAVRKSRGVILQSDIEEA 372
Score = 118 (46.6 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 21/32 (65%), Positives = 28/32 (87%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+V AVAN T+A F+RVVGSE +QKYLG+GP++
Sbjct: 184 LVKAVANSTAANFIRVVGSEFVQKYLGEGPRM 215
Score = 116 (45.9 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 33/122 (27%), Positives = 62/122 (50%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G E ID N AIV ++ GS + V ILS +D++ L+P SV L +A+V +L + D
Sbjct: 58 IGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEAD 117
Query: 63 PMVTAVA--NQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
++ + + ++ V G ++ ++ + + +L + T R +G + + L
Sbjct: 118 SSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPL---TQGDLYRQIGIDPPRGVLLY 174
Query: 121 GP 122
GP
Sbjct: 175 GP 176
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 291 (107.5 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 55/89 (61%), Positives = 73/89 (82%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A QT+ATFL++ +L+Q Y+G+G KLVR+ F +A+E AP+I+FIDE+DA+GTKR+DS
Sbjct: 234 ACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDS 293
Query: 156 NSGGEREIQRTMLELLNQLDGF--DSRVQ 182
G+RE+QRTMLELLNQLDGF D RV+
Sbjct: 294 EKSGDREVQRTMLELLNQLDGFSSDDRVK 322
Score = 286 (105.7 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 59/132 (44%), Positives = 85/132 (64%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D VQ R + E+ + L VKV+ ATNR++ LDPAL+R GR+DRKIEFPLP E +
Sbjct: 298 DREVQ-RTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDS 356
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ +I IH+ +MT +D+N QEL + D+ +GA +KA+ EAG++ALR + V +EDF
Sbjct: 357 RAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFV 416
Query: 298 KSKESVLYRKKE 309
+ V RK +
Sbjct: 417 EGISEVQARKSK 428
Score = 82 (33.9 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A A QT+ATFL++ +L+Q Y+G+G KL
Sbjct: 231 LARACAAQTNATFLKLAAPQLVQMYIGEGAKL 262
Score = 63 (27.2 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTA--VANQT 72
A+V TS ++ ++ VD D+L+P V +N + ++ L + D V A V +
Sbjct: 117 AVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKP 176
Query: 73 SATFLRVVG 81
+ T+ V G
Sbjct: 177 TETYSDVGG 185
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 296 (109.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 53/84 (63%), Positives = 72/84 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 153 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 212
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
SGG+ E+QRTMLELLNQLDGF++
Sbjct: 213 GSGGDSEVQRTMLELLNQLDGFEA 236
Score = 93 (37.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 150 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 181
Score = 63 (27.2 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 24 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 83
Query: 63 PMVT 66
P+V+
Sbjct: 84 PLVS 87
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 290 (107.1 bits), Expect = 2.0e-25, P = 2.0e-25
Identities = 53/85 (62%), Positives = 69/85 (81%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +A I+F DEIDAVG R+D
Sbjct: 238 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDD 297
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+ QLDGFD+R
Sbjct: 298 GAGGDNEVQRTMLELITQLDGFDAR 322
Score = 256 (95.2 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
Identities = 53/129 (41%), Positives = 81/129 (62%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+ ATNR TLDPAL+RPGRIDRKIEF LPD
Sbjct: 300 GGDNEVQ-RTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDV 358
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH M++ D+ + + + +GA+++++ TEAG+ A+R RR T +D
Sbjct: 359 EGRANILRIHAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRARRKVATEKD 418
Query: 296 FKKSKESVL 304
F + + V+
Sbjct: 419 FLAAVDKVI 427
Score = 110 (43.8 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
Identities = 19/29 (65%), Positives = 27/29 (93%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T ATF+RV+GSEL+QKY+G+G ++
Sbjct: 238 AVANRTDATFIRVIGSELVQKYVGEGARM 266
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 246 (91.7 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 55/134 (41%), Positives = 78/134 (58%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + G K+IMATNR +TLDPAL+R GR+DRKIE LP+E
Sbjct: 289 DREIQ-RTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ IF IHTS++ + + + + D +GADI+ + TEAG A+R+ R + D
Sbjct: 348 RLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLM 407
Query: 298 KSKESVLYRKK-EG 310
K+ V KK EG
Sbjct: 408 KAVRKVADVKKLEG 421
Score = 234 (87.4 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 41/89 (46%), Positives = 63/89 (70%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA A F+ S ++ KY+G+ +L+RE+F A+EH P I+F+DE+DA+G +R+
Sbjct: 225 AVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSE 284
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNR 184
+ +REIQRT++ELLNQ+DGFD+ Q +
Sbjct: 285 GTSADREIQRTLMELLNQMDGFDTLGQTK 313
Score = 81 (33.6 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + + +DD IV TS G + V + + K+ L+ G V L+ ++ +L + D
Sbjct: 96 IGEVLKQLDDERYIVKTSSGPRYIVGCRNTIKKENLKNGVRVSLDMTTLTIMRILPREVD 155
Query: 63 PMV 65
P+V
Sbjct: 156 PLV 158
Score = 49 (22.3 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA A F+ S ++ KY+G+ +L
Sbjct: 222 LAKAVAATIGANFIFSPASAIVDKYIGESARL 253
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 287 (106.1 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +A I+F DEIDA+G R+D
Sbjct: 232 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDD 291
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+GG+ E+QRTMLEL+ QLDGFD R
Sbjct: 292 GAGGDNEVQRTMLELITQLDGFDPR 316
Score = 251 (93.4 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 52/129 (40%), Positives = 80/129 (62%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D+ VQ R + E+ + L G++KV+ ATNR TLD AL+RPGRIDRK+EF LPD
Sbjct: 294 GGDNEVQ-RTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDL 352
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + I IH M + +D+ + + +GA+++++CTEAG+ A+R RR T +D
Sbjct: 353 EGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKD 412
Query: 296 FKKSKESVL 304
F + + V+
Sbjct: 413 FLDAVQKVV 421
Score = 110 (43.8 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 19/29 (65%), Positives = 27/29 (93%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPKL 95
AVAN+T ATF+RV+GSEL+QKY+G+G ++
Sbjct: 232 AVANRTDATFIRVIGSELVQKYVGEGARM 260
Score = 44 (20.5 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 7 EEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVT 66
E+ + N +++ ++ VS+ V +E G V + +A+ L DP VT
Sbjct: 107 EQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVT 166
Query: 67 A--VANQTSATFLRVVG-SELIQK 87
V + T+ V G E I++
Sbjct: 167 MMQVEEKPDVTYGDVGGCKEQIER 190
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 215 (80.7 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 41/101 (40%), Positives = 63/101 (62%)
Query: 204 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMA 263
V+ ATNR + LDPAL+RPGR DR++ PLPD K + I +H +++ LA+DV +
Sbjct: 297 VMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARG 356
Query: 264 KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ I EA L A RE + V+ +F+++K+ ++
Sbjct: 357 TPGFSGADLANIVNEAALFAARENKKDVSMSEFERAKDKIM 397
Score = 175 (66.7 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 34/85 (40%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + F + GS+ ++ ++G G VR++F A++ AP I+FIDEIDAVG R
Sbjct: 208 AVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHRGAG 267
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
GG E ++T+ +LL ++DGF+ +
Sbjct: 268 LGGGHDEREQTLNQLLVEMDGFEGK 292
Score = 49 (22.3 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ AVA + F + GS+ ++ ++G G
Sbjct: 205 LAKAVAGEAKVPFFTISGSDFVEMFVGVG 233
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 76/184 (41%), Positives = 109/184 (59%)
Query: 15 AIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAVANQTSA 74
A++ TS +++ ++ VD ++L+PG V +N + ++ L + D V A+ A
Sbjct: 87 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAM-ELVEA 145
Query: 75 TFLRVVGSELIQK-----------Y--LGDGPKL---AVANQTSATFLRVVGSELIQKYL 118
L + E + Y G G L A A QT ATFL++ G +L+Q ++
Sbjct: 146 IVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFI 205
Query: 119 GDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD 178
GDG KLVR+ F +A+E APSI+FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF
Sbjct: 206 GDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQ 265
Query: 179 SRVQ 182
Q
Sbjct: 266 PNTQ 269
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 93/325 (28%), Positives = 157/325 (48%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 68 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 127
Query: 63 PMVTA--VANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
P+V+ V +T+ + G + K + + +L V + L + + + Y G
Sbjct: 128 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLY-GP 186
Query: 121 GPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE-REI------QRTMLELLNQ 173
P + L A H FI + +++ RE+ + +++
Sbjct: 187 -PGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 245
Query: 174 LDGFDSRVQN---------RRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRI 224
+D SR++ R + E+ + L ++KVIMATNRI+ LD AL+RPGRI
Sbjct: 246 IDSIGSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRI 305
Query: 225 DRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMAL 284
DRKIEFP P+E+ + I IH+ +M L +NL+++ SGA++K +CTEAG+ AL
Sbjct: 306 DRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYAL 365
Query: 285 RERRMKVTNEDFKKSKESVLYRKKE 309
RERR+ VT EDF+ + V+ + E
Sbjct: 366 RERRVHVTQEDFEMAVAKVMQKDSE 390
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 264 (98.0 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 57/137 (41%), Positives = 82/137 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + G K+IMATNR +TLDPAL+RPGR+DRK+E PLP+E
Sbjct: 298 DREIQ-RTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAG 356
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ IF IHT+++ + + + + D +GADI+ TEAG A+R+ R + +D
Sbjct: 357 RLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLM 416
Query: 298 KSKESVLYRKK-EGTPE 313
K+ V KK EGT E
Sbjct: 417 KAVRKVAEVKKLEGTIE 433
Score = 230 (86.0 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 52/141 (36%), Positives = 81/141 (57%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA A F+ S ++ KY+G+ +++RE+F A+EH P I+F+DE+DA+G +R+
Sbjct: 234 AVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSE 293
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELL Q+DGFD+ Q + + TL + PG D KV I N
Sbjct: 294 GTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 353
Query: 210 RIETLDPALIRPGRIDRKIEF 230
L+ I ++ + EF
Sbjct: 354 EAGRLEIFKIHTAKVKKTGEF 374
Score = 81 (33.6 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + + + + IV S G + V + + VD+ +L+ G V L+ ++ +L +TD
Sbjct: 105 IGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETD 164
Query: 63 PMVTAVAN--QTSATFLRVVG-SELIQK 87
P+V + + Q TF + G +E I++
Sbjct: 165 PLVYNMTSFEQGEITFDGIGGLTEQIRE 192
Score = 46 (21.3 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA A F+ S ++ KY+G+ ++
Sbjct: 231 LAKAVAATIGANFIFSPASGIVDKYIGESARI 262
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 207 (77.9 bits), Expect = 7.3e-29, Sum P(2) = 7.3e-29
Identities = 43/103 (41%), Positives = 61/103 (59%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V ++ ATNR + LDPAL+RPGR DR + PD K + +I +H + L DV+L+ +
Sbjct: 295 VIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIA 354
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA LMA R R VT EDF+ +K+ V+
Sbjct: 355 RGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAKDKVM 397
Score = 178 (67.7 bits), Expect = 7.3e-29, Sum P(2) = 7.3e-29
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + F + GS+ ++ ++G G VR++F A+++AP IVFIDEIDAVG R
Sbjct: 208 AIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAG 267
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
GG E ++T+ +LL ++DGF++
Sbjct: 268 YGGGNDEREQTLNQLLVEMDGFEA 291
Score = 48 (22.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + F + GS+ ++ ++G G
Sbjct: 205 LARAIAGEAGVPFFTISGSDFVEMFVGVG 233
Score = 39 (18.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 76 FLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGDGPKL 124
FL ++ L + G G L +T + F+ V + K + DG ++
Sbjct: 16 FLLILA--LFNLFSGSGGTLQSQEKTYSEFVSAVDEGNVTKVILDGEQI 62
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 207 (77.9 bits), Expect = 7.3e-29, Sum P(2) = 7.3e-29
Identities = 43/103 (41%), Positives = 61/103 (59%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V ++ ATNR + LDPAL+RPGR DR + PD K + +I +H + L DV+L+ +
Sbjct: 295 VIILAATNRKDVLDPALLRPGRFDRNVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIA 354
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA LMA R R VT EDF+ +K+ V+
Sbjct: 355 RGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAKDKVM 397
Score = 178 (67.7 bits), Expect = 7.3e-29, Sum P(2) = 7.3e-29
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + F + GS+ ++ ++G G VR++F A+++AP IVFIDEIDAVG R
Sbjct: 208 AIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAG 267
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
GG E ++T+ +LL ++DGF++
Sbjct: 268 YGGGNDEREQTLNQLLVEMDGFEA 291
Score = 48 (22.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + F + GS+ ++ ++G G
Sbjct: 205 LARAIAGEAGVPFFTISGSDFVEMFVGVG 233
Score = 39 (18.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 76 FLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGDGPKL 124
FL ++ L + G G L +T + F+ V + K + DG ++
Sbjct: 16 FLLILA--LFNLFSGSGGTLQSQEKTYSEFVSAVDEGNVTKVILDGEQI 62
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 330 (121.2 bits), Expect = 8.1e-29, P = 8.1e-29
Identities = 83/226 (36%), Positives = 126/226 (55%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A +F+ V G++L ++GD K++ ++FR A + P+IVF+DEID++ R S
Sbjct: 553 ALATSCHCSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSILGSR--S 610
Query: 156 NSGGEREIQRTMLE-LLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
S E +Q +L LLN+LDG + RR S+ +V ++ ATNR + L
Sbjct: 611 ISKTECNVQERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVL 670
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL+RPGR+D+ I P PDEK + I + T M + DV+L+ + SGAD+
Sbjct: 671 DDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAETCFFSGADLGN 730
Query: 275 ICTEAGLMALRERRMKVTN---EDFKKSKESVLYRKKEGTPEGLYL 317
+C EA L+AL+E ++ T E F KS ++V K +PE L L
Sbjct: 731 LCKEAALLALQENGLEATTVKQEHFLKSLKTV---KPSLSPEDLTL 773
Score = 172 (65.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 40/103 (38%), Positives = 60/103 (58%)
Query: 182 QNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRI 241
++R +++V + L I DV V+ +TNR + LDPAL RPGR DR++ P K ++ I
Sbjct: 354 ESRAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAI 413
Query: 242 FNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMAL 284
+ TS+M ++ V+L L GAD+ A+C EA L AL
Sbjct: 414 LQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHAL 456
Score = 84 (34.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKR 152
AVA + A L V L G+ + VR +F A E A P+++F+DE+DA+ +R
Sbjct: 287 AVAREAGAELLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRR 346
Query: 153 YDSNSGGEREIQRTMLELLNQLDG 176
++ E R + ++L LDG
Sbjct: 347 GGAHRAPE---SRAVAQVLTLLDG 367
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 329 (120.9 bits), Expect = 9.3e-29, P = 9.3e-29
Identities = 77/211 (36%), Positives = 119/211 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A +F+ V G++L ++GD K++ ++FR A P+I+F+DEID++ R S
Sbjct: 517 ALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSAS 576
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLD 215
+G + + +R + LLN+LDG + RR S+ V +I ATNR + LD
Sbjct: 577 KTGCDVQ-ERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLD 635
Query: 216 PALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAI 275
AL+RPGR+D+ I P PD K + I + T M + DV+L+ L SGAD++ +
Sbjct: 636 TALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNL 695
Query: 276 CTEAGLMALRERRMKVTN---EDFKKSKESV 303
CTEA L+AL+E + T E F KS ++V
Sbjct: 696 CTEAALLALQENGLDATTVKQEHFLKSLKTV 726
Score = 163 (62.4 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 63/196 (32%), Positives = 94/196 (47%)
Query: 106 LRVVGSELIQKYLGDGPKLV--RELFR-VAEEHAPSIVFIDEIDAVGTKRYDSNSGGERE 162
L +G + + L GP V +L R VA E ++ + G++ ++ R
Sbjct: 226 LTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRV 285
Query: 163 IQRTMLELLNQ------LDGFDSRVQNR--RLSE---VYSSLTLIY-LPGDVKVIM--AT 208
QR EL ++ LD D+ R R E V LTL+ GD +V++ AT
Sbjct: 286 FQRAR-ELASRGPSLLFLDEMDALCPQRGSRAPESRVVAQVLTLLDGASGDREVVVVGAT 344
Query: 209 NRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLS 268
NR + LDPAL RPGR DR++ P K ++ I + TS+M ++ V+L L
Sbjct: 345 NRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYV 404
Query: 269 GADIKAICTEAGLMAL 284
GAD+ A+C EA + AL
Sbjct: 405 GADLTALCREAAMHAL 420
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 261 (96.9 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 55/131 (41%), Positives = 80/131 (61%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 250 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQA 308
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH+ +T D++ + ++ D +GAD++ +CTEAG+ A+R VT EDF
Sbjct: 309 RLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFM 368
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 369 KAVRKVADSKK 379
Score = 257 (95.5 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPN 305
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 306 EQARLDILKIHSGPITK 322
Score = 74 (31.1 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 214
Score = 73 (30.8 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 116
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ S ++ + G SE I++
Sbjct: 117 PLVYNMSHEDPGSVSYSEIGGLSEQIRE 144
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 326 (119.8 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 75/211 (35%), Positives = 121/211 (57%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A +F+ V G++L ++GD K++ ++F+ A + P++VF+DEID++ R S
Sbjct: 519 ALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSIS 578
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLD 215
+G + +R + LLN+LDG + RR S+ +V ++ ATNR + LD
Sbjct: 579 KTGCNVQ-ERVLSVLLNELDGVGLKTIERRGSKSDQHEFQEVFNSNVMIVAATNRPDVLD 637
Query: 216 PALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAI 275
AL+RPGR+D+ I P PDEK++ I + T M + DV+L+ L SGAD+ +
Sbjct: 638 DALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLAAETCLFSGADLGNL 697
Query: 276 CTEAGLMALRERRMKVTN---EDFKKSKESV 303
C EA L+AL+E ++ T E F KS ++V
Sbjct: 698 CKEAALLALQENGLEATTVKQEHFLKSLKTV 728
Score = 155 (59.6 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 37/103 (35%), Positives = 59/103 (57%)
Query: 182 QNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRI 241
++R +++V + L I +V V+ +TNR + LDPAL RPGR DR++ P ++ I
Sbjct: 320 ESRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAI 379
Query: 242 FNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMAL 284
+ TS+M ++ V+L L GAD+ A+C EA + AL
Sbjct: 380 LQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMHAL 422
Score = 92 (37.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKR 152
AVA + A L V L G+ + VR +F+ A+E A P+++F+DE+DA+ +R
Sbjct: 253 AVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRR 312
Query: 153 YDSNSGGEREIQRTMLELLNQLDG 176
+ E + +L LL+ + G
Sbjct: 313 GGPHQAPESRVVAQVLTLLDGISG 336
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 287 (106.1 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 52/81 (64%), Positives = 69/81 (85%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 183 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 242
Query: 156 NSGGEREIQRTMLELLNQLDG 176
SGG+ E+QRTMLELLNQLDG
Sbjct: 243 GSGGDSEVQRTMLELLNQLDG 263
Score = 45 (20.9 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 37 QLEPGCSVLLNHKVHAVVGVLSDDTDPMVT 66
++ P C V L + + + +L + DP+V+
Sbjct: 88 KVTPNCRVALRNDSYTLHKILPNKVDPLVS 117
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 200 (75.5 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 38/84 (45%), Positives = 57/84 (67%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A + + F+ V GSE ++ ++G GP VR++F +A +HAP I+FIDEIDAVG KR
Sbjct: 380 ATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGK 439
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
GG E + T+ +LL ++DGF++
Sbjct: 440 TFGGHSEQENTLNQLLVEMDGFNT 463
Score = 186 (70.5 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 41/106 (38%), Positives = 62/106 (58%)
Query: 201 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQEL 260
+V V+ ATNR++ LD AL+RPGR DR+I P PD K + IF +H + + D N
Sbjct: 466 NVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSLDKNELSR 525
Query: 261 IMAK--DDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
MA +GADI +C EA L+A R+ + + + F+++ E V+
Sbjct: 526 KMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVI 571
Score = 58 (25.5 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGP 93
+ A A + + F+ V GSE ++ ++G GP
Sbjct: 377 LAKATAGEANVPFITVSGSEFLEMFVGVGP 406
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 325 (119.5 bits), Expect = 2.5e-28, P = 2.5e-28
Identities = 73/211 (34%), Positives = 121/211 (57%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A +F+ V G++L ++GD K++ ++FR A + P++VF+DEID+V R
Sbjct: 512 ALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVG 571
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLD 215
+SG + +R + LLN+LDG R RR S+ L V +++ATNR + LD
Sbjct: 572 SSGCDAR-ERVLSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLD 630
Query: 216 PALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAI 275
AL+RPGR+D+ + P PD + + I + T+ M + +V+L+ L SGAD++ +
Sbjct: 631 DALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLENLAAETCYFSGADLRNL 690
Query: 276 CTEAGLMALRERRMKVTN---EDFKKSKESV 303
C EA L AL+E ++ T E F ++ ++V
Sbjct: 691 CKEAALFALQENGLEATTVEQEHFTEALKTV 721
Score = 163 (62.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 40/126 (31%), Positives = 67/126 (53%)
Query: 182 QNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRI 241
++R +++V + L I+ +V V+ ATNR + LDPAL RPGR DR++ P K + I
Sbjct: 313 ESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAI 372
Query: 242 FNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 301
+ TS+M ++ ++L L GAD+ A+C EA AL + N +++
Sbjct: 373 LGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKNEKNQNNPKIEETDF 432
Query: 302 SVLYRK 307
++K
Sbjct: 433 LEAFKK 438
Score = 92 (37.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKR 152
AVA + A L V L G+ + VR +F+ A+E A PS++F+DE+DA+ +R
Sbjct: 246 AVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRR 305
Query: 153 YDSNSGGEREIQRTMLELLNQLDG 176
E + +L LL+ + G
Sbjct: 306 GGPQRAPESRVVAQVLTLLDGIHG 329
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 203 (76.5 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 44/105 (41%), Positives = 66/105 (62%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTS--RMTLAEDVNLQE 259
V VI ATNR++ LD AL+RPGR DR+I P+PD K + IF +H R +L + V ++
Sbjct: 434 VIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRK 493
Query: 260 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
L SGADI +C EA L+A R+ +++N+ F+++ E V+
Sbjct: 494 LAAHTPGFSGADISNVCNEAALIAARDANHEISNKHFEQAIERVV 538
Score = 180 (68.4 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A + + F+ V GSE ++ ++G GP VR++F +A +++P I+FIDEIDAVG KR
Sbjct: 345 ATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGK 404
Query: 156 NS-GGEREIQRTMLELLNQLDGF 177
GG E + T+ +LL ++DGF
Sbjct: 405 GGMGGHSEQENTLNQLLVEMDGF 427
Score = 58 (25.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGP 93
+ A A + + F+ V GSE ++ ++G GP
Sbjct: 342 LAKATAGEANVPFITVSGSEFLEMFVGVGP 371
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 257 (95.5 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 57/136 (41%), Positives = 83/136 (61%)
Query: 178 DSRVQNRRLSEVYSSLT-LIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 236
D +Q R L E+ + + YL G K+IMATNR +TLDPAL+RPGR+DRKIE PLP+E
Sbjct: 249 DREIQ-RTLMELLNQMDGFDYL-GQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEV 306
Query: 237 TKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF 296
+ I IH +++ +++ + L+ D +GAD++ + TEAG +A++E R V D
Sbjct: 307 GRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDL 366
Query: 297 KKSKESVLYRKK-EGT 311
+ V KK EGT
Sbjct: 367 MSAARKVADLKKLEGT 382
Score = 248 (92.4 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 66/189 (34%), Positives = 103/189 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA FL+VV S ++ KY+G+ +++RE+F A+EH P ++F+DEIDA+G +R+
Sbjct: 185 AVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSE 244
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD Q + + TL + PG D K+ I N
Sbjct: 245 GTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPN 304
Query: 210 ---RIETLDPAL---IRPGRIDRKIEFPLPDEKTKRRIFNIHTSR--MTLAEDVNLQELI 261
R+E L L + G ID + L D + N+ T + + ED ++ +
Sbjct: 305 EVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKED---RDYV 361
Query: 262 MAKDDLSGA 270
+ D +S A
Sbjct: 362 IQSDLMSAA 370
Score = 73 (30.8 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 29/109 (26%), Positives = 52/109 (47%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
+G + + +D IV S G + V + VD+ L G V L+ ++ +L + D
Sbjct: 56 IGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVD 115
Query: 63 PMV--TAVANQTSATFLRVVG-SELIQKYLGDGPKLAVANQTSATFLRV 108
P+V ++ + +F V G +E I++ L + +L + N FLRV
Sbjct: 116 PLVYNMSIEDPGDISFAGVGGLNEQIRE-LREVIELPLKNPE--LFLRV 161
Score = 63 (27.2 bits), Expect = 4.9e-27, Sum P(2) = 4.9e-27
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA FL+VV S ++ KY+G+ ++
Sbjct: 182 LARAVAASLGVNFLKVVSSAIVDKYIGESARI 213
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 197 (74.4 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 40/103 (38%), Positives = 63/103 (61%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V +I ATNR + LDPAL+RPGR DR++ +PD + +I +H ++ LA DV+L+ +
Sbjct: 297 VVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIA 356
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L+A R + VT DF+ +++ V+
Sbjct: 357 RGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEYARDKVM 399
Score = 181 (68.8 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 33/84 (39%), Positives = 55/84 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + + F + GS+ ++ ++G G VR++F ++HAP I+F+DEIDAVG R
Sbjct: 210 AIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIG 269
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
GG E ++T+ +LL ++DGF+S
Sbjct: 270 LGGGNDEREQTLNQLLVEMDGFES 293
Score = 49 (22.3 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + + F + GS+ ++ ++G G
Sbjct: 207 LARAIAGEANVPFFSISGSDFVEMFVGVG 235
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 197 (74.4 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 40/103 (38%), Positives = 63/103 (61%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V +I ATNR + LDPAL+RPGR DR++ +PD + +I +H ++ LA DV+L+ +
Sbjct: 297 VVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREKIIAVHAKKVPLAPDVDLRVIA 356
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L+A R + VT DF+ +++ V+
Sbjct: 357 RGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEYARDKVM 399
Score = 181 (68.8 bits), Expect = 6.6e-28, Sum P(2) = 6.6e-28
Identities = 33/84 (39%), Positives = 55/84 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + + F + GS+ ++ ++G G VR++F ++HAP I+F+DEIDAVG R
Sbjct: 210 AIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIG 269
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
GG E ++T+ +LL ++DGF+S
Sbjct: 270 LGGGNDEREQTLNQLLVEMDGFES 293
Score = 49 (22.3 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + + F + GS+ ++ ++G G
Sbjct: 207 LARAIAGEANVPFFSISGSDFVEMFVGVG 235
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 256 (95.2 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 178 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 237
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 238 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 297
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 298 EQARLDILKIHAGPITK 314
Score = 249 (92.7 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 242 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 300
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 301 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 360
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 361 KAVRKVADSKK 371
Score = 74 (31.1 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 175 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 206
Score = 70 (29.7 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 49 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 108
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 109 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 136
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 320 (117.7 bits), Expect = 8.5e-28, P = 8.5e-28
Identities = 83/228 (36%), Positives = 127/228 (55%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLV--RELFRVAEEHAPSIVFIDEIDAVGTKRY 153
A+A +F+ V G++L ++GD K++ +++FR A + P+IVF+DEID++ R
Sbjct: 509 ALATSCHCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIVFLDEIDSILGSR- 567
Query: 154 DSNSGGEREIQRTMLE-LLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIE 212
S S E +Q +L LLN+LDG + RR S+ +V ++ ATNR +
Sbjct: 568 -SISKTECNVQERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPD 626
Query: 213 TLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADI 272
LD AL+RPGR+D+ I P PDEK + I + T M + DV+L+ + SGAD+
Sbjct: 627 VLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAETCFFSGADL 686
Query: 273 KAICTEAGLMALRERRMKVTN---EDFKKSKESVLYRKKEGTPEGLYL 317
+C EA L+AL+E ++ T E F KS ++V K +PE L L
Sbjct: 687 GNLCKEAALLALQENGLEATTVKQEHFLKSLKTV---KPSLSPEDLTL 731
Score = 172 (65.6 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 40/103 (38%), Positives = 60/103 (58%)
Query: 182 QNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRI 241
++R +++V + L I DV V+ +TNR + LDPAL RPGR DR++ P K ++ I
Sbjct: 310 ESRAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAI 369
Query: 242 FNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMAL 284
+ TS+M ++ V+L L GAD+ A+C EA L AL
Sbjct: 370 LQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAALHAL 412
Score = 84 (34.6 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKR 152
AVA + A L V L G+ + VR +F A E A P+++F+DE+DA+ +R
Sbjct: 243 AVAREAGAELLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDALCPRR 302
Query: 153 YDSNSGGEREIQRTMLELLNQLDG 176
++ E R + ++L LDG
Sbjct: 303 GGAHRAPE---SRAVAQVLTLLDG 323
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 200 (75.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 39/103 (37%), Positives = 62/103 (60%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V +I ATNR + LD AL+RPGR DR++ +PD + +I N+H ++ A DVN++ +
Sbjct: 295 VIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIA 354
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L+A R + VT DF+ +++ V+
Sbjct: 355 RGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYARDKVM 397
Score = 175 (66.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 33/84 (39%), Positives = 55/84 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + + F + GS+ ++ ++G G VR++F +++AP I+FIDEIDAVG R
Sbjct: 208 AIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIG 267
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
GG E ++T+ +LL ++DGF+S
Sbjct: 268 LGGGNDEREQTLNQLLVEMDGFES 291
Score = 49 (22.3 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + + F + GS+ ++ ++G G
Sbjct: 205 LARAIAGEANVPFFSISGSDFVEMFVGVG 233
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 200 (75.5 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 39/103 (37%), Positives = 62/103 (60%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V +I ATNR + LD AL+RPGR DR++ +PD + +I N+H ++ A DVN++ +
Sbjct: 295 VIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGREKIINVHIKKVPTAPDVNIRTIA 354
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L+A R + VT DF+ +++ V+
Sbjct: 355 RGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEYARDKVM 397
Score = 175 (66.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 33/84 (39%), Positives = 55/84 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + + F + GS+ ++ ++G G VR++F +++AP I+FIDEIDAVG R
Sbjct: 208 AIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHRGIG 267
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
GG E ++T+ +LL ++DGF+S
Sbjct: 268 LGGGNDEREQTLNQLLVEMDGFES 291
Score = 49 (22.3 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + + F + GS+ ++ ++G G
Sbjct: 205 LARAIAGEANVPFFSISGSDFVEMFVGVG 233
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 256 (95.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 306 EQARLDILKIHAGPITK 322
Score = 249 (92.7 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 250 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 369 KAVRKVADSKK 379
Score = 74 (31.1 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 214
Score = 70 (29.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 116
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 117 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 144
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 256 (95.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 306 EQARLDILKIHAGPITK 322
Score = 249 (92.7 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 250 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 369 KAVRKVADSKK 379
Score = 74 (31.1 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 214
Score = 70 (29.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 116
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 117 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 144
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 256 (95.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 306 EQARLDILKIHAGPITK 322
Score = 249 (92.7 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 250 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 369 KAVRKVADSKK 379
Score = 74 (31.1 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 214
Score = 70 (29.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 116
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 117 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 144
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 256 (95.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 306 EQARLDILKIHAGPITK 322
Score = 249 (92.7 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 250 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 369 KAVRKVADSKK 379
Score = 74 (31.1 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 214
Score = 70 (29.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 116
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 117 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 144
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 256 (95.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 306 EQARLDILKIHAGPITK 322
Score = 245 (91.3 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 53/131 (40%), Positives = 77/131 (58%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 250 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD+ +CTEAG+ A+R V EDF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 369 KAVRKVADSKK 379
Score = 74 (31.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 214
Score = 70 (29.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 57 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 116
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 117 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 144
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 256 (95.2 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 192 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 251
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 252 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 311
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 312 EQARLDILKIHAGPITK 328
Score = 249 (92.7 bits), Expect = 5.0e-27, Sum P(2) = 5.0e-27
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 256 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 314
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 315 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 374
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 375 KAVRKVADSKK 385
Score = 74 (31.1 bits), Expect = 5.0e-27, Sum P(2) = 5.0e-27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 189 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 220
Score = 70 (29.7 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 63 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 122
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 123 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 150
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 194 (73.4 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 318 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 377
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 378 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 432
Score = 188 (71.2 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 48/140 (34%), Positives = 78/140 (55%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 593 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 648
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L L + SGAD+ IC A +A+RE ++ E
Sbjct: 649 KSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 708
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 709 RERQTNPSAMEVEEDDPVPE 728
Score = 140 (54.3 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 528 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 587
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 588 IGDGGGAADRVINQILTEMDGMSTK 612
Score = 72 (30.4 bits), Expect = 1.2e-17, Sum P(3) = 1.2e-17
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+G R+ A + D + +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQ--- 313
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 314 -THGEVE-RRIVSQLLTLMDGLKQR 336
Score = 62 (26.9 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 61 (26.5 bits), Expect = 1.9e-27, Sum P(4) = 1.9e-27
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDG 92
AVAN+T A F + G E++ K G+G
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGEG 282
Score = 55 (24.4 bits), Expect = 6.4e-16, Sum P(3) = 6.4e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 525 LAKAIANECQANFISIKGPELLTMWFGE 552
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 203 (76.5 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 39/103 (37%), Positives = 63/103 (61%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V +I ATNR + LDPAL+RPGR DR+I +PD +++I +H ++ A +V + +
Sbjct: 296 VIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIA 355
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + E+ L+A R + VTNEDF+ +++ +L
Sbjct: 356 RGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEYARDKIL 398
Score = 169 (64.5 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 31/84 (36%), Positives = 54/84 (64%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + F + GS+ ++ ++G G VR++F +++AP ++FIDEIDAVG R
Sbjct: 209 AIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVG 268
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
GG E ++T+ +LL ++DGF++
Sbjct: 269 FGGGNDEREQTLNQLLVEMDGFEA 292
Score = 48 (22.0 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + F + GS+ ++ ++G G
Sbjct: 206 LAKAIAGEAKVPFFSISGSDFVEMFVGVG 234
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 256 (95.2 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 200 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 259
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 260 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 319
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 320 EQARLDILKIHAGPITK 336
Score = 249 (92.7 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 264 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 383 KAVRKVADSKK 393
Score = 74 (31.1 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 228
Score = 70 (29.7 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 71 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 130
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 131 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 158
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 256 (95.2 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 56/137 (40%), Positives = 83/137 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+Q FL+VV S ++ KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+
Sbjct: 200 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 259
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTL---IYLPG--DVKV-IMATN 209
+ +REIQRT++ELLNQ+DGFD+ + + + TL + PG D K+ I N
Sbjct: 260 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 319
Query: 210 RIETLDPALIRPGRIDR 226
LD I G I +
Sbjct: 320 EQARLDILKIHAGPITK 336
Score = 249 (92.7 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 53/131 (40%), Positives = 78/131 (59%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
D +Q R L E+ + + VK+IMATNR +TLDPAL+RPGR+DRKI LP+E+
Sbjct: 264 DREIQ-RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IH +T +++ + ++ D +GAD++ +CTEAG+ A+R V EDF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 298 KSKESVLYRKK 308
K+ V KK
Sbjct: 383 KAVRKVADSKK 393
Score = 74 (31.1 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+Q FL+VV S ++ KY+G+ +L
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARL 228
Score = 70 (29.7 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + + IV + G + V +DK +L+PG V L+ ++ L + D
Sbjct: 71 VGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVD 130
Query: 63 PMVTAVANQT--SATFLRVVG-SELIQK 87
P+V ++++ + ++ + G SE I++
Sbjct: 131 PLVYNMSHEDPGNVSYSEIGGLSEQIRE 158
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 193 (73.0 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
Identities = 53/152 (34%), Positives = 80/152 (52%)
Query: 35 KDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAVANQTSATFLRVVGSELIQKYL----- 89
K Q+EP V + V GV D M + F VG+++ + L
Sbjct: 215 KFQMEPNTGVTFDD----VAGVDEAKQDFMEVVEFLKKPERFT-AVGAKIPKGVLLIGPP 269
Query: 90 GDGPKL---AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 146
G G L A+A + F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEID
Sbjct: 270 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 329
Query: 147 AVGTKRYDSNSGGEREIQRTMLELLNQLDGFD 178
AVG +R GG E ++T+ +LL ++DGF+
Sbjct: 330 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFE 361
Score = 179 (68.1 bits), Expect = 5.6e-27, Sum P(2) = 5.6e-27
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V V+ ATNR + LD AL+RPGR DR++ +PD K + I +H DV+L+ +
Sbjct: 366 VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIA 425
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGT 311
M SGAD+ + EA ++A R R +++++ S + ++ EGT
Sbjct: 426 MRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIV-AGMEGT 474
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 190 (71.9 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 48/140 (34%), Positives = 79/140 (56%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 595 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L+ L + SGAD+ IC A +A+RE ++ E
Sbjct: 651 KSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 711 RERQTNPSAMEVEEDDPVPE 730
Score = 158 (60.7 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 140 (54.3 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTK 614
Score = 60 (26.2 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 190 (71.9 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 48/140 (34%), Positives = 79/140 (56%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 595 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L+ L + SGAD+ IC A +A+RE ++ E
Sbjct: 651 KSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 711 RERQTNPSAMEVEEDDPVPE 730
Score = 158 (60.7 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 140 (54.3 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTK 614
Score = 60 (26.2 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 190 (71.9 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 48/140 (34%), Positives = 79/140 (56%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 595 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L+ L + SGAD+ IC A +A+RE ++ E
Sbjct: 651 KSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 711 RERQTNPSAMEVEEDDPVPE 730
Score = 158 (60.7 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 140 (54.3 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTK 614
Score = 60 (26.2 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 190 (71.9 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 48/140 (34%), Positives = 79/140 (56%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 595 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L+ L + SGAD+ IC A +A+RE ++ E
Sbjct: 651 KSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 711 RERQTNPSAMEVEEDDPVPE 730
Score = 158 (60.7 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 140 (54.3 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTK 614
Score = 60 (26.2 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 190 (71.9 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 48/140 (34%), Positives = 79/140 (56%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 595 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L+ L + SGAD+ IC A +A+RE ++ E
Sbjct: 651 KSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 711 RERQTNPSAMEVEEDDPVPE 730
Score = 158 (60.7 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 140 (54.3 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTK 614
Score = 60 (26.2 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 190 (71.9 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 48/140 (34%), Positives = 79/140 (56%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 595 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L+ L + SGAD+ IC A +A+RE ++ E
Sbjct: 651 KSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 710
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 711 RERQTNPSAMEVEEDDPVPE 730
Score = 158 (60.7 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 140 (54.3 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTK 614
Score = 60 (26.2 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 6.3e-27, Sum P(4) = 6.3e-27
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 5.5e-16, Sum P(3) = 5.5e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 197 (74.4 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 39/101 (38%), Positives = 61/101 (60%)
Query: 204 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMA 263
VI ATNR + LDPAL+RPGR DR++ LPD + + +I +H R+ LA D++ +
Sbjct: 293 VIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARG 352
Query: 264 KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L A R + V+ +F+K+K+ ++
Sbjct: 353 TPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIM 393
Score = 172 (65.6 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + F + GS+ ++ ++G G VR++F A++ AP I+FIDEIDAVG +R
Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAG 263
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
GG E ++T+ ++L ++DGF+
Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFE 286
Score = 48 (22.0 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + F + GS+ ++ ++G G
Sbjct: 201 LAKAIAGEAKVPFFTISGSDFVEMFVGVG 229
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 194 (73.4 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 336 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 395
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 396 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 450
Score = 190 (71.9 bits), Expect = 7.1e-27, Sum P(4) = 7.1e-27
Identities = 48/140 (34%), Positives = 79/140 (56%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 611 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 666
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L+ L + SGAD+ IC A +A+RE ++ E
Sbjct: 667 KSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 726
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 727 RERQTNPSAMEVEEDDPVPE 746
Score = 158 (60.7 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 273 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 332
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 333 H--GEVE-RRIVSQLLTLMDGLKQR 354
Score = 140 (54.3 bits), Expect = 7.1e-27, Sum P(4) = 7.1e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 546 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 605
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 606 IGDGGGAADRVINQILTEMDGMSTK 630
Score = 60 (26.2 bits), Expect = 7.1e-27, Sum P(4) = 7.1e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 28 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIV 87
Query: 57 LSDDT 61
LSDDT
Sbjct: 88 LSDDT 92
Score = 55 (24.4 bits), Expect = 7.1e-27, Sum P(4) = 7.1e-27
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 273 AVANETGAFFFLINGPEIMSKLAGE 297
Score = 55 (24.4 bits), Expect = 6.0e-16, Sum P(3) = 6.0e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 543 LAKAIANECQANFISIKGPELLTMWFGE 570
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 194 (73.4 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 324 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 383
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 384 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 438
Score = 188 (71.2 bits), Expect = 8.0e-27, Sum P(4) = 8.0e-27
Identities = 48/140 (34%), Positives = 78/140 (55%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 599 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 654
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L L + SGAD+ IC A +A+RE ++ E
Sbjct: 655 KSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 714
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 715 RERQTNPSAMEVEEDDPVPE 734
Score = 142 (55.0 bits), Expect = 7.6e-25, Sum P(3) = 7.6e-25
Identities = 30/86 (34%), Positives = 51/86 (59%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F E++AP+I+FIDE+DA+ +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFP 316
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSR 180
+ E++R ++ +LL +DG R
Sbjct: 317 SPQTHGEVERRIVSQLLTLMDGLKQR 342
Score = 140 (54.3 bits), Expect = 8.0e-27, Sum P(4) = 8.0e-27
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 534 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 593
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 594 IGDGGGAADRVINQILTEMDGMSTK 618
Score = 62 (26.9 bits), Expect = 8.0e-27, Sum P(4) = 8.0e-27
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 8.0e-27, Sum P(4) = 8.0e-27
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 531 LAKAIANECQANFISIKGPELLTMWFGE 558
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 195 (73.7 bits), Expect = 8.3e-27, Sum P(2) = 8.3e-27
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 204 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMA 263
VI ATNR + LD AL+RPGR DR++ LPD + + +I +H ++ L+EDV +
Sbjct: 298 VIAATNRPDVLDSALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLSEDVKASVIARG 357
Query: 264 KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L A R R V E+F+++K+ ++
Sbjct: 358 TPGFSGADLANLVNEAALFAARGNRRVVGMEEFERAKDKIM 398
Score = 174 (66.3 bits), Expect = 8.3e-27, Sum P(2) = 8.3e-27
Identities = 32/83 (38%), Positives = 55/83 (66%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A ++ F + GS+ ++ ++G G VR++F A++ AP I+FIDEIDAVG +R
Sbjct: 209 AIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGAG 268
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
GG E ++T+ ++L ++DGF+
Sbjct: 269 LGGGHDEREQTLNQMLVEMDGFE 291
Score = 49 (22.3 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A ++ F + GS+ ++ ++G G
Sbjct: 206 LAKAIAGESKVPFFTISGSDFVEMFVGVG 234
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 192 (72.6 bits), Expect = 7.1e-17, Sum P(3) = 7.1e-17
Identities = 41/115 (35%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M L++DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 187 (70.9 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 47/126 (37%), Positives = 73/126 (57%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 595 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
K++ I + + +A+DV+L L + SGAD+ IC A +A+RE + NE
Sbjct: 651 KSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE---SIENE- 706
Query: 296 FKKSKE 301
++ +E
Sbjct: 707 IRRERE 712
Score = 158 (60.7 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 140 (54.3 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTK 614
Score = 66 (28.3 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV S+ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 7.1e-17, Sum P(3) = 7.1e-17
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 195 (73.7 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 39/103 (37%), Positives = 61/103 (59%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V VI ATNR + LDPAL+RPGR DR++ LPD + + +I +H ++ L +DV + +
Sbjct: 293 VIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDIRGREQILKVHMRKVPLGDDVKAEVIA 352
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L A R R V+ ++F +K+ ++
Sbjct: 353 RGTPGFSGADLANLVNEAALCAARTARRVVSMKEFDAAKDKIM 395
Score = 174 (66.3 bits), Expect = 8.6e-27, Sum P(2) = 8.6e-27
Identities = 37/104 (35%), Positives = 61/104 (58%)
Query: 78 RVVGSELIQKYLGDGPKL---AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE 134
R+ L+ G G L A+A + F + GS+ ++ ++G G VR++F A++
Sbjct: 185 RIPSGILLVGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKK 244
Query: 135 HAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD 178
AP I+FIDEIDAVG +R GG E ++T+ ++L ++DGF+
Sbjct: 245 AAPCIIFIDEIDAVGRQRGAGMGGGHDEREQTLNQMLVEMDGFE 288
Score = 48 (22.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + F + GS+ ++ ++G G
Sbjct: 203 LAKAIAGEAKVPFFTISGSDFVEMFVGVG 231
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 195 (73.7 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 49 KVHAVVGVLSDDTDPMVTAVAN-QTSATFLR------VVGSELIQKYL-----GDGPKL- 95
++ A GV+ DD + A Q TFL+ VG+++ + L G G L
Sbjct: 162 QMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLL 221
Query: 96 --AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRY 153
A+A + F + GSE ++ ++G G VR+LF+ A+E+AP ++FIDEIDAVG +R
Sbjct: 222 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRG 281
Query: 154 DSNSGGEREIQRTMLELLNQLDGFD 178
GG E ++T+ +LL ++DGF+
Sbjct: 282 AGIGGGNDEREQTLNQLLTEMDGFE 306
Score = 172 (65.6 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 204 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMA 263
+I ATNR + LD AL+RPGR DR++ PD ++ I +H LA +V++ +
Sbjct: 313 IIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARR 372
Query: 264 KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGTP 312
SGAD+ + EA ++ R R+ +T + + + V+ EGTP
Sbjct: 373 TPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVV-AGMEGTP 420
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 95/325 (29%), Positives = 159/325 (48%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + N +V + ++ V I ++ P V L + + + +L D
Sbjct: 103 VGEIVKPMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVD 162
Query: 63 PMVTA--VANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
P+V+ V +T+ V G + K + + +L V + L + + + Y G
Sbjct: 163 PLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLY-GP 221
Query: 121 GPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRY-DSNSGGEREI------QRTMLELLNQ 173
P + L A H FI + ++Y S RE+ + +++
Sbjct: 222 -PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 280
Query: 174 LDGFDS-RVQNRRL-SEVYSSLT--LIYLPG-----DVKVIMATNRIETLDPALIRPGRI 224
+D S R++ SEV ++ L L G ++KVIM TNRI+ LD AL+RPGRI
Sbjct: 281 IDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRI 340
Query: 225 DRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMAL 284
DRKIEFP P+ + + I IH+ +M L +++ ++ ++ SGA++KA+CTEAG+ AL
Sbjct: 341 DRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFAL 400
Query: 285 RERRMKVTNEDFKKSKESVLYRKKE 309
RERR+ VT EDF+ + V+ + E
Sbjct: 401 RERRVHVTQEDFEMAVAKVMKQDAE 425
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 95/325 (29%), Positives = 159/325 (48%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + + + N +V + ++ V I ++ P V L + + + +L D
Sbjct: 103 VGEIVKPMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVD 162
Query: 63 PMVTA--VANQTSATFLRVVGSELIQKYLGDGPKLAVANQTSATFLRVVGSELIQKYLGD 120
P+V+ V +T+ V G + K + + +L V + L + + + Y G
Sbjct: 163 PLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLY-GP 221
Query: 121 GPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRY-DSNSGGEREI------QRTMLELLNQ 173
P + L A H FI + ++Y S RE+ + +++
Sbjct: 222 -PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 280
Query: 174 LDGFDS-RVQNRRL-SEVYSSLT--LIYLPG-----DVKVIMATNRIETLDPALIRPGRI 224
+D S R++ SEV ++ L L G ++KVIM TNRI+ LD AL+RPGRI
Sbjct: 281 IDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRI 340
Query: 225 DRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMAL 284
DRKIEFP P+ + + I IH+ +M L +++ ++ ++ SGA++KA+CTEAG+ AL
Sbjct: 341 DRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFAL 400
Query: 285 RERRMKVTNEDFKKSKESVLYRKKE 309
RERR+ VT EDF+ + V+ + E
Sbjct: 401 RERRVHVTQEDFEMAVAKVMKQDAE 425
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 192 (72.6 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 41/115 (35%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M L++DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 188 (71.2 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 41/133 (30%), Positives = 78/133 (58%)
Query: 183 NRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 242
+R ++++ + + + + +V +I ATNR + +DPA++RPGR+D+ I PLPDEK++ I
Sbjct: 598 DRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAIL 657
Query: 243 NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNEDFKKSKE 301
+ + +A+DV++ L + SGAD+ IC A +A+RE ++ E +++
Sbjct: 658 KANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNP 717
Query: 302 SVL-YRKKEGTPE 313
S + + + PE
Sbjct: 718 SAMEVEEDDPVPE 730
Score = 158 (60.7 bits), Expect = 1.3e-26, Sum P(3) = 1.3e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 137 (53.3 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDG 176
G R + ++L ++DG
Sbjct: 590 IGDGGGAADRVINQILTEMDG 610
Score = 63 (27.2 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV S+ ++ + LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKSRPNRLIVDESINEDNSMVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 1.2e-26, Sum P(4) = 1.2e-26
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 5.1e-16, Sum P(3) = 5.1e-16
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 194 (73.4 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 183 (69.5 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 40/119 (33%), Positives = 72/119 (60%)
Query: 183 NRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 242
+R ++++ + + + +V +I ATNR + +DPA++RPGR+D+ I PLPDEK++ I
Sbjct: 598 DRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAIL 657
Query: 243 NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKE 301
+ + +++DV+L L + SGAD+ IC A +A+RE + NE ++ +E
Sbjct: 658 KANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE---SIENE-IRRERE 712
Score = 158 (60.7 bits), Expect = 9.4e-26, Sum P(3) = 9.4e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 143 (55.4 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 27/85 (31%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG S+
Sbjct: 590 VGDGGGAADRVINQILTEMDGMSSK 614
Score = 61 (26.5 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV S+ ++ V LS D+L+ G +VLL K V V
Sbjct: 12 LSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRRETVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 2.4e-26, Sum P(4) = 2.4e-26
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 279 (103.3 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 71/202 (35%), Positives = 112/202 (55%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D++ T+R +S
Sbjct: 533 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNS 592
Query: 156 --NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIET 213
++GG + R + +LL ++DG +++ V+ +I ATNR +
Sbjct: 593 AGDAGGAAD--RVLNQLLTEMDGMNAK------KTVF-------------IIGATNRPDI 631
Query: 214 LDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIK 273
+D AL+RPGR+D+ I PLPDE ++ IF + +A+DV++ L SGADI
Sbjct: 632 IDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADIT 691
Query: 274 AICTEAGLMALRERRMK-VTNE 294
IC A A+RE K + NE
Sbjct: 692 EICQRACKYAIRENIEKDIENE 713
Score = 203 (76.5 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 45/118 (38%), Positives = 69/118 (58%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+ V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+I+ +PDE
Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IHT M LAEDV+L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 90 GDGPKL---AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 146
G G L AVAN+T A F + G E++ K G+ +R+ F AE++APSI+FIDEID
Sbjct: 251 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 310
Query: 147 AVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSR 180
++ KR +N GE E +R + +LL +DG SR
Sbjct: 311 SIAPKREKTN--GEVE-RRIVSQLLTLMDGLKSR 341
Score = 54 (24.1 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 260 AVANETGAFFFCINGPEIMSKLAGE 284
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 201 (75.8 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 47/124 (37%), Positives = 73/124 (58%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+I+ +PDE +
Sbjct: 324 VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 383
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 300
+ IHT M LAEDV+L+ + GAD+ A+CTEA L +RE+ M V + D ++
Sbjct: 384 VLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREK-MDVIDLDDEEID 442
Query: 301 ESVL 304
+L
Sbjct: 443 AEIL 446
Score = 186 (70.5 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 42/118 (35%), Positives = 71/118 (60%)
Query: 183 NRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 242
+R L+++ + + + V +I ATNR + +DPAL+RPGR+D+ I PLPDE+++ +IF
Sbjct: 602 DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIF 661
Query: 243 NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 300
+ +A+DV+L+ L SGADI IC + A+RE K ++ K+++
Sbjct: 662 KSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAE 719
Score = 164 (62.8 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 40/94 (42%), Positives = 58/94 (61%)
Query: 90 GDGPKL---AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 146
G G L AVAN+T A F + G E++ K G+ +R+ F AE++APSI+FIDEID
Sbjct: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311
Query: 147 AVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSR 180
++ KR ++ GE E +R + +LL +DG SR
Sbjct: 312 SIAPKREKTH--GEVE-RRIVSQLLTLMDGLKSR 342
Score = 154 (59.3 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 30/87 (34%), Positives = 56/87 (64%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ T+R +S
Sbjct: 534 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNS 593
Query: 156 --NSGGEREIQRTMLELLNQLDGFDSR 180
++GG + R + +LL ++DG +++
Sbjct: 594 VGDAGGAAD--RVLNQLLTEMDGMNAK 618
Score = 55 (24.4 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 531 LAKAIANECQANFISIKGPELLTMWFGE 558
Score = 54 (24.1 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 261 AVANETGAFFFCINGPEIMSKLAGE 285
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 194 (73.4 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Score = 185 (70.2 bits), Expect = 3.4e-26, Sum P(4) = 3.4e-26
Identities = 50/142 (35%), Positives = 79/142 (55%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 595 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 236 KTKRRIF--NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVT 292
K++ I N+ S + A DV+L+ L + SGAD+ IC A +A+RE ++
Sbjct: 651 KSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIR 710
Query: 293 NEDFKKSKESVL-YRKKEGTPE 313
E +++ S + + + PE
Sbjct: 711 RERERQTNPSAMEVEEDDPVPE 732
Score = 158 (60.7 bits), Expect = 6.8e-26, Sum P(3) = 6.8e-26
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 316
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 317 H--GEVE-RRIVSQLLTLMDGLKQR 338
Score = 140 (54.3 bits), Expect = 3.4e-26, Sum P(4) = 3.4e-26
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTK 614
Score = 60 (26.2 bits), Expect = 3.4e-26, Sum P(4) = 3.4e-26
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ N IV ++ ++ V LS D+L+ G +VLL K AV V
Sbjct: 12 LSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIV 71
Query: 57 LSDDT 61
LSDDT
Sbjct: 72 LSDDT 76
Score = 55 (24.4 bits), Expect = 3.4e-26, Sum P(4) = 3.4e-26
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGE 281
Score = 55 (24.4 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 527 LAKAIANECQANFISIKGPELLTMWFGE 554
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 187 (70.9 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G D R Q L+++ + + +I ATNR + LDPAL+RPGR DR+I PD
Sbjct: 277 GHDEREQT--LNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDV 334
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + +H L E++NL+ + SGAD++ + EA L+A R+ + K+ D
Sbjct: 335 NGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSD 394
Query: 296 FKKSKESVL 304
++ + V+
Sbjct: 395 IDEATDRVI 403
Score = 177 (67.4 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 35/82 (42%), Positives = 54/82 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + F + GS+ ++ ++G G VR+LF A+++AP I+FIDEIDAVG +R
Sbjct: 214 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAG 273
Query: 156 NSGGEREIQRTMLELLNQLDGF 177
GG E ++T+ +LL ++DGF
Sbjct: 274 LGGGHDEREQTLNQLLVEMDGF 295
Score = 49 (22.3 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ AVA + F + GS+ ++ ++G G
Sbjct: 211 LARAVAGEAGVPFFSISGSDFVEMFVGVG 239
Score = 39 (18.8 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 9/14 (64%), Positives = 9/14 (64%)
Query: 170 LLNQLDGFDSRVQN 183
LLNQ G SRV N
Sbjct: 130 LLNQAQGGGSRVMN 143
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 192 (72.6 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDAVG +R
Sbjct: 272 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTG 331
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
GG E ++T+ +LL ++DGF+
Sbjct: 332 IGGGNDEREQTLNQLLTEMDGFE 354
Score = 170 (64.9 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 36/110 (32%), Positives = 61/110 (55%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V V+ ATNR + LD AL+RPGR DR++ +PD K + I +H+ V+L+ +
Sbjct: 359 VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIA 418
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKEGT 311
M SGAD+ + EA ++A R + +++++ S + ++ EGT
Sbjct: 419 MRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIV-AGMEGT 467
Score = 54 (24.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 13/77 (16%), Positives = 31/77 (40%)
Query: 16 IVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAVANQTSAT 75
+ + ++ ++ F+ K + + V +VG + A+A +
Sbjct: 222 VAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGV-LLVGPPGTGKTLLAKAIAGEAGVP 280
Query: 76 FLRVVGSELIQKYLGDG 92
F + GSE ++ ++G G
Sbjct: 281 FFSISGSEFVEMFVGVG 297
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 189 (71.6 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 204 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMA 263
VI ATNR + LDPAL+RPGR DR++ LPD + + +I +H ++ LA DV +
Sbjct: 297 VIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARG 356
Query: 264 KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L A R + V+ +F+ +K+ ++
Sbjct: 357 TPGFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKIM 397
Score = 169 (64.5 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 31/83 (37%), Positives = 54/83 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + F + GS+ ++ ++G G VR++F A++ +P I+FIDEIDAVG +R
Sbjct: 208 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAG 267
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
GG E ++T+ ++L ++DGF+
Sbjct: 268 VGGGHDEREQTLNQMLVEMDGFE 290
Score = 48 (22.0 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + F + GS+ ++ ++G G
Sbjct: 205 LAKAIAGEAKVPFFTISGSDFVEMFVGVG 233
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 189 (71.6 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 38/101 (37%), Positives = 59/101 (58%)
Query: 204 VIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMA 263
VI ATNR + LDPAL+RPGR DR++ LPD + + +I +H ++ LA DV +
Sbjct: 297 VIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARG 356
Query: 264 KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
SGAD+ + EA L A R + V+ +F+ +K+ ++
Sbjct: 357 TPGFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKIM 397
Score = 169 (64.5 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 31/83 (37%), Positives = 54/83 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + F + GS+ ++ ++G G VR++F A++ +P I+FIDEIDAVG +R
Sbjct: 208 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAG 267
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
GG E ++T+ ++L ++DGF+
Sbjct: 268 VGGGHDEREQTLNQMLVEMDGFE 290
Score = 48 (22.0 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A+A + F + GS+ ++ ++G G
Sbjct: 205 LAKAIAGEAKVPFFTISGSDFVEMFVGVG 233
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 189 (71.6 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 42/105 (40%), Positives = 60/105 (57%)
Query: 201 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQE- 259
+V V+ ATNR + LD AL+RPGR DR+I PD K++ IF +H + + L + +N E
Sbjct: 441 NVVVLAATNRPDILDKALLRPGRFDRQITIDNPDLKSREEIFRVHLAALLLDKSINYAER 500
Query: 260 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
L SGADI +C EA L+A R +T E F + + V+
Sbjct: 501 LSKLTPGFSGADIANVCNEAALIAARRHAEIITLEHFDAAVDRVI 545
Score = 169 (64.5 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 36/83 (43%), Positives = 51/83 (61%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A + + F GS+ ++ ++G GP VR+LF A ++AP IVFIDEIDAVG R
Sbjct: 354 ATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRARGKG 413
Query: 156 N-SGGEREIQRTMLELLNQLDGF 177
SG E + T+ +LL ++DGF
Sbjct: 414 GFSGSNDERENTLNQLLVEMDGF 436
Score = 48 (22.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGP 93
A A + + F GS+ ++ ++G GP
Sbjct: 354 ATAGEANVPFYSTSGSDFVEMFVGVGP 380
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 297 (109.6 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 79/224 (35%), Positives = 125/224 (55%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A +F+ V G++L ++GD K++ ++FR A + P+IVF+DEID++ R S
Sbjct: 519 ALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSR--S 576
Query: 156 NSGGEREIQ-RTMLELLNQLDGFDSRVQNRRLS---------EVYSSLTLIY---LPGDV 202
S E +Q R + LLN+LDG + RR S ++ + L + +V
Sbjct: 577 ISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNV 636
Query: 203 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIM 262
V+ ATNR + LD AL+RPGR+D+ I P PDEK + I + T + DV+L+++
Sbjct: 637 IVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAA 696
Query: 263 AKDDLSGADIKAICTEAGLMALRERRMKVTN---EDFKKSKESV 303
SGAD+ +C EA L+AL+E ++VT E F +S ++V
Sbjct: 697 ETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFLESLKTV 740
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 37/103 (35%), Positives = 60/103 (58%)
Query: 182 QNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRI 241
++R +++V + L I +V V+ +TNR + LDPAL RPGR DR++ P + ++ I
Sbjct: 320 ESRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAI 379
Query: 242 FNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMAL 284
+ TS+M ++ V+L L GAD+ A+C EA + AL
Sbjct: 380 LQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQAL 422
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 190 (71.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 38/85 (44%), Positives = 56/85 (65%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A + F V GSE ++ ++G G VR+LF+ A E+APSIVF+DEIDA+G +R
Sbjct: 425 ATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKG 484
Query: 156 NSGGEREIQRTML-ELLNQLDGFDS 179
N+ G + + T L +LL ++DGFD+
Sbjct: 485 NATGANDERETTLNQLLVEMDGFDT 509
Score = 166 (63.5 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 39/106 (36%), Positives = 58/106 (54%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQ--- 258
V V+ TNR + LD AL+RPGR DR + P+ ++ IF++H ++TL +D++
Sbjct: 513 VVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPDLSG 572
Query: 259 ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
L SGADI +C EA L+A R VT F+ + E V+
Sbjct: 573 RLAALTPGFSGADIANVCNEAALIAARYNAEFVTLRHFELAIERVI 618
Score = 48 (22.0 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A A + F V GSE ++ ++G G
Sbjct: 422 LAKATAGEAGVPFYSVSGSEFVEMFVGVG 450
>UNIPROTKB|H0YCA5 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:AC025580 HGNC:HGNC:28762
Ensembl:ENST00000531624 Uniprot:H0YCA5
Length = 258
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 68/182 (37%), Positives = 103/182 (56%)
Query: 125 VRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRVQNR 184
++++FR A P+I+F+DEID++ R S +G + + +R + LLN+LDG + R
Sbjct: 51 LKQIFRQARASTPAILFLDEIDSILGARSASKTGCDVQ-ERVLSVLLNELDGVGLKTIER 109
Query: 185 RLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNI 244
R S+ V +I ATNR + LD AL+RPGR+D+ I P PD K + I +
Sbjct: 110 RGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKV 169
Query: 245 HTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN---EDFKKSKE 301
T M + DV+L+ L SGAD++ +CTEA L+AL+E + T E F KS +
Sbjct: 170 CTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLK 229
Query: 302 SV 303
+V
Sbjct: 230 TV 231
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 291 (107.5 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 76/212 (35%), Positives = 113/212 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A+ + +F + G+EL Y+GD K + +LF A APSIVF+DE+D++ R D
Sbjct: 505 AAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDG 564
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRR-------LSEV--YSSLTLIYLP------G 200
+S + + LL +LDG R RR L E + L +
Sbjct: 565 SSSSHSVQSQVLSVLLTELDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQEVCNK 624
Query: 201 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQEL 260
DV ++ ATNR E LD AL+RPGR+D+ I P PD + + + I T + L +DV L++L
Sbjct: 625 DVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDL 684
Query: 261 IMAKDDLSGADIKAICTEAGLMALRERRMKVT 292
+ SGAD++ +C EA L+ALRE + V+
Sbjct: 685 AAQTELFSGADLENLCKEAALLALREDGLAVS 716
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 39/114 (34%), Positives = 60/114 (52%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G S +NR ++++ + + I +I ATN+ ++LDPAL RPGR DR++ +P
Sbjct: 301 GSSSAPENRLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSL 360
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRM 289
+R I M L+ DV+L L GAD+ A+ EA L A+R +M
Sbjct: 361 LQRRSILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRHSQM 414
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 263 (97.6 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 72/214 (33%), Positives = 108/214 (50%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA++ SA F+ + G EL+ + G+ VRE+F A AP ++F DE+D++GT+R S
Sbjct: 533 AVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSS 592
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLD 215
G R M +LL ++DG + +N ++ G ATNR E LD
Sbjct: 593 LGDGSGAGDRVMNQLLTEIDGVGPK-KN------------LFFIG------ATNRPELLD 633
Query: 216 PALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAI 275
AL+RPGR+D+ I PLPD + I + +AE+V + L SGAD+ +
Sbjct: 634 EALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAEL 693
Query: 276 CTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 309
C A A+R+ + E+ K + L KKE
Sbjct: 694 CQRAARAAIRDA---IDAEEMNKKSKLELSNKKE 724
Score = 212 (79.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 49/124 (39%), Positives = 70/124 (56%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+ V+ R +S++ + + I G V VI ATNR ++DPAL R GR DR+I+ +PD+
Sbjct: 320 NGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNG 379
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IHT M L+ DV L+EL GAD+ +CTEA L +RE+ + ED
Sbjct: 380 RFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEI 439
Query: 298 KSKE 301
KE
Sbjct: 440 IDKE 443
Score = 163 (62.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 37/87 (42%), Positives = 55/87 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R F AE+++P+I+FIDEID++ KR +
Sbjct: 260 AVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKT 319
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
N GE E +R + +LL +DG SR Q
Sbjct: 320 N--GEVE-RRVVSQLLTLMDGIKSRGQ 343
Score = 54 (24.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 260 AVANETGAFFFLINGPEVMSKMAGE 284
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 263 (97.6 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 72/214 (33%), Positives = 108/214 (50%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA++ SA F+ + G EL+ + G+ VRE+F A AP ++F DE+D++GT+R S
Sbjct: 533 AVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSS 592
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLD 215
G R M +LL ++DG + +N ++ G ATNR E LD
Sbjct: 593 LGDGSGAGDRVMNQLLTEIDGVGPK-KN------------LFFIG------ATNRPELLD 633
Query: 216 PALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAI 275
AL+RPGR+D+ I PLPD + I + +AE+V + L SGAD+ +
Sbjct: 634 EALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAEL 693
Query: 276 CTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 309
C A A+R+ + E+ K + L KKE
Sbjct: 694 CQRAARAAIRDA---IDAEEMNKKSKLELSNKKE 724
Score = 212 (79.7 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 49/124 (39%), Positives = 70/124 (56%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+ V+ R +S++ + + I G V VI ATNR ++DPAL R GR DR+I+ +PD+
Sbjct: 320 NGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNG 379
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I IHT M L+ DV L+EL GAD+ +CTEA L +RE+ + ED
Sbjct: 380 RFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEI 439
Query: 298 KSKE 301
KE
Sbjct: 440 IDKE 443
Score = 163 (62.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 37/87 (42%), Positives = 55/87 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R F AE+++P+I+FIDEID++ KR +
Sbjct: 260 AVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKT 319
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
N GE E +R + +LL +DG SR Q
Sbjct: 320 N--GEVE-RRVVSQLLTLMDGIKSRGQ 343
Score = 54 (24.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 260 AVANETGAFFFLINGPEVMSKMAGE 284
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 186 (70.5 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 40/104 (38%), Positives = 64/104 (61%)
Query: 182 QNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRI 241
Q+R LS + + + V VI ATNR++ +D AL+RPGR D+ +E LPD+ ++ +I
Sbjct: 691 QSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKI 750
Query: 242 FNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALR 285
I T + L+++VNL E+ + SGAD++ +C EA +LR
Sbjct: 751 LKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLR 794
Score = 166 (63.5 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR-YD 154
AVA+ + +FL + G+ + YLGD + +R++F+ A + PSI+F DEIDA+ +KR
Sbjct: 623 AVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLS 682
Query: 155 SNSGGEREIQRTMLELLNQLDGFD 178
NS G+ R + LN++DG +
Sbjct: 683 DNSSGDNAQSRVLSTFLNEMDGVE 706
Score = 137 (53.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 33/110 (30%), Positives = 65/110 (59%)
Query: 200 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDV-NLQ 258
G++ +I ATNR +D AL RPGR+DR+IE P+P+++ + I ++ S++ ++ NL
Sbjct: 428 GNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNLL 487
Query: 259 ELIMAKDDLS--GADIKAICTEAGLMALRERRM-KVTNEDFKKSKESVLY 305
+ I A + + GA+I+ +C ++ +A + + K N + +++ Y
Sbjct: 488 DQI-ADETVGYVGANIQFLCRDSAFIAFSKYNLLKYQNNEQNENENEKKY 536
Score = 79 (32.9 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 117 YLGDGPKLVRELFR------VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLEL 170
Y+G+ + +R +F+ +A+ ++P +VFIDEID + R S R + +
Sbjct: 361 YIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQNESRVVG----QF 416
Query: 171 LNQLDGFDSRVQN 183
L LDG +R N
Sbjct: 417 LTLLDGIGARKGN 429
Score = 57 (25.1 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+V AVA+ + +FL + G+ + YLGD
Sbjct: 620 LVKAVASSSKLSFLSLSGATIFSPYLGD 647
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 182 (69.1 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 38/83 (45%), Positives = 53/83 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A + F V GSE ++ ++G G VR+LF+ A E+APSIVFIDEIDA+G R
Sbjct: 400 ATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKG 459
Query: 156 N-SGGEREIQRTMLELLNQLDGF 177
N SG E + T+ ++L ++DGF
Sbjct: 460 NFSGANDERENTLNQMLVEMDGF 482
Score = 170 (64.9 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 41/111 (36%), Positives = 63/111 (56%)
Query: 197 YLPGDVKVIMA-TNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDV 255
+ P D V++A TNR + LD AL+RPGR DR I P+ + ++ IF +H + LA ++
Sbjct: 482 FTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEI 541
Query: 256 -NLQELIMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
+L+ + A SGADI +C EA L+A R V F+++ E V+
Sbjct: 542 FDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVI 592
Score = 46 (21.3 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A A + F V GSE ++ ++G G
Sbjct: 397 LAKATAGEAGVPFYFVSGSEFVEMFVGVG 425
>UNIPROTKB|Q9PUL2 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8355 "Xenopus laevis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0030496 "midbody" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AF177942
UniGene:Xl.6322 ProteinModelPortal:Q9PUL2 IntAct:Q9PUL2
Xenbase:XB-GENE-995725 Uniprot:Q9PUL2
Length = 486
Score = 282 (104.3 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 74/203 (36%), Positives = 110/203 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF + S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 258 AVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 317
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 318 E---EHEASRRVKAELLVQMDGVGGASENEDPSKM------------VMVLAATNFPWDI 362
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + LA+DVN++ + D SGADI
Sbjct: 363 DEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITN 420
Query: 275 ICTEAGLMALRERRMKVTNEDFK 297
+C +A LMA+R R +T E+ +
Sbjct: 421 VCRDASLMAMRRRIEGLTPEEIR 443
>MGI|MGI:1344353 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISO] [GO:0001578
"microtubule bundle formation" evidence=IGI] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005819 "spindle" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IPI] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0010977
"negative regulation of neuron projection development"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030424
"axon" evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=ISO]
[GO:0030496 "midbody" evidence=ISO] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0045502 "dynein binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051013 "microtubule severing" evidence=IGI;ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051329 "interphase of mitotic
cell cycle" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1344353 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 GO:GO:0030424 GO:GO:0016887
eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0045502 HAMAP:MF_03023
HOGENOM:HOG000225142 OrthoDB:EOG4CJVGZ EMBL:AF153197 EMBL:BC009136
IPI:IPI00125451 UniGene:Mm.28127 UniGene:Mm.421297 PDB:2RPA
PDBsum:2RPA ProteinModelPortal:Q9WV86 SMR:Q9WV86 STRING:Q9WV86
PhosphoSite:Q9WV86 PRIDE:Q9WV86 UCSC:uc007eii.2 InParanoid:Q9WV86
EvolutionaryTrace:Q9WV86 CleanEx:MM_KATNA1 Genevestigator:Q9WV86
GermOnline:ENSMUSG00000019794 Uniprot:Q9WV86
Length = 491
Score = 282 (104.3 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 77/210 (36%), Positives = 113/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A ++P+ +FIDEID++ ++R S
Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R M ELL Q+DG +N S++ V V+ ATN +
Sbjct: 321 E---EHEASRRMKAELLVQMDGVGGASENDDPSKM------------VMVLAATNFPWDI 365
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + LA+DVNL + + SGADI
Sbjct: 366 DEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITN 423
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R +T E+ + S+E++
Sbjct: 424 VCRDASLMAMRRRIEGLTPEEIRNLSREAM 453
>UNIPROTKB|Q0IIR9 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 CTD:11104 EMBL:BC121679
RefSeq:NP_001072433.1 UniGene:Str.53362 ProteinModelPortal:Q0IIR9
GeneID:779887 KEGG:xtr:779887 Xenbase:XB-GENE-995720 Uniprot:Q0IIR9
Length = 492
Score = 282 (104.3 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 74/203 (36%), Positives = 110/203 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF + S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 262 AVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 321
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 322 E---EHEASRRVKAELLVQMDGVGGASENEDPSKM------------VMVLAATNFPWDI 366
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + LA+DVN++ + D SGADI
Sbjct: 367 DEALRR--RLEKRIYIPLPSAKGREELLRINLKELELADDVNIECIAENMDGYSGADITN 424
Query: 275 ICTEAGLMALRERRMKVTNEDFK 297
+C +A LMA+R R +T E+ +
Sbjct: 425 VCRDASLMAMRRRIEGLTPEEIR 447
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 185 (70.2 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 44/121 (36%), Positives = 67/121 (55%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+I+ +PD +
Sbjct: 318 VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLE 377
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSK 300
I IHT M L E V+L+ + GAD+ A+CTE+ L +RE+ + ED S
Sbjct: 378 IMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETISA 437
Query: 301 E 301
E
Sbjct: 438 E 438
Score = 169 (64.5 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 41/120 (34%), Positives = 69/120 (57%)
Query: 183 NRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 242
+R ++++ + + + +V +I ATNR + +DPA++RPGR+D+ I PLPD ++ I
Sbjct: 596 DRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAIL 655
Query: 243 NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKES 302
++ +A+DV+L+ L SGAD+ IC A +A+RE K E K +ES
Sbjct: 656 KACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIEKDI-ESTKARQES 714
Score = 164 (62.8 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++APSI+FIDEID++ KR
Sbjct: 255 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR--E 312
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG SR
Sbjct: 313 KTQGEVE-RRIVSQLLTLMDGLKSR 336
Score = 143 (55.4 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 29/87 (33%), Positives = 53/87 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRELF A + AP ++F DE+D++ R S
Sbjct: 528 AIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSS 587
Query: 156 --NSGGEREIQRTMLELLNQLDGFDSR 180
++GG + R + ++L ++DG +++
Sbjct: 588 QGDAGGAGD--RVINQILTEMDGMNAK 612
Score = 55 (24.4 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 255 AVANETGAFFFLINGPEIMSKLAGE 279
Score = 55 (24.4 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 525 LAKAIANECQANFISIKGPELLTMWFGE 552
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 203 (76.5 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 45/118 (38%), Positives = 69/118 (58%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+ V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+I+ +PDE
Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ + IHT M LAEDV+L+ + GAD+ A+CTEA L +RE+ + ED
Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLED 437
Score = 179 (68.1 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 44/131 (33%), Positives = 72/131 (54%)
Query: 183 NRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 242
+R L+++ + + + V +I ATNR + +D AL+RPGR+D+ I PLPDE ++ IF
Sbjct: 602 DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIF 661
Query: 243 NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKES 302
+ +A+DV++ L SGADI IC A A+RE K ++ K+ E+
Sbjct: 662 KAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKE-KRRSEN 720
Query: 303 VLYRKKEGTPE 313
+++G E
Sbjct: 721 PEAMEEDGVDE 731
Score = 169 (64.5 bits), Expect = 5.5e-24, Sum P(2) = 5.5e-24
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 90 GDGPKL---AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 146
G G L AVAN+T A F + G E++ K G+ +R+ F AE++APSI+FIDEID
Sbjct: 251 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 310
Query: 147 AVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSR 180
++ KR +N GE E +R + +LL +DG SR
Sbjct: 311 SIAPKREKTN--GEVE-RRIVSQLLTLMDGLKSR 341
Score = 155 (59.6 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 30/86 (34%), Positives = 52/86 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ V G EL+ + G+ VRE+F A + AP ++F DE+D++ T+R
Sbjct: 533 AIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGG 592
Query: 156 NSG-GEREIQRTMLELLNQLDGFDSR 180
+ G G R + +LL ++DG +++
Sbjct: 593 SGGDGGGAADRVLNQLLTEMDGMNAK 618
Score = 56 (24.8 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ V G EL+ + G+
Sbjct: 530 LAKAIANECQANFISVKGPELLTMWFGE 557
Score = 54 (24.1 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 260 AVANETGAFFFCINGPEIMSKLAGE 284
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 176 (67.0 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 37/85 (43%), Positives = 53/85 (62%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A + + FL V GSE ++ ++G GP VR+LF A ++AP I+FIDEIDA+G R
Sbjct: 348 ATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRG 407
Query: 156 NS-GGEREIQRTMLELLNQLDGFDS 179
G E + T+ +LL ++DGF S
Sbjct: 408 GQFGSNDERESTLNQLLVEMDGFTS 432
Score = 173 (66.0 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 37/104 (35%), Positives = 58/104 (55%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNL--QE 259
+ V TNR + LDPAL+RPGR DR+I PD + +IF +H + A++++L +
Sbjct: 436 IVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKR 495
Query: 260 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESV 303
L + +GADI +C E L+A R +V F+++ E V
Sbjct: 496 LAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERV 539
Score = 60 (26.2 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGP 93
+ A A + + FL V GSE ++ ++G GP
Sbjct: 345 LAKATAGEANVPFLSVSGSEFLEMFVGVGP 374
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 179 (68.1 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 34/85 (40%), Positives = 55/85 (64%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + F + GS+ ++ ++G G VR+LF A++++P I+F+DEIDAVG +R
Sbjct: 215 AVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAG 274
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
GG E ++T+ +LL ++DGF R
Sbjct: 275 LGGGHDEREQTLNQLLVEMDGFGDR 299
Score = 169 (64.5 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 36/103 (34%), Positives = 57/103 (55%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V +I ATNR + LDPAL+RPGR DR+I PD +R + +H+ +A D +L L
Sbjct: 302 VILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLA 361
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
++GAD+ + EA L+ RE +T +++ + V+
Sbjct: 362 KRTVGMTGADLANVINEAALLTARENGTVITGPALEEAVDRVI 404
Score = 49 (22.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ AVA + F + GS+ ++ ++G G
Sbjct: 212 LARAVAGEAGVPFFTISGSDFVEMFVGVG 240
>UNIPROTKB|F1S7T6 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
GO:GO:0008104 GO:GO:0005811 GO:GO:0030424 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0031122 GeneTree:ENSGT00550000074466
GO:GO:0051329 EMBL:CU915504 Ensembl:ENSSSCT00000004539 OMA:YHGESER
Uniprot:F1S7T6
Length = 263
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 76/210 (36%), Positives = 112/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A ++P+ +FIDEID++ ++R S
Sbjct: 33 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 92
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 93 E---EHEASRRVKAELLVQMDGVGGASENDDPSKM------------VMVLAATNFPWDI 137
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + LA+DV+L + + SGADI
Sbjct: 138 DEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITN 195
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R +T E+ + SKE +
Sbjct: 196 VCRDASLMAMRRRIEGLTPEEIRNLSKEEM 225
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 175 (66.7 bits), Expect = 6.0e-24, Sum P(2) = 6.0e-24
Identities = 42/108 (38%), Positives = 58/108 (53%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V VI ATN+IE +DPAL+R GR DR+I LPD K + +I I+ ++NL ++
Sbjct: 288 VIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILEIYMKDKN--NNINLNKIA 345
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKKE 309
A SGA ++ + EA + ALR V DF VL KK+
Sbjct: 346 KASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKVLLGKKK 393
Score = 168 (64.2 bits), Expect = 6.0e-24, Sum P(2) = 6.0e-24
Identities = 41/83 (49%), Positives = 52/83 (62%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + F GS ++ Y+G G K VRELF A+ APSIVFIDEIDAVG R +
Sbjct: 204 AVAGEAGVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEM 263
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
S ER+ T+ +LL Q+DGF+
Sbjct: 264 -SNVERD--STLNQLLTQMDGFE 283
Score = 46 (21.3 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPK 94
AVA + F GS ++ Y+G G K
Sbjct: 204 AVAGEAGVPFFYQSGSSFVEIYVGMGAK 231
Score = 44 (20.5 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 24/106 (22%), Positives = 44/106 (41%)
Query: 175 DGFDSRVQN-RRLSEVYSSLTLIYLPGD--VKVIMATNRIETLDPALIRPGRIDRKIEFP 231
D F N R SE+ + + +YL G +K+I + + D L +D + F
Sbjct: 431 DRFKEYEHNIRSKSELINRIK-VYLAGSRAMKLIYNESYTNSQDDFLKIKELLDYMLSFD 489
Query: 232 LPDEKTKRRIFNIHTSRMTLAED--VNLQELIMAKDDLSGADIKAI 275
+ +E + +D + L EL++ K+ + D+K I
Sbjct: 490 MLEESNLSEQKKEMDEFLNSMKDKILKLSELLLEKEKIEYDDVKDI 535
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 182 (69.1 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 36/82 (43%), Positives = 53/82 (64%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A ++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEIDA+G R
Sbjct: 374 ATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRG 433
Query: 156 NSGGEREIQRTMLELLNQLDGF 177
GG E + T+ +LL ++DGF
Sbjct: 434 GLGGNDERESTLNQLLVEMDGF 455
Score = 165 (63.1 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 39/105 (37%), Positives = 57/105 (54%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNL--QE 259
V V+ TNR + LD AL+RPGR DR+I PD K + +IF I+ ++ L + + Q
Sbjct: 461 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQR 520
Query: 260 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
L +GADI +C EA L+A R VT F+ + + V+
Sbjct: 521 LAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVI 565
Score = 55 (24.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGP 93
+ A A ++ FL + GS+ ++ ++G GP
Sbjct: 371 LAKATAGESGVPFLSISGSDFMEMFVGVGP 400
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 195 (73.7 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 44/127 (34%), Positives = 72/127 (56%)
Query: 179 SRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 238
S V R LS + + + + + V+ ATNR +D AL+RPGR D + P PD + +
Sbjct: 404 STVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEAR 463
Query: 239 RRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER--RMKVTNEDF 296
I +HT MTL +DV+L+++ D +GA+++ +C E+G ++LRE V N F
Sbjct: 464 FEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAATAVFNRHF 523
Query: 297 KKSKESV 303
+ +K S+
Sbjct: 524 QTAKSSL 530
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 56/210 (26%), Positives = 104/210 (49%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AV + A + + + + + G+ K++RE F A HA S D+ + D
Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVS----DKPSVIFIDEIDV 130
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLD 215
R+ +R D R+ ++ + + S+ P V V+ +TNR++ +D
Sbjct: 131 LCP-RRDARREQ----------DVRIASQLFTLMDSNKPSSSAPR-VVVVASTNRVDAID 178
Query: 216 PALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAI 275
PAL R GR D +E P+E+ + +I ++T ++ L V+LQ + ++ + GAD++A+
Sbjct: 179 PALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEAL 238
Query: 276 CTEAGLMALRERR--MKVTNEDFKKSKESV 303
C EA + A + + +T++DFK +K V
Sbjct: 239 CREATISASKRSSDSLILTSQDFKIAKSVV 268
Score = 145 (56.1 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A AN A+F + +EL Y+G+G L+R F+ A +PSI+F DE D V KR D
Sbjct: 339 AAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDE 398
Query: 156 NSGGEREI-QRTMLELLNQLDGFD 178
+S + +R + LL ++DG +
Sbjct: 399 SSSNSSTVGERLLSTLLTEMDGLE 422
Score = 53 (23.7 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ A AN A+F + +EL Y+G+G L
Sbjct: 336 LAKAAANAAQASFFSLSCAELFSMYVGEGEAL 367
>UNIPROTKB|E2R3K3 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001578 "microtubule bundle
formation" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051329 "interphase of
mitotic cell cycle" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0001764 GO:GO:0008104 GO:GO:0005811
GO:GO:0030424 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0031122
KO:K07767 GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK
GO:GO:0051329 EMBL:AAEX03000265 RefSeq:XP_533445.1
ProteinModelPortal:E2R3K3 Ensembl:ENSCAFT00000000603 GeneID:476240
KEGG:cfa:476240 Uniprot:E2R3K3
Length = 491
Score = 277 (102.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 76/210 (36%), Positives = 112/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A ++P+ +FIDEID++ ++R S
Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 321 E---EHEASRRVKAELLVQMDGVGGASENDDPSKM------------VMVLAATNFPWDI 365
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + LA+DVNL + + SGADI
Sbjct: 366 DEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITN 423
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R +T E+ + S+E +
Sbjct: 424 VCRDASLMAMRRRIEGLTPEEIRNLSREEM 453
>RGD|1303062 [details] [associations]
symbol:Katna1 "katanin p60 (ATPase-containing) subunit A1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=ISO;ISS] [GO:0001578 "microtubule bundle formation"
evidence=IEA;ISO] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005811 "lipid particle" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005819 "spindle"
evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0007067 "mitosis"
evidence=TAS] [GO:0008017 "microtubule binding" evidence=IEA;ISO]
[GO:0008104 "protein localization" evidence=ISO;TAS] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISO;TAS] [GO:0030424 "axon"
evidence=ISO;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO;ISS] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA;ISO] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing"
evidence=ISO;IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0051329 "interphase of mitotic cell cycle" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1303062
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 GO:GO:0043025 GO:GO:0016887
GO:GO:0030426 eggNOG:COG0464 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0010977
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 BRENDA:3.6.4.3 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AY621629 EMBL:BC097929
IPI:IPI00363811 RefSeq:NP_001004217.2 UniGene:Rn.47464
ProteinModelPortal:Q6E0V2 STRING:Q6E0V2 PRIDE:Q6E0V2
Ensembl:ENSRNOT00000020417 GeneID:292464 KEGG:rno:292464
UCSC:RGD:1303062 InParanoid:Q6E0V2 NextBio:634169
Genevestigator:Q6E0V2 GermOnline:ENSRNOG00000014996 Uniprot:Q6E0V2
Length = 491
Score = 277 (102.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 76/210 (36%), Positives = 112/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A ++P+ +FIDEID++ ++R S
Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 321 E---EHEASRRVKAELLVQMDGVGGASENDDPSKM------------VMVLAATNFPWDI 365
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + LA+DVNL + + SGADI
Sbjct: 366 DEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITN 423
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R +T E+ + S+E +
Sbjct: 424 VCRDASLMAMRRRIEGLTPEEIRNLSREEM 453
>UNIPROTKB|Q1HGK7 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9031 "Gallus gallus" [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051013 "microtubule severing"
evidence=IEA] [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0000922 "spindle pole" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005819 "spindle" evidence=ISS]
[GO:0030496 "midbody" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0008104 GO:GO:0051301 GO:GO:0007067
GO:GO:0005811 GO:GO:0030424 eggNOG:COG0464 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0005874 GO:GO:0031122 HOVERGEN:HBG057074
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 EMBL:DQ486889 IPI:IPI00786289
RefSeq:NP_001038113.1 UniGene:Gga.12204 ProteinModelPortal:Q1HGK7
Ensembl:ENSGALT00000020211 GeneID:421626 KEGG:gga:421626 CTD:11104
InParanoid:Q1HGK7 OMA:SQYSDPK OrthoDB:EOG4CJVGZ NextBio:20824364
GO:GO:0051329 Uniprot:Q1HGK7
Length = 492
Score = 277 (102.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 74/203 (36%), Positives = 109/203 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 262 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 321
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 322 E---EHEASRRVKAELLVQMDGVGGATENDDPSKM------------VMVLAATNFPWDI 366
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + LA+DV+L + + SGADI
Sbjct: 367 DEALRR--RLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITN 424
Query: 275 ICTEAGLMALRERRMKVTNEDFK 297
+C +A LMA+R R +T E+ +
Sbjct: 425 VCRDASLMAMRRRIEGLTPEEIR 447
>UNIPROTKB|E1BSZ5 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:AADN02005228
IPI:IPI00589186 RefSeq:XP_417114.1 UniGene:Gga.16694
ProteinModelPortal:E1BSZ5 PRIDE:E1BSZ5 Ensembl:ENSGALT00000027595
GeneID:418920 KEGG:gga:418920 NextBio:20822044 Uniprot:E1BSZ5
Length = 489
Score = 276 (102.2 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 76/210 (36%), Positives = 115/210 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 259 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPATIFIDEIDSICSRRGTS 318
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 319 D---EHEASRRVKSELLVQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 363
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + L D++L+E+ + SGADI
Sbjct: 364 DEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDISLEEIAEKIEGYSGADITN 421
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R +T E+ + SKE +
Sbjct: 422 VCRDASLMAMRRRINGLTPEEIRALSKEEL 451
>UNIPROTKB|O61577 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:7668 "Strongylocentrotus purpuratus" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AF052191 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568
GO:GO:0000922 GO:GO:0005874 KO:K07767 HAMAP:MF_03023 CTD:11104
RefSeq:NP_999733.1 UniGene:Spu.26881 ProteinModelPortal:O61577
STRING:O61577 GeneID:373368 KEGG:spu:373368 InParanoid:O61577
Uniprot:O61577
Length = 516
Score = 276 (102.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 73/203 (35%), Positives = 110/203 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V + L KY G+ KLVR LF +A +APS +FIDEID++ +KR
Sbjct: 286 AVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKR--- 342
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+G E E R + ELL Q+DG V E S + V V+ ATN +
Sbjct: 343 GTGSEHEASRRVKSELLIQMDG----VSGPSAGEESSKM--------VMVLAATNFPWDI 390
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP+ + ++ I+ + LA+D++L+ + D SGADI
Sbjct: 391 DEALRR--RLEKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITN 448
Query: 275 ICTEAGLMALRERRMKVTNEDFK 297
+C +A +MA+R R + E+ +
Sbjct: 449 VCRDASMMAMRRRIQGLRPEEIR 471
>UNIPROTKB|O75449 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0010977 "negative regulation of
neuron projection development" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0031122
"cytoplasmic microtubule organization" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IDA]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0051329
"interphase of mitotic cell cycle" evidence=IMP] [GO:0000922
"spindle pole" evidence=IDA] [GO:0030496 "midbody" evidence=IDA]
[GO:0005819 "spindle" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
Pathway_Interaction_DB:lis1pathway GO:GO:0008104 GO:GO:0051301
GO:GO:0007067 GO:GO:0005811 EMBL:CH471051 GO:GO:0030424
GO:GO:0043025 GO:GO:0030426 eggNOG:COG0464 GO:GO:0008017
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0005874 GO:GO:0031122
HOVERGEN:HBG057074 GO:GO:0010977 EMBL:AL078581 KO:K07767
HAMAP:MF_03023 HOGENOM:HOG000225142 CTD:11104 OMA:SQYSDPK
OrthoDB:EOG4CJVGZ GO:GO:0051329 EMBL:AF056022 EMBL:BX276089
EMBL:BC050428 IPI:IPI00013075 IPI:IPI00384339 RefSeq:NP_001191005.1
RefSeq:NP_008975.1 UniGene:Hs.450175 ProteinModelPortal:O75449
SMR:O75449 STRING:O75449 PhosphoSite:O75449 PaxDb:O75449
PRIDE:O75449 Ensembl:ENST00000335643 Ensembl:ENST00000335647
Ensembl:ENST00000367411 GeneID:11104 KEGG:hsa:11104 UCSC:uc003qmr.2
UCSC:uc003qmt.3 GeneCards:GC06M149957 HGNC:HGNC:6216 HPA:HPA036207
MIM:606696 neXtProt:NX_O75449 PharmGKB:PA30017 InParanoid:O75449
ChiTaRS:KATNA1 GenomeRNAi:11104 NextBio:42220 ArrayExpress:O75449
Bgee:O75449 CleanEx:HS_KATNA1 Genevestigator:O75449 Uniprot:O75449
Length = 491
Score = 275 (101.9 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 76/210 (36%), Positives = 112/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A ++P+ +FIDEID++ ++R S
Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 321 E---EHEASRRVKAELLVQMDGVGGTSENDDPSKM------------VMVLAATNFPWDI 365
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + LA+DV+L + + SGADI
Sbjct: 366 DEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITN 423
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R +T E+ + SKE +
Sbjct: 424 VCRDASLMAMRRRIEGLTPEEIRNLSKEEM 453
>UNIPROTKB|Q4R407 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:9541 "Macaca fascicularis" [GO:0000922 "spindle pole"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819
"spindle" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815 HSSP:Q01853
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:AB179108
ProteinModelPortal:Q4R407 Uniprot:Q4R407
Length = 491
Score = 275 (101.9 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 76/210 (36%), Positives = 112/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A ++P+ +FIDEID++ ++R S
Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 321 E---EHEASRRVKAELLVQMDGVGGASENDDPSKM------------VMVLAATNFPWDI 365
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + LA+DV+L + + SGADI
Sbjct: 366 DEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITN 423
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R +T E+ + SKE +
Sbjct: 424 VCRDASLMAMRRRIEGLTPEEIRNLSKEEM 453
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 175 (66.7 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 40/106 (37%), Positives = 59/106 (55%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V +R +S++ L ++ V VI ATNR + +D AL+RPGR DR + P+E +
Sbjct: 842 VSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREA 901
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRE 286
I IH ++ + D+ L+EL +GADI IC EA + AL E
Sbjct: 902 ILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEE 947
Score = 171 (65.3 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 51/168 (30%), Positives = 82/168 (48%)
Query: 13 NHAI-VSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAVANQ 71
+H + +++ + +V L F + + + GC + + +L D D +++ N
Sbjct: 354 HHTLDLASEIQGRTFVQGLQFDEGENV--GCEISKLGGLSKEYAILRDIIDS--SSIKNS 409
Query: 72 TSATFLRVVGSELIQKYLGDGP-KLA--VANQTSATFLRVVGSELIQKYLGDGPKLVREL 128
S+ LR LI G G LA A + F V G E+I +YLG+ K + E+
Sbjct: 410 LSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEV 469
Query: 129 FRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDG 176
FR A P++VFID++DA+ R + GGE QR + LLN +DG
Sbjct: 470 FRSASNATPAVVFIDDLDAIAPARKE---GGEELSQRMVATLLNLMDG 514
Score = 166 (63.5 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 38/86 (44%), Positives = 50/86 (58%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA++ FL V G EL K++G+ K VR LF A +APSI+F DEID++ + R
Sbjct: 777 AVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKE 836
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRV 181
N G R M +LL +LDG RV
Sbjct: 837 NDGVSVS-DRVMSQLLVELDGLHQRV 861
Score = 156 (60.0 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLA-EDVNLQEL 260
V VI ATNR ++++PAL RPGR+DR+IE +P + I +I M + ++ +++L
Sbjct: 521 VVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQL 580
Query: 261 IMAKDDLSGADIKAICTEAGLMALR 285
MA GAD+ A+C EA + LR
Sbjct: 581 AMATHGFVGADLSALCCEAAFVCLR 605
Score = 63 (27.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPK 94
M AVA++ FL V G EL K++G+ K
Sbjct: 774 MARAVASEAKLNFLAVKGPELFSKWVGESEK 804
Score = 41 (19.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 256 NLQELI-MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESV 303
+L E + + DD+ C+E L E + V EDF+ +K +
Sbjct: 660 SLDETVSLVADDIQNNGNS--CSEQMLRKQGEHTLSVGFEDFENAKTKI 706
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 279 (103.3 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 66/206 (32%), Positives = 110/206 (53%)
Query: 97 VANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSN 156
+A + TF+ +E+ Y+G + + +F A ++AP ++F+DEID++ +R S+
Sbjct: 523 LAKEADMTFIATSAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSS 582
Query: 157 SGGEREIQ-RTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLD 215
GG ++Q R + LL +++G + + V+ ATNR + +D
Sbjct: 583 GGGGGQVQLRILSTLLTEMNGIVGGGSQQH----------------ILVVAATNRPDMID 626
Query: 216 PALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAI 275
AL+RPGR D+ I P PDEK++ + +H+ RM E+V LQE+ D SGAD+ +
Sbjct: 627 DALLRPGRFDKLIHVPAPDEKSRLALLKLHSQRMPFHENVFLQEIAARTDRYSGADLCNL 686
Query: 276 CTEAGLMALRERRMKVTN---EDFKK 298
C EA + A +R K T +DF+K
Sbjct: 687 CNEAAIEAF-QRDFKATEIELQDFEK 711
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 179 (68.1 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 37/83 (44%), Positives = 55/83 (66%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A +++ FL + GS+ ++ ++G GP VR LF+ A + APSI+FIDEIDA+G R
Sbjct: 379 ATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRG 438
Query: 156 N-SGGEREIQRTMLELLNQLDGF 177
SGG E + T+ +LL ++DGF
Sbjct: 439 GFSGGNDERESTLNQLLVEMDGF 461
Score = 163 (62.4 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 39/105 (37%), Positives = 56/105 (53%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNL--QE 259
V V+ TNR + LD AL+RPGR DR+I PD K + +IF I+ ++ L + + Q
Sbjct: 467 VVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQR 526
Query: 260 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
L +GADI +C EA L+A R VT F + + V+
Sbjct: 527 LAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVI 571
Score = 56 (24.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGP 93
+ A A +++ FL + GS+ ++ ++G GP
Sbjct: 376 LAKATAGESAVPFLSISGSDFMEMFVGVGP 405
>UNIPROTKB|E1BH39 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051329 "interphase of mitotic cell cycle"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031122 "cytoplasmic
microtubule organization" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001578 "microtubule bundle formation" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005813
GO:GO:0001764 GO:GO:0008104 GO:GO:0005811 GO:GO:0030424
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0000922 GO:GO:0031122 KO:K07767
GeneTree:ENSGT00550000074466 CTD:11104 OMA:SQYSDPK GO:GO:0051329
EMBL:DAAA02027051 IPI:IPI00706925 RefSeq:NP_001179032.1
UniGene:Bt.41985 ProteinModelPortal:E1BH39
Ensembl:ENSBTAT00000001172 GeneID:506715 KEGG:bta:506715
NextBio:20867726 Uniprot:E1BH39
Length = 491
Score = 272 (100.8 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 75/210 (35%), Positives = 112/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A ++P+ +FIDEID++ ++R S
Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG +N S++ V V+ ATN +
Sbjct: 321 E---EHEASRRVKAELLVQMDGVGGASENDDPSKM------------VMVLAATNFPWDI 365
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + LA+DV+L + + SGADI
Sbjct: 366 DEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITN 423
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R +T E+ + S+E +
Sbjct: 424 VCRDASLMAMRRRIEGLTPEEIRNLSREEM 453
>MGI|MGI:2387638 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2387638 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 OMA:GVMQQIQ EMBL:BC030434 IPI:IPI00114980
RefSeq:NP_705800.1 UniGene:Mm.397405 ProteinModelPortal:Q8K0T4
SMR:Q8K0T4 PhosphoSite:Q8K0T4 PaxDb:Q8K0T4 PRIDE:Q8K0T4
Ensembl:ENSMUST00000047257 GeneID:231912 KEGG:mmu:231912
UCSC:uc009aow.2 GeneTree:ENSGT00550000074466 InParanoid:Q8K0T4
NextBio:380863 Bgee:Q8K0T4 CleanEx:MM_KATNAL1 Genevestigator:Q8K0T4
GermOnline:ENSMUSG00000041298 Uniprot:Q8K0T4
Length = 488
Score = 270 (100.1 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 76/210 (36%), Positives = 114/210 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 258 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 317
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 318 D---EHEASRRVKSELLIQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 362
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + L DV+L+++ + SGADI
Sbjct: 363 DEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITN 420
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
IC +A LMA+R R ++ E+ + SKE +
Sbjct: 421 ICRDASLMAMRRRINGLSPEEIRALSKEEL 450
>RGD|1359252 [details] [associations]
symbol:Katnal1 "katanin p60 subunit A-like 1" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA;ISO] [GO:0007283 "spermatogenesis" evidence=ISO]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA;ISO] [GO:0051013 "microtubule severing" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:1359252
GO:GO:0005524 GO:GO:0005737 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005874 HOVERGEN:HBG057074
CTD:84056 KO:K07767 OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024
HOGENOM:HOG000225142 GeneTree:ENSGT00550000074466 EMBL:BC083673
IPI:IPI00370842 RefSeq:NP_001006957.1 RefSeq:XP_003751164.1
RefSeq:XP_003752600.1 UniGene:Rn.208215 ProteinModelPortal:Q5XIK7
PRIDE:Q5XIK7 Ensembl:ENSRNOT00000001219 GeneID:100910196
GeneID:288449 KEGG:rno:100910196 KEGG:rno:288449 UCSC:RGD:1359252
InParanoid:Q5XIK7 NextBio:628096 Genevestigator:Q5XIK7
GermOnline:ENSRNOG00000000916 Uniprot:Q5XIK7
Length = 488
Score = 270 (100.1 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 75/210 (35%), Positives = 114/210 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 258 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 317
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 318 D---EHEASRRVKSELLIQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 362
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I + L D++L+++ + SGADI
Sbjct: 363 DEALRR--RLEKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITN 420
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
IC +A LMA+R R ++ E+ + SKE +
Sbjct: 421 ICRDASLMAMRRRINGLSPEEIRALSKEEL 450
>UNIPROTKB|B5X3X5 [details] [associations]
symbol:katna1 "Katanin p60 ATPase-containing subunit A1"
species:8030 "Salmo salar" [GO:0000922 "spindle pole" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 GO:GO:0005815
GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922
GO:GO:0005874 HOVERGEN:HBG057074 HAMAP:MF_03023 EMBL:BT045744
RefSeq:NP_001133845.1 UniGene:Ssa.26227 ProteinModelPortal:B5X3X5
GeneID:100195344 CTD:100195344 Uniprot:B5X3X5
Length = 486
Score = 269 (99.8 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 73/211 (34%), Positives = 111/211 (52%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 256 AVATECRTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPTTIFIDEIDSMCSRRGTS 315
Query: 156 NSGGEREIQRTM-LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
E E R + ELL Q+DG N S++ V V+ ATN +
Sbjct: 316 E---EHEASRRVKAELLVQMDGVGGASDNEDPSKM------------VMVLAATNFPWDI 360
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + LA DV++ ++ + SGADI
Sbjct: 361 DEALRR--RLEKRIYIPLPSAKGRVELLRINLKELELANDVDMAKIAEQSEGYSGADITN 418
Query: 275 ICTEAGLMALRERRMKVTNEDFKKSKESVLY 305
+C +A LMA+R R +T E+ + + ++
Sbjct: 419 VCRDASLMAMRRRIEGLTPEEIRNISRAEMH 449
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 173 (66.0 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDAVG +R
Sbjct: 314 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAG 373
Query: 156 NSGGEREIQRTMLELLNQLDGF 177
GG E ++T+ +LL ++DGF
Sbjct: 374 MGGGNDEREQTINQLLTEMDGF 395
Score = 163 (62.4 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 31/103 (30%), Positives = 58/103 (56%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V V+ ATNR + LD AL+RPGR DR++ PD + +I +H+ L +DV+ ++
Sbjct: 401 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVA 460
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
+GAD++ + EA ++A R +++ ++ + E ++
Sbjct: 461 RRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERII 503
Score = 43 (20.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ AVA + F SE ++ ++G G
Sbjct: 311 LARAVAGEAGVPFFSCAASEFVELFVGVG 339
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 188 (71.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 37/110 (33%), Positives = 67/110 (60%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+ V+ R +S++ + + + +V V+ ATNR ++DPAL R GR DR+++ +PD
Sbjct: 337 NGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTG 396
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER 287
+ I IHT M LA+DV+L+++ G+D+ ++C+EA + +RE+
Sbjct: 397 RLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREK 446
Score = 176 (67.0 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 42/125 (33%), Positives = 71/125 (56%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
DS +R ++++ + + + +V VI ATNR + +DPAL+RPGR+D+ I PLPDE+
Sbjct: 612 DSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEA 671
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK 297
+ I +AEDV+L+ + A SGAD++ + A +A+++ ED K
Sbjct: 672 RFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDS----IEEDIK 727
Query: 298 KSKES 302
+ E+
Sbjct: 728 RENET 732
Score = 161 (61.7 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 35/85 (41%), Positives = 55/85 (64%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE+++P+I+FIDEID++ KR +
Sbjct: 277 AVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT 336
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
N GE E +R + +LL +DG +R
Sbjct: 337 N--GEVE-RRVVSQLLTLMDGMKAR 358
Score = 148 (57.2 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 33/87 (37%), Positives = 53/87 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ SA F+ V G EL+ + G+ VR++F A AP +VF+DE+D++ R S
Sbjct: 550 AIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGAS 609
Query: 156 --NSGGEREIQRTMLELLNQLDGFDSR 180
+SGG R + +LL ++DG +S+
Sbjct: 610 AGDSGGG---DRVVNQLLTEMDGVNSK 633
Score = 61 (26.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ SA F+ V G EL+ + G+
Sbjct: 547 LAKAIANECSANFISVKGPELLSMWFGE 574
Score = 59 (25.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
M AVAN+T A F + G E++ K G+
Sbjct: 274 MARAVANETGAFFFLINGPEIMSKMAGE 301
>UNIPROTKB|E1BHF2 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:DAAA02033094
IPI:IPI00710392 RefSeq:NP_001179847.1 UniGene:Bt.104141
ProteinModelPortal:E1BHF2 PRIDE:E1BHF2 Ensembl:ENSBTAT00000012297
GeneID:537739 KEGG:bta:537739 NextBio:20877204 Uniprot:E1BHF2
Length = 490
Score = 268 (99.4 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 74/210 (35%), Positives = 114/210 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 260 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 319
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 320 D---EHEASRRVKSELLIQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 364
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + L D+ L+++ + SGADI
Sbjct: 365 DEALRR--RLEKRIYIPLPTAKGRTELLKINLREVELDPDIQLEDIAEKIEGYSGADITN 422
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R ++ E+ + SKE +
Sbjct: 423 VCRDASLMAMRRRINGLSPEEIRALSKEEL 452
>UNIPROTKB|Q9BW62 [details] [associations]
symbol:KATNAL1 "Katanin p60 ATPase-containing subunit
A-like 1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:CH471075
eggNOG:COG0464 GO:GO:0008568 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005874 HOVERGEN:HBG057074 CTD:84056 KO:K07767
OrthoDB:EOG4F7NJX HAMAP:MF_03023 HAMAP:MF_03024 EMBL:AK291439
EMBL:AL356750 EMBL:BC000612 IPI:IPI00789455 RefSeq:NP_001014402.1
RefSeq:NP_115492.1 UniGene:Hs.243596 ProteinModelPortal:Q9BW62
SMR:Q9BW62 IntAct:Q9BW62 MINT:MINT-1463957 STRING:Q9BW62
PhosphoSite:Q9BW62 DMDM:60390214 PaxDb:Q9BW62 PRIDE:Q9BW62
DNASU:84056 Ensembl:ENST00000380615 Ensembl:ENST00000380617
GeneID:84056 KEGG:hsa:84056 UCSC:uc001uss.3 GeneCards:GC13M030776
HGNC:HGNC:28361 HPA:HPA046205 MIM:614764 neXtProt:NX_Q9BW62
PharmGKB:PA134951885 HOGENOM:HOG000225142 InParanoid:Q9BW62
OMA:GVMQQIQ GenomeRNAi:84056 NextBio:73193 ArrayExpress:Q9BW62
Bgee:Q9BW62 CleanEx:HS_KATNAL1 Genevestigator:Q9BW62
GermOnline:ENSG00000102781 Uniprot:Q9BW62
Length = 490
Score = 268 (99.4 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 74/210 (35%), Positives = 114/210 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 260 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 319
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 320 D---EHEASRRVKSELLIQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 364
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + L D+ L+++ + SGADI
Sbjct: 365 DEALRR--RLEKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITN 422
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R ++ E+ + SKE +
Sbjct: 423 VCRDASLMAMRRRINGLSPEEIRALSKEEL 452
>UNIPROTKB|F1RST8 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 KO:K07767 OMA:GVMQQIQ
GeneTree:ENSGT00550000074466 EMBL:CU210871 RefSeq:XP_001928701.1
UniGene:Ssc.44020 ProteinModelPortal:F1RST8
Ensembl:ENSSSCT00000010220 GeneID:100156612 KEGG:ssc:100156612
Uniprot:F1RST8
Length = 490
Score = 268 (99.4 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 74/210 (35%), Positives = 114/210 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 260 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 319
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 320 D---EHEASRRVKSELLIQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 364
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + L D+ L+++ + SGADI
Sbjct: 365 DEALRR--RLEKRIYIPLPTAKGRTELLKINLREVELDPDIQLEDIAEKIEGYSGADITN 422
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R ++ E+ + SKE +
Sbjct: 423 VCRDASLMAMRRRINGLSPEEIRALSKEEL 452
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 214 (80.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 38/64 (59%), Positives = 53/64 (82%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA+ T TF+RV GSEL+QK++G+G ++VRELF +A EHAPSI+F+DEID++G+ R +
Sbjct: 194 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 253
Query: 156 NSGG 159
SGG
Sbjct: 254 GSGG 257
Score = 93 (37.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDGPKL 95
+ AVA+ T TF+RV GSEL+QK++G+G ++
Sbjct: 191 LARAVAHHTDCTFIRVSGSELVQKFIGEGARM 222
Score = 63 (27.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 14/64 (21%), Positives = 29/64 (45%)
Query: 3 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 62
VG + +D +V + V + +D + + P C V L + + + +L + D
Sbjct: 65 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVD 124
Query: 63 PMVT 66
P+V+
Sbjct: 125 PLVS 128
>UNIPROTKB|F1MAX6 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
GeneTree:ENSGT00550000074466 EMBL:DAAA02033094 IPI:IPI00824872
Ensembl:ENSBTAT00000052665 Uniprot:F1MAX6
Length = 499
Score = 268 (99.4 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 74/210 (35%), Positives = 114/210 (54%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 269 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 328
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 329 D---EHEASRRVKSELLIQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 373
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + L D+ L+++ + SGADI
Sbjct: 374 DEALRR--RLEKRIYIPLPTAKGRTELLKINLREVELDPDIQLEDIAEKIEGYSGADITN 431
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R ++ E+ + SKE +
Sbjct: 432 VCRDASLMAMRRRINGLSPEEIRALSKEEL 461
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 191 (72.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 42/115 (36%), Positives = 69/115 (60%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++DPAL R GR DR+++ +PD +
Sbjct: 52 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 111
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M LA+DV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 112 ILQIHTKNMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLED 166
Score = 188 (71.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 48/140 (34%), Positives = 78/140 (55%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ T +V +I ATNR + +DPA++RPGR+D+ I PLPDE
Sbjct: 327 GAADRVINQILTEMDGMST----KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 382
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
K++ I + + +A+DV+L L + SGAD+ IC A +A+RE ++ E
Sbjct: 383 KSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRE 442
Query: 295 DFKKSKESVL-YRKKEGTPE 313
+++ S + + + PE
Sbjct: 443 RERQTNPSAMEVEEDDPVPE 462
Score = 140 (54.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VRE+F A + AP ++F DE+D++ R +
Sbjct: 262 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 321
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
G R + ++L ++DG ++
Sbjct: 322 IGDGGGAADRVINQILTEMDGMSTK 346
Score = 127 (49.8 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 110 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLE 169
G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR ++ GE E +R + +
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH--GEVE-RRIVSQ 59
Query: 170 LLNQLDGFDSR 180
LL +DG R
Sbjct: 60 LLTLMDGLKQR 70
Score = 55 (24.4 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 259 LAKAIANECQANFISIKGPELLTMWFGE 286
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 173 (66.0 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + F SE ++ ++G G VR+LF A+ AP IVFIDEIDAVG +R
Sbjct: 302 AVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAG 361
Query: 156 NSGGEREIQRTMLELLNQLDGF 177
GG E ++T+ +LL ++DGF
Sbjct: 362 MGGGNDEREQTINQLLTEMDGF 383
Score = 161 (61.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 30/103 (29%), Positives = 59/103 (57%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V V+ ATNR + LD AL+RPGR DR++ PD + +I +H+ + +DV+ +++
Sbjct: 389 VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVA 448
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
+GAD++ + EA ++A R +++ ++ + E ++
Sbjct: 449 RRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERII 491
Score = 43 (20.2 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ AVA + F SE ++ ++G G
Sbjct: 299 LARAVAGEAGVPFFSCAASEFVELFVGVG 327
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 169 (64.5 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 36/84 (42%), Positives = 56/84 (66%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + F V SE ++ ++G G +R+LF A +++PSI+FIDE+DAVG KR S
Sbjct: 386 AVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRS 445
Query: 156 NSGGEREIQRTMLELLNQLDGFDS 179
+ ER+ +T+ +LL ++DGF+S
Sbjct: 446 FND-ERD--QTLNQLLTEMDGFES 466
Score = 164 (62.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 47/121 (38%), Positives = 62/121 (51%)
Query: 201 DVKVIM--ATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQ 258
D KVI+ ATNR E LD AL RPGR RK+ PD++ +R+I IH + L ED L
Sbjct: 467 DTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLI 526
Query: 259 -ELIMA-KDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLY--RKKEGTPEG 314
+L+ + GAD+ I EA L+A R V ED ++ E + KE P
Sbjct: 527 CDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDIMEAIERAKFGINDKEARPRT 586
Query: 315 L 315
L
Sbjct: 587 L 587
Score = 47 (21.6 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ AVA + F V SE ++ ++G G
Sbjct: 383 LARAVAGEAGVPFFSVSASEFVELFVGRG 411
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 167 (63.8 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 43/119 (36%), Positives = 66/119 (55%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLA---EDVNLQ 258
V ++ ATN+ +DPAL+RPGR+DR I PD + +I + + L E V+LQ
Sbjct: 637 VVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDESVDLQ 696
Query: 259 ELIMAKDDLSGADIKAICTEAGLMALRERR--MKVTNEDFKKSKESVLYRKKEGTPEGL 315
+L D SGA++ +C EAGL A+ E + VTN+ F+ + + + + TPE L
Sbjct: 697 KLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALKGI---SRGITPEML 752
Score = 156 (60.0 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 32/83 (38%), Positives = 49/83 (59%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A ++ FL V G E+ KY+G+ + +RE+FR A +PSI+F DEIDA+ R D
Sbjct: 552 ALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDR-DG 610
Query: 156 NSGGEREIQRTMLELLNQLDGFD 178
+S + LLN++DG +
Sbjct: 611 DSS-TTAASNVLTSLLNEIDGVE 632
Score = 146 (56.5 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 97 VANQ-TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
VAN T A L + G ++ KYLG+ +R++F A++ PSI+F+DEID++ R S
Sbjct: 283 VANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSR-TS 341
Query: 156 NSGGEREIQRTMLELLNQLDG 176
+ GE E R + +LL +DG
Sbjct: 342 DDSGETE-SRVVAQLLTVMDG 361
Score = 127 (49.8 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 35/121 (28%), Positives = 62/121 (51%)
Query: 200 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAE-DVNLQ 258
G + VI ATNR ++D AL RPGR D+++E +PD + + I ++M + + +
Sbjct: 366 GRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSEKCQITKE 425
Query: 259 EL--IMAKDD-LSGADIKAICTEAGLMAL-RERRMKVTNEDFKKSKESVLYRKKEGTPEG 314
E+ I +K GAD+ A+C E+ + A+ R + + K + + V + E P
Sbjct: 426 EIASIASKTHGYVGADLTALCRESVMKAINRGLTVGIPQTAIKVTVDDVYHALPEIRPSA 485
Query: 315 L 315
+
Sbjct: 486 M 486
Score = 56 (24.8 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPK 94
A+A ++ FL V G E+ KY+G+ +
Sbjct: 552 ALATESGLNFLAVKGPEIFNKYVGESER 579
Score = 50 (22.7 bits), Expect = 1.9e-22, Sum P(3) = 1.9e-22
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 64 MVTAVANQ-TSATFLRVVGSELIQKYLGD 91
++ VAN T A L + G ++ KYLG+
Sbjct: 279 LLRCVANSITEAHVLTINGPSIVSKYLGE 307
Score = 50 (22.7 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 125 VRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLN-QLDGFDSRVQN 183
V +++ E PS + EI K + S+ GG+ E++R ++E++ L+ DS +N
Sbjct: 471 VDDVYHALPEIRPSAM--REIFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDS-FKN 527
Query: 184 RRLSEVYSSLTLIYLPGDVKVIMA 207
+S L L PG K + A
Sbjct: 528 LGVSSPKGVL-LYGPPGCSKTLTA 550
Score = 45 (20.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 12/47 (25%), Positives = 28/47 (59%)
Query: 273 KAICTEAGLMALRERRMKVTNEDFKKSKESV--LYRK-KEGTPEGLY 316
KA+ TE+GL L + ++ N+ +S+ ++ ++RK + +P ++
Sbjct: 551 KALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIF 597
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 191 (72.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 42/115 (36%), Positives = 68/115 (59%)
Query: 181 VQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 240
V+ R +S++ + + + V V+ ATNR ++D AL R GR DR+I+ +PD +
Sbjct: 322 VERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLE 381
Query: 241 IFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
I IHT M L+EDV+L+++ GAD+ A+C+EA L A+R++ + ED
Sbjct: 382 ILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLED 436
Score = 175 (66.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 47/140 (33%), Positives = 78/140 (55%)
Query: 176 GFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 235
G RV N+ L+E+ +T +V +I ATNR + +DPA++RPGR+D+ I PLPD
Sbjct: 597 GAADRVINQILTEM-DGMTN---KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDM 652
Query: 236 KTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRER-RMKVTNE 294
++ I + + +A+DV+L L + SGAD+ IC A +A+RE ++ E
Sbjct: 653 PSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAEIRAE 712
Query: 295 DFKKS-KESVLYRKKEGTPE 313
+++ KE+ + + PE
Sbjct: 713 RQRQARKETAMDDDYDPVPE 732
Score = 158 (60.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE++AP+I+FIDE+DA+ KR +
Sbjct: 259 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT 318
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
+ GE E +R + +LL +DG R
Sbjct: 319 H--GEVE-RRIVSQLLTLMDGLKQR 340
Score = 130 (50.8 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VR++F A + AP I+F DE+D++ R
Sbjct: 532 AIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGG 591
Query: 156 --NSGGEREIQRTMLELLNQLDGFDSR 180
++GG + R + ++L ++DG ++
Sbjct: 592 AGDAGGAAD--RVINQILTEMDGMTNK 616
Score = 55 (24.4 bits), Expect = 3.3e-21, Sum P(3) = 3.3e-21
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 259 AVANETGAFFFLINGPEIMSKLAGE 283
Score = 54 (24.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 529 LAKAIANECQANFVSIKGPELLTMWFGE 556
>UNIPROTKB|F6V168 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 Ensembl:ENSCAFT00000010676
EMBL:AAEX03014230 RefSeq:XP_543146.2 ProteinModelPortal:F6V168
GeneID:486020 KEGG:cfa:486020 Uniprot:F6V168
Length = 490
Score = 265 (98.3 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 74/210 (35%), Positives = 113/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 260 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 319
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 320 D---EHEASRRVKSELLIQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 364
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + L D+ L+++ + SGADI
Sbjct: 365 DEALRR--RLEKRIYIPLPTAKGRTELLKINLREVELDPDIQLEDIAEKIEGYSGADITN 422
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R + E+ + SKE +
Sbjct: 423 VCRDASLMAMRRRINGLGPEEIRALSKEEL 452
>UNIPROTKB|E2QSK3 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
Ensembl:ENSCAFT00000010676 Uniprot:E2QSK3
Length = 492
Score = 265 (98.3 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 74/210 (35%), Positives = 113/210 (53%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + TF V S L KY G+ KLVR LF +A +AP+ +FIDEID++ ++R S
Sbjct: 262 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 321
Query: 156 NSGGEREIQRTML-ELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETL 214
+ E E R + ELL Q+DG ++N S++ V V+ ATN +
Sbjct: 322 D---EHEASRRVKSELLIQMDGVGGALENDDPSKM------------VMVLAATNFPWDI 366
Query: 215 DPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKA 274
D AL R R++++I PLP K + + I+ + L D+ L+++ + SGADI
Sbjct: 367 DEALRR--RLEKRIYIPLPTAKGRTELLKINLREVELDPDIQLEDIAEKIEGYSGADITN 424
Query: 275 ICTEAGLMALRERRMKVTNEDFKK-SKESV 303
+C +A LMA+R R + E+ + SKE +
Sbjct: 425 VCRDASLMAMRRRINGLGPEEIRALSKEEL 454
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 187 (70.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 41/118 (34%), Positives = 69/118 (58%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+ V+ R +S++ + + + ++ VI ATNR ++D AL R GR DR+I+ +PD
Sbjct: 323 NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 382
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ I IHT M LA+DV+L+++ GAD+ ++C+EA L +RE+ + ED
Sbjct: 383 RLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLED 440
Score = 172 (65.6 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 37/104 (35%), Positives = 63/104 (60%)
Query: 183 NRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 242
+R +++V + + + +V +I ATNR + +DPA++RPGR+D+ I PLPDE ++ +I
Sbjct: 605 DRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQIL 664
Query: 243 NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRE 286
+ L++D++L L SGAD+ IC A +A+RE
Sbjct: 665 KASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRE 708
Score = 148 (57.2 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T + F + G E++ K G+ +R+ F E++ P+I+FIDEIDA+ KR +
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT 322
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
N GE E +R + +LL +DG R
Sbjct: 323 N--GEVE-RRIVSQLLTLMDGVKGR 344
Score = 130 (50.8 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VR++F A AP ++F DE+D++ R
Sbjct: 536 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGG 595
Query: 156 NSG-GEREIQRTMLELLNQLDGFDSR 180
G G R + ++L ++DG +++
Sbjct: 596 AGGDGGGASDRVINQVLTEMDGMNAK 621
Score = 55 (24.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 533 LAKAIANECQANFISIKGPELLTMWFGE 560
Score = 51 (23.0 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ + N IV S ++ V +S D+L G +V+L K +V +
Sbjct: 18 LSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAII 77
Query: 57 LSDDTDPMVTAVANQTSATFLRV 79
+SD++ P N+ LR+
Sbjct: 78 VSDESCPNEKVRMNRVVRNNLRI 100
Score = 50 (22.7 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T + F + G E++ K G+
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGE 287
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 187 (70.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 41/118 (34%), Positives = 69/118 (58%)
Query: 178 DSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT 237
+ V+ R +S++ + + + ++ VI ATNR ++D AL R GR DR+I+ +PD
Sbjct: 323 NGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVG 382
Query: 238 KRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
+ I IHT M LA+DV+L+++ GAD+ ++C+EA L +RE+ + ED
Sbjct: 383 RLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLED 440
Score = 172 (65.6 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 37/104 (35%), Positives = 63/104 (60%)
Query: 183 NRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 242
+R +++V + + + +V +I ATNR + +DPA++RPGR+D+ I PLPDE ++ +I
Sbjct: 605 DRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQIL 664
Query: 243 NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRE 286
+ L++D++L L SGAD+ IC A +A+RE
Sbjct: 665 KASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRE 708
Score = 148 (57.2 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T + F + G E++ K G+ +R+ F E++ P+I+FIDEIDA+ KR +
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT 322
Query: 156 NSGGEREIQRTMLELLNQLDGFDSR 180
N GE E +R + +LL +DG R
Sbjct: 323 N--GEVE-RRIVSQLLTLMDGVKGR 344
Score = 130 (50.8 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ + G EL+ + G+ VR++F A AP ++F DE+D++ R
Sbjct: 536 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGG 595
Query: 156 NSG-GEREIQRTMLELLNQLDGFDSR 180
G G R + ++L ++DG +++
Sbjct: 596 AGGDGGGASDRVINQVLTEMDGMNAK 621
Score = 55 (24.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ + G EL+ + G+
Sbjct: 533 LAKAIANECQANFISIKGPELLTMWFGE 560
Score = 51 (23.0 bits), Expect = 2.9e-22, Sum P(3) = 2.9e-22
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 1 MSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLE--PGCSVLLNHKVH--AVVGV 56
+S L++ + N IV S ++ V +S D+L G +V+L K +V +
Sbjct: 18 LSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAII 77
Query: 57 LSDDTDPMVTAVANQTSATFLRV 79
+SD++ P N+ LR+
Sbjct: 78 VSDESCPNEKVRMNRVVRNNLRI 100
Score = 50 (22.7 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T + F + G E++ K G+
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGE 287
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 188 (71.2 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 42/127 (33%), Positives = 70/127 (55%)
Query: 175 DGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 234
D V+ R +S++ + + + + V+ ATNR ++DPAL R GR DR+I+ +PD
Sbjct: 311 DKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPD 370
Query: 235 EKTKRRIFNIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNE 294
+ + IHT M L +DV+L+++ GAD+ ++C+EA L +RE+ + E
Sbjct: 371 ATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLE 430
Query: 295 DFKKSKE 301
D K E
Sbjct: 431 DDKIDAE 437
Score = 177 (67.4 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 35/104 (33%), Positives = 64/104 (61%)
Query: 183 NRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIF 242
+R ++++ + + + +V +I ATNR + +DPA++RPGR+D+ I PLPD+K++ I
Sbjct: 595 DRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAIL 654
Query: 243 NIHTSRMTLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALRE 286
+ + LA++V+L + SGAD+ IC A +A+R+
Sbjct: 655 KANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQ 698
Score = 153 (58.9 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVAN+T A F + G E++ K G+ +R+ F AE+++P+I+FIDEIDA+ KR D
Sbjct: 254 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR-DK 312
Query: 156 NSGGEREIQRTML-ELLNQLDG 176
G E++R ++ +LL +DG
Sbjct: 313 THG---EVERRIVSQLLTLMDG 331
Score = 131 (51.2 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+AN+ A F+ V G EL+ + G+ VR++F A AP ++F DE+D++ R +
Sbjct: 527 AIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGN 586
Query: 156 --NSGGEREIQRTMLELLNQLDGFDSR 180
++GG + R + ++L ++DG ++
Sbjct: 587 VGDAGGAAD--RVINQILTEMDGMGAK 611
Score = 56 (24.8 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
+ A+AN+ A F+ V G EL+ + G+
Sbjct: 524 LAKAIANECQANFISVKGPELLTMWFGE 551
Score = 55 (24.4 bits), Expect = 1.4e-21, Sum P(3) = 1.4e-21
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGD 91
AVAN+T A F + G E++ K G+
Sbjct: 254 AVANETGAFFFLINGPEIMSKLAGE 278
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 184 (69.8 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 45/120 (37%), Positives = 74/120 (61%)
Query: 168 LELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRK 227
++ L G D+ +R ++ + + L I +V V+ ATNR + +DPAL+RPGR+DR
Sbjct: 650 IDALTANRGEDNS-SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRL 708
Query: 228 IEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELIMAKDD-LSGADIKAICTEAGLMALRE 286
+ P+ + +++I I +M AEDV+L +LI K + SGA++ A+C EAGL+A+ E
Sbjct: 709 LYVGPPNFEARKQIVKIQAEKMKFAEDVDL-DLIAEKTEGCSGAEVVALCQEAGLIAMHE 767
Score = 143 (55.4 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + +A + G ++ KYLG+ +R++F A H PSI+FIDEIDA+ KR +
Sbjct: 332 AVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTED 391
Query: 156 NSGGEREIQRTMLELLN 172
S E T+L LL+
Sbjct: 392 VSEAESRAVATLLTLLD 408
Score = 142 (55.0 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
Identities = 35/108 (32%), Positives = 59/108 (54%)
Query: 179 SRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 238
S ++R ++ + + L + G V VI ATNR ++D AL RPGR++++IE +PD+ +
Sbjct: 393 SEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSAR 452
Query: 239 RRIFNIHTSRM-TLAEDVNLQELIMAKDDLSGADIKAICTEAGLMALR 285
I + S + D L++L GAD+ A+ EA L A++
Sbjct: 453 LDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK 500
Score = 58 (25.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 67 AVANQTSATFLRVVGSELIQKYLGDGPK 94
A+A +T F+ V G EL K++G+ +
Sbjct: 601 AIATETGLNFIAVKGPELFDKFVGESER 628
Score = 46 (21.3 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGD 91
++ AVA + +A + G ++ KYLG+
Sbjct: 329 VMRAVAAEANAQVFTIDGPSVVGKYLGE 356
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 265 (98.3 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 73/214 (34%), Positives = 112/214 (52%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
AVA + FL + GSE I+ G G VR+LF+ ++ AP I++IDEIDA+G +R +
Sbjct: 393 AVATEAQVPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGT 452
Query: 156 NS---GGEREIQRTMLELLNQLDGFDSRVQNRRLSEVYSSLTLIYLPGDVKVIMATNRIE 212
S G E ++T+ +LL ++DG ++ G V ++ +TNR +
Sbjct: 453 ESMGQGSSGESEQTLNQLLVEMDGMATK------------------EG-VLMLASTNRAD 493
Query: 213 TLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNL--QELIMAKDDLSGA 270
LD AL+RPGR DR I LP ++ IF H S + L Q L SGA
Sbjct: 494 ILDKALLRPGRFDRHILIDLPTLAERKEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGA 553
Query: 271 DIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
DI +C EA L A R +M+V++++ + + E ++
Sbjct: 554 DIANVCNEAALHAARNTQMEVSSKNLEYAVERLV 587
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 168 (64.2 bits), Expect = 8.6e-22, Sum P(2) = 8.6e-22
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A A + + FL V GSE ++ ++G G VR+LF A APSI+FIDEIDA+G +R
Sbjct: 340 ATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKG 399
Query: 156 NS-GGER-EIQRTMLELLNQLDGFDSRVQ 182
+ GG E + T+ +LL ++DGF + Q
Sbjct: 400 GALGGANDEREATLNQLLVEMDGFTTSDQ 428
Score = 160 (61.4 bits), Expect = 8.6e-22, Sum P(2) = 8.6e-22
Identities = 40/109 (36%), Positives = 60/109 (55%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTL----AEDVN- 256
V V+ TNR + LD AL+RPGR DR I+ PD +++I+ +H R+ L +D+N
Sbjct: 429 VVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVHLKRLNLDPLLTDDMNN 488
Query: 257 LQ-ELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 304
L +L +GADI C EA L+A R +T F+++ E V+
Sbjct: 489 LSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVI 537
Score = 54 (24.1 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 64 MVTAVANQTSATFLRVVGSELIQKYLGDG 92
+ A A + + FL V GSE ++ ++G G
Sbjct: 337 LAKATAGEANVPFLSVSGSEFVEMFVGVG 365
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 170 (64.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 50/166 (30%), Positives = 79/166 (47%)
Query: 26 YVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTAVA------NQTSATFLRV 79
++ LS V G V + A +G L D + + A+ Q A L
Sbjct: 556 FIVALSSVQPSAKREGF-VTIPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTT 614
Query: 80 VGSELIQKYLGDGPKL---AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHA 136
L+ G G L AVAN++ F+ V G EL+ Y+G+ + VR++F+ A A
Sbjct: 615 PAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSA 674
Query: 137 PSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRVQ 182
P ++F DE+DA+ +R D SG R + +LL ++DG ++R Q
Sbjct: 675 PCVIFFDEVDALCPRRSDRESGAS---VRVVNQLLTEMDGLENRQQ 717
Score = 158 (60.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 39/111 (35%), Positives = 63/111 (56%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHT---SRMTLAEDVNLQ 258
V ++ ATNR + +DPA++RPGR+D+ + LP + + I T +R L DVNL+
Sbjct: 718 VFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDTDVNLE 777
Query: 259 ELIMAK--DDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRK 307
E+ ++ D +GAD+ A+ EA + ALR+ T + K+ E + RK
Sbjct: 778 EIAYSQQCDCYTGADLSALVREASICALRQEMALPTTKSKKEKGEIKISRK 828
Score = 136 (52.9 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 202 VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFNIHTSRMTLAEDVNLQELI 261
V VI ATNR ++LDPAL R GR DR+I +PDE + +I ++ L + L
Sbjct: 399 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREKILQTLCRKLKLPGSFDFLHLA 458
Query: 262 MAKDDLSGADIKAICTEAGLMALRERRMKVTNED 295
GAD+ A+C EA + + R+ + +E+
Sbjct: 459 HLTPGYVGADLMALCREAAMCTVN--RVLIKSEE 490
Score = 127 (49.8 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 96 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 155
A+A + L+V +E++ G+ + +RELF A +AP ++FIDEIDA+ KR +
Sbjct: 312 AIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVA 371
Query: 156 NSGGEREIQRTMLELLNQLDGFDSRVQ 182
+ ER I +L L+ L+ + Q
Sbjct: 372 SKDMERRIVAQLLTCLDDLNNVAATAQ 398
Score = 42 (19.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 217 ALIRPGRIDR-KIEFPLPDEKTKRRIFNIHTSRMTLAEDVN-LQELIMAKDDLSGADIK- 273
AL+R I + E LP K+K+ I SR E ++ + KD + +++
Sbjct: 795 ALVREASICALRQEMALPTTKSKKEKGEIKISRKHFEEAFRKVKSSVSKKDQIMYEELRQ 854
Query: 274 AIC 276
++C
Sbjct: 855 SLC 857
WARNING: HSPs involving 383 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 317 317 0.00083 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 633
No. of states in DFA: 564 (60 KB)
Total size of DFA: 170 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 26.49u 0.09s 26.58t Elapsed: 00:00:40
Total cpu time: 26.54u 0.09s 26.63t Elapsed: 00:00:44
Start: Thu Aug 15 13:22:01 2013 End: Thu Aug 15 13:22:45 2013
WARNINGS ISSUED: 2