BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7785
(525 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91095067|ref|XP_972655.1| PREDICTED: similar to succinyl-coa synthetase beta chain [Tribolium
castaneum]
gi|270014754|gb|EFA11202.1| hypothetical protein TcasGA2_TC005166 [Tribolium castaneum]
Length = 414
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/395 (61%), Positives = 295/395 (74%), Gaps = 34/395 (8%)
Query: 29 CLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKM 88
C+ D + + K N KEYVIKAQILAGGRG GHF NGFK GVH T ++ I++KM
Sbjct: 47 CMVDDKGCSEFDK-FNVKEYVIKAQILAGGRGKGHFTNGFKGGVHVTEKRNEVDDIVKKM 105
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+GH+LITKQTPK GI V K+M A+SVNI RETY CI+ DR NGPV+I SP+GG DIE V
Sbjct: 106 LGHRLITKQTPKDGIEVKKIMFAESVNIQRETYVCILMDRQKNGPVLIASPAGGVDIEAV 165
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A KTPHL+K IPID+H+G+T+S+A ++A+FLEF+G LK AA E++KLW
Sbjct: 166 AEKTPHLIKNIPIDIHKGVTDSMANEVAEFLEFKGPLKGLAAAELKKLW----------- 214
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
FL+VDATQLEINPLVETD +VI+VDAKINFDDNA+
Sbjct: 215 ----------------------QFFLAVDATQLEINPLVETDNNKVIAVDAKINFDDNAQ 252
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQK+IF+ +V+ESDPREV+A+KYNLNY+GM GNIGCLVNGAGLAMATMDIIKLHGG+P
Sbjct: 253 FRQKDIFALEDVTESDPREVEAAKYNLNYIGMTGNIGCLVNGAGLAMATMDIIKLHGGDP 312
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGG V EE + AF I++SD NVKCILVNVFGGIVNCATIA G+V A K+ KL +
Sbjct: 313 ANFLDVGGSVREEQVKAAFNILTSDKNVKCILVNVFGGIVNCATIANGIVGAMKAMKLEV 372
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PL+VRLEGTN E +RI+ +S + + A +LD+AA
Sbjct: 373 PLIVRLEGTNAAEARRIIKDSGMNIQTAENLDDAA 407
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K+ KL +PL+VRLEGTN E +RI+ +S + + A +LD+AA
Sbjct: 358 ANGIVGAMKAMKLEVPLIVRLEGTNAAEARRIIKDSGMNIQTAENLDDAA 407
>gi|157110382|ref|XP_001651078.1| succinyl-coa synthetase beta chain [Aedes aegypti]
gi|157110384|ref|XP_001651079.1| succinyl-coa synthetase beta chain [Aedes aegypti]
gi|108878750|gb|EAT42975.1| AAEL005552-PA [Aedes aegypti]
gi|403182723|gb|EJY57594.1| AAEL005552-PB [Aedes aegypti]
Length = 421
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 235/392 (59%), Positives = 290/392 (73%), Gaps = 33/392 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+ + ++L+D N EYV+KAQILAGGRG GHFDNGFK GVH T + + P++EKM+GH
Sbjct: 55 EGKKDESVLQDFNVNEYVVKAQILAGGRGKGHFDNGFKGGVHITKDRSQVIPLVEKMVGH 114
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
+LITKQTPK GI V KVMVA S+NI RETY IV DR HNGPV+I SP+GG DIE VA +
Sbjct: 115 RLITKQTPKDGIMVKKVMVADSINIVRETYLSIVMDREHNGPVLIASPAGGMDIEAVAEE 174
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP +KTIP+ V GIT + A+++A FLEF+G+L KAA E++KL
Sbjct: 175 TPDKIKTIPVSVVDGITHAQAEEVARFLEFKGNLVQKAAAEIEKL--------------- 219
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
++LF+ VDATQ+EINPL ETD+ VISVDAK+NFDDNA+FRQ
Sbjct: 220 ------------------YHLFVKVDATQIEINPLAETDDGRVISVDAKLNFDDNAQFRQ 261
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K+IF+ + ++DP+E++A KYNLNY+ M+GNIGCLVNGAGLAMATMDIIKL+GG PANF
Sbjct: 262 KDIFAMDVHEDTDPKEIEAHKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANF 321
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGG V EE +++AF+I++SD NVK ILVNVFGGIVNCATIA G+VNA K+ L +PLV
Sbjct: 322 LDVGGNVKEEQVLKAFQILTSDPNVKAILVNVFGGIVNCATIANGIVNATKTIGLKVPLV 381
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VRLEGTNV K+IL ES L + A DLDEAA
Sbjct: 382 VRLEGTNVDAAKKILKESGLKIESAHDLDEAA 413
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA K+ L +PLVVRLEGTNV K+IL ES L + A DLDEAA
Sbjct: 364 ANGIVNATKTIGLKVPLVVRLEGTNVDAAKKILKESGLKIESAHDLDEAA 413
>gi|158292075|ref|XP_313633.4| AGAP004352-PA [Anopheles gambiae str. PEST]
gi|347971751|ref|XP_003436791.1| AGAP004352-PB [Anopheles gambiae str. PEST]
gi|157017261|gb|EAA09142.4| AGAP004352-PA [Anopheles gambiae str. PEST]
gi|333469012|gb|EGK97149.1| AGAP004352-PB [Anopheles gambiae str. PEST]
Length = 423
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/392 (60%), Positives = 288/392 (73%), Gaps = 33/392 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+ + ++LKD + EYV+KAQILAGGRG GHFDNGFK GVH T N ++ P++EKM+GH
Sbjct: 55 EGKKDADVLKDFDVNEYVVKAQILAGGRGKGHFDNGFKGGVHITKNRAEVIPLVEKMVGH 114
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
KLITKQTPK GI V KVMVA S+NI RETY IV DR HNGPV+I SP GG DIE VA +
Sbjct: 115 KLITKQTPKDGILVKKVMVADSINIVRETYLSIVMDREHNGPVLIASPDGGMDIEAVAEE 174
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP+ +KTIPID+ GI+ A D+A FLEF+G L KAA E+ K
Sbjct: 175 TPNRIKTIPIDITSGISREQAIDVARFLEFKGFLVDKAADEITK---------------- 218
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
L+ LF VDA Q+EINPL ETD+ VISVDAK+NFDDNA+FRQ
Sbjct: 219 -----------------LYGLFTKVDAVQIEINPLAETDDGRVISVDAKLNFDDNAQFRQ 261
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K+IF+ ++DP+EV+ASKYNLNY+ M+GNIGCLVNGAGLAMATMDIIKL+GG PANF
Sbjct: 262 KDIFAMEVHEDTDPKEVEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANF 321
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGG V E+ +++AF+I++SD+NVK ILVNVFGGIVNCATIA G+VNA K+ L +PL+
Sbjct: 322 LDVGGNVKEDQVLKAFQILTSDTNVKAILVNVFGGIVNCATIANGIVNATKTMNLQVPLI 381
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VRLEGTNVQ K+IL++S L + A DLDEAA
Sbjct: 382 VRLEGTNVQAAKKILEQSGLKIESAHDLDEAA 413
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA K+ L +PL+VRLEGTNVQ K+IL++S L + A DLDEAA
Sbjct: 364 ANGIVNATKTMNLQVPLIVRLEGTNVQAAKKILEQSGLKIESAHDLDEAA 413
>gi|170038855|ref|XP_001847263.1| succinyl-CoA ligase beta-chain, mitochondrial [Culex
quinquefasciatus]
gi|167862454|gb|EDS25837.1| succinyl-CoA ligase beta-chain, mitochondrial [Culex
quinquefasciatus]
Length = 419
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 237/392 (60%), Positives = 286/392 (72%), Gaps = 33/392 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+ R ++LKD N EYV+KAQILAGGRG GHFDNGFK GVH T + + P++EKM+G
Sbjct: 53 EGRKDEDVLKDFNVNEYVVKAQILAGGRGKGHFDNGFKGGVHITKDRSKVIPLVEKMVGA 112
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
KLITKQTPK GI V VMVA S+NI RETY IV DR HNGPV+I SP+GG DIE VA +
Sbjct: 113 KLITKQTPKDGILVKSVMVADSINIVRETYLSIVMDREHNGPVLIASPAGGMDIEAVAEE 172
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP +KT+PI + GI+ + A+D+A FLEF+G L AATE++KL++LF QK
Sbjct: 173 TPEKIKTVPISILAGISRAQAEDVARFLEFKGPLVQTAATEIEKLYSLF-----QK---- 223
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
VD TQ+EINPL ETD+ VISVDAK+NFDDNAEFRQ
Sbjct: 224 ------------------------VDCTQIEINPLAETDDGRVISVDAKLNFDDNAEFRQ 259
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K+IF+ ++DP+E++ASKYNLNY+ M+GNIGCLVNGAGLAMATMDIIKL+GG PANF
Sbjct: 260 KDIFAMEVHEDTDPKEIEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGAPANF 319
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGG V E+ +++AF+I++SD NVK ILVNVFGGIVNCATIA G+VNA K L +PLV
Sbjct: 320 LDVGGNVKEDQVLKAFQILTSDQNVKAILVNVFGGIVNCATIANGIVNATKVIGLRVPLV 379
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VRLEGTNV K+IL ES L + A DLDEAA
Sbjct: 380 VRLEGTNVNAAKKILQESGLKIESAQDLDEAA 411
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +VNA K L +PLVVRLEGTNV K+IL ES L + A DLDEAA + A
Sbjct: 362 ANGIVNATKVIGLRVPLVVRLEGTNVNAAKKILQESGLKIESAQDLDEAAKKAVQA 417
>gi|193713938|ref|XP_001946802.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Acyrthosiphon pisum]
Length = 424
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/394 (59%), Positives = 292/394 (74%), Gaps = 33/394 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
+E+A N+LK + EYV+KAQ+LAGGRG GHF+NGFK GVH T I +L+ M+
Sbjct: 55 VENADETNNLLKSFDVDEYVLKAQVLAGGRGKGHFNNGFKGGVHVTKERTKIYDLLKNML 114
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G+KLITKQTPK GI V KVMVA+SV+I RETYFCI+ DR NGPV+I SP+GG DIE++A
Sbjct: 115 GYKLITKQTPKDGILVTKVMVAESVDIKRETYFCILMDRSQNGPVLIASPAGGMDIEDIA 174
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+P L+K IPID+ +GI++++A D+A FL F L + AA E+++LW
Sbjct: 175 INSPELIKKIPIDIFEGISDTVALDVAKFLNFNEPLASVAANEIKRLW------------ 222
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
EF FLSVDA Q+EINPLVET + +V+ VDAKI FDDN++F
Sbjct: 223 ---EF------------------FLSVDAVQIEINPLVETLDNKVVCVDAKIQFDDNSQF 261
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R K IF +E SESDPREV A+K+NL+Y+GMDGNIGCLVNGAGLAMATMDIIKL GGEPA
Sbjct: 262 RHKEIFELDETSESDPREVMANKHNLSYIGMDGNIGCLVNGAGLAMATMDIIKLRGGEPA 321
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGG VNE + +AF++++ DS+VK ILVNVFGGIVNCATIAKGL+NA + L +P
Sbjct: 322 NFLDVGGNVNENQVYEAFKLLTLDSSVKAILVNVFGGIVNCATIAKGLINASRKLDLQVP 381
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LVVRLEGTNV GK++L+ES LP+ FASDLDEAA
Sbjct: 382 LVVRLEGTNVSAGKKLLEESGLPIEFASDLDEAA 415
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+NA + L +PLVVRLEGTNV GK++L+ES LP+ FASDLDEAA
Sbjct: 366 AKGLINASRKLDLQVPLVVRLEGTNVSAGKKLLEESGLPIEFASDLDEAA 415
>gi|321476532|gb|EFX87492.1| hypothetical protein DAPPUDRAFT_306482 [Daphnia pulex]
Length = 420
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/400 (58%), Positives = 290/400 (72%), Gaps = 33/400 (8%)
Query: 24 STDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPP 83
+ K + D TN L LN EYV+KAQILAGGRGLG FD+GFK GVH T +
Sbjct: 47 TVQKFIVADKIEDTNSLSKLNPGEYVVKAQILAGGRGLGVFDSGFKGGVHLTKDPVKAKS 106
Query: 84 ILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGT 143
++ +M+ +LITKQTPK GI VN VMVA+SV+I RETY CI+ DR +NGPV+I SP+GG
Sbjct: 107 LVGEMLNKRLITKQTPKDGIPVNHVMVAESVDILRETYLCILMDREYNGPVIIASPAGGM 166
Query: 144 DIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSS 203
DIE+VA KTP L+KT+P+D+ +G+T+ +A D+A+F
Sbjct: 167 DIEDVAHKTPELIKTLPVDIFEGVTDQMANDLAEF------------------------- 201
Query: 204 LAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINF 263
L F+GDLK KAA E++ LW +FL VDA Q+EINP VET + +V+SVDAKI F
Sbjct: 202 --------LLFKGDLKKKAAQEIKNLWEMFLKVDAVQVEINPFVETPQGQVVSVDAKIGF 253
Query: 264 DDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKL 323
DDNA+FRQ+ IF + +E DPREV+A+KYNLNY+GMDGNIGCLVNGAGLAMATMDII+L
Sbjct: 254 DDNAKFRQQEIFDMEDTTECDPREVEANKYNLNYIGMDGNIGCLVNGAGLAMATMDIIQL 313
Query: 324 HGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKS 383
+G PANFLDVGG V E+ ++QAF+I++SD NVK ILVNVFGGIVNCATIA G+V ACK
Sbjct: 314 YGASPANFLDVGGTVQEQQVLQAFQILTSDKNVKAILVNVFGGIVNCATIASGIVGACKR 373
Query: 384 FKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+L +PL+VRLEGTNV K+IL +S LP+ ASDLD+AA
Sbjct: 374 IELKVPLIVRLEGTNVDAAKQILKDSGLPIQSASDLDDAA 413
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +V ACK +L +PL+VRLEGTNV K+IL +S LP+ ASDLD+AA
Sbjct: 364 ASGIVGACKRIELKVPLIVRLEGTNVDAAKQILKDSGLPIQSASDLDDAA 413
>gi|195126843|ref|XP_002007878.1| GI13181 [Drosophila mojavensis]
gi|193919487|gb|EDW18354.1| GI13181 [Drosophila mojavensis]
Length = 420
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/395 (61%), Positives = 288/395 (72%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L+++ T T ++ + EYV+KAQILAGGRG G FDNGFK GVH T+N D+ + +KMI
Sbjct: 52 LDNSSTDTQVVNSFDCPEYVVKAQILAGGRGKGIFDNGFKGGVHITSNKNDVLALSKKMI 111
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPKTGI VNKVMVA+SVNITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 112 GNRLITKQTPKTGILVNKVMVARSVNITRETYVCILLDREHNGPVLIASPAGGMDIEAVA 171
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP + T+P+D+ + I E +A FLEF+GD + A E+QKL
Sbjct: 172 EETPEKLLTVPLDIDKPIPEDKLIQVAKFLEFKGDAIKRCADEIQKL------------- 218
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+ LF SVDA Q+EINPL ETD EVISVDAK+NFDDNA+F
Sbjct: 219 --------------------YTLFKSVDAVQIEINPLAETDTGEVISVDAKLNFDDNAQF 258
Query: 270 RQKNIFSQNEV-SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK IF+ + ESDPREV+ASKYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 259 RQKEIFAMDVTEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 318
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGVNE+ + +AF I++SD VK ILVNVFGGIVNCATIA G+V A K KL++
Sbjct: 319 ANFLDVGGGVNEQQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNV 378
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 379 PLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAA 413
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A K KL++PLVVRLEGTNV + + IL S LP+ ASDLD+AA+
Sbjct: 364 ANGIVAASKKLKLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAH 414
>gi|195377210|ref|XP_002047385.1| GJ11957 [Drosophila virilis]
gi|194154543|gb|EDW69727.1| GJ11957 [Drosophila virilis]
Length = 415
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/395 (60%), Positives = 293/395 (74%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++++ T ++ + EYV+KAQILAGGRG G FDNGFK GVH T+N D+ + ++MI
Sbjct: 47 LDNSKDDTQAVQSFDCDEYVVKAQILAGGRGKGIFDNGFKGGVHITSNKSDVLSLSKQMI 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+SVNITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 107 GNRLITKQTPKSGILVNKVMVARSVNITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+TP +KT+P+ +++ I E++ ++A FLEF+GD + A E+QK
Sbjct: 167 AETPEKIKTVPLSINKPIPEAVLLEVAKFLEFKGDTVQRCADEIQK-------------- 212
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINPL ETD EVISVDAK+NFDDNAEF
Sbjct: 213 -------------------LYTLFKAVDAVQIEINPLAETDNGEVISVDAKLNFDDNAEF 253
Query: 270 RQKNIFSQNEVSE-SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IF+ + E +DPREV+ASKYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 254 RQKDIFALDTHEEDADPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 313
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV E+ + +AF I++SD VK ILVNVFGGIVNCATIA G+V A K KL++
Sbjct: 314 ANFLDVGGGVQEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNV 373
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 374 PLVVRLEGTNVTKAREILKNSGLPIQTASDLDDAA 408
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K KL++PLVVRLEGTNV + + IL S LP+ ASDLD+AA + A
Sbjct: 359 ANGIVAASKKLKLNVPLVVRLEGTNVTKAREILKNSGLPIQTASDLDDAAQKAVAA 414
>gi|195491992|ref|XP_002093802.1| GE20552 [Drosophila yakuba]
gi|194179903|gb|EDW93514.1| GE20552 [Drosophila yakuba]
Length = 416
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/395 (59%), Positives = 291/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++++ ++K EYV+KAQILAGGRG G FDNGFK GVH T+N ++ + ++MI
Sbjct: 47 LDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITSNKSEVLSLTQQMI 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+S+NITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 107 GNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP +KT+P+D+ + I ES ++A FLEF+GD + A E+QKL
Sbjct: 167 EETPEKIKTVPLDIDKPIPESTLLEVAKFLEFKGDSVKRCAEEIQKL------------- 213
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+ LF SVDA Q+EINPL ETD+ EVISVDAK+NFDDNA+F
Sbjct: 214 --------------------YTLFKSVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQF 253
Query: 270 RQKNIFSQNEV-SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IFS + ESDPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 254 RQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 313
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV E+ + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K +L++
Sbjct: 314 ANFLDVGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNV 373
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 374 PLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAA 408
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K +L++PLVVRLEGTNV + + IL S LP+ ASDLD+AA+ + A
Sbjct: 359 ANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAA 414
>gi|312374636|gb|EFR22149.1| hypothetical protein AND_15704 [Anopheles darlingi]
Length = 404
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/392 (58%), Positives = 286/392 (72%), Gaps = 33/392 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+ + ++LKD N EYVIKAQILAGGRG GHFDNGFK GVH T + + P++EKM+GH
Sbjct: 39 EGKQDADVLKDFNVNEYVIKAQILAGGRGKGHFDNGFKGGVHITKDRSQVIPLVEKMVGH 98
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
+LITKQTPK GI V KVMVA S+NI RETY IV DR HNGPV+I SP+GG DIE VA +
Sbjct: 99 RLITKQTPKDGILVKKVMVADSINIVRETYLSIVMDRQHNGPVLIASPAGGMDIEAVAEE 158
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP +KT+PID+ GIT + ++A FLEF+G L +AA ++ K
Sbjct: 159 TPDKIKTLPIDITAGITREQSLEVARFLEFRGPLLERAADQIVK---------------- 202
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
L++LF VDA Q+EINPL ETD+ VISVDAK+NF+DNA+FRQ
Sbjct: 203 -----------------LYHLFTKVDAVQIEINPLAETDDGRVISVDAKLNFEDNAQFRQ 245
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K+IF+ ++DP+E++ASKYNLNY+ M+GNIGCLVNGAGLAMATMDIIKL+GG PANF
Sbjct: 246 KDIFAMEVHEDTDPKEIEASKYNLNYIAMEGNIGCLVNGAGLAMATMDIIKLNGGSPANF 305
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGG V E+ +++AF+I++SD NVK ILVNVFGGIVNCATIA G+V+A KS L +PL+
Sbjct: 306 LDVGGNVKEDQVLKAFQILTSDENVKAILVNVFGGIVNCATIANGIVSATKSMNLKVPLI 365
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VRLEGTNV K+IL++S L + A DLDEAA
Sbjct: 366 VRLEGTNVTAAKKILEQSGLKIQSAVDLDEAA 397
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V+A KS L +PL+VRLEGTNV K+IL++S L + A DLDEAA
Sbjct: 348 ANGIVSATKSMNLKVPLIVRLEGTNVTAAKKILEQSGLKIQSAVDLDEAA 397
>gi|195587980|ref|XP_002083739.1| GD13190 [Drosophila simulans]
gi|194195748|gb|EDX09324.1| GD13190 [Drosophila simulans]
Length = 416
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/395 (59%), Positives = 290/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++++ ++K EYV+KAQILAGGRG G FDNGFK GVH T N ++ + ++MI
Sbjct: 47 LDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITTNKSEVLSLTQQMI 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+S+NITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 107 GNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP +KT+P+D+ + I ES ++A FLEF+GD + A E+QK
Sbjct: 167 EETPEKIKTVPLDIDKPIPESTLLEVAKFLEFKGDSVKRCAEEIQK-------------- 212
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINPL ETD+ EVISVDAK+NFDDNA+F
Sbjct: 213 -------------------LYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQF 253
Query: 270 RQKNIFSQNEV-SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IFS + ESDPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 254 RQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 313
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV E+ + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K +L++
Sbjct: 314 ANFLDVGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNV 373
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 374 PLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAA 408
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K +L++PLVVRLEGTNV + + IL S LP+ ASDLD+AA+ + A
Sbjct: 359 ANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAA 414
>gi|195427883|ref|XP_002062006.1| GK17298 [Drosophila willistoni]
gi|194158091|gb|EDW72992.1| GK17298 [Drosophila willistoni]
Length = 416
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/395 (60%), Positives = 290/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++++ ++K + EYV+KAQILAGGRG G FDNGFK GVH T+N ++ + ++MI
Sbjct: 47 LDNSKADAELVKKFDCPEYVVKAQILAGGRGKGTFDNGFKGGVHITSNKSEVLSLSQQMI 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+SVNITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 107 GNRLITKQTPKSGILVNKVMVARSVNITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP + TIP+D+ + I+ES +A FLEF+GD + A E+QKL
Sbjct: 167 EETPEKILTIPLDIGKPISESTLIKVAKFLEFKGDAIKRCADEIQKL------------- 213
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+ LF SVDA Q+EINPL ETD+ EVISVDAK+NFDDNA+F
Sbjct: 214 --------------------YTLFKSVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQF 253
Query: 270 RQKNIFSQN-EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IF + ESDPREV+ASKYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 254 RQKDIFDLDITEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 313
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV E+ + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K KLS+
Sbjct: 314 ANFLDVGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLSV 373
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ A+DLD+AA
Sbjct: 374 PLVVRLEGTNVTKAREILKNSGLPIQTAADLDDAA 408
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K KLS+PLVVRLEGTNV + + IL S LP+ A+DLD+AA+ + A
Sbjct: 359 ANGIVAASKKLKLSVPLVVRLEGTNVTKAREILKNSGLPIQTAADLDDAAHKAVAA 414
>gi|194867056|ref|XP_001971996.1| GG14126 [Drosophila erecta]
gi|190653779|gb|EDV51022.1| GG14126 [Drosophila erecta]
Length = 416
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/395 (59%), Positives = 290/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++++ ++K EYV+KAQILAGGRG G FDNGFK GVH T+N ++ + ++MI
Sbjct: 47 LDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITSNKSEVLSLTQQMI 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+S+NITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 107 GNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP +KT+P+D+ + I ES ++A FLEF+GD + A E+QK
Sbjct: 167 EETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEEIQK-------------- 212
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINPL ETD EVISVDAK+NFDDNA+F
Sbjct: 213 -------------------LYTLFKAVDAVQIEINPLAETDNGEVISVDAKLNFDDNAQF 253
Query: 270 RQKNIFSQNEV-SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IFS + ESDPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 254 RQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 313
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV E+ + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K +L++
Sbjct: 314 ANFLDVGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNV 373
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 374 PLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAA 408
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K +L++PLVVRLEGTNV + + IL S LP+ ASDLD+AA+ + A
Sbjct: 359 ANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAA 414
>gi|156548216|ref|XP_001608018.1| PREDICTED: probable succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Nasonia vitripennis]
Length = 441
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 230/395 (58%), Positives = 292/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++D + N L+ L+ +EYV+KAQ+LAGGRG G FDNGFK GV T + + + ++ M+
Sbjct: 55 VDDLQKTPNALETLHAEEYVVKAQVLAGGRGKGWFDNGFKGGVKITKDKKAVAEYVKSML 114
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQT K GI V K+M+A+SV+ITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 115 GHRLITKQTSKDGILVQKIMIAESVDITRETYVCILMDRSHNGPVLIASPAGGMDIEAVA 174
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
KTP +KTIP+D++ GI + +A+++A+
Sbjct: 175 EKTPEQIKTIPLDIYTGIDDEIAKEVAE-------------------------------- 202
Query: 210 DFLEFRGD-LKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
FL F+ + LK KA E++ LW LF+ +DA Q+EINPLVET + EV++VDAKI+FDDNAE
Sbjct: 203 -FLGFKEEKLKQKAVYELKNLWKLFVDIDALQVEINPLVETKDGEVVAVDAKISFDDNAE 261
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQK+IF + SE DPREVDASK+NLNY+GMDGNIGCLVNGAGLAMATMDIIKL+GG P
Sbjct: 262 FRQKDIFDLEDTSEKDPREVDASKFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGTP 321
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGG V E+ + QAFRI++ D V+ ILVNVFGGIVNCATIAKG+V+A ++ L I
Sbjct: 322 ANFLDVGGSVKEDQVYQAFRILTEDPKVQSILVNVFGGIVNCATIAKGIVSAARNLGLKI 381
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV E K+I+ ES LP++ A+DLDEAA
Sbjct: 382 PLVVRLEGTNVNEAKKIIAESGLPILTANDLDEAA 416
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 39/50 (78%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V+A ++ L IPLVVRLEGTNV E K+I+ ES LP++ A+DLDEAA
Sbjct: 367 AKGIVSAARNLGLKIPLVVRLEGTNVNEAKKIIAESGLPILTANDLDEAA 416
>gi|21356231|ref|NP_651963.1| sucb [Drosophila melanogaster]
gi|6634118|emb|CAB64384.1| putative succinyl-coa ligase (GDP-forming) beta-chain precursor
[Drosophila melanogaster]
gi|7295455|gb|AAF50771.1| sucb [Drosophila melanogaster]
gi|15292271|gb|AAK93404.1| LD44970p [Drosophila melanogaster]
gi|220946348|gb|ACL85717.1| Sucb-PA [synthetic construct]
gi|220956042|gb|ACL90564.1| Sucb-PA [synthetic construct]
Length = 416
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/395 (59%), Positives = 289/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L +++ ++K EYV+KAQILAGGRG G FDNGFK GVH T N ++ + ++MI
Sbjct: 47 LNNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITTNKSEVLSLTQQMI 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+S+NITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 107 GNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP +KT+P+D+ + I ES ++A FLEF+GD + A E+QK
Sbjct: 167 EETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEEIQK-------------- 212
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINPL ETD+ EVISVDAK+NFDDNA+F
Sbjct: 213 -------------------LYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQF 253
Query: 270 RQKNIFSQNEV-SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IFS + ESDPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 254 RQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 313
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV E+ + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K +L++
Sbjct: 314 ANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNV 373
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 374 PLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAA 408
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K +L++PLVVRLEGTNV + + IL S LP+ ASDLD+AA+ + A
Sbjct: 359 ANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAA 414
>gi|195337663|ref|XP_002035448.1| GM13912 [Drosophila sechellia]
gi|194128541|gb|EDW50584.1| GM13912 [Drosophila sechellia]
Length = 416
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/395 (58%), Positives = 290/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++++ ++K EYV+KAQILAGGRG G FDNGFK GVH T N ++ + ++MI
Sbjct: 47 LDNSKADAEVVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITTNKSEVLSLTQQMI 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+S+NITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 107 GNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP +KT+P+D+ + I ES ++A FLEF+GD + A E+QK
Sbjct: 167 EETPDKIKTVPLDIDKPIPESTLLEVAKFLEFKGDSVKRCAEEIQK-------------- 212
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINPL ETD+ EVISVDAK+NFDDNA+F
Sbjct: 213 -------------------LYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQF 253
Query: 270 RQKNIFSQNEV-SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IFS + ESDPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 254 RQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 313
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV E+ + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K +L++
Sbjct: 314 ANFLDVGGGVKEDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQLNV 373
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ A+DLD+AA
Sbjct: 374 PLVVRLEGTNVNQAREILKNSGLPIQTATDLDDAA 408
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K +L++PLVVRLEGTNV + + IL S LP+ A+DLD+AA+ + A
Sbjct: 359 ANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTATDLDDAAHKAVAA 414
>gi|125979431|ref|XP_001353748.1| GA10444 [Drosophila pseudoobscura pseudoobscura]
gi|54640731|gb|EAL29482.1| GA10444 [Drosophila pseudoobscura pseudoobscura]
Length = 422
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/395 (59%), Positives = 289/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L+++ + I+K EYV+KAQILAGGRG G FDNGFK GVH T+N D+ + ++MI
Sbjct: 53 LDNSNSDAEIVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITSNKSDVLSLSKQMI 112
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQTPK+GI VNKVMVA+SVNITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 113 GHRLITKQTPKSGILVNKVMVARSVNITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 172
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP + T+P+D+ + I E+ +A FLEF+GD + A E+QK
Sbjct: 173 EETPEKLLTVPLDIGKPIPEATLIKVAKFLEFKGDTVQRCAEEIQK-------------- 218
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINPL ETD+ EVISVDAK+NFDDNA+F
Sbjct: 219 -------------------LYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQF 259
Query: 270 RQKNIFSQN-EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IF+ + E+DPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDII+L+GG P
Sbjct: 260 RQKDIFAMDITEEEADPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIQLNGGSP 319
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGVNE + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K KL++
Sbjct: 320 ANFLDVGGGVNEAQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNV 379
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV++ + IL S LP+ ASDLD+AA
Sbjct: 380 PLVVRLEGTNVEKAREILKNSGLPIQTASDLDDAA 414
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K KL++PLVVRLEGTNV++ + IL S LP+ ASDLD+AA + A
Sbjct: 365 ANGIVAASKKLKLNVPLVVRLEGTNVEKAREILKNSGLPIQTASDLDDAAQKSVAA 420
>gi|194750237|ref|XP_001957534.1| GF10458 [Drosophila ananassae]
gi|190624816|gb|EDV40340.1| GF10458 [Drosophila ananassae]
Length = 416
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/395 (59%), Positives = 290/395 (73%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++++ +++K EYV+KAQILAGGRG G FDNGFK GVH T++ ++ + KMI
Sbjct: 47 LDNSKADADVVKSFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITSDKSEVLSLSHKMI 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+SVNITRETY CI+ DR H GPV+I SP+GG DIE VA
Sbjct: 107 GNRLITKQTPKSGILVNKVMVARSVNITRETYLCILLDREHMGPVLIASPAGGMDIEAVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP +KT+P+++ + I E+ ++A FLEF+GD + A E+QK
Sbjct: 167 EETPEKIKTVPLNIDKPIPEATLIEVAKFLEFKGDAVKRCADEIQK-------------- 212
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINPL ETD+ EVISVDAK+NFDDNA+F
Sbjct: 213 -------------------LYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQF 253
Query: 270 RQKNIFSQN-EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IF+ + ESDPREV+ASKYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GGEP
Sbjct: 254 RQKDIFNMDITEEESDPREVEASKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGGEP 313
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV E+ + +AF I++SD VK ILVNVFGGIVNCATIA G+V A K KL++
Sbjct: 314 ANFLDVGGGVKEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNV 373
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 374 PLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAA 408
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K KL++PLVVRLEGTNV + + IL S LP+ ASDLD+AA+ + A
Sbjct: 359 ANGIVAASKKLKLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAA 414
>gi|195169087|ref|XP_002025359.1| GL12039 [Drosophila persimilis]
gi|194108827|gb|EDW30870.1| GL12039 [Drosophila persimilis]
Length = 422
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/395 (58%), Positives = 287/395 (72%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L+++ + I+K EYV+KAQILAGGRG G FDNGFK GVH T+N D+ + ++MI
Sbjct: 53 LDNSNSDAEIVKTFECPEYVVKAQILAGGRGKGTFDNGFKGGVHITSNKSDVLSLSKQMI 112
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQTPK+GI VNKVMVA+SVNITRETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 113 GHRLITKQTPKSGILVNKVMVARSVNITRETYLCILLDREHNGPVLIASPAGGMDIEAVA 172
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP + T+P+D+ + I E+ +A FLEF+GD + A E+QK
Sbjct: 173 EETPEKLLTVPLDIGKPIPEATLIKVAKFLEFKGDTVQRCAEEIQK-------------- 218
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ F +VDA Q+EINPL ETD+ EVISVDAK+NFDDNA+F
Sbjct: 219 -------------------LYTFFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNAQF 259
Query: 270 RQKNIFSQN-EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IF+ + E+DPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDII+L+GG P
Sbjct: 260 RQKDIFAMDITEEEADPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIQLNGGSP 319
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGVNE + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K KL++
Sbjct: 320 ANFLDVGGGVNEAQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNV 379
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 380 PLVVRLEGTNVDKAREILKNSGLPIQTASDLDDAA 414
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K KL++PLVVRLEGTNV + + IL S LP+ ASDLD+AA + A
Sbjct: 365 ANGIVAASKKLKLNVPLVVRLEGTNVDKAREILKNSGLPIQTASDLDDAAQKSVAA 420
>gi|350420740|ref|XP_003492608.1| PREDICTED: contactin-like [Bombus impatiens]
Length = 1813
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/402 (56%), Positives = 291/402 (72%), Gaps = 32/402 (7%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++D A + L+ ++ EYVIKAQ+LAGGRG G FDNGFK GVH T + + + ++ M+
Sbjct: 1272 VDDLTKANSALQKISADEYVIKAQVLAGGRGKGWFDNGFKGGVHLTKDHKAVIDVVRNML 1331
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQT K GI V K+M+A+SVNI RETY CI+ DR HNGPV+I SPSGG DIE VA
Sbjct: 1332 GHRLITKQTSKDGILVQKIMIAESVNIARETYICILMDRQHNGPVLIASPSGGMDIETVA 1391
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
K P L+KT+P+D++ GI + +A+D++ FL F +E+Q+
Sbjct: 1392 EKNPELIKTVPLDIYYGIDDEIAKDVSIFLGF-------VDSEIQQ-------------- 1430
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
KA E++ LW LF+ +DA Q+EINPLVET +++VI+VDAKI FDDNAEF
Sbjct: 1431 -----------KAIFELKNLWKLFVDIDALQVEINPLVETTDKQVIAVDAKIAFDDNAEF 1479
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ+++F+ + DPRE DAS++NLNY+GMDGNIGCLVNGAGLAMATMDIIKL+GG PA
Sbjct: 1480 RQQDLFALEDSDTKDPREADASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPA 1539
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGG V E+ + QAFRI+S D VK ILVNVFGGIVNCATIAKG++ A + KL IP
Sbjct: 1540 NFLDVGGSVKEDQVYQAFRILSEDPKVKAILVNVFGGIVNCATIAKGIIAASHNLKLKIP 1599
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKS 431
LVVRLEGTNV E K++L ESKL ++ A+DLDEAA + KS
Sbjct: 1600 LVVRLEGTNVTEAKKLLAESKLSIVTANDLDEAAKKAVSSKS 1641
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + KL IPLVVRLEGTNV E K++L ESKL ++ A+DLDEAA
Sbjct: 1584 AKGIIAASHNLKLKIPLVVRLEGTNVTEAKKLLAESKLSIVTANDLDEAA 1633
>gi|340724306|ref|XP_003400523.1| PREDICTED: contactin-like [Bombus terrestris]
Length = 1642
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/394 (57%), Positives = 288/394 (73%), Gaps = 32/394 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++D A + L+ ++ EYVIKAQ+LAGGRG G FDNGFK GVH T + + + ++ M+
Sbjct: 1272 VDDLTKANSALQKISADEYVIKAQVLAGGRGKGWFDNGFKGGVHLTKDHKAVIDVVRNML 1331
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQT K GI V K+M+A+SVNI RETY CI+ DR HNGPV+I SPSGG DIE VA
Sbjct: 1332 GHRLITKQTSKDGILVQKIMIAESVNIARETYICILMDRQHNGPVLIASPSGGMDIETVA 1391
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
K P L+KT+P+D++ GI + +A+D++ FL F +E+Q+
Sbjct: 1392 EKNPELIKTVPLDIYYGIDDEIAKDVSIFLGF-------VDSEIQQ-------------- 1430
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
KA E++ LW LF+ +DA Q+EINPLVET +++VI+VDAKI FDDNAEF
Sbjct: 1431 -----------KAIFELKNLWKLFVDIDALQVEINPLVETTDKQVIAVDAKIAFDDNAEF 1479
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ+++F+ + DPRE DAS++NLNY+GMDGNIGCLVNGAGLAMATMDIIKL+GG PA
Sbjct: 1480 RQQDLFALEDSGTKDPREADASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSPA 1539
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGG V E+ + QAFRI+S D VK ILVNVFGGIVNCATIAKG++ A + KL IP
Sbjct: 1540 NFLDVGGSVKEDQVYQAFRILSEDPKVKAILVNVFGGIVNCATIAKGIIAASHNLKLKIP 1599
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LVVRLEGTNV E K++L ESKL ++ A+DLDEAA
Sbjct: 1600 LVVRLEGTNVTEAKKLLAESKLSIVTANDLDEAA 1633
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + KL IPLVVRLEGTNV E K++L ESKL ++ A+DLDEAA
Sbjct: 1584 AKGIIAASHNLKLKIPLVVRLEGTNVTEAKKLLAESKLSIVTANDLDEAA 1633
>gi|289741223|gb|ADD19359.1| GTP-specific succinyl-CoA synthetase beta subunit [Glossina
morsitans morsitans]
Length = 414
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/403 (58%), Positives = 289/403 (71%), Gaps = 35/403 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L+ + +L+ + EYV+KAQILAGGRG G FDNGFK GVH T + +++ + +KMI
Sbjct: 45 LDSSNNDKTVLEKFDCPEYVVKAQILAGGRGKGVFDNGFKGGVHITTSKEEVLNLSKKMI 104
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI V KVMVA+SVNI RETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 105 GNRLITKQTPKSGITVKKVMVARSVNIVRETYLCILLDREHNGPVLIASPAGGVDIETVA 164
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP +KT+P+++ Q I E ++A FL+F+G A E+QK
Sbjct: 165 EETPEKIKTVPLNIDQPIPEQTLMEVAKFLDFKGAAIKTCAAEIQK-------------- 210
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINP ETD+ EVISVDAK+NFDDNAEF
Sbjct: 211 -------------------LYTLFKAVDAVQIEINPFAETDKGEVISVDAKLNFDDNAEF 251
Query: 270 RQKNIFSQN-EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK IFS + ESD REV+A+KYNLNYVGMDGNIGCLVNGAGLAMATMDIIKL+GG+P
Sbjct: 252 RQKEIFSMDISEEESDHREVEATKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLNGGDP 311
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGGV EE +++AF+I++SD VK ILVNVFGGIVNCATIA G+V A K L++
Sbjct: 312 ANFLDVGGGVKEEQVLKAFQILTSDPKVKSILVNVFGGIVNCATIANGVVTASKVLNLNV 371
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACK 430
PLVVRLEGTNV E ++IL +S L + ASDLD+AA VNA +
Sbjct: 372 PLVVRLEGTNVTEARKILKDSGLAIQTASDLDDAAQKAVNALQ 414
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K L++PLVVRLEGTNV E ++IL +S L + ASDLD+AA
Sbjct: 357 ANGVVTASKVLNLNVPLVVRLEGTNVTEARKILKDSGLAIQTASDLDDAA 406
>gi|307210402|gb|EFN86967.1| Contactin [Harpegnathos saltator]
Length = 1647
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/401 (56%), Positives = 288/401 (71%), Gaps = 33/401 (8%)
Query: 24 STDKVCLEDARTATN-ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIP 82
S + D T TN L+ L+ EYVIKAQILAGGRG G FDNGFK GVH T + +
Sbjct: 1270 SVQNFAIVDDLTKTNSALEKLHEGEYVIKAQILAGGRGKGWFDNGFKGGVHLTRDRNAVS 1329
Query: 83 PILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGG 142
++ M+GH+LITKQT K GI V K+M+A+SV+I RETY CI+ DR HNGPV+I SP+GG
Sbjct: 1330 NYVKNMLGHRLITKQTSKDGIPVQKIMIAESVDIARETYVCILMDRAHNGPVLIASPAGG 1389
Query: 143 TDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLS 202
DIE VA K P +KT+P+D++ GI +++A+D++ FL F
Sbjct: 1390 MDIETVAEKNPEQIKTVPLDIYYGINDAIAKDVSIFLGFTDP------------------ 1431
Query: 203 SLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKIN 262
D+ KA E++ LW LF+ +DA Q+EINPLVET +++VI+VDAKI
Sbjct: 1432 --------------DILDKAIYELKNLWKLFVDIDALQVEINPLVETKDKQVIAVDAKIA 1477
Query: 263 FDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIK 322
FDDNA+FRQ+++F+ +V+E DPREVDAS++NLNY+GMDGNIGCLVNGAGLAMATMDIIK
Sbjct: 1478 FDDNAQFRQQDLFALEDVTEKDPREVDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIK 1537
Query: 323 LHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACK 382
L+GG PANFLDVGG V E+ + QAFRI+S D VK I VNVFGGIVNCATIAKG++ A +
Sbjct: 1538 LNGGSPANFLDVGGNVKEDQVFQAFRILSEDPKVKAIFVNVFGGIVNCATIAKGIIAASR 1597
Query: 383 SFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+ L IPLVVRLEGTNV E K++L ES LP++ A++LDEAA
Sbjct: 1598 NLGLQIPLVVRLEGTNVTEAKKVLAESGLPILTANNLDEAA 1638
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A ++ L IPLVVRLEGTNV E K++L ES LP++ A++LDEAA
Sbjct: 1589 AKGIIAASRNLGLQIPLVVRLEGTNVTEAKKVLAESGLPILTANNLDEAA 1638
>gi|290561006|gb|ADD37905.1| Succinyl-CoA ligase subunit beta, mitochondrial [Lepeophtheirus
salmonis]
Length = 418
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/393 (57%), Positives = 279/393 (70%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ A I K EYVIKAQILAGGRG G FDNGFK GVH T + + + + M+G
Sbjct: 50 ENDAEAIAIPKKFPCDEYVIKAQILAGGRGKGIFDNGFKGGVHLTKDKRQVASLCSNMLG 109
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
H LITKQTP TGI V+KVMVA++++I RETYFCI+ DR +NGPV++ SP GG DIE+VA
Sbjct: 110 HSLITKQTPPTGIPVSKVMVAEAIDIKRETYFCILLDREYNGPVIVASPDGGVDIEDVAE 169
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP +K IPI + G T +AQD+A
Sbjct: 170 RTPERIKKIPISISTGCTHEIAQDVAA--------------------------------- 196
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
FL F G+LK + A +++ L+++F+ VD QLE+NPL ET + + + DAK+ FDDNAEFR
Sbjct: 197 FLGFEGELKEQCAGQIKNLYDMFIKVDCVQLEVNPLAETTDGMIYTADAKLGFDDNAEFR 256
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QKNIF + +E DPREV+A+ +NLNYV MDGNIGCLVNGAGLAMATMDIIKL+GG+PAN
Sbjct: 257 QKNIFKMEDTTEMDPREVEAAAHNLNYVQMDGNIGCLVNGAGLAMATMDIIKLYGGDPAN 316
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGG V EE + +AFRII+ DS VK ILVNVFGGIVNCATIA G+VNACKS L++PL
Sbjct: 317 FLDVGGSVQEEQVKEAFRIITEDSKVKAILVNVFGGIVNCATIANGVVNACKSINLNLPL 376
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRLEGTNV+ K+IL+ES LP+ A+DLD+AA
Sbjct: 377 VVRLEGTNVEAAKKILEESGLPIQSAADLDDAA 409
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +VNACKS L++PLVVRLEGTNV+ K+IL+ES LP+ A+DLD+AA + A
Sbjct: 360 ANGVVNACKSINLNLPLVVRLEGTNVEAAKKILEESGLPIQSAADLDDAAKKAVKA 415
>gi|195014872|ref|XP_001984094.1| GH16246 [Drosophila grimshawi]
gi|193897576|gb|EDV96442.1| GH16246 [Drosophila grimshawi]
Length = 420
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/391 (58%), Positives = 282/391 (72%), Gaps = 34/391 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++ + +++ + EYV+KAQILAGGRG G FDNGFK GVH T+N D+ + ++MI
Sbjct: 52 LDNTSSDKQVVQSFDCPEYVVKAQILAGGRGKGTFDNGFKGGVHITSNKGDVLSLSKQMI 111
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G++LITKQTPK+GI VNKVMVA+SVNITRETY C + DR HNGPV+I SP+GG DIE VA
Sbjct: 112 GNRLITKQTPKSGILVNKVMVARSVNITRETYICFLLDREHNGPVLIASPAGGMDIEAVA 171
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP +KT+P+D+ + I E+ ++A FLEF+GD + A E+QK
Sbjct: 172 QETPEKIKTVPLDIGKPIPEATLLEVARFLEFKGDAVKRCADEIQK-------------- 217
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ LF +VDA Q+EINPL ETD EVISVDAK+NFDDNA+F
Sbjct: 218 -------------------LYTLFKAVDALQIEINPLAETDSGEVISVDAKLNFDDNAQF 258
Query: 270 RQKNIFSQNEV-SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
RQK+IF+ + E+DPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDIIKL GGEP
Sbjct: 259 RQKDIFAMDVTEEEADPREVEANKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLRGGEP 318
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGG V E+ + +AF I++SD VK ILVNVFGGIVNCATIA G+V A K KL++
Sbjct: 319 ANFLDVGGSVKEDQVAKAFEILTSDPKVKGILVNVFGGIVNCATIANGIVAASKKLKLNV 378
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDL 419
PLVVRLEGTNV + + IL S LP+ A DL
Sbjct: 379 PLVVRLEGTNVTKAREILKNSGLPIQTACDL 409
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 515
A +V A K KL++PLVVRLEGTNV + + IL S LP+ A DL
Sbjct: 364 ANGIVAASKKLKLNVPLVVRLEGTNVTKAREILKNSGLPIQTACDL 409
>gi|383858130|ref|XP_003704555.1| PREDICTED: probable succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Megachile rotundata]
Length = 424
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/394 (56%), Positives = 283/394 (71%), Gaps = 32/394 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++D + L L+ EYVIKAQ+LAGGRG G F+NGFK GVH T + + + I++ M+
Sbjct: 54 VDDLSKTNSALDKLHADEYVIKAQVLAGGRGKGWFNNGFKGGVHVTKDRKAVIDIVKNML 113
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQT K GI V KVM+A SVNI RETY CI+ DR HNGPV+I SP GG DIE VA
Sbjct: 114 GHRLITKQTTKDGILVQKVMIADSVNIARETYVCILLDRQHNGPVLIASPEGGMDIETVA 173
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP L+KTIP+D+++GI +++A+DI+ FL F
Sbjct: 174 EQTPELIKTIPLDIYEGIDDNIAKDISIFLGFTDPT------------------------ 209
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
++ KA E++ LW LF+ +DA QLEINPLVET +++VI+VDAKI FDDNA F
Sbjct: 210 --------MQQKAMQELKNLWKLFVDIDALQLEINPLVETTDKQVIAVDAKIAFDDNARF 261
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ+++F+ + DPREV AS++NLNY+ MDGNIGCLVNGAGLAMATMDIIKLHGG PA
Sbjct: 262 RQEHLFALDNDDTKDPREVAASRFNLNYIAMDGNIGCLVNGAGLAMATMDIIKLHGGSPA 321
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGG V E+ + QAF+I+S D VK ILVNVFGGIVNCATIAKG++ A ++ +L +P
Sbjct: 322 NFLDVGGSVKEDQVFQAFKILSEDPKVKVILVNVFGGIVNCATIAKGIIAASRNLQLKVP 381
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LVVRLEGTNV E K+++ ES + ++ A+DLDEAA
Sbjct: 382 LVVRLEGTNVTEAKKLIAESDMSILTANDLDEAA 415
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A ++ +L +PLVVRLEGTNV E K+++ ES + ++ A+DLDEAA
Sbjct: 366 AKGIIAASRNLQLKVPLVVRLEGTNVTEAKKLIAESDMSILTANDLDEAA 415
>gi|307183642|gb|EFN70345.1| Probable succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Camponotus floridanus]
Length = 421
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/395 (55%), Positives = 282/395 (71%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++D + L+ L+ E+VIKAQ+LAGGRG G FDNGFK GVH T + + ++ M+
Sbjct: 51 VDDLSKTNSALEKLHADEFVIKAQVLAGGRGKGWFDNGFKGGVHLTKDRNAVSNYVKNML 110
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQT K GI V K+M+A+SV+I ETY CI+ DR +NGPV+I SP+GG DIE VA
Sbjct: 111 GHRLITKQTSKDGILVQKIMIAESVDIAYETYICILMDRQYNGPVLIASPAGGMDIETVA 170
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQG-DLKAKAATEVQKLWNLFLSSLAQKI 208
K P +KT+P+D++ GI + +AQD+ FL F D+ KA E++ LW
Sbjct: 171 EKYPEKIKTVPLDIYYGIDDEIAQDVCTFLGFSDPDVLNKAIYELKNLW----------- 219
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
LF+ +DA Q+EINPLVET +++VI+VDAKI FDDNA+
Sbjct: 220 ----------------------KLFVDIDALQIEINPLVETTDKQVIAVDAKIAFDDNAQ 257
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQ+ +F+ +VSE DPREVDAS+YNLNY+GMDGNIGCLVNGAGLAMATMDIIKL+GG P
Sbjct: 258 FRQQTLFALEDVSEKDPREVDASRYNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSP 317
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGG V E+ + QAFRI+S D VK ILVNVFGGIVNC TIA+G++ A ++ L I
Sbjct: 318 ANFLDVGGSVREDQVFQAFRILSEDPKVKAILVNVFGGIVNCITIARGIIAASQNLGLQI 377
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV E K++L ES LP++ A++LDEAA
Sbjct: 378 PLVVRLEGTNVTEAKKVLAESGLPILTANNLDEAA 412
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A ++ L IPLVVRLEGTNV E K++L ES LP++ A++LDEAA
Sbjct: 363 ARGIIAASQNLGLQIPLVVRLEGTNVTEAKKVLAESGLPILTANNLDEAA 412
>gi|242007846|ref|XP_002424730.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
corporis]
gi|212508223|gb|EEB11992.1| succinate-CoA ligase, beta subunit, putative [Pediculus humanus
corporis]
Length = 372
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/384 (57%), Positives = 278/384 (72%), Gaps = 33/384 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + KDL +EYV+KAQILAGGRG+G F NGFK GVH T N ++ ++++M+G+KLIT
Sbjct: 9 ADKVAKDLRVEEYVVKAQILAGGRGVGVFSNGFKGGVHLTKNPSEVGNLVKQMLGNKLIT 68
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQTPK GI VNKVMVA+SV+I +ETYF I+ DR HNGPVV++S GG DIENVA K P
Sbjct: 69 KQTPKDGILVNKVMVAESVDIQKETYFSILMDRTHNGPVVVVSAEGGVDIENVAEKNPEA 128
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+K IPID+ +G+T+ +A A+FL+F G K KA +E++KLW
Sbjct: 129 IKIIPIDIFKGLTDDIAVQAAEFLKFTGVSKEKAVSEMKKLW------------------ 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
FL VDATQ+EINPL E+ + +V++VDAKINFDDNA++RQK+IF
Sbjct: 171 ---------------KFFLDVDATQVEINPLAESSKNDVVAVDAKINFDDNAQYRQKDIF 215
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+E DPRE+ AS++NLNY+ ++GNIGCLVNGAGLAMATMDIIKL GGEPANFLDVG
Sbjct: 216 EMENKTEIDPRELLASQFNLNYIPLEGNIGCLVNGAGLAMATMDIIKLEGGEPANFLDVG 275
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G VNE + +AF++++ D+ VK ILVNVFGGIVNCATIAKG+V ACK + P+VVRLE
Sbjct: 276 GNVNENQVTEAFKLLTYDNKVKAILVNVFGGIVNCATIAKGIVAACKKINVKTPIVVRLE 335
Query: 396 GTNVQEGKRILDESKLPLIFASDL 419
GTNV E K+IL+ S LP+I A L
Sbjct: 336 GTNVNEAKKILENSGLPIINAKGL 359
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 515
A +V ACK + P+VVRLEGTNV E K+IL+ S LP+I A L
Sbjct: 314 AKGIVAACKKINVKTPIVVRLEGTNVNEAKKILENSGLPIINAKGL 359
>gi|427789653|gb|JAA60278.1| Putative succinyl-coa synthetase beta subunit [Rhipicephalus
pulchellus]
Length = 423
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/388 (55%), Positives = 280/388 (72%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I + L+ E+VIKAQILAGGRG G F +G + GV T + +P ++EKM+G+KL+T
Sbjct: 60 AQEIARTLDVAEFVIKAQILAGGRGKGTFSSGLRGGVKLTKDPAQVPELVEKMLGYKLVT 119
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQTPK G+ VNKVM+A++++I RETY I+ DR +NGPVV+ SP+GG DIE+VA KTPHL
Sbjct: 120 KQTPKDGVLVNKVMIAEALDIARETYLAILMDRSYNGPVVVASPAGGVDIEDVAEKTPHL 179
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PI + +GIT + AQ+IA L F+
Sbjct: 180 IFKEPISILEGITRTQAQNIAKNLN---------------------------------FK 206
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G L KAA ++++L+NLFL VDATQ+E+NP ET + V+ DAKINFDDNA FRQ++IF
Sbjct: 207 GPLLDKAAEQIERLYNLFLKVDATQVEVNPFGETPDGRVVCFDAKINFDDNAAFRQQDIF 266
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+Q + SESDPREV A+K++LNY+GMDGNI CLVNGAGLAMATMDII+LHGG PANFLDVG
Sbjct: 267 AQEDTSESDPREVLAAKHHLNYIGMDGNIACLVNGAGLAMATMDIIQLHGGTPANFLDVG 326
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G V E+ + QAF+II+ D VK +LVN+FGGIVNCATIA G+ +AC+S L++PLVVRLE
Sbjct: 327 GSVKEDQVTQAFKIITDDPKVKAVLVNIFGGIVNCATIANGITSACRSINLAVPLVVRLE 386
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+E + IL S LP+ A+DL++AA
Sbjct: 387 GTNVEEARSILSSSGLPITTAADLEDAA 414
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + +AC+S L++PLVVRLEGTNV+E + IL S LP+ A+DL++AA
Sbjct: 365 ANGITSACRSINLAVPLVVRLEGTNVEEARSILSSSGLPITTAADLEDAA 414
>gi|332023778|gb|EGI64002.1| Putative succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Acromyrmex echinatior]
Length = 424
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/395 (55%), Positives = 281/395 (71%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
+ED + L+ L+ E+VIKAQ+LAGGRG G FDNGFK GVH T + + ++ M+
Sbjct: 54 VEDLTQMNSALEKLHTDEFVIKAQVLAGGRGKGWFDNGFKGGVHLTKDRNAVANYVKNML 113
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQT K GI V K+M+A+SV+I RETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 114 GHRLITKQTSKDGILVQKIMIAESVDIARETYVCILMDRQHNGPVLIASPAGGMDIEAVA 173
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQG-DLKAKAATEVQKLWNLFLSSLAQKI 208
K P +KT+ +D++ GI + +A+D+ FL F D+ KA E++ LW
Sbjct: 174 EKYPEQIKTVTLDIYHGIDDEIAKDVCVFLGFSDTDILKKAIYELKNLW----------- 222
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
LF+ +DA Q+EINPLVET +++V++VDAKI FDDNA+
Sbjct: 223 ----------------------KLFVDIDALQVEINPLVETTDKQVVAVDAKIAFDDNAQ 260
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQ+++F+ ++SE DPREVDAS++NLNY+GMDGNIGCLVNGAGLAMATMDIIKL+GG P
Sbjct: 261 FRQQDLFALEDISEKDPREVDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSP 320
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLD+GG V E+ + QAFRI+S D VK ILVNVFGGIVNC TIAKG++ A ++ L I
Sbjct: 321 ANFLDIGGNVKEDQVFQAFRILSEDPKVKVILVNVFGGIVNCVTIAKGIIAAAQNLGLKI 380
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P VVRLEGTNV E K++L ES P++ AS+LDEAA
Sbjct: 381 PFVVRLEGTNVTEAKKVLSESGFPILTASNLDEAA 415
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A ++ L IP VVRLEGTNV E K++L ES P++ AS+LDEAA
Sbjct: 366 AKGIIAAAQNLGLKIPFVVRLEGTNVTEAKKVLSESGFPILTASNLDEAA 415
>gi|380021534|ref|XP_003694618.1| PREDICTED: contactin-like [Apis florea]
Length = 1641
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/395 (55%), Positives = 283/395 (71%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++D A + L++L+ EYVIKAQ+LAGGRG G FDNGFK GVH T + + + +++ M+
Sbjct: 1271 VDDLNKANSALQNLHANEYVIKAQVLAGGRGKGWFDNGFKGGVHLTKDRKAVIDVVKNML 1330
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+L TKQT + GI V K+M+A+SVNI RETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 1331 GHRLFTKQTSEDGILVQKIMIAESVNIARETYICIIMDRQHNGPVLIASPAGGVDIETVA 1390
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQG-DLKAKAATEVQKLWNLFLSSLAQKI 208
K P L+KTIP+D++ GI + +A+D++ FL F ++ KA E++ LW
Sbjct: 1391 EKNPELIKTIPLDIYYGIDDEIAKDVSIFLGFMDPTVQQKAIYELKNLW----------- 1439
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
LF+ +DA Q+EINPLV T + +VI+VDAKI+FDDNA+
Sbjct: 1440 ----------------------KLFVDIDALQVEINPLVVTTDNQVIAVDAKISFDDNAQ 1477
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQ+++F+ + DPRE DA +++LNY+GMDGNIGCLVNGAGLAMATMDIIKL+GG P
Sbjct: 1478 FRQQDLFALEDNDTKDPREADALRFDLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSP 1537
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGG V E+ + QAFRI+S D VK ILVNVFGGIVNCATIAKG++ A + +L I
Sbjct: 1538 ANFLDVGGSVKEDQVYQAFRILSEDPKVKVILVNVFGGIVNCATIAKGIIAASHNLRLKI 1597
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLV+RLEGTNV E K++L ES L +I A+DLDEAA
Sbjct: 1598 PLVIRLEGTNVTEAKKLLAESNLSIITANDLDEAA 1632
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + +L IPLV+RLEGTNV E K++L ES L +I A+DLDEAA
Sbjct: 1583 AKGIIAASHNLRLKIPLVIRLEGTNVTEAKKLLAESNLSIITANDLDEAA 1632
>gi|72171322|ref|XP_786521.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 426
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/399 (54%), Positives = 278/399 (69%), Gaps = 33/399 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+DA+ A KDL+ +E V+KAQILAGGRG G F +G K GVH T N D+ P++E+MIG
Sbjct: 59 DDAQQAVQQGKDLDVREIVLKAQILAGGRGKGTFTSGLKGGVHLTKNPNDLGPLVEQMIG 118
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
KL TKQTPK G+ V KVMVA++++I RETY I+ DR GPV+I SP+GG DIE V+
Sbjct: 119 AKLTTKQTPKDGVLVKKVMVAEALDIERETYLAILMDRGMMGPVLIGSPAGGVDIEEVSE 178
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
KTP L+ +PID+ GIT+ A +A
Sbjct: 179 KTPELIYKVPIDITIGITDEQAL---------------------------------TMAK 205
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L+F+GDL AA +++ L+ LFL VDATQ+E+NP ETD+ V+ DAKINFDDNAEFR
Sbjct: 206 NLDFKGDLIRVAADQIKNLYELFLGVDATQVEVNPFGETDDGRVVCFDAKINFDDNAEFR 265
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +F+ ++++E+DP+EV A+++NLNY+ MDGNIGCLVNGAGLAMATMDIIKLHGGEPAN
Sbjct: 266 QKEVFAMDDMTEADPKEVLAAEHNLNYISMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 325
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD GGGV E + +AF++ISSD NVK ILVNVFGGIV+C+ IA G+ +AC+ L +PL
Sbjct: 326 FLDCGGGVGEGQVFEAFKLISSDENVKAILVNVFGGIVDCSIIANGITSACRGMDLKVPL 385
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
VVRL G NV++ IL ES LP+ A+DL++AA AC
Sbjct: 386 VVRLAGFNVEKATSILHESGLPIKIAADLEDAAKKAVAC 424
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + +AC+ L +PLVVRL G NV++ IL ES LP+ A+DL++AA
Sbjct: 369 ANGITSACRGMDLKVPLVVRLAGFNVEKATSILHESGLPIKIAADLEDAA 418
>gi|391346848|ref|XP_003747680.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Metaseiulus occidentalis]
Length = 419
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/388 (54%), Positives = 273/388 (70%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A +I + + + E+V+KAQ+LAGGRG G FD+G GV T + + +EKM+G++L+T
Sbjct: 56 ARDIAQSVKYDEFVVKAQVLAGGRGKGTFDSGLHGGVKLTRDPAQVVEFVEKMLGYRLVT 115
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQTPK G+ V KVM+A++++I RETY I+ DR NGPVV+ SP+GG DIE VA KTP L
Sbjct: 116 KQTPKEGVLVKKVMIAEALDIKRETYLAILMDRTFNGPVVVASPAGGVDIEEVAEKTPEL 175
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ P+D+++G+T+ A IA L+F+
Sbjct: 176 IFKQPVDINKGLTDEQAMSIAKNLQFE--------------------------------- 202
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G+ AA +++KL+ +F VDAT +EINP ET + +V+ DAKINFDDNA+FRQK+IF
Sbjct: 203 GNNMKDAAEQIKKLYQVFRRVDATMVEINPFGETPDGKVVCFDAKINFDDNAQFRQKDIF 262
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+Q + +ESDPREV+A+K+NLNY+GMDGNI CLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 263 AQEDHAESDPREVEAAKWNLNYIGMDGNIACLVNGAGLAMATMDIIKLHGGNPANFLDVG 322
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G V EE + +AFRI++ D VK ILVNVFGGIVNCATIA G+VNACK LS+PLVVRLE
Sbjct: 323 GSVGEEQVAEAFRILTQDPKVKAILVNVFGGIVNCATIANGIVNACKKISLSVPLVVRLE 382
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV K IL S LP+ A+DLD+AA
Sbjct: 383 GTNVDAAKEILSNSGLPIHSANDLDDAA 410
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNACK LS+PLVVRLEGTNV K IL S LP+ A+DLD+AA
Sbjct: 361 ANGIVNACKKISLSVPLVVRLEGTNVDAAKEILSNSGLPIHSANDLDDAA 410
>gi|442753327|gb|JAA68823.1| Putative gtp-specific succinyl-coa synthetase beta subunit [Ixodes
ricinus]
Length = 422
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/388 (53%), Positives = 275/388 (70%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K LN +E+VIKAQILAGGRG G F +G + GV T + + ++EKM+G+KL+T
Sbjct: 60 AQEISKTLNVEEFVIKAQILAGGRGKGTFSSGLRGGVKLTKDPAQVSELVEKMLGYKLVT 119
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQTPK G+ VNKVM+A++++I RETY I+ DR NGPV++ SP+GG DIE+VA KTP L
Sbjct: 120 KQTPKEGVLVNKVMIAEAMDIARETYLAILMDRSFNGPVIVASPAGGVDIEDVAEKTPQL 179
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PI + +GIT+ A+ +A L F+
Sbjct: 180 IFKEPISIQEGITDEQAR---------------------------------TVAKNLNFK 206
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G L +AA +++ L+NLF+ VDATQ+E+NP ET + V+ DAKINFDDNA FRQ++IF
Sbjct: 207 GPLLDQAAEQIKHLYNLFIKVDATQVEVNPFGETPDGRVVCFDAKINFDDNAAFRQQDIF 266
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+Q +VSESDPREV+A++ +LNY+GMDGNI CLVNGAGLAMATMDII+LHGG PANFLDVG
Sbjct: 267 AQEDVSESDPREVEAARNHLNYIGMDGNIACLVNGAGLAMATMDIIQLHGGSPANFLDVG 326
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G V E+ + QAF+I++ D VK +LVN+FGGIVNCATIA G+ +AC++ L +PLVVRLE
Sbjct: 327 GSVQEDQVTQAFKILTEDPKVKAVLVNIFGGIVNCATIANGITSACRTINLKVPLVVRLE 386
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV E ++IL S L + ASDL++AA
Sbjct: 387 GTNVDEARQILKNSGLAITPASDLEDAA 414
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + +AC++ L +PLVVRLEGTNV E ++IL S L + ASDL++AA
Sbjct: 365 ANGITSACRTINLKVPLVVRLEGTNVDEARQILKNSGLAITPASDLEDAA 414
>gi|260798917|ref|XP_002594446.1| hypothetical protein BRAFLDRAFT_208919 [Branchiostoma floridae]
gi|229279680|gb|EEN50457.1| hypothetical protein BRAFLDRAFT_208919 [Branchiostoma floridae]
Length = 411
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/379 (56%), Positives = 266/379 (70%), Gaps = 34/379 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+EYVIKAQILAGGRG G F NG K GV FT ++ +++ M+G KL+TKQTP G+ V
Sbjct: 58 REYVIKAQILAGGRGKGTFSNGVKGGVKFTTVPDEVGSLVKDMLGFKLVTKQTPPGGVLV 117
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP-HLVKTIPIDVH 164
KVMVA+SV+I+RETYF I+ DR NGPV+I S GG DIE VA KTP + K P+D+H
Sbjct: 118 QKVMVAESVDISRETYFAILMDRETNGPVIIASTEGGMDIEEVAEKTPDRIYKVQPVDIH 177
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G++ ++A+ +A L+F+GD +A ++ ++ L
Sbjct: 178 EGLSAAVARQLAQNLKFEGDKLDQATLQIMNMYQL------------------------- 212
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
FLSVDATQ+EINP ET + VI VDAKINFDDNAEFRQK IF+ ++ SE+D
Sbjct: 213 --------FLSVDATQVEINPFAETSDGRVICVDAKINFDDNAEFRQKEIFALDDCSETD 264
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PREV A K+NLNY+GMDGNIGCLVNGAGLAMATMDI+KLHGGEPANFLD GGGV E +
Sbjct: 265 PREVQAHKHNLNYIGMDGNIGCLVNGAGLAMATMDIVKLHGGEPANFLDCGGGVTEGQVF 324
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
+AF+I++SD VK +LVN+FGGIVNCATIA G+ A + L IPL+VRLEGTNV E KR
Sbjct: 325 EAFKILTSDPQVKAVLVNIFGGIVNCATIANGITAAARGIDLKIPLIVRLEGTNVDEAKR 384
Query: 405 ILDESKLPLIFASDLDEAA 423
IL +S LP+I A + EAA
Sbjct: 385 ILKKSGLPIIPADGMGEAA 403
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A + A + L IPL+VRLEGTNV E KRIL +S LP+I A + EAA +
Sbjct: 354 ANGITAAARGIDLKIPLIVRLEGTNVDEAKRILKKSGLPIIPADGMGEAAKHAV 407
>gi|346472581|gb|AEO36135.1| hypothetical protein [Amblyomma maculatum]
Length = 383
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/393 (52%), Positives = 274/393 (69%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ A I + L+ E+VIKAQILAGGRG G F +G + GV T + + ++ KM+G
Sbjct: 15 ENISQAQEISRTLDVAEFVIKAQILAGGRGKGTFSSGLRGGVKLTKDPDQVSELVSKMLG 74
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+KL+TKQTPK G+ VNKVM+A++++I RETY I+ DR +NGPV++ SP+GG DIE+VA
Sbjct: 75 YKLVTKQTPKDGVLVNKVMIAEALDIARETYLAILMDRSYNGPVIVASPAGGVDIEDVAE 134
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
KTP L+ P+++ +GI A+ IA
Sbjct: 135 KTPELIFKEPVNILEGIARKQAE---------------------------------TIAK 161
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L F+G L KAA ++++L++LF+ VDATQ+E+NP ET + V+ DAKINFDDNA FR
Sbjct: 162 NLNFKGPLLDKAAEQIERLYDLFIKVDATQVEVNPFGETPDGRVVCFDAKINFDDNAAFR 221
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
Q++IF+Q + SESDPREV A+K+NLNY+GMDGNI CLVNGAGLAMATMDII+LHGG PAN
Sbjct: 222 QQHIFAQEDTSESDPREVLAAKHNLNYIGMDGNIACLVNGAGLAMATMDIIQLHGGSPAN 281
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGG V E+ + QAF+II+ D VK +LVN+FGGIVNCATIA G+ +AC+S L +PL
Sbjct: 282 FLDVGGSVKEDQVTQAFKIITDDPKVKAVLVNIFGGIVNCATIANGITSACRSINLKVPL 341
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRLEGTNV E + IL S L + A+DL++AA
Sbjct: 342 VVRLEGTNVDEAREILSSSGLRITAAADLEDAA 374
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + +AC+S L +PLVVRLEGTNV E + IL S L + A+DL++AA
Sbjct: 325 ANGITSACRSINLKVPLVVRLEGTNVDEAREILSSSGLRITAAADLEDAA 374
>gi|383850888|ref|XP_003701006.1| PREDICTED: contactin-like [Megachile rotundata]
Length = 1650
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/395 (55%), Positives = 287/395 (72%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++D A + L+ L+ EYVIKAQ+LAGGRG G FDNGFK GVH T + + + +++ M+
Sbjct: 1280 VDDLNKANSALEKLHADEYVIKAQVLAGGRGKGWFDNGFKGGVHLTKDRKAVIDVVKNML 1339
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+L TKQT K GI V K+M+A+SVNI RETY CI+ DR HNGPV+I SP+GG DIE VA
Sbjct: 1340 GHRLFTKQTSKDGILVQKIMIAESVNIERETYICILMDRQHNGPVLIASPAGGMDIETVA 1399
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEF-QGDLKAKAATEVQKLWNLFLSSLAQKI 208
K P L+KTIP+D++ GI +S+A++++ FL + ++ KA E++ LW
Sbjct: 1400 EKNPELIKTIPLDIYYGIDDSIAKEVSTFLGIVEPTVQEKAIYELKNLW----------- 1448
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
LF+ +DA Q+EINPLV T +++VI+VDAKI+FDDNA+
Sbjct: 1449 ----------------------KLFIDIDALQVEINPLVVTTDKQVIAVDAKISFDDNAQ 1486
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQ+++F+ ++ +E DPREV AS++NLNY+GMDGNIGCLVNGAGLAMATMDIIKL+GG P
Sbjct: 1487 FRQQDLFALDDGNEKDPREVAASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKLNGGSP 1546
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGG V E+ + +AF+I+S D VK ILVNVFGGIVNCA IAKG++ A + +L I
Sbjct: 1547 ANFLDVGGSVKEDQVYEAFKILSEDPKVKVILVNVFGGIVNCAIIAKGIIAAYHNLRLKI 1606
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV E KR+L ES L ++ A+DLDEAA
Sbjct: 1607 PLVVRLEGTNVTEAKRLLAESDLSILTANDLDEAA 1641
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%)
Query: 479 SFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
+ +L IPLVVRLEGTNV E KR+L ES L ++ A+DLDEAA
Sbjct: 1601 NLRLKIPLVVRLEGTNVTEAKRLLAESDLSILTANDLDEAA 1641
>gi|167520005|ref|XP_001744342.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777428|gb|EDQ91045.1| predicted protein [Monosiga brevicollis MX1]
Length = 397
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/396 (52%), Positives = 276/396 (69%), Gaps = 35/396 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFT--NNVQDIPPILEKM 88
++A A + K+LN E V+KAQ+ AGGRG G F +G KSGVH + + + ++E+M
Sbjct: 27 DNAENALQLAKELNVPEIVLKAQVHAGGRGKGTFSSGLKSGVHLIPGDQPEKVKDLVEQM 86
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
IG+ L+TKQTP G+ VNKVMVA++++I RETYF I+ DR GPV++ SP GG DIE V
Sbjct: 87 IGYNLVTKQTPPDGVTVNKVMVAEALDIARETYFAILMDRESGGPVLVGSPEGGVDIEEV 146
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A ++P L+ P+D+++G+ ++ + ++
Sbjct: 147 AERSPELIFKEPVDINEGVQDAQLE---------------------------------RM 173
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
A L F G KA E+++L+ LF+ VDA+Q+EINP ET + V+ DAKINFDDNA
Sbjct: 174 ATNLGFTGAKHEKAKKEMKQLYELFMGVDASQVEINPFAETPDGRVLCFDAKINFDDNAA 233
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQ+ IF+ + +E DPREV+ASK+NLNY+GMDGNI CLVNGAGLAMATMDIIK HGGEP
Sbjct: 234 FRQQKIFAMRDTAEEDPREVEASKFNLNYIGMDGNIACLVNGAGLAMATMDIIKHHGGEP 293
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLD GGGV E+ + AFRI++SD V+ ILVN+FGGIVNCATIA G+V AC+ +L +
Sbjct: 294 ANFLDCGGGVTEQMVANAFRILTSDQQVEAILVNIFGGIVNCATIASGIVFACREVELQL 353
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
PLVVRLEGTNV+ GK+IL +SKLP+IFA+DLDEAA
Sbjct: 354 PLVVRLEGTNVEGGKQILADSKLPIIFAADLDEAAQ 389
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +V AC+ +L +PLVVRLEGTNV+ GK+IL +SKLP+IFA+DLDEAA + A
Sbjct: 339 ASGIVFACREVELQLPLVVRLEGTNVEGGKQILADSKLPIIFAADLDEAAQKAVAA 394
>gi|148666929|gb|EDK99345.1| mCG127318 [Mus musculus]
Length = 466
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/437 (50%), Positives = 292/437 (66%), Gaps = 48/437 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 66 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 125
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 126 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASS 185
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 186 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 212
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 213 GFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 273 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 332
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 333 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 392
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLEGTNVQEGKR 452
RLEGTNVQE + IL S LP+ A DL++AA V R TNVQE +
Sbjct: 393 RLEGTNVQEAQNILKSSGLPITSAVDLEDAAK------------KAVAR---TNVQEAQN 437
Query: 453 ILDESKLPLIFASDLDE 469
IL S LP+ A DL++
Sbjct: 438 ILKSSGLPITSAVDLED 454
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++AA
Sbjct: 374 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLEDAA 423
>gi|241997698|ref|XP_002433498.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
[Ixodes scapularis]
gi|215490921|gb|EEC00562.1| GTP-specific succinyl-CoA synthetase, beta subunit, putative
[Ixodes scapularis]
Length = 422
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/388 (53%), Positives = 272/388 (70%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K LN +E+VIKAQILAGGRG G F +G + GV T + + ++EKM+G+KL+T
Sbjct: 60 AQEISKTLNVEEFVIKAQILAGGRGKGTFSSGLRGGVKLTKDPAQVSELVEKMLGYKLVT 119
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQTPK G+ VNK ++++++I RETY I+ DR NGPV++ SP+GG DIE+VA KTP L
Sbjct: 120 KQTPKEGVLVNKARISEAMDIARETYLAILMDRSFNGPVIVASPAGGVDIEDVAEKTPQL 179
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PI + +GIT+ A+ +A L F+
Sbjct: 180 IFKEPISIQEGITDEQAK---------------------------------TVAKNLNFK 206
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G L +AA +++ L+NLF+ VDATQ+E+NP ET + V+ DAKINFDDNA FRQ++IF
Sbjct: 207 GPLLDQAAEQIKHLYNLFIKVDATQVEVNPFGETPDGRVVCFDAKINFDDNAAFRQRDIF 266
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+Q +VSESDPREV+A++ +LNY+GMDGNI CLVNGAGLAMATMDII+LHGG PANFLDVG
Sbjct: 267 AQEDVSESDPREVEAARNHLNYIGMDGNIACLVNGAGLAMATMDIIQLHGGSPANFLDVG 326
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G V E+ + QAF+I++ D VK +LVN+FGGIVNCATIA G+ +AC++ L +PLVVRLE
Sbjct: 327 GSVQEDQVTQAFKILTEDPKVKAVLVNIFGGIVNCATIANGITSACRTINLKVPLVVRLE 386
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV E + IL S L + ASDL++AA
Sbjct: 387 GTNVDEARLILKNSGLAITPASDLEDAA 414
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + +AC++ L +PLVVRLEGTNV E + IL S L + ASDL++AA
Sbjct: 365 ANGITSACRTINLKVPLVVRLEGTNVDEARLILKNSGLAITPASDLEDAA 414
>gi|443683520|gb|ELT87747.1| hypothetical protein CAPTEDRAFT_162465 [Capitella teleta]
Length = 383
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/392 (54%), Positives = 267/392 (68%), Gaps = 33/392 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A I ++ EYV+KAQILAGGRG G FDNGFK GVH T + + ++E M+GHK
Sbjct: 17 AEEAKGITREFKCDEYVVKAQILAGGRGKGVFDNGFKGGVHLTKDASKVAGLVESMLGHK 76
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQT G+ V+KVMVAK+++I+RETYF I+ DR + GPV++ SP+GG DIE VA KT
Sbjct: 77 LKTKQTGPDGVMVSKVMVAKALDISRETYFAILMDRGYAGPVMVGSPAGGMDIEEVADKT 136
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +G+T+ A +A L+F+G A
Sbjct: 137 PELIFKEGIDITKGVTDEQATTMAKNLQFEG-------------------------ARLT 171
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
E AA +++ L+ LFL VDATQ+EINP ET + EV+ DAKINFDDNAE+RQK
Sbjct: 172 E--------AAEQIKALYKLFLKVDATQVEINPFGETPQGEVVCFDAKINFDDNAEYRQK 223
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
IF+ N+ +ESDPREV A+ +NLNY+GM+GNIGCLVNGAGLAMATMDI+KLHGGEPANFL
Sbjct: 224 EIFALNDTTESDPREVKAASHNLNYIGMEGNIGCLVNGAGLAMATMDIVKLHGGEPANFL 283
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GGGV EE + AF+I++SD VK ILVNVFGGIV+C TIA G+VNA L IP+V
Sbjct: 284 DCGGGVTEEQVFHAFKILTSDPQVKAILVNVFGGIVDCRTIANGVVNAANDLDLKIPVVC 343
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEG NV E + IL S L + A+D ++ AS
Sbjct: 344 RLEGNNVTEAREILSNSGLAITAAADFEDVAS 375
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +VNA L IP+V RLEG NV E + IL S L + A+D ++ A+
Sbjct: 325 ANGVVNAANDLDLKIPVVCRLEGNNVTEAREILSNSGLAITAAADFEDVAS 375
>gi|334335492|ref|XP_001372226.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Monodelphis domestica]
Length = 411
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/391 (52%), Positives = 276/391 (70%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A N K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 44 ANDALNAAKRLNAKEIVLKAQILAGGRGKGTFNSGLKGGVHLTKDPKVVGQLAQQMIGYN 103
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVM+A++++I+RETY I+ DR NGPV++ SP GG DIE VAA T
Sbjct: 104 LTTKQTPKDGVKVNKVMIAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAATT 163
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S A+ ++A+ L
Sbjct: 164 PELIFKEEIDIFEGIKDSQAE---------------------------------RMAENL 190
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
FRG LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 191 GFRGALKTQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 250
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 251 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFL 310
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 311 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKVPLVV 370
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNVQE + IL+ S LP+ ASDL++AA
Sbjct: 371 RLEGTNVQEAQNILNNSGLPITSASDLEDAA 401
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNVQE + IL+ S LP+ ASDL++AA
Sbjct: 352 ANGITRACRELELKVPLVVRLEGTNVQEAQNILNNSGLPITSASDLEDAA 401
>gi|196004012|ref|XP_002111873.1| hypothetical protein TRIADDRAFT_55336 [Trichoplax adhaerens]
gi|190585772|gb|EDV25840.1| hypothetical protein TRIADDRAFT_55336 [Trichoplax adhaerens]
Length = 426
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/388 (52%), Positives = 273/388 (70%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K +N E+VIKAQILAGGRG GHF +G K GVH T +V++I + +M+G++LIT
Sbjct: 64 AIALAKKMNVDEFVIKAQILAGGRGKGHFTSGLKKGVHLTKDVEEIGNLASQMLGYRLIT 123
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQTP G+ V K+M+A++++I++ETYF IV DR +NGPV++ SP+GG DIE VAA +P L
Sbjct: 124 KQTPGEGVPVKKLMIAEALDISKETYFAIVMDRHYNGPVIVASPAGGVDIEEVAANSPEL 183
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +PID+ GI + A ++A L+F D K A E
Sbjct: 184 IYKVPIDIVDGINDQQALELAKNLKFS-DSKVNEAAE----------------------- 219
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++++L+NLFLSVDA+Q+EINP ET + V+ DAKINFDD+A++RQK++F
Sbjct: 220 ---------QIKRLYNLFLSVDASQVEINPFGETTDGRVVCFDAKINFDDSAKYRQKDVF 270
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++SESD RE+ A+K NLNY+G+DGNI CLVNGAGLAMATMDI+KLHGGEPANFLDVG
Sbjct: 271 AMEDLSESDAREIAAAKSNLNYIGLDGNIACLVNGAGLAMATMDIVKLHGGEPANFLDVG 330
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GGV E+ + AF ++SSD VK ILVN+FGGIVNCATIA G+ A + L++P++ RLE
Sbjct: 331 GGVTEQQVYDAFNLVSSDKAVKSILVNIFGGIVNCATIANGITKAARGMNLNLPVIARLE 390
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV E ++IL ES L + A D ++AA
Sbjct: 391 GTNVDEARKILLESGLNITPADDFEDAA 418
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + A + L++P++ RLEGTNV E ++IL ES L + A D ++AA
Sbjct: 369 ANGITKAARGMNLNLPVIARLEGTNVDEARKILLESGLNITPADDFEDAA 418
>gi|326435989|gb|EGD81559.1| Suclg2 protein [Salpingoeca sp. ATCC 50818]
Length = 420
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/381 (52%), Positives = 269/381 (70%), Gaps = 33/381 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
+DL +EYV+KAQ+ AGGRG G F +G + GV T + + + +M+G+KL+TKQTP
Sbjct: 58 RDLAAREYVLKAQVHAGGRGKGTFSSGLQGGVKLTTDPKQVKEYASQMLGYKLVTKQTPP 117
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G+ V+K+MVA++++I RETYF I+ DR NGPV++ SP GG DIE VAAKTP L+ P
Sbjct: 118 DGVLVSKLMVAEALDIARETYFAILMDRDSNGPVMVASPEGGVDIEEVAAKTPELIFKEP 177
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID+ +G+TE +A L F+G Q+ D
Sbjct: 178 IDIVKGVTEEQLDRLAINLRFEG----------------------QQFHD---------- 205
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
A +++KL+ LFL+VDATQ+EINP ET + +V+ DAKINFDDNA FRQ+ IF+ +
Sbjct: 206 -AKEQMRKLYELFLAVDATQVEINPFAETPDGQVVCFDAKINFDDNAAFRQQEIFAMRDT 264
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E DPR+V+A K+ LNY+GMDGNI CLVNGAGLAMATMDIIKLHGGEPANFLD GGGV E
Sbjct: 265 TEEDPRDVEADKHGLNYIGMDGNIACLVNGAGLAMATMDIIKLHGGEPANFLDCGGGVTE 324
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
+ + AF++++ D V+ ILVN+FGGIVNCATIA G+V+ACK+ +L +PLVVRLEGTNV+
Sbjct: 325 DMVTSAFKLLTGDKQVEAILVNIFGGIVNCATIANGIVSACKNVELQVPLVVRLEGTNVE 384
Query: 401 EGKRILDESKLPLIFASDLDE 421
+ +++L ES LP+I A+DLD+
Sbjct: 385 KARQVLKESGLPIITATDLDD 405
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 40/48 (83%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A +V+ACK+ +L +PLVVRLEGTNV++ +++L ES LP+I A+DLD+
Sbjct: 358 ANGIVSACKNVELQVPLVVRLEGTNVEKARQVLKESGLPIITATDLDD 405
>gi|354465562|ref|XP_003495248.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Cricetulus griseus]
Length = 414
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/392 (53%), Positives = 275/392 (70%), Gaps = 36/392 (9%)
Query: 33 ARTATNIL---KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
A TAT L K LN KE V+KAQILAGGRG G FD+G K GVH T + + + + ++MI
Sbjct: 44 ANTATEALEAAKRLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPKVVGQLAQQMI 103
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VA
Sbjct: 104 GYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVA 163
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A P L+ ID+ +GI +S AQ ++A
Sbjct: 164 ASNPELIFKEQIDIFEGINDSQAQ---------------------------------RMA 190
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+ L F G LK +AA +++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEF
Sbjct: 191 ENLGFLGPLKNQAADQIKKLYHLFLKIDATQVEVNPFGETAEGQVVCFDAKINFDDNAEF 250
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PA
Sbjct: 251 RQKDIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPA 310
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLD+GGGV E + QAF++I+SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +P
Sbjct: 311 NFLDLGGGVKEAQVYQAFKLITSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVP 370
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
LVVRLEGTNVQE ++IL S LP+ A+DL++
Sbjct: 371 LVVRLEGTNVQEAQKILRNSGLPITSAADLED 402
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL S LP+ A+DL++
Sbjct: 355 ANGITKACRELELKVPLVVRLEGTNVQEAQKILRNSGLPITSAADLED 402
>gi|54038306|gb|AAH84473.1| LOC496495 protein, partial [Xenopus (Silurana) tropicalis]
Length = 420
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/393 (52%), Positives = 271/393 (68%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++A A + K L +E V+KAQILAGGRG G FD+G K GVH T + + + ++MIG
Sbjct: 51 DNANDALDAAKRLKAREIVLKAQILAGGRGKGTFDSGLKGGVHLTKDPNKVEELTKQMIG 110
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQT G+ V+KVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VA
Sbjct: 111 YNLTTKQTVAGGVKVHKVMVAEALDISRETYLAILMDRACNGPVLVGSPQGGMDIEEVAE 170
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
KTP L+ ID+ +GI +S A ++AD
Sbjct: 171 KTPELIFKEEIDIFEGIKDSQAL---------------------------------RMAD 197
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L F+G L+ +AA ++++L++LFL VDATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 198 NLGFKGPLQQQAAEQIKRLYHLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 257
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF+ ++ SE+DP E +A+ Y+L Y+GMDGNI C VNGAGLAMAT DII LHGG+PAN
Sbjct: 258 QKEIFAMDDTSETDPIENEANSYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPAN 317
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 318 FLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 377
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRLEGTNV E KRIL ES LP+ A+DLD+AA
Sbjct: 378 VVRLEGTNVHEAKRILAESGLPITSANDLDDAA 410
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A+DLD+AA
Sbjct: 361 ANGITKACRELELKVPLVVRLEGTNVHEAKRILAESGLPITSANDLDDAA 410
>gi|71681082|gb|AAH99746.1| Suclg2 protein [Rattus norvegicus]
Length = 429
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/389 (52%), Positives = 272/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G FD+G K GVH T + + + + ++MIG+
Sbjct: 62 AKEAQEAAKRLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPKVVGQLAQQMIGYN 121
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 122 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVLVGSPQGGVDIEEVAASS 181
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 182 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 208
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 209 GFLGSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 268
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 269 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 328
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 329 DLGGGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVV 388
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 389 RLEGTNVQEAQNILKSSGLPITSAVDLED 417
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 370 ANGITKACQELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 417
>gi|51260799|gb|AAH79367.1| Suclg2 protein [Rattus norvegicus]
Length = 432
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/389 (52%), Positives = 272/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G FD+G K GVH T + + + + ++MIG+
Sbjct: 65 AKEAQEAAKRLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPKVVGQLAQQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVLVGSPQGGVDIEEVAASS 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFLGSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 392 RLEGTNVQEAQNILKSSGLPITSAVDLED 420
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 373 ANGITKACQELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 420
>gi|59808474|gb|AAH89863.1| Suclg2 protein [Rattus norvegicus]
Length = 387
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/389 (52%), Positives = 272/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G FD+G K GVH T + + + + ++MIG+
Sbjct: 20 AKEAQEAAKRLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPKVVGQLAQQMIGYN 79
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 80 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVLVGSPQGGVDIEEVAASS 139
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 140 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 166
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 167 GFLGSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 226
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 227 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 286
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 287 DLGGGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVV 346
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 347 RLEGTNVQEAQNILKSSGLPITSAVDLED 375
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 328 ANGITKACQELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 375
>gi|268534598|ref|XP_002632430.1| Hypothetical protein CBG00458 [Caenorhabditis briggsae]
Length = 415
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/380 (54%), Positives = 266/380 (70%), Gaps = 35/380 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKS--GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
EYV+KAQILAGGRG G F +G K GV+ T ++ +++MIG +L+TKQT + G+
Sbjct: 61 EYVVKAQILAGGRGKGKFIDGTKGIGGVYITKEKKEALDAIDEMIGKRLVTKQTTEDGVR 120
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V+KVM+A+ V+I RETY ++ DR NGPVV+ SP GG DIE VA KTP + PID+
Sbjct: 121 VDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQ 180
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+TE+ Q L KIA L+F G L AAT
Sbjct: 181 MGMTEA-----------------------QSL----------KIAKELQFEGKLLGAAAT 207
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
E+++L++LF++VDATQ+EINPLVET + V VDAK+NFDD+A +RQK+IF+ E D
Sbjct: 208 EIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKDIFAYETFEEHD 267
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PREVDA ++NLNY+GMDGNI CLVNGAGLAMATMD+IKLHGGEPANFLDVGG V E+++
Sbjct: 268 PREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTEDAVF 327
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
A RII+SD VKC+L+N+FGGIVNCATIA G+VNA L +P+VVRLEGTNV K+
Sbjct: 328 NAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLEGTNVDAAKQ 387
Query: 405 ILDESKLPLIFASDLDEAAS 424
I+ +S L ++ A++LDEAA+
Sbjct: 388 IMKKSGLKILTANNLDEAAA 407
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA L +P+VVRLEGTNV K+I+ +S L ++ A++LDEAA
Sbjct: 357 ANGVVNAVNKIGLKVPMVVRLEGTNVDAAKQIMKKSGLKILTANNLDEAA 406
>gi|355722595|gb|AES07625.1| succinate-CoA ligase, GDP-forming, beta subunit [Mustela putorius
furo]
Length = 431
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/391 (52%), Positives = 272/391 (69%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE+V+KAQILAGGRG G F +G K GVH T + Q + + ++MIG+
Sbjct: 65 AKEALEAAKKLNAKEFVLKAQILAGGRGKGVFSSGLKGGVHLTKDPQVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVIVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ +D+ +G+ +S AQ ++A+ L
Sbjct: 185 PELIFKEQVDITEGVKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL+ S LP+ A DL++AA
Sbjct: 392 RLEGTNVHEAQNILNNSGLPITSAVDLEDAA 422
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL+ S LP+ A DL++AA
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAQNILNNSGLPITSAVDLEDAA 422
>gi|47219005|emb|CAG02043.1| unnamed protein product [Tetraodon nigroviridis]
Length = 431
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/394 (52%), Positives = 271/394 (68%), Gaps = 36/394 (9%)
Query: 33 ARTATNIL---KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
A TA++ L K LN KE V+KAQILAGGRG G FD+G K GVH T + + + KM+
Sbjct: 62 ADTASDALEAAKKLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPAVVGDLASKML 121
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L TKQTP+ G+ V VMVA++++I+RETYF I+ DR +NGPV++ SP GG DIE VA
Sbjct: 122 GFNLTTKQTPQEGVKVKTVMVAEALDISRETYFAILMDRSYNGPVMVGSPQGGVDIEEVA 181
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A P L+ ID+ +G+ + A ++A
Sbjct: 182 ASNPELIFKEVIDIFEGVRDDQAL---------------------------------RMA 208
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L F+G L+ +AA ++++L++LFL VDATQ+E+NP ET E +V+ DAKINFDDNAEF
Sbjct: 209 VNLGFKGVLQRQAADQIKRLYDLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEF 268
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK++F+ +++SESDP E +A+K+ L Y+GMDGNI C VNGAGLAMAT DII LHGG+PA
Sbjct: 269 RQKDVFAMDDMSESDPTETEAAKWGLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPA 328
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLD+GGGV E + +AF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +P
Sbjct: 329 NFLDLGGGVQERQVYEAFKLLNADPKVEAILVNIFGGIVNCAIIANGITKACRELQLKVP 388
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LVVRLEGTNV E KRIL ES LP+ A DLD+AA
Sbjct: 389 LVVRLEGTNVHEAKRILRESGLPITAAEDLDDAA 422
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A DLD+AA
Sbjct: 373 ANGITKACRELQLKVPLVVRLEGTNVHEAKRILRESGLPITAAEDLDDAA 422
>gi|189491689|ref|NP_001094220.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Rattus norvegicus]
gi|149036796|gb|EDL91414.1| rCG56440 [Rattus norvegicus]
gi|169642263|gb|AAI60886.1| Suclg2 protein [Rattus norvegicus]
Length = 434
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/389 (52%), Positives = 272/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G FD+G K GVH T + + + + ++MIG+
Sbjct: 67 AKEAQEAAKRLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPKVVGQLAQQMIGYN 126
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 127 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVLVGSPQGGVDIEEVAASS 186
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 187 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 213
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 214 GFLGSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 273
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 274 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 333
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 334 DLGGGVKESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVV 393
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 394 RLEGTNVQEAQNILKSSGLPITSAVDLED 422
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 375 ANGITKACQELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 422
>gi|341886101|gb|EGT42036.1| hypothetical protein CAEBREN_13230 [Caenorhabditis brenneri]
Length = 416
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/380 (54%), Positives = 263/380 (69%), Gaps = 35/380 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKS--GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
EYV+KAQILAGGRG G F NG K GV+ T +++MIG +L+TKQT + G+
Sbjct: 61 EYVVKAQILAGGRGKGKFVNGTKGIGGVYITKEKNAALEAIDEMIGKRLVTKQTTEEGVR 120
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V+KVM+A+ V+I RETY ++ DR NGPVV+ SP GG DIE VA KTP + PID+
Sbjct: 121 VDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQ 180
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T+S A KIA L+F G+L AAT
Sbjct: 181 MGMTDSQAL---------------------------------KIAKELQFEGNLLGAAAT 207
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
E+++L++LF++VDATQ+EINPLVET + V VDAK+NFDD+A +RQK IF+ E D
Sbjct: 208 EIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKEIFAYETFEEHD 267
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PREVDA ++NLNY+GMDGNI CLVNGAGLAMATMD+IKLHGGEPANFLDVGG V E+++
Sbjct: 268 PREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTEDAVF 327
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
A RII+SD VKC+L+N+FGGIVNCATIA G+VNA L +P+VVRLEGTNV K+
Sbjct: 328 NAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLEGTNVDAAKQ 387
Query: 405 ILDESKLPLIFASDLDEAAS 424
I+ +S L ++ A++LDEAA+
Sbjct: 388 IMKKSGLKILTANNLDEAAA 407
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA L +P+VVRLEGTNV K+I+ +S L ++ A++LDEAA
Sbjct: 357 ANGVVNAVNKIGLKVPMVVRLEGTNVDAAKQIMKKSGLKILTANNLDEAA 406
>gi|329112627|gb|AEB72017.1| RH70213p [Drosophila melanogaster]
Length = 312
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/337 (61%), Positives = 251/337 (74%), Gaps = 34/337 (10%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIG++LITKQTPK+GI VNKVMVA+S+NITRETY CI+ DR HNGPV+I SP+GG DIE
Sbjct: 1 MIGNRLITKQTPKSGILVNKVMVARSINITRETYLCILLDREHNGPVLIASPAGGMDIEA 60
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP +KT+P+D+ + I ES ++A FLEF+GD + A E+QK
Sbjct: 61 VAEETPEKIKTVPLDIGKPIPESTLLEVAKFLEFKGDSVKRCAEEIQK------------ 108
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
L+ LF +VDA Q+EINPL ETD+ EVISVDAK+NFDDNA
Sbjct: 109 ---------------------LYTLFKAVDAVQIEINPLAETDKGEVISVDAKLNFDDNA 147
Query: 268 EFRQKNIFSQNEV-SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
+FRQK+IFS + ESDPREV+A+KYNLNYV MDGNIGCLVNGAGLAMATMDIIKL+GG
Sbjct: 148 QFRQKDIFSMDVTEEESDPREVEAAKYNLNYVAMDGNIGCLVNGAGLAMATMDIIKLNGG 207
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKL 386
EPANFLDVGGGV E+ + +AF I+++D VK ILVNVFGGIVNCATIA G+V A K +L
Sbjct: 208 EPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVAASKKLQL 267
Query: 387 SIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
++PLVVRLEGTNV + + IL S LP+ ASDLD+AA
Sbjct: 268 NVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAA 304
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K +L++PLVVRLEGTNV + + IL S LP+ ASDLD+AA+ + A
Sbjct: 255 ANGIVAASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQTASDLDDAAHKAVAA 310
>gi|291237501|ref|XP_002738684.1| PREDICTED: GTP-specific succinyl-CoA synthetase, beta subunit,
putative-like [Saccoglossus kowalevskii]
Length = 389
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/377 (53%), Positives = 261/377 (69%), Gaps = 33/377 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
E V+KAQILAGGRG G F +G + GVH T ++ +++KM+GH L TKQT K G+ V
Sbjct: 34 ELVVKAQILAGGRGKGKFSSGLQGGVHLTTKADEVSSLIKKMLGHTLTTKQTGKDGVIVK 93
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
KVM+A++++I RETYF I+ DR +GPV++ SP+GG DIE VA +P L+ PID+ G
Sbjct: 94 KVMIAEALDIERETYFAILMDRTFDGPVMVGSPAGGVDIEEVAKNSPDLIFKKPIDITVG 153
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
ITE +A D+A L+F A+K + +AA ++
Sbjct: 154 ITEDMALDMAANLDFD----------------------AEK-----------RTEAARQI 180
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
Q L+ LF+ VDATQ+EINP ET + V+ DAK+NFDDN+EFRQK +FS ++ SE+DPR
Sbjct: 181 QNLYKLFIGVDATQVEINPFGETPDGRVVCFDAKMNFDDNSEFRQKQVFSMDDESETDPR 240
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
E A+ LNYVGMDGNIGCLVNGAGLAMATMDII L+GG PANFLDVGGGV E +++A
Sbjct: 241 ETRAAACGLNYVGMDGNIGCLVNGAGLAMATMDIIDLYGGHPANFLDVGGGVQEHQVVEA 300
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
II+SD VK IL+N+FGGIVNCAT+A GL+ A + KL +PLVVRL GTNV ++IL
Sbjct: 301 IDIITSDPQVKAILINIFGGIVNCATVANGLITALQGIKLEVPLVVRLAGTNVDAARQIL 360
Query: 407 DESKLPLIFASDLDEAA 423
D S LP++ ASDLD+AA
Sbjct: 361 DNSNLPIVSASDLDDAA 377
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ A + KL +PLVVRL GTNV ++ILD S LP++ ASDLD+AA
Sbjct: 328 ANGLITALQGIKLEVPLVVRLAGTNVDAARQILDNSNLPIVSASDLDDAA 377
>gi|317419039|emb|CBN81077.1| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Dicentrarchus labrax]
Length = 383
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/389 (51%), Positives = 268/389 (68%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K LN KE V+KAQILAGGRG G FD+G K GVH T + + + KM+G+
Sbjct: 17 ASEALDAAKRLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPAVVGELANKMLGYN 76
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ V VMVA++++I+RETYF I+ DR NGPV++ SP GG DIE VAA T
Sbjct: 77 LTTKQTPKDGVKVKTVMVAEALDISRETYFAILMDRSCNGPVMVGSPQGGMDIEEVAAST 136
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ QG+ + A ++A L
Sbjct: 137 PELIFKEVIDIFQGVQDDQAL---------------------------------RMAANL 163
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F+G L+ +AA ++++L++LFL VDATQ+E+NPL ET E +V+ DAKINFDDNAEFRQK
Sbjct: 164 GFKGPLQRQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQK 223
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F+ ++++ESDP E +A+K++L Y+G+DGNI C VNGAGLAMAT DII LHGG+PANFL
Sbjct: 224 AVFAMDDMTESDPTETEAAKWDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGKPANFL 283
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 284 DLGGGVKERQVYEAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 343
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E KRIL ES LP+ A +LD+
Sbjct: 344 RLEGTNVHEAKRILTESGLPITAAENLDD 372
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A +LD+
Sbjct: 325 ANGITKACRELELKVPLVVRLEGTNVHEAKRILTESGLPITAAENLDD 372
>gi|189525094|ref|XP_001923821.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Danio rerio]
Length = 432
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 265/389 (68%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L KE V+KAQILAGGRG G F++G K GVH T + + + KM+G+
Sbjct: 65 ASEALEAAKRLKAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPAVVGELASKMLGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ V VMVA++++I+RETYF I+ DR NGPV++ SP GG DIE VAA T
Sbjct: 125 LTTKQTPKEGVEVKTVMVAEALDISRETYFAILMDRSCNGPVMVGSPQGGMDIEEVAAAT 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +G+ + A ++A L
Sbjct: 185 PELIFKEVIDIFEGVRDDQAL---------------------------------RMAANL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F+G L+ +AA ++++L++LFL VDATQ+E+NPL ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFKGPLERQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS ++ +ESDP E +A+KY+L Y+GMDGNI C VNGAGLAMAT DII LHGG+PANFL
Sbjct: 272 AVFSMDDTAESDPIETEAAKYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + AF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKENQVYAAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E KRIL ES LP+ A+DLD+
Sbjct: 392 RLEGTNVHEAKRILSESGLPITSATDLDD 420
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A+DLD+
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAKRILSESGLPITSATDLDD 420
>gi|308482588|ref|XP_003103497.1| hypothetical protein CRE_28686 [Caenorhabditis remanei]
gi|308259918|gb|EFP03871.1| hypothetical protein CRE_28686 [Caenorhabditis remanei]
Length = 415
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/380 (53%), Positives = 261/380 (68%), Gaps = 35/380 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKS--GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
EYV+KAQILAGGRG G F NG K GV+ T +++MIG +L+TKQT + G+
Sbjct: 61 EYVVKAQILAGGRGKGKFINGTKGIGGVYITKEKTAALEAIDEMIGKRLVTKQTTEEGVR 120
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V+KVM+A+ V+I RETY ++ DR NGPVV+ SP GG DIE VA KTP + PID+
Sbjct: 121 VDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQ 180
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T+ A KIA L+F G+L AAT
Sbjct: 181 MGMTDGQAL---------------------------------KIAKDLQFEGNLLGAAAT 207
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
E+++L++LF++VDATQ+EINPLVET + V VDAK+NFDD+A +RQK IF+ E D
Sbjct: 208 EIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKEIFAYETFEEHD 267
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PREVDA ++NLNY+GMDGNI CLVNGAGLAMATMD+IKLHGGEPANFLDVGG V E+++
Sbjct: 268 PREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTEDAVF 327
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
A RII+SD VKC+L+N+FGGIVNCATIA G+VNA L +P+VVRLEGTNV K
Sbjct: 328 NAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLEGTNVDAAKL 387
Query: 405 ILDESKLPLIFASDLDEAAS 424
I+ +S L ++ A++LDEAA+
Sbjct: 388 IMKKSGLTILTANNLDEAAA 407
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA L +P+VVRLEGTNV K I+ +S L ++ A++LDEAA
Sbjct: 357 ANGVVNAVNKIGLKVPMVVRLEGTNVDAAKLIMKKSGLTILTANNLDEAA 406
>gi|33989739|gb|AAH56551.1| Suclg2 protein, partial [Danio rerio]
Length = 419
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 265/389 (68%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L KE V+KAQILAGGRG G F++G K GVH T + + + KM+G+
Sbjct: 52 ASEALEAAKRLKAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPAVVGELASKMLGYN 111
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ V VMVA++++I+RETYF I+ DR NGPV++ SP GG DIE VAA T
Sbjct: 112 LTTKQTPKEGVEVKTVMVAEALDISRETYFAILMDRSCNGPVMVGSPQGGMDIEEVAAAT 171
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +G+ + A ++A L
Sbjct: 172 PELIFKEVIDIFEGVRDDQAL---------------------------------RMAANL 198
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F+G L+ +AA ++++L++LFL VDATQ+E+NPL ET E +V+ DAKINFDDNAEFRQK
Sbjct: 199 GFKGPLERQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQK 258
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS ++ +ESDP E +A+KY+L Y+GMDGNI C VNGAGLAMAT DII LHGG+PANFL
Sbjct: 259 AVFSMDDTAESDPIETEAAKYDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFL 318
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + AF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 319 DLGGGVKENQVYAAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 378
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E KRIL ES LP+ A+DLD+
Sbjct: 379 RLEGTNVHEAKRILSESGLPITSATDLDD 407
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A+DLD+
Sbjct: 360 ANGITKACRELELKVPLVVRLEGTNVHEAKRILSESGLPITSATDLDD 407
>gi|165972309|ref|NP_035637.2| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
precursor [Mus musculus]
gi|85681897|sp|Q9Z2I8.3|SUCB2_MOUSE RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial; AltName: Full=GTP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-G chain; Short=SCS-betaG; Flags:
Precursor
gi|74189034|dbj|BAE39282.1| unnamed protein product [Mus musculus]
Length = 433
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/389 (51%), Positives = 271/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 66 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 125
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 126 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASS 185
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 186 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 212
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 213 GFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 273 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 332
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 333 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 392
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 393 RLEGTNVQEAQNILKSSGLPITSAVDLED 421
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 374 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 421
>gi|328787872|ref|XP_003251020.1| PREDICTED: contactin-like [Apis mellifera]
Length = 1641
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/395 (52%), Positives = 271/395 (68%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++D A + L++L+ EYVIKAQ+LAGGRG G FDNGFK GVH T + + + +++ M+
Sbjct: 1271 VDDLNKANSALQNLHANEYVIKAQVLAGGRGKGWFDNGFKGGVHLTKDRKAVIDVVKNML 1330
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+L TKQT + GI V K+M+A+SVNI RETY CI+ DR +NGPV+I SP+GG DIE VA
Sbjct: 1331 GHRLFTKQTSEDGILVQKIMIAESVNIARETYICILMDRQYNGPVLIASPAGGMDIETVA 1390
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGD-LKAKAATEVQKLWNLFLSSLAQKI 208
K P L+KTIP+D++ GI + +A+D++ FL F ++ KA E++ LW
Sbjct: 1391 EKNPELIKTIPLDIYYGIDDEIAKDVSIFLGFMDPTVQQKAIYELKNLW----------- 1439
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
LF+ +DA Q+EINPLVET + +VI+VDAKI+FDDNA+
Sbjct: 1440 ----------------------KLFVDIDALQVEINPLVETTDNQVIAVDAKISFDDNAQ 1477
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQ+++F+ DPRE DA +++LNY+ GAGLAMATMDIIKL+GG P
Sbjct: 1478 FRQQDLFALENNDTKDPREADALRFDLNYIXXXXXXXXXXXGAGLAMATMDIIKLNGGSP 1537
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGG V E + QAFRI+S D VK ILVNVFGGIVNCATIAKG++ A + +L I
Sbjct: 1538 ANFLDVGGSVKENQVYQAFRILSEDPKVKVILVNVFGGIVNCATIAKGIIAASHNLQLKI 1597
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLV+RLEGTNV E K++L ES L +I A+DLDEAA
Sbjct: 1598 PLVIRLEGTNVTEAKKLLAESNLSIITANDLDEAA 1632
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + +L IPLV+RLEGTNV E K++L ES L +I A+DLDEAA
Sbjct: 1583 AKGIIAASHNLQLKIPLVIRLEGTNVTEAKKLLAESNLSIITANDLDEAA 1632
>gi|308482626|ref|XP_003103516.1| hypothetical protein CRE_28780 [Caenorhabditis remanei]
gi|308259937|gb|EFP03890.1| hypothetical protein CRE_28780 [Caenorhabditis remanei]
Length = 415
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/380 (53%), Positives = 261/380 (68%), Gaps = 35/380 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKS--GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
EYV+KAQILAGGRG G F NG K GV+ T +++MIG +L+TKQT + G+
Sbjct: 61 EYVVKAQILAGGRGKGKFINGTKGIGGVYITKEKNAALEAIDEMIGKRLVTKQTTEEGVR 120
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V+KVM+A+ V+I RETY ++ DR NGPVV+ SP GG DIE VA KTP + PID+
Sbjct: 121 VDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPDRIFKTPIDIQ 180
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T+ A KIA L+F G+L AAT
Sbjct: 181 MGMTDGQAL---------------------------------KIAKDLQFEGNLLGAAAT 207
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
E+++L++LF++VDATQ+EINPLVET + V VDAK+NFDD+A +RQK IF+ E D
Sbjct: 208 EIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSASYRQKEIFAYETFEEHD 267
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PREVDA ++NLNY+GMDGNI CLVNGAGLAMATMD+IKLHGGEPANFLDVGG V E+++
Sbjct: 268 PREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTEDAVF 327
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
A RII+SD VKC+L+N+FGGIVNCATIA G+VNA L +P+VVRLEGTNV K
Sbjct: 328 NAVRIITSDPRVKCVLINIFGGIVNCATIANGVVNAVNKIGLKVPMVVRLEGTNVDAAKL 387
Query: 405 ILDESKLPLIFASDLDEAAS 424
I+ +S L ++ A++LDEAA+
Sbjct: 388 IMKKSGLTILTANNLDEAAA 407
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA L +P+VVRLEGTNV K I+ +S L ++ A++LDEAA
Sbjct: 357 ANGVVNAVNKIGLKVPMVVRLEGTNVDAAKLIMKKSGLTILTANNLDEAA 406
>gi|410951545|ref|XP_003982456.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Felis catus]
Length = 384
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/393 (52%), Positives = 271/393 (68%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A+ A K LN KE V+KAQILAGGRG G F +G K GVH T + Q + + ++MIG
Sbjct: 15 DSAKEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPQVVGQLAKQMIG 74
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 75 YNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAA 134
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P L+ ID+ +GI +S AQ ++A+
Sbjct: 135 SNPELIFKEEIDIIEGIKDSQAQ---------------------------------RMAE 161
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 162 NLGFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 221
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 222 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPAN 281
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 282 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELQLKVPL 341
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRLEGTNV E + IL S LP+ A DL++AA
Sbjct: 342 VVRLEGTNVHEAQNILSNSGLPITSAVDLEDAA 374
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++AA
Sbjct: 325 ANGITKACRELQLKVPLVVRLEGTNVHEAQNILSNSGLPITSAVDLEDAA 374
>gi|291393975|ref|XP_002713343.1| PREDICTED: succinate-CoA ligase, GDP-forming beta subunit
[Oryctolagus cuniculus]
Length = 432
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/392 (52%), Positives = 274/392 (69%), Gaps = 36/392 (9%)
Query: 33 ARTATNIL---KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
A TA+ L K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MI
Sbjct: 62 ANTASEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGQLAKQMI 121
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VA
Sbjct: 122 GYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVA 181
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A P L+ ID+ +GI +S AQ ++A
Sbjct: 182 ASNPELIFKEQIDIFEGIKDSQAQ---------------------------------RMA 208
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+ L F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEF
Sbjct: 209 ENLGFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEF 268
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PA
Sbjct: 269 RQKDIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPA 328
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLD+GGGV E + QAF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +P
Sbjct: 329 NFLDLGGGVKEAQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVP 388
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
LVVRLEGTNVQE +RIL+ S LP+ A DL++
Sbjct: 389 LVVRLEGTNVQEAQRILNNSGLPITSAVDLED 420
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE +RIL+ S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQRILNNSGLPITSAVDLED 420
>gi|74192578|dbj|BAE43068.1| unnamed protein product [Mus musculus]
gi|74196736|dbj|BAE43106.1| unnamed protein product [Mus musculus]
Length = 433
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/400 (51%), Positives = 275/400 (68%), Gaps = 40/400 (10%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDI 81
V +T K LE A K LN KE V+KAQILAGGRG G F++G K GVH T + + +
Sbjct: 62 VANTTKEALEAA-------KRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVV 114
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ ++MIG+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP G
Sbjct: 115 GELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQG 174
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VAA +P L+ ID+ +GI +S AQ
Sbjct: 175 GVDIEEVAASSPELIFKEQIDIFEGIKDSQAQ---------------------------- 206
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
++A+ L F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKI
Sbjct: 207 -----RMAENLGFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKI 261
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
NFDDNAEFRQK+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII
Sbjct: 262 NFDDNAEFRQKDIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDII 321
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
L+GG+PANFLD+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC
Sbjct: 322 FLNGGKPANFLDLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKAC 381
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 382 RELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 421
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 374 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 421
>gi|74191221|dbj|BAE39440.1| unnamed protein product [Mus musculus]
Length = 384
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/389 (51%), Positives = 271/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 17 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 76
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 77 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASS 136
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 137 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 163
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 164 GFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 223
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 224 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 283
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 284 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 343
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 344 RLEGTNVQEAQNILKSSGLPITSAVDLED 372
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 325 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 372
>gi|32484342|gb|AAH54425.1| Suclg2 protein [Mus musculus]
Length = 374
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/389 (51%), Positives = 271/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 7 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 66
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 67 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASS 126
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 127 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 153
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 154 GFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 213
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 214 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 273
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 274 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 333
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 334 RLEGTNVQEAQNILKSSGLPITSAVDLED 362
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 315 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 362
>gi|410291480|gb|JAA24340.1| succinate-CoA ligase, GDP-forming, beta subunit [Pan troglodytes]
Length = 432
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 271/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG+G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGIGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFIGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 392 RLEGTNVQEAQKILNNSGLPITSAIDLED 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
>gi|397480761|ref|XP_003811639.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Pan paniscus]
Length = 432
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 271/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S+LP+ A DL++
Sbjct: 392 RLEGTNVQEAQKILNNSRLPITSAIDLED 420
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S+LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSRLPITSAIDLED 420
>gi|320168660|gb|EFW45559.1| Suclg2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 424
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/392 (53%), Positives = 265/392 (67%), Gaps = 33/392 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+A+ LK + E+VIKAQI AGGRG G F +GFK GV T + + + KMIG+
Sbjct: 57 EAKDIAQWLKSNSVHEFVIKAQIHAGGRGKGTFSSGFKGGVQLTKDPNVVGDLASKMIGY 116
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
L+TKQTP G+ VNK+MVA++++I E YF IV DR GPV++ SP GG DIE VAAK
Sbjct: 117 NLVTKQTPPAGVPVNKLMVAEALDIASEKYFAIVLDRESQGPVLVASPQGGVDIEEVAAK 176
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP L+ P+ + G+T A +A L F G AKA +
Sbjct: 177 TPELIFKEPVKIAVGVTSEQALRLAKNLGFTG---AKATS-------------------- 213
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
AA ++++L++LF+ DA+Q+EINP+ ET + V+ DAK+N DDNAEFRQ
Sbjct: 214 ----------AADQIRRLYDLFIKNDASQVEINPMGETPDGRVVCFDAKVNIDDNAEFRQ 263
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K +F Q + +E DPREV+A+K LNYVGM+GNIGCLVNGAGLAMATMDIIKL GG+PANF
Sbjct: 264 KTLFEQRDTTEDDPREVEATKAGLNYVGMEGNIGCLVNGAGLAMATMDIIKLFGGQPANF 323
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGG V E + QAF+II+SD VK +LVN+FGGIVNCATIA G+V ACK+ LS+PLV
Sbjct: 324 LDVGGSVKEAQVAQAFKIITSDPQVKALLVNIFGGIVNCATIANGIVAACKTTNLSLPLV 383
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VRLEGTNV K+IL ES LP+I A +L++AA
Sbjct: 384 VRLEGTNVDNAKKILKESGLPIITAENLNDAA 415
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V ACK+ LS+PLVVRLEGTNV K+IL ES LP+I A +L++AA + A
Sbjct: 366 ANGIVAACKTTNLSLPLVVRLEGTNVDNAKKILKESGLPIITAENLNDAAQKAVAA 421
>gi|57100954|ref|XP_533767.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Canis lupus familiaris]
Length = 432
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE+V+KAQILAGGRG G F +G K GVH T + Q + + ++MIG+
Sbjct: 65 ANEALEAAKKLNAKEFVLKAQILAGGRGKGVFSSGLKGGVHLTKDPQVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ D+ NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIMEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIILLKGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+F GIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFAGIVNCAIIANGITKACQELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL S+LP+ A DL++AA
Sbjct: 392 RLEGTNVHEARNILSNSRLPITSAVDLEDAA 422
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL S+LP+ A DL++AA
Sbjct: 373 ANGITKACQELELKVPLVVRLEGTNVHEARNILSNSRLPITSAVDLEDAA 422
>gi|46329889|gb|AAH68602.1| SUCLG2 protein [Homo sapiens]
Length = 432
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/389 (52%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK+KAA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFVGPLKSKAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 392 RLEGTNVQEAQKILNNSGLPITSAIDLED 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
>gi|386780892|ref|NP_001248050.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Macaca mulatta]
gi|380817608|gb|AFE80678.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
isoform 2 precursor [Macaca mulatta]
gi|383422493|gb|AFH34460.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
isoform 2 precursor [Macaca mulatta]
Length = 432
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 269/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL S LP+ A DL++
Sbjct: 392 RLEGTNVQEAQKILSNSGLPITSAVDLED 420
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQKILSNSGLPITSAVDLED 420
>gi|403298968|ref|XP_003940267.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Saimiri boliviensis boliviensis]
Length = 469
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/391 (52%), Positives = 271/391 (69%), Gaps = 33/391 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG
Sbjct: 100 DTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIG 159
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 160 YNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAA 219
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P L+ ID+ +GI +S AQ +A+ L F G LK++AA ++ KL+N
Sbjct: 220 SNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYN------------ 267
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
LFL VDATQ+E+NP ET E +V+S DAKINFDDNAEFR
Sbjct: 268 ---------------------LFLKVDATQVEVNPFGETPEGQVVSFDAKINFDDNAEFR 306
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 307 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPAN 366
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 367 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 426
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
VVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 427 VVRLEGTNVQEAQKILNNSGLPITSAVDLED 457
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 410 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAVDLED 457
>gi|51593317|gb|AAH80781.1| Succinate-Coenzyme A ligase, GDP-forming, beta subunit [Mus
musculus]
Length = 433
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/389 (51%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 66 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 125
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 126 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASS 185
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+
Sbjct: 186 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENP 212
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 213 GFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 273 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 332
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 333 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 392
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 393 RLEGTNVQEAQNILKSSGLPITSAVDLED 421
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 374 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 421
>gi|332261159|ref|XP_003279643.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial isoform 1 [Nomascus leucogenys]
Length = 432
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 392 RLEGTNVQEAQKILNNSGLPITSAIDLED 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
>gi|114587760|ref|XP_516570.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial isoform 2 [Pan troglodytes]
gi|410257778|gb|JAA16856.1| succinate-CoA ligase, GDP-forming, beta subunit [Pan troglodytes]
Length = 432
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFIGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 392 RLEGTNVQEAQKILNNSGLPITSAIDLED 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
>gi|157779135|ref|NP_003839.2| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
isoform 2 precursor [Homo sapiens]
gi|52788292|sp|Q96I99.2|SUCB2_HUMAN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial; AltName: Full=GTP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-G chain; Short=SCS-betaG; Flags:
Precursor
gi|119585860|gb|EAW65456.1| succinate-CoA ligase, GDP-forming, beta subunit, isoform CRA_a
[Homo sapiens]
gi|119585861|gb|EAW65457.1| succinate-CoA ligase, GDP-forming, beta subunit, isoform CRA_a
[Homo sapiens]
Length = 432
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 392 RLEGTNVQEAQKILNNSGLPITSAIDLED 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
>gi|338714521|ref|XP_001495054.3| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Equus caballus]
Length = 384
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 270/391 (69%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 17 ANEALEAAKKLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYN 76
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 77 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRASNGPVLVGSPQGGVDIEEVAATN 136
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 137 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 163
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 164 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 223
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 224 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 283
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 284 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 343
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL+ S LP+ A DL++AA
Sbjct: 344 RLEGTNVHEAQNILNNSGLPITSAVDLEDAA 374
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL+ S LP+ A DL++AA
Sbjct: 325 ANGITKACRELELKVPLVVRLEGTNVHEAQNILNNSGLPITSAVDLEDAA 374
>gi|188038847|gb|ACD47037.1| ASL1/Suclg2 fusion protein [Mus musculus]
Length = 414
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/389 (51%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 47 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 106
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 107 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASS 166
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+
Sbjct: 167 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENP 193
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 194 GFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 253
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 254 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 313
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 314 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 373
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 374 RLEGTNVQEAQNILKSSGLPITSAVDLED 402
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 355 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 402
>gi|326928102|ref|XP_003210222.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like, partial [Meleagris gallopavo]
Length = 460
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/391 (51%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A + L KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG
Sbjct: 91 DSADDALEAAQRLKAKEIVLKAQILAGGRGKGTFNSGLKGGVHLTKDPKTVEQLAKQMIG 150
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ V KVMVA+++NI+RETYF I+ DR NGPV++ SP GG DIE VAA
Sbjct: 151 YNLSTKQTPKDGVKVKKVMVAEALNISRETYFAILMDRACNGPVMVGSPQGGVDIEEVAA 210
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P L+ ID+ +GI + A +A L F+G L+ +AA +++KL+N
Sbjct: 211 TSPELIFKEEIDIFEGIQDHQALQMAKNLGFKGPLQQQAADQIKKLYN------------ 258
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 259 ---------------------LFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 297
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 298 QKEIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPAN 357
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 358 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 417
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
VVRLEGTNV E +RIL+ES LP+ ASDL++
Sbjct: 418 VVRLEGTNVHEAQRILNESGLPITSASDLED 448
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E +RIL+ES LP+ ASDL++
Sbjct: 401 ANGITKACRELELKVPLVVRLEGTNVHEAQRILNESGLPITSASDLED 448
>gi|148708892|gb|EDL40839.1| mCG49734 [Mus musculus]
Length = 433
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/389 (51%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 66 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 125
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VA +
Sbjct: 126 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAVSS 185
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 186 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 212
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 213 GFLGSLKNQAADQIKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 273 DIFAMDDKSENEPIENEAARYDLKYIGLDGNITCFVNGAGLAMATCDIIFLNGGKPANFL 332
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 333 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 392
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + I S LP+ A DL++
Sbjct: 393 RLEGTNVQEAQNIFKSSGLPITSAVDLED 421
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + I S LP+ A DL++
Sbjct: 374 ANGITKACRELELKVPLVVRLEGTNVQEAQNIFKSSGLPITSAVDLED 421
>gi|327266166|ref|XP_003217877.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Anolis carolinensis]
Length = 424
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/389 (51%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L E V+KAQILAGGRG G F +G K GVH + +++ + E+MIG+
Sbjct: 57 ANDALEAAKRLKATEIVLKAQILAGGRGKGVFSSGLKGGVHLMKDPKEVGKLAEQMIGYN 116
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQTPK G+ V KVMVA+++NI+RETYF I+ DR NGPV++ SP+GG DIE VAA +
Sbjct: 117 LITKQTPKDGVKVKKVMVAEALNISRETYFAILMDRACNGPVLVGSPAGGVDIEEVAATS 176
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +G+ ++ A ++A+ L
Sbjct: 177 PELIFKEEIDIFEGVKDTQAL---------------------------------RLAENL 203
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F+G LK +AA +++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 204 GFKGPLKQQAADQIKKLYSLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 263
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
IF+ ++ SE++P E +A+ Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 264 EIFAMDDKSENEPIENEAALYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFL 323
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 324 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 383
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E +RIL+ES LP+ ASDL++
Sbjct: 384 RLEGTNVHEAQRILNESGLPITSASDLED 412
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E +RIL+ES LP+ ASDL++
Sbjct: 365 ANGITKACRELELKVPLVVRLEGTNVHEAQRILNESGLPITSASDLED 412
>gi|296225621|ref|XP_002758579.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Callithrix jacchus]
Length = 432
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/389 (51%), Positives = 269/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKKLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E ++IL+ S LP+ A DL++
Sbjct: 392 RLEGTNVHEAQKILNNSGLPITSAVDLED 420
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E ++IL+ S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAQKILNNSGLPITSAVDLED 420
>gi|17539378|ref|NP_501266.1| Protein SUCG-1 [Caenorhabditis elegans]
gi|1710876|sp|P53589.1|SUCB2_CAEEL RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
beta, mitochondrial; AltName: Full=Succinyl-CoA
synthetase beta chain; Short=SCS-beta; Flags: Precursor
gi|351059873|emb|CCD67452.1| Protein SUCG-1 [Caenorhabditis elegans]
Length = 415
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/380 (53%), Positives = 260/380 (68%), Gaps = 35/380 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKS--GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
EYV+KAQILAGGRG G F NG K GV T +++MIG +L+TKQT G+
Sbjct: 61 EYVVKAQILAGGRGKGKFINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVR 120
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V+KVM+A+ V+I RETY ++ DR NGPVV+ SP GG DIE VA KTP + PID+
Sbjct: 121 VDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQ 180
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+TE Q L KIA L+F G L AA
Sbjct: 181 MGMTEG-----------------------QSL----------KIAKDLQFEGKLIGVAAQ 207
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
E+++L++LF++VDATQ+EINPLVET + V VDAK+NFDD+A +RQK IF+ E D
Sbjct: 208 EIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSAAYRQKEIFAYETFEEHD 267
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PREVDA ++NLNY+GMDGNI CLVNGAGLAMATMD+IKLHGGEPANFLDVGG V E+++
Sbjct: 268 PREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTEDAVF 327
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
A RII+SD VKC+L+N+FGGIVNCATIA G+V+A L++P+VVRLEGTNV K+
Sbjct: 328 NAVRIITSDPRVKCVLINIFGGIVNCATIANGVVSAVNKIGLNVPMVVRLEGTNVDAAKQ 387
Query: 405 ILDESKLPLIFASDLDEAAS 424
I+ +S L ++ A++LDEAA+
Sbjct: 388 IMKKSGLKILTANNLDEAAA 407
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V+A L++P+VVRLEGTNV K+I+ +S L ++ A++LDEAA
Sbjct: 357 ANGVVSAVNKIGLNVPMVVRLEGTNVDAAKQIMKKSGLKILTANNLDEAA 406
>gi|148237470|ref|NP_001089908.1| succinate-CoA ligase, GDP-forming, beta subunit [Xenopus laevis]
gi|83318262|gb|AAI08803.1| MGC132166 protein [Xenopus laevis]
Length = 431
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/396 (51%), Positives = 264/396 (66%), Gaps = 33/396 (8%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
+ ++A A K L +E V+KAQILAGGRG G FD+G K GVH T + + + ++
Sbjct: 59 IVADNASEALEAAKKLKAREIVLKAQILAGGRGKGTFDSGLKGGVHLTKDPSKVEELTKQ 118
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIG L TKQT G+ V KVMVA++++ITRETY I+ DR NGPV++ SP GG DIE
Sbjct: 119 MIGFNLTTKQTAAGGVKVQKVMVAEALDITRETYLAILMDRACNGPVLVGSPQGGMDIEE 178
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA KTP L+ ID+ +G+ + A +AD L F+G L+ +AA ++++L+
Sbjct: 179 VAEKTPELIFKEEIDIFEGVKDCQALRMADNLGFKGPLQQQAAEQIKRLY---------- 228
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+LFL VDATQ+EINP ET E +V+ DAKINFDDNA
Sbjct: 229 -----------------------DLFLKVDATQVEINPFGETPEGQVVCFDAKINFDDNA 265
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK IF+ + E DP E +A+ Y+L Y+G+DGNI C VNGAGLAMAT DII LHGG+
Sbjct: 266 EFRQKEIFAMDNTLEMDPIENEANSYDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGK 325
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L
Sbjct: 326 PANFLDLGGGVKESQVYQAFKLLTADPRVEAILVNIFGGIVNCAIIANGITKACRELELK 385
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+PLVVRLEGTNV E KRIL ES LP+ A+DLD+AA
Sbjct: 386 VPLVVRLEGTNVHEAKRILAESGLPITSANDLDDAA 421
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A+DLD+AA
Sbjct: 372 ANGITKACRELELKVPLVVRLEGTNVHEAKRILAESGLPITSANDLDDAA 421
>gi|3766203|gb|AAC64399.1| GTP-specific succinyl-CoA synthetase beta subunit [Mus musculus]
Length = 404
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/389 (51%), Positives = 271/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 37 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 96
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP G +DIE VAA +
Sbjct: 97 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVLVGSPQGRSDIEEVAASS 156
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 157 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 183
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 184 GFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 243
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 244 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 303
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 304 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 363
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 364 RLEGTNVQEAQNILKSSGLPITSAVDLED 392
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 345 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 392
>gi|348510544|ref|XP_003442805.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Oreochromis niloticus]
Length = 431
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/381 (51%), Positives = 263/381 (69%), Gaps = 33/381 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G FD+G K GVH T + + + KM+G
Sbjct: 65 ASEALEAAKRLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPAVVGELANKMLGFN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ V VMVA++++ITRETYF I+ DR NGPV++ SP GG DIE VAA T
Sbjct: 125 LTTKQTPKEGVKVKTVMVAEALDITRETYFAILMDRSCNGPVMVGSPQGGMDIEEVAAST 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +G+ + A ++A L
Sbjct: 185 PELIFKEAIDIFEGVRDDQAL---------------------------------RMAANL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F+G L+ +AA ++++L++LFL VDATQ+E+NPL ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFKGALQRQAADQIKRLYDLFLKVDATQVEVNPLGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++F+ ++++E+DP E+ A+K++L Y+G+DGNI C VNGAGLAMAT DII LHGG+PANFL
Sbjct: 272 SVFAMDDMTEADPTEMAAAKWDLKYIGLDGNIACFVNGAGLAMATCDIIDLHGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E+ + +AF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEKQVYEAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPL 413
RLEGTNV E KRIL ES LP+
Sbjct: 392 RLEGTNVHEAKRILTESGLPI 412
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAKRILTESGLPI 412
>gi|449677641|ref|XP_002157521.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Hydra magnipapillata]
Length = 425
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/393 (51%), Positives = 264/393 (67%), Gaps = 34/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E A+ +++ D E VIKAQILAGGRG G F+NGFK GV T +V + I KM+G
Sbjct: 60 EAAKIGRSLMAD-TADELVIKAQILAGGRGKGVFENGFKGGVKLTKDVNTVEDIASKMLG 118
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+L TKQTP G+ V K+MV +S+ ITRETY I+ DR NGPV++ SP GG DIE VA
Sbjct: 119 FRLTTKQTPPNGVLVKKLMVCESLTITRETYIAILMDREANGPVIVASPEGGVDIEEVAE 178
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
K P + ID+ +G+T A I+ FL FQG +A+ ++++L+
Sbjct: 179 KNPSKILKENIDIEKGVTLEQADRISTFLNFQGKKHTQASLQIRRLY------------- 225
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
NLF VDA Q+EINP ETD+ EV+ DAKINFDDNA+FR
Sbjct: 226 --------------------NLFNGVDAVQVEINPFGETDKDEVVCFDAKINFDDNAKFR 265
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF ++ SE+DPRE++A KYNLNY+ +DGNI C+VNGAGLAMATMDIIKL+GG PAN
Sbjct: 266 QKAIFEMDDHSEADPRELEADKYNLNYIPLDGNIACMVNGAGLAMATMDIIKLNGGWPAN 325
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + F++++SD V+CILVN+FGGIV+CA IA+G+ A +S LS+P+
Sbjct: 326 FLDLGGGVTENGVYHGFKLLTSDPKVRCILVNIFGGIVDCAVIARGITKAYQSMNLSVPV 385
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRLEGTNV E KRIL ES++P+ A +LD+AA
Sbjct: 386 VVRLEGTNVDEAKRILTESQMPIKTAENLDDAA 418
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + A +S LS+P+VVRLEGTNV E KRIL ES++P+ A +LD+AA
Sbjct: 369 ARGITKAYQSMNLSVPVVVRLEGTNVDEAKRILTESQMPIKTAENLDDAA 418
>gi|28422556|gb|AAH47024.1| Succinate-CoA ligase, GDP-forming, beta subunit [Homo sapiens]
gi|133777003|gb|AAH07716.3| Succinate-CoA ligase, GDP-forming, beta subunit [Homo sapiens]
Length = 384
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 17 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 76
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 77 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 136
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 137 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 163
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 164 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 223
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 224 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 283
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 284 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 343
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 344 RLEGTNVQEAQKILNNSGLPITSAIDLED 372
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 325 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 372
>gi|410920155|ref|XP_003973549.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Takifugu rubripes]
Length = 431
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/392 (51%), Positives = 268/392 (68%), Gaps = 36/392 (9%)
Query: 33 ARTATNIL---KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
A TA++ L K LN E V+KAQILAGGRG G FD+G K GVH T + + + KM+
Sbjct: 62 ANTASDALDAAKRLNANEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPAVVGDLASKML 121
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L TKQT + G+ V VMVA++++I+RETYF I+ DR +NGPV++ SP GG DIE VA
Sbjct: 122 GFNLRTKQTSEEGVKVKTVMVAEALDISRETYFAILMDRSYNGPVMVGSPQGGVDIEEVA 181
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A P L+ ID+ +G+ + A ++A
Sbjct: 182 ASNPELIFKEVIDIFEGVRDDQAL---------------------------------RMA 208
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L F+G L+ +AA ++++L++LFL VDATQ+E+NP ET E +V+ DAKINFDDNAEF
Sbjct: 209 ANLGFKGALQRQAADQIKRLYDLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEF 268
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK++F+ +++SESDP E +A+K+ L Y+GMDGNI C VNGAGLAMAT DII LHGG+PA
Sbjct: 269 RQKDVFAMDDMSESDPIETEAAKWGLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPA 328
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLD+GGGV E + +AF+++S+DS V+ ILVN+FGGIVNCA IA G+ AC+ +L +P
Sbjct: 329 NFLDLGGGVQERQVYEAFKLLSADSKVEAILVNIFGGIVNCAIIANGITKACRELELKVP 388
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
LVVRLEGTNV E KRIL ES LP+ A +LD+
Sbjct: 389 LVVRLEGTNVHEAKRILTESGLPITAAENLDD 420
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A +LD+
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAKRILTESGLPITAAENLDD 420
>gi|395824623|ref|XP_003785560.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Otolemur garnettii]
Length = 384
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/391 (52%), Positives = 271/391 (69%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 17 ANEALEAAKKLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGQLAKQMIGYN 76
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 77 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 136
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ++A+ L
Sbjct: 137 PELIFKEQIDIFEGIK---------------------------------NSQAQRMAENL 163
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL VDATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 164 GFLGPLKNQAADQIKKLYNLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 223
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 224 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 283
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 284 DLGGGVKETQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 343
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNVQE + IL S L ++ A DL++AA
Sbjct: 344 RLEGTNVQEAQNILRNSGLRIMSAVDLEDAA 374
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNVQE + IL S L ++ A DL++AA
Sbjct: 325 ANGITKACRELELKVPLVVRLEGTNVQEAQNILRNSGLRIMSAVDLEDAA 374
>gi|164669|gb|AAA31120.1| succinyl-CoA synthetase beta-subunit, partial [Sus scrofa]
Length = 417
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 50 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYN 109
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 110 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 169
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 170 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 196
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G L+ +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 197 GFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 256
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 257 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 316
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 317 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 376
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL S LP+ A DL++AA
Sbjct: 377 RLEGTNVHEAQNILTNSGLPITSAVDLEDAA 407
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++AA
Sbjct: 358 ANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAA 407
>gi|73909235|gb|AAH35149.1| SUCLG2 protein, partial [Homo sapiens]
Length = 362
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/381 (52%), Positives = 268/381 (70%), Gaps = 33/381 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+ L TKQTPK
Sbjct: 3 KRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPK 62
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA P L+
Sbjct: 63 EGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQ 122
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID+ +GI +S AQ ++A+ L F G LK+
Sbjct: 123 IDIFEGIKDSQAQ---------------------------------RMAENLGFVGPLKS 149
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK+IF+ ++
Sbjct: 150 QAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDK 209
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFLD+GGGV E
Sbjct: 210 SENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKE 269
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
+ QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVVRLEGTNVQ
Sbjct: 270 AQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQ 329
Query: 401 EGKRILDESKLPLIFASDLDE 421
E ++IL+ S LP+ A DL++
Sbjct: 330 EAQKILNNSGLPITSAIDLED 350
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 303 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 350
>gi|21264506|sp|P53590.2|SUCB2_PIG RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial; AltName: Full=GTP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-G chain; Short=SCS-betaG; Flags:
Precursor
Length = 433
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 66 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYN 125
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 126 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 185
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 186 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 212
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G L+ +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 213 GFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 273 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 332
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 333 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 392
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL S LP+ A DL++AA
Sbjct: 393 RLEGTNVHEAQNILTNSGLPITSAVDLEDAA 423
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++AA
Sbjct: 374 ANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAA 423
>gi|90109555|pdb|2FP4|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
Synthetase In Complex With Gtp
gi|90109573|pdb|2FPG|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
Synthetase In Complex With Gdp
gi|90109575|pdb|2FPI|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
Synthetase From Polyethylene Glycol
gi|90109583|pdb|2FPP|B Chain B, Crystal Structure Of Pig Gtp-Specific Succinyl-Coa
Synthetase From Polyethylene Glycol With Chloride Ions
Length = 395
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 28 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYN 87
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 88 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 147
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 148 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 174
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G L+ +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 175 GFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 234
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 235 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 294
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 295 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 354
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL S LP+ A DL++AA
Sbjct: 355 RLEGTNVHEAQNILTNSGLPITSAVDLEDAA 385
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++AA
Sbjct: 336 ANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAA 385
>gi|348575616|ref|XP_003473584.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Cavia porcellus]
Length = 430
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/389 (51%), Positives = 267/389 (68%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 63 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 122
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVM+A++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 123 LATKQTPKEGVKVNKVMIAEALDISRETYLAILMDRACNGPVLVGSPQGGVDIEEVAASN 182
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ PID+ +GI +S AQ ++A+ L
Sbjct: 183 PELIFKEPIDIFEGIKDSQAQ---------------------------------RMAENL 209
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 210 GFLGSLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 269
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 270 EIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 329
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 330 DLGGGVKESQVYHAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 389
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 390 RLEGTNVQEAQNILRNSGLPITAAVDLED 418
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 371 ANGITKACRELELKVPLVVRLEGTNVQEAQNILRNSGLPITAAVDLED 418
>gi|57524960|ref|NP_001006141.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Gallus gallus]
gi|53130454|emb|CAG31556.1| hypothetical protein RCJMB04_7p8 [Gallus gallus]
Length = 432
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/391 (50%), Positives = 268/391 (68%), Gaps = 33/391 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A + L KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG
Sbjct: 63 DSADDALEAAQRLKAKEIVLKAQILAGGRGKGTFNSGLKGGVHLTKDPKTVAQLAKQMIG 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ V KVMVA+++NI+RETYF I+ DR NGPV++ SP GG DIE VA
Sbjct: 123 YNLSTKQTPKDGVKVKKVMVAEALNISRETYFAILMDRACNGPVMVGSPQGGVDIEEVAV 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P L+ ID+ +G+ + A +A L F+G L+ +AA +++KL+N
Sbjct: 183 TSPELIFKEEIDIFEGVQDHQALQMAKNLGFKGPLQQQAADQIKKLYN------------ 230
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 231 ---------------------LFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 270 QKEIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 330 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 389
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
VVRLEGTNV E +RIL+ES LP+ ASDL++
Sbjct: 390 VVRLEGTNVHEAQRILNESGLPITSASDLED 420
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E +RIL+ES LP+ ASDL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAQRILNESGLPITSASDLED 420
>gi|395816528|ref|XP_003781753.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Otolemur garnettii]
Length = 432
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 271/391 (69%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 65 ANEALEAAKKLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP+GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPTGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIK---------------------------------NSQAQRMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL VDATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFLGPLKNQAADQIKKLYNLFLKVDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GG V E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGRVKETQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNVQE + IL S L ++ A DL++AA
Sbjct: 392 RLEGTNVQEAQNILSNSGLHIMSAVDLEDAA 422
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNVQE + IL S L ++ A DL++AA
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQNILSNSGLHIMSAVDLEDAA 422
>gi|3766199|gb|AAC64397.1| GTP-specific succinyl-CoA synthetase beta subunit [Homo sapiens]
Length = 404
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/389 (51%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 37 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 96
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP G +DIE VAA
Sbjct: 97 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGRSDIEEVAASN 156
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 157 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 183
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 184 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 243
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 244 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 303
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 304 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 363
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 364 RLEGTNVQEAQKILNNSGLPITSAIDLED 392
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 345 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 392
>gi|198432563|ref|XP_002131966.1| PREDICTED: similar to succinate-Coenzyme A ligase, GDP-forming,
beta subunit [Ciona intestinalis]
Length = 432
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/420 (50%), Positives = 273/420 (65%), Gaps = 38/420 (9%)
Query: 9 IANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGF 68
+ NF V+ V S DA+ A + D N KE V+KA ILAGGRG G F +G
Sbjct: 47 MENFDVNVQRFKVVESA-----ADAKNAAQHILDTNAKELVVKAMILAGGRGKGKFSSGL 101
Query: 69 KSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDR 128
+ GVH T + + + + M+G+ L+TKQT G+ V K+MVA++++ITRETYF I+ DR
Sbjct: 102 QGGVHLTTDPTKVSDLCKDMLGYNLVTKQTSAEGVTVKKIMVAEALDITRETYFAILMDR 161
Query: 129 LHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAK 188
+ GPV++ SP+GG DIE VA KTPHL+ PID+ +GI ES A
Sbjct: 162 SYMGPVMVGSPAGGMDIEEVAEKTPHLIFKDPIDIDKGIQESQAI--------------- 206
Query: 189 AATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVE 248
K+A+ L F G+ KAA ++ KL+ LF+SVDATQ+EINPL E
Sbjct: 207 ------------------KMAENLGFTGEKLQKAAEQITKLYKLFISVDATQVEINPLGE 248
Query: 249 TDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLV 308
T + +V+ DAK+NFDDNAEFRQK IF ++ SESDP+EV A + L+Y+ MDGNI CLV
Sbjct: 249 TPDGDVVCFDAKVNFDDNAEFRQKEIFLMDDKSESDPKEVVAEENGLSYISMDGNIACLV 308
Query: 309 NGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIV 368
NGAGLAMATMDII+ GG PANFLD+GGGV E + QAF+I+ SD+ V+ ILVN+FGGIV
Sbjct: 309 NGAGLAMATMDIIQHCGGRPANFLDLGGGVQEHQVYQAFKIVLSDTKVEAILVNIFGGIV 368
Query: 369 NCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
+C IA G+V A K +S+PLVVRLEG NV E K IL ES LP++ A+D +AA V A
Sbjct: 369 DCKIIANGIVKAGKELNISMPLVVRLEGMNVNEAKEILKESNLPIVSANDFGDAAEKVVA 428
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K +S+PLVVRLEG NV E K IL ES LP++ A+D +AA
Sbjct: 374 ANGIVKAGKELNISMPLVVRLEGMNVNEAKEILKESNLPIVSANDFGDAA 423
>gi|432093454|gb|ELK25522.1| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial,
partial [Myotis davidii]
Length = 357
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/376 (52%), Positives = 265/376 (70%), Gaps = 33/376 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+ L TKQTPK G+ V
Sbjct: 3 KEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYNLTTKQTPKEGVKV 62
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
NK+MVA+++NI+RETYF I+ DR NGPV++ SP GG DIE VAA +P L+ ID+ +
Sbjct: 63 NKLMVAEALNISRETYFAILMDRSCNGPVLVGSPQGGMDIEEVAASSPELIFKEQIDIME 122
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI +S AQ ++A+ L F G LK +AA E
Sbjct: 123 GIKDSQAQ---------------------------------RMAENLGFLGPLKNQAADE 149
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK+IF+ ++ SE++P
Sbjct: 150 IKKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDGSENEP 209
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFLD+GGGV E + Q
Sbjct: 210 IENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVQEAQVYQ 269
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVVRLEGTNV E +RI
Sbjct: 270 AFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAQRI 329
Query: 406 LDESKLPLIFASDLDE 421
L S LP+ A DL++
Sbjct: 330 LGSSGLPITSAVDLED 345
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E +RIL S LP+ A DL++
Sbjct: 298 ANGITKACRELELKVPLVVRLEGTNVHEAQRILGSSGLPITSAVDLED 345
>gi|28175163|gb|AAH43312.1| Suclg2 protein [Mus musculus]
Length = 355
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/376 (52%), Positives = 265/376 (70%), Gaps = 33/376 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+ L TKQTPK G+ V
Sbjct: 1 KEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKV 60
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
NKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +P L+ ID+ +
Sbjct: 61 NKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFE 120
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI +S AQ ++A+ L F G LK +AA +
Sbjct: 121 GIKDSQAQ---------------------------------RMAENLGFLGSLKNQAADQ 147
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK+IF+ ++ SE++P
Sbjct: 148 ITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEP 207
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFLD+GGGV E + +
Sbjct: 208 IENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYE 267
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVVRLEGTNVQE + I
Sbjct: 268 AFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQNI 327
Query: 406 LDESKLPLIFASDLDE 421
L S LP+ A DL++
Sbjct: 328 LKSSGLPITSAVDLED 343
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 296 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 343
>gi|82225354|sp|Q9YI36.1|SUCB2_COLLI RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial; AltName: Full=GTP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-G chain; Short=SCS-betaG
gi|3821929|gb|AAC69706.1| GTP-specific succinyl-CoA synthetase beta subunit [Columba livia]
Length = 391
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/391 (50%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A + L KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG
Sbjct: 22 DSANDALEAAQRLKAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKIVEQLAKQMIG 81
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ V KVMVA+++NI+RETYF I+ DR NGPV++ SP GG DIE VA
Sbjct: 82 YNLSTKQTPKDGVTVKKVMVAEALNISRETYFAILMDRACNGPVMVGSPQGGVDIEEVAV 141
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P L+ ID+ +GI + A +A L F+G L+ +AA +++KL+N
Sbjct: 142 TSPELIFKEEIDIFEGIKDHQALQMAKNLGFKGPLQQQAADQIKKLYN------------ 189
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 190 ---------------------LFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 228
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 229 QKEIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPAN 288
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 289 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKVPL 348
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
VVRLEGTNV E +RIL+ES LP++ A+DL++
Sbjct: 349 VVRLEGTNVHEAQRILNESGLPIMSANDLED 379
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E +RIL+ES LP++ A+DL++
Sbjct: 332 ANGITRACRELELKVPLVVRLEGTNVHEAQRILNESGLPIMSANDLED 379
>gi|449278761|gb|EMC86530.1| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Columba livia]
Length = 384
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/391 (50%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A + L KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG
Sbjct: 15 DSANDALEAAQRLKAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKIVEQLAKQMIG 74
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ V KVMVA+++NI+RETYF I+ DR NGPV++ SP GG DIE VA
Sbjct: 75 YNLSTKQTPKDGVTVKKVMVAEALNISRETYFAILMDRACNGPVMVGSPQGGVDIEEVAV 134
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P L+ ID+ +G+ + A +A L F+G L+ +AA +++KL+N
Sbjct: 135 TSPELIFKEEIDIFEGMKDHQALQMAKNLGFKGPLQQQAADQIKKLYN------------ 182
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 183 ---------------------LFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 221
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 222 QKEIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPAN 281
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 282 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKVPL 341
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
VVRLEGTNV E +RIL+ES LP++ A+DL++
Sbjct: 342 VVRLEGTNVHEAQRILNESGLPIMSANDLED 372
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E +RIL+ES LP++ A+DL++
Sbjct: 325 ANGITRACRELELKVPLVVRLEGTNVHEAQRILNESGLPIMSANDLED 372
>gi|9955020|pdb|1EUC|B Chain B, Crystal Structure Of Dephosphorylated Pig Heart, Gtp-
Specific Succinyl-Coa Synthetase
Length = 396
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/391 (51%), Positives = 268/391 (68%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 29 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYN 88
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 89 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 148
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 149 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 175
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G L+ +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 176 GFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 235
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 236 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 295
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVN A IA G+ AC+ +L +PLVV
Sbjct: 296 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNXAIIANGITKACRELELKVPLVV 355
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL S LP+ A DL++AA
Sbjct: 356 RLEGTNVHEAQNILTNSGLPITSAVDLEDAA 386
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++AA
Sbjct: 337 ANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAA 386
>gi|417400839|gb|JAA47342.1| Putative succinyl-coa synthetase beta subunit [Desmodus rotundus]
Length = 432
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/392 (50%), Positives = 270/392 (68%), Gaps = 33/392 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
++ A A K LN KE V+KAQILAGGRG G F +G K GVH + + + + + ++MI
Sbjct: 62 VDTANEALEAAKKLNAKEIVLKAQILAGGRGKGIFSSGLKGGVHLSKDPKVVGQLAKQMI 121
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VA
Sbjct: 122 GYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVA 181
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A P L+ ID+ G+ +S AQ ++A
Sbjct: 182 ASNPELIFKEQIDIIDGVKDSQAQ---------------------------------RMA 208
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+ L F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEF
Sbjct: 209 ENLGFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEF 268
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PA
Sbjct: 269 RQKDIFAMDDRSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPA 328
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLD+GGGV E + QAFR++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +P
Sbjct: 329 NFLDLGGGVKEAQVYQAFRLLTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVP 388
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
LVVRLEGTNV E ++IL+ S LP+ A +L++
Sbjct: 389 LVVRLEGTNVHEAQKILNNSGLPITSAVNLED 420
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E ++IL+ S LP+ A +L++
Sbjct: 373 ANGITKACQELELKVPLVVRLEGTNVHEAQKILNNSGLPITSAVNLED 420
>gi|146231894|gb|ABQ13022.1| similar to Succinyl-CoA ligase [GDP-forming] beta-chain,
mitochondrial precursor (Succinyl-CoA synthetase, betaG
chain) (SCS-betaG) (GTP-specific succinyl-CoA synthetase
beta subunit) [Bos taurus]
Length = 432
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/389 (51%), Positives = 266/389 (68%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 65 ASEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ V KVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVKKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E + IL S LP+ A DL++
Sbjct: 392 RLEGTNVHEAQNILSNSGLPITSAVDLED 420
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAQNILSNSGLPITSAVDLED 420
>gi|77736229|ref|NP_001029811.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
precursor [Bos taurus]
gi|91208175|sp|Q3MHX5.1|SUCB2_BOVIN RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial; AltName: Full=GTP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-G chain; Short=SCS-betaG; Flags:
Precursor
gi|75773452|gb|AAI04560.1| Succinate-CoA ligase, GDP-forming, beta subunit [Bos taurus]
gi|296474979|tpg|DAA17094.1| TPA: succinate-CoA ligase, GDP-forming beta subunit precursor [Bos
taurus]
Length = 432
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/389 (51%), Positives = 266/389 (68%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ V KVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVKKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E + IL S LP+ A DL++
Sbjct: 392 RLEGTNVHEAQNILSNSGLPITSAVDLED 420
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAQNILSNSGLPITSAVDLED 420
>gi|426249303|ref|XP_004018389.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Ovis aries]
Length = 432
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/389 (51%), Positives = 265/389 (68%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 65 ASEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ V KVMVA++++I+RETY I+ DR NGPV++ SP GG DIE V A
Sbjct: 125 LATKQTPKEGVKVKKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVTASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIIEGIKDSQAQ---------------------------------QMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E + IL S LP+ A DL++
Sbjct: 392 RLEGTNVHEAQNILSNSGLPITSAVDLED 420
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAQNILSNSGLPITSAVDLED 420
>gi|156392365|ref|XP_001636019.1| predicted protein [Nematostella vectensis]
gi|156223118|gb|EDO43956.1| predicted protein [Nematostella vectensis]
Length = 435
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/387 (49%), Positives = 260/387 (67%), Gaps = 33/387 (8%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
+ E+ + + K LN EYVIKAQILAGGRG G FD+G GVH T ++ K
Sbjct: 64 IVAENPEESVRLSKKLNAAEYVIKAQILAGGRGKGTFDSGLNGGVHLTKLADEVGYFTAK 123
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M G++L TKQTP G+ VNKVMVA++ +I RETY I+ DR GPV++ SP GG DIE
Sbjct: 124 MFGYRLKTKQTPPEGVMVNKVMVAEAYDIERETYLAILMDREFMGPVIVASPKGGMDIEE 183
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + +P+D+ +G+ + A W
Sbjct: 184 VAKTTPEYIYKVPVDITKGLQDKDAS-----------------------W---------- 210
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A+ LEF+G+L +A ++++L+++FL VDATQ+EINP ET + +V+ DAK NFDDNA
Sbjct: 211 LAEKLEFKGELHKQATEQIKRLYDVFLKVDATQVEINPFGETPDGKVVCFDAKFNFDDNA 270
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
++RQK IF ++ SESDPREV+A++++L+Y+ MDGNI CLVNGAGLAMATMDIIKLHGGE
Sbjct: 271 KYRQKAIFDLDDKSESDPREVEAAEFDLSYIAMDGNIACLVNGAGLAMATMDIIKLHGGE 330
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
P+NFLD+GGG+ EE ++ A +I+S D VK ILVN+FGGIV+C+ +A G+ A + KL
Sbjct: 331 PSNFLDLGGGIKEEGVLHALKIVSKDPRVKVILVNIFGGIVDCSVVASGITKAYEKLKLD 390
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLI 414
+P+VVRLEG NV + + IL+ES +PLI
Sbjct: 391 VPIVVRLEGNNVDKAQHILEESGMPLI 417
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A+ + A + KL +P+VVRLEG NV + + IL+ES +PLI
Sbjct: 377 ASGITKAYEKLKLDVPIVVRLEGNNVDKAQHILEESGMPLI 417
>gi|340376153|ref|XP_003386598.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Amphimedon queenslandica]
Length = 436
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/384 (51%), Positives = 260/384 (67%), Gaps = 33/384 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+L E V+KAQILAGGRG G F +G GV T +++ I + MI H+L+TKQT
Sbjct: 79 KELGVPEVVLKAQILAGGRGKGRFSSGLVGGVKVTRDLESIEGLARDMINHRLVTKQTNS 138
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G+ V KVMVA++++I RETY I+ D GPV++ SP GG DIE +A K P + IP
Sbjct: 139 NGVEVKKVMVAEALDIARETYLAILMDPATQGPVLVGSPDGGVDIEEIAEKNPERIFKIP 198
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D+ +GIT Q L AK LEF+ L+
Sbjct: 199 VDIMKGITMD-----------QALLMAKN----------------------LEFKDGLRD 225
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
AAT++ KL++LF VDATQ+EINP ET + V+ DAK+NFDD A++RQK IFS+ +
Sbjct: 226 TAATQIMKLYDLFCGVDATQVEINPFGETPDGRVVCFDAKVNFDDTAKYRQKEIFSREDT 285
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
SE D REV+A+ +NLNY+GM+GNIGCLVNGAGLAMATMDIIKLH GEPANFLDVGG VNE
Sbjct: 286 SEKDEREVEATLHNLNYIGMNGNIGCLVNGAGLAMATMDIIKLHKGEPANFLDVGGAVNE 345
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
++ AF+++++D V+ ILVNVFGGIV+CATIA G++ ACK +L IPL+VRLEG+NV
Sbjct: 346 SQVLSAFKLLTADPQVRAILVNVFGGIVSCATIASGIIAACKEMELHIPLIVRLEGSNVD 405
Query: 401 EGKRILDESKLPLIFASDLDEAAS 424
+ + +L++S LP+I A DL +AA+
Sbjct: 406 KARSLLEDSDLPIIPAKDLSDAAA 429
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ ++ ACK +L IPL+VRLEG+NV + + +L++S LP+I A DL +AA
Sbjct: 379 ASGIIAACKEMELHIPLIVRLEGSNVDKARSLLEDSDLPIIPAKDLSDAA 428
>gi|9955022|pdb|1EUD|B Chain B, Crystal Structure Of Phosphorylated Pig Heart,
Gtp-Specific Succinyl-Coa Synthetase
Length = 396
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/391 (51%), Positives = 267/391 (68%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 29 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYN 88
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 89 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 148
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 149 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 175
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G L+ +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 176 GFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 235
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 236 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 295
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVN A IA G+ A + +L +PLVV
Sbjct: 296 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNXAIIANGITKAXRELELKVPLVV 355
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL S LP+ A DL++AA
Sbjct: 356 RLEGTNVHEAQNILTNSGLPITSAVDLEDAA 386
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + A + +L +PLVVRLEGTNV E + IL S LP+ A DL++AA
Sbjct: 337 ANGITKAXRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAA 386
>gi|449474205|ref|XP_002188599.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Taeniopygia guttata]
Length = 557
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/391 (50%), Positives = 266/391 (68%), Gaps = 33/391 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A + L KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG
Sbjct: 188 DSANDALEAAQRLKAKEIVLKAQILAGGRGKGIFNSGLKGGVHLTKDPKTVEQLAKQMIG 247
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQT K G+ V KVMVA++++I+RETYF I+ DR NGPV++ SP GG DIE VA
Sbjct: 248 YNLSTKQTSKDGVTVKKVMVAEALDISRETYFAILMDRACNGPVMVGSPQGGVDIEEVAV 307
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P L+ ID+ +GI + A +A L FQG L+ +AA +++KL+N
Sbjct: 308 TSPELIFKEEIDIFEGIKDHQALQMAKNLGFQGPLQQQAADQIKKLYN------------ 355
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 356 ---------------------LFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 394
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 395 QKEIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPAN 454
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 455 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPL 514
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
VVRLEGTNV E +RIL ES LP+ A+DL++
Sbjct: 515 VVRLEGTNVHEAQRILSESGLPITSANDLED 545
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E +RIL ES LP+ A+DL++
Sbjct: 498 ANGITKACQELELKVPLVVRLEGTNVHEAQRILSESGLPITSANDLED 545
>gi|442738951|gb|AGC69735.1| GDP-forming succinate-CoA ligase [Dictyostelium lacteum]
Length = 423
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/405 (50%), Positives = 266/405 (65%), Gaps = 36/405 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKM 88
+ ++ A +K+LN KE V+KAQ+ AGGRG G F + GFK GVH ++ + ++M
Sbjct: 54 ISQSQEAIKAVKELNAKELVVKAQVHAGGRGKGTFIETGFKGGVHLCKTGEEAERLSKEM 113
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+ L+TKQT K G VN VM+A+SV+ RE YF IV DR + GPV+I SP GG DIE V
Sbjct: 114 LNKHLVTKQTTKEGTKVNHVMIAESVDPKRELYFAIVMDRKYGGPVMIASPKGGVDIEQV 173
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A +TP L+ PID+ +GI + +A+ L F G K K A +
Sbjct: 174 AEETPDLIFKEPIDIFKGIKPEQTKRLAEKLGFTG-AKVKEAQD---------------- 216
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
++ L++LF+ DATQ+EINP ET + ++ ++DAKINFDDNA
Sbjct: 217 ----------------QMASLYDLFVKSDATQVEINPFAETTDNKIYAMDAKINFDDNAY 260
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQK IF+ + E DPREV+ASK+ LNY+G+DGNIGC+VNGAGLAMATMDIIKL GG P
Sbjct: 261 FRQKEIFAMRDFGEEDPREVEASKFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLKGGIP 320
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG NE ++ +AF+I++ D VKCILVN+FGGI+ C IA G+V ACK L I
Sbjct: 321 ANFLDVGGGANETAVTEAFKILTKDPRVKCILVNIFGGIMKCDIIASGIVAACKQVGLKI 380
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFK 433
PLVVRLEGTNVQ GK+IL +S L ++ A+DLD+AA + KS K
Sbjct: 381 PLVVRLEGTNVQLGKKILQDSGLNIVTANDLDDAAE--KSVKSLK 423
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +V ACK L IPLVVRLEGTNVQ GK+IL +S L ++ A+DLD+AA
Sbjct: 366 ASGIVAACKQVGLKIPLVVRLEGTNVQLGKKILQDSGLNIVTANDLDDAA 415
>gi|397492024|ref|XP_003816933.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Pan paniscus]
Length = 444
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/391 (50%), Positives = 270/391 (69%), Gaps = 33/391 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A K LN KE V+KAQILAGGRG G F++G + GV+ T + + + ++MIG
Sbjct: 75 DSANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLRGGVNLTKDPNVVGQLAKQMIG 134
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ VNKVMVA++++I+RETY I+ D+ NGPV++ SP G DIE VAA
Sbjct: 135 YNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPVLVGSPQEGIDIEEVAA 194
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P L+ ID+ +GI +S AQ ++A+
Sbjct: 195 SNPELIFKEQIDIFEGIKDSQAQ---------------------------------RMAE 221
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEF+
Sbjct: 222 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQ 281
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 282 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPAN 341
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 342 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPL 401
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
V+ LEGTNVQE ++IL+ S+LP+ A DL++
Sbjct: 402 VIWLEGTNVQEAQKILNNSRLPITSAVDLED 432
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLV+ LEGTNVQE ++IL+ S+LP+ A DL++
Sbjct: 385 ANGITKACQELELKVPLVIWLEGTNVQEAQKILNNSRLPITSAVDLED 432
>gi|444705667|gb|ELW47067.1| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Tupaia chinensis]
Length = 399
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/376 (51%), Positives = 262/376 (69%), Gaps = 33/376 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+ L TKQTPK G+ V
Sbjct: 45 KEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKV 104
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
KVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA P L+ ID+ +
Sbjct: 105 KKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFE 164
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+ +S AQ ++A+ L F G LK +AA +
Sbjct: 165 GLKDSQAQ---------------------------------RMAENLGFLGPLKNQAADQ 191
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK+IF+ ++ SE++P
Sbjct: 192 IKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEP 251
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFLD+GGGV E +
Sbjct: 252 IENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKESQVYH 311
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVVRLEGTNVQE + I
Sbjct: 312 AFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVQEAQNI 371
Query: 406 LDESKLPLIFASDLDE 421
L S LP+ A DL++
Sbjct: 372 LSNSGLPITSAVDLED 387
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 340 ANGITKACRELELKVPLVVRLEGTNVQEAQNILSNSGLPITSAVDLED 387
>gi|313214519|emb|CBY40868.1| unnamed protein product [Oikopleura dioica]
gi|313226411|emb|CBY21555.1| unnamed protein product [Oikopleura dioica]
Length = 374
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 256/377 (67%), Gaps = 33/377 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
E VIKAQILAGGRG G FD GFK GVHF + +++MIG++L TKQT G+ V
Sbjct: 22 ELVIKAQILAGGRGKGTFDTGFKGGVHFATDPAKCGEYVKQMIGNRLTTKQTLPEGVPVQ 81
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
KVMVA +++I+RETY ++ DR NGPV++ SP GG DIE VA KTP + T+PID++ G
Sbjct: 82 KVMVAHALDISRETYLAVLMDREFNGPVIVGSPDGGMDIEEVAEKTPERIFTMPIDINDG 141
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
I+ A ++A L+F G+ KA T AA ++
Sbjct: 142 ISMEQALEMAKNLQFTGE---KANT------------------------------AAEQI 168
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
KL+N+F++VDATQ+EINP ET + EV+ DAKINFDDNA +RQ++IF+ + +E+DPR
Sbjct: 169 MKLYNMFIAVDATQVEINPFGETPQGEVVCFDAKINFDDNAAYRQQDIFAMGDDTETDPR 228
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV+A K+ LNYVGMDG+IGCLVNGAGLAMATMDIIKL GGEPANFLD+GGGV E + +A
Sbjct: 229 EVEAEKFGLNYVGMDGDIGCLVNGAGLAMATMDIIKLEGGEPANFLDLGGGVQESGVFEA 288
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
RII+SD+ VK +LVN+FGGIVNC IA+G+ A + ++ PLV RLEGTNV K IL
Sbjct: 289 LRIITSDAAVKVVLVNIFGGIVNCEIIARGVNRAYEELGITTPLVCRLEGTNVDSAKEIL 348
Query: 407 DESKLPLIFASDLDEAA 423
+ P+I + EAA
Sbjct: 349 AKGGHPVITSDSFGEAA 365
>gi|357631410|gb|EHJ78928.1| succinyl-coa synthetase beta chain [Danaus plexippus]
Length = 313
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/336 (57%), Positives = 239/336 (71%), Gaps = 33/336 (9%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGHKLITKQTPK GI V+KVM+A+SVNI RETY IV +R +NG ++ SP+GG DIE
Sbjct: 1 MIGHKLITKQTPKDGILVDKVMIAESVNIKRETYLSIVLERAYNGAALVASPAGGMDIEA 60
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA KTPHL+KT+PID+++GIT+ A+++A+FLEF+G L K A E++KLW
Sbjct: 61 VAEKTPHLIKTVPIDIYEGITDKTAREVAEFLEFKGPLLNKCADEIKKLW---------- 110
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
LFL VDATQLEINPLVETD+ +V++VDAKINFDDNA
Sbjct: 111 -----------------------QLFLKVDATQLEINPLVETDDGKVVAVDAKINFDDNA 147
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK IF+ ++ SE+DPRE +A +NL Y+ MDG+IGC+VNGAGLAMATMD+I L GG
Sbjct: 148 EFRQKEIFALDDKSETDPREREAEAHNLTYIDMDGSIGCMVNGAGLAMATMDLIVLSGGR 207
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLD+GGGV + + A +I+ SD VK I VNVF GIVNCA +AKG+V CK
Sbjct: 208 PANFLDLGGGVGQAQVSTALKILESDPKVKAIFVNVFAGIVNCAMVAKGIVAVCKENLPK 267
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V+RLEGTN K+IL+ES LPL +D DEAA
Sbjct: 268 HPIVIRLEGTNASIAKKILEESGLPLHIVNDADEAA 303
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V CK P+V+RLEGTN K+IL+ES LPL +D DEAA
Sbjct: 254 AKGIVAVCKENLPKHPIVIRLEGTNASIAKKILEESGLPLHIVNDADEAA 303
>gi|281350903|gb|EFB26487.1| hypothetical protein PANDA_020149 [Ailuropoda melanoleuca]
Length = 367
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/364 (52%), Positives = 254/364 (69%), Gaps = 33/364 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE+V+KAQILAGGRG G F +G K GVH T + Q + + ++MIG+
Sbjct: 37 AKEALEAAKKLNAKEFVLKAQILAGGRGKGVFSSGLKGGVHLTKDPQVVGQLAKQMIGYN 96
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR +NGPV++ SP GG DIE VAA
Sbjct: 97 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSYNGPVLVGSPQGGVDIEEVAASN 156
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 157 PELIFKEQIDIMEGIKDSQAQ---------------------------------RMAENL 183
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 184 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 243
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 244 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 303
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 304 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 363
Query: 393 RLEG 396
RLEG
Sbjct: 364 RLEG 367
>gi|330831784|ref|XP_003291936.1| succinate-CoA ligase (GDP-forming) [Dictyostelium purpureum]
gi|325077850|gb|EGC31536.1| succinate-CoA ligase (GDP-forming) [Dictyostelium purpureum]
Length = 424
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/395 (49%), Positives = 262/395 (66%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKM 88
++ A AT +LN KE V+KAQ+ AGGRG GHF + GFK GVH ++ + ++M
Sbjct: 54 VKQANEATKAADELNAKELVVKAQVHAGGRGKGHFIETGFKGGVHLCKTGKEAERLCKEM 113
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+G L+TKQT G V VM+A+SV+ RE Y IV DR + GPV+I SP GG DIE+V
Sbjct: 114 LGKHLVTKQTTAEGTKVQSVMLAESVDPARELYLAIVMDRKYGGPVMIASPKGGVDIESV 173
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A +TP L+ PID+ GI S ++++
Sbjct: 174 AEETPELIFKEPIDIIGGIK---------------------------------SEQSKRL 200
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
A+ L F G+ A A +++ L+ LF+ DATQ+E+NP ET + ++ ++DAKINFDDNA
Sbjct: 201 AEKLGFTGEKVAIAQKQMENLYQLFIKCDATQVEVNPFAETTDGKIYAMDAKINFDDNAS 260
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQK IF+ + +E D REV+ASK+ LNY+G+DG IGC+VNGAGLAMATMDIIKL GG P
Sbjct: 261 FRQKEIFAMRDFAEEDQREVEASKFGLNYIGLDGTIGCMVNGAGLAMATMDIIKLKGGTP 320
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGG +EE++ +AF+I++ D VK ILVN+FGGI+ C IA G+VNA K L+I
Sbjct: 321 ANFLDVGGSASEEAVTEAFKIVTKDPRVKSILVNIFGGIMKCDIIASGIVNASKQIGLTI 380
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNVQ GK+IL++S L +I A+DLD+AA
Sbjct: 381 PLVVRLEGTNVQLGKQILEKSGLNIITANDLDDAA 415
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 41/50 (82%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +VNA K L+IPLVVRLEGTNVQ GK+IL++S L +I A+DLD+AA
Sbjct: 366 ASGIVNASKQIGLTIPLVVRLEGTNVQLGKQILEKSGLNIITANDLDDAA 415
>gi|332261161|ref|XP_003279644.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial isoform 2 [Nomascus leucogenys]
Length = 444
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/372 (51%), Positives = 257/372 (69%), Gaps = 33/372 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG
Sbjct: 63 DTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIG 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 123 YNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P L+ ID+ +GI +S AQ ++A+
Sbjct: 183 SNPELIFKEQIDIFEGIKDSQAQ---------------------------------RMAE 209
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 210 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 270 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 330 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 389
Query: 391 VVRLEGTNVQEG 402
VVRLEGT +++G
Sbjct: 390 VVRLEGTFMEKG 401
>gi|281209693|gb|EFA83861.1| succinate-CoA ligase [Polysphondylium pallidum PN500]
Length = 424
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/395 (50%), Positives = 256/395 (64%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKM 88
+ +A A K+LN KE VIKAQ+ AGGRG G F + GFK GV Q+ + +M
Sbjct: 54 ISNASEAQKAAKELNAKELVIKAQVHAGGRGKGTFIETGFKGGVQLCTTPQEAERLSAEM 113
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+G L+TKQT K G V KVM+A+SV+ +RE YF I+ DR GPV++ SP GG DIE V
Sbjct: 114 LGKHLVTKQTTKDGTLVQKVMIAESVDPSRELYFAILMDRASGGPVLVASPKGGVDIEAV 173
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A +TP L+ PID+ +G+ Q L ++
Sbjct: 174 AEETPELIFKEPIDIMKGVQPE-----------------------QTL----------RL 200
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
A L F GD A A +++ L+ LF+ DATQ+E+NP ET E+ ++DAKINFDDNA
Sbjct: 201 AKKLGFTGDKVAVAQKQMENLYELFIKSDATQVEVNPFAETTNGEIYAMDAKINFDDNAS 260
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQK IF +V+E DPREV ASK+ LNY+GMDGNIGCLVNGAGLAMATMDIIKLH G P
Sbjct: 261 FRQKQIFDMRDVAEEDPREVAASKFGLNYIGMDGNIGCLVNGAGLAMATMDIIKLHKGTP 320
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG + + +AF+II++D VK ILVN+FGGI+ C IA+G+V+AC+ L I
Sbjct: 321 ANFLDVGGGATADQVREAFKIITTDPQVKAILVNIFGGIMKCDIIAQGVVSACQQIGLKI 380
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRL GTNV+ G++IL +S +I A DLD+AA
Sbjct: 381 PLVVRLAGTNVEIGQKILKDSGFNIITAVDLDDAA 415
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V+AC+ L IPLVVRL GTNV+ G++IL +S +I A DLD+AA
Sbjct: 366 AQGVVSACQQIGLKIPLVVRLAGTNVEIGQKILKDSGFNIITAVDLDDAA 415
>gi|301788870|ref|XP_002929852.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like, partial [Ailuropoda melanoleuca]
Length = 429
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 253/363 (69%), Gaps = 33/363 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE+V+KAQILAGGRG G F +G K GVH T + Q + + ++MIG+
Sbjct: 100 AKEALEAAKKLNAKEFVLKAQILAGGRGKGVFSSGLKGGVHLTKDPQVVGQLAKQMIGYN 159
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR +NGPV++ SP GG DIE VAA
Sbjct: 160 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSYNGPVLVGSPQGGVDIEEVAASN 219
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 220 PELIFKEQIDIMEGIKDSQAQ---------------------------------RMAENL 246
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 247 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 306
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 307 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 366
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 367 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 426
Query: 393 RLE 395
RLE
Sbjct: 427 RLE 429
>gi|119617914|gb|EAW97508.1| hCG1791842, isoform CRA_a [Homo sapiens]
Length = 427
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/389 (50%), Positives = 265/389 (68%), Gaps = 34/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 61 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKRGVHLTKDPNVVGQLAKQMIGYN 120
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ D+ NGP+++ SP G DIE VAA
Sbjct: 121 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDQSCNGPMLVGSPQEGIDIEEVAASN 180
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 181 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 207
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEF+QK
Sbjct: 208 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFQQK 267
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+G +PA+FL
Sbjct: 268 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGRKPASFL 327
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF + ++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 328 DLGGGVKEAQVYQAFTLPTADPKVEAILVNIFGGIVNCAIIANGITKACQELELKVPLVV 387
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
LEGTNVQE + IL+ S+LP+ A DL++
Sbjct: 388 WLEGTNVQEAQEILN-SRLPITSAVDLED 415
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVV LEGTNVQE + IL+ S+LP+ A DL++
Sbjct: 369 ANGITKACQELELKVPLVVWLEGTNVQEAQEILN-SRLPITSAVDLED 415
>gi|294862256|ref|NP_001171070.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
isoform 1 precursor [Homo sapiens]
Length = 440
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/367 (52%), Positives = 253/367 (68%), Gaps = 33/367 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG
Sbjct: 63 DTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIG 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 123 YNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P L+ ID+ +GI +S AQ ++A+
Sbjct: 183 SNPELIFKEQIDIFEGIKDSQAQ---------------------------------RMAE 209
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 210 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 270 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 330 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 389
Query: 391 VVRLEGT 397
VVRLEGT
Sbjct: 390 VVRLEGT 396
>gi|332817256|ref|XP_003309926.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Pan troglodytes]
Length = 440
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/367 (52%), Positives = 253/367 (68%), Gaps = 33/367 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG
Sbjct: 63 DTANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIG 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 123 YNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P L+ ID+ +GI +S AQ ++A+
Sbjct: 183 SNPELIFKEQIDIFEGIKDSQAQ---------------------------------RMAE 209
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 210 NLGFIGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 270 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 330 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPL 389
Query: 391 VVRLEGT 397
VVRLEGT
Sbjct: 390 VVRLEGT 396
>gi|344241636|gb|EGV97739.1| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Cricetulus griseus]
Length = 358
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/351 (53%), Positives = 248/351 (70%), Gaps = 33/351 (9%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+KAQILAGGRG G FD+G K GVH T + + + + ++MIG+ L TKQTPK G+ V
Sbjct: 16 KEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPKVVGQLAQQMIGYNLATKQTPKEGVKV 75
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
NKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA P L+ ID+ +
Sbjct: 76 NKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASNPELIFKEQIDIFE 135
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI +S AQ ++A+ L F G LK +AA +
Sbjct: 136 GINDSQAQ---------------------------------RMAENLGFLGPLKNQAADQ 162
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK+IF+ ++ SE++P
Sbjct: 163 IKKLYHLFLKIDATQVEVNPFGETAEGQVVCFDAKINFDDNAEFRQKDIFAMDDKSENEP 222
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFLD+GGGV E + Q
Sbjct: 223 IENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVKEAQVYQ 282
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEG 396
AF++I+SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVVRLEG
Sbjct: 283 AFKLITSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEG 333
>gi|66821399|ref|XP_644183.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
gi|74860306|sp|Q869S7.1|SUCB2_DICDI RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial; AltName: Full=GTP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-G chain; Short=SCS-betaG; Flags:
Precursor
gi|60472164|gb|EAL70117.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
Length = 420
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 253/378 (66%), Gaps = 34/378 (8%)
Query: 47 EYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
E V+KAQ+ AGGRG G F + GFK GVH ++ + ++M+G L+TKQT K G V
Sbjct: 67 ELVVKAQVHAGGRGKGSFIETGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKV 126
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
VM+A+SV+ RE YF IV DR + GPV+I SP GG DIE+VA +TP L+ PID+ +
Sbjct: 127 QSVMLAESVDPKRELYFAIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVK 186
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI +++A+ L F G+ KAK A + +
Sbjct: 187 GIRPEQTKNLAEKLGFTGE-KAKIAQQ--------------------------------Q 213
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++ L+ LF+ DATQ+EINP ET + +VI +DAKINFDDNA FRQK IF + +E DP
Sbjct: 214 MENLYQLFIKSDATQVEINPFAETTDGQVICMDAKINFDDNASFRQKEIFEMRDTAEEDP 273
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV+A K+ LNY+G+DGNIGC+VNGAGLAMATMDIIKL GG PANFLDVGG +E+++ +
Sbjct: 274 REVEAGKFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLKGGIPANFLDVGGSASEQAVTE 333
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++ D VKC+LVN+FGGI+ C IA G+VNA K L IPLVVRLEGTNV GK I
Sbjct: 334 AFKILTKDPRVKCLLVNIFGGIMKCDIIASGIVNASKQVGLKIPLVVRLEGTNVNIGKEI 393
Query: 406 LDESKLPLIFASDLDEAA 423
L++S L + ASDLD+AA
Sbjct: 394 LEKSGLNITSASDLDDAA 411
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +VNA K L IPLVVRLEGTNV GK IL++S L + ASDLD+AA
Sbjct: 362 ASGIVNASKQVGLKIPLVVRLEGTNVNIGKEILEKSGLNITSASDLDDAA 411
>gi|355746585|gb|EHH51199.1| hypothetical protein EGM_10535, partial [Macaca fascicularis]
Length = 411
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/364 (51%), Positives = 249/364 (68%), Gaps = 33/364 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 36 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 95
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 96 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 155
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 156 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 182
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 183 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 242
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 243 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 302
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FG IVNCA IA G+ AC +L +PLVV
Sbjct: 303 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGSIVNCAIIANGITKACWELELKVPLVV 362
Query: 393 RLEG 396
RLEG
Sbjct: 363 RLEG 366
>gi|440804674|gb|ELR25551.1| succinylcoa synthetase beta chain, putative [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/377 (49%), Positives = 254/377 (67%), Gaps = 32/377 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ ++KAQ+LAGGRG+GHFD+G K GVH + +++ + KM+GH + TKQT G N
Sbjct: 92 DVIVKAQVLAGGRGVGHFDSGLKGGVHTCTSPEEVKDVASKMLGHHIFTKQTGPEGKPCN 151
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
V +A+ + I RETYF I+ DR +NGPV+I S GG+DIE ++A+ P + IPID+ +G
Sbjct: 152 VVYLAERLFIRRETYFAILMDRAYNGPVIIGSSKGGSDIETLSAEHPDAIFKIPIDIAEG 211
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+T + +AD L FQ +T+V K + V
Sbjct: 212 VTPEKLELVADKLGFQ-------STKV-------------------------KEQTKELV 239
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
KL++LF+ D T EINPLVE + +++++DAK+ FDDNAEFRQK IF+ + S+ DPR
Sbjct: 240 SKLYDLFIKKDCTLAEINPLVEDHQGQIVALDAKLRFDDNAEFRQKEIFALRDESQEDPR 299
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV ASK++LNY+ ++GNIGCLVNGAGLAMATMDIIKL GG PANFLDVGGG E+ + +A
Sbjct: 300 EVAASKFDLNYIQLNGNIGCLVNGAGLAMATMDIIKLKGGNPANFLDVGGGATEKQVTEA 359
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
FRI SSD +VK ++VN+FGGI+ C IA G++NA K + +PLVVRL GTN++E K +L
Sbjct: 360 FRIFSSDKSVKAVMVNIFGGIMRCDIIAMGILNAVKVLNIKVPLVVRLLGTNMKEAKDLL 419
Query: 407 DESKLPLIFASDLDEAA 423
+ S +IFASDLDEAA
Sbjct: 420 ENSGARIIFASDLDEAA 436
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA K + +PLVVRL GTN++E K +L+ S +IFASDLDEAA
Sbjct: 387 AMGILNAVKVLNIKVPLVVRLLGTNMKEAKDLLENSGARIIFASDLDEAA 436
>gi|83284007|gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
Length = 421
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/380 (50%), Positives = 251/380 (66%), Gaps = 34/380 (8%)
Query: 44 NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
N E V+K+Q+LAGGRGLG F NGF+ GVH Q I KM+G L+TKQT G
Sbjct: 68 NQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQ-AEEIASKMLGQILVTKQTGAQGK 126
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
V+KV + + +++ E YF I+ DR GP++I GGT IE++A K P ++ +PIDV
Sbjct: 127 VVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDV 186
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
+GI++ A + D LA K+AD R D +
Sbjct: 187 FKGISDEDAAKVVD-------------------------GLAPKVAD----RND----SI 213
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
+V+KL+NLF D T LEINPL ET + ++++ DAK+NFDDNA +RQK IFS + S+
Sbjct: 214 EQVKKLYNLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAYRQKEIFSLRDSSQE 273
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG E +
Sbjct: 274 DPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNATEGQV 333
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
++AF+I+++D VK ILVN+FGGI+ C IA G+VNA K +L +P++VRLEGTNV++GK
Sbjct: 334 VEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVRLEGTNVEQGK 393
Query: 404 RILDESKLPLIFASDLDEAA 423
RIL ES + LI A DLD+AA
Sbjct: 394 RILKESGMKLITAEDLDDAA 413
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K +L +P++VRLEGTNV++GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVQLKVPVIVRLEGTNVEQGKRILKESGMKLITAEDLDDAAEKAVKA 419
>gi|356537120|ref|XP_003537078.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Glycine max]
Length = 422
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/400 (48%), Positives = 259/400 (64%), Gaps = 40/400 (10%)
Query: 28 VCLEDARTATNILKDL--NFKEYVIKAQILAGGRGLGHFDNGFKSGVHF--TNNVQDIPP 83
V + A ++KDL N E V+K+QILAGGRGLG F +G K GVH T+ V+DI
Sbjct: 50 VAVSSVEEARKVIKDLFPNENELVVKSQILAGGRGLGTFKSGLKGGVHIVKTDQVEDIAG 109
Query: 84 ILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGT 143
KM+G L+TKQT G V+KV + + +++ E YF I DR GP++I GGT
Sbjct: 110 ---KMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAITLDRTSAGPIIIACSKGGT 166
Query: 144 DIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSS 203
IE++A K P ++ +P+DV +GIT+ A + D
Sbjct: 167 SIEDLAEKFPDMIIKVPVDVFEGITDEGAAKVVD-------------------------G 201
Query: 204 LAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINF 263
LA K+AD + K+ +V+ L+ LF+ D T LEINP+ ET + ++++ DAK+NF
Sbjct: 202 LALKVAD--------RNKSIEQVKNLYKLFVDCDCTLLEINPIAETADNQLVAADAKLNF 253
Query: 264 DDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKL 323
DDNA +RQK IFS + ++ DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKL
Sbjct: 254 DDNAAYRQKEIFSLRDTTQEDPREVTAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKL 313
Query: 324 HGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKS 383
HGG PANFLDVGG +E +++AF+I+++D VK ILVN+FGGI+ C IA G+VNA K
Sbjct: 314 HGGTPANFLDVGGNASENQVVEAFKILTADDKVKAILVNIFGGIMKCDVIASGIVNAAKE 373
Query: 384 FKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA
Sbjct: 374 VALKVPVVVRLEGTNVDQGKRILKESGMALITAEDLDDAA 413
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKEVALKVPVVVRLEGTNVDQGKRILKESGMALITAEDLDDAAQKAVKA 419
>gi|328875554|gb|EGG23918.1| succinate-CoA ligase [Dictyostelium fasciculatum]
Length = 418
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/395 (47%), Positives = 252/395 (63%), Gaps = 34/395 (8%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKM 88
+ A A +LN KE VIKAQ+ AGGRG G F + G+K GV ++ + M
Sbjct: 48 ISKADEAPKAASELNAKELVIKAQVHAGGRGKGTFKETGYKGGVKLCTTGKEAQELSGHM 107
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+G L+TKQT G V KVM+A+SV+ RE YF I+ DR GPV++ SP GG DIE V
Sbjct: 108 LGKHLVTKQTTADGTLVQKVMIAESVDPARELYFAILMDRASGGPVMVASPKGGVDIEAV 167
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A +TP L+ +D+ +G+ +++
Sbjct: 168 AEETPELIYKEVVDITKGVQ---------------------------------PEQTRRL 194
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
A+ L F+GD A +++ L+ LF+ DATQ+E+NP ET + ++ ++DAKINFDDNA
Sbjct: 195 AEKLGFKGDKLKIAQEQMENLYKLFIKSDATQVEVNPFAETTDGKIYAMDAKINFDDNAS 254
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQK+IF +++E DPREV+AS++ LNY+GMDGNIGC+VNGAGLAMATMDIIKLH G P
Sbjct: 255 FRQKDIFDMRDIAEEDPREVEASQHGLNYIGMDGNIGCMVNGAGLAMATMDIIKLHKGTP 314
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG E+ + +AF+I++ D VK ILVN+FGGI+ C IA G+V ACK L I
Sbjct: 315 ANFLDVGGGATEKQVTEAFKILTKDKQVKAILVNIFGGIMKCDVIAAGVVGACKQVGLKI 374
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRL GTNV+ GK IL++S +I A+DLD+AA
Sbjct: 375 PLVVRLAGTNVEIGKDILEKSGFNIITANDLDDAA 409
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA +V ACK L IPLVVRL GTNV+ GK IL++S +I A+DLD+AA
Sbjct: 360 AAGVVGACKQVGLKIPLVVRLAGTNVEIGKDILEKSGFNIITANDLDDAA 409
>gi|350537431|ref|NP_001234293.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Solanum lycopersicum]
gi|75147005|sp|Q84LB6.1|SUCB_SOLLC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; Short=SlSCoALbeta; Flags: Precursor
gi|27803873|gb|AAO22150.1| succinyl CoA ligase beta subunit [Solanum lycopersicum]
Length = 417
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/380 (49%), Positives = 251/380 (66%), Gaps = 34/380 (8%)
Query: 44 NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
N E V+K+Q+LAGGRGLG F NGF+ GVH Q I KM+G L+TKQT G
Sbjct: 64 NQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQ-AEDIASKMLGQILVTKQTGAQGK 122
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
V+KV + + +++ E YF I+ DR GP++I GGT IE++A K P ++ +PIDV
Sbjct: 123 VVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDV 182
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
+GI+++ A + D LA K+AD R D +
Sbjct: 183 FKGISDADAAKVVD-------------------------GLAPKVAD----RND----SI 209
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
+V+KL+ LF D T LEINPL ET + ++++ DAK+NFDDNA +RQK IFS + S+
Sbjct: 210 EQVKKLYKLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAYRQKEIFSLRDSSQE 269
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG E +
Sbjct: 270 DPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNATEGQV 329
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
++AF+I+++D VK ILVN+FGGI+ C IA G+VNA K +L +P++VRLEGTNV++GK
Sbjct: 330 VEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVRLEGTNVEQGK 389
Query: 404 RILDESKLPLIFASDLDEAA 423
RIL ES + LI A DLD+AA
Sbjct: 390 RILKESGMKLITAEDLDDAA 409
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K +L +P++VRLEGTNV++GKRIL ES + LI A DLD+AA + A
Sbjct: 360 ASGIVNAAKQVQLKVPVIVRLEGTNVEQGKRILKESGMKLITAEDLDDAAEKAVKA 415
>gi|355559518|gb|EHH16246.1| hypothetical protein EGK_11505 [Macaca mulatta]
Length = 440
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/366 (51%), Positives = 248/366 (67%), Gaps = 33/366 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A K LN KE V+KAQILAGGRG F++G K GVH T + + + ++MIG
Sbjct: 63 DTANEALEAAKRLNAKEIVLKAQILAGGRGKRVFNSGLKGGVHLTKDPNVVGQLAKQMIG 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 123 YNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P L+ ID+ +GI +S AQ++A+
Sbjct: 183 SNPELIFKEQIDIFEGIK---------------------------------ASQAQRMAE 209
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 210 NLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGL MAT DII L+GG+PAN
Sbjct: 270 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLTMATCDIIFLNGGKPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FG IVNCA IA G+ AC +L +PL
Sbjct: 330 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGSIVNCAIIANGITKACWELELKVPL 389
Query: 391 VVRLEG 396
VVRLEG
Sbjct: 390 VVRLEG 395
>gi|224065571|ref|XP_002301863.1| predicted protein [Populus trichocarpa]
gi|222843589|gb|EEE81136.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/379 (50%), Positives = 253/379 (66%), Gaps = 38/379 (10%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHF--TNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
E V+K+Q+LAGGRGLG F NGF+ GVH T+ V++ KM+G L+TKQT G
Sbjct: 70 ELVVKSQVLAGGRGLGKFKNGFQGGVHIVKTDKVEETAG---KMLGQILVTKQTGSQGKI 126
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V+KV + + +++ E YF I+ DR GP++I GGT IE++A K P L+ +PIDV
Sbjct: 127 VSKVYLCEKLSLVNEMYFAIMLDRTTAGPLIIACKKGGTSIEDLAEKFPDLIIKVPIDVF 186
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+GIT+ A + D LA K+AD R D +
Sbjct: 187 KGITDEDAVKVVD-------------------------GLAPKVAD----RND----SIE 213
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+V+KL+ LF D T LEINP+ ET ++++++ DAK+NFDDNA FRQK IF+ + ++ D
Sbjct: 214 QVKKLYKLFCESDCTLLEINPIAETSDKQLVAADAKLNFDDNAAFRQKEIFALRDPTQED 273
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +EE ++
Sbjct: 274 PREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEEQVV 333
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
+AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKR
Sbjct: 334 EAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQGKR 393
Query: 405 ILDESKLPLIFASDLDEAA 423
IL ES + LI A DLD+AA
Sbjct: 394 ILKESGMALITAEDLDDAA 412
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 363 ASGIVNAAKQVALKVPVVVRLEGTNVDQGKRILKESGMALITAEDLDDAAEKAVKA 418
>gi|255070267|ref|XP_002507215.1| succinate-coa ligase [Micromonas sp. RCC299]
gi|226522490|gb|ACO68473.1| succinate-coa ligase [Micromonas sp. RCC299]
Length = 423
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 182/377 (48%), Positives = 250/377 (66%), Gaps = 35/377 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ V+K+QILAGGRGLGHF NG + GVH + + + EKM+G L+TKQT G VN
Sbjct: 74 DVVLKSQILAGGRGLGHFKNGLQGGVHIVPSGK-AQAVGEKMLGQLLVTKQTGAAGKPVN 132
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
V+VA+ + + E YF I+ DR GP+VI GGT IE++A P + + ID+ G
Sbjct: 133 TVLVAQKMKLVNEMYFAILLDRASAGPLVIACSEGGTSIEDLAETHPEKITRMKIDIRTG 192
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+TE+ A+DI L +G + + A +V
Sbjct: 193 LTEAQARDIVAHLGVKGSV----------------------------------SDAVAQV 218
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+ L+N+F+S D T LEINPL ET E ++I+ DAK+NFDDNAE+RQK +F+ + S+ DPR
Sbjct: 219 KALYNVFISSDCTMLEINPLAETAEAKLIAADAKLNFDDNAEYRQKGLFALRDHSQEDPR 278
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A K++LNY+G+DGNIGC+VNGAGLAMATMDII LHG PANFLDVGG +E+ +++A
Sbjct: 279 EVTAGKFDLNYIGLDGNIGCMVNGAGLAMATMDIISLHGAAPANFLDVGGNASEQQVVEA 338
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F+I++SD+ V+ +LVN+FGGI+ C IA G+V+A K L +PLVVRLEGTNV+ GK IL
Sbjct: 339 FKILTSDTKVQALLVNIFGGIMKCDVIASGIVSAAKQVGLQVPLVVRLEGTNVEAGKEIL 398
Query: 407 DESKLPLIFASDLDEAA 423
++S + +I A+DLD+AA
Sbjct: 399 EKSGMDIIAANDLDDAA 415
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +V+A K L +PLVVRLEGTNV+ GK IL++S + +I A+DLD+AA + A
Sbjct: 366 ASGIVSAAKQVGLQVPLVVRLEGTNVEAGKEILEKSGMDIIAANDLDDAAKKAVSA 421
>gi|449445622|ref|XP_004140571.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Cucumis sativus]
gi|449487361|ref|XP_004157588.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Cucumis sativus]
Length = 421
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 188/378 (49%), Positives = 247/378 (65%), Gaps = 34/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+K+QILAGGRGLG F +G K GVH V + I KM+G L+TKQT G V
Sbjct: 70 KELVVKSQILAGGRGLGTFKSGLKGGVHIVK-VDQVEEIAGKMLGQILVTKQTGPQGKVV 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+KV + + +++T E YF I DR GP++I GGT IE++A P ++ +PIDV Q
Sbjct: 129 SKVYLCEKLSLTNEMYFAITLDRKTAGPLIIACRKGGTSIEDLAENFPDMIIKVPIDVFQ 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT+ A + D LA K AD + + +
Sbjct: 189 GITDEDAAKVVD-------------------------GLAPKGAD--------RQDSIEQ 215
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
V+KL+ LF D T LE+NP+ ET + ++++ DAK+NFDDNA FRQK IF+ + ++ DP
Sbjct: 216 VKKLYKLFCECDCTLLEVNPMAETSDNQLVAADAKLNFDDNAAFRQKAIFALRDPTQEDP 275
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REVDA+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++
Sbjct: 276 REVDAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVE 335
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P++VRLEGTNV +GKRI
Sbjct: 336 AFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVIVRLEGTNVDQGKRI 395
Query: 406 LDESKLPLIFASDLDEAA 423
L ES + LI A DLD+AA
Sbjct: 396 LKESGMTLITAEDLDDAA 413
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P++VRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVALKVPVIVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419
>gi|323450948|gb|EGB06827.1| hypothetical protein AURANDRAFT_28673 [Aureococcus anophagefferens]
Length = 409
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 188/379 (49%), Positives = 246/379 (64%), Gaps = 35/379 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+L E VIK+QILAGGRGLG F NGF+ GVH ++ + EKMIG L+TKQ+
Sbjct: 55 KELGGDEVVIKSQILAGGRGLGTFTNGFQGGVHVIDSAK-TAEYAEKMIGATLVTKQSGA 113
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G VN VMVA+ +N+ E YF I+ DR GPVV+ GGT IE++A +P + +P
Sbjct: 114 EGKPVNVVMVAEKMNLVNEMYFAILLDRAFGGPVVVACAEGGTSIEDLAESSPEKIIKVP 173
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
IDV G+T++ A+ I L GD K
Sbjct: 174 IDVVAGLTDANAEAIVAGLGVSGD----------------------------------KE 199
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
A ++ L+ +F S D T +E+NPL E D+ +I+ DAKI FDDNA FRQK+IF+Q +
Sbjct: 200 AAKKQIASLYEVFKSCDCTMVEVNPLAEDDQGTLIAADAKIGFDDNAAFRQKDIFAQRDE 259
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
S+ DPR+V A K++LNY+G+DG+IGC+VNGAGLAMATMDII++HGG PANFLDVGG +
Sbjct: 260 SQEDPRDVAAEKWDLNYIGLDGSIGCMVNGAGLAMATMDIIQMHGGSPANFLDVGGSATK 319
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E I++AF+II+SDSNVK +LVN+FGGI+ C IA+G+V K L IPLVVRLEGTNV+
Sbjct: 320 EQIVEAFKIITSDSNVKALLVNIFGGIMKCDVIAEGIVAGVKEVGLEIPLVVRLEGTNVE 379
Query: 401 EGKRILDESKLPLIFASDL 419
GK+I+DES L + A DL
Sbjct: 380 LGKKIIDESGLNITSADDL 398
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 515
A +V K L IPLVVRLEGTNV+ GK+I+DES L + A DL
Sbjct: 353 AEGIVAGVKEVGLEIPLVVRLEGTNVELGKKIIDESGLNITSADDL 398
>gi|242062364|ref|XP_002452471.1| hypothetical protein SORBIDRAFT_04g026360 [Sorghum bicolor]
gi|241932302|gb|EES05447.1| hypothetical protein SORBIDRAFT_04g026360 [Sorghum bicolor]
Length = 422
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/378 (49%), Positives = 247/378 (65%), Gaps = 34/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+K+QILAGGRGLG F +G + GVH ++ I KM+G L+TKQT G V
Sbjct: 70 KEIVVKSQILAGGRGLGTFKSGLQGGVHIVK-AEEAESIASKMLGQILVTKQTGPEGKIV 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+KV + + +++T E YF I DR GP++I GGT IE++A K P ++ +PIDV +
Sbjct: 129 SKVYLCEKLSLTNEMYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFK 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT+ A + D LA K AD + + +
Sbjct: 189 GITDEDAAKVVD-------------------------GLALKAAD--------RQSSIEQ 215
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL+ LF D T LEINPL ET + ++++ DAK+NFDDNA FRQK IF+ + ++ DP
Sbjct: 216 IKKLYELFCKCDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKEIFALRDTTQEDP 275
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++
Sbjct: 276 REVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVE 335
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKRI
Sbjct: 336 AFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRI 395
Query: 406 LDESKLPLIFASDLDEAA 423
L ES + LI A DLD+AA
Sbjct: 396 LKESGMTLITAEDLDDAA 413
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419
>gi|356548079|ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Glycine max]
Length = 422
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/398 (48%), Positives = 259/398 (65%), Gaps = 43/398 (10%)
Query: 30 LEDARTATNILKDL--NFKEYVIKAQILAGGRGLGHFDNGFKSGVHF--TNNVQDIPPIL 85
+E+ R A +KDL N E V+K+QILAGGRGLG F +G K GVH T+ V+DI
Sbjct: 55 VEEVRKA---IKDLFPNENELVVKSQILAGGRGLGTFKSGLKGGVHIVKTDQVEDIAG-- 109
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
KM+G L+TKQT G V+KV + + +++ E YF I DR GP++I GGT I
Sbjct: 110 -KMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAITLDRTSAGPIIIACSKGGTSI 168
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E++A K P ++ +P+DV +GIT+ A + D LA
Sbjct: 169 EDLAEKFPDMIIKVPVDVFEGITDEDAAKVVD-------------------------GLA 203
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
K+AD + K+ +V+ L+ LF+ D T LEINP+ ET + ++++ DAK+NFDD
Sbjct: 204 LKVAD--------RNKSIEQVKNLYKLFVDCDCTLLEINPIAETADNQLVAADAKLNFDD 255
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA +RQK IF+ + ++ DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHG
Sbjct: 256 NAAYRQKEIFALRDTTQEDPREVTAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHG 315
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
G PANFLDVGG +E +++AF+I+++D VK ILVN+FGGI+ C IA G+VNA K
Sbjct: 316 GTPANFLDVGGNASEGQVVEAFKILTADDKVKAILVNIFGGIMKCDVIASGIVNAAKEVA 375
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L +P+VVRLEGTNV GKRIL ES + LI A DLD+AA
Sbjct: 376 LKVPVVVRLEGTNVDHGKRILKESGMALITAEDLDDAA 413
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKEVALKVPVVVRLEGTNVDHGKRILKESGMALITAEDLDDAAQKAVKA 419
>gi|297832640|ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
lyrata]
gi|297330042|gb|EFH60461.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/380 (49%), Positives = 245/380 (64%), Gaps = 34/380 (8%)
Query: 44 NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
N E V+K+QILAGGRGLG F +G K GVH Q I KM+G L+TKQT G
Sbjct: 67 NESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRGQ-AEDIAGKMLGQVLVTKQTGPQGK 125
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
V+KV + + +++ E YF I+ DR GP++I GGT IE++A K P ++ +PIDV
Sbjct: 126 VVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDV 185
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
GIT+ A + D LA K AD + +
Sbjct: 186 FAGITDEDAAKVVD-------------------------GLAPKAAD--------RKDSI 212
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
+V+KL+ LF D T LEINPL ET ++++ DAK+NFDDNA FRQK IF+ + ++
Sbjct: 213 EQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEIFAMRDPTQE 272
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +
Sbjct: 273 DPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQV 332
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
++AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV++GK
Sbjct: 333 VEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVSLKVPVVVRLEGTNVEQGK 392
Query: 404 RILDESKLPLIFASDLDEAA 423
RIL ES + LI A DLD+AA
Sbjct: 393 RILKESGMKLITADDLDDAA 412
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV++GKRIL ES + LI A DLD+AA + A
Sbjct: 363 ASGIVNAAKEVSLKVPVVVRLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKA 418
>gi|225438067|ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Vitis vinifera]
gi|147782941|emb|CAN72294.1| hypothetical protein VITISV_037293 [Vitis vinifera]
gi|297744178|emb|CBI37148.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/377 (49%), Positives = 247/377 (65%), Gaps = 34/377 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
E V+K+QILAGGRGLG F +G K GVH Q + + KM+G L+TKQT G V+
Sbjct: 71 ELVVKSQILAGGRGLGTFKSGLKGGVHIVKTDQ-VEELAGKMLGQILVTKQTGPQGKVVS 129
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
KV + + +++ E YF I DR GP++I GGT IE++A K P ++ +PIDV QG
Sbjct: 130 KVYLCEKMSLVNEMYFAITLDRSSAGPIIIACRKGGTSIEDLAEKFPDMIVKVPIDVFQG 189
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
IT+ A + D LA K+AD + + +V
Sbjct: 190 ITDEDAAKVVD-------------------------GLAPKVAD--------RNASIEQV 216
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+KL+ LF D T LEINP+ ET + ++++ DAK+NFDDNA FRQK+IF+ + ++ DPR
Sbjct: 217 KKLYKLFCECDCTLLEINPIAETSDNQLVAADAKLNFDDNAAFRQKHIFALRDATQEDPR 276
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++A
Sbjct: 277 EVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASESQVVEA 336
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F+I+++D VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKRIL
Sbjct: 337 FKILTADDKVKAILVNIFGGIMKCDIIASGIVNAAKEVSLKVPVVVRLEGTNVDQGKRIL 396
Query: 407 DESKLPLIFASDLDEAA 423
ES + LI A DLD+AA
Sbjct: 397 KESGMALITAEDLDDAA 413
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKEVSLKVPVVVRLEGTNVDQGKRILKESGMALITAEDLDDAAEKAVKA 419
>gi|413937840|gb|AFW72391.1| hypothetical protein ZEAMMB73_528334 [Zea mays]
gi|413937841|gb|AFW72392.1| succinyl-CoA ligase beta-chain, mRNA isoform 2 [Zea mays]
Length = 384
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/378 (49%), Positives = 247/378 (65%), Gaps = 34/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+K+QILAGGRGLG F +G + GVH ++ I KM+G LITKQT G V
Sbjct: 32 KEIVVKSQILAGGRGLGTFKSGLQGGVHIVK-AEEAELIASKMLGQILITKQTGPEGKIV 90
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+KV + + +++T E YF I DR GP++I GGT IE++A K P ++ +PIDV +
Sbjct: 91 SKVYLCEKLSLTNEMYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFK 150
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT+ A + D LA K AD + + +
Sbjct: 151 GITDEDAAKVVD-------------------------GLALKAAD--------RQSSIEQ 177
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL+ LF D T LEINPL ET + ++++ DAK+NFDDNA FRQK IF+ + ++ DP
Sbjct: 178 IKKLYELFCKCDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKEIFALRDTTQEDP 237
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++
Sbjct: 238 REVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVE 297
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKRI
Sbjct: 298 AFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRI 357
Query: 406 LDESKLPLIFASDLDEAA 423
L ES + LI A DLD+AA
Sbjct: 358 LKESGMTLITAEDLDDAA 375
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 326 ASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 381
>gi|226500228|ref|NP_001151193.1| succinyl-CoA ligase beta-chain [Zea mays]
gi|194701268|gb|ACF84718.1| unknown [Zea mays]
gi|195644938|gb|ACG41937.1| succinyl-CoA ligase beta-chain [Zea mays]
gi|413937838|gb|AFW72389.1| Succinyl-CoA ligase beta-chain [Zea mays]
Length = 422
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/378 (49%), Positives = 247/378 (65%), Gaps = 34/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+K+QILAGGRGLG F +G + GVH ++ I KM+G LITKQT G V
Sbjct: 70 KEIVVKSQILAGGRGLGTFKSGLQGGVHIVK-AEEAELIASKMLGQILITKQTGPEGKIV 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+KV + + +++T E YF I DR GP++I GGT IE++A K P ++ +PIDV +
Sbjct: 129 SKVYLCEKLSLTNEMYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFK 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT+ A + D LA K AD + + +
Sbjct: 189 GITDEDAAKVVD-------------------------GLALKAAD--------RQSSIEQ 215
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL+ LF D T LEINPL ET + ++++ DAK+NFDDNA FRQK IF+ + ++ DP
Sbjct: 216 IKKLYELFCKCDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKEIFALRDTTQEDP 275
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++
Sbjct: 276 REVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVE 335
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKRI
Sbjct: 336 AFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRI 395
Query: 406 LDESKLPLIFASDLDEAA 423
L ES + LI A DLD+AA
Sbjct: 396 LKESGMTLITAEDLDDAA 413
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419
>gi|402221053|gb|EJU01123.1| succinate-CoA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 416
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/409 (46%), Positives = 255/409 (62%), Gaps = 34/409 (8%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDI 81
V + + + A+ A ++ K+ E VIKAQ+LAGGRG GHF+NGF+ GVH ++ ++
Sbjct: 37 VPTPKSIPAKSAQEAFDVAKNFGTNELVIKAQVLAGGRGKGHFENGFQGGVHMVDSAKEA 96
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
I EKMIGHKLITKQT + G N VM+A+ E Y I+ DR PV++ S SG
Sbjct: 97 EDIAEKMIGHKLITKQTGEKGRICNAVMLAERRTADHEYYVAILNDRASESPVLVASASG 156
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G +IE+VA + P + T PID G+++ +A +A L F+ + K A E+
Sbjct: 157 GMNIEDVAKENPEAIITTPIDFKNGLSDEVALGVAKKLGFKTESTQKQAAEI-------- 208
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
Q L+ +F DATQ+EINPL ET + V+ +DAK
Sbjct: 209 ------------------------FQNLYKIFKDKDATQIEINPLGETKDGAVLCMDAKF 244
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
FDDNAEFRQK+IF+ +V++ DP EV+A KYNLN++ +DGN+GCLVNGAGLAMATMD++
Sbjct: 245 GFDDNAEFRQKDIFALRDVTQEDPAEVEAQKYNLNFIKLDGNVGCLVNGAGLAMATMDVL 304
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KLHGG+PANFLDVGGG E++ AF I+ D NVK I VN+FGGI+ C IA+G++ A
Sbjct: 305 KLHGGDPANFLDVGGGATPETVKAAFEILLGDPNVKSIFVNIFGGIMRCDYIAEGVIKAT 364
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACK 430
+ LS+PLVVRL+GT E K ++ ES L + DLDEAA AC+
Sbjct: 365 QELNLSVPLVVRLQGTKEPEAKALIRESGLKIYPYDDLDEAAE--KACE 411
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + LS+PLVVRL+GT E K ++ ES L + DLDEAA
Sbjct: 357 AEGVIKATQELNLSVPLVVRLQGTKEPEAKALIRESGLKIYPYDDLDEAA 406
>gi|226510248|ref|NP_001150653.1| succinyl-CoA ligase beta-chain [Zea mays]
gi|195640872|gb|ACG39904.1| succinyl-CoA ligase beta-chain [Zea mays]
gi|223975143|gb|ACN31759.1| unknown [Zea mays]
Length = 422
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/378 (49%), Positives = 247/378 (65%), Gaps = 34/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+K+QILAGGRGLG F +G + GVH ++ I KM+G L+TKQT G V
Sbjct: 70 KEIVVKSQILAGGRGLGTFKSGLQGGVHIVK-AEEAESIARKMLGQILVTKQTGPEGKIV 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+KV + + +++T E YF I DR GP++I GGT IE++A K P ++ +P+DV +
Sbjct: 129 SKVYLCEKLSLTNEMYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPVDVFK 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT+ A + D LA K AD + + +
Sbjct: 189 GITDEDAAKVVD-------------------------GLALKSAD--------RQSSIEQ 215
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL+ LF D T LEINPL ET + ++++ DAK+NFDDNA FRQK IF+ + ++ DP
Sbjct: 216 IKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKEIFALRDTTQEDP 275
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++
Sbjct: 276 REVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVE 335
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKRI
Sbjct: 336 AFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRI 395
Query: 406 LDESKLPLIFASDLDEAA 423
L ES + LI A DLD+AA
Sbjct: 396 LKESGMTLITAEDLDDAA 413
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419
>gi|328771096|gb|EGF81136.1| hypothetical protein BATDEDRAFT_34749 [Batrachochytrium
dendrobatidis JAM81]
Length = 457
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/395 (48%), Positives = 250/395 (63%), Gaps = 38/395 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
KDL + VIKAQ+LAGGRG GHF++G K GV + DI + EKM+G+KLITKQT
Sbjct: 83 KDLATNDLVIKAQVLAGGRGKGHFESGLKGGVKVVYSATDIKGLAEKMLGNKLITKQTGA 142
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G N V + + + + RE YF IV DR GPV+I S GG DIE VAA+TP + T P
Sbjct: 143 GGRICNAVYIVERLYVRREFYFAIVMDRATQGPVIIASSQGGMDIETVAAETPEAIVTHP 202
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D++ G+ +AD A +IA + F G
Sbjct: 203 VDINVGL------QLAD---------------------------ATRIAKQIGFDGTGAT 229
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
KAA L+ LF+ D+T +EINPL E +V+ +DAK FDDNA+FRQK+IF+ +
Sbjct: 230 KAAETFMNLYKLFIEKDSTMIEINPLAEIQNGDVMCMDAKFGFDDNADFRQKDIFALRDT 289
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ D REV A+K+NLNY+G+DGNIGCLVNGAGLAMATMDIIKL+GG+PANFLDVGG
Sbjct: 290 TQEDAREVAAAKWNLNYIGLDGNIGCLVNGAGLAMATMDIIKLNGGDPANFLDVGGSARA 349
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
+ + +AF+IISSD +V ILVN+FGGI+ C IA+G++ A K L +PL+VRL+GT V
Sbjct: 350 DQVAEAFKIISSDPHVSAILVNIFGGIMRCDVIAEGIIAAVKQLGLKLPLIVRLQGTQVD 409
Query: 401 EGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
K+++DES L + DLDEAA L S KLS
Sbjct: 410 AAKKLIDESGLRMYSIDDLDEAAVL-----SVKLS 439
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L +PL+VRL+GT V K+++DES L + DLDEAA
Sbjct: 383 AEGIIAAVKQLGLKLPLIVRLQGTQVDAAKKLIDESGLRMYSIDDLDEAA 432
>gi|15225353|ref|NP_179632.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Arabidopsis
thaliana]
gi|21264030|sp|O82662.1|SUCB_ARATH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=Succinyl-CoA synthetase
beta chain; Short=SCS-beta; Flags: Precursor
gi|3660469|emb|CAA05024.1| succinyl-CoA-ligase beta subunit [Arabidopsis thaliana]
gi|20197853|gb|AAM15283.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
gi|20466482|gb|AAM20558.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
gi|22136422|gb|AAM91289.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
gi|330251911|gb|AEC07005.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Arabidopsis
thaliana]
Length = 421
Score = 364 bits (935), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 187/380 (49%), Positives = 245/380 (64%), Gaps = 34/380 (8%)
Query: 44 NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
N E V+K+QILAGGRGLG F +G K GVH + I KM+G L+TKQT G
Sbjct: 67 NESELVVKSQILAGGRGLGTFKSGLKGGVHIVKR-DEAEEIAGKMLGQVLVTKQTGPQGK 125
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
V+KV + + +++ E YF I+ DR GP++I GGT IE++A K P ++ +PIDV
Sbjct: 126 VVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDV 185
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
GIT+ A + D LA K AD + +
Sbjct: 186 FAGITDEDAAKVVD-------------------------GLAPKAAD--------RKDSI 212
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
+V+KL+ LF D T LEINPL ET ++++ DAK+NFDDNA FRQK +F+ + ++
Sbjct: 213 EQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQE 272
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +
Sbjct: 273 DPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQV 332
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
++AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV++GK
Sbjct: 333 VEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGK 392
Query: 404 RILDESKLPLIFASDLDEAA 423
RIL ES + LI A DLD+AA
Sbjct: 393 RILKESGMKLITADDLDDAA 412
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV++GKRIL ES + LI A DLD+AA + A
Sbjct: 363 ASGIVNAAKEVALKVPVVVRLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKA 418
>gi|351698888|gb|EHB01807.1| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Heterocephalus glaber]
Length = 392
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 238/338 (70%), Gaps = 33/338 (9%)
Query: 84 ILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGT 143
+ ++MIG+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR +NGPV++ SP GG
Sbjct: 76 LAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRAYNGPVLVGSPQGGV 135
Query: 144 DIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSS 203
DIE VAA P L+ PID+ +GI +S AQ
Sbjct: 136 DIEEVAASNPELIFKEPIDIFEGIKDSQAQ------------------------------ 165
Query: 204 LAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINF 263
++A+ L F G LK +A+ +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINF
Sbjct: 166 ---RMAENLGFLGPLKNQASDQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINF 222
Query: 264 DDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKL 323
DDNAEFRQK IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L
Sbjct: 223 DDNAEFRQKEIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFL 282
Query: 324 HGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKS 383
+GG+PANFLD+GGGV E + QAF++++SD V+ ILVN+FGGIVNCA IA G+ AC+
Sbjct: 283 NGGKPANFLDLGGGVRESQVYQAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRE 342
Query: 384 FKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
+L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 343 LELKVPLVVRLEGTNVQEAQNILKNSGLPITAAVDLED 380
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 333 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKNSGLPITAAVDLED 380
>gi|115447367|ref|NP_001047463.1| Os02g0621700 [Oryza sativa Japonica Group]
gi|75261432|sp|Q6K9N6.1|SUCB_ORYSJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=Succinyl-CoA synthetase
beta chain; Short=SCS-beta; Flags: Precursor
gi|47847769|dbj|BAD21546.1| putative succinyl-CoA ligase (GDP-forming) beta-chain,
mitochondrial precursor [Oryza sativa Japonica Group]
gi|113536994|dbj|BAF09377.1| Os02g0621700 [Oryza sativa Japonica Group]
gi|125540340|gb|EAY86735.1| hypothetical protein OsI_08117 [Oryza sativa Indica Group]
gi|125582922|gb|EAZ23853.1| hypothetical protein OsJ_07569 [Oryza sativa Japonica Group]
gi|215704850|dbj|BAG94878.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 422
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/388 (48%), Positives = 252/388 (64%), Gaps = 36/388 (9%)
Query: 38 NILKDL--NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
N LK++ + KE V+K+QILAGGRGLG F +G + GVH ++ + KM+G L+T
Sbjct: 60 NTLKNVFPSEKEIVVKSQILAGGRGLGTFKSGLQGGVHIVK-AEEAESLAAKMLGQILVT 118
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V+KV + + +++ E YF I DR GP++I GGT IE++A K P +
Sbjct: 119 KQTGPQGKIVSKVYLCEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDM 178
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +PIDV +GIT+ A + D LA K AD
Sbjct: 179 IIKVPIDVFKGITDDDAAKVVD-------------------------GLAPKTAD----- 208
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ + +++KL+ LF D T LEINPL ET + ++++ DAK+NFDDNA FRQK IF
Sbjct: 209 ---RQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKEIF 265
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 266 AMRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVG 325
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G +E +++AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLE
Sbjct: 326 GSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLE 385
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV +GKRIL ES + LI A DLD+AA
Sbjct: 386 GTNVDQGKRILKESGMTLITAEDLDDAA 413
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419
>gi|21593189|gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
Length = 421
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/380 (48%), Positives = 244/380 (64%), Gaps = 34/380 (8%)
Query: 44 NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
N E V+K+QILAGGRGLG F +G K GVH + I KM+G L+TKQT G
Sbjct: 67 NESELVVKSQILAGGRGLGTFKSGLKGGVHIVKR-DEAEEIAGKMLGQVLVTKQTGPQGK 125
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
V+KV + + +++ E YF I+ DR GP++I GGT IE++A K P ++ +PIDV
Sbjct: 126 VVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDV 185
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
GIT+ A + D LA K AD + +
Sbjct: 186 FAGITDEDAAKVVD-------------------------GLAPKAAD--------RKDSI 212
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
+V+KL+ LF D T LEINPL ET ++++ DAK+NFDDNA FRQK +F+ + ++
Sbjct: 213 EQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQE 272
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +
Sbjct: 273 DPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQV 332
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
++AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VV LEGTNV++GK
Sbjct: 333 VEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVSLEGTNVEQGK 392
Query: 404 RILDESKLPLIFASDLDEAA 423
RIL ES + LI A DLD+AA
Sbjct: 393 RILKESGMKLITADDLDDAA 412
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VV LEGTNV++GKRIL ES + LI A DLD+AA + A
Sbjct: 363 ASGIVNAAKEVALKVPVVVSLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKA 418
>gi|357150216|ref|XP_003575382.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 186/387 (48%), Positives = 249/387 (64%), Gaps = 36/387 (9%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+K+QILAGGRGLG F +G + GVH ++ + KM+ L+TKQT G V
Sbjct: 70 KEIVVKSQILAGGRGLGTFKSGLQGGVHIVK-AEEAEGLAAKMLNQILVTKQTGPQGKVV 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
KV + + +++ E YF I DR GP++I GGT IE++A K P ++ +PIDV +
Sbjct: 129 GKVYLCEKMSLVNEMYFAITLDRKTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFK 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT+ A + D LA K AD + + +
Sbjct: 189 GITDEDAGKVVD-------------------------GLAPKTAD--------RQASIEQ 215
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL+ LF D T LEINPL ET ++++++ DAK+NFDDNA FRQK IF+ + ++ DP
Sbjct: 216 IKKLYELFCKSDCTMLEINPLAETADKKLVAADAKLNFDDNAAFRQKEIFALRDTTQEDP 275
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++
Sbjct: 276 REVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVE 335
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKRI
Sbjct: 336 AFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRI 395
Query: 406 LDESKLPLIFASDLDEAASLVNACKSF 432
L ES + LI A DLD+AA A K++
Sbjct: 396 LKESGMALITAEDLDDAAE--KAVKAY 420
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMALITAEDLDDAAEKAVKA 419
>gi|326527793|dbj|BAJ88969.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 184/378 (48%), Positives = 244/378 (64%), Gaps = 34/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+K+QILAGGRGLG F +G K GVH ++ + KM+ L+TKQT G V
Sbjct: 70 KEIVVKSQILAGGRGLGTFKSGLKGGVHIVK-AEEAEGLAAKMLNQVLVTKQTGPQGKVV 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
KV + + +++ E YF I DR GP++I GGT IE++A K P + +P+DV +
Sbjct: 129 GKVYLCEKMSLVNEMYFAITLDRKTAGPLIIACAEGGTSIEDLAEKFPDKIVKVPVDVFK 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT+ A + D LA K AD + + +
Sbjct: 189 GITDEDAAKVVD-------------------------GLAPKTAD--------RQSSIEQ 215
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL+ LF D T LEINPL ET ++++++ DAK+NFDDNA FRQK IF+ + ++ DP
Sbjct: 216 IKKLYELFCKTDCTMLEINPLAETADKKLVAADAKLNFDDNAAFRQKEIFALRDTTQEDP 275
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++
Sbjct: 276 REVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVE 335
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKRI
Sbjct: 336 AFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRI 395
Query: 406 LDESKLPLIFASDLDEAA 423
L ES + LI A DLD+AA
Sbjct: 396 LKESGMTLITAEDLDDAA 413
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419
>gi|320581180|gb|EFW95401.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Ogataea
parapolymorpha DL-1]
Length = 425
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 186/391 (47%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L KE VIKAQ L GGRG GHFDNG KSGV ++ + KMIGHKLIT
Sbjct: 63 AYEIAKSLGTKELVIKAQALTGGRGKGHFDNGLKSGVRLIETPEEAKDLASKMIGHKLIT 122
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V V V + RE Y I+ DR + +V+ S GG DIE VA + P
Sbjct: 123 KQTGAAGKEVTAVYVVERKYAKREAYLSIIMDRKNQSTLVVASSEGGVDIEGVAKENPDA 182
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+K P+D +QGI++ LA+ IA L+F + KAA ++KL+ +F
Sbjct: 183 IKKYPVDYNQGISDELAKQIASGLKFSPEAVPKAAETIKKLYQIFKDK------------ 230
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
DATQ+EINPL ET + EV+ +DAK FDDNA FRQ+ +F
Sbjct: 231 ---------------------DATQIEINPLTETVDHEVMCMDAKFGFDDNAAFRQEEVF 269
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S ++++ DP EV ASK+ LN++ +DGNIGCLVNGAGLAMATMD+++L+GG PANFLDVG
Sbjct: 270 SWRDLTQEDPDEVHASKFGLNFIKLDGNIGCLVNGAGLAMATMDVVQLYGGSPANFLDVG 329
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G E+I +AF++I S+ VK I VN+FGGIV C +A+GL+ A K+ L+IP+VVRL+
Sbjct: 330 GTATPETIEEAFKLIISEKGVKAIFVNIFGGIVRCDYVAEGLIAATKNLSLTIPVVVRLQ 389
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GTN+ K+++ ES L L DLDEAA V
Sbjct: 390 GTNLDIAKKLISESGLKLYLFEDLDEAAEKV 420
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ A K+ L+IP+VVRL+GTN+ K+++ ES L L DLDEAA
Sbjct: 368 AEGLIAATKNLSLTIPVVVRLQGTNLDIAKKLISESGLKLYLFEDLDEAA 417
>gi|281208774|gb|EFA82949.1| succinate-CoA ligase [Polysphondylium pallidum PN500]
Length = 441
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 186/381 (48%), Positives = 249/381 (65%), Gaps = 33/381 (8%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTG 102
LN ++ V+KAQILAGGRG G F +G K GVH N+ +++ +KM+G+ L+TKQT G
Sbjct: 68 LNTQDLVVKAQILAGGRGKGVFSSGLKGGVHICNSPEEVKNYAKKMLGYTLVTKQTGPDG 127
Query: 103 INVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
VNK+ +A+ + RE YF I+ DR GPV+I SP GG DIE VA + P + PID
Sbjct: 128 KVVNKIYIAERHYLRREMYFAILMDRKTGGPVMIASPEGGVDIETVARENPSAIFVEPID 187
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
+ +G+ Q + A+ LAQKI +KA
Sbjct: 188 IFKGV--------------QPEQTAR---------------LAQKIG----ISPKNISKA 214
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
++QKL+N F+ D T +EINPL ET +V+ +DAK+NFDDNA FRQK +F + ++
Sbjct: 215 QDQMQKLYNFFIKHDCTLVEINPLAETSSGDVLCMDAKLNFDDNAAFRQKEVFDLRDRTQ 274
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DPREV AS+Y+LNY+G+DG+IGCLVNGAGLAMATMDIIK +GG PANFLDVGGG ++
Sbjct: 275 EDPREVKASEYDLNYIGLDGSIGCLVNGAGLAMATMDIIKHYGGSPANFLDVGGGATQKQ 334
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
+ +A ++ISSD+ VK ILVN+FGGI+ C IA G++ A K + PLVVRL+GTNV+
Sbjct: 335 VTEAIKLISSDTKVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQGTNVESA 394
Query: 403 KRILDESKLPLIFASDLDEAA 423
K+I+++S L LI A DLDEAA
Sbjct: 395 KKIMEDSGLRLIAADDLDEAA 415
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K + PLVVRL+GTNV+ K+I+++S L LI A DLDEAA
Sbjct: 366 ALGIIAAVKELSIKTPLVVRLQGTNVESAKKIMEDSGLRLIAADDLDEAA 415
>gi|224129596|ref|XP_002320625.1| predicted protein [Populus trichocarpa]
gi|222861398|gb|EEE98940.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 244/375 (65%), Gaps = 34/375 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
E V+K+Q+LAGGRGLG F NGF+ GVH I KM+G L+TKQT G V+
Sbjct: 70 ELVVKSQVLAGGRGLGKFKNGFQGGVHIVK-ADKIEETAGKMLGQILVTKQTGSQGKIVS 128
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
KV + + +++ E YF I+ DR GP++I GGT IE++A K P L+ +PIDV +G
Sbjct: 129 KVYLCEKLSLVNEMYFAIMLDRTSAGPLIIACKKGGTSIEDLAEKFPDLIIKVPIDVFKG 188
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
IT+ A + D LA K+AD + + +V
Sbjct: 189 ITDEDAAKVVD-------------------------GLAPKVAD--------RNNSIEQV 215
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+KL+ LF D T LEINP+ ET ++++++ DAK+NFDDNA FRQK IF+ + ++ DPR
Sbjct: 216 KKLYKLFCECDCTLLEINPIAETSDKQLVAADAKLNFDDNAAFRQKEIFALRDPTQEDPR 275
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A+ +LNY+G+DG IGC+VNGAGLAMATMDI+KLHGG PANFLDVGG +E +++A
Sbjct: 276 EVAAAMADLNYIGLDGEIGCMVNGAGLAMATMDIVKLHGGTPANFLDVGGNASEGQVVEA 335
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +GKRIL
Sbjct: 336 FKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQGKRIL 395
Query: 407 DESKLPLIFASDLDE 421
ES + LI A DLD+
Sbjct: 396 KESGMALITAEDLDD 410
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+
Sbjct: 363 ASGIVNAAKQVALKVPVVVRLEGTNVDQGKRILKESGMALITAEDLDD 410
>gi|294460503|gb|ADE75828.1| unknown [Picea sitchensis]
Length = 425
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/376 (48%), Positives = 249/376 (66%), Gaps = 34/376 (9%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE V+K+Q+LAGGRGLG F NGF+ GVH + + I KM+G LIT+QT G V
Sbjct: 73 KEVVVKSQVLAGGRGLGTFKNGFEGGVHIAK-IDEAEDIAAKMLGQILITRQTGPEGKPV 131
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
NKV + + +++ E YF I DR+ GPV+I GGT IE++A K P ++ +PID+ +
Sbjct: 132 NKVYICQKLSLANEMYFAITLDRVSAGPVIISCSKGGTSIEDLAEKYPDMIIKVPIDIFK 191
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT+ +D A +E LA ++AD + + +
Sbjct: 192 GITD---EDAAKVVE----------------------GLAPRLAD--------RDASIDQ 218
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++KL+ LF D T LEINP+ ET + ++++ DAK+NFDDNA +RQK+IFS + S+ DP
Sbjct: 219 IKKLYGLFRETDCTLLEINPIAETVDGQLVAADAKMNFDDNAAYRQKDIFSFRDKSQEDP 278
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV A++ +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +++
Sbjct: 279 REVSAAEADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVE 338
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K +L +P+VVRLEGTNV GK I
Sbjct: 339 AFKILTSDEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVVVRLEGTNVDLGKSI 398
Query: 406 LDESKLPLIFASDLDE 421
L ES L LI A +LD+
Sbjct: 399 LKESGLALITAENLDD 414
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A+ +VNA K +L +P+VVRLEGTNV GK IL ES L LI A +LD+
Sbjct: 367 ASGIVNAAKQVQLKVPVVVRLEGTNVDLGKSILKESGLALITAENLDD 414
>gi|146215968|gb|ABQ10186.1| succinyl-CoA ligase beta subunit [Caragana jubata]
Length = 421
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/408 (47%), Positives = 263/408 (64%), Gaps = 45/408 (11%)
Query: 30 LEDARTATNILKDL--NFKEYVIKAQILAGGRGLGHFDNGFKSGVHF--TNNVQDIPPIL 85
+E+ R A +KD+ N E V+K++ILAGGRGLG F +G + GVH T+ V+D+
Sbjct: 55 IEEVRKA---IKDVFANQNEVVVKSRILAGGRGLGTFKSGLQGGVHIVKTDQVEDLAG-- 109
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
KM+G L+TKQT G V+KV + + +++ E YF I DR GP++I GGT I
Sbjct: 110 -KMLGQILVTKQTGPQGKVVSKVYLCEKLSLVNEMYFAITLDRKTAGPLIIACRKGGTSI 168
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E++A K P ++ +PIDV +GIT+ A + D LA
Sbjct: 169 EDLAEKFPDMIIKVPIDVFEGITDEDAAKVVD-------------------------GLA 203
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
K AD + K+ +V+ L+ LF+ D T LEINP+ ET + ++++ DAK+NFDD
Sbjct: 204 PKGAD--------RNKSIEQVKNLYKLFVESDCTLLEINPIAETADNQLVAADAKLNFDD 255
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA +RQK IF + ++ DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHG
Sbjct: 256 NAAYRQKGIFKLRDTTQEDPREVTAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHG 315
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
G PANFLDVGG +E +++AF+I+++D V+ ILVN+FGGI+ C IA G+VNA K
Sbjct: 316 GTPANFLDVGGNASEGQVVEAFKILTADDKVEAILVNIFGGIMKCDVIASGIVNAAKQVA 375
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFK 433
L +P+VVRLEGTNV +GKRIL ES L LI A DLD+AA A K++K
Sbjct: 376 LKVPVVVRLEGTNVDQGKRILKESGLALITAEDLDDAAQ--KAVKAYK 421
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES L LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVALKVPVVVRLEGTNVDQGKRILKESGLALITAEDLDDAAQKAVKA 419
>gi|18044735|gb|AAH19868.1| Unknown (protein for IMAGE:4996134), partial [Homo sapiens]
Length = 321
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 239/338 (70%), Gaps = 33/338 (9%)
Query: 84 ILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGT 143
+ ++MIG+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG
Sbjct: 5 LAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGV 64
Query: 144 DIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSS 203
DIE VAA P L+ ID+ +GI +S AQ
Sbjct: 65 DIEEVAASNPELIFKEQIDIFEGIKDSQAQ------------------------------ 94
Query: 204 LAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINF 263
++A+ L F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINF
Sbjct: 95 ---RMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINF 151
Query: 264 DDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKL 323
DDNAEFRQK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L
Sbjct: 152 DDNAEFRQKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFL 211
Query: 324 HGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKS 383
+GG+PANFLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+
Sbjct: 212 NGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRE 271
Query: 384 FKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
+L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 272 LELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 309
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 262 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 309
>gi|335775873|gb|AEH58717.1| mitochondrial succinyl-CoA ligase (GDP-forming) subunit beta-like
protein [Equus caballus]
Length = 315
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 238/338 (70%), Gaps = 33/338 (9%)
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
++MIG+ L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DI
Sbjct: 1 KQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRASNGPVLVGSPQGGVDI 60
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VAA P L+ ID+ +GI +S AQ
Sbjct: 61 EEVAATNPELIFKEQIDIIEGIKDSQAQ-------------------------------- 88
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
++A+ L F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDD
Sbjct: 89 -RMAENLGFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDD 147
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NAEFRQK+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+G
Sbjct: 148 NAEFRQKDIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNG 207
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
G+PANFLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +
Sbjct: 208 GKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELE 267
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L +PLVVRLEGTNV E + IL+ S LP+ A DL++AA
Sbjct: 268 LKVPLVVRLEGTNVHEAQNILNNSGLPITSAVDLEDAA 305
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL+ S LP+ A DL++AA
Sbjct: 256 ANGITKACRELELKVPLVVRLEGTNVHEAQNILNNSGLPITSAVDLEDAA 305
>gi|325186785|emb|CCA21331.1| unnamed protein product [Albugo laibachii Nc14]
Length = 439
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 187/377 (49%), Positives = 248/377 (65%), Gaps = 33/377 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ VIKAQ L GGRGLGHF NGFK GVH +D KMIGH L+TKQT + GI V
Sbjct: 71 DVVIKAQALTGGRGLGHFTNGFKGGVHMCTKPEDAKTFASKMIGHTLVTKQTGERGIQVA 130
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
KV++ + V + RE YF I+ DR GPV++ SP+GGT IE+VAA TP L+ ID+ G
Sbjct: 131 KVLLMERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAAATPELIFKQVIDIQTG 190
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
TE D DFL V+KL + K+K A +
Sbjct: 191 PTE----DQVDFL-------------VEKLG----------------CNAESKSKMAEMI 217
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+ L+N+F+ VDAT +EINPL ET +V++ DAKINFDDNA FR K+IF++ + ++ DPR
Sbjct: 218 RNLYNMFIGVDATLVEINPLAETPAGDVLACDAKINFDDNAAFRHKDIFAKRDKTQEDPR 277
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV+AS ++LNY+G+DGNIGCLVNGAGLAMATMDII L GG PANFLDVGGG E + +A
Sbjct: 278 EVEASAFDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATEAQVKKA 337
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F I+++D VK ILVN+FGGI+ C IA G++ A + L P++VRL+GTNV++ ++++
Sbjct: 338 FEILNADDQVKSILVNIFGGIMRCDVIAAGIIAAARDLDLEKPIIVRLQGTNVEKARQLI 397
Query: 407 DESKLPLIFASDLDEAA 423
+S +I A +LD+AA
Sbjct: 398 ADSGFKMIVADNLDDAA 414
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
+ L P++VRL+GTNV++ ++++ +S +I A +LD+AA
Sbjct: 373 RDLDLEKPIIVRLQGTNVEKARQLIADSGFKMIVADNLDDAAQ 415
>gi|330944046|ref|XP_003306299.1| hypothetical protein PTT_19429 [Pyrenophora teres f. teres 0-1]
gi|311316234|gb|EFQ85615.1| hypothetical protein PTT_19429 [Pyrenophora teres f. teres 0-1]
Length = 443
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/393 (46%), Positives = 245/393 (62%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E A I KD+ ++ VIKAQ+LAGGRG G FDNGFK GV + ++ + E+MIG
Sbjct: 58 ESGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILAEQMIG 117
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
HKLITKQT G N V + RE Y I+ DR GPV++ S GG DIE VA
Sbjct: 118 HKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAK 177
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+ P + T P+D+H G+T+ +A++IA L F Q I D
Sbjct: 178 EHPEAIITTPVDIHTGVTDEMARNIATDLGFS----------------------EQCIED 215
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+NFDDNA+FR
Sbjct: 216 -----------AKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFR 264
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +FS ++++ DP EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PAN
Sbjct: 265 QKEVFSWRDLTQEDPEEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGTPAN 324
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E+I QAF +I+SD V I VN+FGGIV C IAKGL+ + L P+
Sbjct: 325 FLDVGGGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPV 384
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+ RL+GTN++ +++L++S L + DL AA
Sbjct: 385 IARLQGTNMEAAQKLLNDSGLKIFSIDDLQAAA 417
>gi|189205030|ref|XP_001938850.1| succinyl-CoA ligase beta-chain [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985949|gb|EDU51437.1| succinyl-CoA ligase beta-chain [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 443
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/393 (46%), Positives = 245/393 (62%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E A I KD+ ++ VIKAQ+LAGGRG G FDNGFK GV + ++ + E+MIG
Sbjct: 58 ESGAEAEKIAKDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILAEQMIG 117
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
HKLITKQT G N V + RE Y I+ DR GPV++ S GG DIE VA
Sbjct: 118 HKLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAK 177
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+ P + T P+D+H G+T+ +A++IA L F Q I D
Sbjct: 178 EHPEAIITTPVDIHTGVTDEMARNIATDLGFS----------------------EQCIED 215
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+NFDDNA+FR
Sbjct: 216 -----------AKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFR 264
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +FS ++++ DP EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PAN
Sbjct: 265 QKEVFSWRDLTQEDPEEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGTPAN 324
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E+I QAF +I+SD V I VN+FGGIV C IAKGL+ + L P+
Sbjct: 325 FLDVGGGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPV 384
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+ RL+GTN++ +++L++S L + DL AA
Sbjct: 385 IARLQGTNMEAAQKLLNDSGLKIFSIDDLQAAA 417
>gi|322788071|gb|EFZ13896.1| hypothetical protein SINV_14509 [Solenopsis invicta]
Length = 288
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 224/310 (72%), Gaps = 34/310 (10%)
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
++ M+GH+LITKQT K GI V K+M+A+SV+I RETY CI+ DR HNGPV+I SP+GG D
Sbjct: 12 VKNMLGHRLITKQTSKDGILVQKIMIAESVDIARETYVCILMDRQHNGPVLIASPAGGMD 71
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEF-QGDLKAKAATEVQKLWNLFLSS 203
IE VA K P +KT+ +D++ GI + +A+D+ FL F + D+ KA E++ LW
Sbjct: 72 IETVAEKHPEQIKTVSLDIYHGIDDEIAKDVCIFLGFSKPDILNKAIYELKNLW------ 125
Query: 204 LAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINF 263
LF+ +DA Q+EINPLVET +++V++VDAKI F
Sbjct: 126 ---------------------------KLFVDIDALQVEINPLVETTDKQVVAVDAKITF 158
Query: 264 DDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKL 323
DDNA+FRQ+++F+ +VSE DPREVDAS++NLNY+GMDGNIGCLVNGAGLAMATMDIIKL
Sbjct: 159 DDNAQFRQQDLFALEDVSEKDPREVDASRFNLNYIGMDGNIGCLVNGAGLAMATMDIIKL 218
Query: 324 HGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKS 383
+GG PANFLDVGG V E+ + QAFRI+S D VK ILVNVFGGIVNC TIAKG++ A ++
Sbjct: 219 NGGSPANFLDVGGNVKEDQVFQAFRILSEDPKVKVILVNVFGGIVNCVTIAKGIIAASQN 278
Query: 384 FKLSIPLVVR 393
L IPLVVR
Sbjct: 279 LGLKIPLVVR 288
>gi|328875764|gb|EGG24128.1| succinate-CoA ligase [Dictyostelium fasciculatum]
Length = 435
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/388 (48%), Positives = 244/388 (62%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I + LN ++ VIKAQILAGGRG G F +G K GVH ++ + +KM+G+ LIT
Sbjct: 55 AEKISEVLNAQDLVIKAQILAGGRGKGIFTSGLKGGVHICSDAAQVKNYAKKMLGYTLIT 114
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G VN+V +A+ + RE YF I+ DR GPV+I SP GG DIE VA + P+
Sbjct: 115 KQTGPEGKVVNQVYIAERHYLRREMYFAILMDRKTGGPVMIGSPEGGMDIETVAKENPNA 174
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID+ QG+ E L AK + +
Sbjct: 175 IYVEAIDIMQGVKP----------EQTARLAAKLGISPKNI------------------- 205
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
KA ++QKL++ F+ D T +EINPL ET EV+ +DAK+NFDDNA FRQK IF
Sbjct: 206 ----PKAQDQMQKLYDFFIKNDCTLVEINPLAETATGEVMCMDAKLNFDDNAAFRQKEIF 261
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ DPREV AS+Y+LNY+G+DG IGCLVNGAGLAMATMDIIK +GG PANFLDVG
Sbjct: 262 ELRDRSQEDPREVKASEYDLNYIGLDGTIGCLVNGAGLAMATMDIIKHYGGNPANFLDVG 321
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG ++ + +A ++ISSD VK ILVN+FGGI+ C IA G++ A K + PLVVRL+
Sbjct: 322 GGATQKQVTEAIKLISSDKKVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQ 381
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ K+I++ES L LI A DLDEAA
Sbjct: 382 GTNVEYAKKIMEESGLRLIAADDLDEAA 409
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K + PLVVRL+GTNV+ K+I++ES L LI A DLDEAA
Sbjct: 360 ALGIIAAVKELSIKTPLVVRLQGTNVEYAKKIMEESGLRLIAADDLDEAA 409
>gi|407927250|gb|EKG20148.1| Succinyl-CoA synthetase beta subunit [Macrophomina phaseolina MS6]
Length = 444
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 182/388 (46%), Positives = 247/388 (63%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K ++ + VIKAQ+LAGGRG G FDNGFK GV + + + E+MIGHKLIT
Sbjct: 64 AEAVAKSISGDDMVIKAQVLAGGRGKGTFDNGFKGGVRVIYSPTEARILAEQMIGHKLIT 123
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + RE Y I+ DR GPV++ S GG DIE VA + P
Sbjct: 124 KQTGAQGRLCNSVFIVERKFARREFYLAILMDRATQGPVIVASSQGGMDIETVAKEHPEA 183
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T ID+H+G+T+ +A+DIA L F Q + D
Sbjct: 184 IITTKIDIHKGVTDDIARDIAVQLGFS----------------------EQCVED----- 216
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+NFDDNA+FRQ+ +F
Sbjct: 217 ------AKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQQEVF 270
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S +V++ DP EV A++ NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFLDVG
Sbjct: 271 SWRDVTQEDPDEVKAAQSNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 330
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E+I QAF +I+SD V I VN+FGGIV C IAKGL++ +S L IP++ RL+
Sbjct: 331 GGATPEAIKQAFELITSDPKVTAIFVNIFGGIVRCDAIAKGLISVVQSMNLRIPIIARLQ 390
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN++ ++++ES L + DL AA
Sbjct: 391 GTNMEAAHKLINESGLKIFSIDDLQNAA 418
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ +S L IP++ RL+GTN++ ++++ES L + DL AA
Sbjct: 369 AKGLISVVQSMNLRIPIIARLQGTNMEAAHKLINESGLKIFSIDDLQNAA 418
>gi|223993443|ref|XP_002286405.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335]
gi|220977720|gb|EED96046.1| precursor of synthetase [Thalassiosira pseudonana CCMP1335]
Length = 419
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 179/388 (46%), Positives = 248/388 (63%), Gaps = 32/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A +I + K VIKAQ+L+GGRGLG F NGFK GVH + M+G +L+T
Sbjct: 37 AEHIFTTMMNKHVVIKAQVLSGGRGLGTFKNGFKGGVHMVTRKGQAAEMASSMLGQELVT 96
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQ P GI KV++ + + + E Y I+ DR GP+++ SP GGT IE+VA P L
Sbjct: 97 KQAP-NGILCQKVLLMERMYMRNEMYLSILMDRASGGPLLVGSPRGGTSIEDVAHSNPEL 155
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID++ G+T A + +A+ I LE
Sbjct: 156 IFTEPIDINVGLTVEAA-----------------------------NRMARNIG--LEEG 184
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AKA T + L+++FL D TQ+E+NPL ET E +V+ DAK+NFDDNAEFRQK+IF
Sbjct: 185 TESHAKAVTLINNLYDMFLGCDCTQVEVNPLAETPEGDVVVCDAKVNFDDNAEFRQKSIF 244
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + S+ DPREV+ASKY+LNY+G+DGNIGC+VNGAGLAM+TMDII+L GG PANFLDVG
Sbjct: 245 ERRDFSQEDPREVEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVG 304
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG NE+ + +AF +++SD V+ ILVN+FGGI+ C IA G++NA + + PLV+RL+
Sbjct: 305 GGANEKQVQKAFELLNSDDKVQAILVNIFGGIMRCDVIATGIINAAQEIGIKKPLVIRLQ 364
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV +++++ +I A DL++AA
Sbjct: 365 GTNVDAARKLIEGCGFRMILAEDLEDAA 392
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA + + PLV+RL+GTNV +++++ +I A DL++AA
Sbjct: 343 ATGIINAAQEIGIKKPLVIRLQGTNVDAARKLIEGCGFRMILAEDLEDAA 392
>gi|154422173|ref|XP_001584099.1| adhesin protein AP51-3 [Trichomonas vaginalis G3]
gi|121918344|gb|EAY23113.1| adhesin protein AP51-3, putative [Trichomonas vaginalis G3]
Length = 409
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 243/395 (61%), Gaps = 37/395 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKM 88
ART A K + VIKAQ+ GGRG GH+ + GFKSGVHF + + I ++M
Sbjct: 36 ARTPEEAAAAFKKIGLPAAVIKAQVYCGGRGKGHWKETGFKSGVHFVKSADEAAKIAKEM 95
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+GH L+TKQT K G+ VM++ V + RE YF I+ DR PVVI S GG +IE V
Sbjct: 96 LGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEV 155
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
AAK P + +D QGITE +AQ I+ L G A E
Sbjct: 156 AAKHPEKIHKFVLDGVQGITEEVAQTISKKLGLTGK-----AYE---------------- 194
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
E+QKLW LF+ DATQ+E+NPL ET + +I+VD+K NFDD+A
Sbjct: 195 ------------NGVEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAH 242
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+RQK IF ++ + +P E+ A KY LNYV +DGN+ CLVNGAGLAMATMD+IKL GG+P
Sbjct: 243 YRQKQIFGYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDP 302
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLD+GG +E ++ + F IISS S+VK ILVN+FGGIV C +A G++ A K L +
Sbjct: 303 ANFLDLGGAASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKV 362
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV GK++L ES LP+I A +L +A
Sbjct: 363 PLVVRLEGTNVDAGKKLLRESGLPIIPADNLTDAG 397
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA ++ A K L +PLVVRLEGTNV GK++L ES LP+I A +L +A
Sbjct: 348 AAGVIAAFKKVGLKVPLVVRLEGTNVDAGKKLLRESGLPIIPADNLTDAG 397
>gi|452823530|gb|EME30540.1| succinyl-CoA synthetase beta subunit [Galdieria sulphuraria]
Length = 436
Score = 354 bits (909), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/431 (43%), Positives = 264/431 (61%), Gaps = 41/431 (9%)
Query: 6 NQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFD 65
+QQ+ + + P S V T +E+A+ A + + N VIKAQ+LAGGRGLGHF
Sbjct: 45 SQQLLSKYGIQVPKSKVAKT----VEEAKKAAEEIGNGN--PVVIKAQVLAGGRGLGHFS 98
Query: 66 NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIV 125
N F+ GVH + + +M+G LITKQT G + +++A+ + +E Y +
Sbjct: 99 NNFQGGVHIVETPEKAAQVASQMLGQTLITKQTGPQGKPCHSILIAEKIASKKELYLALT 158
Query: 126 QDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDL 185
DR GPV I+S GGT IE++A + P+ +KTI +D+ G+TE + + QG
Sbjct: 159 YDRTVQGPVAIVSSRGGTSIEDIAKEDPNAIKTITLDIRMGMTEEKTKQV-----IQG-- 211
Query: 186 KAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINP 245
L L+ +A +V+KL+ F D + LEINP
Sbjct: 212 --------------------------LNISSSLQQQAMDQVKKLYQFFYDKDVSMLEINP 245
Query: 246 LVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIG 305
LVET++ ++ VD K+NFD NA+FRQ +IF+ ++++ DPREV A + LNY+G+DG+IG
Sbjct: 246 LVETNDGRLVCVDTKVNFDKNADFRQADIFAMRDITQEDPREVRADQVGLNYIGLDGSIG 305
Query: 306 CLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFG 365
CLVNGAGLAMATMD+IKLHGG PANFLDVGG EE + +AF+I++ D +VK ILVN+FG
Sbjct: 306 CLVNGAGLAMATMDVIKLHGGNPANFLDVGGSATEEQVTEAFKILTGDQHVKAILVNIFG 365
Query: 366 GIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
GI+ C IA+G+V A + L+IPLVVRL+G V++ K IL +S+L +I A DL+EAA
Sbjct: 366 GIMRCDVIAQGIVQAAHNISLNIPLVVRLQGNQVEQAKAILKQSQLAVIAADDLEEAAE- 424
Query: 426 VNACKSFKLSI 436
A +S K +I
Sbjct: 425 -KAVQSAKQTI 434
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A + L+IPLVVRL+G V++ K IL +S+L +I A DL+EAA
Sbjct: 374 AQGIVQAAHNISLNIPLVVRLQGNQVEQAKAILKQSQLAVIAADDLEEAA 423
>gi|219117017|ref|XP_002179303.1| beta chain succinyl-coa synthetase synthetase [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217409194|gb|EEC49126.1| beta chain succinyl-coa synthetase synthetase [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 443
Score = 354 bits (908), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 178/378 (47%), Positives = 244/378 (64%), Gaps = 32/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
K+ VIKAQ+L+GGRGLG F NGFK GVH M+G++L+TKQ P GI
Sbjct: 71 KDIVIKAQVLSGGRGLGTFKNGFKGGVHMVTKPGQAREFAAAMLGNELVTKQAP-NGIVC 129
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
NKV++ + + + RE Y I+ DR GP+++ SP GGT IE+VAA P ++ T PID+ +
Sbjct: 130 NKVLLMERMYMRREMYLSILMDRGSQGPLLVASPRGGTSIEDVAATNPEVIFTQPIDITE 189
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+T A +A L LE KA
Sbjct: 190 GLTPEGAHRMASNLG-------------------------------LEEGSTGHDKAVIL 218
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+Q L+++F++ D TQ+E+NPL ET E +++ DAK+NFDDNAEFRQ +IF++ + S+ D
Sbjct: 219 MQNLYSMFIACDCTQVEVNPLAETPEGDIVVCDAKVNFDDNAEFRQSSIFARRDTSQEDV 278
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REVDASKY+LNY+G++G IGC+VNGAGLAM+TMDII+L GG PANFLDVGGG NE + +
Sbjct: 279 REVDASKYDLNYIGLEGTIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANETQVQK 338
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF I++SDS VK ILVN+FGGI+ C IA G++NA K ++ P+V+RL+GTNV E K +
Sbjct: 339 AFEILNSDSQVKAILVNIFGGIMRCDVIATGIINAAKEIGINKPIVIRLQGTNVNEAKTL 398
Query: 406 LDESKLPLIFASDLDEAA 423
++ +I A DL++AA
Sbjct: 399 IEGCGFRMILAEDLEDAA 416
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA K ++ P+V+RL+GTNV E K +++ +I A DL++AA
Sbjct: 367 ATGIINAAKEIGINKPIVIRLQGTNVNEAKTLIEGCGFRMILAEDLEDAA 416
>gi|303280569|ref|XP_003059577.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459413|gb|EEH56709.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 424
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 183/413 (44%), Positives = 254/413 (61%), Gaps = 41/413 (9%)
Query: 9 IANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGF 68
+A + V P + D+V A+ + E V+K+Q+LAGGRGLG F +G
Sbjct: 43 MAQYGVRVPPGIACTTPDEVAAAAAKLSGE------SGEVVVKSQVLAGGRGLGTFTSGL 96
Query: 69 KSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDR 128
K GVH + + EKM+G L+TKQT G VN +MVA+ + + E YF I+ DR
Sbjct: 97 KGGVHIVP-AAEAKTLSEKMLGQTLVTKQTGAAGKPVNTLMVAEKMKLVNEMYFAILLDR 155
Query: 129 LHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAK 188
GP++I GGT IE++A P + + +DV++G+T A ++A L+ G
Sbjct: 156 ASAGPMIIACSEGGTSIEDLAESHPEKIIKMKVDVNRGLTTDQALELARGLKVSGS---- 211
Query: 189 AATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVE 248
AD AA +++ L+ +F D T LE+NPL E
Sbjct: 212 --------------------AD----------DAAAQLKALYAVFEKSDCTMLEVNPLAE 241
Query: 249 TDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLV 308
TDE+ +I+ DAK+NFDDNAE+RQ+ +F+ + S+ DPREV A K++LNY+G+DGNIGC+V
Sbjct: 242 TDEKLLIAADAKLNFDDNAEYRQRELFALRDHSQEDPREVAAGKFDLNYIGLDGNIGCMV 301
Query: 309 NGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIV 368
NGAGLAMATMDII LHG PANFLDVGG +EE +++AF+I+++D VK +LVN+FGGI+
Sbjct: 302 NGAGLAMATMDIISLHGASPANFLDVGGNASEEQVVEAFKILTADVKVKALLVNIFGGIM 361
Query: 369 NCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
C IA G+VNA K + +PLVVRLEGTNV+ GK IL ES L ++ A DLD+
Sbjct: 362 KCDVIASGIVNAAKQVGIKVPLVVRLEGTNVEAGKEILAESGLNIVSADDLDD 414
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A+ +VNA K + +PLVVRLEGTNV+ GK IL ES L ++ A DLD+
Sbjct: 367 ASGIVNAAKQVGIKVPLVVRLEGTNVEAGKEILAESGLNIVSADDLDD 414
>gi|451996949|gb|EMD89415.1| hypothetical protein COCHEDRAFT_1141622 [Cochliobolus
heterostrophus C5]
Length = 443
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/388 (46%), Positives = 244/388 (62%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I +D+ ++ VIKAQ+LAGGRG G FDNGFK GV + ++ + E+MIGHKLIT
Sbjct: 63 AEKIAQDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREAAILAEQMIGHKLIT 122
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + RE Y I+ DR GPV++ S GG DIE VA + P
Sbjct: 123 KQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEA 182
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+H+G+T+ +A++IA L F Q I D
Sbjct: 183 IITTPIDIHKGVTDEMARNIATELGFS----------------------EQCIED----- 215
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+NFDDNA+FRQK +F
Sbjct: 216 ------AKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVF 269
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++++ DP EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 270 DWRDITQEDPDEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 329
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E+I QAF +I+SD V I VN+FGGIV C IAKGL+ + L P++ RL+
Sbjct: 330 GGATPEAIRQAFELITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVIARLQ 389
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN++ ++++++S L + DL AA
Sbjct: 390 GTNMEAAQKLINDSGLKIFSIDDLQGAA 417
>gi|396459857|ref|XP_003834541.1| similar to succinyl-CoA ligase subunit beta [Leptosphaeria maculans
JN3]
gi|312211090|emb|CBX91176.1| similar to succinyl-CoA ligase subunit beta [Leptosphaeria maculans
JN3]
Length = 443
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/392 (46%), Positives = 245/392 (62%), Gaps = 33/392 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+A A I KD+ ++ VIKAQ+LAGGRG G FDNGFK GV + ++ + ++MIGH
Sbjct: 59 NAAEAEQIAKDIGGEDVVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREASILADQMIGH 118
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
KLITKQT G N V + RE Y I+ DR GPV++ S GG DIE VA +
Sbjct: 119 KLITKQTGAAGRLCNSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIEAVAKE 178
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
P + T PID+H G+T+ +A++IA L F Q I D
Sbjct: 179 HPEAIITTPIDIHVGVTDDMARNIATELGFS----------------------EQCIED- 215
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+NFDDNA+FRQ
Sbjct: 216 ----------AKDTIQKLYRVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQ 265
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K +FS +V++ D EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANF
Sbjct: 266 KEVFSWRDVTQEDADEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANF 325
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG E+I QAF +I+SD V I VN+FGGIV C IAKGL+ + L P++
Sbjct: 326 LDVGGGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVI 385
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ ++L++S L + DL AA
Sbjct: 386 ARLQGTNMEQAHKLLNDSGLKIFSIDDLQAAA 417
>gi|2351689|gb|AAB68611.1| adhesin protein AP51-3, partial [Trichomonas vaginalis]
Length = 405
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 187/395 (47%), Positives = 242/395 (61%), Gaps = 37/395 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKM 88
ART A K + VIKAQ+ GGRG GH+ + GFKSGVHF + + I ++M
Sbjct: 32 ARTPEEAAAAFKKIGLPAAVIKAQVYCGGRGKGHWKETGFKSGVHFVKSADEAAKIAKEM 91
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+GH L+TKQT K G+ VM++ V + RE YF I+ DR PVVI S GG +IE V
Sbjct: 92 LGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEV 151
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
AAK P + +D QGITE +AQ I+ L G A E
Sbjct: 152 AAKHPEKIHKFVLDGVQGITEEVAQTISKKLGLTGK-----AYE---------------- 190
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
E+QKLW LF+ DATQ+E+NPL ET + +I+VD+K NFDD+A
Sbjct: 191 ------------NGVEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAH 238
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+RQK IF ++ + +P E+ A KY LNYV +DGN+ CLVNGAGLAMATMD+IKL GG+P
Sbjct: 239 YRQKQIFGYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDP 298
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLD+GG +E ++ + F IISS S+VK ILVN+FGGIV C + G++ A K L +
Sbjct: 299 ANFLDLGGAASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVRAGVIAAFKKVGLKV 358
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV GK++L ES LP+I A +L +A
Sbjct: 359 PLVVRLEGTNVDAGKKLLRESGLPIIPADNLTDAG 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 471 ASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L +PLVVRLEGTNV GK++L ES LP+I A +L +A
Sbjct: 345 AGVIAAFKKVGLKVPLVVRLEGTNVDAGKKLLRESGLPIIPADNLTDAG 393
>gi|451847869|gb|EMD61176.1| hypothetical protein COCSADRAFT_124698 [Cochliobolus sativus
ND90Pr]
Length = 443
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 179/388 (46%), Positives = 243/388 (62%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I +D+ ++ VIKAQ+LAGGRG G FDNGFK GV + ++ + E+MIGHKLIT
Sbjct: 63 AEKIAQDIGGEDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREAAILAEQMIGHKLIT 122
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G + V + RE Y I+ DR GPV++ S GG DIE VA + P
Sbjct: 123 KQTGAAGRLCSSVFIVDRKFARREFYLAILMDRASQGPVIVASSQGGMDIETVAKEHPEA 182
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+H+G+T+ +A+ IA L F Q I D
Sbjct: 183 IITTPIDIHKGVTDEMARSIATELGFS----------------------EQCIED----- 215
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+NFDDNA+FRQK +F
Sbjct: 216 ------AKDTIQKLYKVFMEKDATQIEINPLSETTDHQVLAMDAKLNFDDNADFRQKEVF 269
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++++ DP EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 270 DWRDITQEDPDEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLDVG 329
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E+I QAF +I+SD V I VN+FGGIV C IAKGL+ + L P++ RL+
Sbjct: 330 GGATPEAIRQAFELITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVQEMNLKTPVIARLQ 389
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN++ ++++++S L + DL AA
Sbjct: 390 GTNMEAAQKLINDSGLKIFSIDDLQGAA 417
>gi|290993522|ref|XP_002679382.1| succinate-CoA ligase (ADP-forming) [Naegleria gruberi]
gi|284092998|gb|EFC46638.1| succinate-CoA ligase (ADP-forming) [Naegleria gruberi]
Length = 441
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/407 (45%), Positives = 260/407 (63%), Gaps = 43/407 (10%)
Query: 17 KPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTN 76
K +++ T K C E N +Y++KAQ+LAGGRG G F +G K GV
Sbjct: 53 KVLTSATETKKACTELG----------NHVDYIVKAQVLAGGRGRGKFKSGLKGGVQKAL 102
Query: 77 NVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVI 136
++ + + KM+G L+TKQT G NKV V + + RE Y I+ DR GPV+I
Sbjct: 103 SIGEAEDYVSKMLGQVLVTKQTGAEGKPCNKVYVQERLYARRELYLAILLDRQSGGPVLI 162
Query: 137 ISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKL 196
S GG IE+VA ++P + TIPI V +G+ +S A+
Sbjct: 163 GSTQGGMAIEDVARESPEEIHTIPISVKEGLHKSQAE----------------------- 199
Query: 197 WNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVIS 256
LA+K L FR +L +A ++ KL+NLF+ D+ LEINPL+ET + +VI
Sbjct: 200 ------GLARK----LGFRDELLDQAVDQITKLYNLFMKTDSVLLEINPLIETADGKVIC 249
Query: 257 VDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMA 316
DAK+N DDNA FRQK +F+ ++++ DPR+V A+KY+LNY+G+DGNIGC+VNGAGLAMA
Sbjct: 250 ADAKVNIDDNAFFRQKELFALKDITQEDPRDVRAAKYDLNYIGLDGNIGCIVNGAGLAMA 309
Query: 317 TMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKG 376
TMDIIKL+GG+PANFLDVGGG +++ I++A +I++ D +V+ ILVN+FGGI+ C IA+G
Sbjct: 310 TMDIIKLYGGDPANFLDVGGGASQDQIVEALKILNDDHHVQAILVNIFGGIMRCDLIAQG 369
Query: 377 LVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L+NA K +L P+VVRL+GTNVQ+ K IL +S + +I A +L++AA
Sbjct: 370 LINAMKETELRAPVVVRLQGTNVQQAKDILAKSGIRVIPADNLEDAA 416
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+NA K +L P+VVRL+GTNVQ+ K IL +S + +I A +L++AA
Sbjct: 367 AQGLINAMKETELRAPVVVRLQGTNVQQAKDILAKSGIRVIPADNLEDAA 416
>gi|339237429|ref|XP_003380269.1| succinyl-CoA synthetase beta chain [Trichinella spiralis]
gi|316976921|gb|EFV60115.1| succinyl-CoA synthetase beta chain [Trichinella spiralis]
Length = 470
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 177/379 (46%), Positives = 237/379 (62%), Gaps = 33/379 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
EYV+KAQILAGGRG G FDNG + GV + + ++KM+ H+L T QT GI V
Sbjct: 107 EYVVKAQILAGGRGKGKFDNGLEGGVKLARSPKQAIEYVKKMVNHRLFTNQTSSDGILVK 166
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
KVM+A+SV I RE Y I+ DR P++I SPSGG DIE V+ K+P L+ +PID+ G
Sbjct: 167 KVMIAESVPIWREGYLAIMVDRTLESPLIIASPSGGVDIEEVSVKSPELMLKLPIDLEVG 226
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
++ ++A KIA FL+F + KA E+
Sbjct: 227 LS---------------------------------PAVALKIAKFLQFSENATEKAKDEI 253
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
L+ +F+ DAT +E+NP+ ET +V VDAK++FDDNA FRQ+ IF+ +S+ DPR
Sbjct: 254 LHLYEMFVRTDATMIEVNPICETTNSDVYLVDAKLHFDDNASFRQREIFALTNLSDRDPR 313
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
E +A Y LN+V MDGNIGCLVNGAGLAMATMD+IKLHGGEPANFLDVGG + +
Sbjct: 314 ENEAESYGLNFVSMDGNIGCLVNGAGLAMATMDLIKLHGGEPANFLDVGGSADASQVSHG 373
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
IIS D VK I VN+FGGIVNC TIA+G++ A + +P+++RLEGT+ KR+L
Sbjct: 374 IEIISHDPKVKAIFVNIFGGIVNCQTIARGVIAAMEKIGSRLPIILRLEGTDDLTAKRLL 433
Query: 407 DESKLPLIFASDLDEAASL 425
ES ++ A++++ SL
Sbjct: 434 RESHQTMLMANNMEHGVSL 452
>gi|123477791|ref|XP_001322061.1| Succinyl-CoA ligase beta-chain, hydrogenosomal precursor
[Trichomonas vaginalis G3]
gi|121904900|gb|EAY09838.1| Succinyl-CoA ligase beta-chain, hydrogenosomal precursor
[Trichomonas vaginalis G3]
Length = 407
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 183/401 (45%), Positives = 245/401 (61%), Gaps = 35/401 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLI 94
A + +N VIKAQ+ GGRG GH+ + GFKSGVHF + + I ++M+GH L+
Sbjct: 40 AAEAFRKMNLPAAVIKAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLV 99
Query: 95 TKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPH 154
TKQT K G+ VM++ V + RE YF I+ DR PVVI S GG +IE VAA P
Sbjct: 100 TKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPE 159
Query: 155 LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEF 214
+ +D +GITE +A++I+ L G K ++
Sbjct: 160 KIHKFVLDGVEGITEEVAKNISTKLGLTG-----------KAYD---------------- 192
Query: 215 RGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNI 274
E+QKLW LF+ DATQ+E+NPL ET + +I+VD+K NFDD+A +RQK I
Sbjct: 193 ------NGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQI 246
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
F ++ + P E+ A KY LNYV +DGN+ CLVNGAGLAMATMD+IKL GG+PANFLD+
Sbjct: 247 FGYRDLKQVSPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDL 306
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GG +E ++ + F IIS S+VK ILVN+FGGIV C +A G++ A K L +PLVVRL
Sbjct: 307 GGAASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRL 366
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACKSFKL 434
EGTNV+ GK+++ ES LP+I A +L +A V A K K
Sbjct: 367 EGTNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKGEKF 407
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA ++ A K L +PLVVRLEGTNV+ GK+++ ES LP+I A +L +A
Sbjct: 346 AAGVIAAFKKVGLKVPLVVRLEGTNVEAGKKLIRESGLPIISADNLTDAG 395
>gi|196232107|ref|ZP_03130962.1| succinyl-CoA synthetase, beta subunit [Chthoniobacter flavus
Ellin428]
gi|196223829|gb|EDY18344.1| succinyl-CoA synthetase, beta subunit [Chthoniobacter flavus
Ellin428]
Length = 396
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 191/393 (48%), Positives = 244/393 (62%), Gaps = 33/393 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + + L KE+V+KAQI AGGRG G F NGFK GV T+++ + + +M+G L+T
Sbjct: 31 AVAVAEKLGTKEFVVKAQIHAGGRGKGTFKNGFKGGVQITDSIGKVRELATQMLGQVLVT 90
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G VNKV++A+ I RE YF I+ DR PVVI S GG DIE+VA TP
Sbjct: 91 HQTGPEGKQVNKVLIAEPATIARELYFAILLDRASGAPVVIASTEGGVDIESVAEHTPEK 150
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PI G+ FQ +KIA L
Sbjct: 151 IFREPIHPTLGLQP-----------FQ----------------------TRKIARALGLS 177
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G AA ++ LFL+ D +Q+E+NPLV TD+ E++++DAK NFDDNA +RQ I
Sbjct: 178 GAQINAAAKLFTNMFKLFLARDCSQIEVNPLVVTDKGEILALDAKFNFDDNALYRQPEIV 237
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + SE DPREV AS+YNLNY+G+DGNI CLVNGAGLAMATMDII+ GG+PANFLDVG
Sbjct: 238 ALRDKSEEDPREVAASEYNLNYIGLDGNIACLVNGAGLAMATMDIIQYAGGKPANFLDVG 297
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +++ + AF+II SD NV+ ILVN+FGGI++C IA G+V A K L IPLVVRLE
Sbjct: 298 GGASKDQVTAAFKIILSDPNVEGILVNIFGGIMDCNVIATGIVAAAKEVGLKIPLVVRLE 357
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
G NV+ GK+ L ES L LI ASDL +AA + A
Sbjct: 358 GNNVEAGKKTLAESGLALISASDLADAAKKIVA 390
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L IPLVVRLEG NV+ GK+ L ES L LI ASDL +AA +
Sbjct: 336 ATGIVAAAKEVGLKIPLVVRLEGNNVEAGKKTLAESGLALISASDLADAAKKIV 389
>gi|1711579|sp|Q03184.1|SUCB_TRIVA RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
hydrogenosomal; AltName: Full=Succinyl-CoA synthetase
beta chain; Short=SCS-beta; Flags: Precursor
gi|162521|gb|AAA30326.1| succinyl-CoA synthetase beta-subunit [Trichomonas vaginalis]
Length = 407
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 183/401 (45%), Positives = 246/401 (61%), Gaps = 35/401 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLI 94
A + +N VIKAQ+ GGRG GH+ + GFKSGVHF + + I ++M+GH L+
Sbjct: 40 AAEAFRKMNLPAAVIKAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLV 99
Query: 95 TKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPH 154
TKQT K G+ VM++ V + RE YF I+ DR PVVI S GG +IE VAA P
Sbjct: 100 TKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPE 159
Query: 155 LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEF 214
+ +D +GITE +A++I+ L G K ++
Sbjct: 160 KIHKFVLDGVEGITEEVAKNISTKLGLTG-----------KAYD---------------- 192
Query: 215 RGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNI 274
E+QKLW LF+ DATQ+E+NPL ET + +I+VD+K NFDD+A +RQK I
Sbjct: 193 ------NGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQI 246
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
F ++ + +P E+ A KY LNYV +DGN+ CLVNGAGLAMATMD+IKL GG+PANFLD+
Sbjct: 247 FGYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDL 306
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GG +E ++ + F IIS S+VK ILVN+FGGIV C +A G++ A K L +PLVVRL
Sbjct: 307 GGAASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRL 366
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACKSFKL 434
EGTNV+ GK+++ ES LP+I A +L +A V A K K
Sbjct: 367 EGTNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKGEKF 407
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA ++ A K L +PLVVRLEGTNV+ GK+++ ES LP+I A +L +A
Sbjct: 346 AAGVIAAFKKVGLKVPLVVRLEGTNVEAGKKLIRESGLPIISADNLTDAG 395
>gi|302836393|ref|XP_002949757.1| succinate-coa ligase beta chain, succinyl-CoA synthetase
mitochondrial precursor [Volvox carteri f. nagariensis]
gi|300265116|gb|EFJ49309.1| succinate-coa ligase beta chain, succinyl-CoA synthetase
mitochondrial precursor [Volvox carteri f. nagariensis]
Length = 421
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 180/405 (44%), Positives = 253/405 (62%), Gaps = 41/405 (10%)
Query: 7 QQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN 66
Q ++ F V P + D+V A + D N E V+K+QILAGGRGLG F N
Sbjct: 38 QLMSKFGVNVPPGIPAKTLDEVA-----QAVEQMADEN-GEVVLKSQILAGGRGLGRFTN 91
Query: 67 GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQ 126
G + GVH + + + ++M+G L+TKQT G VN +++A+ + + RE YF I+
Sbjct: 92 GLQGGVHIVPKARALE-LAKQMLGGTLVTKQTGPAGKPVNTLLIARKMKLRREMYFAILL 150
Query: 127 DRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLK 186
DR GP++I GGT IE++A K P + +P+D GIT++ A + + L GD
Sbjct: 151 DRKTAGPMMIGCSEGGTSIEDLAEKYPEKIIKVPVDSRTGITDAQAAKMVEGLRVTGD-- 208
Query: 187 AKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPL 246
KAKAA +++ L++LF+ D T +E+NPL
Sbjct: 209 --------------------------------KAKAAQQIKALYDLFVKCDCTMVEVNPL 236
Query: 247 VETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGC 306
E+ + ++I+ DAK+ FDDNA +R K IF + S+ DPREV A+KY+LNY+G+DG+IGC
Sbjct: 237 AESLDGQLIAADAKLGFDDNAAYRHKEIFDLKDESQIDPREVAAAKYDLNYIGLDGSIGC 296
Query: 307 LVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGG 366
+VNGAGLAMATMDIIK+HGG PANFLDVGG NE+ +++AF+I++SD VK ILVN+FGG
Sbjct: 297 MVNGAGLAMATMDIIKMHGGSPANFLDVGGSANEQQVVEAFKILTSDKQVKAILVNIFGG 356
Query: 367 IVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKL 411
I+ C IA+G+VNA K +S+PLVVRLEGTNV +GK I+ S +
Sbjct: 357 IMKCDVIARGIVNAAKQVGVSVPLVVRLEGTNVAQGKDIIRSSGM 401
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKL 507
A +VNA K +S+PLVVRLEGTNV +GK I+ S +
Sbjct: 364 ARGIVNAAKQVGVSVPLVVRLEGTNVAQGKDIIRSSGM 401
>gi|2351685|gb|AAB68609.1| adhesin protein AP51-1, partial [Trichomonas vaginalis]
Length = 403
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/401 (45%), Positives = 246/401 (61%), Gaps = 35/401 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLI 94
A + +N VIKAQ+ GGRG GH+ + GFKSGVHF + + I ++M+GH L+
Sbjct: 36 AAEAFRKMNLPAAVIKAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLV 95
Query: 95 TKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPH 154
TKQT K G+ VM++ V + RE YF I+ DR PVVI S GG +IE VAA P
Sbjct: 96 TKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPE 155
Query: 155 LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEF 214
+ +D +GITE +A++I+ L G K ++
Sbjct: 156 KIHKFVLDGVEGITEEVAKNISTKLGLTG-----------KAYD---------------- 188
Query: 215 RGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNI 274
E+QKLW LF+ DATQ+E+NPL ET + +I+VD+K NFDD+A +RQK I
Sbjct: 189 ------NGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQI 242
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
F ++ + +P E+ A KY LNYV +DGN+ CLVNGAGLAMATMD+IKL GG+PANFLD+
Sbjct: 243 FGYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDL 302
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GG +E ++ + F IIS S+VK ILVN+FGGIV C +A G++ A K L +PLVVRL
Sbjct: 303 GGAASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRL 362
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACKSFKL 434
EGTNV+ GK+++ ES LP+I A +L +A V A K K
Sbjct: 363 EGTNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKGEKF 403
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA ++ A K L +PLVVRLEGTNV+ GK+++ ES LP+I A +L +A
Sbjct: 342 AAGVIAAFKKVGLKVPLVVRLEGTNVEAGKKLIRESGLPIISADNLTDAG 391
>gi|330843612|ref|XP_003293744.1| succinate-CoA ligase (ADP-forming) [Dictyostelium purpureum]
gi|325075897|gb|EGC29733.1| succinate-CoA ligase (ADP-forming) [Dictyostelium purpureum]
Length = 436
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 182/388 (46%), Positives = 248/388 (63%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I + L ++ V+KAQILAGGRG G F +G K GVH ++ ++I ++MIGH L+T
Sbjct: 56 AEKIAEVLGTQDLVVKAQILAGGRGKGIFTSGLKGGVHLCSSPEEIKNYAKQMIGHTLVT 115
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V++V + + + +E YF I+ DR GPV++ SP GG DIE VA TP
Sbjct: 116 KQTGPDGKVVHQVYITERHFLRKEMYFAILMDRKAGGPVMVASPQGGVDIEAVARDTPSA 175
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID++ G+ +A+ L F +K E
Sbjct: 176 IFKEPIDINIGVKPEQTARLAEKLGF-----SKKNIE----------------------- 207
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
KA +++KL++ F+ D T +EINP ET EV+ +DAK+NFDDN+ FR K IF
Sbjct: 208 -----KAQDQMKKLYDFFIKNDCTLVEINPFAETASGEVLCMDAKLNFDDNSSFRHKEIF 262
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + S+ DPREV A++Y+LNY+G++GNIGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 263 ALRDKSQEDPREVKAAEYDLNYIGLEGNIGCLVNGAGLAMATMDIIKLYGGSPANFLDVG 322
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG ++ + +A ++ISSD NVK ILVN+FGGI+ C IA G++ A K + PLVVRL+
Sbjct: 323 GGATQKQVQEAIKLISSDPNVKSILVNIFGGIMKCDIIALGIIAAVKELSIKTPLVVRLQ 382
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ K+I++ES L +I A DLDEAA
Sbjct: 383 GTNVESAKKIMEESGLRIIAADDLDEAA 410
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K + PLVVRL+GTNV+ K+I++ES L +I A DLDEAA
Sbjct: 361 ALGIIAAVKELSIKTPLVVRLQGTNVESAKKIMEESGLRIIAADDLDEAA 410
>gi|291231475|ref|XP_002735690.1| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit-like
[Saccoglossus kowalevskii]
Length = 430
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 189/393 (48%), Positives = 252/393 (64%), Gaps = 33/393 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L ++ VIKAQ+LAGGRG G FDNGFK GV ++I KMIG+K
Sbjct: 46 AEDALRVSKKLGAEDLVIKAQVLAGGRGKGTFDNGFKGGVKIAFTPEEIQSFASKMIGNK 105
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT K G N+V + + + RETYF I DR H+GPV+I S GG +IE VA
Sbjct: 106 LITKQTGKNGRICNEVYICERLYSRRETYFAITMDRTHSGPVIIASSQGGVNIEEVARDH 165
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PIDV QG+++ A IA+ + F +T+ Q+
Sbjct: 166 PEAIVTHPIDVTQGLSKEDALMIAEKVGF--------STKSQE----------------- 200
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
AA KL+++F+S DAT +EINP+ E + +V +DAK NFDDNA FRQK
Sbjct: 201 --------HAADSFMKLYDVFISRDATMIEINPMTEDSQGKVYCMDAKFNFDDNAAFRQK 252
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + S+ D REV+ASK+NLNY+ +DG+IGCLVNGAGLAMATMDIIKLHGGEPANFL
Sbjct: 253 EVFSFRDWSQEDEREVEASKFNLNYIQLDGDIGCLVNGAGLAMATMDIIKLHGGEPANFL 312
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF +I+SD V I+VN+FGGI+ C IA+G++ A + L++PLV+
Sbjct: 313 DVGGGATAEQVKEAFHLITSDPKVAAIMVNIFGGIMRCDIIAQGIIAAAEELNLNVPLVI 372
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
RL+GT V + + ++ SKL ++ S+LDEAA +
Sbjct: 373 RLQGTQVDDARALIASSKLRILACSELDEAAKM 405
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 434 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 473
L++PLV+RL+GT V + + ++ SKL ++ S+LDEAA +
Sbjct: 366 LNVPLVIRLQGTQVDDARALIASSKLRILACSELDEAAKM 405
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 482 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
L++PLV+RL+GT V + + ++ SKL ++ S+LDEAA +
Sbjct: 366 LNVPLVIRLQGTQVDDARALIASSKLRILACSELDEAAKMAV 407
>gi|384245897|gb|EIE19389.1| succinate-CoA ligase beta chain [Coccomyxa subellipsoidea C-169]
Length = 421
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/363 (46%), Positives = 236/363 (65%), Gaps = 35/363 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ V+K+QILAGGRGLG F +G + GVH + V + P + E+M+G L+TKQT G VN
Sbjct: 72 QVVVKSQILAGGRGLGKFKSGLQGGVHICS-VDEAPKLAEQMLGQVLVTKQTGPAGKPVN 130
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
+ +A ++ E YF I+ DR GP++I GGT IE++A K P + I ID+ +G
Sbjct: 131 TLYIANKMSFANEMYFAILLDRASAGPMIIACSEGGTSIEDLAEKYPEKIIKITIDIFEG 190
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
IT++ A + L+ GD KA AA ++
Sbjct: 191 ITDAQANQAVEALKVSGDKKA----------------------------------AADQI 216
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+ L+ F+ D T +E+NPL ET + +++ DAK+ FDDNA FRQK +F++ + S+ DPR
Sbjct: 217 KALYETFVKSDCTMVEVNPLAETTDGRLVAADAKLGFDDNAAFRQKELFAKRDSSQEDPR 276
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A K++LNY+G+DGNIGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E+ +++A
Sbjct: 277 EVAAGKFDLNYIGLDGNIGCMVNGAGLAMATMDIIKLHGGSPANFLDVGGNASEQQVVEA 336
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F+I++SD VK I+VN+FGGI+ C IA G+VNA K +S+PL+VRLEGTNV++GK IL
Sbjct: 337 FKILTSDPQVKAIMVNIFGGIMKCDVIAAGIVNAAKGVGVSVPLIVRLEGTNVEKGKEIL 396
Query: 407 DES 409
S
Sbjct: 397 SNS 399
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDES 505
AA +VNA K +S+PL+VRLEGTNV++GK IL S
Sbjct: 364 AAGIVNAAKGVGVSVPLIVRLEGTNVEKGKEILSNS 399
>gi|32469357|gb|AAP83351.1| succinyl-CoA synthetase, beta subunit [Neocallimastix patriciarum]
Length = 436
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 180/386 (46%), Positives = 237/386 (61%), Gaps = 33/386 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN ++ VIKAQ+LAGGRG GHFD+G + GV + + KM+GHKLITKQT
Sbjct: 63 KKLNTEDLVIKAQVLAGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGA 122
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G + N V V + RE YF I+ DR GPV++ S GG +IE VA P + T+P
Sbjct: 123 AGRDCNAVYVVERQYARREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAIITVP 182
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+ G+T+ +A D A + F +AA + FL
Sbjct: 183 FSIKTGLTKEIALDTAKKMGFTEKCVPQAA-------DTFL------------------- 216
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
KL+ +F+ DAT +EINP+ E + EV+ +DAK FDDNA ++QK IF+ +
Sbjct: 217 -------KLYKIFIEKDATMVEINPMAENNRGEVVCMDAKFGFDDNASYKQKGIFALRDT 269
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ DPREV A+K+NLNYVGM+GNIGCLVNGAGLAMATMDIIKL+GG PANFLDVGG
Sbjct: 270 TQEDPREVAAAKWNLNYVGMEGNIGCLVNGAGLAMATMDIIKLNGGVPANFLDVGGSATA 329
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
+ + +AF+IISSD V ILVN+FGGI+ C +A+G++ A K L IPLVVRL+GT V+
Sbjct: 330 KQVKEAFKIISSDKAVSAILVNIFGGIMRCDIVAEGVIQAVKELGLDIPLVVRLQGTKVE 389
Query: 401 EGKRILDESKLPLIFASDLDEAASLV 426
E + ++ S L L DLD+AA V
Sbjct: 390 EARELIRNSNLSLYAIDDLDKAAKKV 415
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L IPLVVRL+GT V+E + ++ S L L DLD+AA +
Sbjct: 363 AEGVIQAVKELGLDIPLVVRLQGTKVEEARELIRNSNLSLYAIDDLDKAAKKVV 416
>gi|210075643|ref|XP_502415.2| YALI0D04741p [Yarrowia lipolytica]
gi|199425760|emb|CAG80603.2| YALI0D04741p [Yarrowia lipolytica CLIB122]
Length = 435
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 247/393 (62%), Gaps = 33/393 (8%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
+ A +I K L ++ VIKAQ L GGRG GHFDNG K GV ++ + E+M+ HK+
Sbjct: 53 QQAEDIAKKLGCEDMVIKAQALTGGRGKGHFDNGLKGGVKLISSPTEAKMYAEQMLNHKI 112
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
TKQT G V V V + + RE Y I+ DR P+++ S GG DIE VAA+ P
Sbjct: 113 FTKQTGPQGKPVTAVYVVEREFVRREAYVAILMDRATQKPIIVASSQGGMDIEGVAAENP 172
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ T P+D+H G+T++ A ++A L F +KA E
Sbjct: 173 DAIHTFPVDIHTGVTDTQAIEVAKALGF----SSKATQE--------------------- 207
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
AA +++KL+ +F DATQ+EINPL ET + V+++DAK+ FDDNA FRQ+
Sbjct: 208 --------AADDIKKLYKVFTDKDATQIEINPLSETTDHRVVAMDAKLGFDDNASFRQEE 259
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
++S ++++ DP E++A+K+ LN++ +DGNIGCLVNGAGLAMATMDIIKL+GGEPANFLD
Sbjct: 260 VWSWRDLTQEDPEEIEAAKHGLNFIKLDGNIGCLVNGAGLAMATMDIIKLYGGEPANFLD 319
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
GGG ++I +AF +I+S+ V I VN+FGGIV C IAKGL+ ++ L+IP+V R
Sbjct: 320 CGGGATADAIKKAFELITSEPGVTAIFVNIFGGIVRCDNIAKGLIAVAQNMNLNIPIVAR 379
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
L+GTN+ E ++++ +S L + DLDEAA V
Sbjct: 380 LQGTNLAEAQKLISDSGLKIFSFGDLDEAAQKV 412
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A L+ ++ L+IP+V RL+GTN+ E ++++ +S L + DLDEAA
Sbjct: 360 AKGLIAVAQNMNLNIPIVARLQGTNLAEAQKLISDSGLKIFSFGDLDEAAQ 410
>gi|348670933|gb|EGZ10754.1| hypothetical protein PHYSODRAFT_352366 [Phytophthora sojae]
Length = 467
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 182/387 (47%), Positives = 247/387 (63%), Gaps = 33/387 (8%)
Query: 37 TNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITK 96
+ I D + VIKAQ L GGRGLG F NGFK GVH + +KM+G L+TK
Sbjct: 90 SKIRGDREGVDVVIKAQALTGGRGLGTFKNGFKGGVHMCTKPEQAEDFAKKMLGETLVTK 149
Query: 97 QTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLV 156
QT + GI V KV + + V + RE YF I+ DR GPV++ SP+GGT IE+VA TP L+
Sbjct: 150 QTGEKGIEVAKVFLMERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELI 209
Query: 157 KTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRG 216
+D+ G T++ +A L +G++ ++KL
Sbjct: 210 FKENVDISTGPTDAQVSRLAKALGGEGEV-------LRKL-------------------- 242
Query: 217 DLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFS 276
T+++ L+N+F+ VDAT +EINPL ET E E+ + DAK+N+DDNA FR K IF+
Sbjct: 243 ------ETQIKNLYNMFIGVDATLVEINPLAETREGEIFACDAKLNYDDNAAFRHKEIFA 296
Query: 277 QNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGG 336
+ + ++ DPREV+AS Y+LNY+G+DGNIGCLVNGAGLAMATMDII L+GG PANFLDVGG
Sbjct: 297 KRDKTQEDPREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLYGGSPANFLDVGG 356
Query: 337 GVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEG 396
G EE + +AF I+ D VK ILVN+FGGI+ C IA G+V A K L P+++RL+G
Sbjct: 357 GATEEQVKKAFEILDGDDQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPVIIRLQG 416
Query: 397 TNVQEGKRILDESKLPLIFASDLDEAA 423
TNV+ ++I+ ES + +I A DL++AA
Sbjct: 417 TNVEPARKIIAESGIKMIVADDLEDAA 443
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 430 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 471
K L P+++RL+GTNV+ ++I+ ES + +I A DL++AA
Sbjct: 402 KDLGLKKPVIIRLQGTNVEPARKIIAESGIKMIVADDLEDAA 443
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
K L P+++RL+GTNV+ ++I+ ES + +I A DL++AA
Sbjct: 402 KDLGLKKPVIIRLQGTNVEPARKIIAESGIKMIVADDLEDAA 443
>gi|401411083|ref|XP_003884989.1| cDNA FLJ54097, highly similar to Succinyl-CoA ligase (ADP-forming)
beta-chain, mitochondrial, related [Neospora caninum
Liverpool]
gi|325119408|emb|CBZ54961.1| cDNA FLJ54097, highly similar to Succinyl-CoA ligase (ADP-forming)
beta-chain, mitochondrial, related [Neospora caninum
Liverpool]
Length = 495
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 184/422 (43%), Positives = 256/422 (60%), Gaps = 43/422 (10%)
Query: 14 YLVKPVSTVHSTDKVCLEDART--ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKS 70
++ P V ST K ++A T + D ++V+KAQ+LAGGRGLG F +NG++
Sbjct: 84 HITTPKFAVASTAKEAEQEAATFLSETQSGDGEPVDFVVKAQVLAGGRGLGFFRENGYQG 143
Query: 71 GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLH 130
GV + +++ + +KM+G L+TKQT K G NKV+V + I +E Y I+ DR
Sbjct: 144 GVQVCESPREVGIVADKMLGKTLVTKQTGKEGKTCNKVLVTERFFIRKEKYVAILMDRSA 203
Query: 131 NGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAA 190
GP++I S GGT IE++A P + +PID++QGI+E ++ A+ L F GD + +AA
Sbjct: 204 GGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISEPRLREFAELLGFSGD-RLEAA 262
Query: 191 TEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETD 250
+ ++ L+ LF S D TQ+E+NPLVET
Sbjct: 263 CQC--------------------------------IRGLYELFTSKDCTQIEVNPLVETH 290
Query: 251 EREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNG 310
+ V+ DAK+NFDDNA FRQK++F+Q + S+ DPREV A +LNY+G+DG+IGC+VNG
Sbjct: 291 DGRVLVCDAKLNFDDNAAFRQKDVFAQRDYSQEDPREVAADAADLNYIGLDGSIGCMVNG 350
Query: 311 AGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNC 370
AGLAMATMDII LHGG PANFLDVGGG ++ II+A +II D C+LVN+FGGI+ C
Sbjct: 351 AGLAMATMDIIHLHGGSPANFLDVGGGADQLQIIEALKIIQQDKRANCVLVNIFGGIMRC 410
Query: 371 ATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFAS-------DLDEAA 423
IAKGLV A + P+V+RLEGTN + K +L E + +AS D D+AA
Sbjct: 411 DVIAKGLVAAAREVGFDKPVVLRLEGTNKEAAKEVLREVRTDPAYASLQLLQEDDFDKAA 470
Query: 424 SL 425
L
Sbjct: 471 QL 472
>gi|398405782|ref|XP_003854357.1| succinate--CoA ligase (GDP-forming) subunit beta [Zymoseptoria
tritici IPO323]
gi|339474240|gb|EGP89333.1| beta subunit of succinyl-CoA ligase [Zymoseptoria tritici IPO323]
Length = 440
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 180/393 (45%), Positives = 246/393 (62%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+A+ A I + ++ VIKAQ+LAGGRG GHFDNGFK GV + ++ + E+MIG
Sbjct: 55 HNAKEAHEIASKIGGEDMVIKAQVLAGGRGKGHFDNGFKGGVRVVYSPREASILAEQMIG 114
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
HKLITKQT + G N V + + RE Y I+ DR PV++ S GG DIE VA
Sbjct: 115 HKLITKQTGERGRICNSVFIVERKFARREFYLAILMDRGSQTPVIVASSQGGMDIETVAK 174
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + T ID+H+G+T+++A+ I+ L F +++ D
Sbjct: 175 ETPDAIITTKIDIHEGVTDAIARKISTQLGF-----------------------SEQCVD 211
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
A +QKL+ +F+ DATQ+EINPL ET + +V+ +DAK +FDDNAEFR
Sbjct: 212 ----------DATKTIQKLYKIFMEKDATQIEINPLSETSDHQVLCMDAKFSFDDNAEFR 261
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF+ + S+ D EV A + LN++ +DG+IGCLVNGAGLAMATMDIIKL+GGEPAN
Sbjct: 262 QKEIFNWRDTSQEDADEVAAGESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGEPAN 321
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E+I QAF +I+SD V I VN+FGGIV C IAKGL++ +S L P+
Sbjct: 322 FLDVGGGATPEAIKQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLISVVESMNLRTPV 381
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+ RL+GTN ++ ++++ES L + DL AA
Sbjct: 382 IARLQGTNGEQAHKLINESGLKIFSIDDLQTAA 414
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ +S L P++ RL+GTN ++ ++++ES L + DL AA
Sbjct: 365 AKGLISVVESMNLRTPVIARLQGTNGEQAHKLINESGLKIFSIDDLQTAA 414
>gi|242794316|ref|XP_002482345.1| succinyl-CoA synthetase beta subunit, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718933|gb|EED18353.1| succinyl-CoA synthetase beta subunit, putative [Talaromyces
stipitatus ATCC 10500]
Length = 444
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 180/394 (45%), Positives = 242/394 (61%), Gaps = 36/394 (9%)
Query: 33 ARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ARTA + K ++ + VIKAQ+LAGGRG G FDNG K GV + + E+MI
Sbjct: 58 ARTAEEAEAVAKQIDGDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMI 117
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GHKLITKQT G N V + + RE Y I+ DR PV++ S GG DIE VA
Sbjct: 118 GHKLITKQTGARGRLCNAVYIVERKFARREFYLAILMDRQTQSPVIVSSSQGGMDIETVA 177
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP ++T PID+ G+T+ +A+ IA L F AQ I
Sbjct: 178 KETPEAIRTTPIDIKTGVTDDIARSIATDLGFS----------------------AQCIE 215
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
D A +Q L+ +FL DATQ+EINPL ET + +V+++DAK+ FDDNAEF
Sbjct: 216 D-----------AKNTIQNLYKVFLEKDATQIEINPLTETSDHQVLAMDAKLGFDDNAEF 264
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK +FS + ++ DP EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PA
Sbjct: 265 RQKEVFSWRDTTQEDPDEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPA 324
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P
Sbjct: 325 NFLDVGGGATPAAIKSAFELITSDPKVTSIFVNIFGGIVRCDAIAQGLINVVRDMGLRTP 384
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
++ RL+GTN+++ ++++D+S L + DL AA
Sbjct: 385 VIARLQGTNMEQARKLIDDSNLKIFCIEDLQSAA 418
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P++ RL+GTN+++ ++++D+S L + DL AA
Sbjct: 369 AQGLINVVRDMGLRTPVIARLQGTNMEQARKLIDDSNLKIFCIEDLQSAA 418
>gi|397620382|gb|EJK65694.1| hypothetical protein THAOC_13425 [Thalassiosira oceanica]
Length = 425
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/378 (46%), Positives = 239/378 (63%), Gaps = 35/378 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
E VIK+QILAGGRGLG F NG + GVH ++ +M+G L+TKQ+ G VN
Sbjct: 76 EVVIKSQILAGGRGLGTFTNGLQGGVHIIKT-SEVGEYAGRMLGGTLVTKQSGPAGKPVN 134
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
+++AK +++ +E YF I DR GP++I GGT IE++A +P + +PIDV G
Sbjct: 135 TLLLAKKMSLAKEFYFAIFMDRSSGGPLIIACSEGGTSIEDLAESSPEKIVKVPIDVRTG 194
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
T+ + D L G + AA ++
Sbjct: 195 PTDEQIATVVDGLGVSGS----------------------------------RDDAAGQI 220
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+ L+NLF+ D T +E+NPL E + ++I+ DAKI FDDNAEFR ++IF Q + ++ DPR
Sbjct: 221 RALYNLFVDKDCTMVEVNPLAEDTDGKLIAADAKIGFDDNAEFRHRDIFEQRDHTQEDPR 280
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A K++LNY+G+DGNIGC+VNGAGLAM+TMDII L GG PANFLDVGG N + I A
Sbjct: 281 EVAAGKWDLNYIGLDGNIGCMVNGAGLAMSTMDIISLRGGSPANFLDVGGSANVDQIKAA 340
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F II++D VK ILVN+FGGI+ C IA+G++ A +S L +P++VRLEGTNV+ GK++L
Sbjct: 341 FEIITTDPAVKAILVNIFGGIMKCDIIAEGIIEASRSLDLKVPVIVRLEGTNVERGKKLL 400
Query: 407 DESKLPLIFASDLDEAAS 424
+ES L LI A DLD+AA+
Sbjct: 401 EESGLALITADDLDDAAT 418
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A +S L +P++VRLEGTNV+ GK++L+ES L LI A DLD+AA
Sbjct: 368 AEGIIEASRSLDLKVPVIVRLEGTNVERGKKLLEESGLALITADDLDDAAT 418
>gi|159466790|ref|XP_001691581.1| succinate-coa ligase beta chain [Chlamydomonas reinhardtii]
gi|158278927|gb|EDP04689.1| succinate-coa ligase beta chain [Chlamydomonas reinhardtii]
Length = 421
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 184/394 (46%), Positives = 249/394 (63%), Gaps = 36/394 (9%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++ + A + + D E VIK+QILAGGRGLG F NG + GVH + + + ++M+
Sbjct: 56 LDEVKKAVDQMAD-EKGEVVIKSQILAGGRGLGKFTNGLQGGVHIVPKAKALE-LAKQML 113
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+TKQT G VN ++++K + + RE YF I+ DR GP++I GGT IE++A
Sbjct: 114 GATLVTKQTGPAGKPVNTLLISKKMKLKREMYFAILLDRKTAGPMMIGCSEGGTSIEDLA 173
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
K P + IPID+ GIT++ A + + L GD
Sbjct: 174 EKFPEKIIKIPIDIRVGITDAQAMQMVEGLRVTGD------------------------- 208
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
KA AA +++ L+ LF D T +E+NPL E + +I+ DAK+ FDDNA +
Sbjct: 209 ---------KAAAAKQIKALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAY 259
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK IF + S+ DPREV ASKY+LNY+G+DG+IGC+VNGAGLAMATMDIIK+HGG PA
Sbjct: 260 RQKPIFDMKDESQIDPREVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPA 319
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGG NE+ +++AF+I++ D VK ILVN+FGGI+ C IA G+VNA K + +P
Sbjct: 320 NFLDVGGSANEQQVVEAFKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVP 379
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LVVRLEGTNV GK IL S + +I A DLD+AA
Sbjct: 380 LVVRLEGTNVARGKEILATSGMTIITADDLDDAA 413
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A+ +VNA K + +PLVVRLEGTNV GK IL S + +I A DLD+AA
Sbjct: 364 ASGIVNAAKQVGVQVPLVVRLEGTNVARGKEILATSGMTIITADDLDDAAK 414
>gi|159466792|ref|XP_001691582.1| succinate-coa ligase beta chain, minor isoform [Chlamydomonas
reinhardtii]
gi|158278928|gb|EDP04690.1| succinate-coa ligase beta chain, minor isoform [Chlamydomonas
reinhardtii]
Length = 382
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 184/394 (46%), Positives = 249/394 (63%), Gaps = 36/394 (9%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L++ + A + + D E VIK+QILAGGRGLG F NG + GVH + + + ++M+
Sbjct: 17 LDEVKKAVDQMAD-EKGEVVIKSQILAGGRGLGKFTNGLQGGVHIVPKAKALE-LAKQML 74
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+TKQT G VN ++++K + + RE YF I+ DR GP++I GGT IE++A
Sbjct: 75 GATLVTKQTGPAGKPVNTLLISKKMKLKREMYFAILLDRKTAGPMMIGCSEGGTSIEDLA 134
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
K P + IPID+ GIT++ A + + L GD
Sbjct: 135 EKFPEKIIKIPIDIRVGITDAQAMQMVEGLRVTGD------------------------- 169
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
KA AA +++ L+ LF D T +E+NPL E + +I+ DAK+ FDDNA +
Sbjct: 170 ---------KAAAAKQIKALYTLFDKSDCTMVEVNPLAEGLDGSLIAADAKLGFDDNAAY 220
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK IF + S+ DPREV ASKY+LNY+G+DG+IGC+VNGAGLAMATMDIIK+HGG PA
Sbjct: 221 RQKPIFDMKDESQIDPREVAASKYDLNYIGLDGSIGCMVNGAGLAMATMDIIKMHGGAPA 280
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGG NE+ +++AF+I++ D VK ILVN+FGGI+ C IA G+VNA K + +P
Sbjct: 281 NFLDVGGSANEQQVVEAFKILTGDKQVKAILVNIFGGIMKCDVIASGIVNAAKQVGVQVP 340
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LVVRLEGTNV GK IL S + +I A DLD+AA
Sbjct: 341 LVVRLEGTNVARGKEILATSGMTIITADDLDDAA 374
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +VNA K + +PLVVRLEGTNV GK IL S + +I A DLD+AA
Sbjct: 325 ASGIVNAAKQVGVQVPLVVRLEGTNVARGKEILATSGMTIITADDLDDAA 374
>gi|302807299|ref|XP_002985362.1| hypothetical protein SELMODRAFT_122224 [Selaginella moellendorffii]
gi|300146825|gb|EFJ13492.1| hypothetical protein SELMODRAFT_122224 [Selaginella moellendorffii]
Length = 432
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 180/369 (48%), Positives = 238/369 (64%), Gaps = 34/369 (9%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+E V+K+QILAGGRGLG F NG K GVH + I KM+G L+TKQT G V
Sbjct: 81 EELVVKSQILAGGRGLGTFKNGLKGGVHIVKR-DKVEEIAGKMLGQILVTKQTGPEGKPV 139
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
NKV + + + + E YF I DR GPV+I GGT IE++A K P ++ +PI++H+
Sbjct: 140 NKVFICEKLQLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPINIHK 199
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GIT++ A+ + + L K AD K + +
Sbjct: 200 GITDADAEKVVNGLNL-------------------------KCAD--------KNDSMQQ 226
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
V+ L++LF D T +EINPL ET + ++++ DAK+NFDDNA FRQ+ IF+ + S+ D
Sbjct: 227 VKHLYDLFCKSDCTLVEINPLAETADGKLVAADAKLNFDDNASFRQQEIFALRDQSQEDA 286
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV A+ +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +I+
Sbjct: 287 REVAAAAADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGSPANFLDVGGNASENQVIE 346
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++SD VK ILVN+FGGI+ C IA G+VNA K+ L +PL+VRLEGTNV GKRI
Sbjct: 347 AFKILTSDKKVKAILVNIFGGIMKCNVIASGIVNAAKTVSLKVPLIVRLEGTNVDLGKRI 406
Query: 406 LDESKLPLI 414
L ESK+ LI
Sbjct: 407 LKESKMNLI 415
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A+ +VNA K+ L +PL+VRLEGTNV GKRIL ESK+ LI
Sbjct: 375 ASGIVNAAKTVSLKVPLIVRLEGTNVDLGKRILKESKMNLI 415
>gi|302795781|ref|XP_002979653.1| hypothetical protein SELMODRAFT_419323 [Selaginella moellendorffii]
gi|300152413|gb|EFJ19055.1| hypothetical protein SELMODRAFT_419323 [Selaginella moellendorffii]
Length = 432
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 182/371 (49%), Positives = 241/371 (64%), Gaps = 38/371 (10%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFT--NNVQDIPPILEKMIGHKLITKQTPKTGI 103
+E V+K+QILAGGRGLG F NG K GVH + V+DI KM+G L+TKQT G
Sbjct: 81 EELVVKSQILAGGRGLGTFKNGLKGGVHIVKRDKVEDIAG---KMLGQILVTKQTGPEGK 137
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
VNKV + + + + E YF I DR GPV+I GGT IE++A K P ++ +PI++
Sbjct: 138 PVNKVFICEKLQLVNEMYFAIALDRASAGPVIIACSKGGTSIEDLAEKYPDMIIKVPINI 197
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
H+GIT++ A+ + + L K AD K +
Sbjct: 198 HKGITDADAEKVVNGLNL-------------------------KCAD--------KNDSM 224
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
+V+ L++LF D T +EINPL ET + ++++ DAK+NFDDNA FRQ+ IF+ + S+
Sbjct: 225 QQVKHLYDLFCKSDCTLVEINPLAETADGKLVAADAKLNFDDNASFRQQEIFALRDQSQE 284
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
D REV A+ +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +
Sbjct: 285 DAREVAAAAADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGSPANFLDVGGNASENQV 344
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
I+AF+I++SD VK ILVN+FGGI+ C IA G+VNA K+ L +PL+VRLEGTNV GK
Sbjct: 345 IEAFKILTSDKKVKAILVNIFGGIMKCNVIASGIVNAAKTVSLKVPLIVRLEGTNVDLGK 404
Query: 404 RILDESKLPLI 414
RIL ESK+ LI
Sbjct: 405 RILKESKMNLI 415
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A+ +VNA K+ L +PL+VRLEGTNV GKRIL ESK+ LI
Sbjct: 375 ASGIVNAAKTVSLKVPLIVRLEGTNVDLGKRILKESKMNLI 415
>gi|123412039|ref|XP_001303981.1| adhesin protein AP51-2 [Trichomonas vaginalis G3]
gi|121885402|gb|EAX91051.1| adhesin protein AP51-2, putative [Trichomonas vaginalis G3]
Length = 409
Score = 347 bits (890), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 184/395 (46%), Positives = 242/395 (61%), Gaps = 37/395 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKM 88
ART A K + VIKAQ+ GGRG GH+ + GFKSGVHF + + I ++M
Sbjct: 35 ARTPEEAAAAFKKMGLPAAVIKAQVYCGGRGKGHWKETGFKSGVHFVKSADEAAKIAKEM 94
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+GH L+TKQT G+ VM++ V + RE YF I+ DR PVVI S GG +IE V
Sbjct: 95 LGHHLVTKQTGADGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEV 154
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
AAK P + +D +GIT +A +I+ L G A E
Sbjct: 155 AAKHPEKILKFQLDGVEGITRDVAVNISKQLGLTGK-----AYE---------------- 193
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
E+QKLW LF+ DATQ+E+NPL ET + +I+VD+K NFDD+A
Sbjct: 194 ------------NGIEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAH 241
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+RQK IF ++ + +P E+ A KY LNYV +DGN+ CLVNGAGLAMATMD+IKL GG+P
Sbjct: 242 YRQKQIFGYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDP 301
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLD+GGG +E ++ + F IISS S+VK ILVN+FGGIV C +A G++ A K L +
Sbjct: 302 ANFLDLGGGASEAAVTEGFTIISSQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKV 361
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV GK+++ ES LP+I A +L +A
Sbjct: 362 PLVVRLEGTNVDAGKKLIRESGLPIIPADNLTDAG 396
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA ++ A K L +PLVVRLEGTNV GK+++ ES LP+I A +L +A
Sbjct: 347 AAGVIAAFKKVGLKVPLVVRLEGTNVDAGKKLIRESGLPIIPADNLTDAG 396
>gi|255721911|ref|XP_002545890.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
tropicalis MYA-3404]
gi|240136379|gb|EER35932.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
tropicalis MYA-3404]
Length = 416
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/383 (46%), Positives = 237/383 (61%), Gaps = 33/383 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K L E VIKAQ L GGRG GHFD+G + GV ++ ++ + +M+ HKLITKQT
Sbjct: 55 KKLGTNELVIKAQALTGGRGKGHFDSGLQGGVKLISSAEEAKDLAGQMLNHKLITKQTGA 114
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V V + + + E Y I+ DR P+++ S GG DIE VAAK P +KT P
Sbjct: 115 AGKEVTAVYIVERRDAATEAYVAILMDRAKQTPIIVASAQGGMDIEGVAAKDPSAIKTFP 174
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+ + +G+++SLA +IA L F D
Sbjct: 175 VPLEEGVSDSLATEIAGV---------------------------------LGFTQDAIP 201
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+AA +Q L+N F+ D TQ+EINPL ET + +V+++DAK+ FDDNA FRQ+ +FS +
Sbjct: 202 EAAKTIQSLYNCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVFSWRDP 261
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ DP+EV+ASKY LN++ +DGNI +VNGAGLAMATMDIIKL+GGEPANFLD GG
Sbjct: 262 TQEDPQEVEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCGGTATP 321
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E+I +AF +I SDS V I VN+FGGIV C +AKGL+ A K+F L IP+VVRL+GTN+
Sbjct: 322 ETIEKAFELILSDSKVNGIFVNIFGGIVRCDYVAKGLIAATKNFNLDIPVVVRLQGTNMA 381
Query: 401 EGKRILDESKLPLIFASDLDEAA 423
E K ++D S L L DLD AA
Sbjct: 382 EAKELIDNSGLKLYAFEDLDPAA 404
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F L IP+VVRL+GTN+ E K ++D S L L DLD AA +
Sbjct: 355 AKGLIAATKNFNLDIPVVVRLQGTNMAEAKELIDNSGLKLYAFEDLDPAAEKIV 408
>gi|237829849|ref|XP_002364222.1| succinyl-CoA ligase, putative [Toxoplasma gondii ME49]
gi|92399541|gb|ABE76512.1| mitochondrial putative ATP-specific succinyl-CoA synthetase beta
subunit [Toxoplasma gondii]
gi|211961886|gb|EEA97081.1| succinyl-CoA ligase, putative [Toxoplasma gondii ME49]
gi|221487295|gb|EEE25527.1| succinyl-CoA ligase, putative [Toxoplasma gondii GT1]
gi|221507087|gb|EEE32691.1| succinyl-CoA ligase, putative [Toxoplasma gondii VEG]
Length = 498
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/422 (44%), Positives = 255/422 (60%), Gaps = 43/422 (10%)
Query: 14 YLVKPVSTVHSTDKVCLEDART--ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKS 70
++ P V ST K ++A T + + D ++V+KAQ+LAGGRGLG F +NG++
Sbjct: 87 HITTPKFAVASTAKEAEQEAATFLSESPSGDGEPVDFVVKAQVLAGGRGLGFFRENGYQG 146
Query: 71 GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLH 130
GV + +++ + EKM+G L+TKQT K G NKV+V + I +E Y I+ DR
Sbjct: 147 GVQVCESPREVGIVAEKMLGKTLVTKQTGKEGKLCNKVLVTERFFIRKEKYVAILMDRGA 206
Query: 131 NGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAA 190
GP++I S GGT IE++A P + +PID++QGI+E ++ A+ L F G
Sbjct: 207 GGPILIGSARGGTSIEDIAHNYPESIHKMPIDINQGISEPRLREFAELLGFSG------- 259
Query: 191 TEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETD 250
D LE A ++ L+ LF S D TQ+E+NPLVET
Sbjct: 260 -------------------DRLE-------AACQCIRGLYELFRSKDCTQIEVNPLVETH 293
Query: 251 EREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNG 310
+ V+ DAK+NFDDNA FRQK+IFSQ + S+ DPREV A +LNY+G++G+IGC+VNG
Sbjct: 294 DGRVLVCDAKLNFDDNAGFRQKDIFSQRDYSQEDPREVAADAADLNYIGLEGSIGCMVNG 353
Query: 311 AGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNC 370
AGLAMATMDII LHGG PANFLDVGGG ++ II+A +II D C+LVN+FGGI+ C
Sbjct: 354 AGLAMATMDIIHLHGGSPANFLDVGGGADQHQIIEALKIIQQDKRANCVLVNIFGGIMRC 413
Query: 371 ATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE-------SKLPLIFASDLDEAA 423
IAKGLV A K P+V+RLEGTN + K +L + S L L+ D D+AA
Sbjct: 414 DVIAKGLVAAAKEVGFDKPVVLRLEGTNKEAAKEVLKDVLTDPAYSALQLLQEDDFDKAA 473
Query: 424 SL 425
L
Sbjct: 474 QL 475
>gi|393247966|gb|EJD55473.1| succinate-CoA ligase [Auricularia delicata TFB-10046 SS5]
Length = 422
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/389 (46%), Positives = 237/389 (60%), Gaps = 32/389 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K+ E VIKAQ+LAGGRG GHFDNGFK GVH KM+G LIT
Sbjct: 54 AYEVAKNWGSDEMVIKAQVLAGGRGKGHFDNGFKGGVHLIKGADQAKDYATKMLGANLIT 113
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VM A+ + E Y ++ DR PV++ S GG +IE VA + P
Sbjct: 114 KQTGAAGRLCNAVMFAEKRDAAHEYYAAVLNDRARQTPVLVTSAKGGMNIEEVAHEDPSA 173
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID G++ + A ++A L F D AT
Sbjct: 174 IITTPIDFANGLSHAQALELATTLGFSTD-----AT------------------------ 204
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ KAA +KL+ +F DATQ+EINPL ET + +V+ +DAK FDDNAEFRQ+++F
Sbjct: 205 ---REKAAAIFEKLYTIFKEKDATQIEINPLTETQDGDVLCMDAKFGFDDNAEFRQRDVF 261
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ +VS+ DP EV+A KY LN++ +DGNIGCLVNGAGLAMATMD++KLHGG+PANFLDVG
Sbjct: 262 ALRDVSQEDPVEVEAQKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLHGGDPANFLDVG 321
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E++ +AF ++ SD V IL+NVFGGI+ C IA+G++ A K +L +PLVVRL+
Sbjct: 322 GGATPETVKKAFELLLSDKKVTAILLNVFGGIMRCDYIAEGVIKATKELQLRVPLVVRLQ 381
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAAS 424
GT E K ++ ES L + LDEAA+
Sbjct: 382 GTKEPEAKALIKESGLKIYAFEGLDEAAA 410
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K +L +PLVVRL+GT E K ++ ES L + LDEAA
Sbjct: 360 AEGVIKATKELQLRVPLVVRLQGTKEPEAKALIKESGLKIYAFEGLDEAA 409
>gi|384485410|gb|EIE77590.1| hypothetical protein RO3G_02294 [Rhizopus delemar RA 99-880]
Length = 438
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/388 (46%), Positives = 244/388 (62%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A +I K L + VIKAQ+LAGGRG G FDNG+K GV N ++ + EKM+GHKL+T
Sbjct: 61 AFDIAKKLGSDDLVIKAQVLAGGRGKGTFDNGYKGGVKTFNTPEEARELAEKMLGHKLVT 120
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + E YF I+ DR GPV++ S GG DIE VAA+ P
Sbjct: 121 KQTGADGKPCNAVYICERKYARNEYYFAILLDRKSAGPVIVASSQGGVDIETVAAQNPEA 180
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T+P+D G+T+ +G L+ LAQK+ F
Sbjct: 181 IITMPVDNKVGLTK------------EGALE-----------------LAQKMG----FT 207
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ +AA L+ LF DATQ+EINPL E+ + +V+ +DAK+NFDDNA+FRQK++F
Sbjct: 208 PKGQEQAADTFINLYKLFNEKDATQVEINPLSESSDNQVLCMDAKLNFDDNADFRQKDVF 267
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D RE+ A+K++LNY+G+DG+IGCLVNGAGLAMATMDII+LHGG+PANFLDVG
Sbjct: 268 ELRDFTQEDSREIAAAKHHLNYIGLDGSIGCLVNGAGLAMATMDIIQLHGGKPANFLDVG 327
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G E++ AF II+SD NV VN+FGGI+ C IA+G++ A K L+IPL+VRL
Sbjct: 328 GAATPEAVKAAFEIITSDPNVTSAFVNIFGGIMRCDVIAEGIIAAAKDLDLNIPLIVRLR 387
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT V E K+++ ES L + DLD AA
Sbjct: 388 GTKVDEAKKLIAESGLRIFAVEDLDTAA 415
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L+IPL+VRL GT V E K+++ ES L + DLD AA
Sbjct: 366 AEGIIAAAKDLDLNIPLIVRLRGTKVDEAKKLIAESGLRIFAVEDLDTAA 415
>gi|395334093|gb|EJF66469.1| succinate-CoA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 416
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/390 (46%), Positives = 244/390 (62%), Gaps = 34/390 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K L+ VIKAQ+LAGGRG GHFDNG K GVH + + KMIG KLITKQT
Sbjct: 58 KQLSSTGSVIKAQVLAGGRGKGHFDNGLKGGVHVIETPEQAKALASKMIGAKLITKQTGA 117
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G N VM+A+ + + E Y ++ DR GPV++ S GG +IE VAAK P+ + T P
Sbjct: 118 AGRICNAVMLAERRDPSHEYYIAVLNDRNVGGPVLVASAQGGMNIEEVAAKDPNAIITTP 177
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID G+++S A D+A L F+ + A ++ F+
Sbjct: 178 IDFENGLSKSEALDLAKKLGFKTEGAQNEAADI-----------------FI-------- 212
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+L+ +F DATQ+EINPL ET + V+ +DAK FDDNA+FRQK++F+ ++
Sbjct: 213 -------RLYKIFKEKDATQIEINPLGETADGHVLCMDAKFGFDDNADFRQKDVFALRDI 265
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
S+ +P EV+A KYNLN++ +DG++GCLVNGAGLAMATMD++ LHGG PANFLDVGGG
Sbjct: 266 SQEEPSEVEAQKYNLNFIKLDGSVGCLVNGAGLAMATMDVLALHGGNPANFLDVGGGATP 325
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E++ +AF II +D VK I +N+FGGI+ C IA+G++NA K L +PL+VRL+GT
Sbjct: 326 ETVKKAFEIIVADPKVKSIFINIFGGIMRCDYIAEGVINAAKELSLKVPLIVRLKGTKEA 385
Query: 401 EGKRILDESKLPLIFASDLDEAASLVNACK 430
E K ++ +S L +I DLDEAA NA K
Sbjct: 386 EAKEMISQSGLKIIPFDDLDEAAH--NAVK 413
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++NA K L +PL+VRL+GT E K ++ +S L +I DLDEAA+
Sbjct: 359 AEGVINAAKELSLKVPLIVRLKGTKEAEAKEMISQSGLKIIPFDDLDEAAH 409
>gi|301107704|ref|XP_002902934.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Phytophthora infestans T30-4]
gi|262098052|gb|EEY56104.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Phytophthora infestans T30-4]
Length = 507
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/387 (46%), Positives = 245/387 (63%), Gaps = 33/387 (8%)
Query: 37 TNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITK 96
+ I D + VIKAQ L GGRGLG F NGFK GVH + +KM+G L+TK
Sbjct: 130 SKIRGDREGVDVVIKAQALTGGRGLGTFKNGFKGGVHMCTKPEQAEDFAKKMLGETLVTK 189
Query: 97 QTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLV 156
QT GI V KV + + V + RE YF I+ DR GPV++ SP+GGT IE+VA TP L+
Sbjct: 190 QTGAKGIEVAKVFLMERVWMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAEATPELI 249
Query: 157 KTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRG 216
+D+ G T+ + +A ++A L G
Sbjct: 250 FKENVDISTGPTD---EQVA------------------------------RLAKALGGEG 276
Query: 217 DLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFS 276
++ K T+++ L+++F+ VDAT +EINPL ET E E+ + DAK+N+DDNA FR K IF+
Sbjct: 277 EVLKKLETQIKNLYDMFIGVDATLVEINPLAETREGEIFACDAKLNYDDNAAFRHKEIFA 336
Query: 277 QNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGG 336
+ + ++ DPREV+AS Y+LNY+G+DGNIGCLVNGAGLAMATMDII L+GG PANFLDVGG
Sbjct: 337 KRDKTQEDPREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLYGGSPANFLDVGG 396
Query: 337 GVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEG 396
G EE + +AF I+ D VK ILVN+FGGI+ C IA G+V A K L P+++RL+G
Sbjct: 397 GATEEQVKKAFEILDGDDQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPVIIRLQG 456
Query: 397 TNVQEGKRILDESKLPLIFASDLDEAA 423
TNV+ ++I+ ES + +I A DL++AA
Sbjct: 457 TNVEPARKIIAESGIKMIVADDLEDAA 483
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 430 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 471
K L P+++RL+GTNV+ ++I+ ES + +I A DL++AA
Sbjct: 442 KDLGLKKPVIIRLQGTNVEPARKIIAESGIKMIVADDLEDAA 483
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
K L P+++RL+GTNV+ ++I+ ES + +I A DL++AA
Sbjct: 442 KDLGLKKPVIIRLQGTNVEPARKIIAESGIKMIVADDLEDAA 483
>gi|354546102|emb|CCE42831.1| hypothetical protein CPAR2_204740 [Candida parapsilosis]
Length = 415
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 241/391 (61%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L E VIKAQ L GGRG GHFD+G + GV ++ ++ + +M+GHK
Sbjct: 47 AEGAFDAAKKLGTDELVIKAQALTGGRGKGHFDSGLQGGVKLISSPEEAKDLASQMLGHK 106
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G V V + + + E Y I+ DR PV++ S GG DIE VAAK
Sbjct: 107 LITKQTGAKGKEVTAVYIVERRDAQSEAYVAILMDRAKQTPVIVASSQGGMDIEGVAAKD 166
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +KT P+ + +G+++ LA +IA SSL
Sbjct: 167 PSAIKTFPVPLEEGVSDKLATEIA-------------------------SSLG------- 194
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F D +AA +Q L+ F+ D TQ+EINPL ET + +V+++DAK+ FDDNA FRQ+
Sbjct: 195 -FTKDAIPEAAKTIQGLYKCFIDRDCTQVEINPLSETPDHKVLAMDAKLGFDDNAAFRQQ 253
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ DP+E +ASKY LN++ +DGNI +VNGAGLAMATMDIIKL+GGEPANFL
Sbjct: 254 EVFSWRDPTQEDPQEAEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFL 313
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GG E+I +AF +I SD NV ILVN+FGGIV C +AKGL+ A K+F L IP+VV
Sbjct: 314 DCGGTATPETIEKAFELILSDKNVNGILVNIFGGIVRCDYVAKGLIAATKNFNLDIPVVV 373
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+ E K +++ S L L DLD AA
Sbjct: 374 RLQGTNMAEAKELIENSGLKLYAFEDLDPAA 404
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F L IP+VVRL+GTN+ E K +++ S L L DLD AA +
Sbjct: 355 AKGLIAATKNFNLDIPVVVRLQGTNMAEAKELIENSGLKLYAFEDLDPAAEKIV 408
>gi|298712066|emb|CBJ26646.1| beta chain succinyl-coa synthetase synthetase [Ectocarpus
siliculosus]
Length = 463
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 173/405 (42%), Positives = 249/405 (61%), Gaps = 38/405 (9%)
Query: 17 KPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTN 76
K T +K C E I+ K+ VIKAQ+L+GGRG GHFDNGF+SGVH
Sbjct: 68 KMAETPEDAEKACAE-------IMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCL 120
Query: 77 NVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVI 136
D +M+G KLITKQT + G+ +KV++ + + + RE Y I+ DR GPV++
Sbjct: 121 KPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIV 180
Query: 137 ISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKL 196
P GGT IE++A P L+ +D+ G+T++ A IA+ L+ D + A +
Sbjct: 181 ACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGK---- 236
Query: 197 WNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVIS 256
T ++ ++ +F+ D T +EINPL ET E V++
Sbjct: 237 ---------------------------TLLKNMYAMFIERDCTLVEINPLAETPEGRVMA 269
Query: 257 VDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMA 316
DAK+NFDDNAE+RQK+ F + ++ D REV+A+KY+LNY+G+ GNIGC+VNGAGLAM+
Sbjct: 270 CDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMS 329
Query: 317 TMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKG 376
TMDIIKL GG+PANFLDVGGG EE + +AF ++++D V ILVN+FGGI+ C IA G
Sbjct: 330 TMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASG 389
Query: 377 LVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
++NA KS + P+V+RL+GTNV++ ++ S +I ++DLD+
Sbjct: 390 VINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDD 434
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A+ ++NA KS + P+V+RL+GTNV++ ++ S +I ++DLD+
Sbjct: 387 ASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDD 434
>gi|452839998|gb|EME41937.1| succinyl-CoA synthetase-like protein [Dothistroma septosporum
NZE10]
Length = 440
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/390 (46%), Positives = 241/390 (61%), Gaps = 33/390 (8%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
+ A + + ++ VIKAQ+LAGGRG GHFDNGFK GV + ++ + ++MIGHKL
Sbjct: 58 QEAQEVASQIGGEDMVIKAQVLAGGRGKGHFDNGFKGGVRIVYSPREASILADQMIGHKL 117
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
ITKQT + G N V + + RE Y I+ DR GPV++ S GG DIE VA + P
Sbjct: 118 ITKQTGERGRICNSVYIVERKFARREFYLAILMDRQSQGPVIVASSQGGMDIETVAKENP 177
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ T ID+H+G+T+ +A +IA L F Q I
Sbjct: 178 EAIITTKIDIHKGVTDDIATNIATQLGFS----------------------EQCIQ---- 211
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
A +QKL+ +F+ DATQ+EINPL ET + +V+ +DAK+NFDDNAEFRQK
Sbjct: 212 -------PAKDTIQKLYKVFMEKDATQIEINPLSETSDHQVLCMDAKLNFDDNAEFRQKE 264
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
IFS + S+ D EV A + LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 265 IFSWRDPSQEDADEVKAGEVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLD 324
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG E+I AF +I+SD V I VN+FGGIV C IAKGL+N +S L P++ R
Sbjct: 325 VGGGATPEAIKSAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLINVVESMNLRTPVIAR 384
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L+GTN ++ +++++ES L + DL AA
Sbjct: 385 LQGTNSEQAEKLINESGLKIFSIDDLQTAA 414
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N +S L P++ RL+GTN ++ +++++ES L + DL AA
Sbjct: 365 AKGLINVVESMNLRTPVIARLQGTNSEQAEKLINESGLKIFSIDDLQTAA 414
>gi|353236830|emb|CCA68816.1| probable beta-succinyl CoA synthetase precursor [Piriformospora
indica DSM 11827]
Length = 421
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 178/392 (45%), Positives = 244/392 (62%), Gaps = 34/392 (8%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
+ A ++ K+ + VIKAQ+LAGGRG G FDNGF+ GVH N+ ++ I KM+ KL
Sbjct: 52 QEAYDVAKNFGTDKLVIKAQVLAGGRGKGKFDNGFQGGVHVINSPEEAKEIAGKMLNAKL 111
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
ITKQT G N VM+A+ + + E Y ++ DR PV++ S GG +IE VAAK P
Sbjct: 112 ITKQTGAAGRICNAVMLAERRDPSHEYYIAVLNDRAGQTPVIVASNQGGMNIEEVAAKDP 171
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQG-DLKAKAATEVQKLWNLFLSSLAQKIADFL 212
+ + T PID G++++ A +AD L F D K +AA QKL+ LF
Sbjct: 172 NAIITTPIDFENGLSDAEAAQLADKLGFATPDAKKQAADIFQKLYKLFKDK--------- 222
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
DATQ+EINPL ET + V+ +DAK FDDNAEFRQ+
Sbjct: 223 ------------------------DATQIEINPLAETKDGAVLCMDAKFGFDDNAEFRQQ 258
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++++ + ++ DP EV+A KYNLN++ +DGNIGCLVNGAGLAMATMD++KLHGG+PANFL
Sbjct: 259 DVYALRDTTQEDPAEVEAQKYNLNFIKLDGNIGCLVNGAGLAMATMDVLKLHGGDPANFL 318
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E++ +AF ++ SD V I +N+FGGI+ C IA+G++ A K +L +PLVV
Sbjct: 319 DVGGGATPETVKKAFELLLSDKGVTAIFLNIFGGIMRCDYIAEGVIKATKELQLRVPLVV 378
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RL+G E K ++ ES L + +LDEAAS
Sbjct: 379 RLKGNKEMEAKELIRESGLKIYAFDELDEAAS 410
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K +L +PLVVRL+G E K ++ ES L + +LDEAA+
Sbjct: 360 AEGVIKATKELQLRVPLVVRLKGNKEMEAKELIRESGLKIYAFDELDEAAS 410
>gi|212535888|ref|XP_002148100.1| succinyl-CoA synthetase beta subunit, putative [Talaromyces
marneffei ATCC 18224]
gi|210070499|gb|EEA24589.1| succinyl-CoA synthetase beta subunit, putative [Talaromyces
marneffei ATCC 18224]
Length = 444
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/394 (45%), Positives = 240/394 (60%), Gaps = 36/394 (9%)
Query: 33 ARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ARTA + K + + VIKAQ+LAGGRG G FDNG K GV + + E+MI
Sbjct: 58 ARTADEAEAVAKSIGGDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMI 117
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GHKLITKQT G N V + + RE Y I+ DR PV++ S GG DIE VA
Sbjct: 118 GHKLITKQTGAAGRLCNAVYIVERKFARREFYLAILMDRQTQSPVIVSSSQGGMDIETVA 177
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP ++T PID+ G+T+ +A+ IA L F AQ I
Sbjct: 178 KETPDAIRTTPIDITIGVTDEIARSIATDLGFS----------------------AQCIE 215
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
D A +Q L+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNAEF
Sbjct: 216 D-----------AKNTIQNLYKVFIEKDATQIEINPLSETSDHQVLAMDAKLGFDDNAEF 264
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK IFS + ++ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PA
Sbjct: 265 RQKEIFSWRDTTQEDADEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPA 324
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P
Sbjct: 325 NFLDVGGGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMGLRTP 384
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
++ RL+GTN+++ +++LDES L + DL AA
Sbjct: 385 VIARLQGTNMEQARKLLDESNLKIFCIEDLQSAA 418
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P++ RL+GTN+++ +++LDES L + DL AA
Sbjct: 369 AQGLINVVRDMGLRTPVIARLQGTNMEQARKLLDESNLKIFCIEDLQSAA 418
>gi|345569390|gb|EGX52256.1| hypothetical protein AOL_s00043g45 [Arthrobotrys oligospora ATCC
24927]
Length = 444
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/388 (44%), Positives = 237/388 (61%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K + + VIKAQ+LAGGRG G FDNG K GV + + +MIGHKLIT
Sbjct: 64 AEKVAKSIGGDDMVIKAQVLAGGRGKGTFDNGLKGGVRVVYSPAEAKLFAGEMIGHKLIT 123
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V + + RE Y I+ DR GPV++ S GG DIE VA ++P
Sbjct: 124 KQTGAAGKLCTSVFIVERKFARREFYLAILMDRATQGPVIVASSQGGMDIEAVAKESPEA 183
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+HQG+T+ +AQ IA L F AA +Q L+ +F+
Sbjct: 184 IVTTPIDIHQGVTDEIAQKIAKQLGFSPQCINDAAKTIQNLYKVFIEK------------ 231
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
DATQ+EINPL ET++ +V+ +DAK FDDNA+FRQK +F
Sbjct: 232 ---------------------DATQIEINPLAETNDHKVLCMDAKFGFDDNADFRQKEVF 270
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S ++++ DP EV A++Y LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 271 SWRDIAQEDPDEVQAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG ++I +AF +I+ D + I VN+FGGIV C IA+GL+ ++ L +P+V RL+
Sbjct: 331 GGATPKAIQRAFELITKDPKITAIFVNIFGGIVRCDDIARGLIGTVQNMNLRVPVVARLQ 390
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+QE +++++ES L + DL AA
Sbjct: 391 GTNMQEAQKLINESGLKIFSLEDLQSAA 418
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 468 DEAASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
D A L+ ++ L +P+V RL+GTN+QE +++++ES L + DL AA
Sbjct: 367 DIARGLIGTVQNMNLRVPVVARLQGTNMQEAQKLINESGLKIFSLEDLQSAA 418
>gi|167518784|ref|XP_001743732.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777694|gb|EDQ91310.1| predicted protein [Monosiga brevicollis MX1]
Length = 455
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 169/374 (45%), Positives = 238/374 (63%), Gaps = 33/374 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K ++ + VIKAQ+LAGGRG GHFDNGF+ GVH +I + MIGH+LIT
Sbjct: 59 AVQVAKQMSTDKVVIKAQVLAGGRGKGHFDNGFQGGVHVVKGEDEIRSAADNMIGHRLIT 118
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N V +A+ ++I +E YF ++ DR GP ++ S GG DIE VA TP
Sbjct: 119 KQTDEHGRPCNMVQIAECMDIDKEFYFALLMDRSMGGPCIVGSSQGGMDIEAVAEATPDA 178
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +P+D+ +G++ + A ++A + F
Sbjct: 179 IIKVPVDIKEGLS---------------------------------TDKAIQVAKDMGFA 205
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
D+ KAA E+ L+ LFL D T +EINPLV+T +V+ +DAK+NFDDNA FRQK++F
Sbjct: 206 DDIAPKAAQEMINLYTLFLEKDCTLVEINPLVQTKGGDVMCLDAKVNFDDNAGFRQKDVF 265
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ +VS+ + +V+A+KY+LNY+ +DG IGCLVNGAGLAMATMDII+L+GG PANFLDVG
Sbjct: 266 EKRDVSQENAADVEAAKYDLNYIDLDGTIGCLVNGAGLAMATMDIIQLYGGRPANFLDVG 325
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + AF++I+SD +V ILVN+FGGI+ C IA+G++ A L++P+VVRL+
Sbjct: 326 GGATAEQVTAAFKLITSDPSVSAILVNIFGGIMRCDVIAEGIIEAASELHLNVPIVVRLQ 385
Query: 396 GTNVQEGKRILDES 409
GT E K ++ ES
Sbjct: 386 GTRKAEAKALIAES 399
>gi|412988279|emb|CCO17615.1| succinyl-CoA synthetase subunit beta [Bathycoccus prasinos]
Length = 492
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 187/398 (46%), Positives = 251/398 (63%), Gaps = 40/398 (10%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFD-NGFKSGVHFTNNVQDIPPILEKM 88
+E+ + A+ +K L E VIK+QILAGGRGLG F GFK GVH N + EKM
Sbjct: 123 VEEVQKASEQMKCLGDDEVVIKSQILAGGRGLGTFKFGGFKGGVHIVKN-EMARETAEKM 181
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+G+ L+TKQ+ G VN ++VA+ + +E YF I+ DR P++I S GGT IE++
Sbjct: 182 LGNVLVTKQSGPEGKPVNALLVARKMKFAKEMYFAILLDRKSAKPMIIASAEGGTSIEDL 241
Query: 149 AAKTPHLVKTIPIDVHQ---GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
A P + ID+++ GI A D+A+ L
Sbjct: 242 AESNPEKIIKKYIDINEESGGIKREDALDLAEKL-------------------------- 275
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
AD K AA + Q L+ F D T +E+NP+ ET + + + DAK+NFDD
Sbjct: 276 -GCAD--------KEDAAKQFQALYETFKKTDCTMIEVNPMAETTDGVLYAADAKLNFDD 326
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NAE+RQK+IFSQ + S+ D REV+A+KY+LNY+G+DGNIGC+VNGAGLAMATMDII+ G
Sbjct: 327 NAEYRQKDIFSQRDASQEDAREVEAAKYDLNYIGLDGNIGCMVNGAGLAMATMDIIQGKG 386
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
G PANFLDVGG +EE +++AF+I++ D VK ILVN+FGGI+ C IA G+VNA K
Sbjct: 387 GSPANFLDVGGNASEEQVVEAFKILNKDPKVKAILVNIFGGIMKCDVIASGIVNAVKVVG 446
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L+IPLVVRLEGTNV+EG+RI+ +S L + A DLD+AA
Sbjct: 447 LNIPLVVRLEGTNVEEGRRIMKQSGLNIETAKDLDDAA 484
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L+IPLVVRLEGTNV+EG+RI+ +S L + A DLD+AA+ + A
Sbjct: 435 ASGIVNAVKVVGLNIPLVVRLEGTNVEEGRRIMKQSGLNIETAKDLDDAADKAVKA 490
>gi|390604220|gb|EIN13611.1| succinyl-CoA synthetase beta chain SSC-beta [Punctularia
strigosozonata HHB-11173 SS5]
Length = 415
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 177/388 (45%), Positives = 247/388 (63%), Gaps = 34/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A ++ K+ + VIKAQ+LAGGRG G FDNG + GVH ++ + KMIG KLIT
Sbjct: 53 AYDVAKNFGTDQLVIKAQVLAGGRGKGKFDNGLQGGVHMVSSPEQAKDYASKMIGAKLIT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VM+A+ E Y ++ DR NGPV++ S GG +IE VAAK P
Sbjct: 113 KQTGAAGRICNAVMLAERRQPKHEYYVAVLNDRASNGPVLVASAQGGMNIEEVAAKDPEA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T I + QG+ ++ A +A+ L FQG K +AA ++F++
Sbjct: 173 IITTSIPL-QGLDKATALSVAEKLGFQGSAKDEAA-------DIFIN------------- 211
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+ +F DATQ+EINPL ET + V+ +DAK FDDNA+FRQK++F
Sbjct: 212 -------------LYKIFKDKDATQIEINPLAETTDGAVLCMDAKFGFDDNADFRQKDVF 258
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ +VS+ +P EV+A+K NLN++ +DGN+GCLVNGAGLAMATMD++ LHGG+PANFLDVG
Sbjct: 259 ALRDVSQEEPSEVEAAKANLNFIKLDGNVGCLVNGAGLAMATMDVLSLHGGQPANFLDVG 318
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E++ +AF ++ +D NVKCI +N+FGGI+ C IA+G++ A K L+IPLVVRL+
Sbjct: 319 GGATPETVKKAFELLLADPNVKCIFINIFGGIMRCDYIAEGVIKATKELGLTIPLVVRLK 378
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT E K+++ +S L +I LD+AA
Sbjct: 379 GTKEDEAKKMIADSGLKIIAFDGLDDAA 406
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L+IPLVVRL+GT E K+++ +S L +I LD+AA +
Sbjct: 357 AEGVIKATKELGLTIPLVVRLKGTKEDEAKKMIADSGLKIIAFDGLDDAAERAV 410
>gi|241958942|ref|XP_002422190.1| succinyl-CoA ligase, beta subunit, mitochondrial precursor,
putative; succinyl-CoA synthetase beta chain, putative
[Candida dubliniensis CD36]
gi|223645535|emb|CAX40194.1| succinyl-CoA ligase, beta subunit, mitochondrial precursor,
putative [Candida dubliniensis CD36]
Length = 415
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 177/388 (45%), Positives = 237/388 (61%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L E VIKAQ L GGRG GHFD+G + GV ++ ++ + +M+ HKLIT
Sbjct: 50 AYDAAKKLGTNELVIKAQALTGGRGKGHFDSGLQGGVKLISSAEEAKDLASQMLNHKLIT 109
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V V + + + E Y I+ DR PV++ S GG DIE VAAK P
Sbjct: 110 KQTGAAGKEVTAVYIVERRDAASEAYVAILMDRARQTPVIVASAQGGMDIEGVAAKDPSA 169
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+KT P+ + +G+++SLA +IA L F
Sbjct: 170 IKTFPVPLEEGVSDSLATEIAGA---------------------------------LGFT 196
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
D +AA +Q L+ F+ D TQ+EINPL ET + +V+++DAK+ FDDNA FRQ+ +F
Sbjct: 197 QDAIPEAAKTIQSLYKCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVF 256
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ DP+E +ASKY LN++ +DGNI +VNGAGLAMATMDIIKL+GGEPANFLD G
Sbjct: 257 SWRDPTQEDPQEAEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCG 316
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G E+I +AF +I SD V I VN+FGGIV C +AKGL+ A K+FKL IP+VVRL+
Sbjct: 317 GTATPETIEKAFELILSDPKVNGIFVNIFGGIVRCDYVAKGLIAATKNFKLDIPVVVRLQ 376
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+ E K +++ S L L DLD AA
Sbjct: 377 GTNLAEAKELIENSGLKLYAFEDLDPAA 404
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+FKL IP+VVRL+GTN+ E K +++ S L L DLD AA +
Sbjct: 355 AKGLIAATKNFKLDIPVVVRLQGTNLAEAKELIENSGLKLYAFEDLDPAAEKIV 408
>gi|2351687|gb|AAB68610.1| adhesin protein AP51-2, partial [Trichomonas vaginalis]
Length = 405
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/395 (46%), Positives = 241/395 (61%), Gaps = 37/395 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKM 88
ART A K + VIKAQ+ GGRG GH+ + GFKSGVHF + + I ++M
Sbjct: 31 ARTPEEAAAAFKKMGLPAAVIKAQVYCGGRGKGHWKETGFKSGVHFVKSADEAAKIAKEM 90
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+GH L+TKQT G+ VM++ V + RE YF I+ DR PVVI S GG +IE V
Sbjct: 91 LGHHLVTKQTGADGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEV 150
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
AAK P + +D +GIT +A +I+ L G A E
Sbjct: 151 AAKHPEKILKFQLDGVEGITRDVAVNISKQLGLTGK-----AYE---------------- 189
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
E+QKLW LF+ DATQ+E+NPL ET + +I+VD+K NFDD+A
Sbjct: 190 ------------NGIEEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAH 237
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+RQK IF ++ + +P E+ A KY LNYV +DGN+ CLVNGAGLAMATMD+I+L GG+P
Sbjct: 238 YRQKQIFGYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIQLAGGDP 297
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLD+GGG +E ++ + F IISS +VK ILVN+FGGIV C +A G++ A K L +
Sbjct: 298 ANFLDLGGGASEAAVTEGFTIISSQPHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKV 357
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRLEGTNV GK+++ ES LP+I A +L +A
Sbjct: 358 PLVVRLEGTNVDAGKKLIRESGLPIIPADNLTDAG 392
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA ++ A K L +PLVVRLEGTNV GK+++ ES LP+I A +L +A
Sbjct: 343 AAGVIAAFKKVGLKVPLVVRLEGTNVDAGKKLIRESGLPIIPADNLTDAG 392
>gi|449296601|gb|EMC92620.1| hypothetical protein BAUCODRAFT_26990 [Baudoinia compniacensis UAMH
10762]
Length = 462
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 243/393 (61%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+AR A + K + + VIKAQ+LAGGRG GHFDNGFK GV + ++ + E+MIG
Sbjct: 77 HNAREAEAVAKTIEGDDMVIKAQVLAGGRGKGHFDNGFKGGVRIVYSPREAGILAEQMIG 136
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
HKLITKQT + G N V + + RE Y ++ DR PV++ S GG DIE VA
Sbjct: 137 HKLITKQTGERGRICNSVYIVERKFARREFYLAVLMDRQSQAPVIVASSQGGMDIETVAK 196
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+ P + T +++H+G+T+ +A+ +A L F Q I
Sbjct: 197 ENPDAIITTKVNIHEGVTDQMAEGVARELGFS----------------------EQCIG- 233
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+A +QKL+ +F+ DATQ+EINPL ET + +V+ +DAK+NFDDNA+FR
Sbjct: 234 ----------QAKDTIQKLYKIFMEKDATQIEINPLSETSDHQVLCMDAKLNFDDNADFR 283
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
Q+ IFS + S+ D EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PAN
Sbjct: 284 QEEIFSWRDTSQEDADEVKAAKAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPAN 343
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E+I AF +I+SD V I VN+FGGIV C IAKGL+ + L P+
Sbjct: 344 FLDVGGGATPEAIKLAFELITSDPKVTAIFVNIFGGIVRCDAIAKGLIQVVEQMNLRTPV 403
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+ RL+GTN+++ ++++ES L + DL AA
Sbjct: 404 IARLQGTNMEQAHKLINESGLKIFSIDDLATAA 436
>gi|66824365|ref|XP_645537.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
gi|74857927|sp|Q55AI5.1|SUCB1_DICDI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=ATP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-A chain; Short=SCS-betaA; Flags:
Precursor
gi|60473670|gb|EAL71611.1| succinate-CoA ligase [Dictyostelium discoideum AX4]
Length = 445
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 249/393 (63%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E A I + +N ++ V+KAQ+LAGGRG G F +G K GV ++ +D+ KM+G
Sbjct: 60 ETPEEAEKIAEVMNTQDLVVKAQVLAGGRGKGIFTSGLKGGVQLCSSAEDVKKFASKMLG 119
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
H L+TKQT + G V++V V + + +E YF I+ DR GPV++ SP GG DIE VA
Sbjct: 120 HTLVTKQTGEDGKVVHQVYVTERHFLRKEMYFAILMDRKAGGPVMVASPEGGVDIEGVAR 179
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P + PID+ G+ + +A+ L F N+ S+AQ
Sbjct: 180 DNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFSKK-------------NI---SMAQ---- 219
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+++KL++ F+ D T +EINPL ET +V+ +DAK+NFDDNA FR
Sbjct: 220 -------------DQMKKLYDFFIKNDCTLVEINPLAETASGDVLCMDAKLNFDDNAAFR 266
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
+IF + S+ DPREV A++++LNY+G+DGNIGCLVNGAGLAMA+MDIIKL+GG PAN
Sbjct: 267 HPDIFKLRDKSQEDPREVKAAEFDLNYIGLDGNIGCLVNGAGLAMASMDIIKLYGGSPAN 326
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++ + +A ++ISSD VK ILVN+FGGI+ C IA G++ A K ++ PL
Sbjct: 327 FLDVGGGATQKQVTEAIKLISSDKKVKSILVNIFGGIMKCDVIALGIIAALKELSIATPL 386
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRL+GTNV+ K+I+++S L LI A +LD+AA
Sbjct: 387 VVRLQGTNVEAAKKIMEDSGLRLIAADNLDDAA 419
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K ++ PLVVRL+GTNV+ K+I+++S L LI A +LD+AA
Sbjct: 370 ALGIIAALKELSIATPLVVRLQGTNVEAAKKIMEDSGLRLIAADNLDDAAQ 420
>gi|448527286|ref|XP_003869460.1| Lsc2 succinate-CoA ligase beta subunit [Candida orthopsilosis Co
90-125]
gi|380353813|emb|CCG23325.1| Lsc2 succinate-CoA ligase beta subunit [Candida orthopsilosis]
Length = 415
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 239/391 (61%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L E VIKAQ L GGRG GHFD+G + GV ++ + + +M+GHK
Sbjct: 47 AEGAFDAAKKLGTDELVIKAQALTGGRGKGHFDSGLQGGVKLISSPDEAKDLASQMLGHK 106
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G V V + + + E Y I+ DR PV++ S GG DIE VAAK
Sbjct: 107 LITKQTGAKGKEVTAVYIVERRDAQSEAYVAILMDRAKQTPVIVASAQGGMDIEGVAAKD 166
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +KT P+ + +G+++ LA +IA SSL
Sbjct: 167 PSAIKTFPVPLEEGVSDKLATEIA-------------------------SSLG------- 194
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F D +AA +Q L+ F+ D TQ+EINPL ET + +V+++DAK+ FDDNA FRQ+
Sbjct: 195 -FTKDAVPEAAKTIQGLYKCFIDRDCTQVEINPLSETPDHKVLAMDAKLGFDDNAAFRQE 253
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ DP+E +ASKY LN++ +DGNI +VNGAGLAMATMDIIKL+GGEPANFL
Sbjct: 254 EVFSWRDPTQEDPQEAEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFL 313
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GG E+I +AF +I SD NV I VN+FGGIV C +AKGL+ A K+F L IP+VV
Sbjct: 314 DCGGTATPETIEKAFELILSDKNVNGIFVNIFGGIVRCDYVAKGLIAATKNFNLEIPVVV 373
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+ E K +++ S L L DLD AA
Sbjct: 374 RLQGTNMAEAKELIENSGLKLYAFEDLDPAA 404
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F L IP+VVRL+GTN+ E K +++ S L L DLD AA +
Sbjct: 355 AKGLIAATKNFNLEIPVVVRLQGTNMAEAKELIENSGLKLYAFEDLDPAAEKIV 408
>gi|358057369|dbj|GAA96718.1| hypothetical protein E5Q_03389 [Mixia osmundae IAM 14324]
Length = 735
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 180/404 (44%), Positives = 250/404 (61%), Gaps = 36/404 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K + + VIKAQ+LAGGRG GHF+ G K GV ++ + +MIGHKLIT
Sbjct: 367 AYQVAKSMGKDKLVIKAQVLAGGRGKGHFEGGLKGGVQMVDSPEQAKEYASQMIGHKLIT 426
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N +M+A+ E Y I+ DR NGP ++ S GG +IE+VA + P
Sbjct: 427 KQTGAAGRICNAIMLAERRPPKHEYYLAILNDRSSNGPALVASARGGMNIEDVAKEDPSA 486
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID +G++ S A++ A L F+G + +AA KL+ LF
Sbjct: 487 ILTHPIDYTKGLSSSEAKEFAGKLGFKGKQQDQAADTFVKLYKLFKEK------------ 534
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
DATQ+EINPL E+++ EV+ +DAK+ FDDNAEFRQ+ IF
Sbjct: 535 ---------------------DATQIEINPLAESEDGEVLCMDAKLGFDDNAEFRQEAIF 573
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++++ D EV+A++Y LN++ +DGNIGCLVNGAGLAMATMD++KL+GG PANFLDVG
Sbjct: 574 KLRDITQEDKAEVEAAEYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDVG 633
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E++ +AF ++ S+S VK I VN+FGGI+ C IA+G++ A K +L IPLVVRL+
Sbjct: 634 GGATAEAVKKAFELLLSESGVKSIFVNIFGGIMRCDVIAEGIIKATKELQLEIPLVVRLQ 693
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS-IPL 438
GT E K++++ES L + LDEAAS A +S K+ IP+
Sbjct: 694 GTKEAEAKKMINESSLKIYAFDGLDEAAS--KAVESAKIGQIPV 735
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K +L IPLVVRL+GT E K++++ES L + LDEAA+
Sbjct: 672 AEGIIKATKELQLEIPLVVRLQGTKEAEAKKMINESSLKIYAFDGLDEAAS 722
>gi|300176556|emb|CBK24221.2| Succinyl-CoA Synthetase subunit ? (SCS?) [Blastocystis hominis]
Length = 433
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/382 (47%), Positives = 238/382 (62%), Gaps = 39/382 (10%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
++V+KAQ+LAGGRG GH++NG + GV ++ I ++MIGHKLITKQT GIN N
Sbjct: 77 KFVVKAQVLAGGRGKGHWENGMQGGVKLAKTPDEVYAIAQEMIGHKLITKQTGAKGINCN 136
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
KVMV +V I +E Y I+ DR P++I + GG IE VA K P + IPI V G
Sbjct: 137 KVMVCGAVKILKEFYLAILLDRAMGCPMIIATSQGGMGIEEVAQKCPECLFKIPISVKNG 196
Query: 167 IT-ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
T E LA K+A L +GDL A
Sbjct: 197 PTKEQLA----------------------------------KLASDLGLQGDLAKDCAAN 222
Query: 226 VQKLWNLFLSVDATQLEINPL----VETDEREVISVDAKINFDDNAEFRQKNIFSQNEVS 281
VQ L+N+F D T +EINPL TDE+ V +DAK+ FD++AEFRQ++IF+ + S
Sbjct: 223 VQALYNVFDRCDCTMVEINPLGVIETPTDEQVVCCLDAKLQFDNDAEFRQRDIFAMRDKS 282
Query: 282 ESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEE 341
+ DPR+V AS LNY+G++GNIGC+VNGAGLAMATMD I GG ANFLDVGG +E
Sbjct: 283 QEDPRDVRASMAGLNYIGLEGNIGCMVNGAGLAMATMDTINYFGGSAANFLDVGGNAKKE 342
Query: 342 SIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQE 401
I +A RI+ SD++VK IL+N+FGGI+ C +A+G+V A + L IPLVVRLEGTNV++
Sbjct: 343 QISEALRILRSDAHVKSILINIFGGIMRCDVVAQGIVEAAREAALDIPLVVRLEGTNVEK 402
Query: 402 GKRILDESKLPLIFASDLDEAA 423
GK+I+ ES L +I A DL +AA
Sbjct: 403 GKQIIKESGLNIIPADDLGDAA 424
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A + L IPLVVRLEGTNV++GK+I+ ES L +I A DL +AA
Sbjct: 375 AQGIVEAAREAALDIPLVVRLEGTNVEKGKQIIKESGLNIIPADDLGDAA 424
>gi|187736200|ref|YP_001878312.1| succinyl-CoA synthetase, beta subunit [Akkermansia muciniphila ATCC
BAA-835]
gi|226734104|sp|B2UMH5.1|SUCC_AKKM8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|187426252|gb|ACD05531.1| succinyl-CoA synthetase, beta subunit [Akkermansia muciniphila ATCC
BAA-835]
Length = 393
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/400 (46%), Positives = 252/400 (63%), Gaps = 33/400 (8%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDI 81
V + + A+ A +++ +YV+KAQ+ AGGRG G F NGFK GVH +V+++
Sbjct: 17 VATPKGIAASTAQEAAQTARNMGLSQYVVKAQVHAGGRGKGTFKNGFKGGVHVVKSVEEV 76
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ KM+ L+TKQT + G V+K+MVA++V++ +E YF I+QDR PV++ S G
Sbjct: 77 EEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYFAILQDRARECPVIVASTEG 136
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VAA P + + + I +L L FQ
Sbjct: 137 GMDIEEVAATRPEAI------IREHINPALG-----ILPFQ------------------- 166
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
A KIA LE G L +A + ++ LF ++D + +EINPLV T + V ++DAK
Sbjct: 167 ---ALKIAVALELTGPLLRQATKLITNVYKLFTALDCSLVEINPLVVTTDDRVCALDAKF 223
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
NFDDNA +R I + +E DPREV+A KY+LNY+G+DGNIGC+VNGAGLAMATMDII
Sbjct: 224 NFDDNALYRHPEIMEMRDETEEDPREVEAGKYDLNYIGLDGNIGCMVNGAGLAMATMDII 283
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
K +GGEPANFLDVGG EE + AFRI++SD NVK +LVN+FGGI+ C IA+G+V A
Sbjct: 284 KYYGGEPANFLDVGGSATEEMVTNAFRILTSDKNVKALLVNIFGGIMRCDVIAQGIVAAA 343
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
K+ + IPLVVRLEGTNV+ GK+IL +S + +I A +LDE
Sbjct: 344 KNIDMKIPLVVRLEGTNVEIGKKILADSGIAIIPADNLDE 383
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A +V A K+ + IPLVVRLEGTNV+ GK+IL +S + +I A +LDE
Sbjct: 336 AQGIVAAAKNIDMKIPLVVRLEGTNVEIGKKILADSGIAIIPADNLDE 383
>gi|453083290|gb|EMF11336.1| succinate-CoA ligase [Mycosphaerella populorum SO2202]
Length = 436
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/393 (45%), Positives = 238/393 (60%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+A+ A + K + + VIKAQ+LAGGRG GHF NGFK GV + ++ + ++MIG
Sbjct: 51 HNAKEAEEVAKTIGGDDMVIKAQVLAGGRGKGHFTNGFKGGVRIVYSPREASILADQMIG 110
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
KLITKQT + G N V + + RE Y I+ DR GPV++ S GG DIE VA
Sbjct: 111 QKLITKQTGEKGRICNSVYIVERKFARREFYLAILMDRATQGPVIVASSQGGMDIETVAK 170
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
++P + T PID+H+G+T+ +A+ IA L F A +QKL+ +F
Sbjct: 171 ESPDAIITTPIDIHKGVTDEIARGIATKLGFSEQCIEDAKDTIQKLYKVFQEK------- 223
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
DATQ+EINPL ET + +V+ +DAK+NFDDNAEFR
Sbjct: 224 --------------------------DATQIEINPLSETSDHKVLCMDAKLNFDDNAEFR 257
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +FS + S+ D EV A + LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PAN
Sbjct: 258 QKEVFSWRDPSQEDADEVKAGESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPAN 317
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E+I QAF +I+SD V I VN+FGGIV C IAKGL+ +S L P+
Sbjct: 318 FLDVGGGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAKGLIGVVESMNLRTPV 377
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+ RL+GTN + ++++ES L + DL AA
Sbjct: 378 IARLQGTNHEAAAKLINESGLKIFSIDDLQTAA 410
>gi|338715474|ref|XP_001490027.3| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like isoform 1 [Equus caballus]
Length = 405
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 245/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 25 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 84
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 85 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 144
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 145 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 171
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 172 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 231
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 232 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 291
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 292 GGATVHQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 351
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 352 GTRVDDAKALITDSGLKILACDDLDEAAKMV 382
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 330 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 383
>gi|169609801|ref|XP_001798319.1| hypothetical protein SNOG_07991 [Phaeosphaeria nodorum SN15]
gi|111063147|gb|EAT84267.1| hypothetical protein SNOG_07991 [Phaeosphaeria nodorum SN15]
Length = 441
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 177/392 (45%), Positives = 240/392 (61%), Gaps = 33/392 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+A A + K + + VIKAQ+LAGGRG G FDNGFK GV + ++ + ++MIGH
Sbjct: 57 NAAEAEQVAKSIGGDDAVIKAQVLAGGRGKGTFDNGFKGGVRVVYSPREAAILADQMIGH 116
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
KLITKQT G N V + + RE Y I+ DR GPV++ S GG DIE VA +
Sbjct: 117 KLITKQTGAAGRLCNAVFIVERKFARREFYLAILMDRGSQGPVIVASSQGGMDIETVAKE 176
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
P + T PI++H G+T+ +A+ IA L F Q I D
Sbjct: 177 NPEAIITTPINIHVGVTDEIARTIATELGFS----------------------EQCIED- 213
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQ
Sbjct: 214 ----------AKDTIQKLYKVFMERDATQIEINPLSETTDHQVLAMDAKLGFDDNADFRQ 263
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K +F + ++ DP EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANF
Sbjct: 264 KEVFEWRDFTQEDPDEVKAAKVGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANF 323
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG E+I QAF +I+SD V I VN+FGGIV C IA+GL+ + L P++
Sbjct: 324 LDVGGGATPEAIRQAFDLITSDPKVTAIFVNIFGGIVRCDAIAQGLIQVVQQMNLKTPVI 383
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN++ ++L++S L + DL AA
Sbjct: 384 ARLQGTNMEAAHKLLNDSGLKIFSIDDLQAAA 415
>gi|50427905|ref|XP_462565.1| DEHA2G23584p [Debaryomyces hansenii CBS767]
gi|49658235|emb|CAG91076.1| DEHA2G23584p [Debaryomyces hansenii CBS767]
Length = 414
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/393 (45%), Positives = 242/393 (61%), Gaps = 33/393 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L + V+KAQ L GGRG GHFDNGF+ GV ++ ++ + EKM+GHKLIT
Sbjct: 50 AYEVAKALGTNDLVVKAQALTGGRGKGHFDNGFQGGVKLISSPEEAKELAEKMLGHKLIT 109
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G V V + + + E Y I+ DR P+++ S GG DIE VAAK P
Sbjct: 110 KQTGEAGKEVTAVYIVERRDARTEAYLAILMDRSTQTPLIVASSQGGMDIEGVAAKDPDA 169
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+K+ P+ + +G+++ LA DIA L + +A E
Sbjct: 170 IKSFPVPLEEGVSDKLAIDIASVLGYT----QEAIPE----------------------- 202
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
AA VQ L+ +F+ D TQ+EINPL ET + +V+++DAK+NFDDNA FRQK +F
Sbjct: 203 ------AAKTVQNLYKVFMERDCTQVEINPLSETPDHKVLAMDAKLNFDDNAAFRQKEVF 256
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + S+ DP EV A++Y LN++ +DGNI +VNGAGLAMATMDIIKL+GG PANFLD G
Sbjct: 257 SWRDPSQEDPEEVTAAEYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGAPANFLDCG 316
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G E+I +AF +I SD V I VN+FGGIV C +A+GL+ A K+F L IP+VVRL+
Sbjct: 317 GTATPETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFNLDIPVVVRLQ 376
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
GTN+ + K +++ S L L DLD AA + A
Sbjct: 377 GTNMAKAKELIENSGLKLYAFEDLDPAAEKIVA 409
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F L IP+VVRL+GTN+ + K +++ S L L DLD AA +
Sbjct: 355 AEGLIAATKNFNLDIPVVVRLQGTNMAKAKELIENSGLKLYAFEDLDPAAEKIV 408
>gi|238880090|gb|EEQ43728.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Candida
albicans WO-1]
Length = 415
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/388 (45%), Positives = 235/388 (60%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L E VIKAQ L GGRG GHFD+G + GV ++ ++ + +M+ HKLIT
Sbjct: 50 AYDAAKKLGTNELVIKAQALTGGRGKGHFDSGLQGGVKLISSAEEAKDLASQMLNHKLIT 109
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V V + + + E Y I+ DR PV++ S GG DIE VAAK P
Sbjct: 110 KQTGAAGKEVTAVYIVERRDAASEAYVAILMDRTRQTPVIVASAQGGMDIEGVAAKDPSA 169
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+KT P+ + +G+++SLA +IA L F
Sbjct: 170 IKTFPVPLEEGVSDSLATEIAGA---------------------------------LGFT 196
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
D +AA +Q L+ F+ D TQ+EINPL ET + +V+++DAK+ FDDNA FRQ+ +F
Sbjct: 197 QDAIPEAAKTIQSLYKCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVF 256
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ DP+E +A KY LN++ +DGNI +VNGAGLAMATMDIIKL+GGEPANFLD G
Sbjct: 257 SWRDPTQEDPQEAEAGKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCG 316
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G E+I +AF +I SD V I VN+FGGIV C +AKGL+ A K+F L IP+VVRL+
Sbjct: 317 GTATPETIEKAFELILSDPKVNGIFVNIFGGIVRCDYVAKGLIAATKNFNLDIPVVVRLQ 376
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+ E K ++D S L L DLD AA
Sbjct: 377 GTNMAEAKELIDNSGLKLYAFEDLDPAA 404
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F L IP+VVRL+GTN+ E K ++D S L L DLD AA +
Sbjct: 355 AKGLIAATKNFNLDIPVVVRLQGTNMAEAKELIDNSGLKLYAFEDLDPAAEKIV 408
>gi|7023369|dbj|BAA91939.1| unnamed protein product [Homo sapiens]
Length = 463
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 183/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
V PID+ +GI + A LAQK+ F
Sbjct: 203 VIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|194388002|dbj|BAG61414.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 25 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 84
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 85 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSRGGVNIEDVAAETPEA 144
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 145 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 171
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 172 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 231
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 232 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 291
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 292 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 351
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 352 GTRVDDAKALIADSGLKILACDDLDEAARMV 382
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 330 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 383
>gi|294941730|ref|XP_002783211.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239895626|gb|EER15007.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 421
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 245/390 (62%), Gaps = 34/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLI 94
A K L + V+KAQ+LAGGRG GHF +NGF+ GVH N + + KMIG+ L+
Sbjct: 57 AEQFAKALGGGDVVVKAQVLAGGRGRGHFKENGFQGGVHIVKNPIEAKDLASKMIGNTLV 116
Query: 95 TKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPH 154
TKQT + G N V +++ I E YF I+ DR GPV++ S GG IE+VAA+ P
Sbjct: 117 TKQTGEAGKICNGVFLSERFQIASEKYFAILMDRSFGGPVMVGSKYGGMSIEDVAAEHPE 176
Query: 155 LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEF 214
+ IP+D++ GI++ A+++A+ ++F+
Sbjct: 177 AIIKIPVDINSGISDGEAREMAEKIDFE-------------------------------- 204
Query: 215 RGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNI 274
G++ +A ++ L+ F D T +EINPL ET + V+ DAK+NFDDNA+FRQK+I
Sbjct: 205 -GEIVDEAVIAIKALYETFRQSDCTMVEINPLAETKDGRVMVCDAKVNFDDNAQFRQKDI 263
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
FSQ ++++ DPREV ASK++LNY+G+DGNIGC+VNGAGLAMATMD++ L GG PANFLDV
Sbjct: 264 FSQRDITQEDPREVAASKWDLNYIGLDGNIGCMVNGAGLAMATMDLLSLKGGSPANFLDV 323
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GG + + AF I+ D VK ILVN+FGGI+ C IA+G+V A + P+V+RL
Sbjct: 324 GGAAETDQVRAAFEILEKDPKVKSILVNIFGGIMRCDVIAQGVVQAMSELNMEKPIVIRL 383
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAAS 424
GTNV++GK+I+ ++ L + DL+EAA+
Sbjct: 384 VGTNVEQGKKIIKDAGLKVYAFDDLNEAAA 413
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A + P+V+RL GTNV++GK+I+ ++ L + DL+EAA
Sbjct: 363 AQGVVQAMSELNMEKPIVIRLVGTNVEQGKKIIKDAGLKVYAFDDLNEAA 412
>gi|75075886|sp|Q4R517.1|SUCB1_MACFA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=ATP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-A chain; Short=SCS-betaA; Flags:
Precursor
gi|67970932|dbj|BAE01808.1| unnamed protein product [Macaca fascicularis]
Length = 463
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 245/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+ +GI + A LAQK+ F
Sbjct: 203 IITEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA++ NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI++C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMSCDVIAQGIVTALKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIAGSGLKILACDDLDEAARMV 440
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 388 AQGIVTALKDLEIKIPVVVRLQGTRVDDAKALIAGSGLKILACDDLDEAARMVV 441
>gi|444732060|gb|ELW72383.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Tupaia chinensis]
Length = 463
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 184/391 (47%), Positives = 246/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A VQ LAQK+ F
Sbjct: 203 IVKEPIDIVEGIKKEQA--------------------VQ---------LAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 ANIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|426375419|ref|XP_004054537.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 1 [Gorilla gorilla gorilla]
Length = 463
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|294871826|ref|XP_002766061.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239866626|gb|EEQ98778.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 421
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 245/390 (62%), Gaps = 34/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLI 94
A K L + V+KAQ+LAGGRG GHF +NGF+ GVH N + + KMIG+ L+
Sbjct: 57 AEQFAKALGGGDVVVKAQVLAGGRGRGHFKENGFQGGVHIVKNPIEAKDLASKMIGNTLV 116
Query: 95 TKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPH 154
TKQT + G N V +++ I E YF I+ DR GPV++ S GG IE+VAA+ P
Sbjct: 117 TKQTGEAGKICNGVFLSERFQIASEKYFAILMDRSFGGPVMVGSKYGGMSIEDVAAEHPE 176
Query: 155 LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEF 214
+ IP+D++ GI++ A+++A+ ++F+
Sbjct: 177 AIIKIPVDINSGISDGEAREMAEKIDFE-------------------------------- 204
Query: 215 RGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNI 274
G++ +A ++ L+ F D T +EINPL ET + V+ DAK+NFDDNA+FRQK+I
Sbjct: 205 -GEIVDEAVIAIKALYETFRQSDCTMVEINPLAETKDGRVMVCDAKVNFDDNAQFRQKDI 263
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
FSQ ++++ DPREV ASK++LNY+G+DGNIGC+VNGAGLAMATMD++ L GG PANFLDV
Sbjct: 264 FSQRDITQEDPREVAASKWDLNYIGLDGNIGCMVNGAGLAMATMDLLSLKGGSPANFLDV 323
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GG + + AF I+ D VK ILVN+FGGI+ C IA+G+V A + P+V+RL
Sbjct: 324 GGAAETDQVRAAFEILEKDPKVKSILVNIFGGIMRCDVIAQGVVQAMSELNMEKPIVIRL 383
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAAS 424
GTNV++GK+I+ ++ L + DL+EAA+
Sbjct: 384 VGTNVEQGKKIIKDAGLKVYAFDDLNEAAA 413
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A + P+V+RL GTNV++GK+I+ ++ L + DL+EAA
Sbjct: 363 AQGVVQAMSELNMEKPIVIRLVGTNVEQGKKIIKDAGLKVYAFDDLNEAA 412
>gi|428169035|gb|EKX37973.1| hypothetical protein GUITHDRAFT_160086 [Guillardia theta CCMP2712]
Length = 425
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 246/400 (61%), Gaps = 36/400 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHF-TNNVQDIPPILEKMIGHKLI 94
A + K L+ VIKAQ+LAGGRGLG F NGFK GVH +I + KM+G L+
Sbjct: 57 AEQVAKSLSSDNMVIKAQVLAGGRGLGTFKNGFKGGVHVGVKTAGEIKDMASKMLGQLLV 116
Query: 95 TKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPH 154
TKQT G N V V +++ E YF I+ DR + GPV++ S GG IE++AA P
Sbjct: 117 TKQTGAAGRICNTVAVVQTIQTKSEKYFAILMDRSYGGPVIVASAKGGVTIEDIAAADPS 176
Query: 155 LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEF 214
+ P+D+ G+ A+ IA + F +K N+
Sbjct: 177 AIIKEPVDIDTGLKPGQAEAIAKKMNF----------SCEKATNM--------------- 211
Query: 215 RGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNI 274
AA +++ L++ F+ D T +E+NP ET + E++ VDAK+NFDDNAEFRQK+I
Sbjct: 212 -------AANQIKALYDTFIKCDCTMVEVNPFTETPDGEIVCVDAKVNFDDNAEFRQKDI 264
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
++ ++++ DP +V+A+K++LN++ +DGNI CLVNGAGLAMATMDIIKLHGG PANFLD+
Sbjct: 265 HARRDITQEDPLDVEAAKFDLNFINLDGNIACLVNGAGLAMATMDIIKLHGGSPANFLDL 324
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF---KLSIPLV 391
GG V ++ AFRI++SD V+ ILVN+FGGIVNCAT+A+G+V+A K +PLV
Sbjct: 325 GGSVKTPQVVAAFRILNSDPKVQGILVNIFGGIVNCATVAQGIVDAAKEVWGGSPKVPLV 384
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKS 431
VRL+G NV+ ++ S + I DLD+AA+ V A S
Sbjct: 385 VRLQGNNVEGAMELMKNSGIKCILGEDLDDAATKVVAAVS 424
>gi|311266259|ref|XP_003131022.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Sus scrofa]
Length = 463
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 183/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PSIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>gi|380789707|gb|AFE66729.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
precursor [Macaca mulatta]
gi|383412273|gb|AFH29350.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
precursor [Macaca mulatta]
gi|384940822|gb|AFI34016.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
precursor [Macaca mulatta]
Length = 463
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+ +GI + A LAQK+ F
Sbjct: 203 IITEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA++ NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIAGSGLKILACDDLDEAARMV 440
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 388 AQGIVTALKDLEIKIPVVVRLQGTRVDDAKALIAGSGLKILACDDLDEAARMVV 441
>gi|410047777|ref|XP_001151014.2| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 4 [Pan troglodytes]
Length = 502
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 122 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 181
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 182 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 241
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 242 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 268
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 269 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 328
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 329 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 388
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 389 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 448
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 449 GTRVDDAKALIADSGLKILACDDLDEAARMV 479
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 427 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 480
>gi|397480383|ref|XP_003811464.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 1 [Pan paniscus]
gi|119629182|gb|EAX08777.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_c
[Homo sapiens]
gi|189054910|dbj|BAG37894.1| unnamed protein product [Homo sapiens]
gi|261861562|dbj|BAI47303.1| succinate-CoA ligase, ADP-forming, beta subunit [synthetic
construct]
gi|311349138|gb|ADP91734.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349140|gb|ADP91735.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349142|gb|ADP91736.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349144|gb|ADP91737.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349146|gb|ADP91738.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349156|gb|ADP91743.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349162|gb|ADP91746.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349166|gb|ADP91748.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349168|gb|ADP91749.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349174|gb|ADP91752.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349176|gb|ADP91753.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349180|gb|ADP91755.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349182|gb|ADP91756.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349184|gb|ADP91757.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349186|gb|ADP91758.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349190|gb|ADP91760.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349192|gb|ADP91761.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349196|gb|ADP91763.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349198|gb|ADP91764.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349202|gb|ADP91766.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349204|gb|ADP91767.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349206|gb|ADP91768.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349208|gb|ADP91769.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349210|gb|ADP91770.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349212|gb|ADP91771.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349214|gb|ADP91772.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349216|gb|ADP91773.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|410208492|gb|JAA01465.1| succinate-CoA ligase, ADP-forming, beta subunit [Pan troglodytes]
gi|410253974|gb|JAA14954.1| succinate-CoA ligase, ADP-forming, beta subunit [Pan troglodytes]
gi|410304640|gb|JAA30920.1| succinate-CoA ligase, ADP-forming, beta subunit [Pan troglodytes]
Length = 463
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|449550696|gb|EMD41660.1| succinyl-CoA synthetase beta chain SSC-beta [Ceriporiopsis
subvermispora B]
Length = 417
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/375 (46%), Positives = 239/375 (63%), Gaps = 32/375 (8%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
VIKAQ+LAGGRG G FDNGF+ GVH + + KM+G KLITKQT G N V
Sbjct: 66 VIKAQVLAGGRGKGKFDNGFQGGVHKVESPEQAKEYAGKMLGAKLITKQTGAAGRVCNAV 125
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
M+A+ + T E Y ++ DR GPV++ S GG +IE VAAK P + T PI+ G++
Sbjct: 126 MLAERRDPTHEYYVAVLNDRATGGPVLVASAQGGMNIEEVAAKDPDAIITTPINFKNGLS 185
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ A ++A L F+G+ Q+ ++F++
Sbjct: 186 KEGALEVAKKLGFKGE------GAQQEAADIFIN-------------------------- 213
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+ +F DATQ+EINP+ ET + V+ +DAK FDDNAEFRQK++F+ ++++ +P EV
Sbjct: 214 LYKIFKDKDATQIEINPMAETADGHVLCMDAKFGFDDNAEFRQKDVFALRDITQEEPSEV 273
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+A K NLN++ +DGNIGCLVNGAGLAMATMD++ LHGG PANFLDVGGG E++ +AF
Sbjct: 274 EAQKANLNFIKLDGNIGCLVNGAGLAMATMDVLALHGGNPANFLDVGGGATPETVKKAFE 333
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
I+ +DS VK I +N+FGGI+ C IA+G++ A K +SIPL+VRL+GT E K+++ E
Sbjct: 334 ILMADSKVKSIFINIFGGIMRCDYIAEGVIKASKELSMSIPLIVRLKGTKEAEAKQMIRE 393
Query: 409 SKLPLIFASDLDEAA 423
S L +I DLDEAA
Sbjct: 394 SGLKIIPFDDLDEAA 408
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K +SIPL+VRL+GT E K+++ ES L +I DLDEAA +
Sbjct: 359 AEGVIKASKELSMSIPLIVRLKGTKEAEAKQMIRESGLKIIPFDDLDEAAEQAV 412
>gi|397480385|ref|XP_003811465.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 2 [Pan paniscus]
gi|426375421|ref|XP_004054538.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 2 [Gorilla gorilla gorilla]
gi|426375423|ref|XP_004054539.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 3 [Gorilla gorilla gorilla]
gi|119629183|gb|EAX08778.1| succinate-CoA ligase, ADP-forming, beta subunit, isoform CRA_d
[Homo sapiens]
gi|221045930|dbj|BAH14642.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 25 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 84
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 85 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 144
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 145 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 171
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 172 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 231
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 232 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 291
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 292 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 351
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 352 GTRVDDAKALIADSGLKILACDDLDEAARMV 382
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 330 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 383
>gi|345788766|ref|XP_542566.3| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Canis lupus familiaris]
Length = 405
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 25 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 84
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 85 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 144
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 145 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 171
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 172 SNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 231
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D RE A+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 232 DLQDWTQEDEREKGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 291
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 292 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 351
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 352 GTRVDDAKALITDSGLKILACDDLDEAAKMV 382
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 330 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 383
>gi|72015065|ref|XP_786753.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 452
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 182/394 (46%), Positives = 246/394 (62%), Gaps = 32/394 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A I K L + V+KAQ+LAGGRG G F +G K GV + +++ + +MIG+K
Sbjct: 68 AQRAYEIAKSLGSGDVVVKAQVLAGGRGKGAFTSGLKGGVKLAFSPEEVKDLASQMIGNK 127
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT + G N V+V + + + RE YF I +R NGPV++ S GG +IE+VAA+
Sbjct: 128 LVTKQTGEGGRICNSVLVCERMYVRREYYFAITMERAFNGPVLVGSSQGGVNIEDVAAEN 187
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + PID+ GI S A+ +A + F +AA L+N
Sbjct: 188 PEAIIKEPIDIEAGIQRSQAEKMAKLMGFPDRAVEQAAETFMNLYN-------------- 233
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
N+F+ DAT LEINPLVE E +V+ +D+KINFDDNA FRQK
Sbjct: 234 ------------------NIFIKYDATMLEINPLVEDSEGQVLCMDSKINFDDNALFRQK 275
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
I + S+ D REV A++YNLNY+G+DG+IGCLVNGAGLAM+TMDIIKLHGG PANFL
Sbjct: 276 KIHDLRDWSQEDEREVSAAEYNLNYIGLDGDIGCLVNGAGLAMSTMDIIKLHGGTPANFL 335
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG + + QAF++I+SDS V+ I+VN+FGGI+ C IA+G++ A L +P+VV
Sbjct: 336 DVGGGATADQVKQAFKLITSDSKVQAIMVNIFGGIMQCDIIAQGIIAAANELNLKVPIVV 395
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RL+GT V E K I+ S L ++ DLDEAA +V
Sbjct: 396 RLQGTMVDEAKAIIAHSDLRILACDDLDEAAKMV 429
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 432 FKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 474
L +P+VVRL+GT V E K I+ S L ++ DLDEAA +V
Sbjct: 387 LNLKVPIVVRLQGTMVDEAKAIIAHSDLRILACDDLDEAAKMV 429
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 480 FKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
L +P+VVRL+GT V E K I+ S L ++ DLDEAA +
Sbjct: 387 LNLKVPIVVRLQGTMVDEAKAIIAHSDLRILACDDLDEAAKMVV 430
>gi|195499264|ref|XP_002096876.1| GE25915 [Drosophila yakuba]
gi|194182977|gb|EDW96588.1| GE25915 [Drosophila yakuba]
Length = 503
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 254/424 (59%), Gaps = 36/424 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++ + A +I L V+KAQ+LAGGRG G F NG K GV + Q + KMI
Sbjct: 63 KNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMID 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G KVMVA+ RE YF ++ +R NGPV+I S GG DIE VAA
Sbjct: 123 QLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P + PID+ G+T A+ I + GD T VQ L N
Sbjct: 183 SSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGD---GEDTHVQMLLN------------ 227
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L++LF+ DA +EINP E ++DAK+ FDDNAEFR
Sbjct: 228 ------------------LYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +F+ + ++ DP+EV+A+KYNLNY+ +DG IGC+VNGAGLAMATMDIIKL+GGEPAN
Sbjct: 270 QKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E++ AF+II+SD V CILVN+FGGI+ C IA+G+++A K L++P+
Sbjct: 330 FLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPV 389
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL-VNACKSFKLS--IPLVVRLEGTNV 447
VVRL+GT V+E + ++ S L ++ DLD+AA L V+ + KL+ + + V E +
Sbjct: 390 VVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIPDA 449
Query: 448 QEGK 451
Q+GK
Sbjct: 450 QKGK 453
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAV 426
>gi|194903565|ref|XP_001980893.1| GG13653 [Drosophila erecta]
gi|190652596|gb|EDV49851.1| GG13653 [Drosophila erecta]
Length = 505
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 254/424 (59%), Gaps = 36/424 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++ + A +I L V+KAQ+LAGGRG G F NG K GV + Q + KMI
Sbjct: 63 KNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMID 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G KVMVA+ RE YF ++ +R NGPV+I S GG DIE VAA
Sbjct: 123 QLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P + PID+ G+T A+ I + GD T VQ L N
Sbjct: 183 SSPDAILYEPIDIGTGLTTEQAEKIVKKVGLGGD---GEDTHVQMLMN------------ 227
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L++LF+ DA +EINP E ++DAK+ FDDNAEFR
Sbjct: 228 ------------------LYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +F+ + ++ DP+EV+A+KYNLNY+ +DG IGC+VNGAGLAMATMDIIKL+GGEPAN
Sbjct: 270 QKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E++ AF+II+SD V CILVN+FGGI+ C IA+G+++A K L++P+
Sbjct: 330 FLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPV 389
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL-VNACKSFKLS--IPLVVRLEGTNV 447
VVRL+GT V+E + ++ S L ++ DLD+AA L V+ + KL+ + + V E +
Sbjct: 390 VVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIPDA 449
Query: 448 QEGK 451
Q+GK
Sbjct: 450 QKGK 453
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAV 426
>gi|3766197|gb|AAC64396.1| ATP-specific succinyl-CoA synthetase beta subunit [Homo sapiens]
Length = 426
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 46 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 105
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 106 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 165
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 166 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 192
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 193 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 252
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 253 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 312
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 313 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 372
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 373 GTRVDDAKALIADSGLKILACDDLDEAARMV 403
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 351 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 404
>gi|351709749|gb|EHB12668.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Heterocephalus glaber]
Length = 463
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/396 (45%), Positives = 246/396 (62%), Gaps = 33/396 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG
Sbjct: 78 KSADEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIG 137
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
KL TKQT + G N+V++ + RE YF I +R GPV+I S GG +IE+VAA
Sbjct: 138 KKLFTKQTGEKGRICNQVLICERKYPRREYYFAITMERAFQGPVLIGSSQGGVNIEDVAA 197
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + P+D+ +GI + A LAQK+
Sbjct: 198 ETPDAIVKEPVDIVEGIKKEQA-----------------------------IQLAQKMG- 227
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
F ++ AA + KL+NLF+ DAT +EINP+VE + V+ +DAKINFD N+ +R
Sbjct: 228 ---FPPNIVDSAAENMVKLYNLFMKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSSYR 284
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF + ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PAN
Sbjct: 285 QKKIFDLQDWTQEDERDRDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPAN 344
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+
Sbjct: 345 FLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPV 404
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
VVRL+GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 405 VVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>gi|33150622|gb|AAP97189.1|AF087890_1 beta-succinyl CoA synthetase [Homo sapiens]
Length = 403
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 23 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 82
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 83 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 142
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 143 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 169
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 170 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 229
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 230 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 289
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 290 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 349
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 350 GTRVDDAKALIADSGLKILACDDLDEAARMV 380
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 328 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 381
>gi|392597103|gb|EIW86425.1| succinyl-CoA synthetase beta chain SSC-beta [Coniophora puteana
RWD-64-598 SS2]
Length = 415
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/388 (45%), Positives = 241/388 (62%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A ++ K VIKAQ+LAGGRG GHFD+GF+ GVH ++ + KMIG KLIT
Sbjct: 53 AYSVAKSFGHSNLVIKAQVLAGGRGKGHFDSGFQGGVHKIDSPEQAQEYAGKMIGAKLIT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VM+A+ + + E Y ++ DR GPV+++S GG +IE VAAK P+
Sbjct: 113 KQTGAAGRVCNAVMLAERRDPSHEYYVAVLNDRASQGPVLVVSNQGGMNIEEVAAKDPNA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID G+++ A D+A L F S AQK
Sbjct: 173 IITTPIDFENGLSQQTALDLAKKLGF--------------------SEAAQK-------- 204
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+AA L+ +F DATQ+EINPL ET + + +DAK FDDNAEFRQ++IF
Sbjct: 205 -----EAAGIFVNLYKIFKDKDATQIEINPLAETADGRALCMDAKFGFDDNAEFRQQDIF 259
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++S+ +P EV+A K NLN++ +DG+IGCLVNGAGLAMATMD++ LHGG+PANFLDVG
Sbjct: 260 ALRDISQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLSLHGGQPANFLDVG 319
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +++ +AF I+ +D VK I +N+FGGI+ C IA+G++ A K L IPLVVRL+
Sbjct: 320 GGATPDTVKKAFEILLTDPKVKSIFINIFGGIMRCDYIAEGVIKATKELSLDIPLVVRLK 379
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT E K+++ +S L +I LDEAA
Sbjct: 380 GTKEAEAKQMIKDSGLKIIPFDGLDEAA 407
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IPLVVRL+GT E K+++ +S L +I LDEAA
Sbjct: 358 AEGVIKATKELSLDIPLVVRLKGTKEAEAKQMIKDSGLKIIPFDGLDEAA 407
>gi|392576740|gb|EIW69870.1| hypothetical protein TREMEDRAFT_43527 [Tremella mesenterica DSM
1558]
Length = 418
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 245/392 (62%), Gaps = 33/392 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A ++ K + VIKAQ+LAGGRG GHFD+GF+ GV ++ KM+GHK
Sbjct: 53 AEEAESVAKSFGKDQLVIKAQVLAGGRGKGHFDSGFQGGVQMVDSPAQAKDYASKMLGHK 112
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N VM+A+ + +E Y ++ DR PV++ S GG +IE+VA T
Sbjct: 113 LITKQTGAAGRICNAVMLAERMPPQKEYYAAVLNDRARGAPVLVTSSQGGMNIEDVAHDT 172
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T +D +GI+ + A D+A L FQ + + AAT +F
Sbjct: 173 PEAIITTTLDFEKGISHAEAVDLAKKLGFQENAQENAAT-------VF------------ 213
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
KL+ +F DATQ+EINPL E + +V+ +DAK FDDNA+FRQK
Sbjct: 214 --------------GKLYQIFKEKDATQIEINPLAELSDGQVLCMDAKFGFDDNADFRQK 259
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++F + ++ DP+EV+A++Y LN++ +DGN+GCLVNGAGLAMATMD++ LHGG PANFL
Sbjct: 260 DVFKLRDTTQEDPQEVEAAEYGLNFIKLDGNVGCLVNGAGLAMATMDVLNLHGGSPANFL 319
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +++ +AF ++ + S+VK I VN+FGGI+ C IA+G++ A K +L+IPL+V
Sbjct: 320 DVGGGATADAVKKAFELLLTSSSVKSIFVNIFGGIMRCDVIAEGIIKATKELQLNIPLIV 379
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RL+GT E K++++ES L + LDEAA+
Sbjct: 380 RLQGTKEAEAKKMINESGLKIYPFDGLDEAAA 411
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K +L+IPL+VRL+GT E K++++ES L + LDEAA
Sbjct: 361 AEGIIKATKELQLNIPLIVRLQGTKEAEAKKMINESGLKIYPFDGLDEAA 410
>gi|21263966|sp|O97580.1|SUCB1_PIG RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=ATP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-A chain; Short=SCS-betaA; Flags:
Precursor
gi|3808237|gb|AAC69751.1| ATP-specific succinyl-CoA synthetase beta subunit, partial [Sus
scrofa]
Length = 425
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 45 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 104
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 105 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 164
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 165 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 191
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 192 PSIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 251
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 252 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 311
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 312 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 371
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 372 GTRVDDAKALIADSGLKILACDDLDEAAKMV 402
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 350 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 403
>gi|384499131|gb|EIE89622.1| hypothetical protein RO3G_14333 [Rhizopus delemar RA 99-880]
Length = 438
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/388 (45%), Positives = 240/388 (61%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A +I K L + VIKAQ+LAGGRG G FDNG+K GV N ++ + EKM+GHKL+T
Sbjct: 61 AFDIAKKLGTDDLVIKAQVLAGGRGKGTFDNGYKGGVKTFNTPEEARELAEKMLGHKLVT 120
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + E YF I+ DR GPV++ S GG DIE VAA+ P
Sbjct: 121 KQTGADGKPCNAVYICERKYARNEYYFAILLDRKSAGPVIVASSQGGVDIETVAAQNPEA 180
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T+ +D G+T+ A + LAQK+ F
Sbjct: 181 IITMSVDNKVGLTKESALE-----------------------------LAQKMG----FT 207
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ +AA L+ LF DATQ+EINPL E+ + +V+ +DAK+NFDDNA+FRQK++F
Sbjct: 208 PKGQEEAAETFINLYKLFNEKDATQVEINPLSESSDNQVLCMDAKLNFDDNADFRQKDVF 267
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D RE+ A+K++LNY+G+DG+IGCLVNGAGLAMATMDII+LHGG+PANFLDVG
Sbjct: 268 DLRDFTQEDAREIAAAKHHLNYIGLDGSIGCLVNGAGLAMATMDIIQLHGGKPANFLDVG 327
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G +++ AF II+SD +V VN+FGGI+ C IA+G++ A K L IPL+VRL
Sbjct: 328 GAATPDAVKAAFEIITSDPHVTSAFVNIFGGIMRCDVIAEGIIAAAKDLDLKIPLIVRLR 387
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT V E K+++ ES L + DLD AA
Sbjct: 388 GTKVDEAKKLIAESGLRIFAVEDLDTAA 415
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L IPL+VRL GT V E K+++ ES L + DLD AA
Sbjct: 366 AEGIIAAAKDLDLKIPLIVRLRGTKVDEAKKLIAESGLRIFAVEDLDTAAQ 416
>gi|24645208|ref|NP_649846.2| skpA associated protein, isoform A [Drosophila melanogaster]
gi|161078106|ref|NP_001097713.1| skpA associated protein, isoform B [Drosophila melanogaster]
gi|23170752|gb|AAF54308.2| skpA associated protein, isoform A [Drosophila melanogaster]
gi|158030193|gb|ABW08624.1| skpA associated protein, isoform B [Drosophila melanogaster]
Length = 502
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 254/424 (59%), Gaps = 36/424 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++ + A +I L V+KAQ+LAGGRG G F NG K GV + Q + KMI
Sbjct: 63 KNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMID 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G KVMVA+ RE YF ++ +R NGPV+I S GG DIE VAA
Sbjct: 123 QLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P + PID+ G+T A+ I + GD T VQ L N
Sbjct: 183 SSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGD---GEDTHVQMLLN------------ 227
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L++LF+ DA +EINP E ++DAK+ FDDNAEFR
Sbjct: 228 ------------------LYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +F+ + ++ DP+EV+A+KYNLNY+ +DG IGC+VNGAGLAMATMDIIKL+GGEPAN
Sbjct: 270 QKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E++ AF+II+SD V CILVN+FGGI+ C IA+G+++A K L++P+
Sbjct: 330 FLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPV 389
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL-VNACKSFKLS--IPLVVRLEGTNV 447
VVRL+GT V+E + ++ S L ++ DLD+AA L V+ + KL+ + + V E +
Sbjct: 390 VVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIPDA 449
Query: 448 QEGK 451
Q+GK
Sbjct: 450 QKGK 453
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAV 426
>gi|410947378|ref|XP_003980426.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Felis catus]
Length = 463
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALITDSGLKILACDDLDEAAKMV 440
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 441
>gi|197098544|ref|NP_001124678.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Pongo abelii]
gi|55725384|emb|CAH89556.1| hypothetical protein [Pongo abelii]
gi|55731598|emb|CAH92506.1| hypothetical protein [Pongo abelii]
Length = 463
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIEEGIKKEQAL-----------------------------HLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PTIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|301767492|ref|XP_002919160.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 467
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 87 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 146
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 147 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 206
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 207 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 233
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 234 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 293
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D RE A+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 294 DLQDWTQEDERERGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 353
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 354 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 413
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 414 GTRVDDAKALITDSGLKILACDDLDEAAKMV 444
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 392 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 445
>gi|341038840|gb|EGS23832.1| succinyl-CoA synthetase beta-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 890
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/392 (44%), Positives = 241/392 (61%), Gaps = 33/392 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+A A + K++ ++ VIKAQ+LAGGRG G FDNG K GV + + E+MIGH
Sbjct: 506 NAAEAEQVAKEIGTEDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFAEQMIGH 565
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
KLITKQT G N V + + RE Y ++ DR GPV++ S GG DIE VA +
Sbjct: 566 KLITKQTGAAGRLCNAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEAVAKE 625
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
P + T ID++ G+T+ +A++IA L F Q I D
Sbjct: 626 NPEAIVTTHIDINVGVTDEIARNIATKLGFS----------------------EQCIED- 662
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
A +QKL+ +FL DATQ+EINPL ET + +V+ +DAK FDDNAEFRQ
Sbjct: 663 ----------AKNTIQKLYQIFLEKDATQIEINPLCETSDHKVMCMDAKFGFDDNAEFRQ 712
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K IFS + ++ DP EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANF
Sbjct: 713 KEIFSWRDTTQEDPEEVRAAEAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANF 772
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG +I +AF +I+SD V I VN+FGGIV C IA+GL+ +S L +P++
Sbjct: 773 LDVGGGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLITVVQSLNLKVPII 832
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ +++++S L + DL AA
Sbjct: 833 ARLQGTNMEQAHQLINDSGLKIFSIDDLQTAA 864
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ +S L +P++ RL+GTN+++ +++++S L + DL AA
Sbjct: 815 AQGLITVVQSLNLKVPIIARLQGTNMEQAHQLINDSGLKIFSIDDLQTAA 864
>gi|195330554|ref|XP_002031968.1| GM23771 [Drosophila sechellia]
gi|194120911|gb|EDW42954.1| GM23771 [Drosophila sechellia]
Length = 502
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 254/424 (59%), Gaps = 36/424 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++ + A +I L V+KAQ+LAGGRG G F NG K GV + Q + KMI
Sbjct: 63 KNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSGKMID 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G KVMVA+ RE YF ++ +R NGPV+I S GG DIE VAA
Sbjct: 123 QLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P + PID+ G+T A+ I + GD T VQ L N
Sbjct: 183 SSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGD---GEDTHVQMLLN------------ 227
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L++LF+ DA +EINP E ++DAK+ FDDNAEFR
Sbjct: 228 ------------------LYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +F+ + ++ DP+EV+A+KYNLNY+ +DG IGC+VNGAGLAMATMDIIKL+GGEPAN
Sbjct: 270 QKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E++ AF+II+SD V CILVN+FGGI+ C IA+G+++A K L++P+
Sbjct: 330 FLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPV 389
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL-VNACKSFKLS--IPLVVRLEGTNV 447
VVRL+GT V+E + ++ S L ++ DLD+AA L V+ + KL+ + + V E +
Sbjct: 390 VVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIPDA 449
Query: 448 QEGK 451
Q+GK
Sbjct: 450 QKGK 453
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAV 426
>gi|409051378|gb|EKM60854.1| hypothetical protein PHACADRAFT_247047 [Phanerochaete carnosa
HHB-10118-sp]
Length = 417
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/394 (45%), Positives = 244/394 (61%), Gaps = 35/394 (8%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A N K+L+ VIKAQ+LAGGRG G FDNG + GVH N + + KM+
Sbjct: 47 ARTVDEAYNAAKELSSTGSVIKAQVLAGGRGKGTFDNGLQGGVHIVQNPEQAKELASKML 106
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G KLITKQT G N VM+A+ + E Y I+ DR GPV++ S GG +IE VA
Sbjct: 107 GAKLITKQTGAQGRICNTVMLAERRDAKHEYYVAILNDRGVGGPVLVASAQGGMNIEEVA 166
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
AK P + T PID +G+++ A DIA L F+ + A ++ F++
Sbjct: 167 AKDPSAIITTPIDFDKGLSKREALDIAKKLGFKSEGAQSEAADI------FIN------- 213
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ ++ DATQ+EINPL ET + V+ +DAK FDDNAEF
Sbjct: 214 -------------------LYKVYKDKDATQIEINPLGETADGHVLCMDAKFGFDDNAEF 254
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK++F+ ++++ +P EV+A K NLN++ +DG+IGCLVNGAGLAMATMD++ LHGG PA
Sbjct: 255 RQKDVFALRDITQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLALHGGNPA 314
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG E++ +AF I+S+D VK I +N+FGGI+ C IA+G++NA K ++IP
Sbjct: 315 NFLDVGGGATPETVKKAFEILSADPKVKSIFINIFGGIMRCDYIAEGVINAAKELNMNIP 374
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LVVRL+GT E K ++ ES L + LDEAA
Sbjct: 375 LVVRLKGTKEAEAKAMIKESGLKIDAHDSLDEAA 408
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++NA K ++IPLVVRL+GT E K ++ ES L + LDEAA +
Sbjct: 359 AEGVINAAKELNMNIPLVVRLKGTKEAEAKAMIKESGLKIDAHDSLDEAAEQAV 412
>gi|395848156|ref|XP_003796725.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Otolemur garnettii]
Length = 463
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 245/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KLIT
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLIT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A ++A + F
Sbjct: 203 IVKEPIDIVEGIKKEQAL---------------------------------RLAQNMGFP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP++E + V+ +DAKINFD N+ FRQK IF
Sbjct: 230 SNIVDSAAENMVKLYDLFLKYDATMVEINPMIEDSDGAVLCMDAKINFDANSAFRQKEIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 ALQDWTQEDERDKDAAKAHLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVRQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|348583202|ref|XP_003477362.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Cavia porcellus]
Length = 465
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/394 (46%), Positives = 246/394 (62%), Gaps = 33/394 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG K
Sbjct: 82 ADEAYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKK 141
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQT G N+V++ + RE YF I +R GPV+I S GG +IE+VAA+T
Sbjct: 142 LFTKQTGAKGRICNQVLICERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAET 201
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + P+D+ +GI + A VQ LA K+
Sbjct: 202 PDAIVKEPVDIVEGIKKEQA--------------------VQ---------LATKMG--- 229
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F ++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK
Sbjct: 230 -FPANIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQK 288
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
IF + ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFL
Sbjct: 289 KIFDLQDWTQEDERDRDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFL 348
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG + + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VV
Sbjct: 349 DVGGGATVQQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVV 408
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RL+GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 409 RLQGTRVDDAKALIADSGLKILACDDLDEAAKMV 442
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 390 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 443
>gi|406603764|emb|CCH44789.1| Succinyl-CoA ligase subunit beta [Wickerhamomyces ciferrii]
Length = 455
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/391 (45%), Positives = 245/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K LN ++ VIKAQ L GGRG GHFD GF+ GV ++ + I + ++ + +K+IT
Sbjct: 75 AYEIAKKLNTEDLVIKAQALTGGRGKGHFDTGFQGGVKLVDSPEKIRDLAKEFLHNKIIT 134
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V V V + E Y I+ DR P+++ S GG DIE VAAK P
Sbjct: 135 KQTGPAGKEVTAVYVVERAFDRTEAYLAILLDRATQKPMIVASAQGGMDIEGVAAKDPSA 194
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+KT P+D+ G+T++ A++IA L F K A E
Sbjct: 195 IKTFPVDLEAGVTDAQAKEIASVLGF-----TKHAQE----------------------- 226
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+AA+ VQKL+ +F D+TQ+EINPL ET + +V+++DAK FDDNA +RQ+ +F
Sbjct: 227 -----EAASTVQKLYKIFKERDSTQIEINPLSETIDHKVLAMDAKFGFDDNASYRQEEVF 281
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S ++++ DP EV A+K NLN++ +DGNIGCLVNGAGLAMATMD+IKL+GG+PANFLD G
Sbjct: 282 SWRDLTQEDPDEVIAAKSNLNFIKLDGNIGCLVNGAGLAMATMDVIKLYGGDPANFLDCG 341
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E+I AF++I SD V I VN+FGGIV C +A+GL+ A K+ + +P+VVRL+
Sbjct: 342 GGATPETIENAFKLILSDKKVSGIFVNIFGGIVRCDYVAEGLIAATKNLGVEVPIVVRLQ 401
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GTN ++ ++ ES L + ++LDEAA V
Sbjct: 402 GTNYEKASELIAESGLKIYAVNELDEAAEKV 432
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ A K+ + +P+VVRL+GTN ++ ++ ES L + ++LDEAA
Sbjct: 380 AEGLIAATKNLGVEVPIVVRLQGTNYEKASELIAESGLKIYAVNELDEAA 429
>gi|11321583|ref|NP_003841.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
precursor [Homo sapiens]
gi|94730427|sp|Q9P2R7.3|SUCB1_HUMAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=ATP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Renal carcinoma
antigen NY-REN-39; AltName: Full=Succinyl-CoA synthetase
beta-A chain; Short=SCS-betaA; Flags: Precursor
gi|7328935|dbj|BAA92873.1| ATP specific succinyl CoA synthetase beta subunit precursor [Homo
sapiens]
gi|20380655|gb|AAH27587.1| Succinate-CoA ligase, ADP-forming, beta subunit [Homo sapiens]
gi|311349148|gb|ADP91739.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349150|gb|ADP91740.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349152|gb|ADP91741.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349154|gb|ADP91742.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349158|gb|ADP91744.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349160|gb|ADP91745.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349164|gb|ADP91747.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349170|gb|ADP91750.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349172|gb|ADP91751.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349178|gb|ADP91754.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349188|gb|ADP91759.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349194|gb|ADP91762.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
gi|311349200|gb|ADP91765.1| mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta [Homo
sapiens]
Length = 463
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA++P
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|395516458|ref|XP_003762405.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial [Sarcophilus harrisii]
Length = 413
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/391 (47%), Positives = 247/391 (63%), Gaps = 43/391 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG
Sbjct: 54 DTANDALEAAKRLNAKEIVLKAQILAGGRGKGTFNSGLKGGVHLTKDPKVVGQLAQQMIG 113
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQT K G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 114 YNLATKQTSKDGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAA 173
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
TP L+ K + V LF +S+ Q
Sbjct: 174 TTPELI----------------------------FKWRTTHGVL----LFQASVDQV--- 198
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
FLE+ + + + L + + QL LV DAKINFDDNAEFR
Sbjct: 199 FLEWGSPVISSSLGCAIPLVQMSQHASSQQLHQTTLV--------CFDAKINFDDNAEFR 250
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 251 QKDIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPAN 310
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L IPL
Sbjct: 311 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKIPL 370
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
VVRLEGTNVQE + IL+ S LP+ A+DL++
Sbjct: 371 VVRLEGTNVQEAQNILNNSGLPITSANDLED 401
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L IPLVVRLEGTNVQE + IL+ S LP+ A+DL++
Sbjct: 354 ANGITRACRELELKIPLVVRLEGTNVQEAQNILNNSGLPITSANDLED 401
>gi|281349742|gb|EFB25326.1| hypothetical protein PANDA_007758 [Ailuropoda melanoleuca]
Length = 413
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/392 (46%), Positives = 244/392 (62%), Gaps = 33/392 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 53 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 113 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 173 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 199
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 200 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGTVLCMDAKINFDSNSAYRQKKIF 259
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D RE A+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 260 DLQDWTQEDERERGAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 319
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 320 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 379
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
GT V + K ++ +S L ++ DLDEAA +V+
Sbjct: 380 GTRVDDAKALITDSGLKILACDDLDEAAKMVS 411
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA
Sbjct: 358 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAA 407
>gi|7022728|dbj|BAA91703.1| unnamed protein product [Homo sapiens]
Length = 441
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 61 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 120
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 121 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 180
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 181 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 207
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 208 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 267
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLV+GAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 268 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVSGAGLAMATMDIIKLHGGTPANFLDVG 327
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 328 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 387
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 388 GTRVDDAKALIADSGLKILACDDLDEAARMV 418
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 366 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 419
>gi|195572423|ref|XP_002104195.1| GD18581 [Drosophila simulans]
gi|194200122|gb|EDX13698.1| GD18581 [Drosophila simulans]
Length = 507
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 255/424 (60%), Gaps = 36/424 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++ + A +I L V+KAQ+LAGGRG G F NG K GV + Q + KMI
Sbjct: 68 KNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSGKMID 127
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G KVMVA+ RE YF ++ +R NGPV+I S GG DIE VAA
Sbjct: 128 QLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAA 187
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P + PID+ G+T A+ I + GD + T VQ L NL+
Sbjct: 188 SSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGDGE---DTHVQMLLNLY---------- 234
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+LF+ DA +EINP E ++DAK+ FDDNAEFR
Sbjct: 235 --------------------DLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFR 274
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +F+ + ++ DP+EV+A+KYNLNY+ +DG IGC+VNGAGLAMATMDIIKL+GGEPAN
Sbjct: 275 QKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPAN 334
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E++ AF+II+SD V CILVN+FGGI+ C IA+G+++A K L++P+
Sbjct: 335 FLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPV 394
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL-VNACKSFKLS--IPLVVRLEGTNV 447
VVRL+GT V+E + ++ S L ++ DLD+AA L V+ + KL+ + + V E +
Sbjct: 395 VVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIPDA 454
Query: 448 QEGK 451
Q+GK
Sbjct: 455 QKGK 458
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 378 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAV 431
>gi|9789854|sp|P53587.2|SUCB_NEOFR RecName: Full=Succinyl-CoA ligase [GDP-forming] subunit beta,
hydrogenosomal; AltName: Full=Succinyl-CoA synthetase
beta chain; Short=SCS-beta; Flags: Precursor
gi|4688953|emb|CAB41451.1| beta-succinyl CoA synthetase precursor [Neocallimastix frontalis]
Length = 437
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/392 (45%), Positives = 234/392 (59%), Gaps = 34/392 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K LN ++ VIKAQ+LAGGRG GHFD+G + GV + + KM+GHKLIT
Sbjct: 58 AYQAAKKLNTEDLVIKAQVLAGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLIT 117
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G + N V V + RE YF I+ DR GPV++ S GG +IE VA P
Sbjct: 118 KQTGAAGRDCNAVYVVERQYAAREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDA 177
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T+P + G+T +A D A + F TE
Sbjct: 178 ILTVPFSIKTGLTREVALDTAKKMGF---------TE----------------------- 205
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+AA KL+ +F+ DAT +EINP+ E + EV+ +DAK FDDNA ++ K IF
Sbjct: 206 -KCVPQAADTFMKLYKIFIEKDATMVEINPMAENNRGEVVCMDAKFGFDDNASYKPKGIF 264
Query: 276 SQNEVSESDPREVDA-SKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
+ + ++ DPREV +K+NLNYVGM+GNIGCLVNGAGLAMATMDIIKL+GG PANFLDV
Sbjct: 265 ALRDTTQEDPREVAGHAKWNLNYVGMEGNIGCLVNGAGLAMATMDIIKLNGGVPANFLDV 324
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GG + + +AF+IISSD V ILVN+FGGI+ C +A+G++ A K L IPLVVRL
Sbjct: 325 GGSATAKQVKEAFKIISSDKAVSAILVNIFGGIMRCDIVAEGVIQAVKELGLDIPLVVRL 384
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+GT V+E + ++ S L L DLD+AA V
Sbjct: 385 QGTKVEEARELIKNSNLSLYAIDDLDKAAKKV 416
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L IPLVVRL+GT V+E + ++ S L L DLD+AA +
Sbjct: 364 AEGVIQAVKELGLDIPLVVRLQGTKVEEARELIKNSNLSLYAIDDLDKAAKKVV 417
>gi|391336027|ref|XP_003742385.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Metaseiulus occidentalis]
Length = 438
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 244/393 (62%), Gaps = 35/393 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A I + L K++VIKA +L GGRG GHFD+G K GV ++ + +MIGHK
Sbjct: 57 ALEARKIAESLKAKDFVIKALVLTGGRGKGHFDSGLKGGVRTVFTPEEAEKLSAQMIGHK 116
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT + GI VNKVMV++ + RE YF I+ +R NGP+++ S GG +IE VA +
Sbjct: 117 LITKQTGEKGILVNKVMVSERLYNRREYYFAIMMERSVNGPMIVASSQGGVNIEEVAKEN 176
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T+P+ GI + +D L F+G SL +
Sbjct: 177 PDAILTLPL--KYGIKKDEVRDFCHRLGFEG------------------QSLEE------ 210
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A V+KL+++F DAT +EINP+VE + V +DAK FDDNAE+RQK
Sbjct: 211 ---------AVVMVEKLYDVFCKYDATMIEINPMVEDNNGTVYCLDAKCRFDDNAEYRQK 261
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + + DPRE A+ NLN++ +DG+IGCLVNGAGLAMATMDIIKLHGG PANFL
Sbjct: 262 VLFGLRDWGQQDPREKQAADSNLNFIPLDGDIGCLVNGAGLAMATMDIIKLHGGSPANFL 321
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G++ A ++ +L IP+V
Sbjct: 322 DVGGGATAQQVTEAFKLITSDEKVQAILVNIFGGIMRCDVIAEGVIKAAETLQLRIPIVC 381
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
RL+GT V + K ++ SKL +I +LDEAA +
Sbjct: 382 RLQGTQVDDAKALIAASKLKIIACDNLDEAAKM 414
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A ++ +L IP+V RL+GT V + K ++ SKL +I +LDEAA +
Sbjct: 363 AEGVIKAAETLQLRIPIVCRLQGTQVDDAKALIAASKLKIIACDNLDEAAKMAV 416
>gi|70982219|ref|XP_746638.1| succinyl-CoA synthetase beta subunit [Aspergillus fumigatus Af293]
gi|66844261|gb|EAL84600.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
fumigatus Af293]
gi|159122127|gb|EDP47249.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
fumigatus A1163]
Length = 444
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 234/391 (59%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K + + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 61 AEEAEAVAKSIGNDDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFASQMIGHK 120
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR PV++ S GG DIE VA +
Sbjct: 121 LITKQTGAAGRLCNAVYICERKFARREFYLAVLMDRATQTPVIVASSQGGMDIEAVAKEH 180
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+ G+T+ +A+ IA L F A T +Q L+ +F+
Sbjct: 181 PEAIMTTPIDIKVGVTDDIARKIATDLGFSEQCIEDAKTTIQNLYKVFMEK--------- 231
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
DATQ+EINPL ET + +V+++DAK+NFDDNAEFRQK
Sbjct: 232 ------------------------DATQIEINPLSETSDHQVLAMDAKLNFDDNAEFRQK 267
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ D EV A++Y LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 268 EVFSWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFL 327
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L IP+V
Sbjct: 328 DVGGGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIARGLINVVEDMGLRIPIVA 387
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ +++++ES L + DL AA
Sbjct: 388 RLQGTNMEQAQKLINESGLKIFSIEDLQSAA 418
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L IP+V RL+GTN+++ +++++ES L + DL AA
Sbjct: 369 ARGLINVVEDMGLRIPIVARLQGTNMEQAQKLINESGLKIFSIEDLQSAA 418
>gi|119486728|ref|XP_001262350.1| succinyl-CoA synthetase beta subunit, putative [Neosartorya
fischeri NRRL 181]
gi|119410507|gb|EAW20453.1| succinyl-CoA synthetase beta subunit, putative [Neosartorya
fischeri NRRL 181]
Length = 444
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/391 (44%), Positives = 234/391 (59%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K + + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 61 AAEAEAVAKSIGNDDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFASQMIGHK 120
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR PV++ S GG DIE VA +
Sbjct: 121 LITKQTGAAGRLCNAVYICERKFARREFYLAVLMDRATQSPVIVASSQGGMDIEAVAKEH 180
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T P+D+ G+T+ +A+ IA L F A T +Q L+ +F+
Sbjct: 181 PEAIMTTPVDIKVGVTDDIARKIATDLGFSEQCIEDAKTTIQNLYKVFMEK--------- 231
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
DATQ+EINPL ET + +V+++DAK+NFDDNAEFRQK
Sbjct: 232 ------------------------DATQIEINPLSETSDHQVLAMDAKLNFDDNAEFRQK 267
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ D EV A++Y LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 268 EVFSWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFL 327
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L IP+V
Sbjct: 328 DVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIARGLINVVEDMGLRIPIVA 387
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ +++++ES L + DL AA
Sbjct: 388 RLQGTNMEQAQKLINESGLKIFSIEDLQSAA 418
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L IP+V RL+GTN+++ +++++ES L + DL AA
Sbjct: 369 ARGLINVVEDMGLRIPIVARLQGTNMEQAQKLINESGLKIFSIEDLQSAA 418
>gi|440895016|gb|ELR47317.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial,
partial [Bos grunniens mutus]
Length = 464
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 84 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 143
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 144 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 203
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 204 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 230
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 231 ASIVDSAAENMIKLYDLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 290
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 291 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 350
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 351 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 410
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 411 GTRVDDAKALIADSGLKILACDDLDEAAKMV 441
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 389 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 442
>gi|402901972|ref|XP_003913905.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 1 [Papio anubis]
Length = 463
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA++ NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIAGSGLKILACDDLDEAARMV 440
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 388 AQGIVTALKDLEIKIPVVVRLQGTRVDDAKALIAGSGLKILACDDLDEAARMVV 441
>gi|290982641|ref|XP_002674038.1| succinyl-CoA synthetase beta sub-unit [Naegleria gruberi]
gi|284087626|gb|EFC41294.1| succinyl-CoA synthetase beta sub-unit [Naegleria gruberi]
Length = 430
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 185/385 (48%), Positives = 242/385 (62%), Gaps = 42/385 (10%)
Query: 46 KEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
K +++K+QILAGGRG G F +NGF+ GV FT N Q + KM+G+ L+TKQT + GI
Sbjct: 73 KNFIVKSQILAGGRGKGSFIENGFQGGVKFTKNEQVAADVASKMLGNTLVTKQTGEKGIK 132
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPI-DV 163
V+K+ A+ ++ RE YF I+ DR PV + S GG DIE VA + P +KT+ I D+
Sbjct: 133 VDKLFFAECLDFNREFYFAILLDRAAQCPVFVGSYEGGMDIEQVAEEKPEAIKTLLIRDL 192
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
G T +AD E+ +L+ K + AA
Sbjct: 193 ENGPT------LADATEYAKELQFKKPEQ-----------------------------AA 217
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVIS-VDAKINFDDNAEFRQKNIFSQNEVSE 282
++KL+ +F DA QLEINPLVE D +S VD K+N DDNA FRQ NIF+ + +
Sbjct: 218 QIMKKLYTMFRKTDAAQLEINPLVELDNTADLSCVDCKLNIDDNAAFRQANIFAMRDWAA 277
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DPREV+A+K LNY+G+DGNIGCLVNGAGLAMATMDII+LHGG PANFLDVGGG
Sbjct: 278 EDPREVEAAKCELNYIGLDGNIGCLVNGAGLAMATMDIIQLHGGAPANFLDVGGGATTNQ 337
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
+ QAF II D +VKC+LVN+FGGI+ C IA+G+V A + + IP+VVRL GTNV +G
Sbjct: 338 VKQAFTIILKDESVKCVLVNIFGGIMRCDVIAEGIVQAARELGVRIPIVVRLAGTNVDKG 397
Query: 403 KRILDES----KLPLIFASDLDEAA 423
+IL+E+ L +I A DLD+AA
Sbjct: 398 LQILEEAAKTGTLKVIAAKDLDDAA 422
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDES----KLPLIFASDLDEAA 519
A +V A + + IP+VVRL GTNV +G +IL+E+ L +I A DLD+AA
Sbjct: 369 AEGIVQAARELGVRIPIVVRLAGTNVDKGLQILEEAAKTGTLKVIAAKDLDDAA 422
>gi|34364605|emb|CAE45708.1| hypothetical protein [Homo sapiens]
Length = 472
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 92 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 151
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA++P
Sbjct: 152 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEA 211
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 212 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 238
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 239 PYIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 298
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 299 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 358
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 359 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 418
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 419 GTRVDDAKALIADSGLKILACDDLDEAARMV 449
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 397 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 450
>gi|402901974|ref|XP_003913906.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 2 [Papio anubis]
Length = 405
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 25 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 84
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 85 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 144
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 145 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 171
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 172 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 231
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA++ NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 232 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 291
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 292 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 351
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 352 GTRVDDAKALIAGSGLKILACDDLDEAARMV 382
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 330 AQGIVTALKDLEIKIPVVVRLQGTRVDDAKALIAGSGLKILACDDLDEAARMVV 383
>gi|296481810|tpg|DAA23925.1| TPA: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Bos taurus]
Length = 463
Score = 338 bits (866), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 ASIVDSAAENMIKLYDLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>gi|259483689|tpe|CBF79284.1| TPA: succinyl-CoA synthetase beta subunit, putative
(AFU_orthologue; AFUA_4G04520) [Aspergillus nidulans
FGSC A4]
Length = 440
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/391 (44%), Positives = 237/391 (60%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG GHFDNG K GV + + +MIGHK
Sbjct: 57 AEEAEKVAKSLGNDDMVIKAQVLAGGRGKGHFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 116
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR GPV++ S GG DIE VA +
Sbjct: 117 LITKQTGAGGRLCNAVFIVERKFARREFYLAVLMDRKTQGPVIVASSQGGMDIEAVAKEN 176
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID++ G+T+++A IA+ L F +++ D
Sbjct: 177 PDAIITTPIDINVGVTDAIATKIANELGF-----------------------SEQCVD-- 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +Q L+ F+ DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 212 --------DAKKTIQNLYKAFMETDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQK 263
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
IFS + ++ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 264 EIFSWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFL 323
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P+V
Sbjct: 324 DVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVQEMGLRTPIVA 383
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ ++++ES L + DL AA
Sbjct: 384 RLQGTNMEQAHKLINESGLKIFSIEDLQSAA 414
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ ++++ES L + DL AA
Sbjct: 365 AQGLINVVQEMGLRTPIVARLQGTNMEQAHKLINESGLKIFSIEDLQSAA 414
>gi|449019796|dbj|BAM83198.1| succinate--CoA ligase, mitochondrial precursor [Cyanidioschyzon
merolae strain 10D]
Length = 461
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 174/378 (46%), Positives = 242/378 (64%), Gaps = 27/378 (7%)
Query: 47 EYVIKAQILAGGRGLGHFD-NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+ V+KAQ+LAGGRGLG F +GF+ GVH + V ++ + KM+G +L+TKQT G
Sbjct: 81 DVVLKAQVLAGGRGLGVFQPSGFRGGVHIASTVDEVQQLAGKMLGQQLVTKQTGAKGRPC 140
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
K++VAK V RE Y ++ DR GP+ I S GGT IE++A TP +++IP+
Sbjct: 141 QKLLVAKRVYARREMYLALLYDRKVQGPLAIASRRGGTSIEDIARDTPESIQSIPLP--- 197
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
L +G+ AT + +L LS + L
Sbjct: 198 -------------LPKRGE-TMDTATAARIAESLGLSRQRSE---------RLHEDGVAL 234
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+Q L+ LFL D T +E+NPL ET + E+ VDAKINFDDNA FRQ++IF+ + ++ D
Sbjct: 235 IQNLYRLFLEKDCTMVEVNPLTETPDGEIHCVDAKINFDDNAAFRQRDIFALRDTTQEDS 294
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REVDAS++ LNY+G+DGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVGGG E + +
Sbjct: 295 REVDASRFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLYGGNPANFLDVGGGATVEQVGE 354
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AFRI++ D++V IL+N+FGGI+ C +A+G+V+A K ++ +PL+VRLEG V E K I
Sbjct: 355 AFRILNQDAHVDSILINIFGGIMRCDVLAQGIVDAAKRAQVRVPLIVRLEGNKVAEAKEI 414
Query: 406 LDESKLPLIFASDLDEAA 423
+ +S + +I A +LDEAA
Sbjct: 415 MRQSTVRIIPADNLDEAA 432
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V+A K ++ +PL+VRLEG V E K I+ +S + +I A +LDEAA +
Sbjct: 383 AQGIVDAAKRAQVRVPLIVRLEGNKVAEAKEIMRQSTVRIIPADNLDEAAQRAV 436
>gi|346471807|gb|AEO35748.1| hypothetical protein [Amblyomma maculatum]
Length = 447
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/391 (44%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I + L + VIKA +LAGGRG G FD+G K GV + + + +MIG+ L T
Sbjct: 67 AEEIAQRLGTPDVVIKALVLAGGRGKGTFDSGLKGGVKMAFSPSEAKKLAAQMIGYTLRT 126
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + GI V+KVMV + + RE YF ++ +R +NGPV++ S GG +IE VA + P
Sbjct: 127 KQTGERGIRVDKVMVTERLYNRREYYFALMMEREYNGPVIVASSQGGVNIEEVAKENPEA 186
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +PID+ QGI + ++ L F AA +
Sbjct: 187 ILKLPIDITQGIDRARTAELVQGLGFH-----PAAVD----------------------- 218
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A + ++ L+N+FL DAT LEINPL+E + +V +DAK FDDNA FRQK +F
Sbjct: 219 -----GAVSLIENLYNVFLKYDATLLEINPLIEDNNNKVYCLDAKCRFDDNAAFRQKELF 273
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D RE +A + NLNY+ +DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 274 DLRDWAQQDLREKEAHESNLNYIALDGDIGCLVNGAGLAMATMDIIKLHGGSPANFLDVG 333
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AFR+I+SD V+ ILVN+FGGI+ C IA+G++ A ++ L IP+VVRL+
Sbjct: 334 GGATAKQVTEAFRLITSDQKVQAILVNIFGGIMRCDIIAEGVIQAAETLDLKIPIVVRLQ 393
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V E K ++ SKL ++ +LDEAA +V
Sbjct: 394 GTQVDEAKALIATSKLKILACDNLDEAAKMV 424
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A ++ L IP+VVRL+GT V E K ++ SKL ++ +LDEAA +
Sbjct: 372 AEGVIQAAETLDLKIPIVVRLQGTQVDEAKALIATSKLKILACDNLDEAAKMVV 425
>gi|291408934|ref|XP_002720765.1| PREDICTED: succinate-CoA ligase, ADP-forming, beta subunit
[Oryctolagus cuniculus]
Length = 463
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V++ + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLICERKYPRREYYFAIAMERSFQGPVLIGSSQGGVNIEDVAAETPDA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVDSAAENMVKLFNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|157130276|ref|XP_001661866.1| succinyl-coa synthetase beta chain [Aedes aegypti]
gi|108871926|gb|EAT36151.1| AAEL011746-PB [Aedes aegypti]
Length = 446
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 182/393 (46%), Positives = 249/393 (63%), Gaps = 34/393 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A I K LN K V+KAQ+LAGGRG G F NG K GV + Q+ I KMI
Sbjct: 60 AQDAEKIAKGLNTKNLVLKAQVLAGGRGKGTFKNGLKGGVRVVFSPQEARDISGKMIKQL 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT G N VMVA+ RE YF ++ +R NGPV+I S GG +IE VAA+
Sbjct: 120 LVTKQTGAAGRICNSVMVAERKFPRREFYFAVMMERAFNGPVLIASSQGGVNIEEVAAEN 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + PID+ G+ + AQ +A +A+K+ L
Sbjct: 180 PDAIVYEPIDIKAGLQK--AQALA---------------------------IAKKVG--L 208
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
E D + A + +++LF+ DA +EINP E ++DAK+ FDDNAEFRQK
Sbjct: 209 E---DHAEETAKMLLNMYDLFVKKDALLIEINPYAEDAGETYFALDAKMRFDDNAEFRQK 265
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++F++ ++S+ D +EV+ASK++LNY+ +DG+IGCLVNGAGLAMATMDIIKLHGG+PANFL
Sbjct: 266 DLFAKRDLSQEDSKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPANFL 325
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG + +++ +AFRII+SD V ILVN+FGGI+ C IA+G++ A K + +P++V
Sbjct: 326 DVGGGASVKAVKEAFRIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMPIIV 385
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
RL+GTNV E K ++ +SKL ++ DLDEAA L
Sbjct: 386 RLQGTNVNEAKELIKKSKLRILPKDDLDEAAML 418
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K + +P++VRL+GTNV E K ++ +SKL ++ DLDEAA
Sbjct: 367 AEGIIQATKELNIKMPIIVRLQGTNVNEAKELIKKSKLRILPKDDLDEAA 416
>gi|378734135|gb|EHY60594.1| succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Exophiala dermatitidis NIH/UT8656]
Length = 441
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 182/411 (44%), Positives = 248/411 (60%), Gaps = 34/411 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K + + VIKAQ+LAGGRG G FDNG K GV + + E+MIGHKL T
Sbjct: 61 AEAVAKKIAGDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLFT 120
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + RE Y ++ DR PV++ S GG DIE VA +TP
Sbjct: 121 KQTGSRGRICNSVYICERKFARREFYLAVLMDRSTQSPVIVASSQGGMDIETVAKETPDA 180
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID++ G+T+ + ++IA L F Q I D
Sbjct: 181 IITTPIDINVGVTDEIGRNIATELGFS----------------------EQCIED----- 213
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A +QKL+ +F+ DATQ+EINPL ET + +V+ +DAK+NFDDNAEFRQK IF
Sbjct: 214 ------AKNTIQKLYQVFMEKDATQIEINPLSETSDHQVLCMDAKLNFDDNAEFRQKEIF 267
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + S+ DP EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 268 SWRDTSQEDPDEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 327
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E+I AF +I++D V I VN+FGGIV C IA GL++ + L +P+V RL+
Sbjct: 328 GGATPEAIRSAFELITNDPKVTAIFVNIFGGIVRCDAIASGLIHVVQQMNLRLPIVCRLQ 387
Query: 396 GTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKSFKLSIPLVVRLEGT 445
GTN+++ +++ S L + +DL D AA V+ K K++ + V +E T
Sbjct: 388 GTNMEKAAELVNNSGLKIFSITDLQDAAAKAVDFSKIVKMARDIDVGVEFT 438
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ L++ + L +P+V RL+GTN+++ +++ S L + +DL +AA
Sbjct: 366 ASGLIHVVQQMNLRLPIVCRLQGTNMEKAAELVNNSGLKIFSITDLQDAA 415
>gi|46849708|ref|NP_035636.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
precursor [Mus musculus]
gi|52788305|sp|Q9Z2I9.2|SUCB1_MOUSE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=ATP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-A chain; Short=SCS-betaA; Flags:
Precursor
gi|26349481|dbj|BAC38380.1| unnamed protein product [Mus musculus]
gi|26353900|dbj|BAC40580.1| unnamed protein product [Mus musculus]
gi|33989905|gb|AAH56353.1| Succinate-Coenzyme A ligase, ADP-forming, beta subunit [Mus
musculus]
gi|35505380|gb|AAH57605.1| Succinate-Coenzyme A ligase, ADP-forming, beta subunit [Mus
musculus]
gi|74141275|dbj|BAE35942.1| unnamed protein product [Mus musculus]
gi|74210138|dbj|BAE21343.1| unnamed protein product [Mus musculus]
gi|74226090|dbj|BAE35647.1| unnamed protein product [Mus musculus]
Length = 463
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 247/391 (63%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F +G K GV + ++ + +MIG KLIT
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI K +A T LAQK+ F
Sbjct: 203 IVKEPIDIVEGIK-----------------KEQAVT------------LAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + +V+ +DAKINFD N+ +RQK IF
Sbjct: 230 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ D R+ +A+ ++NY+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>gi|442618106|ref|NP_001189198.2| skpA associated protein, isoform G [Drosophila melanogaster]
gi|442618108|ref|NP_001189197.2| skpA associated protein, isoform H [Drosophila melanogaster]
gi|440217222|gb|ADV37289.2| skpA associated protein, isoform G [Drosophila melanogaster]
gi|440217223|gb|ADV37288.2| skpA associated protein, isoform H [Drosophila melanogaster]
Length = 451
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 179/395 (45%), Positives = 239/395 (60%), Gaps = 33/395 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++ + A +I L V+KAQ+LAGGRG G F NG K GV + Q + KMI
Sbjct: 63 KNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMID 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G KVMVA+ RE YF ++ +R NGPV+I S GG DIE VAA
Sbjct: 123 QLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P + PID+ G+T A+ I + GD T VQ L N
Sbjct: 183 SSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGD---GEDTHVQMLLN------------ 227
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L++LF+ DA +EINP E ++DAK+ FDDNAEFR
Sbjct: 228 ------------------LYDLFVKKDALLVEINPYAEDAMSGFFALDAKLRFDDNAEFR 269
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +F+ + ++ DP+EV+A+KYNLNY+ +DG IGC+VNGAGLAMATMDIIKL+GGEPAN
Sbjct: 270 QKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPAN 329
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E++ AF+II+SD V CILVN+FGGI+ C IA+G+++A K L++P+
Sbjct: 330 FLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMPV 389
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
VVRL+GT V+E + ++ S L ++ DLD+AA L
Sbjct: 390 VVRLQGTKVKEARELIRTSGLKILARDDLDKAADL 424
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAV 426
>gi|260945463|ref|XP_002617029.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238848883|gb|EEQ38347.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 425
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 175/383 (45%), Positives = 237/383 (61%), Gaps = 33/383 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K L E VIKAQ L GGRG GHFDNGF+ GV ++ ++ + KM+ HKLITKQT
Sbjct: 66 KSLGTNELVIKAQALTGGRGKGHFDNGFQGGVKLISSPEEAKDLAGKMLHHKLITKQTGA 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V V + + + E Y I+ DR P+++ S GG DIE VAAK P +KT
Sbjct: 126 AGKEVTAVYIVERRDARTEAYLAILMDRSTQLPMIVASAQGGMDIEGVAAKDPDAIKTFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D+++G+T+ LA K+A L + +
Sbjct: 186 VDLNEGVTDELAT---------------------------------KVASVLGYTEEAIP 212
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+AA VQ L+ +F D TQ+EINPL ET + +V+++DAK+ FDDNA FRQ+ +FS +
Sbjct: 213 EAAKAVQNLYKVFTEKDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQEEVFSWRDP 272
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ DP+E +ASKY LN++ +DGNI +VNGAGLAMATMDIIKL+GGEPANFLD GG
Sbjct: 273 TQEDPQESEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCGGTATP 332
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E+I +AF +I SD V I VN+FGGIV C +A+GL+ A K+FKL IP+VVRL+GTN++
Sbjct: 333 ETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFKLDIPVVVRLQGTNME 392
Query: 401 EGKRILDESKLPLIFASDLDEAA 423
+ K +++ S L L DLD AA
Sbjct: 393 KAKELIENSGLKLYAFEDLDPAA 415
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+FKL IP+VVRL+GTN+++ K +++ S L L DLD AA +
Sbjct: 366 AEGLIAATKNFKLDIPVVVRLQGTNMEKAKELIENSGLKLYAFEDLDPAAEKIV 419
>gi|109120691|ref|XP_001100026.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 5 [Macaca mulatta]
Length = 463
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+ +GI + A LAQK+ F
Sbjct: 203 IITEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA++ NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
T V + K ++ S L ++ DLDEAA +V
Sbjct: 410 XTRVDDAKALIAGSGLKILACDDLDEAARMV 440
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+ T V + K ++ S L ++ DLDEAA +
Sbjct: 388 AQGIVTALKDLEIKIPVVVRLQXTRVDDAKALIAGSGLKILACDDLDEAARMVV 441
>gi|335772744|gb|AEH58163.1| mitochondrial succinyl-CoA ligase (ADP-forming) subunit beta-like
protein, partial [Equus caballus]
Length = 373
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/381 (46%), Positives = 241/381 (63%), Gaps = 33/381 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL TKQT + G
Sbjct: 3 KDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRIC 62
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP + PID+ +
Sbjct: 63 NQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVE 122
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI + A LAQK+ F ++ AA
Sbjct: 123 GIKKEQA-----------------------------VRLAQKMG----FPPNIVDSAAEN 149
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+ KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF + ++ D
Sbjct: 150 MVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQDWTQEDE 209
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVGGG + +
Sbjct: 210 RDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATVHQVTE 269
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+GT V + K +
Sbjct: 270 AFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQGTRVDDAKAL 329
Query: 406 LDESKLPLIFASDLDEAASLV 426
+ +S L ++ DLDEAA +V
Sbjct: 330 ITDSGLKILACDDLDEAAKMV 350
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 298 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 351
>gi|344281688|ref|XP_003412610.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Loxodonta africana]
Length = 481
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 101 AFAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 160
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT K G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 161 KQTGKKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 220
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 221 IVKEPIDIVEGIRKEQA-----------------------------VRLAQKMG----FP 247
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+ LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 248 HNIVDSAAENMVKLYELFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 307
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ A+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 308 DLQDWTQEDERDKAATKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 367
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A + ++ IP+VVRL+
Sbjct: 368 GGATVDQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVRDLEIKIPIVVRLQ 427
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 428 GTRVDDAKALIADSGLKILACDDLDEAAKMV 458
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 406 AQGIVMAVRDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 459
>gi|149635784|ref|XP_001513628.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Ornithorhynchus anatinus]
Length = 464
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A +I + L K+ V+KAQ+LAGGRG G F+ G K GV + ++ I +MIG KL T
Sbjct: 84 AYSIAQKLGSKDVVLKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKKISSQMIGKKLFT 143
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 144 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAENPDA 203
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 204 IVKEPIDIMEGIKKEQA-----------------------------VRLAQKMG----FP 230
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L AA + KL+NLF+ DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 231 ANLVDPAAENMMKLYNLFMKYDATMVEINPMVEDADGVVLCMDAKINFDSNSAYRQKKIF 290
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 291 DLQDWTQEDQRDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 350
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++IP+VVRL+
Sbjct: 351 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDITIPIVVRLQ 410
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 411 GTRVDDAKALITASGLKILACDDLDEAAKMV 441
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 389 AQGIVMAVKDLDITIPIVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 442
>gi|109120695|ref|XP_001099529.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial isoform 1 [Macaca mulatta]
Length = 446
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 66 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 125
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 126 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 185
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+ +GI + A LAQK+ F
Sbjct: 186 IITEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 212
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 213 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 272
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA++ NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 273 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 332
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 333 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTALKDLEIKIPVVVRLQ 392
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
T V + K ++ S L ++ DLDEAA +V
Sbjct: 393 XTRVDDAKALIAGSGLKILACDDLDEAARMV 423
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+ T V + K ++ S L ++ DLDEAA +
Sbjct: 371 AQGIVTALKDLEIKIPVVVRLQXTRVDDAKALIAGSGLKILACDDLDEAARMVV 424
>gi|355722589|gb|AES07623.1| succinate-CoA ligase, ADP-forming, beta subunit [Mustela putorius
furo]
Length = 433
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 54 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 113
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 114 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 173
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 174 IFKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 200
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 201 PNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGSVLCMDAKINFDSNSAYRQKKIF 260
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D RE A+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 261 DLQDWTQEDEREKGAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 320
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 321 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 380
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 381 GTRVDDAKALIADSGLKILACDDLDEAAKMV 411
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 359 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 412
>gi|3766201|gb|AAC64398.1| ATP-specific succinyl-CoA synthetase beta subunit [Mus musculus]
gi|148703905|gb|EDL35852.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit, isoform
CRA_a [Mus musculus]
Length = 426
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 247/391 (63%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F +G K GV + ++ + +MIG KLIT
Sbjct: 46 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 105
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 106 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEA 165
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI K +A T LAQK+ F
Sbjct: 166 IVKEPIDIVEGIK-----------------KEQAVT------------LAQKMG----FP 192
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + +V+ +DAKINFD N+ +RQK IF
Sbjct: 193 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 252
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ D R+ +A+ ++NY+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 253 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 312
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 313 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 372
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 373 GTRVDDAKALIADSGLKILACDDLDEAAKMV 403
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 351 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 404
>gi|390457669|ref|XP_002742721.2| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Callithrix jacchus]
Length = 463
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIVEGIKKEQAL-----------------------------RLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVDSAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K + +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALRADSGLKILACDDLDEAARMV 440
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K + +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALRADSGLKILACDDLDEAARMVV 441
>gi|327261083|ref|XP_003215361.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Anolis carolinensis]
Length = 463
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/391 (45%), Positives = 245/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A N+ K + K+ V+KAQ+LAGGRG G F+ G K GV + ++ I +MIG KL T
Sbjct: 83 AYNVAKQIGTKDLVVKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAREISSRMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V + + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 143 KQTGEKGRICNQVFICERRYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPDA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ P+D+ +GI + A LA+K+ F
Sbjct: 203 IAKEPVDIVEGIQKEQA-----------------------------IRLAKKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +AA + K++NLF+ DAT +EINP+VE V+ +DAKINFD N+ +RQ+ IF
Sbjct: 230 ANLVNEAAENMIKIYNLFIKFDATMVEINPMVEDSTGIVMCMDAKINFDSNSAYRQQKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D R+ DA+K +LNY+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 SLQDWTQEDDRDRDAAKSDLNYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AFR+I+SD V+ ILVN+FGGI+ C IA+G++ A K +L IP+VVRL+
Sbjct: 350 GGATAQRVTEAFRLITSDKKVQAILVNIFGGIMRCDVIAQGIIMAVKDLELKIPIVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALITDSGLKILACDDLDEAAKMV 440
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K +L IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIIMAVKDLELKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 441
>gi|158749584|ref|NP_001101857.2| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Rattus norvegicus]
Length = 465
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 246/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F +G K GV + ++ + +MIG KLIT
Sbjct: 85 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 144
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 145 KQTGAKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAENPEA 204
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ P+D+ +G+ K +A T LA+K+ F
Sbjct: 205 IVKEPVDIIEGVK-----------------KEQAVT------------LAKKMG----FP 231
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + +V+ +DAKINFD N+ +RQK IF
Sbjct: 232 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDADGKVLCMDAKINFDSNSAYRQKKIF 291
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + S+ D R+ DA+ ++NY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 292 ALQDWSQEDERDKDAADADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 351
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 352 GGATVHQVTEAFKLITSDKRVQAILVNIFGGIMRCDIIAQGIVMAVKDLEIRIPVVVRLQ 411
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 412 GTRVDDAKALIADSGLKILACDDLDEAAKMV 442
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 390 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 443
>gi|158297958|ref|XP_318074.3| AGAP004744-PA [Anopheles gambiae str. PEST]
gi|157014577|gb|EAA13239.4| AGAP004744-PA [Anopheles gambiae str. PEST]
Length = 446
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/390 (45%), Positives = 245/390 (62%), Gaps = 34/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I DLN K V+KAQ+LAGGRG G F NG K GV + Q+ I KMI L+T
Sbjct: 63 AKKIATDLNTKNLVLKAQVLAGGRGKGSFKNGLKGGVRVVFSPQEAEDISGKMINQLLVT 122
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VMVA+ RE YF ++ +R NGPV+I S GG +IE VAA+ P
Sbjct: 123 KQTGAAGRICNSVMVAERKFPRREFYFAVMMERAFNGPVLIASSQGGVNIEEVAAENPDA 182
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+++G+ + A +A K +V++ + L+
Sbjct: 183 IVYEPIDINKGLQKEQAVQVAK--------KVGLNDKVEETAKMLLN------------- 221
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+++LF+ DA +EINP E ++DAK+ FDDNAEFRQK++F
Sbjct: 222 -------------MYDLFVKKDALLIEINPYAEDAAETYFALDAKMRFDDNAEFRQKDLF 268
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ ++S+ D +EV+ASK++LNY+ +DG+IGCLVNGAGLAMATMDIIKLHGG+PANFLDVG
Sbjct: 269 AKRDLSQEDKKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPANFLDVG 328
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +++ +AF+II+SD V ILVN+FGGI+ C IA+G++ A K + +P++VRL+
Sbjct: 329 GGASVKAVKEAFKIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMPIIVRLQ 388
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASL 425
GTNV E K ++ +SKL ++ DLDEAA L
Sbjct: 389 GTNVNEAKELIKKSKLRILPKDDLDEAAML 418
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K + +P++VRL+GTNV E K ++ +SKL ++ DLDEAA
Sbjct: 367 AEGIIQATKELNIKMPIIVRLQGTNVNEAKELIKKSKLRILPKDDLDEAA 416
>gi|154273072|ref|XP_001537388.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Ajellomyces capsulatus NAm1]
gi|150415900|gb|EDN11244.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Ajellomyces capsulatus NAm1]
Length = 444
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 240/396 (60%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K ++ ++ VIKAQ+LAGGRG G FDNG K GV + + ++
Sbjct: 56 EVARTAEEAEAVAKQIDAEDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFADQ 115
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGHKL+TKQT G N V + + RE Y I+ DR PV++ S GG DIE
Sbjct: 116 MIGHKLVTKQTGAQGRICNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGVDIET 175
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + T +D++ G+T+ +A++IA L F
Sbjct: 176 VAKETPDAITTTSVDINVGVTDEMARNIAKDLGFS------------------------- 210
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
LE +A +QKL+ +F+ DATQ+EINPL ET E EV+++DAK+ FDDNA
Sbjct: 211 -EQCLE-------EAKNTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNA 262
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK IFS + ++ DP EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 263 EFRQKEIFSWRDTTQEDPDEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGN 322
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++I AF +I+SD V I VN+FGGIV C IA+GL+N L
Sbjct: 323 PANFLDVGGGATPQAIRAAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLR 382
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+ + +++ES L + DL AA
Sbjct: 383 TPIVARLQGTNMAKAHELINESGLKIFSMEDLQNAA 418
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+ + +++ES L + DL AA
Sbjct: 369 AQGLINVVNEMNLRTPIVARLQGTNMAKAHELINESGLKIFSMEDLQNAA 418
>gi|148703906|gb|EDL35853.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit, isoform
CRA_b [Mus musculus]
Length = 442
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 247/391 (63%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F +G K GV + ++ + +MIG KLIT
Sbjct: 62 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 121
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 122 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEA 181
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI K +A T LAQK+ F
Sbjct: 182 IVKEPIDIVEGIK-----------------KEQAVT------------LAQKMG----FP 208
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + +V+ +DAKINFD N+ +RQK IF
Sbjct: 209 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 268
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ D R+ +A+ ++NY+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 269 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 328
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 329 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 388
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 389 GTRVDDAKALIADSGLKILACDDLDEAAKMV 419
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 367 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 420
>gi|74151797|dbj|BAE29687.1| unnamed protein product [Mus musculus]
Length = 470
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 247/391 (63%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F +G K GV + ++ + +MIG KLIT
Sbjct: 90 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 149
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 150 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEA 209
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI K +A T LAQK+ F
Sbjct: 210 IVKEPIDIVEGIK-----------------KEQAVT------------LAQKMG----FP 236
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + +V+ +DAKINFD N+ +RQK IF
Sbjct: 237 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 296
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ D R+ +A+ ++NY+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 297 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 356
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 357 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 416
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 417 GTRVDDAKALIADSGLKILACDDLDEAAKMV 447
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 395 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 448
>gi|60099069|emb|CAH65365.1| hypothetical protein RCJMB04_22i13 [Gallus gallus]
Length = 463
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 241/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K++ K+ V+KAQ+LAGGRG G F+ G K GV + ++ I KMIG KL T
Sbjct: 83 AYKIAKEIGTKDLVVKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKDISSKMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V + + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 143 KQTGEKGRICNQVFICERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAENPDA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +AA + KL+NLFL DAT +EINP+VE V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DMQDWTQEDERDRDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K L IP+VVRL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDLKIPIVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALITASGLKILACDDLDEAAKMV 440
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLDLKIPIVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 441
>gi|449484074|ref|XP_004175112.1| PREDICTED: LOW QUALITY PROTEIN: succinyl-CoA ligase [ADP-forming]
subunit beta, mitochondrial [Taeniopygia guttata]
Length = 469
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K++ K+ V+KAQ+LAGGRG G F+ G K GV + ++ + +MIG KL T
Sbjct: 89 AYKIAKEIGSKDIVVKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 148
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V + + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 149 KQTGEKGRICNQVFICERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAENPEA 208
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 209 IIKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 235
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +AA + KL+NLFL DAT +EINP+VE V+ +DAKINFD N+ +RQK IF
Sbjct: 236 PNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAYRQKKIF 295
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 296 DMQDWTQEDQRDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 355
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K +L +P+VVRL+
Sbjct: 356 GGATAQQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVTAVKDLELKVPIVVRLQ 415
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 416 GTRVDDAKALITASGLKILACDDLDEAAKMV 446
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L +P+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 394 AQGIVTAVKDLELKVPIVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 447
>gi|121714307|ref|XP_001274764.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
clavatus NRRL 1]
gi|119402918|gb|EAW13338.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus
clavatus NRRL 1]
Length = 453
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/391 (45%), Positives = 237/391 (60%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 70 AEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 129
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y I+ DR PV++ S GG DIE VA +
Sbjct: 130 LITKQTGAAGRLCNAVYICERKFARREFYLAILMDRATQSPVIVSSSQGGMDIEAVAKEN 189
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PI+++ G+T+ +A+ IA L F Q I D
Sbjct: 190 PEAIITTPININVGVTDDIARKIATDLGFS----------------------EQCIED-- 225
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A T +Q L+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 226 ---------AKTTIQNLYRVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQK 276
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++FS + ++ D EV A++Y LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 277 DVFSWRDTTQEDADEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFL 336
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V + VN+FGGIV C IA+GL+N L IP+V
Sbjct: 337 DVGGGATPAAIKSAFELITSDPKVTAVFVNIFGGIVRCDAIAQGLINVVHEMDLRIPIVA 396
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ +++++ES L + DL AA
Sbjct: 397 RLQGTNMEQAQKLINESGLKIFSIEDLQSAA 427
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L IP+V RL+GTN+++ +++++ES L + DL AA
Sbjct: 378 AQGLINVVHEMDLRIPIVARLQGTNMEQAQKLINESGLKIFSIEDLQSAA 427
>gi|225555061|gb|EEH03354.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus G186AR]
gi|240281269|gb|EER44772.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus H143]
gi|325092238|gb|EGC45548.1| succinyl-CoA ligase beta-chain [Ajellomyces capsulatus H88]
Length = 444
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 239/396 (60%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K + ++ VIKAQ+LAGGRG G FDNG K GV + + ++
Sbjct: 56 EVARTAEEAEAVAKQIGAEDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFADQ 115
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGHKL+TKQT G N V + + RE Y I+ DR PV++ S GG DIE
Sbjct: 116 MIGHKLVTKQTGAQGRICNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGVDIET 175
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + T +D++ G+T+ +A++IA L F
Sbjct: 176 VAKETPDAITTTSVDINVGVTDEMARNIAKDLGFS------------------------- 210
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
LE +A +QKL+ +F+ DATQ+EINPL ET E EV+++DAK+ FDDNA
Sbjct: 211 -EQCLE-------EAKNTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNA 262
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK IFS + ++ DP EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 263 EFRQKEIFSWRDTTQEDPDEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGN 322
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++I AF +I+SD V I VN+FGGIV C IA+GL+N L
Sbjct: 323 PANFLDVGGGATPQAIRAAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLR 382
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+ + +++ES L + DL AA
Sbjct: 383 TPIVARLQGTNMAKAHELINESGLKIFSMEDLQNAA 418
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+ + +++ES L + DL AA
Sbjct: 369 AQGLINVVNEMNLRTPIVARLQGTNMAKAHELINESGLKIFSMEDLQNAA 418
>gi|361128672|gb|EHL00602.1| putative succinyl-CoA ligase [Glarea lozoyensis 74030]
Length = 445
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/383 (44%), Positives = 234/383 (61%), Gaps = 33/383 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
KD+ + VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKL+TKQT
Sbjct: 70 KDIGGDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGA 129
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G N V + + RE Y I+ DR GPV++ S GG DIE VA + P + T
Sbjct: 130 QGRLCNSVYICERKFARREFYLAILMDRASQGPVIVSSSQGGMDIEGVAKENPDAITTTY 189
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID+H+G+T+ +A+ I+ L F A +QKL+ +F+
Sbjct: 190 IDIHKGVTDDIARKISADLGFSEQCIEDAKDTIQKLYKIFMEK----------------- 232
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK IFS +
Sbjct: 233 ----------------DATQIEINPLSETSDHKVLAMDAKLGFDDNAEFRQKEIFSMRDT 276
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ D EV A++ LN++ + G+IGCLVNGAGLAMATMDIIKL+GGEPANFLDVGGG
Sbjct: 277 TQEDAEEVRAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGATP 336
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
++I +AF +I+SD V I VN+FGGIV C IAKGL++ +S L IP++ RL+GTN++
Sbjct: 337 QAIKEAFTLITSDPKVTAIFVNIFGGIVRCDAIAKGLISTVESMNLRIPIIARLQGTNME 396
Query: 401 EGKRILDESKLPLIFASDLDEAA 423
++++ES L + DL AA
Sbjct: 397 AAHKLINESGLKIFSIDDLQNAA 419
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ +S L IP++ RL+GTN++ ++++ES L + DL AA
Sbjct: 370 AKGLISTVESMNLRIPIIARLQGTNMEAAHKLINESGLKIFSIDDLQNAA 419
>gi|74139919|dbj|BAE31798.1| unnamed protein product [Mus musculus]
Length = 470
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 247/391 (63%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F +G K GV + ++ + +MIG KLIT
Sbjct: 90 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 149
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 150 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEA 209
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI K +A T LAQK+ F
Sbjct: 210 IVKEPIDIVEGIK-----------------KEQAVT------------LAQKMG----FP 236
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + +V+ +DAKINFD N+ +RQK IF
Sbjct: 237 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 296
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ D R+ +A+ ++NY+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 297 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 356
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 357 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 416
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 417 GTRVDDAKALIADSGLKILACDDLDEAAKMV 447
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 395 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 448
>gi|406864436|gb|EKD17481.1| ATP-specific succinyl-CoA synthetase beta subunit [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 444
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/377 (45%), Positives = 236/377 (62%), Gaps = 33/377 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ VIKAQ+LAGGRG G FDNG K GV + + E+MIGHKL+TKQT G +
Sbjct: 75 DMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLVTKQTGAQGRICS 134
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
V + + RE Y I+ DR GPV++ S GG DIENVA +TP + T +D+H+G
Sbjct: 135 SVYICERKFARREFYLAILMDRASQGPVIVSSSQGGMDIENVAKETPEAITTTHVDIHKG 194
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+T+ +A+ IA L F Q I D A +
Sbjct: 195 VTDEMARKIATDLGFS----------------------EQCIED-----------AKDTI 221
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
QKL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQK +FS + ++ D
Sbjct: 222 QKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVFSWRDTAQEDAD 281
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A++ LN++ + G+IGCLVNGAGLAMATMDIIKL+GGEPANFLDVGGG ++I +A
Sbjct: 282 EVKAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGATPQAIREA 341
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F +I+SD V I VN+FGGIV C IA+GL++ +S LSIP++ RL+GTN++ +++
Sbjct: 342 FTLITSDPKVTAIFVNIFGGIVRCDAIAQGLISVVESMNLSIPIIARLQGTNMEAAHKLI 401
Query: 407 DESKLPLIFASDLDEAA 423
++ L + DL AA
Sbjct: 402 SDAGLKIFSIDDLQTAA 418
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ +S LSIP++ RL+GTN++ +++ ++ L + DL AA
Sbjct: 369 AQGLISVVESMNLSIPIIARLQGTNMEAAHKLISDAGLKIFSIDDLQTAA 418
>gi|403303274|ref|XP_003942262.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Saimiri boliviensis boliviensis]
Length = 463
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ P+D+ +GI + A LAQK+ F
Sbjct: 203 IIKEPVDIVEGIKKEQAL-----------------------------RLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVDSAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKAHLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>gi|255936143|ref|XP_002559098.1| Pc13g06650 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583718|emb|CAP91734.1| Pc13g06650 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 443
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 236/391 (60%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A I K + + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 60 AEEAETIAKSIGGDDLVIKAQVLAGGRGKGQFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT G N V + + RE Y ++ DR GPV++ S GG DIE VA ++
Sbjct: 120 LVTKQTGAAGRICNSVYICERKFARREFYLAVLLDRTTRGPVIVSSSQGGMDIEAVAKES 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+H G+T+ +A+ IA L F Q I +
Sbjct: 180 PDAIMTTPIDIHVGVTDEIARTIATDLGFS----------------------EQCIEE-- 215
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A + +Q L+ F+ DATQLEINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 216 ---------AKSTIQNLYKCFMERDATQLEINPLSETSDHQVLAMDAKLGFDDNAEFRQK 266
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
FS +V++ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 267 EAFSWRDVTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFL 326
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V + VN+FGGIV C IA+GL+N + L P++
Sbjct: 327 DVGGGATPAAIKSAFELITSDPKVSAVFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIIA 386
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ ++++ES L + DL AA
Sbjct: 387 RLQGTNMEQAHKLINESGLKIFSIEDLQNAA 417
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P++ RL+GTN+++ ++++ES L + DL AA
Sbjct: 368 AQGLINVVQEMNLRTPIIARLQGTNMEQAHKLINESGLKIFSIEDLQNAA 417
>gi|432931333|ref|XP_004081660.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Oryzias latipes]
Length = 466
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/394 (45%), Positives = 242/394 (61%), Gaps = 33/394 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A N+ K + K+ V+KAQ+LAGGRG G F+ G K GV + +++ I +MIG K
Sbjct: 83 AEEAYNVAKQIGTKDLVVKAQVLAGGRGKGTFEGGLKGGVRIVYSPEEVRDISSQMIGRK 142
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQT + G N+V V + RE YF I +R GPV+I S GG +IE+VAA+
Sbjct: 143 LFTKQTGEAGRICNQVFVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAEN 202
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + P+D+ +GI K + A +V AQK+
Sbjct: 203 PDAIVKEPVDIVEGI------------------KMEQAVKV-----------AQKMG--- 230
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F L +AA + KL+NLF+ DA+ +EINP+VE V+ +DAKINFD NA +RQK
Sbjct: 231 -FPPALVNEAAENMIKLYNLFIKYDASMVEINPMVEDSSGTVMCMDAKINFDSNAAYRQK 289
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + S+ DPR+ A+ +LNY+G+DG IGCLVNGAGLAMATMDIIKLHGG PANFL
Sbjct: 290 KVFEMRDWSQEDPRDHQAATADLNYIGLDGTIGCLVNGAGLAMATMDIIKLHGGTPANFL 349
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG + +AF++I+SD V+ ILVN+FGGI+ C IA+G++ A + L IP+VV
Sbjct: 350 DVGGGATAHQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIIMAVRDLDLKIPIVV 409
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RL+GT V + K ++ S L ++ DLDEAA +V
Sbjct: 410 RLQGTRVDDAKALIASSPLKILACDDLDEAAKMV 443
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A + L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 391 AQGIIMAVRDLDLKIPIVVRLQGTRVDDAKALIASSPLKILACDDLDEAAKMVV 444
>gi|426236317|ref|XP_004012116.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Ovis aries]
Length = 463
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/391 (45%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A ++A+ + F
Sbjct: 203 IVKEPIDIVEGIKKEQAV---------------------------------RLAEKMGFP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 ASIVDSAAENMIKLYDLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDANSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>gi|187469277|gb|AAI66998.1| Sucla2 protein [Rattus norvegicus]
Length = 438
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 246/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F +G K GV + ++ + +MIG KLIT
Sbjct: 58 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 117
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 118 KQTGAKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAENPEA 177
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ P+D+ +G+ K +A T LA+K+ F
Sbjct: 178 IVKEPVDIIEGVK-----------------KEQAVT------------LAKKMG----FP 204
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + +V+ +DAKINFD N+ +RQK IF
Sbjct: 205 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDADGKVLCMDAKINFDSNSAYRQKKIF 264
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + S+ D R+ DA+ ++NY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 265 ALQDWSQEDERDKDAADADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 324
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 325 GGATVHQVTEAFKLITSDKRVQAILVNIFGGIMRCDIIAQGIVMAVKDLEIRIPVVVRLQ 384
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 385 GTRVDDAKALIADSGLKILACDDLDEAAKMV 415
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 363 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 416
>gi|195152918|ref|XP_002017383.1| GL21555 [Drosophila persimilis]
gi|194112440|gb|EDW34483.1| GL21555 [Drosophila persimilis]
Length = 474
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/425 (43%), Positives = 249/425 (58%), Gaps = 39/425 (9%)
Query: 7 QQIANF------SYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRG 60
QQ+ N SY + S + + ++ + A++I L V+KAQ+LAGGRG
Sbjct: 33 QQLRNLNVQEHVSYTLLNESGIPTPRFAVAKNGKEASDIANKLKTDNLVLKAQVLAGGRG 92
Query: 61 LGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRET 120
G F NG K GV + + I KMI LITKQT G KVMVA+ RE
Sbjct: 93 KGTFKNGLKGGVRVVYDAKTAEDISSKMIDQLLITKQTGAAGRICKKVMVAERKFPRREF 152
Query: 121 YFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLE 180
YF ++ +R NGPV+I S GG DIE VA + P + PID+ +G+TE A I + +
Sbjct: 153 YFAVMMERAFNGPVLIASKEGGVDIEEVAKENPDAIIYEPIDIARGLTEEQACKIVEKVG 212
Query: 181 FQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQ 240
GD A ++ L NL + LF+ DA
Sbjct: 213 LGGD---GADEHIKMLLNL------------------------------YQLFVKKDALL 239
Query: 241 LEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGM 300
+EINP E ++DAK+ FDDNAEFRQK +FS + ++ DP+EV+A+KYNLNY+ +
Sbjct: 240 VEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELFSMRDWTQEDPKEVEAAKYNLNYIAL 299
Query: 301 DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCIL 360
DG IGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG +++ AF+II+SD V C+L
Sbjct: 300 DGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATADAVKAAFKIITSDRKVLCLL 359
Query: 361 VNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLD 420
VN+FGGI+ C IA+G++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD
Sbjct: 360 VNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRASGLKILARDDLD 419
Query: 421 EAASL 425
+AA L
Sbjct: 420 KAADL 424
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRASGLKILARDDLDKAADLAV 426
>gi|195445339|ref|XP_002070282.1| GK11971 [Drosophila willistoni]
gi|194166367|gb|EDW81268.1| GK11971 [Drosophila willistoni]
Length = 524
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/425 (43%), Positives = 249/425 (58%), Gaps = 39/425 (9%)
Query: 7 QQIANF------SYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRG 60
QQ+ N SY + S + + ++ + A +I L V+KAQ+LAGGRG
Sbjct: 33 QQLRNLNVQEHVSYTLLNESDIPTPRFAVAKNGKEAHDIATKLKTDNLVLKAQVLAGGRG 92
Query: 61 LGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRET 120
G F NG K GV + + I KM+ L+T+QT G KVMVA+ RE
Sbjct: 93 KGAFKNGLKGGVRVVYDPESAEQITSKMVDQLLVTRQTGAAGRICKKVMVAERKFPRREF 152
Query: 121 YFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLE 180
YF ++ +R NGPV+I S GG DIE VA ++P + PID+ +G+T A I + +
Sbjct: 153 YFAVMMERAFNGPVLIASKEGGVDIEEVAKESPDAIIYEPIDITKGLTNEQAAKIVNKVG 212
Query: 181 FQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQ 240
GD A VQ L NL + LF+ DA
Sbjct: 213 LGGD---NADEHVQMLLNL------------------------------YKLFVKKDALL 239
Query: 241 LEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGM 300
+EINP E ++DAK+ FDDNAEFRQK +FS + ++ DP+EV+A+KYNLNY+ +
Sbjct: 240 VEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELFSLRDWTQEDPKEVEAAKYNLNYIAL 299
Query: 301 DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCIL 360
DG IGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG E++ AF+II+SD V CIL
Sbjct: 300 DGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDKKVLCIL 359
Query: 361 VNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLD 420
VN+FGGI+ C IA+G+++A K L++P+VVRL+GT V+E + ++ S L ++ DLD
Sbjct: 360 VNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGTKVKEARELIRSSGLKILARDDLD 419
Query: 421 EAASL 425
+AA L
Sbjct: 420 KAADL 424
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRSSGLKILARDDLDKAADLAV 426
>gi|258577823|ref|XP_002543093.1| succinyl-CoA ligase beta-chain [Uncinocarpus reesii 1704]
gi|237903359|gb|EEP77760.1| succinyl-CoA ligase beta-chain [Uncinocarpus reesii 1704]
Length = 443
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/396 (44%), Positives = 239/396 (60%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K L ++ VIKAQ+LAGGRG G FDNG K GV + + +
Sbjct: 55 EVARTADEAEAVAKKLGGEDVVIKAQVLAGGRGKGTFDNGLKGGVRILYSPTEARMFAGQ 114
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGHKLITKQT G N V + + RE Y ++ DR PV++ S GG DIE
Sbjct: 115 MIGHKLITKQTGARGRLCNAVYICERKYARREFYLAVLMDRASQSPVIVSSSQGGMDIEA 174
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA ++P + T ID++ G+T+ +A+ K
Sbjct: 175 VAKESPDAITTTKIDINVGVTDEIAR---------------------------------K 201
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L F +A +QKL+ +F+ DATQ+EINPL ET + V+++DAK+ FDDNA
Sbjct: 202 IATGLGFSEQCIEEAKDTIQKLYQVFMERDATQIEINPLAETTDYRVLAMDAKLGFDDNA 261
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK++FS + ++ DP EV A++Y LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 262 EFRQKDVFSWRDTTQEDPDEVKAAEYGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGN 321
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L
Sbjct: 322 PANFLDVGGGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLR 381
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 382 TPIVARLQGTNMEKAHQLINDSGLKIFSIEDLQNAA 417
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 368 AQGLINVVRDMNLRTPIVARLQGTNMEKAHQLINDSGLKIFSIEDLQNAA 417
>gi|358396070|gb|EHK45457.1| hypothetical protein TRIATDRAFT_300082 [Trichoderma atroviride IMI
206040]
Length = 447
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/414 (44%), Positives = 245/414 (59%), Gaps = 34/414 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + KD+ + VIKAQ+LAGGRG G FDNG K GV + + ++MIGHK
Sbjct: 64 AAEAKAVAKDIGTGDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFAQQMIGHK 123
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y I+ DR PV++ S GG DIE VA +
Sbjct: 124 LITKQTGADGRLCNAVYICERKFARREFYLAILMDRASQTPVIVSSSQGGVDIETVAKEQ 183
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID+ G+T+ +A+ IA L F Q I D
Sbjct: 184 PDAITTTYIDIKTGVTDEIARGIATGLGFS----------------------EQCIED-- 219
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +QKL+ +FL DATQ+EINPL ET + +V+ +DAK FDDNA++RQK
Sbjct: 220 ---------AKDTIQKLYKIFLERDATQIEINPLSETSDHQVLCMDAKFGFDDNADYRQK 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + ++ DP EV A++ NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 271 EVFEWRDTTQEDPDEVRAAQSNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SDS V + VN+FGGIV C IA GL+ ++ L IP++
Sbjct: 331 DVGGGATPAAIKEAFELITSDSKVTAVFVNIFGGIVRCDAIANGLIKTVETLNLKIPIIA 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACKSFKLSIPLVVRLEGT 445
RL+GTNV+ +I++ES L + DL AA V K KL+ + V +E T
Sbjct: 391 RLQGTNVELAHQIINESGLKIFSIDDLQSAAEKAVQLSKVVKLARDIDVGVEFT 444
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ ++ L IP++ RL+GTNV+ +I++ES L + DL AA
Sbjct: 372 ANGLIKTVETLNLKIPIIARLQGTNVELAHQIINESGLKIFSIDDLQSAA 421
>gi|195389212|ref|XP_002053271.1| GJ23792 [Drosophila virilis]
gi|194151357|gb|EDW66791.1| GJ23792 [Drosophila virilis]
Length = 451
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 249/425 (58%), Gaps = 39/425 (9%)
Query: 7 QQIANF------SYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRG 60
QQ+ N SY + S++ + ++ + A +I + L V+KAQ+LAGGRG
Sbjct: 33 QQLRNLNVQEHVSYTLLNESSIPTPRFAVAKNGKEAHDIAQKLKTDNLVLKAQVLAGGRG 92
Query: 61 LGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRET 120
G F NG K GV + + KMI L+TKQT G KVMVA+ RE
Sbjct: 93 KGTFKNGLKGGVRVVFSPESAEEYATKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREF 152
Query: 121 YFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLE 180
YF ++ +R NGPV+I S GG DIE VA + P + PID+ +G+T+ A I D +
Sbjct: 153 YFSVMMERAFNGPVLIASKEGGVDIEEVAKENPEAIIYEPIDIGKGLTKEQACKIVDKVG 212
Query: 181 FQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQ 240
G + A +Q L NL + LF+ DA
Sbjct: 213 LGG---SSADEHIQMLLNL------------------------------YKLFVKKDALL 239
Query: 241 LEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGM 300
+EINP E ++DAK+ FDDNAEFRQK +FS + ++ DP+EV+A+KYNLNY+ +
Sbjct: 240 VEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELFSMRDWTQEDPKEVEAAKYNLNYIAL 299
Query: 301 DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCIL 360
DG IGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG E++ AF+II+SD V C+L
Sbjct: 300 DGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDKKVMCLL 359
Query: 361 VNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLD 420
VN+FGGI+ C IA+G++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD
Sbjct: 360 VNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRSSGLKILARDDLD 419
Query: 421 EAASL 425
+AA L
Sbjct: 420 KAADL 424
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRSSGLKILARDDLDKAADLAV 426
>gi|171689266|ref|XP_001909573.1| hypothetical protein [Podospora anserina S mat+]
gi|170944595|emb|CAP70706.1| unnamed protein product [Podospora anserina S mat+]
Length = 446
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 182/414 (43%), Positives = 246/414 (59%), Gaps = 34/414 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K + + VIKAQ+LAGGRG G FDNG K GV + + E+MIGHK
Sbjct: 63 AAEAEAVAKSIGSDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHK 122
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR GPV++ S GG DIE VA +
Sbjct: 123 LITKQTGAQGRLCNSVYICERKFARREFYLAVLMDRGSQGPVIVSSSQGGMDIEGVAKEN 182
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID++ G+T+ +A+DIA L F +++ D
Sbjct: 183 PDAINTTYIDINVGVTDEMARDIAVKLGF-----------------------SEQCVD-- 217
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +Q L+ +FL DATQ+EINPL ET + +V+ +DAK NFDDNAEFRQK
Sbjct: 218 --------DAVKTIQNLYKIFLEKDATQIEINPLSETSDHKVMCMDAKFNFDDNAEFRQK 269
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
F + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 270 EAFEWRDTTQEDADEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 329
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+N KS L IP++
Sbjct: 330 DVGGGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIA 389
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACKSFKLSIPLVVRLEGT 445
RL+GTN++E R++++S + + DL AA V K K++ + V +E T
Sbjct: 390 RLQGTNMEEAHRLINDSGMKIFSIDDLQNAAEKAVQLSKVVKMARDIDVGVEFT 443
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N KS L IP++ RL+GTN++E R++++S + + DL AA
Sbjct: 371 AHGLINTVKSLDLKIPIIARLQGTNMEEAHRLINDSGMKIFSIDDLQNAA 420
>gi|417401365|gb|JAA47571.1| Putative gtp-specific succinyl-coa synthetase beta subunit
[Desmodus rotundus]
Length = 463
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/388 (46%), Positives = 242/388 (62%), Gaps = 33/388 (8%)
Query: 39 ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQT 98
I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL TKQT
Sbjct: 86 IAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQT 145
Query: 99 PKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKT 158
+ G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P +
Sbjct: 146 GEKGRVCNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAENPEAIVK 205
Query: 159 IPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDL 218
PID+ +GI + A LAQK+ F ++
Sbjct: 206 EPIDIVEGIRKEQA-----------------------------VRLAQKMG----FPPNV 232
Query: 219 KAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQN 278
AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 233 VDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIFDLQ 292
Query: 279 EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGV 338
+ ++ D R+ DA+K ++NY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVGGG
Sbjct: 293 DWTQEDERDRDAAKADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGA 352
Query: 339 NEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTN 398
+ +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+GT
Sbjct: 353 TVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQGTR 412
Query: 399 VQEGKRILDESKLPLIFASDLDEAASLV 426
V + K ++ +S L ++ DLDEAA +V
Sbjct: 413 VDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>gi|254569344|ref|XP_002491782.1| Beta subunit of succinyl-CoA ligase, which is a mitochondrial
enzyme of the TCA cycle [Komagataella pastoris GS115]
gi|238031579|emb|CAY69502.1| Beta subunit of succinyl-CoA ligase, which is a mitochondrial
enzyme of the TCA cycle [Komagataella pastoris GS115]
gi|328351718|emb|CCA38117.1| succinyl-CoA synthetase beta subunit [Komagataella pastoris CBS
7435]
Length = 412
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/388 (45%), Positives = 239/388 (61%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I ++L+ VIKAQ L GGRG GHFD+G + GV + +++ + +M+ H LIT
Sbjct: 50 AYKIAQNLHSDGLVIKAQALTGGRGKGHFDSGLQGGVKLVSTPEEVRDLAGQMLQHNLIT 109
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQ+ G V+ V V + + E Y I+ DR+ P +++S GG DIE VAAK P
Sbjct: 110 KQSGAAGKLVSAVYVVERKDAVHEAYLAILVDRVSQKPAIVVSSQGGMDIEGVAAKDPSA 169
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+KT PID+ G+T+SLA +IA NL S AQ
Sbjct: 170 IKTFPIDLKTGVTDSLAAEIAS--------------------NLGFSPEAQ--------- 200
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A ++KL+ +F+ DATQ+EINPL E EV+ +DAK FDD+A FR ++
Sbjct: 201 ----VNAQDSIKKLYQIFMEKDATQIEINPLSEVSGNEVLCMDAKFGFDDSALFRHSDVE 256
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D EV+A K+ LN++ +DGNIGCLVNGAGLAMATMDIIKL+GGEPANFLD G
Sbjct: 257 SWRDPTQEDADEVEAGKWGLNFIKLDGNIGCLVNGAGLAMATMDIIKLYGGEPANFLDCG 316
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG ESI +AFR+I ++ VK I VN+FGGIV C +A+GL+ A KS LSIP+VVRL
Sbjct: 317 GGATPESIEKAFRLILTEDKVKGIFVNIFGGIVRCDYVAQGLIAATKSLDLSIPVVVRLN 376
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+ + +++++ES L L DLD AA
Sbjct: 377 GTNLSQAEKLIEESGLKLYSFKDLDPAA 404
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A KS LSIP+VVRL GTN+ + +++++ES L L DLD AA +
Sbjct: 355 AQGLIAATKSLDLSIPVVVRLNGTNLSQAEKLIEESGLKLYSFKDLDPAAEKIV 408
>gi|198454181|ref|XP_002137808.1| GA26331 [Drosophila pseudoobscura pseudoobscura]
gi|198132687|gb|EDY68366.1| GA26331 [Drosophila pseudoobscura pseudoobscura]
Length = 451
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/425 (43%), Positives = 249/425 (58%), Gaps = 39/425 (9%)
Query: 7 QQIANF------SYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRG 60
QQ+ N SY + S + + ++ + A++I L V+KAQ+LAGGRG
Sbjct: 33 QQLRNLNVQEHVSYTLLNESGIPTPRFAVAKNGKEASDIANKLKTDNLVLKAQVLAGGRG 92
Query: 61 LGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRET 120
G F NG K GV + + I KMI LITKQT G KVMVA+ RE
Sbjct: 93 KGTFKNGLKGGVRVVYDPKTAEDISSKMIDQLLITKQTGAAGRICKKVMVAERKFPRREF 152
Query: 121 YFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLE 180
YF ++ +R NGPV+I S GG DIE VA + P + PID+ +G+TE A I + +
Sbjct: 153 YFAVMMERAFNGPVLIASKEGGVDIEEVAKENPDAIIYEPIDIARGLTEEQACKIVEKVG 212
Query: 181 FQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQ 240
GD A ++ L NL + LF+ DA
Sbjct: 213 LGGD---GADEHIKMLLNL------------------------------YQLFVKKDALL 239
Query: 241 LEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGM 300
+EINP E ++DAK+ FDDNAEFRQK +FS + ++ DP+EV+A+KYNLNY+ +
Sbjct: 240 VEINPYAEDAMSGFFALDAKLRFDDNAEFRQKELFSMRDWTQEDPKEVEAAKYNLNYIAL 299
Query: 301 DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCIL 360
DG IGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG +++ AF+II+SD V C+L
Sbjct: 300 DGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATADAVKAAFKIITSDRKVLCLL 359
Query: 361 VNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLD 420
VN+FGGI+ C IA+G++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD
Sbjct: 360 VNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRASGLKILARDDLD 419
Query: 421 EAASL 425
+AA L
Sbjct: 420 KAADL 424
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRASGLKILARDDLDKAADLAV 426
>gi|385302227|gb|EIF46369.1| succinyl-CoA ligase beta-chain, mitochondrial precursor [Dekkera
bruxellensis AWRI1499]
Length = 414
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 167/389 (42%), Positives = 238/389 (61%), Gaps = 34/389 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K L + V+KAQ L GGRG GHFD G+KSGVH +++ + ++M+ H+LIT
Sbjct: 50 AYEAAKKLGTDDLVVKAQALTGGRGKGHFDTGYKSGVHLVKGAEEVKQVAKEMLNHQLIT 109
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQ+ G V+ V V + E+Y +V DR + ++I S GG +E VA K P
Sbjct: 110 KQSGAAGKPVSAVYVVERKYPLHESYLSVVMDRKNQSTMIIASSEGGMSVEEVAKKNPEA 169
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+K P+++++G+++ LA IA L F D KAA +++ L+ +F
Sbjct: 170 IKKFPVNINEGVSDELATKIASGLGFTADAVPKAAADIKTLYKIFKEK------------ 217
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
DATQ+EINPL ET E ++ VDAK NFD +A +RQK++F
Sbjct: 218 ---------------------DATQVEINPLTETKEHDIECVDAKFNFDKSAAYRQKDVF 256
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ +VS+ DP EV+ASKY LN++ ++GNIGCLVNGAGLAMATMD++KL+GG PANFLDVG
Sbjct: 257 AWRDVSQEDPDEVEASKYGLNFIKLNGNIGCLVNGAGLAMATMDVVKLYGGAPANFLDVG 316
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G ++I +AF +I S+ V I VN+FGGIV C +A GL+NA K+ L +P++ RL
Sbjct: 317 GASTPKTIEKAFELIMSEKKVNAIFVNIFGGIVRCDYVADGLINATKNLGLKVPVIARLR 376
Query: 396 GTNVQEGKRILDESKLP-LIFASDLDEAA 423
GTN++ +++++ S L L SDLDEAA
Sbjct: 377 GTNLEIARKMIENSGLKHLYLYSDLDEAA 405
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLP-LIFASDLDEAA 519
A L+NA K+ L +P++ RL GTN++ +++++ S L L SDLDEAA
Sbjct: 355 ADGLINATKNLGLKVPVIARLRGTNLEIARKMIENSGLKHLYLYSDLDEAA 405
>gi|115496292|ref|NP_001068961.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Bos
taurus]
gi|122144544|sp|Q148D5.1|SUCB1_BOVIN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=ATP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-A chain; Short=SCS-betaA; Flags:
Precursor
gi|109939816|gb|AAI18444.1| Succinate-CoA ligase, ADP-forming, beta subunit [Bos taurus]
Length = 463
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL++ FL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 ASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>gi|85110202|ref|XP_963313.1| succinyl-CoA ligase beta-chain [Neurospora crassa OR74A]
gi|21264057|sp|Q9P567.1|SUCB_NEUCR RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
beta, mitochondrial; AltName: Full=Succinyl-CoA
synthetase beta chain; Short=SCS-beta; Flags: Precursor
gi|7981341|emb|CAB92021.1| probable beta-succinyl CoA synthetase precursor [Neurospora crassa]
gi|28924988|gb|EAA34077.1| succinyl-CoA ligase beta-chain [Neurospora crassa OR74A]
Length = 447
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/406 (44%), Positives = 246/406 (60%), Gaps = 41/406 (10%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A I K + ++ VIKAQ+LAGGRG G FDNG K GV + + E+MI
Sbjct: 61 ARTGAEAEAIAKQIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMI 120
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GHKLITKQT G + V + + RE Y ++ DR GPV++ S GG DIE VA
Sbjct: 121 GHKLITKQTGAQGRLCSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVA 180
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+ P + T ID++ G+T+ +A+DIA L F ++ E
Sbjct: 181 KENPEAIHTTYIDINVGVTDEMARDIATKLGF-----SEQCVE----------------- 218
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+A +QKL+ +F DATQ+EINPL ET + +V+++DAK FDDNA+F
Sbjct: 219 -----------EAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVMAMDAKFGFDDNADF 267
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ +IF + ++ DP EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PA
Sbjct: 268 RQPDIFKLRDTTQEDPDEVRAAQAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPA 327
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+N KS L IP
Sbjct: 328 NFLDVGGGATPAAIREAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIP 387
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
++ RL+GTN++ ++++++S + + DL AA KS +LS
Sbjct: 388 IIARLQGTNMEAARQLINDSGMKIFSIDDLQSAAE-----KSVQLS 428
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N KS L IP++ RL+GTN++ ++++++S + + DL AA
Sbjct: 372 AHGLINTVKSLDLKIPIIARLQGTNMEAARQLINDSGMKIFSIDDLQSAA 421
>gi|443732885|gb|ELU17448.1| hypothetical protein CAPTEDRAFT_164427 [Capitella teleta]
Length = 427
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 171/381 (44%), Positives = 238/381 (62%), Gaps = 33/381 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
K+ VIKAQ+LAGGRG GHF +G K GV + + I KMIG+K+ T QT + G
Sbjct: 57 KDVVIKAQVLAGGRGKGHFASGLKGGVKIVFDADEAKAIASKMIGNKIFTIQTGEQGRLC 116
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+KVMV + + RE YF I+ DR + GPV++ S GG +IE VA +TP + T PID+
Sbjct: 117 SKVMVCERLYSRREYYFAILMDRKYAGPVMLASSQGGMNIEEVARETPEALITEPIDIMT 176
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI A+K+A F+ F GD +A
Sbjct: 177 GIQ---------------------------------PGQAEKVAKFIGFDGDKCNQAVDI 203
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+ KL+ +F+ DAT +EINP+ E V +D KINFD+NA +RQ+ IF + S+ D
Sbjct: 204 ITKLYKIFMKHDATLIEINPMAEDASGRVFCMDCKINFDENAAYRQQEIFKLKDWSQEDE 263
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
R+ A++ +LNY+G+DGNIGCLVNGAGLAM+TMDIIK+HGG PANFLD+GGG + + +
Sbjct: 264 RDAIAARADLNYIGLDGNIGCLVNGAGLAMSTMDIIKIHGGNPANFLDMGGGASASQVTE 323
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF++I+SDS+V+ ILVN+FGGI+ C IA+G++ A K+ KL IP+VVRL+GT + + K +
Sbjct: 324 AFKLITSDSSVQAILVNIFGGIMRCDIIAQGIIEAAKTLKLKIPVVVRLQGTRMDDAKAL 383
Query: 406 LDESKLPLIFASDLDEAASLV 426
L S ++ +LDEAA +V
Sbjct: 384 LGASDFKILAMDNLDEAAKMV 404
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K+ KL IP+VVRL+GT + + K +L S ++ +LDEAA +
Sbjct: 352 AQGIIEAAKTLKLKIPVVVRLQGTRMDDAKALLGASDFKILAMDNLDEAAKMVV 405
>gi|326435318|gb|EGD80888.1| succinyl-CoA ligase subunit beta [Salpingoeca sp. ATCC 50818]
Length = 455
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/394 (44%), Positives = 246/394 (62%), Gaps = 37/394 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQD-IPPILEKMI 89
E+A TA K ++ + V+KAQ+LAGGRG G FDNGF GVH +N + + I +MI
Sbjct: 58 EEAVTAA---KSMSTSKVVLKAQVLAGGRGKGVFDNGFSGGVHVLDNDESKVREIASQMI 114
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH LITKQT K G N + V ++VN+ +E Y ++ DR GPV+I S GG DIE VA
Sbjct: 115 GHNLITKQTGKEGRPCNMIQVVEAVNVQKEFYLALLLDRAAMGPVMIGSSQGGMDIEAVA 174
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+ P + +PID+ G L +AAT + + S +
Sbjct: 175 AENPDAIVKLPIDI------------------DGGLSMEAATNFARQMGIPDSCVD---- 212
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
AA ++ KL+ LFL D + +EINP + EV+ +DAK+NFDDNAEF
Sbjct: 213 -----------SAADQMVKLYQLFLERDCSLVEINPFAQVGPSEVMCLDAKLNFDDNAEF 261
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ +F + + ++ + +V+A+K++LNY+ +DGNIGCLVNGAGLAMATMDII+LHGG PA
Sbjct: 262 RQSGVFEKRDTTQENKADVEAAKFDLNYIQLDGNIGCLVNGAGLAMATMDIIQLHGGSPA 321
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG + +AF++I+ D NV ILVN+FGGI+ C IA+G+++A LS+P
Sbjct: 322 NFLDVGGGATARQVTEAFKLITQDPNVSAILVNIFGGIMRCDVIAEGIIHAASDLDLSVP 381
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
++VRL+GTN +E K ++ S L +I + +LD+AA
Sbjct: 382 IIVRLQGTNREEAKEMIANSGLDIISSDELDDAA 415
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +++A LS+P++VRL+GTN +E K ++ S L +I + +LD+AA
Sbjct: 366 AEGIIHAASDLDLSVPIIVRLQGTNREEAKEMIANSGLDIISSDELDDAA 415
>gi|392571345|gb|EIW64517.1| succinate-CoA ligase [Trametes versicolor FP-101664 SS1]
Length = 416
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/395 (44%), Positives = 244/395 (61%), Gaps = 34/395 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K VIKAQ+LAGGRG GHFDNG + GVH + + KM+G KLIT
Sbjct: 53 AFEVAKQFGSTGSVIKAQVLAGGRGKGHFDNGLQGGVHVIESPEQAKDYASKMLGAKLIT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VM+A+ + + E Y ++ DR GPV++ S GG +IE VAAK P
Sbjct: 113 KQTGAAGRVCNAVMLAERRDPSHEYYVAVLNDRNIGGPVLVASAQGGMNIEEVAAKDPSA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID +G+ ++ A +A L F K + A + + ++F+
Sbjct: 173 IITTPIDFEKGLDKATAVALAKKLGF----KTEGAQD--EAADIFI-------------- 212
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L+ +F DATQ+EINPL ET + V+ +DAK FDDNA FRQK++F
Sbjct: 213 ------------RLYKIFKDKDATQIEINPLGETSDGHVLCMDAKFGFDDNASFRQKDVF 260
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ +V++ +P EV+A KY+LN++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFLDVG
Sbjct: 261 ALRDVTQEEPSEVEAQKYDLNFIKLDGSIGCLVNGAGLAMATMDVLALHGGNPANFLDVG 320
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E++ +AF I+ +D VK I +N+FGGI+ C IA+G++NA K L +PL+VRL+
Sbjct: 321 GGATPETVKKAFEILIADPKVKSIFINIFGGIMRCDYIAEGVINAAKELSLEVPLIVRLK 380
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNACK 430
GT E K ++ +S L +I DLDEAAS NA K
Sbjct: 381 GTKEAEAKAMIRQSGLKIIPFDDLDEAAS--NAVK 413
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++NA K L +PL+VRL+GT E K ++ +S L +I DLDEAA+
Sbjct: 359 AEGVINAAKELSLEVPLIVRLKGTKEAEAKAMIRQSGLKIIPFDDLDEAAS 409
>gi|355700988|gb|EHH29009.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Macaca mulatta]
Length = 463
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ + QK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYHQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA++ NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIAGSGLKILACDDLDEAARMV 440
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIAGSGLKILACDDLDEAARMVV 441
>gi|168001359|ref|XP_001753382.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695261|gb|EDQ81605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 426
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 178/379 (46%), Positives = 238/379 (62%), Gaps = 34/379 (8%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTG 102
L+ E V+K+Q+LAGGRGLG F NG K GVH Q + + KM+G L+TKQT G
Sbjct: 71 LDDTELVVKSQVLAGGRGLGTFKNGLKGGVHIVKRDQ-VEEMAGKMLGQVLVTKQTGAEG 129
Query: 103 INVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
VN+V + + +N+ E YF I DR GPV+I GGT IE++A K P + +PI+
Sbjct: 130 KPVNQVFLCEKLNLINEMYFAIALDRASAGPVMIACAKGGTSIEDLAEKYPDQIIKVPIN 189
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
+++GI++ A+ + + LA K D +
Sbjct: 190 INKGISDEEAEKV-------------------------VKGLAPKKVDM--------QQG 216
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
+++K + LF D TQ+EINPL ET +++ DAK+NFDDNA FRQK IF+ + ++
Sbjct: 217 IDQIKKFYKLFTETDCTQVEINPLAETSTGVMMAADAKLNFDDNAAFRQKEIFAMRDTTQ 276
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DPREV A K +LNY+G+DG IGC+VNGAGLAMATMDIIKL GG PANFLDVGG E+
Sbjct: 277 EDPREVAAGKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLSGGTPANFLDVGGNATEQQ 336
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
+++AF+I++SD+ VK ILVN+FGGI+ C IA G+V A K L +PLVVRLEGTNV G
Sbjct: 337 VVEAFKILTSDTRVKAILVNIFGGIMKCDVIAAGIVAAAKQVNLKVPLVVRLEGTNVDVG 396
Query: 403 KRILDESKLPLIFASDLDE 421
K IL ES + +I A DLD+
Sbjct: 397 KTILKESGMTIITADDLDD 415
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 430 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 469
K L +PLVVRLEGTNV GK IL ES + +I A DLD+
Sbjct: 376 KQVNLKVPLVVRLEGTNVDVGKTILKESGMTIITADDLDD 415
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
K L +PLVVRLEGTNV GK IL ES + +I A DLD+
Sbjct: 376 KQVNLKVPLVVRLEGTNVDVGKTILKESGMTIITADDLDD 415
>gi|326914161|ref|XP_003203396.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Meleagris gallopavo]
Length = 463
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/397 (46%), Positives = 243/397 (61%), Gaps = 36/397 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A I K++ K+ V+KAQ+LAGGRG G F+ G K GV + ++ I KMI
Sbjct: 77 ARTPDEAYKIAKEIGTKDLVVKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKDISSKMI 136
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G KL TKQT + G N+V + + RE YF I +R GPV+I S GG +IE+VA
Sbjct: 137 GKKLFTKQTGEKGRICNQVFICERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVA 196
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+ P + PID+ +GI + A LAQK+
Sbjct: 197 AENPDAIIKEPIDIVEGIKKEQAL-----------------------------RLAQKMG 227
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
F +L +AA + KL+ LFL DAT +EINP+VE V+ +DAKINFD N+ +
Sbjct: 228 ----FPPNLVDEAAENMIKLYYLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAY 283
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK IF + ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PA
Sbjct: 284 RQKKIFDMQDWTQEDERDRDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPA 343
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG + + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K L IP
Sbjct: 344 NFLDVGGGATVQQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLDLKIP 403
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+VVRL+GT V + K ++ S L ++ DLDEAA +V
Sbjct: 404 IVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMV 440
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLDLKIPIVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 441
>gi|170039565|ref|XP_001847601.1| succinyl-coa synthetase beta chain [Culex quinquefasciatus]
gi|167863119|gb|EDS26502.1| succinyl-coa synthetase beta chain [Culex quinquefasciatus]
Length = 446
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 243/393 (61%), Gaps = 34/393 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A I KDLN K V+KAQ+LAGGRG G F NG K GV + ++ I KMI
Sbjct: 60 AQEAEKIAKDLNTKNLVLKAQVLAGGRGKGTFKNGLKGGVRVVFSPKEAQAIGGKMINQL 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT G N VMVA+ RE YF ++ +R NGPV+I S GG +IE VAA+
Sbjct: 120 LVTKQTGAAGRICNSVMVAERKFPRREFYFAVMMERAFNGPVLIASSQGGVNIEEVAAEN 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + PID+ G+ ++ A IA + L A++ A L
Sbjct: 180 PDAIVYEPIDIKAGLQKNQALAIAK--------------------KVGLEDHAEETAKML 219
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+++LF+ DA +EINP E ++DAK+ FDDNAEFRQK
Sbjct: 220 --------------LNMYDLFVKKDALLIEINPYAEDAGETYFALDAKMRFDDNAEFRQK 265
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F++ ++S+ D +EV+ASK++LNY+ +DG+IGC+VNGAGLAMATMDIIKLHGG+PANFL
Sbjct: 266 ELFAKRDLSQEDKKEVEASKFDLNYIALDGSIGCMVNGAGLAMATMDIIKLHGGDPANFL 325
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG ++ +AF+II+SD V ILVN+FGGI+ C IA+G++ A + + +P++V
Sbjct: 326 DVGGGATVNAVREAFKIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATRELNIKMPIIV 385
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
RL+GTNV E K ++ +SKL ++ DLDEAA L
Sbjct: 386 RLQGTNVNEAKELIKKSKLRILPKDDLDEAAML 418
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + + +P++VRL+GTNV E K ++ +SKL ++ DLDEAA
Sbjct: 367 AEGIIQATRELNIKMPIIVRLQGTNVNEAKELIKKSKLRILPKDDLDEAA 416
>gi|425782589|gb|EKV20488.1| Succinyl-CoA synthetase beta subunit, putative [Penicillium
digitatum Pd1]
Length = 443
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/391 (44%), Positives = 236/391 (60%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A I K + + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 60 AEEAEAIAKSIGGGDLVIKAQVLAGGRGKGQFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT G N V + + RE Y ++ DR GPV++ S GG DIE VA ++
Sbjct: 120 LVTKQTGAGGRICNSVYICERKFARREFYLAVLLDRTTRGPVIVSSSQGGMDIEAVAKES 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+H G+T+ +A+ IA L F Q I +
Sbjct: 180 PDAITTTPIDIHVGVTDEIARTIATDLGFS----------------------EQCIEE-- 215
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A + +Q L+ F+ DATQLEINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 216 ---------AKSTIQNLYKCFMERDATQLEINPLSETSDHQVLAMDAKLGFDDNAEFRQK 266
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
FS +VS+ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 267 EAFSWRDVSQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFL 326
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V + VN+FGGIV C IA+GL+N + L P+V
Sbjct: 327 DVGGGATPAAIKSAFELITSDPKVSAVFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVA 386
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ +++++S L + DL AA
Sbjct: 387 RLQGTNMEQAHKLINDSGLKIFSIEDLQNAA 417
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 368 AQGLINVVQEMNLRTPIVARLQGTNMEQAHKLINDSGLKIFSIEDLQNAA 417
>gi|281361395|ref|NP_001163558.1| skpA associated protein, isoform C [Drosophila melanogaster]
gi|281361397|ref|NP_001163559.1| skpA associated protein, isoform D [Drosophila melanogaster]
gi|16197833|gb|AAL13560.1| GH10480p [Drosophila melanogaster]
gi|272476881|gb|ACZ94855.1| skpA associated protein, isoform C [Drosophila melanogaster]
gi|272476882|gb|ACZ94856.1| skpA associated protein, isoform D [Drosophila melanogaster]
Length = 503
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 187/425 (44%), Positives = 254/425 (59%), Gaps = 37/425 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++ + A +I L V+KAQ+LAGGRG G F NG K GV + Q + KMI
Sbjct: 63 KNGKEANDIATKLKTDNLVLKAQVLAGGRGKGTFKNGLKGGVRVVYDPQTAEELSSKMID 122
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G KVMVA+ RE YF ++ +R NGPV+I S GG DIE VAA
Sbjct: 123 QLLVTKQTGAAGRICKKVMVAERKFPRREFYFAVMMERAFNGPVLIASKEGGVDIEEVAA 182
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P + PID+ G+T A+ I + GD T VQ L NL
Sbjct: 183 SSPDAILYEPIDIGTGLTSEQAEKIVKKVGLGGD---GEDTHVQMLLNL----------- 228
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVI-SVDAKINFDDNAEF 269
++LF+ DA +EINP E ++DAK+ FDDNAEF
Sbjct: 229 -------------------YDLFVKKDALLVEINPYAEDAMSGCFFALDAKLRFDDNAEF 269
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK +F+ + ++ DP+EV+A+KYNLNY+ +DG IGC+VNGAGLAMATMDIIKL+GGEPA
Sbjct: 270 RQKELFALRDWTQEDPKEVEAAKYNLNYIALDGTIGCMVNGAGLAMATMDIIKLYGGEPA 329
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG E++ AF+II+SD V CILVN+FGGI+ C IA+G+++A K L++P
Sbjct: 330 NFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIISATKDLNLNMP 389
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL-VNACKSFKLS--IPLVVRLEGTN 446
+VVRL+GT V+E + ++ S L ++ DLD+AA L V+ + KL+ + + V E +
Sbjct: 390 VVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAVHLAQIVKLAREMKMDVNFEIPD 449
Query: 447 VQEGK 451
Q+GK
Sbjct: 450 AQKGK 454
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 374 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAV 427
>gi|340726331|ref|XP_003401513.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Bombus terrestris]
Length = 449
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 238/393 (60%), Gaps = 34/393 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + DL K+ V+KAQ+LAGGRG GHF SGV ++ + +M+G
Sbjct: 65 ADEAAKLAADLKTKDIVLKAQVLAGGRGKGHFKGTSISGVKMCETPEEAKKLASQMLGKL 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA
Sbjct: 125 LITKQTGEAGRICNAVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + PID+H+GIT+ A IA L Q + D++
Sbjct: 185 PSAIMYEPIDIHKGITKEQADRIAVKLGLQ------------------------NVKDYI 220
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ + L+ +FL DA LE+NPL E E ++D K FDDNAEFRQK
Sbjct: 221 ----------SNIIMNLYKMFLKKDALLLEVNPLAEDVNGEYFALDCKCRFDDNAEFRQK 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + S+ D +EV+A+KY+LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFL
Sbjct: 271 ELFSLRDWSQEDTKEVEAAKYDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG + ++ +AF+II+SDS V +LVN+FGGI+ C IA+G++ A K L IP+VV
Sbjct: 331 DVGGGASTSAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVV 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
RL+GTNV E K ++ + L ++ DLDEAA +
Sbjct: 391 RLQGTNVDEAKALIANAGLKIVPIDDLDEAARV 423
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 372 AEGIIAATKELSLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAA 421
>gi|115388833|ref|XP_001211922.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Aspergillus terreus NIH2624]
gi|114196006|gb|EAU37706.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Aspergillus terreus NIH2624]
Length = 443
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 232/391 (59%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 60 AEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR PV++ S GG DIE VA +
Sbjct: 120 LITKQTGAAGRLCNSVYICERKFARREFYLAVLMDRASQSPVIVASSQGGMDIEAVAKEN 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+ G+T+ +A IA L F +A +QKL+ +F+
Sbjct: 180 PEAIITTPIDIKTGVTDEIALKIATELGFSEQCIPEAKDTIQKLYKVFMEK--------- 230
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 231 ------------------------DATQIEINPLSETSDHKVMAMDAKLGFDDNAEFRQK 266
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 267 EVFSWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFL 326
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N L IP+V
Sbjct: 327 DVGGGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMGLRIPIVA 386
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ +++L+ES L + DL AA
Sbjct: 387 RLQGTNMEQAQKLLNESGLKIFSIEDLQSAA 417
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L IP+V RL+GTN+++ +++L+ES L + DL AA
Sbjct: 368 AQGLINVVNEMGLRIPIVARLQGTNMEQAQKLLNESGLKIFSIEDLQSAA 417
>gi|340515566|gb|EGR45819.1| beta subunit of GDP-forming succinate-CoA ligase [Trichoderma
reesei QM6a]
Length = 446
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 181/414 (43%), Positives = 247/414 (59%), Gaps = 34/414 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + +++ + VIKAQ+LAGGRG G FDNG K GV + + ++MIGHK
Sbjct: 63 AAEAKKVAEEIGTGDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPYEAEMFAQQMIGHK 122
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G + V + + RE Y I+ DR GPV++ S GG DIE VA +
Sbjct: 123 LITKQTGAGGRLCSSVYICERKFARREFYLAILMDRASQGPVIVSSSQGGMDIETVAKEQ 182
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID+++G+T+ +A+ IA L F Q I D
Sbjct: 183 PDAITTTYIDINKGVTDDIARGIATGLGFS----------------------EQCIED-- 218
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +QKL+ +F+ DATQ+EINPL ET + +V+ +DAK FDDNA+FRQK
Sbjct: 219 ---------AKDTIQKLYKIFVERDATQIEINPLSETSDHQVLCMDAKFGFDDNADFRQK 269
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + ++ DP EV A+K NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 270 EVFEWRDTTQEDPDEVRAAKSNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 329
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+ ++ L IP++
Sbjct: 330 DVGGGATPAAIREAFELITSDPKVSAIFVNIFGGIVRCDAIATGLIRTVEALNLKIPIIA 389
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACKSFKLSIPLVVRLEGT 445
RL+GTNV+ +I++ES L + DL AA V K K++ + V +E T
Sbjct: 390 RLQGTNVELAHQIINESGLKIFSIDDLQSAAEKAVQLSKVVKMARDIDVGVEFT 443
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ ++ L IP++ RL+GTNV+ +I++ES L + DL AA
Sbjct: 371 ATGLIRTVEALNLKIPIIARLQGTNVELAHQIINESGLKIFSIDDLQSAA 420
>gi|425777820|gb|EKV15976.1| Succinyl-CoA synthetase beta subunit, putative [Penicillium
digitatum PHI26]
Length = 738
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 175/391 (44%), Positives = 236/391 (60%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A I K + + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 355 AEEAEAIAKSIGGGDLVIKAQVLAGGRGKGQFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 414
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT G N V + + RE Y ++ DR GPV++ S GG DIE VA ++
Sbjct: 415 LVTKQTGAGGRICNSVYICERKFARREFYLAVLLDRTTRGPVIVSSSQGGMDIEAVAKES 474
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+H G+T+ +A+ IA L F Q I +
Sbjct: 475 PDAITTTPIDIHVGVTDEIARTIATDLGFS----------------------EQCIEE-- 510
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A + +Q L+ F+ DATQLEINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 511 ---------AKSTIQNLYKCFMERDATQLEINPLSETSDHQVLAMDAKLGFDDNAEFRQK 561
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
FS +VS+ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 562 EAFSWRDVSQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFL 621
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V + VN+FGGIV C IA+GL+N + L P+V
Sbjct: 622 DVGGGATPAAIKSAFELITSDPKVSAVFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVA 681
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ +++++S L + DL AA
Sbjct: 682 RLQGTNMEQAHKLINDSGLKIFSIEDLQNAA 712
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 663 AQGLINVVQEMNLRTPIVARLQGTNMEQAHKLINDSGLKIFSIEDLQNAA 712
>gi|336468083|gb|EGO56246.1| hypothetical protein NEUTE1DRAFT_117246 [Neurospora tetrasperma
FGSC 2508]
gi|350289677|gb|EGZ70902.1| putative beta-succinyl CoA synthetase precursor [Neurospora
tetrasperma FGSC 2509]
Length = 447
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 178/406 (43%), Positives = 246/406 (60%), Gaps = 41/406 (10%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A I K + ++ VIKAQ+LAGGRG G FDNG K GV + + E+MI
Sbjct: 61 ARTGAEAEAIAKQIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMI 120
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GHKLITKQT G + V + + RE Y ++ DR GPV++ S GG DIE VA
Sbjct: 121 GHKLITKQTGAQGRLCSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVA 180
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+ P + T ID++ G+T+ +A+DIA L F ++ E
Sbjct: 181 KENPEAIHTTYIDINVGVTDEMARDIATKLGF-----SEQCVE----------------- 218
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+A +QKL+ +F DATQ+EINPL ET + +V+++DAK FDDNA+F
Sbjct: 219 -----------EAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVMAMDAKFGFDDNADF 267
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ ++F + ++ DP EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PA
Sbjct: 268 RQPDVFKLRDTTQEDPDEVRAAQAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPA 327
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+N KS L IP
Sbjct: 328 NFLDVGGGATPAAIREAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIP 387
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
++ RL+GTN++ ++++++S + + DL AA KS +LS
Sbjct: 388 IIARLQGTNMEAARQLINDSGMKIFSIDDLQSAAE-----KSVQLS 428
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N KS L IP++ RL+GTN++ ++++++S + + DL AA
Sbjct: 372 AHGLINTVKSLDLKIPIIARLQGTNMEAARQLINDSGMKIFSIDDLQSAA 421
>gi|157130278|ref|XP_001661867.1| succinyl-coa synthetase beta chain [Aedes aegypti]
gi|108871927|gb|EAT36152.1| AAEL011746-PA [Aedes aegypti]
Length = 449
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 182/396 (45%), Positives = 250/396 (63%), Gaps = 37/396 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A I K LN K V+KAQ+LAGGRG G F NG K GV + Q+ I KMI
Sbjct: 60 AQDAEKIAKGLNTKNLVLKAQVLAGGRGKGTFKNGLKGGVRVVFSPQEARDISGKMIKQL 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT G N VMVA+ RE YF ++ +R NGPV+I S GG +IE VAA+
Sbjct: 120 LVTKQTGAAGRICNSVMVAERKFPRREFYFAVMMERAFNGPVLIASSQGGVNIEEVAAEN 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + PID+ G+ + AQ +A +A+K+ L
Sbjct: 180 PDAIVYEPIDIKAGLQK--AQALA---------------------------IAKKVG--L 208
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVE---TDEREVISVDAKINFDDNAEF 269
E D + A + +++LF+ DA +EINP E + ++DAK+ FDDNAEF
Sbjct: 209 E---DHAEETAKMLLNMYDLFVKKDALLIEINPYAEDAGETSSQYFALDAKMRFDDNAEF 265
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK++F++ ++S+ D +EV+ASK++LNY+ +DG+IGCLVNGAGLAMATMDIIKLHGG+PA
Sbjct: 266 RQKDLFAKRDLSQEDSKEVEASKFDLNYIALDGSIGCLVNGAGLAMATMDIIKLHGGDPA 325
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG + +++ +AFRII+SD V ILVN+FGGI+ C IA+G++ A K + +P
Sbjct: 326 NFLDVGGGASVKAVKEAFRIITSDPKVHAILVNIFGGIMRCDVIAEGIIQATKELNIKMP 385
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
++VRL+GTNV E K ++ +SKL ++ DLDEAA L
Sbjct: 386 IIVRLQGTNVNEAKELIKKSKLRILPKDDLDEAAML 421
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K + +P++VRL+GTNV E K ++ +SKL ++ DLDEAA
Sbjct: 370 AEGIIQATKELNIKMPIIVRLQGTNVNEAKELIKKSKLRILPKDDLDEAA 419
>gi|82225355|sp|Q9YI37.1|SUCB1_COLLI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=ATP-specific succinyl-CoA
synthetase subunit beta; AltName: Full=Succinyl-CoA
synthetase beta-A chain; Short=SCS-betaA; Flags:
Precursor
gi|3821927|gb|AAC69705.1| ATP-specific succinyl-CoA synthetase beta subunit [Columba livia]
Length = 413
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 184/397 (46%), Positives = 242/397 (60%), Gaps = 36/397 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A I K++ K+ VIKAQ+LAGGRG G F+ G K GV + ++ + +MI
Sbjct: 27 ARTPDEAYKIAKEIGSKDLVIKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKAVSSRMI 86
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G KL TKQT + G N+V V + RE YF I +R GPV+I S GG +IE+VA
Sbjct: 87 GKKLFTKQTGEKGRICNQVFVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVA 146
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+ P + PID+ +GI + A LAQK+
Sbjct: 147 AENPDAIIKEPIDIVEGIKKEQA-----------------------------VRLAQKMG 177
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
F +L +AA + KL+NLFL DAT +EINP+VE V+ +DAKINFD N+ +
Sbjct: 178 ----FPSNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAY 233
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK IF + ++ D R+ A+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PA
Sbjct: 234 RQKKIFDMQDWTQEDERDRQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPA 293
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K L IP
Sbjct: 294 NFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVVAVKDLDLKIP 353
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+VVRL+GT V + K ++ S L ++ DLDEAA +V
Sbjct: 354 VVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMV 390
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 338 AQGIVVAVKDLDLKIPVVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 391
>gi|449280343|gb|EMC87670.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial,
partial [Columba livia]
Length = 431
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 184/397 (46%), Positives = 242/397 (60%), Gaps = 36/397 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A I K++ K+ VIKAQ+LAGGRG G F+ G K GV + ++ + +MI
Sbjct: 45 ARTPDEAYKIAKEIGSKDLVIKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKAVSSRMI 104
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G KL TKQT + G N+V V + RE YF I +R GPV+I S GG +IE+VA
Sbjct: 105 GKKLFTKQTGEKGRICNQVFVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVA 164
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+ P + PID+ +GI + A LAQK+
Sbjct: 165 AENPDAIIKEPIDIVEGIKKEQA-----------------------------VRLAQKMG 195
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
F +L +AA + KL+NLFL DAT +EINP+VE V+ +DAKINFD N+ +
Sbjct: 196 ----FPSNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAY 251
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK IF + ++ D R+ A+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PA
Sbjct: 252 RQKKIFDMQDWTQEDERDRQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPA 311
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K L IP
Sbjct: 312 NFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVVAVKDLDLKIP 371
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+VVRL+GT V + K ++ S L ++ DLDEAA +V
Sbjct: 372 IVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMV 408
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 356 AQGIVVAVKDLDLKIPIVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 409
>gi|401625594|gb|EJS43594.1| lsc2p [Saccharomyces arboricola H-6]
Length = 427
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 174/389 (44%), Positives = 233/389 (59%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN KE VIKAQ L GGRG GHFD G+KSGVH Q +M+ H LITKQT
Sbjct: 66 KKLNTKELVIKAQALTGGRGKGHFDTGYKSGVHMIEGPQQAEDAAREMLNHNLITKQTGA 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA KTP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAEKTPDAIKKFT 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F +++ +AA V L+ +F+
Sbjct: 186 IETSEGLSPEMAKDVAKSLGFSPEVQDEAAETVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +V+ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKVMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422
>gi|156546290|ref|XP_001605984.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Nasonia vitripennis]
Length = 450
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 171/390 (43%), Positives = 239/390 (61%), Gaps = 34/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + DLN K+ V+KAQ+LAGGRG GHF G SGV ++ + +M+G L+T
Sbjct: 69 AAKLATDLNTKDIVLKAQVLAGGRGKGHFKGGNVSGVKMCETPEEAKQLASQMLGKLLVT 128
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA P
Sbjct: 129 KQTGEAGRICNAVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATNPQA 188
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+++GIT+ A IA L +
Sbjct: 189 IMYEPIDINKGITKDQADRIAVKLGLE--------------------------------- 215
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++K + + +++LF+ DA LE+NPL E E ++D K FDDNAEFRQK++F
Sbjct: 216 -NVKEYISKMIMNMYSLFVKKDALLLEVNPLAEDINGEYFALDCKCRFDDNAEFRQKDLF 274
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ DP+EV+A+K+ LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFLDVG
Sbjct: 275 ALRDWTQEDPKEVEAAKFELNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 334
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG ++ +AF+II+SDS V +LVN+FGGI+ C IA+G++ A K L IP+VVRL+
Sbjct: 335 GGATASAVKEAFKIITSDSKVHALLVNIFGGIMRCDVIAEGIIAATKELDLKIPVVVRLQ 394
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASL 425
GTNV E K ++ + L ++ DLDEAA +
Sbjct: 395 GTNVDEAKALIANAGLKIVPVDDLDEAARI 424
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 373 AEGIIAATKELDLKIPVVVRLQGTNVDEAKALIANAGLKIVPVDDLDEAA 422
>gi|367054864|ref|XP_003657810.1| hypothetical protein THITE_2123869 [Thielavia terrestris NRRL 8126]
gi|347005076|gb|AEO71474.1| hypothetical protein THITE_2123869 [Thielavia terrestris NRRL 8126]
Length = 441
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 173/383 (45%), Positives = 234/383 (61%), Gaps = 33/383 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K + + VIKAQ+LAGGRG G FDNG K GV + + E+MIGHKLITKQT
Sbjct: 70 KQIGTDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGA 129
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G N V + + RE Y ++ DR GPV++ S GG DIE VA + P + T
Sbjct: 130 AGRLCNAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPDAITTTY 189
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID++ G+T+ +A+ IA L F Q I D
Sbjct: 190 IDINVGVTDEIARGIATKLGFS----------------------EQCIED---------- 217
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
A +QKL+ +FL DATQ+EINPL ET + +V+ +DAK FDDNA+FRQK +FS +
Sbjct: 218 -AKDTIQKLYKIFLEKDATQIEINPLSETSDHKVMCMDAKFGFDDNADFRQKEVFSWRDT 276
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ DP EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFLDVGGG
Sbjct: 277 TQEDPEEVRAAEAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVGGGATP 336
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
+I +AF +I+SD V I VN+FGGIV C IA GL+N +S L IP++ RL+GTN++
Sbjct: 337 AAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVQSLNLKIPIIARLQGTNME 396
Query: 401 EGKRILDESKLPLIFASDLDEAA 423
+ +++++S + + DL AA
Sbjct: 397 QAHQLINDSGMKIFSIDDLQSAA 419
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N +S L IP++ RL+GTN+++ +++++S + + DL AA
Sbjct: 370 AHGLINTVQSLNLKIPIIARLQGTNMEQAHQLINDSGMKIFSIDDLQSAA 419
>gi|322709852|gb|EFZ01427.1| putative succinyl-CoA ligase [Metarhizium anisopliae ARSEF 23]
Length = 447
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 177/403 (43%), Positives = 243/403 (60%), Gaps = 38/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K++ ++ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHK
Sbjct: 64 AEEAKAVAKEIGTEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFAQQMIGHK 123
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y I+ DR PV++ S GG DIE VA ++
Sbjct: 124 LITKQTGAGGRLCNAVYICERKFARREFYLAILMDRASQSPVIVSSSQGGMDIETVAKES 183
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T +D++ G+T+ +A+ IA L F Q + D
Sbjct: 184 PDAIITTYVDINTGVTDDIARGIATKLGFS----------------------EQCVED-- 219
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +QKL+ +FL D+TQ+EINPL ET++ +V+ +DAK FDDNA+FRQK
Sbjct: 220 ---------AKDTIQKLYKIFLERDSTQIEINPLSETNDHQVLCMDAKFGFDDNADFRQK 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + S+ DP EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 271 EVFEWRDTSQEDPDEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+ ++ L IP++
Sbjct: 331 DVGGGATPAAIQEAFELITSDPKVTAIFVNIFGGIVRCDHIATGLIKTVENLNLKIPIIA 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
RL+GTNV++ +I++ES + + DL AA KS +LS
Sbjct: 391 RLQGTNVEQAHKIINESGMKIFSIDDLQSAAE-----KSVQLS 428
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ ++ L IP++ RL+GTNV++ +I++ES + + DL AA
Sbjct: 372 ATGLIKTVENLNLKIPIIARLQGTNVEQAHKIINESGMKIFSIDDLQSAA 421
>gi|387018850|gb|AFJ51543.1| Succinyl-CoA ligase [Crotalus adamanteus]
Length = 467
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/391 (45%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A N+ K + K+ V+KAQ+LAGGRG G F+ G K GV + ++ I KMIG KL T
Sbjct: 87 AYNVAKKIGAKDLVVKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKEISSKMIGKKLYT 146
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V + + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 147 KQTGEKGRICNQVFICERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAENPDA 206
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 207 IAKEPIDIVEGIKKEQA-----------------------------IRLAQKMG----FP 233
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +AA + K++NLF+ DAT +EINP+VE V+ +DAKINFD N+ +RQ+ IF
Sbjct: 234 ANLVDEAAENMIKIYNLFIKFDATMVEINPMVEDSTGIVMCMDAKINFDSNSAYRQQKIF 293
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +L+Y+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 294 DLQDWTQEDQRDRDAAKADLSYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 353
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G++ A K L IP+VVRL+
Sbjct: 354 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIIMAVKDLDLKIPIVVRLQ 413
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 414 GTRVDDAKALITDSGLKILACDDLDEAAKMV 444
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 392 AQGIIMAVKDLDLKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 445
>gi|367035346|ref|XP_003666955.1| hypothetical protein MYCTH_2312147 [Myceliophthora thermophila ATCC
42464]
gi|347014228|gb|AEO61710.1| hypothetical protein MYCTH_2312147 [Myceliophthora thermophila ATCC
42464]
Length = 446
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 179/406 (44%), Positives = 243/406 (59%), Gaps = 34/406 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K + + VIKAQ+LAGGRG G FDNG K GV + + E+MIGHKLITKQT
Sbjct: 71 KSIGTDDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGA 130
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G N V + + RE Y ++ DR GPV++ S GG DIE VA + P + T
Sbjct: 131 AGRLCNAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIETVAKENPDAITTTY 190
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID++ G+T+ +A+ IA L F Q I D
Sbjct: 191 IDINVGVTDEIARGIATKLGFS----------------------EQCIED---------- 218
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
A ++ L+ +FL DATQ+EINPL ET + +V+ +DAK FDDNAEFRQK +FS +
Sbjct: 219 -AKDTIKNLYRIFLEKDATQIEINPLSETSDHKVMCMDAKFGFDDNAEFRQKEVFSWRDT 277
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ DP EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFLDVGGG
Sbjct: 278 TQEDPEEVRAAEAGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVGGGATP 337
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
+I +AF +I+SD V I VN+FGGIV C IA GL+N KS L IP++ RL+GTN++
Sbjct: 338 AAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIARLQGTNME 397
Query: 401 EGKRILDESKLPLIFASDLDEAAS-LVNACKSFKLSIPLVVRLEGT 445
+ +++++S + + DL AA V K K++ + V +E T
Sbjct: 398 QAHQLINDSGMKIFSIDDLQSAAERAVQLSKVVKMARDIDVGVEFT 443
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N KS L IP++ RL+GTN+++ +++++S + + DL AA
Sbjct: 371 AHGLINTVKSLDLKIPIIARLQGTNMEQAHQLINDSGMKIFSIDDLQSAA 420
>gi|324516298|gb|ADY46487.1| Succinyl-CoA ligase ADP-forming subunit beta, partial [Ascaris
suum]
Length = 436
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/387 (45%), Positives = 238/387 (61%), Gaps = 34/387 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K + K+YV+KAQILAGGRG G+FD+G + GV + M+G LITKQT
Sbjct: 60 KKIGGKDYVVKAQILAGGRGKGYFDSGLQGGVQVVYTPDEAREKASLMLGAHLITKQTTH 119
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G +VMV K + RE YF I DR H GPVV+ S GG +IE VAA P+ + T+P
Sbjct: 120 RGNLCERVMVCKRLFTRREYYFSITLDRKHAGPVVVASSHGGVNIEEVAATDPNAIITVP 179
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I++ QG+TE A +IAD L F+GD K
Sbjct: 180 INISQGMTEENAIEIADKLG---------------------------------FQGDCKT 206
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+A QKL+ LF DAT LEINP+ E +V +D KI D NA++RQ+++F +
Sbjct: 207 QAVDIFQKLYGLFAKSDATLLEINPMAEDVSGDVYCMDCKILVDTNAQYRQEDLFKLQDR 266
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
S+ D E+ A+ +LNY+ ++G+IGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG
Sbjct: 267 SQEDELEMRAAAAHLNYIRLEGDIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGATV 326
Query: 341 ESIIQAFRIISSDSN-VKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNV 399
+ + +AFRII+ D + V ILVN+FGGI+ C IA+G++NA + L IP+VVRL+GT V
Sbjct: 327 QQVTEAFRIITDDKHQVHAILVNIFGGIMRCDVIAQGIINAARELNLKIPIVVRLQGTKV 386
Query: 400 QEGKRILDESKLPLIFASDLDEAASLV 426
+ K ++ +S++ ++ +LDEAA LV
Sbjct: 387 DDAKALIAQSEMRILACDNLDEAARLV 413
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++NA + L IP+VVRL+GT V + K ++ +S++ ++ +LDEAA +
Sbjct: 361 AQGIINAARELNLKIPIVVRLQGTKVDDAKALIAQSEMRILACDNLDEAARLVV 414
>gi|194741642|ref|XP_001953298.1| GF17693 [Drosophila ananassae]
gi|190626357|gb|EDV41881.1| GF17693 [Drosophila ananassae]
Length = 513
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/425 (43%), Positives = 250/425 (58%), Gaps = 39/425 (9%)
Query: 7 QQIANF------SYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRG 60
QQ+ N SY + S + + ++ + A +I L V+KAQ+LAGGRG
Sbjct: 33 QQLRNLNVQEHVSYSLLNESKIPTPRFAVAKNGKEAHDIATKLKTDNLVLKAQVLAGGRG 92
Query: 61 LGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRET 120
G F NG K GV + + I KMI LITKQT G KVMVA+ RE
Sbjct: 93 KGTFKNGLKGGVRVVYDPKTAEEISSKMIDQLLITKQTGAAGRLCKKVMVAERKFPRREF 152
Query: 121 YFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLE 180
YF ++ +R NGPV+I S GG DIE VAA +P + PID+ G+T AQ I +
Sbjct: 153 YFAVMMERAFNGPVLIASKEGGVDIEEVAATSPEAILYEPIDIDTGLTSEQAQKIIQKVG 212
Query: 181 FQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQ 240
G+ + + V+ L NL + LF++ DA
Sbjct: 213 LGGEGEEQ---HVEMLLNL------------------------------YKLFVNKDALL 239
Query: 241 LEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGM 300
+EINP E ++DAK+ FDDNAEFRQK +F+ + ++ DP+EV+A+KYNLNY+ +
Sbjct: 240 VEINPYAEDALTGFFALDAKLRFDDNAEFRQKELFALRDWTQEDPKEVEAAKYNLNYIAL 299
Query: 301 DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCIL 360
DG IGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG E++ AF+II+SD V CIL
Sbjct: 300 DGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKVLCIL 359
Query: 361 VNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLD 420
VN+FGGI+ C IA+G+++A K L++P+VVRL+GT V+E + ++ S L ++ DLD
Sbjct: 360 VNIFGGIMRCDVIAEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLD 419
Query: 421 EAASL 425
+AA L
Sbjct: 420 KAADL 424
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +++A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIISATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKILARDDLDKAADLAV 426
>gi|296412464|ref|XP_002835944.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629741|emb|CAZ80101.1| unnamed protein product [Tuber melanosporum]
Length = 442
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + KD+ ++ VIKAQ+LAGGRG G FDNG K GV + + +MIG K
Sbjct: 59 AEEAEAVAKDIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIFSPAEAKFFASQMIGQK 118
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G V + + RE Y I+ DR GP+++ S GG DIE VA +
Sbjct: 119 LITKQTGPGGKLCTGVYICERKFARREFYLAILMDRATQGPIIVSSSQGGMDIEGVAKED 178
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+H+G+T+ +A +A L F +A VQ + N
Sbjct: 179 PDAIVTTPIDIHKGVTDEVATKVATSLGFSEQCIPEA---VQTIKN-------------- 221
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
L+ +F+ DATQ+EINPL ET++ +V+++DAK+ FDDNA+FRQ+
Sbjct: 222 ----------------LYKVFVEKDATQIEINPLSETNDHKVLAMDAKMGFDDNADFRQE 265
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
IFS + ++ DP EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 266 EIFSWRDKTQEDPDEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 325
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GGG ++I +AF++I++D V I VN+FGGIV C IAKGL+ ++ L IP+V
Sbjct: 326 DCGGGATAQAIERAFQLITNDPKVTAIFVNIFGGIVRCDAIAKGLIATVENMNLRIPIVA 385
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+QE +R++D S L + DL +AA
Sbjct: 386 RLQGTNMQEAQRLIDGSGLKIFSFEDLQDAA 416
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ ++ L IP+V RL+GTN+QE +R++D S L + DL +AA
Sbjct: 367 AKGLIATVENMNLRIPIVARLQGTNMQEAQRLIDGSGLKIFSFEDLQDAA 416
>gi|164656989|ref|XP_001729621.1| hypothetical protein MGL_3165 [Malassezia globosa CBS 7966]
gi|159103514|gb|EDP42407.1| hypothetical protein MGL_3165 [Malassezia globosa CBS 7966]
Length = 426
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/381 (44%), Positives = 236/381 (61%), Gaps = 32/381 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K + K V+KAQ+LAGGRG GHFDNG + GVH + ++ + KM+G KLITKQT
Sbjct: 67 KKFDGKPVVVKAQVLAGGRGKGHFDNGLQGGVHLVKSAEEARDLTGKMVGSKLITKQTGA 126
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G N VM+A++ E Y I+ DR+ PV+I S GG IE VA + P + T P
Sbjct: 127 AGRVCNSVMIAEARTPKHEYYVAILNDRVRQLPVLIASNQGGMSIEEVAKENPDAIITTP 186
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID +G+ A+ +A L F G+ + +
Sbjct: 187 IDYTKGLDMETAKQVAHKLGFSGEQQ--------------------------------EN 214
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+AA KL+ LF DATQ+EINPL E+++ V+ +DAK+ FD++A+FRQK +F ++
Sbjct: 215 EAADTFVKLYKLFRERDATQVEINPLAESEDGAVLCMDAKLGFDEHADFRQKEVFEMRDL 274
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ DP EV AS+Y LN++ +DGNIGCLVNGAGLAMAT+D++ L+GG+PANFLDVGGG N
Sbjct: 275 TQEDPSEVRASRYGLNFIKLDGNIGCLVNGAGLAMATLDLLSLNGGKPANFLDVGGGANA 334
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E++ +AF I+ V+ ILVN+FGGI+ C IA+G++ A K +L IPLVVRL+GT Q
Sbjct: 335 EAVKKAFEIVLEGEGVRAILVNIFGGIMRCDVIAEGIIKATKEMELKIPLVVRLQGTKEQ 394
Query: 401 EGKRILDESKLPLIFASDLDE 421
E K ++ +S L + +DLDE
Sbjct: 395 EAKELIRQSGLKIQAYNDLDE 415
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A ++ A K +L IPLVVRL+GT QE K ++ +S L + +DLDE
Sbjct: 368 AEGIIKATKEMELKIPLVVRLQGTKEQEAKELIRQSGLKIQAYNDLDE 415
>gi|145346224|ref|XP_001417593.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577820|gb|ABO95886.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 420
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/386 (46%), Positives = 245/386 (63%), Gaps = 37/386 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
E V+K+QILAGGRGLG F +GF+ GVH + KM+G L+TKQ+ G VN
Sbjct: 69 EVVVKSQILAGGRGLGTFASGFEGGVHAVAKTR-ARETAAKMLGGTLVTKQSGPAGKPVN 127
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
V VA+ + +TRE YF I DR GP+VI S GGT IE++A P + + +D+ +G
Sbjct: 128 VVYVAEKMTLTREMYFAITLDRASAGPLVIASAEGGTSIEDLAQSHPEKIIKMRLDIERG 187
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+T++ A ++ V++L L K D +AA ++
Sbjct: 188 MTKTQADEL-----------------VKRLGIL-------KHVD----------EAAKQL 213
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
L+ F D T +E+NPL E + V++ DAK+NFDDNAE+RQ +FS + S+ DPR
Sbjct: 214 MGLYETFSKTDCTMIEVNPLAEDQDGRVVAADAKLNFDDNAEYRQSELFSLRDTSQEDPR 273
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV ASK++LNY+G+DGNIGC+VNGAGLAMATMDII+L+GG PANFLDVGG +EE +++A
Sbjct: 274 EVQASKFDLNYIGLDGNIGCMVNGAGLAMATMDIIQLYGGSPANFLDVGGNASEEQVVEA 333
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F+I+++D V+ ILVN+FGGI+ C IA G+V A K L +PL+VRLEGTNV+ G +IL
Sbjct: 334 FKILTADPKVQAILVNIFGGIMKCDVIAAGIVAAAKQVDLKVPLIVRLEGTNVEAGNKIL 393
Query: 407 DESKLPLIFASDLDEAASLVNACKSF 432
S + ++ A DLD+AA AC S
Sbjct: 394 KSSGMTIVTAEDLDDAAQ--KACASL 417
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 430 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSF 480
K L +PL+VRLEGTNV+ G +IL S + ++ A DLD+AA AC S
Sbjct: 369 KQVDLKVPLIVRLEGTNVEAGNKILKSSGMTIVTAEDLDDAAQ--KACASL 417
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
K L +PL+VRLEGTNV+ G +IL S + ++ A DLD+AA
Sbjct: 369 KQVDLKVPLIVRLEGTNVEAGNKILKSSGMTIVTAEDLDDAAQ 411
>gi|350423917|ref|XP_003493630.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Bombus impatiens]
Length = 449
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 239/393 (60%), Gaps = 34/393 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + DL K+ V+KAQ+LAGGRG GHF SGV ++ + +M+G
Sbjct: 65 ADEAAKLAADLKTKDIVLKAQVLAGGRGKGHFKGTSISGVKMCETPEEAKKLASQMLGKL 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA
Sbjct: 125 LITKQTGEAGRICNAVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + PID+H+GIT+ A I V KL Q + D++
Sbjct: 185 PSAIMYEPIDIHKGITKEQADRI-----------------VVKLG-------LQNVKDYI 220
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ + L+ +FL DA LE+NPL E E ++D K FDDNAEFRQK
Sbjct: 221 ----------SNIIMNLYKMFLKKDALLLEVNPLAEDVNGEYFALDCKCRFDDNAEFRQK 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + S+ D +EV+A+KY+LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFL
Sbjct: 271 ELFSLRDWSQEDTKEVEAAKYDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG + ++ +AF+II+SDS V +LVN+FGGI+ C IA+G++ A K L IP+VV
Sbjct: 331 DVGGGASTSAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVV 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
RL+GTNV E K ++ + L ++ DLDEAA +
Sbjct: 391 RLQGTNVDEAKALIANAGLKIVPIDDLDEAARV 423
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 372 AEGIIAATKELSLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAA 421
>gi|393218825|gb|EJD04313.1| succinate-CoA ligase [Fomitiporia mediterranea MF3/22]
Length = 419
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 246/397 (61%), Gaps = 33/397 (8%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDI 81
+ + V + A + K+ K+ VIKAQ+LAGGRG G FDNG + GVH N+ +
Sbjct: 41 IATPKSVAAKSPEEAFEVAKNFGTKDLVIKAQVLAGGRGKGKFDNGLQGGVHIINSPEQA 100
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ KMIG KLITKQT + G N VM+A+ + E Y ++ DR GPV++ S G
Sbjct: 101 KDLAGKMIGSKLITKQTGEKGRICNAVMLAERRDAAHEYYIAVLNDRASQGPVLVASNQG 160
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G +IE VAAK P+ + T PID +G+++ A +A L F+
Sbjct: 161 GMNIEEVAAKDPNAIITTPIDYAKGLSDEEALGVAKKLGFK------------------- 201
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
S A+K +AA Q L+ +F DATQ+EINPL ET + ++ +DAK
Sbjct: 202 SEQAEK-------------EAAKTFQNLYKIFKQKDATQIEINPLGETADGHILCMDAKF 248
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
FDDNA FRQ++I++ ++S+ +P EV+A K++LN++ +DGN+GCLVNGAGLAMATMD++
Sbjct: 249 GFDDNASFRQQDIYALRDISQEEPSEVEAQKHDLNFIKLDGNVGCLVNGAGLAMATMDVL 308
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
LHGG+PANFLDVGGG E++ +AF I+ +D VK I +N+FGGI+ C IA+G++ A
Sbjct: 309 SLHGGQPANFLDVGGGATPETVKKAFEILLADPAVKSIFINIFGGIMRCDYIAEGVIKAT 368
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASD 418
K L++PL+VRL+GT E K+++ +S L IFA D
Sbjct: 369 KDLALNVPLIVRLKGTKEAEAKQLIKDSGLK-IFAFD 404
>gi|255577916|ref|XP_002529830.1| succinyl-CoA synthetase beta chain, putative [Ricinus communis]
gi|223530658|gb|EEF32531.1| succinyl-CoA synthetase beta chain, putative [Ricinus communis]
Length = 425
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/381 (48%), Positives = 241/381 (63%), Gaps = 38/381 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
E V+K+QILAGGRGLG F NGF+ GVH + + KM+G L+TKQT G V+
Sbjct: 70 ELVVKSQILAGGRGLGKFKNGFEGGVHIVKADKAVETA-GKMLGQILVTKQTGPQGKVVS 128
Query: 107 KVMVAKSVNITRETYFCIVQDRLHN---GPVVIIS-PSGGTDIENVAAKTPHLVKTIPID 162
K ++ + + D L G ++II+ GGT IE++A K P L+ +PID
Sbjct: 129 KTYGVIAMTKSNSDNIIFMVDDLLCFLVGVLLIIACKKGGTSIEDLAEKFPDLIIKVPID 188
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
V +GIT+ A + D LA K+AD R D +
Sbjct: 189 VFKGITDEDAAKVVD-------------------------GLAPKVAD----RND----S 215
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
+V+KL+ LF D T LEINP+ ET E ++++ DAK+NFDDNA FRQK +F + ++
Sbjct: 216 IEQVKKLYKLFCECDCTLLEINPMAETAENQLVAADAKLNFDDNAAFRQKELFKLRDPTQ 275
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E
Sbjct: 276 EDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQ 335
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
+++AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV +G
Sbjct: 336 VVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG 395
Query: 403 KRILDESKLPLIFASDLDEAA 423
KRIL ES + LI A DLD+AA
Sbjct: 396 KRILKESGMTLITAEDLDDAA 416
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 367 ASGIVNAAKQVALKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 422
>gi|317157723|ref|XP_003190872.1| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus oryzae
RIB40]
gi|317157725|ref|XP_001826545.2| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus oryzae
RIB40]
gi|391868503|gb|EIT77717.1| succinyl-CoA synthetase, beta subunit [Aspergillus oryzae 3.042]
Length = 443
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 232/391 (59%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 60 AEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR PV++ S GG DIE VA +T
Sbjct: 120 LITKQTGAAGRLCNAVYICERKFARREFYLAVLMDRQSQSPVIVASSQGGMDIEAVAKET 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+ G+T+ +A KIA L
Sbjct: 180 PEAIITTPIDIKVGVTDEIAG---------------------------------KIATEL 206
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F +A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQK
Sbjct: 207 GFSEQCITEAKDTIQKLYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQK 266
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 267 EVFSWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFL 326
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N L P+V
Sbjct: 327 DVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVNEMGLRTPIVA 386
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ ++L+ES L + DL AA
Sbjct: 387 RLQGTNMEQAHKLLNESGLKIFSIEDLQNAA 417
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+++ ++L+ES L + DL AA
Sbjct: 368 AQGLINVVNEMGLRTPIVARLQGTNMEQAHKLLNESGLKIFSIEDLQNAA 417
>gi|126131926|ref|XP_001382488.1| succinate--CoA ligase (GDP-forming) beta chain (LSC2)
[Scheffersomyces stipitis CBS 6054]
gi|126094313|gb|ABN64459.1| succinate--CoA ligase (GDP-forming) beta chain (LSC2)
[Scheffersomyces stipitis CBS 6054]
Length = 414
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 238/391 (60%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L E VIKAQ L GGRG GHFD+G + GV ++ ++ + +M+GHK
Sbjct: 47 AEGAFDAAKKLGTTELVIKAQALTGGRGKGHFDSGLQGGVKLISSPEEAKDLAAQMLGHK 106
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G V V + + + E Y I+ DR P+++ S GG DIE VAA+T
Sbjct: 107 LITKQTGAAGKEVTAVYIVERRDALTEAYVAILNDRAAQTPIIVASSQGGMDIEGVAAET 166
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T +D+ +G+T+ LA ++A L + AA
Sbjct: 167 PEAIHTFKVDLKEGVTDKLATEVASVLGY-----TDAAI--------------------- 200
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+AA VQ L+ +F D TQ+EINPL ET + +V+++DAK+ FDDNA FRQ+
Sbjct: 201 -------PEAAKAVQNLYKVFEEKDCTQVEINPLSETPDHKVLAMDAKLGFDDNASFRQE 253
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F+ + ++ DP EV+ASKY LN++ +DGNI +VNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 254 EVFNWRDPTQEDPEEVEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGKPANFL 313
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GG +I +AF +I SD V I VN+FGGIV C +A+GL+ A K+F L IP+VV
Sbjct: 314 DCGGTATPATIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFNLDIPVVV 373
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+Q+ K ++D S L L DLD AA
Sbjct: 374 RLQGTNMQQAKELIDNSGLKLFAFEDLDPAA 404
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F L IP+VVRL+GTN+Q+ K ++D S L L DLD AA +
Sbjct: 355 AEGLIAATKNFNLDIPVVVRLQGTNMQQAKELIDNSGLKLFAFEDLDPAAEKIV 408
>gi|119179674|ref|XP_001241383.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392866697|gb|EAS30133.2| succinate-CoA ligase, beta subunit [Coccidioides immitis RS]
Length = 443
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 237/396 (59%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K L ++ VIKAQ+LAGGRG G FDNG K GV + + +
Sbjct: 55 EVARTADEAEAVAKQLGGEDVVIKAQVLAGGRGKGTFDNGLKGGVRILYSPTEARMFAGQ 114
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGHKL+TKQT G N V + + RE Y ++ DR PV++ S GG DIE
Sbjct: 115 MIGHKLVTKQTGARGRICNAVYICERKYARREFYLAVLMDRASQSPVIVSSSQGGMDIEA 174
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA + P + T ID++ G+T+ +A+ IA L F +A +QKL+ +F+
Sbjct: 175 VAKENPEAITTTKIDINVGVTDEIARKIAAGLGFSEQCLEEAKDTIQKLYKVFMER---- 230
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
DATQ+EINPL ET + V+++DAK+NFDDNA
Sbjct: 231 -----------------------------DATQIEINPLAETTDYRVLAMDAKLNFDDNA 261
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK +FS + ++ DP EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 262 EFRQKEVFSWRDTTQEDPDEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGN 321
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L
Sbjct: 322 PANFLDVGGGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLR 381
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 382 TPIVARLQGTNMEKAHQLINDSGLKIFSIEDLQNAA 417
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 368 AQGLINVVRDMNLRTPIVARLQGTNMEKAHQLINDSGLKIFSIEDLQNAA 417
>gi|170084845|ref|XP_001873646.1| succinyl-coa synthetase beta chain, SSC-beta [Laccaria bicolor
S238N-H82]
gi|164651198|gb|EDR15438.1| succinyl-coa synthetase beta chain, SSC-beta [Laccaria bicolor
S238N-H82]
Length = 416
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/388 (45%), Positives = 242/388 (62%), Gaps = 36/388 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A+N KD + VIKAQ+LAGGRG G FDNGF+ GVH ++ + I KMIG KLIT
Sbjct: 57 ASNFGKD----KLVIKAQVLAGGRGKGKFDNGFQGGVHMVDSPEQAKEIASKMIGSKLIT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N +M+A+ E Y ++ DR G V++ S GG +IE VAAK P
Sbjct: 113 KQTGEHGRICNAIMLAERRQPAHEYYVAVLNDRATQGVVLVASAQGGMNIEEVAAKNPSA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID +G+++ A +A L FQ D K +E ++F++
Sbjct: 173 IITTPIDFEKGLSKDEAISVAKKLGFQTD---KTQSEA---ADIFIN------------- 213
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+ +F DATQ+EINP+ T + EV+ +DAK FDDNAEFRQK+IF
Sbjct: 214 -------------LYRIFKEKDATQIEINPMALTTDGEVLCMDAKFGFDDNAEFRQKDIF 260
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++S+ +P EV+A K NL+++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFLDVG
Sbjct: 261 ALRDISQEEPSEVEAQKANLSFIKLDGSIGCLVNGAGLAMATMDVLSLHGGNPANFLDVG 320
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E++ +AF I+ D VK I +N+FGGI+ C IA+G++ A K L+IPL+VRL+
Sbjct: 321 GGATPETVKKAFEILLQDPKVKSIFINIFGGIMRCDYIAEGVIKATKELGLTIPLIVRLK 380
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT E K+++ ES L ++ LD+AA
Sbjct: 381 GTKEAEAKQMIRESGLKIVAFDSLDDAA 408
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L+IPL+VRL+GT E K+++ ES L ++ LD+AA
Sbjct: 359 AEGVIKATKELGLTIPLIVRLKGTKEAEAKQMIRESGLKIVAFDSLDDAA 408
>gi|296818131|ref|XP_002849402.1| succinyl-CoA ligase beta-chain [Arthroderma otae CBS 113480]
gi|238839855|gb|EEQ29517.1| succinyl-CoA ligase beta-chain [Arthroderma otae CBS 113480]
Length = 446
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/388 (44%), Positives = 235/388 (60%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K + ++ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKLIT
Sbjct: 64 AEAIAKKIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEARMFADQMIGHKLIT 123
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + RE Y I+ DR PV++ S GG DIE VA TP
Sbjct: 124 KQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDA 183
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PI++H G+T+ +A+DIA L F Q I + +E
Sbjct: 184 ITTTPINIHTGVTDEIARDIATGLGFS----------------------EQCIPEAME-- 219
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++KL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQK +F
Sbjct: 220 ---------TIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+++ ++ ES L + DL AA
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAA 418
>gi|198433734|ref|XP_002131576.1| PREDICTED: similar to succinate-Coenzyme A ligase, ADP-forming,
beta subunit [Ciona intestinalis]
Length = 447
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 249/393 (63%), Gaps = 35/393 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A NI K+L+ + V+KAQ+LAGGRG GHF +G + GV + ++ + +M+G+KLIT
Sbjct: 65 AYNIAKNLSTSDSVVKAQVLAGGRGKGHFTSGLQGGVKIVYSPDEVKEVASQMLGNKLIT 124
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHN--GPVVIISPSGGTDIENVAAKTP 153
KQT + G NKV+V + + RE YF I +R GPV+I S GG DIE VA+KTP
Sbjct: 125 KQTGQKGRICNKVLVVERKYVRREFYFAITMERGTKQFGPVLIGSAQGGMDIEAVASKTP 184
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ +D++ G TE A ++A + F S+ Q
Sbjct: 185 EAILKEYVDINNGCTEEQAVNLAKRMGFTD------------------SNCHQ------- 219
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
AA + K++ LF++ DA+ +EINP+ E + V+ +DAK+NFDDNA RQK
Sbjct: 220 --------AADCILKMYKLFIAKDASLIEINPMAEDSDGNVMCMDAKLNFDDNAAHRQKE 271
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
IF+ + S+ D R+ A+K ++NY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLD
Sbjct: 272 IFNLRDWSQEDDRDAQAAKADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLD 331
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG + +++AF++I+SD NV ILVN+FGGI+ C IA+G++ A + L IP++VR
Sbjct: 332 VGGGATADQVMEAFKLITSDENVNSILVNIFGGIMRCDVIAQGIIQAAQQLDLKIPIIVR 391
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
L+GT V++ K ++ +S+L ++ L+EAA +V
Sbjct: 392 LQGTKVEDAKALIAQSQLKILTCDSLNEAAKMV 424
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A + L IP++VRL+GT V++ K ++ +S+L ++ L+EAA +
Sbjct: 372 AQGIIQAAQQLDLKIPIIVRLQGTKVEDAKALIAQSQLKILTCDSLNEAAKMVV 425
>gi|302507602|ref|XP_003015762.1| hypothetical protein ARB_06073 [Arthroderma benhamiae CBS 112371]
gi|302667905|ref|XP_003025531.1| hypothetical protein TRV_00293 [Trichophyton verrucosum HKI 0517]
gi|291179330|gb|EFE35117.1| hypothetical protein ARB_06073 [Arthroderma benhamiae CBS 112371]
gi|291189645|gb|EFE44920.1| hypothetical protein TRV_00293 [Trichophyton verrucosum HKI 0517]
Length = 444
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/388 (44%), Positives = 236/388 (60%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K++ ++ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKLIT
Sbjct: 64 AEAIAKNIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEARMFADQMIGHKLIT 123
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + RE Y I+ DR PV++ S GG DIE VA TP
Sbjct: 124 KQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDA 183
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+H G+T+ +A++IA L F Q + + +E
Sbjct: 184 ITTTPIDIHTGVTDEIARNIATGLGFS----------------------EQCVPEAVE-- 219
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++KL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQK +F
Sbjct: 220 ---------TIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+++ ++ ES L + DL AA
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAA 418
>gi|427789563|gb|JAA60233.1| Putative gtp-specific succinyl-coa synthetase beta subunit
[Rhipicephalus pulchellus]
Length = 447
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 239/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I + L + VIKA +LAGGRG G FD+G K GV + + MIGH L T
Sbjct: 67 AEEIAQRLGTPDVVIKALVLAGGRGKGTFDSGLKGGVKMAFSPSEAKKFASLMIGHTLRT 126
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + GI VNKV+V + + RE YF ++ +R +NGPV++ S GG +IE VA + P
Sbjct: 127 KQTGEKGIKVNKVLVTERLYNRREYYFALMMEREYNGPVIVASSQGGVNIEEVAKENPEA 186
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +PID+ +G+ + ++ L F AA E
Sbjct: 187 ILKLPIDITKGVDKERTAELVRGLGFH-----PAAVE----------------------- 218
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A T ++ L+ +FL DAT +EINPL+E + +V +DAK FDDNA FRQK +F
Sbjct: 219 -----GAVTLIENLYKVFLKYDATLVEINPLIEDNNNKVYCLDAKCRFDDNAAFRQKALF 273
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D RE +A + NLNY+ +DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 274 DLRDWTQQDIREKEAHESNLNYIALDGDIGCLVNGAGLAMATMDIIKLHGGSPANFLDVG 333
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AFR+I+SD V+ ILVN+FGGI+ C IA+G++ A ++ L IP+VVRL+
Sbjct: 334 GGATAKQVTEAFRLITSDQKVQAILVNIFGGIMRCDIIAEGVIRAAETLDLKIPIVVRLQ 393
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V E K ++ SKL ++ +LDEAA +V
Sbjct: 394 GTQVDEAKALIATSKLKILACDNLDEAAKMV 424
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A ++ L IP+VVRL+GT V E K ++ SKL ++ +LDEAA +
Sbjct: 372 AEGVIRAAETLDLKIPIVVRLQGTQVDEAKALIATSKLKILACDNLDEAAKMVV 425
>gi|358389047|gb|EHK26640.1| hypothetical protein TRIVIDRAFT_77905 [Trichoderma virens Gv29-8]
Length = 447
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/414 (43%), Positives = 246/414 (59%), Gaps = 34/414 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A ++ K++ + VIKAQ+LAGGRG G FDNG K GV + + ++MIGHK
Sbjct: 64 AAEAKSVAKEIGTGDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFAQQMIGHK 123
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y I+ DR PV++ S GG DIE VA +
Sbjct: 124 LITKQTGAGGRLCNAVYICERKFARREFYLAILMDRASQTPVIVSSSQGGVDIETVAKEQ 183
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID++ G+T+ +A+ IA L F Q I D
Sbjct: 184 PDAITTTYIDINTGVTDEIARGIATGLGFS----------------------EQCIED-- 219
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +QKL+ +FL DATQ+EINPL ET + +V+ +DAK FDDNA++RQ+
Sbjct: 220 ---------AKDTIQKLYKIFLERDATQIEINPLSETSDHQVLCMDAKFGFDDNADYRQQ 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + ++ DP EV A++ NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 271 EVFEWRDTTQEDPDEVRAAQSNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+ ++ L IP++
Sbjct: 331 DVGGGATPAAIREAFELITSDPKVSAIFVNIFGGIVRCDAIATGLIRTVEALNLKIPIIA 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKSFKLSIPLVVRLEGT 445
RL+GTNV+ +I++ES L + DL AA V K KL+ + V +E T
Sbjct: 391 RLQGTNVELAHQIINESGLKIFSIDDLQSAAEKAVQLSKVVKLARDIDVGVEFT 444
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ ++ L IP++ RL+GTNV+ +I++ES L + DL AA
Sbjct: 372 ATGLIRTVEALNLKIPIIARLQGTNVELAHQIINESGLKIFSIDDLQSAA 421
>gi|303320965|ref|XP_003070477.1| succinyl-CoA ligase (GDP-forming), putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240110173|gb|EER28332.1| succinyl-CoA ligase (GDP-forming), putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320036098|gb|EFW18038.1| succinyl-CoA ligase beta-chain [Coccidioides posadasii str.
Silveira]
Length = 443
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 237/396 (59%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K L ++ VIKAQ+LAGGRG G FDNG K GV + + +
Sbjct: 55 EVARTADEAEAVAKQLGGEDVVIKAQVLAGGRGKGTFDNGLKGGVRILYSPTEARMFAGQ 114
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGHKL+TKQT G N V + + RE Y ++ DR PV++ S GG DIE
Sbjct: 115 MIGHKLVTKQTGARGRICNAVYICERKYARREFYLAVLMDRASQSPVIVSSSQGGMDIEA 174
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA + P + T ID++ G+T+ +A+ IA L F +A +QKL+ +F+
Sbjct: 175 VAKENPEAITTTKIDINVGVTDEIARKIAAGLGFSEQCLEEAKDTIQKLYKVFMER---- 230
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
DATQ+EINPL ET + V+++DAK+NFDDNA
Sbjct: 231 -----------------------------DATQIEINPLAETTDYRVLAMDAKLNFDDNA 261
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK +FS + ++ DP EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 262 EFRQKEVFSWRDTTQEDPDEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGN 321
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L
Sbjct: 322 PANFLDVGGGATPSAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVRDMNLR 381
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 382 TPIVARLQGTNMEKAHQLINDSGLKIFSIEDLQNAA 417
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 368 AQGLINVVRDMNLRTPIVARLQGTNMEKAHQLINDSGLKIFSIEDLQNAA 417
>gi|440631738|gb|ELR01657.1| succinyl-CoA ligase subunit beta, mitochondrial [Geomyces
destructans 20631-21]
Length = 445
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/377 (45%), Positives = 232/377 (61%), Gaps = 33/377 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKL+TKQT G N
Sbjct: 76 DMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGAQGRMCN 135
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
V + + RE Y I+ DR GPV++ S GG DIE VA +TP + T ID+H G
Sbjct: 136 SVYICERKFARREFYLAILMDRASQGPVIVSSSQGGMDIETVAKETPEAITTTHIDIHTG 195
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+T+ +A+ KIA + F +A +
Sbjct: 196 VTDEIAR---------------------------------KIAVDVGFSEQCVEEARDTI 222
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
QKL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK IF+ + ++ D
Sbjct: 223 QKLYKVFMDKDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQKEIFNWRDTTQEDAD 282
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A++ LN++ + G+IGCLVNGAGLAMATMDIIKL+GGEPANFLDVGGG +I +A
Sbjct: 283 EVRAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGATPAAIKEA 342
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F +I+SD V I VN+FGGIV C IAKGL++ +S L IP++ RL+GTN++ + ++
Sbjct: 343 FTLITSDPKVSAIFVNIFGGIVRCDAIAKGLISTAESMDLRIPIIARLQGTNMEAAQALI 402
Query: 407 DESKLPLIFASDLDEAA 423
+ES L + DL AA
Sbjct: 403 NESGLKIFSIDDLQNAA 419
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ +S L IP++ RL+GTN++ + +++ES L + DL AA
Sbjct: 370 AKGLISTAESMDLRIPIIARLQGTNMEAAQALINESGLKIFSIDDLQNAA 419
>gi|344303875|gb|EGW34124.1| succinate--CoA ligase beta chain [Spathaspora passalidarum NRRL
Y-27907]
Length = 415
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/381 (43%), Positives = 235/381 (61%), Gaps = 33/381 (8%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTG 102
L E VIKAQ L GGRG GHFD+G + GV ++ Q+ + ++M+GHK+ITKQT G
Sbjct: 57 LGTSELVIKAQALTGGRGKGHFDSGLQGGVKLISSAQEAKDLAQQMLGHKIITKQTGAAG 116
Query: 103 INVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
V V + + + E Y I+ DR P+++ S GG DIE VAA+ P +KT +
Sbjct: 117 KEVTAVYIVERRDAATEAYLAILMDRASQTPIIVASAQGGMDIEGVAAENPDAIKTFQVP 176
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
+ +G+++ L +IA+ L F + +A
Sbjct: 177 LKEGVSDDLGA---------------------------------QIANVLGFTQEAIPEA 203
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
+Q L+ F+ D TQ+EINPL ET + +V+++DAK+ FDDNAEFRQ+ +FS + ++
Sbjct: 204 VKTIQGLYQCFIDRDCTQVEINPLSETPDHKVLAMDAKLGFDDNAEFRQEEVFSWRDTTQ 263
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP+EV+ASKY LN++ +DGNI +VNGAGLAMATMDIIKL+GGEPANFLD GG E+
Sbjct: 264 EDPQEVEASKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCGGTATPET 323
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
I +AF +I SD V I VN+FGGIV C +A+GL+ A +FKL IP+VVRL+GTN+++
Sbjct: 324 IEKAFGLILSDKKVNGIFVNIFGGIVRCDYVAEGLIAAAHTFKLDIPVVVRLQGTNMEKA 383
Query: 403 KRILDESKLPLIFASDLDEAA 423
K +++ S L L +LD AA
Sbjct: 384 KELIENSGLKLYAFEELDPAA 404
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A +FKL IP+VVRL+GTN+++ K +++ S L L +LD AA +
Sbjct: 355 AEGLIAAAHTFKLDIPVVVRLQGTNMEKAKELIENSGLKLYAFEELDPAAEKIV 408
>gi|321250107|ref|XP_003191692.1| succinate-CoA ligase (ADP-forming) [Cryptococcus gattii WM276]
gi|317458159|gb|ADV19905.1| Succinate-CoA ligase (ADP-forming), putative [Cryptococcus gattii
WM276]
Length = 418
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 239/389 (61%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A ++ K E VIKAQ+LAGGRG GHFD+GF+ GV ++ EKM+GHK
Sbjct: 52 AAEAESVAKSFGKDELVIKAQVLAGGRGKGHFDSGFQGGVQMVDSPAQAKEYAEKMLGHK 111
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N VM+A+ + +E Y ++ DR GPV++ S GG +IE+VA +T
Sbjct: 112 LITKQTGAAGRICNAVMLAERMPPQKEYYAAVLNDRTTGGPVLVTSSQGGMNIEDVAKET 171
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T P+D GI+ + A ++A L F+ + AQK
Sbjct: 172 PDAIITTPLDFDNGISSAEALELAKKLGFKEN--------------------AQK----- 206
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
AA KL+ +F D+TQ+EINPL E +V+ +DAK FDDNA+FRQ
Sbjct: 207 --------NAADVFAKLYTIFKEKDSTQIEINPLAELSNGQVLCMDAKFGFDDNADFRQA 258
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF + ++ D +EV+A++Y LN++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFL
Sbjct: 259 DIFKLRDTTQEDAQEVEAAQYGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGSPANFL 318
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +++ +AF ++ + NVK I VN+FGGI+ C IA+G++ A K +L IPLVV
Sbjct: 319 DVGGGATADAVKKAFELLLTSKNVKSIFVNIFGGIMRCDVIAEGIIKATKELQLEIPLVV 378
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RL+GT +E K+++ ES L + LDE
Sbjct: 379 RLQGTKEEEAKKMIRESGLKIFPFDGLDE 407
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A ++ A K +L IPLVVRL+GT +E K+++ ES L + LDE
Sbjct: 360 AEGIIKATKELQLEIPLVVRLQGTKEEEAKKMIRESGLKIFPFDGLDE 407
>gi|195111100|ref|XP_002000117.1| GI10056 [Drosophila mojavensis]
gi|193916711|gb|EDW15578.1| GI10056 [Drosophila mojavensis]
Length = 451
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 249/425 (58%), Gaps = 39/425 (9%)
Query: 7 QQIANF------SYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRG 60
QQ+ N SY + S + + ++ + A +I K L V+KAQ+LAGGRG
Sbjct: 33 QQLRNLNVQEHVSYTLLNESNIPTPRFAVAKNGKEAHDIAKKLKTDNLVLKAQVLAGGRG 92
Query: 61 LGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRET 120
G F NG K GV + + I KMI L+TKQT + G KVMVA+ RE
Sbjct: 93 KGTFKNGLKGGVRVVFDPKSAEEISSKMIDQLLVTKQTGEAGRLCKKVMVAERKFPRREF 152
Query: 121 YFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLE 180
YF ++ +R NGPV+I S GG DIE VA +P + PID+ +G+T+ A + D +
Sbjct: 153 YFAVMLERAFNGPVLIASKEGGVDIEEVARDSPDAIIYEPIDIGKGLTKEQACRVIDKVG 212
Query: 181 FQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQ 240
G+ A V L NL + LF+ DA
Sbjct: 213 LGGE---NAQEHVDMLLNL------------------------------YKLFVKKDALL 239
Query: 241 LEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGM 300
+EINP E ++DAK+ FDDNAEFRQK +FS + ++ DP+EV+A+KYNLNY+ +
Sbjct: 240 VEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELFSLRDWTQEDPKEVEAAKYNLNYIAL 299
Query: 301 DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCIL 360
DG IGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG E++ AF+II+SD V C+L
Sbjct: 300 DGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDKKVMCLL 359
Query: 361 VNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLD 420
VN+FGGI+ C IA+G++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD
Sbjct: 360 VNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRNSGLKILARDDLD 419
Query: 421 EAASL 425
+AA +
Sbjct: 420 KAADM 424
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRNSGLKILARDDLDKAADMAV 426
>gi|326474990|gb|EGD98999.1| succinyl-CoA ligase beta-chain [Trichophyton tonsurans CBS 112818]
gi|326483203|gb|EGE07213.1| succinyl-CoA ligase beta-chain [Trichophyton equinum CBS 127.97]
Length = 415
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/388 (44%), Positives = 236/388 (60%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K++ ++ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKLIT
Sbjct: 35 AEAIAKNIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEARMFADQMIGHKLIT 94
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + RE Y I+ DR PV++ S GG DIE VA TP
Sbjct: 95 KQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDA 154
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+H G+T+ +A++IA L F Q + + +E
Sbjct: 155 ITTTPIDIHTGVTDQIARNIATGLGFS----------------------EQCVPEAVE-- 190
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++KL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQK +F
Sbjct: 191 ---------TIKKLYKVFMEKDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 241
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 242 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 301
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P+V RL+
Sbjct: 302 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 361
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+++ ++ ES L + DL AA
Sbjct: 362 GTNMEKAHALISESGLKIFSIEDLQVAA 389
>gi|327356071|gb|EGE84928.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis ATCC
18188]
Length = 444
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/396 (44%), Positives = 239/396 (60%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K + ++ VIKAQ+LAGGRG G FDNG K GV + + +
Sbjct: 56 EVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAGQ 115
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGH+L+TKQT G N V + + RE Y I+ DR PV++ S GG DIE+
Sbjct: 116 MIGHRLVTKQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGVDIES 175
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + T +D++ G+T+ +A++IA L F ++ E
Sbjct: 176 VAKETPEAITTTSVDINVGVTDEMARNIAKDLGF-----SEQCVE--------------- 215
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A +QKL+ +F+ DATQ+EINPL ET E EV+++DAK+ FDDNA
Sbjct: 216 -------------EAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNA 262
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK IFS + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 263 EFRQKEIFSWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGN 322
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++I AF +I+SD V I VN+FGGIV C IA+GL+N L
Sbjct: 323 PANFLDVGGGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLR 382
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+ + +++ES L + DL AA
Sbjct: 383 TPIVARLQGTNMAKAHELINESGLKIFSMEDLQNAA 418
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+ + +++ES L + DL AA
Sbjct: 369 AQGLINVVNEMNLRTPIVARLQGTNMAKAHELINESGLKIFSMEDLQNAA 418
>gi|196005415|ref|XP_002112574.1| hypothetical protein TRIADDRAFT_25488 [Trichoplax adhaerens]
gi|190584615|gb|EDV24684.1| hypothetical protein TRIADDRAFT_25488 [Trichoplax adhaerens]
Length = 416
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/383 (45%), Positives = 234/383 (61%), Gaps = 33/383 (8%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTG 102
L K+ V+KAQ+LAGGRG G F++G K GV + + I M+GHKLITKQT G
Sbjct: 43 LGSKDVVVKAQVLAGGRGKGLFESGLKGGVKIAYSPDEAKTIAANMLGHKLITKQTGGAG 102
Query: 103 INVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
+ NKVMV++ + RE YF I D GP++I S GG DIE VAA+TP + PID
Sbjct: 103 VLCNKVMVSERLYPRREYYFAITMDPTSMGPIIIASNQGGVDIETVAAETPEAIIKQPID 162
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
+ +G+ A IA + F G AT++
Sbjct: 163 IIEGLNRDTALSIARKVGF-GPEYIDQATDI----------------------------- 192
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
+QKL+++F+ DA +EINP+ E V +DAK+ D +A FR KN+ + S+
Sbjct: 193 ---IQKLYSVFIENDALMVEINPMTEDSNGNVYCMDAKVKLDTSALFRHKNLAELRDWSQ 249
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DPR+V ASK +LNY+G+DG+IGCLVNGAGLAM+TMDIIKLHGG PANFLDVGGG +
Sbjct: 250 EDPRDVAASKADLNYIGLDGSIGCLVNGAGLAMSTMDIIKLHGGLPANFLDVGGGATADQ 309
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
+ QAF+IISSD +V +LVN+FGGI+ C IAKG+V A KL IP++VRL+GT V++
Sbjct: 310 VTQAFQIISSDQHVNAVLVNIFGGIMRCDVIAKGIVAAADQLKLKIPIIVRLQGTRVEDA 369
Query: 403 KRILDESKLPLIFASDLDEAASL 425
K ++ SK ++ DLDEAA L
Sbjct: 370 KAVIGASKFHILSCDDLDEAAKL 392
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A KL IP++VRL+GT V++ K ++ SK ++ DLDEAA +
Sbjct: 341 AKGIVAAADQLKLKIPIIVRLQGTRVEDAKAVIGASKFHILSCDDLDEAAKLAV 394
>gi|76573373|gb|ABA46791.1| succinyl-CoA ligase beta subunit-like protein [Solanum tuberosum]
Length = 311
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 167/336 (49%), Positives = 224/336 (66%), Gaps = 33/336 (9%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+TKQT G V+KV + + +++ E YF I+ DR GP++I GGT IE+
Sbjct: 1 MLGQMLVTKQTGAQGKVVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIED 60
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
+A K P ++ +PIDV +GI++ A + D LA K
Sbjct: 61 LAEKFPDMIIKVPIDVFKGISDEDAAKVVD-------------------------GLAPK 95
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+AD R D + +V+KL+NLF D T LEINPL ET + ++++ DAK+NFDDNA
Sbjct: 96 VAD----RND----SIEQVKKLYNLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNA 147
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+RQK IFS + S+ DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG
Sbjct: 148 AYRQKEIFSLRDSSQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGT 207
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGG E +++AF+I+++D VK ILVN+FGGI+ C IA G+VNA K +L
Sbjct: 208 PANFLDVGGNATEGQVVEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLK 267
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+P++VRLEGTNV++GKRIL ES + LI A DLD+AA
Sbjct: 268 VPVIVRLEGTNVEQGKRILKESGMKLITAEDLDDAA 303
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K +L +P++VRLEGTNV++GKRIL ES + LI A DLD+AA + A
Sbjct: 254 ASGIVNAAKQVQLKVPVIVRLEGTNVEQGKRILKESGMKLITAEDLDDAAEKAVKA 309
>gi|261187891|ref|XP_002620363.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis SLH14081]
gi|239593480|gb|EEQ76061.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis SLH14081]
Length = 444
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/396 (44%), Positives = 239/396 (60%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K + ++ VIKAQ+LAGGRG G FDNG K GV + + +
Sbjct: 56 EVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAGQ 115
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGH+L+TKQT G N V + + RE Y I+ DR PV++ S GG DIE+
Sbjct: 116 MIGHRLVTKQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGVDIES 175
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + T +D++ G+T+ +A++IA L F ++ E
Sbjct: 176 VAKETPEAITTTSVDINVGVTDEMARNIAKDLGF-----SEQCVE--------------- 215
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A +QKL+ +F+ DATQ+EINPL ET E EV+++DAK+ FDDNA
Sbjct: 216 -------------EAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNA 262
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK IFS + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 263 EFRQKEIFSWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGN 322
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++I AF +I+SD V I VN+FGGIV C IA+GL+N L
Sbjct: 323 PANFLDVGGGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLR 382
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+ + +++ES L + DL AA
Sbjct: 383 TPIVARLQGTNMAKAHELINESGLKIFSMEDLQNAA 418
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+ + +++ES L + DL AA
Sbjct: 369 AQGLINVVNEMNLRTPIVARLQGTNMAKAHELINESGLKIFSMEDLQNAA 418
>gi|58259261|ref|XP_567043.1| succinate-CoA ligase (ADP-forming) [Cryptococcus neoformans var.
neoformans JEC21]
gi|134107401|ref|XP_777585.1| hypothetical protein CNBA7060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260279|gb|EAL22938.1| hypothetical protein CNBA7060 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223180|gb|AAW41224.1| succinate-CoA ligase (ADP-forming), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 418
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 172/389 (44%), Positives = 239/389 (61%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A ++ K E VIKAQ+LAGGRG GHFD+GF+ GV ++ EKM+G+K
Sbjct: 52 AAEAESVAKSFGKDELVIKAQVLAGGRGKGHFDSGFQGGVQMVDSPAQAKEYAEKMLGYK 111
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N VM+A+ + +E Y I+ DR GPV++ S GG +IE+VA +T
Sbjct: 112 LITKQTGAAGRICNAVMLAERMPPQKEYYAAILNDRTTGGPVLVTSSQGGMNIEDVAKET 171
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T P+D GI+ + A ++A L F+ + AQK
Sbjct: 172 PDAIITTPLDFDNGISHAEALELAKKLGFKEN--------------------AQK----- 206
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
AA KL+ +F D+TQ+EINPL E +V+ +DAK FDDNA+FRQK
Sbjct: 207 --------NAADVFGKLYTIFKEKDSTQIEINPLAELSNGQVLCMDAKFGFDDNADFRQK 258
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++F + ++ D +EV+A++Y LN++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFL
Sbjct: 259 DVFKLRDTTQEDAQEVEAAEYGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGSPANFL 318
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E++ +AF ++ + NVK I VN+FGGI+ C IA+G++ A K L IPLVV
Sbjct: 319 DVGGGATAEAVKKAFELLLTSKNVKSIFVNIFGGIMRCDVIAEGIIKATKELHLEIPLVV 378
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RL+GT +E K+++ ES L + LDE
Sbjct: 379 RLQGTKEEEAKQMIRESGLKIFPFDGLDE 407
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A ++ A K L IPLVVRL+GT +E K+++ ES L + LDE
Sbjct: 360 AEGIIKATKELHLEIPLVVRLQGTKEEEAKQMIRESGLKIFPFDGLDE 407
>gi|336273440|ref|XP_003351474.1| hypothetical protein SMAC_00014 [Sordaria macrospora k-hell]
gi|380095753|emb|CCC05799.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 447
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 241/400 (60%), Gaps = 38/400 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K + ++ VIKAQ+LAGGRG G FDNG K GV + + E+MIGHKLIT
Sbjct: 67 AEAIAKKIGGEDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLIT 126
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G + V + + RE Y ++ DR GPV++ S GG DIE VA + P
Sbjct: 127 KQTGAQGRLCSSVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPDA 186
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T +D++ G+T+ +A+ IA QKL F
Sbjct: 187 IHTTYVDINVGVTDDMARGIA-----------------QKLG----------------FS 213
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+A +QKL+ +FL DATQ+EINPL ET + +V+ +DAK FDDNA++RQK+IF
Sbjct: 214 EQCVEEAKDTIQKLYKIFLEKDATQIEINPLSETSDHKVMCMDAKFGFDDNADYRQKDIF 273
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ DP EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFLDVG
Sbjct: 274 QLRDTTQEDPDEVRAAQSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFLDVG 333
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +I +AF +I+SD V I VN+FGGIV C IA GL+N KS L IP++ RL+
Sbjct: 334 GGATPAAIREAFELITSDPKVTAIFVNIFGGIVRCDAIAHGLINTVKSLDLKIPIIARLQ 393
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
GTN++ +++++S + + DL AA KS +LS
Sbjct: 394 GTNMEAAHQLINDSGMKIFSIDDLQSAAE-----KSVQLS 428
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N KS L IP++ RL+GTN++ +++++S + + DL AA
Sbjct: 372 AHGLINTVKSLDLKIPIIARLQGTNMEAAHQLINDSGMKIFSIDDLQSAA 421
>gi|238508772|ref|XP_002385570.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
NRRL3357]
gi|220688462|gb|EED44815.1| succinyl-CoA synthetase beta subunit, putative [Aspergillus flavus
NRRL3357]
Length = 491
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 232/391 (59%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 108 AEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 167
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR PV++ S GG DIE VA +T
Sbjct: 168 LITKQTGAAGRLCNAVYICERKFARREFYLAVLMDRQSQSPVIVASSQGGMDIEAVAKET 227
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+ G+T+ +A KIA L
Sbjct: 228 PEAIITTPIDIKVGVTDEIAG---------------------------------KIATEL 254
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F +A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQK
Sbjct: 255 GFSEQCIPEAKDTIQKLYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQK 314
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 315 EVFSWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPANFL 374
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N L P+V
Sbjct: 375 DVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQGLINVVNEMGLRTPIVA 434
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ ++L+ES L + DL AA
Sbjct: 435 RLQGTNMEQAHKLLNESGLKIFSIEDLQNAA 465
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+++ ++L+ES L + DL AA
Sbjct: 416 AQGLINVVNEMGLRTPIVARLQGTNMEQAHKLLNESGLKIFSIEDLQNAA 465
>gi|334330601|ref|XP_001378919.2| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Monodelphis domestica]
Length = 575
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 239/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 195 AYAIAKKLGSKDVVIKAQVLAGGRGKGIFESGLKGGVKIVFSPEEAKAVSAQMIGKKLFT 254
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 255 KQTGEKGRICNNVLVCERRYPRREYYFAITMERTFQGPVLIGSAQGGVNIEDVAAENPEA 314
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ GI + A LAQK+ F
Sbjct: 315 IFKEPIDIVDGIKKEQA-----------------------------VRLAQKMG----FP 341
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L AA + KL+ LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 342 SSLVDSAADNMVKLYELFLKYDATMVEINPMVEDADGGVLCMDAKINFDSNSSYRQKKIF 401
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K ++NY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 402 DLQDWTQEDERDKDAAKADINYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 461
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + QAF++I+SD V+ ILVN+FGGI+ C IA+G+V A K + IP+VVRL+
Sbjct: 462 GGATVNQVTQAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLDIKIPIVVRLQ 521
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 522 GTRVDDAKALIADSGLKILACDDLDEAAKMV 552
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K + IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 500 AQGIVMAVKDLDIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 553
>gi|315041433|ref|XP_003170093.1| succinyl-CoA ligase beta-chain [Arthroderma gypseum CBS 118893]
gi|311345127|gb|EFR04330.1| succinyl-CoA ligase beta-chain [Arthroderma gypseum CBS 118893]
Length = 444
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 173/388 (44%), Positives = 234/388 (60%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K + ++ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKLIT
Sbjct: 64 AEAIAKKIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEARMFADQMIGHKLIT 123
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + RE Y I+ DR PV++ S GG DIE VA TP
Sbjct: 124 KQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGMDIEAVAKDTPDA 183
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+H G+T+ +A +IA L F Q + + +E
Sbjct: 184 ITTTPIDIHTGVTDEIAHNIATGLGFS----------------------EQCVPEAVE-- 219
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++KL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQK +F
Sbjct: 220 ---------TIKKLYKVFMERDATQIEINPLSETSDHQVLAMDAKLGFDDNADFRQKEVF 270
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 271 SWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 330
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P+V RL+
Sbjct: 331 GGATPAAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMNLRTPIVARLQ 390
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+++ ++ ES L + DL AA
Sbjct: 391 GTNMEKAHALISESGLKIFSIEDLQVAA 418
>gi|323308919|gb|EGA62151.1| Lsc2p [Saccharomyces cerevisiae FostersO]
Length = 427
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 234/389 (60%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEKVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYLFDELDPAAKKV 421
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYLFDELDPAAKKVV 422
>gi|323304746|gb|EGA58506.1| Lsc2p [Saccharomyces cerevisiae FostersB]
Length = 427
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 234/389 (60%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYLFDELDPAAKKV 421
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYLFDELDPAAKKVV 422
>gi|405118102|gb|AFR92877.1| succinate-CoA ligase [Cryptococcus neoformans var. grubii H99]
Length = 418
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 238/389 (61%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A ++ K E VIKAQ+LAGGRG GHFD+GF+ GV ++ +KM+GHK
Sbjct: 52 AAEAESVAKSFGKDELVIKAQVLAGGRGKGHFDSGFQGGVQMVDSPAQAKEYADKMLGHK 111
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N VM+A+ + +E Y ++ DR GPV++ S GG +IE+VA +T
Sbjct: 112 LITKQTGAAGRICNAVMLAERMPPQKEYYAAVLNDRTTGGPVLVTSSQGGMNIEDVAKET 171
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T P+D GI + A ++A L F+ D AQK
Sbjct: 172 PDAIITTPLDFDNGIGHAEALELAKKLGFKED--------------------AQK----- 206
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
AA KL+ +F D+TQ+EINPL E +V+ +DAK FDDNA+FRQK
Sbjct: 207 --------NAADVFGKLYTIFKEKDSTQIEINPLAELSNGQVLCMDAKFGFDDNADFRQK 258
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++F + ++ D +EV+A++Y LN++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFL
Sbjct: 259 DVFKLRDTTQEDAQEVEAAEYGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGSPANFL 318
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +++ +AF ++ + NVK I VN+FGGI+ C IA+G++ A K L IPLVV
Sbjct: 319 DVGGGATADAVKKAFELLLTSKNVKSIFVNIFGGIMRCDVIAEGIIKATKELHLEIPLVV 378
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RL+GT +E K+++ ES L + LDE
Sbjct: 379 RLQGTKEEEAKQMIRESGLKIFPFDGLDE 407
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A ++ A K L IPLVVRL+GT +E K+++ ES L + LDE
Sbjct: 360 AEGIIKATKELHLEIPLVVRLQGTKEEEAKQMIRESGLKIFPFDGLDE 407
>gi|320586114|gb|EFW98793.1| succinyl-synthetase beta [Grosmannia clavigera kw1407]
Length = 445
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 183/417 (43%), Positives = 247/417 (59%), Gaps = 37/417 (8%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A + K+++ + VIKAQ+LAGGRG G FDNG K GV + + E+MI
Sbjct: 59 ARTGAEAEEVAKNISNGDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMI 118
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GHKLITKQT G N V + + RE Y I+ DR PV++ S GG DIE VA
Sbjct: 119 GHKLITKQTGAGGRLCNAVYICERKFARREFYLAILMDRATQKPVIVSSSQGGMDIEAVA 178
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+ P + + ID+ G+T+ +A+DIA L F +QKL+ +F
Sbjct: 179 KENPEAINSTYIDIETGVTDEIARDIAVKLGFSEQCVEDGKDTIQKLYQIF--------- 229
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
K K DATQ+EINPL ET + +V+ +DAK NFDDNA +
Sbjct: 230 ---------KEK---------------DATQIEINPLSETSDHKVMCMDAKFNFDDNAAY 265
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ+ +FS + S+ D EV A+K NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PA
Sbjct: 266 RQEEVFSWRDTSQEDAEEVRAAKSNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGNPA 325
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +I +AF +I+S+ NV + VN+FGGIV C IA GL+N ++ L IP
Sbjct: 326 NFLDVGGGATPAAIKEAFELITSEQNVTAVFVNIFGGIVRCDAIAHGLINTVETLNLRIP 385
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKSFKLSIPLVVRLEGT 445
++ RL+GTNV++ +I++ES L + DL AA V K K++ + V +E T
Sbjct: 386 IITRLQGTNVEQAHQIINESGLKIFSIDDLQSAAEKAVQLSKVVKMARDIDVSVEFT 442
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N ++ L IP++ RL+GTNV++ +I++ES L + DL AA
Sbjct: 370 AHGLINTVETLNLRIPIITRLQGTNVEQAHQIINESGLKIFSIDDLQSAA 419
>gi|398366275|ref|NP_011760.3| succinate--CoA ligase (GDP-forming) subunit beta [Saccharomyces
cerevisiae S288c]
gi|1711580|sp|P53312.1|SUCB_YEAST RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial; AltName: Full=Succinyl-CoA synthetase
beta chain; Short=SCS-beta; Flags: Precursor
gi|1323442|emb|CAA97273.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151943518|gb|EDN61829.1| ligase of succinyl-coa [Saccharomyces cerevisiae YJM789]
gi|256272655|gb|EEU07632.1| Lsc2p [Saccharomyces cerevisiae JAY291]
gi|285812435|tpg|DAA08335.1| TPA: succinate--CoA ligase (GDP-forming) subunit beta
[Saccharomyces cerevisiae S288c]
gi|323354891|gb|EGA86724.1| Lsc2p [Saccharomyces cerevisiae VL3]
gi|349578447|dbj|GAA23613.1| K7_Lsc2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299498|gb|EIW10592.1| Lsc2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 427
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 234/389 (60%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422
>gi|388852287|emb|CCF54098.1| probable beta-succinyl CoA synthetase precursor [Ustilago hordei]
Length = 426
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 174/379 (45%), Positives = 237/379 (62%), Gaps = 32/379 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE VIKAQ+LAGGRG GHFD+G + GVH ++ + KMIG+ LITKQT G
Sbjct: 69 KEIVIKAQVLAGGRGKGHFDSGLQGGVHLIKTPEEARDLAAKMIGNHLITKQTGAGGRLC 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N VM+A++ E Y ++ DR PV+I S GG IE VAA+ P + T PID +
Sbjct: 129 NAVMIAEARPPHHEYYVAVLNDRATQLPVMIASNQGGMSIEEVAAENPEAIITTPIDFEK 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+++ A IA L F +S+ Q+ +AA
Sbjct: 189 GLSKEDALAIAKKLGF--------------------TSVKQE------------EQAAET 216
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
QKL+ LF DATQ+EINPL E+ + EV+ +DAK+ FD+NA+FRQ ++F + ++ DP
Sbjct: 217 FQKLYKLFDEKDATQVEINPLAESKDGEVLCMDAKLGFDENADFRQADVFQLRDTTQEDP 276
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EVDA+KY LN++ +DGNIGCLVNGAGLAMATMD++KL+GG PANFLDVGG + S+ +
Sbjct: 277 DEVDAAKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDVGGTASAASVKK 336
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF ++ S VK I VN+FGGIV+C IA+G++ A + +SIPLVVRL+GT+ +E K +
Sbjct: 337 AFELLLSSKEVKGIFVNIFGGIVSCKKIAEGIIQATQELDMSIPLVVRLQGTHEKEAKEL 396
Query: 406 LDESKLPLIFASDLDEAAS 424
+ S L + LDEAA+
Sbjct: 397 IKRSNLKIFAFDGLDEAAA 415
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + +SIPLVVRL+GT+ +E K ++ S L + LDEAA
Sbjct: 365 AEGIIQATQELDMSIPLVVRLQGTHEKEAKELIKRSNLKIFAFDGLDEAA 414
>gi|323333394|gb|EGA74790.1| Lsc2p [Saccharomyces cerevisiae AWRI796]
Length = 427
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 234/389 (60%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARQLEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLVEAARQLEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422
>gi|389624145|ref|XP_003709726.1| succinyl-CoA ligase subunit beta [Magnaporthe oryzae 70-15]
gi|59802928|gb|AAX07669.1| succinyl-CoA ligase beta-chain-like protein [Magnaporthe grisea]
gi|351649255|gb|EHA57114.1| succinyl-CoA ligase subunit beta [Magnaporthe oryzae 70-15]
gi|440472628|gb|ELQ41479.1| succinyl-CoA ligase beta-chain [Magnaporthe oryzae Y34]
gi|440485999|gb|ELQ65908.1| succinyl-CoA ligase beta-chain [Magnaporthe oryzae P131]
Length = 446
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 172/388 (44%), Positives = 233/388 (60%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K++ + VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKLIT
Sbjct: 66 AEQVAKEIGHDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEARMFADQMIGHKLIT 125
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N V + + RE Y I+ DR PV++ S GG DIE VA + P
Sbjct: 126 KQTGAQGRPCNAVYICERKFARREFYLAILMDRGSQSPVIVSSSQGGMDIEGVAKENPDA 185
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T ID++ G+T+ A+DIA L F Q I D
Sbjct: 186 IVTTHIDINTGVTDETARDIAQKLGFS----------------------EQCIED----- 218
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A +QKL+ +F+ D TQ+EINPL ET + +V+ +DAK FDDNAEFRQK IF
Sbjct: 219 ------AKDTIQKLYKIFIEKDMTQIEINPLSETSDHKVMCMDAKFGFDDNAEFRQKEIF 272
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 273 EKRDTTQEDAEEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGSPANFLDVG 332
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +I +AF +I+SD V + VN+FGGIV C IA GL+N K+ L +P++ RL+
Sbjct: 333 GGATPAAIKEAFELITSDQKVSAVFVNIFGGIVRCDHIANGLINTVKTLNLKVPIIARLQ 392
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV++ +I+++S + + DL AA
Sbjct: 393 GTNVEQAHQIINDSGMKIFSIDDLQSAA 420
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N K+ L +P++ RL+GTNV++ +I+++S + + DL AA
Sbjct: 371 ANGLINTVKTLNLKVPIIARLQGTNVEQAHQIINDSGMKIFSIDDLQSAA 420
>gi|259146745|emb|CAY80002.1| Lsc2p [Saccharomyces cerevisiae EC1118]
Length = 427
Score = 330 bits (847), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 234/389 (60%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA
Sbjct: 369 ALGLVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAA 418
>gi|403414946|emb|CCM01646.1| predicted protein [Fibroporia radiculosa]
Length = 417
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 241/393 (61%), Gaps = 32/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ + A I K VIKAQ+LAGGRG G FDNGF+ GVH + + KM+G
Sbjct: 48 QSPQEAYEIAKQFGSTGCVIKAQVLAGGRGKGKFDNGFQGGVHVVESPEQAKEFASKMLG 107
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
KLITKQT G N VM+A+ + + E Y ++ DR +GPV+++S GG +IE VAA
Sbjct: 108 AKLITKQTGAAGRICNTVMLAERRDASHEYYVAVLNDRATSGPVLVVSAQGGMNIEEVAA 167
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
K P + T PI +G++++ A +A L F+ +
Sbjct: 168 KDPDAIITTPIHFEKGLSKAEALSVAKKLGFKSE-------------------------- 201
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+ + +AA L+ +F DATQ+EINPL ET + V+ +DAK FDDNA+FR
Sbjct: 202 ------NAENEAAETFINLYKIFKEKDATQIEINPLGETADGHVLCMDAKFGFDDNADFR 255
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK+IF+ ++++ + EV+A K NLN++ +DGNIGCLVNGAGLAMATMD++ LHGG PAN
Sbjct: 256 QKDIFALRDITQEEVSEVEAQKANLNFIKLDGNIGCLVNGAGLAMATMDVLALHGGNPAN 315
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E++ +AF I+ +D VK I +N+FGGI+ C IA+G++ A K LSIPL
Sbjct: 316 FLDVGGGATPETVKKAFEILLADPKVKSIFINIFGGIMRCDYIAEGVIKATKELGLSIPL 375
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+VRL+GT + K+++ ES L +I +LDEAA
Sbjct: 376 IVRLKGTMESQAKQMIRESGLKIIPFDELDEAA 408
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K LSIPL+VRL+GT + K+++ ES L +I +LDEAA
Sbjct: 359 AEGVIKATKELGLSIPLIVRLKGTMESQAKQMIRESGLKIIPFDELDEAA 408
>gi|50302613|ref|XP_451242.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640373|emb|CAH02830.1| KLLA0A05478p [Kluyveromyces lactis]
Length = 422
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 240/393 (61%), Gaps = 35/393 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
AT I K+L K V+KAQ L GGRG GHFDNG +SG+H ++VQD + KM+G+ LIT
Sbjct: 56 ATKIAKELGGKNLVVKAQALTGGRGKGHFDNGMQSGIHMIDSVQDATEVSGKMLGYHLIT 115
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQ+ G V+ V + + VN E Y I+ DR P++I S GG +IE+VA P
Sbjct: 116 KQSGIKGKLVSGVYIVERVNAKHEAYLSILMDRKTKKPLIICSSEGGMNIEDVAKTNPDA 175
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+K ++ G+T A +IA L F + +A A V KL+ +F
Sbjct: 176 IKKFYVEDSVGLTPETAAEIAASLGFSKEAEADAKDAVLKLYKIFKEK------------ 223
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVET--DEREVISVDAKINFDDNAEFRQKN 273
DATQ+EINPL E +++V+ +DAK FDDNA FRQK+
Sbjct: 224 ---------------------DATQIEINPLSEVLDQDKKVMCMDAKFGFDDNASFRQKD 262
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
++S ++++ DP EV A K +LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD
Sbjct: 263 VYSWRDLTQEDPDEVTAKKSDLNFVKLKGNIGCLVNGAGLAMATMDVIKLYGGDPANFLD 322
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
GGG E+I AF++I S+ NV I VN+FGGIV C +A+GLV A K+ + +P+V R
Sbjct: 323 CGGGATPETIETAFKLILSNDNVDAIFVNIFGGIVRCDFVAQGLVAATKNLSVKVPIVAR 382
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
L+GTN+++G+RI+ ES L + +LD AA V
Sbjct: 383 LQGTNLEQGRRIIAESGLKIYSFDELDPAAEKV 415
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LV A K+ + +P+V RL+GTN+++G+RI+ ES L + +LD AA
Sbjct: 363 AQGLVAATKNLSVKVPIVARLQGTNLEQGRRIIAESGLKIYSFDELDPAA 412
>gi|260796003|ref|XP_002592994.1| hypothetical protein BRAFLDRAFT_117780 [Branchiostoma floridae]
gi|229278218|gb|EEN49005.1| hypothetical protein BRAFLDRAFT_117780 [Branchiostoma floridae]
Length = 450
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/398 (42%), Positives = 246/398 (61%), Gaps = 36/398 (9%)
Query: 31 EDART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ART A + K L ++ VIKAQ+LAGGRG G FD+G K GV + ++ I K
Sbjct: 61 EVARTPEEAFELAKKLGGEDVVIKAQVLAGGRGKGSFDSGLKGGVKIVFSAEECKDIATK 120
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+GHK+ TKQT + G N+V++ + + RE YF IV +R + GP ++ S GG +IE
Sbjct: 121 MLGHKIFTKQTGEAGRICNEVLLVERLYPRREFYFAIVMERAYGGPAIVASSQGGVNIEE 180
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
+A + P + ID+ +G++ A+ +A + FQ +L+ +
Sbjct: 181 IAEEYPDAIIKEGIDIVEGLSIDQARGVAAKMNFQKELQEE------------------- 221
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
AA + K++ +F DAT +EINP+ E +V +DAK+ FDDNA
Sbjct: 222 --------------AAEMMVKIYEMFSRTDATMVEINPMSEDSNGKVYCMDAKVRFDDNA 267
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
E+RQK+IF+ + S+ D R++ A+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG
Sbjct: 268 EYRQKDIFALRDWSQEDERDIQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGS 327
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG + +AF++I+SD NV+ I+VN+FGGI+ C IA+G++ A L
Sbjct: 328 PANFLDVGGGATAAQVTEAFKLITSDPNVQAIMVNIFGGIMRCDVIAQGIIEAATELDLK 387
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
+P+VVRL+GT V + K ++ S L ++ +LD+AA +
Sbjct: 388 VPIVVRLQGTQVDDAKALIAASGLRILACDNLDDAAKM 425
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A L +P+VVRL+GT V + K ++ S L ++ +LD+AA +
Sbjct: 374 AQGIIEAATELDLKVPIVVRLQGTQVDDAKALIAASGLRILACDNLDDAAKMAV 427
>gi|156050539|ref|XP_001591231.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154692257|gb|EDN91995.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 463
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 232/377 (61%), Gaps = 33/377 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ VIKAQ+LAGGRG G FDNG K GV + + E+MIGHKL+TKQT G N
Sbjct: 94 DMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLVTKQTGAQGRICN 153
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
V + + RE Y I+ DR GPV++ S GG DIE VA ++P+ + T ID+H+G
Sbjct: 154 SVYICERKFARREFYLAILMDRASQGPVIVSSSQGGMDIETVAKESPNAITTTYIDIHKG 213
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+T+ +A+ I + F A VQKL+ +F+
Sbjct: 214 VTDDIARKIVTDIGFSEQCIEDAKDTVQKLYKIFMEK----------------------- 250
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK++F + ++ D
Sbjct: 251 ----------DATQIEINPLSETSDHKVLAMDAKLGFDDNAEFRQKDVFEWRDTTQEDAE 300
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A++ LN++ + G+IGCLVNGAGLAMATMDIIKL+GGEPANFLDVGGG ++I +A
Sbjct: 301 EVRAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGATPQAIREA 360
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F +I+SD V I VN+FGGIV C IA+GL++ +S L IP++ RL+GTN++ +++
Sbjct: 361 FTLITSDPKVTAIFVNIFGGIVRCDAIAQGLISTVESMNLRIPIIARLQGTNMEAAHQLI 420
Query: 407 DESKLPLIFASDLDEAA 423
++S L + DL AA
Sbjct: 421 NDSGLKIFSIDDLQSAA 437
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ +S L IP++ RL+GTN++ +++++S L + DL AA
Sbjct: 388 AQGLISTVESMNLRIPIIARLQGTNMEAAHQLINDSGLKIFSIDDLQSAA 437
>gi|71003698|ref|XP_756515.1| hypothetical protein UM00368.1 [Ustilago maydis 521]
gi|46095953|gb|EAK81186.1| hypothetical protein UM00368.1 [Ustilago maydis 521]
Length = 460
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/379 (45%), Positives = 233/379 (61%), Gaps = 32/379 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE VIKAQ+LAGGRG GHFD+G K GVH ++ + KMIG+ LITKQT G
Sbjct: 103 KEIVIKAQVLAGGRGKGHFDSGLKGGVHLIKTPEEARDLAAKMIGNHLITKQTGAGGRLC 162
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N VM+A++ E Y ++ DR PV+I S GG IE VAA+ P + T PID +
Sbjct: 163 NAVMIAEARPPHHEYYVAVLNDRATQLPVLIASNQGGMSIEEVAAENPDAIITTPIDFEK 222
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G++ A IA L F G + + A E
Sbjct: 223 GLSNQDALGIAKKLGFTGAKQEQQAAET-------------------------------- 250
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
QKL+ LF DATQ+EINPL E+ + EV+ +DAK+ FD+NA+FRQ +IF + ++ DP
Sbjct: 251 FQKLYKLFDEKDATQVEINPLAESKDGEVLCMDAKLGFDENADFRQADIFELRDTTQEDP 310
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EVDA+KY LN++ +DGNIGCLVNGAGLAMATMD++KL+GG PANFLDVGG + S+ +
Sbjct: 311 DEVDAAKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDVGGTASAASVKK 370
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF ++ + VK I VN+FGGIV+C IA+G++ A + +SIPLVVRL+GT+ +E K +
Sbjct: 371 AFELLLNSKEVKGIFVNIFGGIVSCKKIAEGIIQATQELDMSIPLVVRLQGTHEKEAKEL 430
Query: 406 LDESKLPLIFASDLDEAAS 424
+ S L + LDEAA+
Sbjct: 431 IKNSNLKIFAFDGLDEAAA 449
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + +SIPLVVRL+GT+ +E K ++ S L + LDEAA
Sbjct: 399 AEGIIQATQELDMSIPLVVRLQGTHEKEAKELIKNSNLKIFAFDGLDEAA 448
>gi|365765491|gb|EHN06999.1| Lsc2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 427
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 234/389 (60%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GN+GCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNVGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422
>gi|342882200|gb|EGU82928.1| hypothetical protein FOXB_06481 [Fusarium oxysporum Fo5176]
Length = 447
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 180/414 (43%), Positives = 249/414 (60%), Gaps = 34/414 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A I + + + VIKAQ+LAGGRG G FDNG K GV + + E+MIGH
Sbjct: 64 AKEAKEIAEKIGNDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFAEQMIGHN 123
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y I+ DR + PV++ S GG DIE VA +T
Sbjct: 124 LITKQTGAGGRLCNAVYICERKFARREFYLAILMDRQNQCPVIVSSSQGGMDIETVAKET 183
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID++ G+T+ +A++IA L F Q I +
Sbjct: 184 PDAINTNYIDINVGVTDEVAREIATKLGFS----------------------EQCIEE-- 219
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +QKL+ +F D+TQ+EINPL ET + +V+ +DAK FDDNAEFRQK
Sbjct: 220 ---------AKDTIQKLYKIFTEKDSTQIEINPLSETSDHKVLCMDAKFGFDDNAEFRQK 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++F + ++ DP EV A++ NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 271 DVFEWRDTTQEDPDEVRAAESNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD+ V I VN+FGGIV C IA GL+ +S L IP++
Sbjct: 331 DVGGGATPAAIREAFELITSDAKVTAIFVNIFGGIVRCDAIATGLIKTVESMNLRIPIIA 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKSFKLSIPLVVRLEGT 445
RL+GTNV++ +++++S L + DL AA V K K++ + V +E T
Sbjct: 391 RLQGTNVEQAHQLINDSGLKIFSIDDLQTAAEKAVQLSKVVKMARDIDVGVEFT 444
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ +S L IP++ RL+GTNV++ +++++S L + DL AA
Sbjct: 372 ATGLIKTVESMNLRIPIIARLQGTNVEQAHQLINDSGLKIFSIDDLQTAA 421
>gi|54261767|ref|NP_998191.1| succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Danio rerio]
gi|37748067|gb|AAH59701.1| Succinate-CoA ligase, ADP-forming, beta subunit [Danio rerio]
Length = 466
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/409 (44%), Positives = 246/409 (60%), Gaps = 40/409 (9%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNN 77
P V ST ++A TA K + K+ VIKAQ+LAGGRG G F+ G K GV +
Sbjct: 75 PAGMVASTP----DEAYTAA---KQIGSKDLVIKAQVLAGGRGKGTFEGGLKGGVRIVYS 127
Query: 78 VQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVII 137
++ I KMIG KL TKQT + G N+V V + RE YF I +R + GPV+I
Sbjct: 128 PEEARDISSKMIGKKLFTKQTGEAGRICNQVFVCERRYPRREYYFAITMERSYQGPVLIG 187
Query: 138 SPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLW 197
S GG +IE+VAA+ P + PID+ +GI + Q I
Sbjct: 188 SSQGGVNIEDVAAENPDAIVKEPIDIVEGI--KMDQAI---------------------- 223
Query: 198 NLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISV 257
K+A+ + F L +AA + KL+++F+ DA+ +EINP+VE V+ +
Sbjct: 224 ---------KVAEKMGFPPALINEAAENMLKLYDVFIKYDASMVEINPMVEDSSGIVMCM 274
Query: 258 DAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMAT 317
DAKINFD NA +RQK +F + S+ D R+ A+K +LNY+G+DG IGCLVNGAGLAMAT
Sbjct: 275 DAKINFDSNAAYRQKKVFDMRDWSQEDARDRQAAKADLNYIGLDGTIGCLVNGAGLAMAT 334
Query: 318 MDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGL 377
MDIIKLHGG PANFLDVGGG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G+
Sbjct: 335 MDIIKLHGGTPANFLDVGGGATAQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGI 394
Query: 378 VNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+ A L IP+VVRL+GT V + K ++ S L ++ DLDEAA +V
Sbjct: 395 IMAVTDLDLKIPIVVRLQGTRVDDAKALIAASPLKILACDDLDEAAKMV 443
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 391 AQGIIMAVTDLDLKIPIVVRLQGTRVDDAKALIAASPLKILACDDLDEAAKMVV 444
>gi|156778117|gb|ABU95433.1| Scs beta, partial [Sawyeria marylandensis]
Length = 415
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/387 (44%), Positives = 236/387 (60%), Gaps = 32/387 (8%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTG 102
LN ++V+KAQILAGGRG G F +G+K GV + V+++ + KMIG+ L+T Q+ G
Sbjct: 58 LNEPKFVVKAQILAGGRGKGTFKDGYKGGVKLVDTVEEVQEVASKMIGNVLVTIQSGAEG 117
Query: 103 INVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
V+KV V + RE Y I+ DR GPV+I S GG IE+VA TP L+ +P+D
Sbjct: 118 KPVHKVFVQGCIQAKRELYVAILLDRETKGPVIIASTQGGMSIEDVARDTPELILKLPVD 177
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
+ +G+ E + D L+F +LK K
Sbjct: 178 IKKGVDEKKLAVLVDGLKFT--------------------------------TKELKNKC 205
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
T ++ L+ F D+ +EINPL+ET + V+ DAKIN DDNA +RQK IFS + ++
Sbjct: 206 MTVIKNLYTAFCKTDSVLMEINPLIETPDGNVVCADAKINIDDNAFYRQKEIFSLRDEAQ 265
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
D R+V+ASK+ LNY+G+ GNI LVNGAGLAMATMDIIK +G EPANFLD GGG +++
Sbjct: 266 EDSRDVEASKHGLNYIGLFGNIANLVNGAGLAMATMDIIKYYGAEPANFLDCGGGSSKDQ 325
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
+ AF+I+ D VK ILVN+FGGI C IA G+++A K L IPLVVRLEGTN +EG
Sbjct: 326 VEAAFKILKKDKRVKAILVNIFGGITKCDVIASGIIDAVKEVGLDIPLVVRLEGTNAEEG 385
Query: 403 KRILDESKLPLIFASDLDEAASLVNAC 429
++++ES L I A +LD+AA V C
Sbjct: 386 IKLVNESGLKCITAKNLDDAAQKVVQC 412
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +++A K L IPLVVRLEGTN +EG ++++ES L I A +LD+AA +
Sbjct: 357 ASGIIDAVKEVGLDIPLVVRLEGTNAEEGIKLVNESGLKCITAKNLDDAAQKVV 410
>gi|322692276|gb|EFY84205.1| putative succinyl-CoA ligase [Metarhizium acridum CQMa 102]
Length = 473
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 177/403 (43%), Positives = 241/403 (59%), Gaps = 38/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K++ ++ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHK
Sbjct: 64 AEEAKAVAKEIGTEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFAQQMIGHK 123
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y I+ DR PV++ S GG DIE VA ++
Sbjct: 124 LITKQTGAGGRLCNAVYICERKFARREFYLAILMDRASQSPVIVSSSQGGMDIETVAKES 183
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID++ G+T+ +A+ IA L F Q I D
Sbjct: 184 PDAIITTYIDINTGVTDDIARGIATKLGFS----------------------EQCIED-- 219
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +QKL+ +F+ D+TQ+EINPL ET++ +V+ +DAK FDDNA FRQK
Sbjct: 220 ---------AKDTIQKLYKIFVERDSTQIEINPLSETNDHQVLCMDAKFGFDDNANFRQK 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + ++ DP EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 271 EVFEWRDTTQEDPDEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+ ++ L IP++
Sbjct: 331 DVGGGATPAAIQEAFELITSDPKVTAIFVNIFGGIVRCDHIATGLIKTVENLNLKIPIIA 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
RL+GTNV+ +I++ES + + DL AA KS +LS
Sbjct: 391 RLQGTNVERAHKIINESGMKIFSIDDLQSAAE-----KSVQLS 428
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ ++ L IP++ RL+GTNV+ +I++ES + + DL AA
Sbjct: 372 ATGLIKTVENLNLKIPIIARLQGTNVERAHKIINESGMKIFSIDDLQSAA 421
>gi|323507901|emb|CBQ67772.1| probable beta-succinyl CoA synthetase precursor [Sporisorium
reilianum SRZ2]
Length = 426
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/379 (45%), Positives = 236/379 (62%), Gaps = 32/379 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE VIKAQ+LAGGRG GHFD+G + GVH ++ + KMIG+KLITKQT G
Sbjct: 69 KEIVIKAQVLAGGRGKGHFDSGLQGGVHLIKTPEEARDLAAKMIGNKLITKQTGAAGRLC 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N VM+A++ E Y ++ DR PV+I S GG IE VAA+ P + T PID +
Sbjct: 129 NAVMIAEARPPHHEYYVAVLNDRATQLPVLIASNQGGMSIEEVAAENPDAIITTPIDFEK 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+++ A IA L F G + + A E
Sbjct: 189 GLSKEDALGIAKKLGFTGVKQEEQAAET-------------------------------- 216
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
QKL+ LF DATQ+EINPL E+ + EV+ +DAK+ FD+NA+FRQ ++F + ++ DP
Sbjct: 217 FQKLYKLFDEKDATQVEINPLAESKDGEVLCMDAKLGFDENADFRQADVFELRDTTQEDP 276
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EV+A+KY LN++ +DGNIGCLVNGAGLAMATMD++KL+GG PANFLDVGG + S+ +
Sbjct: 277 DEVEAAKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDVGGTASASSVKK 336
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF ++ + + VK I VN+FGGIV+C IA+G++ A + L+IPLVVRL+GT+ +E K +
Sbjct: 337 AFELLLNSNEVKGIFVNIFGGIVSCKKIAEGIIQATQELDLTIPLVVRLQGTHEKEAKEL 396
Query: 406 LDESKLPLIFASDLDEAAS 424
+ S L + LDEAA+
Sbjct: 397 IKSSNLKIFAFDGLDEAAA 415
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + L+IPLVVRL+GT+ +E K ++ S L + LDEAA
Sbjct: 365 AEGIIQATQELDLTIPLVVRLQGTHEKEAKELIKSSNLKIFAFDGLDEAA 414
>gi|45361311|ref|NP_989233.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus (Silurana)
tropicalis]
gi|38969875|gb|AAH63370.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus (Silurana)
tropicalis]
Length = 460
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/391 (44%), Positives = 239/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K++ K+ V+KAQ+LAGGRG G F+ G K GV + ++ I +MIG KL T
Sbjct: 80 AFTVAKEIGSKDLVVKAQVLAGGRGKGTFEGGLKGGVKIVYSPEEAKDIASQMIGKKLFT 139
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N V + + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 140 KQTGEKGRICNHVFICERRYPRREYYFAIAMERAFQGPVLIGSSHGGVNIEDVAAENPDA 199
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A +A+ + F ++ +AA N ++
Sbjct: 200 IVKEPIDIVEGIKKEQAVRLAEKMGFPSNIVDEAA-------NCMIN------------- 239
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+NLF+ DAT +EINP+VE V+ +DAKINFD NA +RQK +F
Sbjct: 240 -------------LYNLFMKYDATMVEINPMVEDASGVVMCMDAKINFDSNAAYRQKEVF 286
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ D R+ A+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 287 ELRDWSQEDERDRQAAKSDLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 346
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AFR+I+SD V ILVN+FGGI+ C IA+G++ A K +L IP+VVRL+
Sbjct: 347 GGATVHQVTEAFRLITSDKKVLAILVNIFGGIMRCDVIAQGIIMAVKDLELRIPIVVRLQ 406
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 407 GTRVDDAKALITASGLKILACDDLDEAAKMV 437
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K +L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 385 AQGIIMAVKDLELRIPIVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 438
>gi|302694909|ref|XP_003037133.1| hypothetical protein SCHCODRAFT_47353 [Schizophyllum commune H4-8]
gi|300110830|gb|EFJ02231.1| hypothetical protein SCHCODRAFT_47353, partial [Schizophyllum
commune H4-8]
Length = 402
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/375 (45%), Positives = 238/375 (63%), Gaps = 33/375 (8%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQ+LAGGRG G FDNGFK GVH ++ ++ + KM+G KLITKQT + G N V
Sbjct: 53 VVKAQVLAGGRGKGMFDNGFKGGVHMASSANEVENLAGKMLGAKLITKQTGERGRPCNTV 112
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
M+A++ E Y ++ DR+ G V++ S GG +IE VAAK P + T PID +G++
Sbjct: 113 MIAEAREPAHEYYVAVLNDRVTQGIVLVASAQGGMNIEEVAAKDPDAIITTPIDFDKGLS 172
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ IA L F+ +L+A+AA +F
Sbjct: 173 IEEGKAIAAKLGFKPELQAEAA-------GIF--------------------------SN 199
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L +F DATQ+EINPL ET + V+ +DAK FD+NAEFRQK+IF+ ++S+ +P EV
Sbjct: 200 LVKIFKEKDATQIEINPLAETKDGAVLCMDAKFGFDENAEFRQKDIFALRDISQEEPSEV 259
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+A+K LN++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFLDVGGG +++ +AF
Sbjct: 260 EAAKAGLNFIKLDGSIGCLVNGAGLAMATMDVLALHGGNPANFLDVGGGATPDTVKKAFE 319
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
++ SD VK I +N+FGGI+ C IA+G++ A K +++IPLVVRL+GT E K ++ E
Sbjct: 320 LLLSDPKVKSIFINIFGGIMRCDYIAEGVIKATKELQMTIPLVVRLKGTKEAEAKAMIKE 379
Query: 409 SKLPLIFASDLDEAA 423
S L +I LD+AA
Sbjct: 380 SGLKIIAFDGLDDAA 394
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K +++IPLVVRL+GT E K ++ ES L +I LD+AA +
Sbjct: 345 AEGVIKATKELQMTIPLVVRLKGTKEAEAKAMIKESGLKIIAFDGLDDAAERAV 398
>gi|380024288|ref|XP_003695933.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Apis florea]
Length = 448
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 238/390 (61%), Gaps = 34/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + DL K+ V+KAQ+LAGGRG GHF SGV ++ + +M+G LIT
Sbjct: 67 AAKLAADLKSKDIVLKAQVLAGGRGKGHFKGTNISGVKMCETPEEAKKLASQMLGKLLIT 126
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA P
Sbjct: 127 KQTGEAGRICNAVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATNPSA 186
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+++GIT+ A+ IA L Q + D++
Sbjct: 187 IMYEPIDIYKGITKDQAERIAVKLGLQ------------------------NVKDYI--- 219
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ + L+ +FL DA LE+NPL E + ++D K FDDNAEFRQK +F
Sbjct: 220 -------SNIIMNLYQMFLKKDALLLEVNPLAEDVNGQYFALDCKCRFDDNAEFRQKELF 272
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D +EV+A+KY+LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFLDVG
Sbjct: 273 SLRDWTQEDIKEVEAAKYDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 332
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + ++ +AF+II+SDS V +LVN+FGGI+ C IA+G++ A K L IP+VVRL+
Sbjct: 333 GGASTSAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 392
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASL 425
GTNV E K ++ + L ++ DLDEAA +
Sbjct: 393 GTNVDEAKALIANAGLKIVPIDDLDEAARV 422
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 371 AEGIIAATKELSLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAA 420
>gi|402076043|gb|EJT71466.1| succinyl-CoA ligase subunit beta [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 444
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/406 (44%), Positives = 242/406 (59%), Gaps = 41/406 (10%)
Query: 33 ARTAT---NILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ARTA + KD++ + VIKAQ+LAGGRG G FDNG K GV + + ++MI
Sbjct: 58 ARTAAEAEKVAKDISSDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFADQMI 117
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GHKLITKQT G N V + + RE Y ++ DR GPV++ S GG DIE VA
Sbjct: 118 GHKLITKQTGAGGRLCNAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVA 177
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+ P + T ID+++G+T+ +A+ IA L F Q I
Sbjct: 178 KENPDAITTTYIDINKGVTDDVARGIAQDLGFS----------------------EQCIE 215
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+ A +QKL+ +FL D TQ+EINPL ET + +V+ +DAK FDDNA+F
Sbjct: 216 E-----------AKDTIQKLYKIFLEKDMTQIEINPLSETSDHQVMCMDAKFGFDDNADF 264
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK IF + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PA
Sbjct: 265 RQKEIFELRDTTQEDADEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPA 324
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+ KS L IP
Sbjct: 325 NFLDVGGGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDHIANGLIQTVKSLNLKIP 384
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
++ RL+GTN+++ +I+++S + + DL AA KS +LS
Sbjct: 385 IIARLQGTNMEQAHQIINDSGMKIFSIDDLQNAAE-----KSVQLS 425
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ KS L IP++ RL+GTN+++ +I+++S + + DL AA
Sbjct: 369 ANGLIQTVKSLNLKIPIIARLQGTNMEQAHQIINDSGMKIFSIDDLQNAA 418
>gi|66548261|ref|XP_624343.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Apis mellifera]
Length = 448
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 238/390 (61%), Gaps = 34/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + DL K+ V+KAQ+LAGGRG GHF SGV ++ + +M+G LIT
Sbjct: 67 AAKLAADLKSKDIVLKAQVLAGGRGKGHFKGTNISGVKMCETPEEAKKLASQMLGKLLIT 126
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA P
Sbjct: 127 KQTGEAGRICNAVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATNPSA 186
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+++GIT+ A+ IA L Q + D++
Sbjct: 187 IMYEPIDIYKGITKDQAERIAIKLGLQ------------------------NVKDYI--- 219
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ + L+ +FL DA LE+NPL E + ++D K FDDNAEFRQK +F
Sbjct: 220 -------SNIIVNLYQMFLKKDALLLEVNPLAEDVNGQYFALDCKCRFDDNAEFRQKELF 272
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D +EV+A+KY+LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFLDVG
Sbjct: 273 SLRDWTQEDTKEVEAAKYDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 332
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + ++ +AF+II+SDS V +LVN+FGGI+ C IA+G++ A K L IP+VVRL+
Sbjct: 333 GGASTSAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 392
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASL 425
GTNV E K ++ + L ++ DLDEAA +
Sbjct: 393 GTNVDEAKALIANAGLKIVPIDDLDEAARV 422
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 371 AEGIIAATKELSLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAA 420
>gi|154289904|ref|XP_001545556.1| ATP-specific succinyl-CoA synthetase beta subunit [Botryotinia
fuckeliana B05.10]
gi|347831772|emb|CCD47469.1| similar to succinyl-CoA ligase subunit beta [Botryotinia
fuckeliana]
Length = 445
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/377 (44%), Positives = 232/377 (61%), Gaps = 33/377 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKL+TKQT G N
Sbjct: 76 DMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFADQMIGHKLVTKQTGAQGRICN 135
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
V + + RE Y I+ DR GPV++ S GG DIE VA ++P+ + T ID+H+G
Sbjct: 136 SVYICERKFARREFYLAILMDRASQGPVIVSSSQGGMDIETVAKESPNAITTTYIDIHKG 195
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+T+ +A+ I + F +A VQKL+ +F+
Sbjct: 196 VTDDIARKIVTDIGFSEQCIEEAKDTVQKLYKIFMEK----------------------- 232
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK +F + ++ D
Sbjct: 233 ----------DATQIEINPLSETSDHKVLAMDAKLGFDDNAEFRQKEVFEWRDTTQEDAE 282
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV A++ LN++ + G+IGCLVNGAGLAMATMDIIKL+GGEPANFLDVGGG ++I +A
Sbjct: 283 EVRAAESGLNFIKLGGDIGCLVNGAGLAMATMDIIKLNGGEPANFLDVGGGATPQAIKEA 342
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F +I+SD V I VN+FGGIV C IA+GL++ +S L IP++ RL+GTN++ +++
Sbjct: 343 FTLITSDPKVTAIFVNIFGGIVRCDAIAQGLISTVESMNLRIPIIARLQGTNMEAAHKLI 402
Query: 407 DESKLPLIFASDLDEAA 423
++S L + DL AA
Sbjct: 403 NDSGLKIFSIDDLQSAA 419
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ +S L IP++ RL+GTN++ +++++S L + DL AA
Sbjct: 370 AQGLISTVESMNLRIPIIARLQGTNMEAAHKLINDSGLKIFSIDDLQSAA 419
>gi|323337464|gb|EGA78713.1| Lsc2p [Saccharomyces cerevisiae Vin13]
Length = 427
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 233/389 (59%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GL A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLXEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA
Sbjct: 369 ALGLXEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAA 418
>gi|348524076|ref|XP_003449549.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Oreochromis niloticus]
Length = 466
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/391 (44%), Positives = 240/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K + K+ V+KAQ+LAGGRG G F+ G K GV + ++ I +MIG KL T
Sbjct: 86 AYAVAKQIGSKDLVVKAQVLAGGRGKGTFEGGLKGGVRIVYSPEEARDISSQMIGRKLYT 145
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V + + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 146 KQTGEAGRICNQVFICERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAENPDA 205
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI K + A +V AQK+ F
Sbjct: 206 IVKEPIDIVEGI------------------KMEQAVKV-----------AQKMG----FP 232
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L +AA + KL+NLF+ DA+ +EINP+VE V+ +DAKINFD NA +RQ+ +F
Sbjct: 233 PALVNEAAETMVKLYNLFIKYDASMVEINPMVEDSSGIVMCMDAKINFDSNAAYRQQKVF 292
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ DPR+ A+K +LNY+G+DG IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 293 ELRDWTQEDPRDRQAAKADLNYIGLDGTIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 352
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V+ ILVN+FGGI+ C IA+G++ A + L IP+VVRL+
Sbjct: 353 GGATAHQVTEAFKLITSDRKVQAILVNIFGGIMRCDVIAQGIIMAVRDLDLKIPIVVRLQ 412
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 413 GTRVDDAKALIAASPLKILACDDLDEAAKMV 443
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A + L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 391 AQGIIMAVRDLDLKIPIVVRLQGTRVDDAKALIAASPLKILACDDLDEAAKMVV 444
>gi|323348487|gb|EGA82732.1| Lsc2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 427
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/389 (43%), Positives = 233/389 (59%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GL A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLXEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLXEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422
>gi|395521048|ref|XP_003764633.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial [Sarcophilus harrisii]
Length = 643
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/391 (45%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L + VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 263 AYAIAKKLGSNDIVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSAQMIGKKLFT 322
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 323 KQTGEKGRICNNVLVCERRYPRREYYFAITMERTFQGPVLIGSSQGGVNIEDVAAENPEA 382
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + Q A ++A + F
Sbjct: 383 IFKEPIDIMEGI--KMEQ-------------------------------AARLARNMGFP 409
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L AA + KL+ LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 410 SNLVDSAAENMMKLYELFLKYDATMVEINPMVEDADGGVLCMDAKINFDSNSYYRQKKIF 469
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ +A+K ++NY+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 470 DLQDWTQEDERDKEAAKADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 529
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + QAF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 530 GGATVDQVTQAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 589
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 590 GTRVDDAKALIADSGLKILACDDLDEAAKMV 620
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 568 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 621
>gi|409083084|gb|EKM83441.1| hypothetical protein AGABI1DRAFT_110105 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 415
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 246/398 (61%), Gaps = 37/398 (9%)
Query: 31 EDART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E A+T A ++ K+ + VIKAQ+LAGGRG G FD+G + GV + Q E+
Sbjct: 44 EAAKTPQEAYDVAKNFGNDKLVIKAQVLAGGRGKGKFDSGLQGGVQMVDGPQQAKQYAEQ 103
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIG KLITKQT G N VM+A+ E Y ++ DR G V++ S GG +IE
Sbjct: 104 MIGAKLITKQTGAAGRICNAVMLAERRPPAHEYYVAVLNDRKSQGVVLVTSAQGGMNIEE 163
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQG-DLKAKAATEVQKLWNLFLSSLAQ 206
VAAK P + T PI G++++ A ++A L F DL+++AA N+F++
Sbjct: 164 VAAKDPEAIITTPISFEHGLSKAEAMEVAKKLGFSNEDLQSQAA-------NIFIN---- 212
Query: 207 KIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDN 266
L+ +F DATQ+EINP+ + EV+ +DAK FDDN
Sbjct: 213 ----------------------LYKIFKEKDATQIEINPMALAKDGEVLCMDAKFGFDDN 250
Query: 267 AEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
AEFRQK+IF+ ++++ +P EV+A K NLN++ +DG+IGCLVNGAGLAMATMD++ LHGG
Sbjct: 251 AEFRQKDIFALRDITQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLSLHGG 310
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKL 386
PANFLDVGGG +++ +AF I+ SD VK I +N+FGGI+ C IA+G++ A K L
Sbjct: 311 NPANFLDVGGGATPDTVKKAFEILLSDPKVKSIFINIFGGIMRCDYIAEGVIKATKELGL 370
Query: 387 SIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
+IPLVVRL+GT +E K+++ ES L ++ LD+AA+
Sbjct: 371 TIPLVVRLKGTKEEEAKQMIKESGLKIVAFDSLDDAAA 408
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L+IPLVVRL+GT +E K+++ ES L ++ LD+AA
Sbjct: 358 AEGVIKATKELGLTIPLVVRLKGTKEEEAKQMIKESGLKIVAFDSLDDAA 407
>gi|344230472|gb|EGV62357.1| succinate-CoA ligase [Candida tenuis ATCC 10573]
Length = 414
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/388 (44%), Positives = 238/388 (61%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L E VIKAQ L GGRG GHFDNGF+ GV ++ ++ + EKM+ HKLIT
Sbjct: 50 AYQAAKNLGTNELVIKAQALTGGRGKGHFDNGFQGGVKVISSPEEAQELAEKMLNHKLIT 109
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V V + + + E Y I+ DR P+++ S GG DIE VAA P
Sbjct: 110 KQTGAAGKEVTAVYICERRDALTEAYLAILLDRSTQLPMIVASAQGGMDIEGVAAADPTA 169
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+KT + + G++++LA ++A L + +A E
Sbjct: 170 IKTFSVPLGGGVSDALATEVASVLGY----TPEAIPE----------------------- 202
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
AA VQ L+ +F D TQ+EINPL ET + +V+++DAK+ FDDNA FRQK +F
Sbjct: 203 ------AAKAVQNLYKVFQERDCTQVEINPLSETPDHQVLAMDAKLGFDDNASFRQKEVF 256
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ DP+EV+A++Y LN++ +DGNI +VNGAGLAMATMDIIKL+GGEPANFLD G
Sbjct: 257 SWRDPTQEDPQEVEAAEYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGEPANFLDCG 316
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G ++I +AF +I SD V I VN+FGGIV C +A+GL+ A K+F L IP+VVRL+
Sbjct: 317 GTATPQTIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFNLDIPVVVRLQ 376
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN+++ K +++ S L L DLD AA
Sbjct: 377 GTNMEKAKELINNSGLKLYAFEDLDPAA 404
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F L IP+VVRL+GTN+++ K +++ S L L DLD AA +
Sbjct: 355 AEGLIAATKNFNLDIPVVVRLQGTNMEKAKELINNSGLKLYAFEDLDPAAEKIV 408
>gi|225681391|gb|EEH19675.1| succinyl-CoA ligase beta-chain [Paracoccidioides brasiliensis Pb03]
gi|226288516|gb|EEH44028.1| succinyl-CoA ligase subunit beta [Paracoccidioides brasiliensis
Pb18]
Length = 444
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 237/396 (59%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K + + VIKAQ+LAGGRG G FDNG K GV + + +
Sbjct: 56 EVARTAEEAEAVAKQIGVDDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAAQ 115
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGH+L+TKQT G N V + + RE Y I+ DR PV++ S GG DIE
Sbjct: 116 MIGHRLVTKQTGAQGRLCNAVYICERKFARREFYLAILMDRKSQAPVIVSSSQGGVDIEG 175
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA ++P + T ID++ G+T+ +A +IA L F Q
Sbjct: 176 VAKESPDAITTTHIDINVGVTDQIAANIARDLGFS----------------------EQC 213
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
I D A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK FDDNA
Sbjct: 214 IED-----------AKDTIQKLYKVFMEKDATQIEINPLCETTDHQVLAMDAKFGFDDNA 262
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK +FS + ++ DP E+ A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 263 EFRQKEVFSWRDTTQEDPDELKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGS 322
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++I AF +I+SD V I VN+FGGIV C IA+GL+N L
Sbjct: 323 PANFLDVGGGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLR 382
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 383 TPIVARLQGTNMEQAHKLINDSGLKIFSIEDLQNAA 418
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 369 AQGLINVVNEMNLRTPIVARLQGTNMEQAHKLINDSGLKIFSIEDLQNAA 418
>gi|195054872|ref|XP_001994347.1| GH23962 [Drosophila grimshawi]
gi|193896217|gb|EDV95083.1| GH23962 [Drosophila grimshawi]
Length = 451
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/425 (42%), Positives = 247/425 (58%), Gaps = 39/425 (9%)
Query: 7 QQIANF------SYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRG 60
QQI N SY + S + + ++ + A +I ++L V+KAQ+LAGGRG
Sbjct: 33 QQIRNLNVQEHVSYTLLNESNIPTPRFAVAKNGKEAHDIAQNLKTDNLVLKAQVLAGGRG 92
Query: 61 LGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRET 120
G F NG K GV + KMI L+TKQT G KVMVA+ RE
Sbjct: 93 KGTFKNGLKGGVRVVFDADSAEQYSSKMIDQLLVTKQTGAAGRICKKVMVAERKFPRREF 152
Query: 121 YFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLE 180
YF ++ +R NGPV+I S GG DIE VA + P + PID+ +G+T+ A + + +
Sbjct: 153 YFAVMMERAFNGPVLIASKEGGVDIEEVAKENPDAILYEPIDIVEGLTKEQACRMIEKVG 212
Query: 181 FQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQ 240
G A A ++ L NL + LF+ DA
Sbjct: 213 LGG---AGADEHIEMLMNL------------------------------YKLFVKKDALL 239
Query: 241 LEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGM 300
+EINP E ++DAK+ FDDNAEFRQK +F + ++ DP+EV+A+KYNLNY+ +
Sbjct: 240 VEINPYAEDAMTGFFALDAKLRFDDNAEFRQKELFCMRDWTQEDPKEVEAAKYNLNYIAL 299
Query: 301 DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCIL 360
DG IGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG E++ AF+II+SD V C+L
Sbjct: 300 DGTIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDKKVMCLL 359
Query: 361 VNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLD 420
VN+FGGI+ C IA+G++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD
Sbjct: 360 VNIFGGIMRCDVIAEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRSSGLKILARDDLD 419
Query: 421 EAASL 425
+AA +
Sbjct: 420 KAADM 424
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L++P+VVRL+GT V+E + ++ S L ++ DLD+AA+ +
Sbjct: 373 AEGIIAAAKDLNLNLPIVVRLQGTKVKEARELIRSSGLKILARDDLDKAADMAV 426
>gi|190406750|gb|EDV10017.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Saccharomyces cerevisiae RM11-1a]
Length = 427
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 233/389 (59%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMPHHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422
>gi|405968786|gb|EKC33819.1| Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
[Crassostrea gigas]
Length = 348
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 223/338 (65%), Gaps = 38/338 (11%)
Query: 28 VC--LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPIL 85
VC L++A+TA K+L EYVIKAQILAGGRG G F NGFK GVH T N ++ ++
Sbjct: 13 VCSSLDEAKTAA---KNLKVDEYVIKAQILAGGRGKGVFSNGFKGGVHLTKNPNEVENLV 69
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
M+G KL TKQT G+ V+KVMVA++++I RETYF IV DR H GPV+I S GG DI
Sbjct: 70 SSMLGEKLKTKQTHGDGVKVSKVMVAEALDIARETYFAIVLDRSHAGPVIIGSKHGGMDI 129
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E AA P + P+D+ G+TE +A+ L FQG + +QK
Sbjct: 130 EETAATDPDSIIKEPVDIVTGVTEKQCLSVAEKLGFQG-------SNMQK---------- 172
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
AA ++++L+ LF+ VDATQ+EINP ET + V+ DAKINFDD
Sbjct: 173 ----------------AADQIRRLYELFIKVDATQVEINPFGETPDGRVVCFDAKINFDD 216
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FRQK +F+ ++++E+DPRE++AS+ LNY+ ++G+IGCLVNGAGLAMATMDIIKLHG
Sbjct: 217 NASFRQKEVFAMDDMAETDPREIEASRLKLNYIALEGSIGCLVNGAGLAMATMDIIKLHG 276
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNV 363
GEPANFLDVGGGV+E+ + AF ++ D +V C NV
Sbjct: 277 GEPANFLDVGGGVSEQQVHDAFFLLMGDKHVSCCSNNV 314
>gi|171914561|ref|ZP_02930031.1| succinyl-CoA synthetase subunit beta [Verrucomicrobium spinosum DSM
4136]
Length = 395
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/381 (46%), Positives = 234/381 (61%), Gaps = 33/381 (8%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQ+ AGGRG G F NGFK GVH N ++ I KM+G L+T QT G V+KV
Sbjct: 44 VVKAQVHAGGRGKGTFTNGFKGGVHVINTAEEAQEIAGKMLGQTLVTHQTGPEGKLVSKV 103
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++AKSV+I +E YF I+ DR + +I S GG +IE VA KTP +
Sbjct: 104 LIAKSVDIAKEHYFAILFDRSSSRHAIIASTEGGMNIEEVAEKTPEKI------------ 151
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
I +F+ L+A +KIA L RG L +A
Sbjct: 152 ------IKEFVHPTLGLQAYQC---------------RKIAAALGLRGALMTQAVKLFTA 190
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+ L++ D + +E+NPL T + +V+++DAK NFDDNA +RQK+I + + SE DPREV
Sbjct: 191 LYKLYIQSDCSLVEVNPLAITTDNQVVALDAKFNFDDNALYRQKDIVTLRDTSEEDPREV 250
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
AS++ L+Y+G+DGNI CLVNGAGLAM+TMDIIK HGGEPANFLDVGGG +++ + AF+
Sbjct: 251 AASEFGLSYIGLDGNIACLVNGAGLAMSTMDIIKFHGGEPANFLDVGGGASKDQVAAAFK 310
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II D NVK ILVN+FGGI++C IA G++ A + LS+PLVVRLEG NV GK L
Sbjct: 311 IILGDPNVKGILVNIFGGIMDCNVIATGIIAAAQETGLSLPLVVRLEGNNVAAGKETLAN 370
Query: 409 SKLPLIFASDLDEAASLVNAC 429
S L + A DL +AA + A
Sbjct: 371 SGLAITGADDLTDAAQKIVAA 391
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + LS+PLVVRLEG NV GK L S L + A DL +AA + A
Sbjct: 336 ATGIIAAAQETGLSLPLVVRLEGNNVAAGKETLANSGLAITGADDLTDAAQKIVAA 391
>gi|295671817|ref|XP_002796455.1| succinyl-CoA ligase subunit beta [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283435|gb|EEH39001.1| succinyl-CoA ligase subunit beta [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 444
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 236/396 (59%), Gaps = 36/396 (9%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K + + VIKAQ+LAGGRG G FDNG K GV + + +
Sbjct: 56 EVARTAEEAEAVAKQIGVDDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAAQ 115
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGH+L+TKQT G N V + + RE Y I+ DR PV++ S GG DIE
Sbjct: 116 MIGHRLVTKQTGAQGRLCNAVYICERKFARREFYLAILMDRKSQAPVIVSSSQGGVDIEG 175
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +P + T ID++ G+T+ +A +IA L F Q
Sbjct: 176 VAKDSPDAITTTHIDINVGVTDQMAANIARDLGFS----------------------EQC 213
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
I D A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK FDDNA
Sbjct: 214 IED-----------AKDTIQKLYKVFMEKDATQIEINPLCETTDHQVLAMDAKFGFDDNA 262
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK +FS + ++ DP E+ A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 263 EFRQKEVFSWRDTTQEDPDELKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGS 322
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++I AF +I+SD V I VN+FGGIV C IA+GL+N L
Sbjct: 323 PANFLDVGGGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLR 382
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 383 TPIVARLQGTNMEQAHKLINDSGLKIFSIEDLQNAA 418
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+++ +++++S L + DL AA
Sbjct: 369 AQGLINVVNEMNLRTPIVARLQGTNMEQAHKLINDSGLKIFSIEDLQNAA 418
>gi|145248642|ref|XP_001400660.1| succinyl-CoA ligase [GDP-forming] subunit beta [Aspergillus niger
CBS 513.88]
gi|134081327|emb|CAK41830.1| unnamed protein product [Aspergillus niger]
gi|350639189|gb|EHA27543.1| hypothetical protein ASPNIDRAFT_53725 [Aspergillus niger ATCC 1015]
Length = 443
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 230/391 (58%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG G FDNG K GV + + +MIG K
Sbjct: 60 AEEAEAVAKSLGNDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFASQMIGQK 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR PV++ S GG DIE VA +
Sbjct: 120 LITKQTGAAGRLCNSVYICERKFARREFYLAVLMDRASQSPVIVASSQGGMDIEAVAKEN 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+ G+T+++A I L F +A +QKL+ +F+
Sbjct: 180 PEAIITTPIDIKVGVTDAIAHKIVTELGFSEQCVEEAKDTIQKLYKVFMEK--------- 230
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 231 ------------------------DATQIEINPLSETSDHKVMAMDAKLGFDDNAEFRQK 266
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 267 EVFSWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFL 326
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P+V
Sbjct: 327 DVGGGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMGLRTPIVA 386
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ ++++ES L + DL AA
Sbjct: 387 RLQGTNMEQAHKLINESGLKIFSIEDLQSAA 417
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ ++++ES L + DL AA
Sbjct: 368 AQGLINVVQEMGLRTPIVARLQGTNMEQAHKLINESGLKIFSIEDLQSAA 417
>gi|426201865|gb|EKV51788.1| succinyl-CoA synthetase beta chain SSC-beta [Agaricus bisporus var.
bisporus H97]
Length = 415
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/398 (43%), Positives = 246/398 (61%), Gaps = 37/398 (9%)
Query: 31 EDART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E A+T A ++ K+ + VIKAQ+LAGGRG G FD+G + GV + Q E+
Sbjct: 44 EAAKTPQEAYDVAKNFGNDKLVIKAQVLAGGRGKGKFDSGLQGGVQMVDGPQQAKQYAEQ 103
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIG KLITKQT G N VM+A+ E Y ++ DR G V++ S GG +IE
Sbjct: 104 MIGAKLITKQTGAAGRICNAVMLAERRPPAHEYYVAVLNDRKSQGVVLVTSAQGGMNIEE 163
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQG-DLKAKAATEVQKLWNLFLSSLAQ 206
VAAK P + T PI G++++ A ++A L F DL+++AA N+F++
Sbjct: 164 VAAKDPDAIITTPISFEHGLSKAEAMEVAKKLGFSNEDLQSQAA-------NIFIN---- 212
Query: 207 KIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDN 266
L+ +F DATQ+EINP+ + EV+ +DAK FDDN
Sbjct: 213 ----------------------LYKIFKEKDATQIEINPMALAKDGEVLCMDAKFGFDDN 250
Query: 267 AEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
AEFRQK+IF+ ++++ +P EV+A K NLN++ +DG+IGCLVNGAGLAMATMD++ LHGG
Sbjct: 251 AEFRQKDIFALRDITQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLSLHGG 310
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKL 386
PANFLDVGGG +++ +AF I+ SD VK I +N+FGGI+ C IA+G++ A K L
Sbjct: 311 NPANFLDVGGGATPDTVKKAFEILLSDPKVKSIFINIFGGIMRCDYIAEGVIKATKELGL 370
Query: 387 SIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
+IPLVVRL+GT +E K+++ ES L ++ LD+AA+
Sbjct: 371 TIPLVVRLKGTKEEEAKQMIKESGLKIVAFDSLDDAAA 408
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L+IPLVVRL+GT +E K+++ ES L ++ LD+AA
Sbjct: 358 AEGVIKATKELGLTIPLVVRLKGTKEEEAKQMIKESGLKIVAFDSLDDAA 407
>gi|340370240|ref|XP_003383654.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Amphimedon queenslandica]
Length = 426
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 164/405 (40%), Positives = 243/405 (60%), Gaps = 33/405 (8%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDI 81
VH E A L + ++KAQ+LAGGRG+GHF++G + G+ ++ ++
Sbjct: 47 VHVPVGYLAESPSAAREAAVKLGGGDVLVKAQVLAGGRGMGHFESGLQGGIQIAHSPEEA 106
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
EKMIG +LITKQT G +KVMV + +I +E YF ++ DR HNGP+++ S G
Sbjct: 107 ESFAEKMIGSRLITKQTGSIGRPCSKVMVCEKQSIKKEFYFALIMDRAHNGPLMVASSEG 166
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G +IE+VA P + P+D+ G+++ AQ++A + F +A+ V
Sbjct: 167 GMNIEDVARDNPDSIIKDPVDITIGMSKEQAQEMARRIGF-------SASSVN------- 212
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
+AA ++ L+ L DAT LEINPL+ET + V+ +DAKI
Sbjct: 213 -------------------RAAEQMMNLYTFLLKKDATMLEINPLIETADGRVLCLDAKI 253
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
N+DDN++FRQK +F + S+ DPR+ A + +NY+G+DG+IGC+VNGAGLAMATMDII
Sbjct: 254 NYDDNSKFRQKEVFEHKDWSQEDPRDAAAGQAGINYIGLDGSIGCMVNGAGLAMATMDII 313
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
K +GG PANFLD+GGG + + + + F I+ SD+NVK I VN+FGGIV C +A G++ A
Sbjct: 314 KHYGGSPANFLDIGGGASFDEVKKGFNILGSDANVKAIFVNIFGGIVRCDVVADGIIAAA 373
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
K KL++P+V+R++G E ++ S L ++ D D AA V
Sbjct: 374 KEMKLNLPVVIRIQGNMQAEANELIKNSGLDMLAVPDFDTAAKTV 418
>gi|442762217|gb|JAA73267.1| Putative succinyl-coa synthetase beta subunit, partial [Ixodes
ricinus]
Length = 474
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/391 (44%), Positives = 238/391 (60%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I + L + VIKA +LAGGRG G FD+G K GV + + I +M+G+ L T
Sbjct: 94 AEEIAQRLGASDVVIKALVLAGGRGKGTFDSGLKGGVKMVFSPSEAKQISSQMLGYTLRT 153
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + GI V+KVMV + + RE YF ++ +R NGP+++ S GG +IE VA + P
Sbjct: 154 KQTGEKGIRVDKVMVTERLYNRREYYFALMMEREFNGPLIVASSQGGVNIEEVAKENPDA 213
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +PI + GI + L F +A E
Sbjct: 214 ILKLPISIDSGIDRDETSKLVKQLGFH-----PSAVE----------------------- 245
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
A T ++ L+N+FL DAT +EINPLVE + +V +DAK FDDNA+FRQK++F
Sbjct: 246 -----GAVTLIENLYNVFLKYDATLVEINPLVEDNHGKVYCLDAKCRFDDNADFRQKDLF 300
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ D RE +A NLNY+ +DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 301 ALRDWTQLDQREREAHDCNLNYIALDGDIGCLVNGAGLAMATMDIIKLHGGSPANFLDVG 360
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AFR+I+SD V+ ILVN+FGGI+ C IA+G++ A ++ L IP+VVRL+
Sbjct: 361 GGATAHQVTEAFRLITSDQKVQAILVNIFGGIMRCDVIAEGVIRAAETLDLKIPIVVRLQ 420
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V E K ++ SKL ++ +LDEAA +V
Sbjct: 421 GTQVDEAKALIATSKLKILACDNLDEAAKMV 451
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A ++ L IP+VVRL+GT V E K ++ SKL ++ +LDEAA +
Sbjct: 399 AEGVIRAAETLDLKIPIVVRLQGTQVDEAKALIATSKLKILACDNLDEAAKMVV 452
>gi|321453347|gb|EFX64591.1| hypothetical protein DAPPUDRAFT_304522 [Daphnia pulex]
Length = 450
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/408 (42%), Positives = 248/408 (60%), Gaps = 35/408 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I+++L+ + V+KAQ+L GGRG GHF G K GV + ++ I KMIG LIT
Sbjct: 71 AQKIVEELDCLDVVVKAQVLTGGRGKGHFKGGLKGGVKTVFSAEEAGDIASKMIGDLLIT 130
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VM+ + RE YF I+ +R + GPV+I S GG +IE VA + P
Sbjct: 131 KQTGEKGRICNSVMITERKYQRREYYFTIMLERAYGGPVLIASTHGGMNIEEVAHENPEA 190
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T P+D+ +G+T+ A +AD L L+S ++ AD
Sbjct: 191 IITEPVDIIKGLTKEQALLVAD--------------------KLGLTSKREEAADMF--- 227
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
KL+NLF+ DAT +EINPL E + +++ +DAK+ FDDNA+FRQ +F
Sbjct: 228 -----------IKLYNLFIKYDATMIEINPLAEDQDGKLMCLDAKMRFDDNADFRQSTVF 276
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ + +EV+A+K+NLNY+ +DG+I CLVNGAGLAMATMDIIKLHGGEPANFLDVG
Sbjct: 277 SYRDWTQENSQEVEAAKFNLNYIALDGDIACLVNGAGLAMATMDIIKLHGGEPANFLDVG 336
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF+II++D V ILVN+FGGI+ C IA+G++ A + P++ RL+
Sbjct: 337 GGATSAQVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIIAANELNIKTPIICRLQ 396
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLE 443
GTNV E K ++ S L ++ +LDEAA L S +S+ RL+
Sbjct: 397 GTNVDEAKVLIANSGLKILPCDNLDEAARLAVKLSSI-VSLAKAARLD 443
>gi|358370634|dbj|GAA87245.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Aspergillus kawachii IFO 4308]
Length = 443
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 230/391 (58%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG G FDNG K GV + + +MIG K
Sbjct: 60 AEEAEAVAKSLGNDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFASQMIGQK 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR PV++ S GG DIE VA +
Sbjct: 120 LITKQTGAAGRLCNSVYICERKFARREFYLAVLMDRASQSPVIVASSQGGMDIEAVAKEN 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+ G+T+++A I L F +A +QKL+ +F+
Sbjct: 180 PEAIITTPIDIKVGVTDAIAHKIVTELGFSEQCVEEAKDTIQKLYKVFMEK--------- 230
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 231 ------------------------DATQIEINPLSETSDHKVMAMDAKLGFDDNAEFRQK 266
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + ++ D EV A+++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFL
Sbjct: 267 EVFSWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFL 326
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I AF +I+SD V I VN+FGGIV C IA+GL+N + L P+V
Sbjct: 327 DVGGGATPAAIKSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVQEMGLRTPIVA 386
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RL+GTN+++ ++++ES L + DL AA
Sbjct: 387 RLQGTNMEQAHKLINESGLKIFSIEDLQSAA 417
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ ++++ES L + DL AA
Sbjct: 368 AQGLINVVQEMGLRTPIVARLQGTNMEQAHKLINESGLKIFSIEDLQSAA 417
>gi|389751736|gb|EIM92809.1| succinate-CoA ligase [Stereum hirsutum FP-91666 SS1]
Length = 416
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 170/375 (45%), Positives = 237/375 (63%), Gaps = 33/375 (8%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
VIKAQ+LAGGRG G FDNG + GVH + ++ ++M+G KLITKQT G N V
Sbjct: 66 VIKAQVLAGGRGKGKFDNGLQGGVHKVASAEEAQKYAKQMLGAKLITKQTGAGGRVCNAV 125
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
M+A+ + T E Y ++ DR++ V++ S GG +IE VAAK P + T PI ++G+
Sbjct: 126 MLAERRDPTHEYYVAVLNDRVNQSAVLVASSQGGMNIEEVAAKDPSAIITTPIP-YEGLP 184
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
E A ++A L F K A ++ ++F++
Sbjct: 185 EDKALEVAAKLGF------KTAEAQKEAADIFIN-------------------------- 212
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+ +F DATQ+EINP+ ET + V+ +DAK FDDNAEFRQK+IF +VS+ +P EV
Sbjct: 213 LYKIFKDKDATQIEINPMAETADGHVLCMDAKFGFDDNAEFRQKDIFELRDVSQEEPSEV 272
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+A K+NLN++ +DGNIGCLVNGAGLAMATMD++ LHGG+PANFLDVGGG E++ +AF
Sbjct: 273 EAQKFNLNFIKLDGNIGCLVNGAGLAMATMDVLALHGGQPANFLDVGGGATPETVKKAFE 332
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
I+ +D VK I +N+FGGI+ C IA+G++ A K +L IPLVVRL+GT E K ++ +
Sbjct: 333 ILLADPKVKSIFINIFGGIMRCDYIAEGVIKATKELQLEIPLVVRLKGTKEAEAKEMIRQ 392
Query: 409 SKLPLIFASDLDEAA 423
S L +I LD+AA
Sbjct: 393 SGLKIIPFDSLDDAA 407
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K +L IPLVVRL+GT E K ++ +S L +I LD+AA
Sbjct: 358 AEGVIKATKELQLEIPLVVRLKGTKEAEAKEMIRQSGLKIIPFDSLDDAA 407
>gi|431902373|gb|ELK08874.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Pteropus alecto]
Length = 485
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/413 (44%), Positives = 243/413 (58%), Gaps = 55/413 (13%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IVKEPIDIVEGIKKESA-----------------------------VRLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PGVVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DASK +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLRDWTQEDERDKDASKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSN----------------------VKCILVNVFGGIVNCATI 373
GG + +AF++I+SD V ILVN+FGGI+ C I
Sbjct: 350 GGATVHQVTEAFKLITSDKKKDEEVLDKGSVSKNEAKKSHLEVLAILVNIFGGIMRCDVI 409
Query: 374 AKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
A+G+V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMV 462
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 410 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 463
>gi|67541673|ref|XP_664604.1| hypothetical protein AN7000.2 [Aspergillus nidulans FGSC A4]
gi|40742456|gb|EAA61646.1| hypothetical protein AN7000.2 [Aspergillus nidulans FGSC A4]
Length = 456
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/407 (42%), Positives = 237/407 (58%), Gaps = 49/407 (12%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG GHFDNG K GV + + +MIGHK
Sbjct: 57 AEEAEKVAKSLGNDDMVIKAQVLAGGRGKGHFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 116
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR GPV++ S GG DIE VA +
Sbjct: 117 LITKQTGAGGRLCNAVFIVERKFARREFYLAVLMDRKTQGPVIVASSQGGMDIEAVAKEN 176
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID++ G+T+++A IA+ L F +++ D
Sbjct: 177 PDAIITTPIDINVGVTDAIATKIANELGF-----------------------SEQCVD-- 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +Q L+ F+ DATQ+EINPL ET + +V+++DAK+ FDDNAEFRQK
Sbjct: 212 --------DAKKTIQNLYKAFMETDATQIEINPLSETSDHQVLAMDAKLGFDDNAEFRQK 263
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCL----------------VNGAGLAMA 316
IFS + ++ D EV A+++ LN++ +DG+IGCL VNGAGLAMA
Sbjct: 264 EIFSWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLGVYPRPNDIIAVLTRTVNGAGLAMA 323
Query: 317 TMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKG 376
TMDIIKL+GG PANFLDVGGG +I AF +I+SD V I VN+FGGIV C IA+G
Sbjct: 324 TMDIIKLNGGSPANFLDVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQG 383
Query: 377 LVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L+N + L P+V RL+GTN+++ ++++ES L + DL AA
Sbjct: 384 LINVVQEMGLRTPIVARLQGTNMEQAHKLINESGLKIFSIEDLQSAA 430
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N + L P+V RL+GTN+++ ++++ES L + DL AA
Sbjct: 381 AQGLINVVQEMGLRTPIVARLQGTNMEQAHKLINESGLKIFSIEDLQSAA 430
>gi|289740029|gb|ADD18762.1| succinyl-CoA synthetase beta subunit [Glossina morsitans morsitans]
Length = 452
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/390 (43%), Positives = 239/390 (61%), Gaps = 33/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A +I L V+KAQ+LAGGRG+GHF NG K GV + ++ + KM+ L+T
Sbjct: 69 AKDIATGLKTNNLVLKAQVLAGGRGVGHFKNGLKGGVRIVHTPEEAETLAGKMVNQLLVT 128
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G KVMVA+ RE Y ++ +R NGPV+I S GG +IE VAA+ P
Sbjct: 129 KQTGPAGRICKKVMVAERKFPRREFYVAVMMERAFNGPVIIASSQGGVNIEEVAAENPEA 188
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ QG+T+ A+ +A + G A +Q L N
Sbjct: 189 IIYEPIDIKQGLTKEQAKKVAQAI---GVGAAHEEKTIQLLEN----------------- 228
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ LF+ DA +EINP E ++DAK FDD+AE+RQK +F
Sbjct: 229 -------------MYKLFVQKDALLIEINPYAEDAMDGFFALDAKFRFDDSAEYRQKELF 275
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ DP+EV+A+K++LN++ +DG IGC+VNGAGLAMATMDIIKL+GG+PANFLDVG
Sbjct: 276 ALRDWTQEDPKEVEAAKFDLNFIALDGTIGCMVNGAGLAMATMDIIKLYGGDPANFLDVG 335
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +++ +AF+II+SD V CILVN+FGGI+ C IA+G++ A K + +P+VVRL+
Sbjct: 336 GGATAQAVKEAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIIAAAKELNMQMPIVVRLQ 395
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASL 425
GTNV E + ++ +S L +I DLDEAA+L
Sbjct: 396 GTNVNEARELIRKSGLRIIPRHDLDEAANL 425
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K + +P+VVRL+GTNV E + ++ +S L +I DLDEAAN +
Sbjct: 374 AEGIIAAAKELNMQMPIVVRLQGTNVNEARELIRKSGLRIIPRHDLDEAANLAV 427
>gi|443896269|dbj|GAC73613.1| succinyl-coa synthetase, beta subunit [Pseudozyma antarctica T-34]
Length = 426
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/379 (44%), Positives = 237/379 (62%), Gaps = 32/379 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
KE VIKAQ+LAGGRG GHFD+G + GVH ++ + KM+G+KLITKQT G
Sbjct: 69 KEIVIKAQVLAGGRGKGHFDSGLQGGVHLIKTPEEARDLAAKMLGNKLITKQTGAGGRLC 128
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N VM+A++ E Y ++ DR PV+I S GG IE+VAA+ P + T PID +
Sbjct: 129 NAVMIAEARPPHHEYYVAVLNDRSTQLPVMIASNQGGMSIEDVAAENPDAIITTPIDFEK 188
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+++ A IA L F G + + A E
Sbjct: 189 GLSKEDALAIAKKLGFTGVKQEEQAAET-------------------------------- 216
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
QKL+ LF DATQ+EINPL E+ + EV+ +DAK+ FD+NA+FRQ ++F + ++ DP
Sbjct: 217 FQKLYQLFDEKDATQVEINPLAESKDGEVLCMDAKLGFDENADFRQADVFELRDTTQEDP 276
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EV+A+KY LN++ +DGNIGCLVNGAGLAMATMD++KL+GG PANFLDVGG + S+ +
Sbjct: 277 DEVEAAKYGLNFIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDVGGTASAASVKK 336
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF ++ + + V+ I VN+FGGIV+C IA+G++ A + +SIPLVVRL+GT+ +E K +
Sbjct: 337 AFELLLNSNQVQGIFVNIFGGIVSCKKIAEGIIQATQELDMSIPLVVRLQGTHEKEAKEL 396
Query: 406 LDESKLPLIFASDLDEAAS 424
+ S L + LDEAA+
Sbjct: 397 IKNSNLKIFAFDGLDEAAA 415
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + +SIPLVVRL+GT+ +E K ++ S L + LDEAA
Sbjct: 365 AEGIIQATQELDMSIPLVVRLQGTHEKEAKELIKNSNLKIFAFDGLDEAA 414
>gi|408390583|gb|EKJ69975.1| hypothetical protein FPSE_09820 [Fusarium pseudograminearum CS3096]
Length = 445
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/403 (43%), Positives = 239/403 (59%), Gaps = 38/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A I + + + VIKAQ+LAGGRG G FDNG K GV + + E+MIGHK
Sbjct: 62 AKEAKEIAEKIGNDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFAEQMIGHK 121
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT G N V + + RE Y I+ DR + PV++ S GG DIE VA T
Sbjct: 122 LVTKQTGAGGRLCNSVYICERKFARREFYLAILMDRQNQCPVIVSSSQGGMDIEAVAKDT 181
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID++ G+T+ A++IA L F A +QKL+ +F
Sbjct: 182 PDAINTNYIDINVGVTDETAREIATKLGFSEQCIEDAKDTIQKLYKIFREK--------- 232
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
D+TQ+EINPL ET + +V+ +DAK FDDNA+FRQK
Sbjct: 233 ------------------------DSTQIEINPLSETSDHQVLCMDAKFGFDDNADFRQK 268
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + ++ DP EV A++ NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 269 EVFEWRDTTQEDPDEVRAAESNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 328
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD+ V I VN+FGGIV C IA GL+ +S L IP++
Sbjct: 329 DVGGGATPAAIKEAFELITSDAKVTAIFVNIFGGIVRCDAIATGLIKTVESLNLKIPIIA 388
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
RL+GTNV++ +++++S L + DL AA KS +LS
Sbjct: 389 RLQGTNVEKAHQLINDSGLKIFSIDDLQTAAE-----KSVQLS 426
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ +S L IP++ RL+GTNV++ +++++S L + DL AA
Sbjct: 370 ATGLIKTVESLNLKIPIIARLQGTNVEKAHQLINDSGLKIFSIDDLQTAA 419
>gi|328854652|gb|EGG03783.1| hypothetical protein MELLADRAFT_89885 [Melampsora larici-populina
98AG31]
Length = 418
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/393 (44%), Positives = 240/393 (61%), Gaps = 38/393 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFD--NGFKSGVHFTNNVQDIPPILEKM 88
+D + A NI+K K VIKAQ+LAGGRG GHF+ NG K GV ++ +M
Sbjct: 52 KDPQEAYNIVKQAG-KPMVIKAQVLAGGRGKGHFEGPNGLKGGVQMVDSPDQARDFAAQM 110
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+G KLITKQT G N VM+A+ + E Y I+ DR NGP ++ S GG +IE V
Sbjct: 111 LGQKLITKQTGAGGRICNAVMLAEKREPSHEYYVAILNDRSLNGPALVASSQGGMNIEEV 170
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
AAK P + T PID H G+T++ ++A L +K +AA ++F+
Sbjct: 171 AAKDPSAILTYPIDFHNGLTQTQGIEVAKKL----GIKDEAAA-----ADIFI------- 214
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
KL+ LF DATQ+EINPL ET + V+ +DAK+ FD+NAE
Sbjct: 215 -------------------KLYKLFKDKDATQIEINPLAETKDGAVLCMDAKLGFDENAE 255
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQ +F + S+ DP EV+A++Y LN + +DGNIGCLVNGAGLAMATMD++KL GG P
Sbjct: 256 FRQAEVFKLRDRSQEDPTEVEAAEYGLNLIKLDGNIGCLVNGAGLAMATMDVLKLAGGNP 315
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG E++ +AF +I+SD VK I VN+FGGI+ C IA+G++ A L I
Sbjct: 316 ANFLDVGGGATAEAVKKAFELITSDKGVKSIFVNIFGGIMRCDVIAEGIIRATNELSLDI 375
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
PL+VRL+GT +E K+++ ++K+ + +LDE
Sbjct: 376 PLIVRLQGTKEKEAKQLIKDAKMKIFAFDELDE 408
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A ++ A L IPL+VRL+GT +E K+++ ++K+ + +LDE
Sbjct: 361 AEGIIRATNELSLDIPLIVRLQGTKEKEAKQLIKDAKMKIFAFDELDE 408
>gi|432858932|ref|XP_004069010.1| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Oryzias latipes]
Length = 398
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/391 (45%), Positives = 238/391 (60%), Gaps = 66/391 (16%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K LN KE V+KAQILAGGRG G FD+G K GVH T + + + KM+G
Sbjct: 65 ASDALDAAKKLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPAVVGDLASKMLGFN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQTPK G+ V T+ +F +IS
Sbjct: 125 LITKQTPKDGVKVK----------TKIEFFLTC--------FSLIS-------------- 152
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
L ID+ +G+ + A +A L F+ L+ +AA +++KL
Sbjct: 153 -LLFLQEAIDIFEGVRDDQALRMAANLGFKESLQRQAADQIKKL---------------- 195
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
++LFL VDATQ+E+NPL ET + +V+ DAKINFDDNAEFRQK
Sbjct: 196 -----------------YDLFLKVDATQVEVNPLGETPQGQVVCFDAKINFDDNAEFRQK 238
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F+ ++++ESDP E++A+K++L Y+GMDGNI C VNGAGLAMAT DII LHGG+PANFL
Sbjct: 239 AVFAMDDMTESDPTEMEAAKWDLKYIGMDGNIACFVNGAGLAMATCDIIDLHGGKPANFL 298
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 299 DLGGGVKERQVYEAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 358
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E K IL ES LP++ A +LD+AA
Sbjct: 359 RLEGTNVHEAKSILSESGLPIMAADNLDDAA 389
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/267 (48%), Positives = 176/267 (65%), Gaps = 48/267 (17%)
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
A ++A L F+ L+ +AA +++KL++LFL VDATQ+E+NPL ET + +V+ DAKINFD
Sbjct: 171 ALRMAANLGFKESLQRQAADQIKKLYDLFLKVDATQVEVNPLGETPQGQVVCFDAKINFD 230
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
DNAEFRQK +F+ ++++ESDP E++A+K++L Y+GMDGNI C VNGAGLAMAT DII LH
Sbjct: 231 DNAEFRQKAVFAMDDMTESDPTEMEAAKWDLKYIGMDGNIACFVNGAGLAMATCDIIDLH 290
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
GG+PANFLD+GGGV E + +AF+++++D V+ ILVN+FGGIVNCA IA G+
Sbjct: 291 GGKPANFLDLGGGVKERQVYEAFKLLTADPKVEAILVNIFGGIVNCAIIANGITK----- 345
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLEG 444
AC+ +L +PLVVRLEG
Sbjct: 346 -------------------------------------------ACRELELKVPLVVRLEG 362
Query: 445 TNVQEGKRILDESKLPLIFASDLDEAA 471
TNV E K IL ES LP++ A +LD+AA
Sbjct: 363 TNVHEAKSILSESGLPIMAADNLDDAA 389
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A + AC+ +L +PLVVRLEGTNV E K IL ES LP++ A +LD+AA
Sbjct: 340 ANGITKACRELELKVPLVVRLEGTNVHEAKSILSESGLPIMAADNLDDAAR 390
>gi|147903260|ref|NP_001087509.1| succinate-CoA ligase, ADP-forming, beta subunit [Xenopus laevis]
gi|51261652|gb|AAH80033.1| MGC82958 protein [Xenopus laevis]
Length = 458
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/391 (44%), Positives = 238/391 (60%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K++ K+ V+KAQ+LAGGRG G F+ G K GV + ++ I +MIG KL T
Sbjct: 78 AYTVAKEIGSKDLVVKAQVLAGGRGKGTFEGGLKGGVKIVYSPEEAKDIASQMIGKKLFT 137
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N V + + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 138 KQTGEKGRICNHVFICERRYPRREYYFAIAMERAFQGPVLIGSSQGGVNIEDVAAENPDA 197
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A +A+ + F ++ +AA N ++
Sbjct: 198 IIKEPIDIIEGIKKEQAVRLAEKMGFPSNIVDEAA-------NCMIN------------- 237
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+NLF+ DAT +EINP+VE V+ +DAKINFD N+ +RQK +F
Sbjct: 238 -------------LYNLFMKYDATMVEINPMVEDASGVVMCMDAKINFDSNSAYRQKEVF 284
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ D R+ A+ +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 285 DLRDWSQEDERDRQAATADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 344
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AFR+I+SD V ILVN+FGGI+ C IA+G++ A K +L IP+VVRL+
Sbjct: 345 GGATVHQVTEAFRLITSDKKVLAILVNIFGGIMRCDVIAQGIIMAVKDLELRIPIVVRLQ 404
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 405 GTRVDDAKALITASGLKILACDDLDEAAKMV 435
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K +L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 383 AQGIIMAVKDLELRIPIVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 436
>gi|299755136|ref|XP_001828454.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130]
gi|298411086|gb|EAU93446.2| succinate-CoA ligase [Coprinopsis cinerea okayama7#130]
Length = 416
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/388 (44%), Positives = 235/388 (60%), Gaps = 32/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K+ + VIKAQ+LAGGRG GHFD G + GVH ++ + KMIG KLIT
Sbjct: 53 AYQVAKNFGTDKLVIKAQVLAGGRGKGHFDTGLQGGVHMVDSAEQAKDFASKMIGSKLIT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VM+A+ E Y ++ DR G V++ S GG +IE VAAK P
Sbjct: 113 KQTGAGGRICNAVMLAERRQPEHEYYVAVLNDRTTQGVVLVASAQGGMNIEEVAAKDPSA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID +G+++ A IA L F+ + A ++ F++
Sbjct: 173 IITTPIDFEKGLSKPEAIAIAQKLGFKDEQTQSEAADI------FIN------------- 213
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+ +F DATQ+EINP+ T + V+ +DAK FDDNAEFRQ+ +F
Sbjct: 214 -------------LYRIFKEKDATQIEINPMALTKDGAVLCMDAKFGFDDNAEFRQQEVF 260
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S ++S+ +P EV+A K NLN++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFLDVG
Sbjct: 261 SLRDISQEEPSEVEAQKANLNFIKLDGSIGCLVNGAGLAMATMDVLALHGGNPANFLDVG 320
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E++ +AF I+ +D VK I +N+FGGI+ C IA+G++ A K L+IPLVVRL+
Sbjct: 321 GGATPETVKKAFEILLADPKVKSIFINIFGGIMRCDYIAEGVIKATKELGLNIPLVVRLK 380
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT E K+++ +S L +I LDEAA
Sbjct: 381 GTKEAEAKQMIKDSGLTIIPFDSLDEAA 408
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L+IPLVVRL+GT E K+++ +S L +I LDEAA
Sbjct: 359 AEGVIKATKELGLNIPLVVRLKGTKEAEAKQMIKDSGLTIIPFDSLDEAA 408
>gi|91082037|ref|XP_970725.1| PREDICTED: similar to AGAP004744-PA [Tribolium castaneum]
Length = 447
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 239/392 (60%), Gaps = 34/392 (8%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
+ A I +DL K+ V+KAQ+LAGGRG GHF NG K GV + ++ I +M+G L
Sbjct: 66 QEARKIAEDLKTKDIVLKAQVLAGGRGKGHFKNGLKGGVRMVYSPEEAEDIAGQMLGQYL 125
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+TKQT + G N VMVA+ +E YF I+ +R GPV+I S GG +IE VAA+ P
Sbjct: 126 VTKQTGEKGRICNAVMVAERKFPRKEFYFAIMMERAFGGPVIIASSQGGINIEEVAAENP 185
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ PID+ +G+++ AQ +A N+ L S +K D L
Sbjct: 186 AAILYEPIDIVKGLSKEQAQKVA--------------------VNVGLGSQKEKTGDML- 224
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
K+++LF DA +EINP E S+DAK FDDNA FRQK+
Sbjct: 225 -------------LKMYDLFCKKDALLIEINPYAEDAGETYFSLDAKFRFDDNAAFRQKD 271
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
+F+ + ++ D +EV A+K++LNY+ +DG+IGCLVNGAGLAMATMDII LHGG PANFLD
Sbjct: 272 LFALRDWTQEDEKEVAAAKFDLNYIALDGSIGCLVNGAGLAMATMDIISLHGGSPANFLD 331
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +++ +AF+II++D V ILVN+FGGI+ C IA+G++ A K L +P++ R
Sbjct: 332 VGGGATAQAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELNLKMPIICR 391
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
L+GTNV + K ++ S L ++ +LDEAA L
Sbjct: 392 LQGTNVDDAKVLIASSGLKILPVDNLDEAARL 423
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L +P++ RL+GTNV + K ++ S L ++ +LDEAA
Sbjct: 372 AEGIIAAAKELNLKMPIICRLQGTNVDDAKVLIASSGLKILPVDNLDEAAR 422
>gi|307178345|gb|EFN67099.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Camponotus floridanus]
Length = 449
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 239/393 (60%), Gaps = 34/393 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + +L K+ V+KAQ+LAGGRG GHF SGV ++ + M+G
Sbjct: 65 ADEAAKLAANLKTKDIVLKAQVLAGGRGKGHFKGTNVSGVKMCETPEEAKSLASHMLGKL 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA
Sbjct: 125 LITKQTGEAGRICNAVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P+ + PID+++GIT+ A+ I + L L ++ I++
Sbjct: 185 PNAIMYEPIDINKGITKEQAERI--------------------ITKLGLDNVKDYISNI- 223
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ L+ +FL DA LE+NPL E ++D K FDDNAEFRQK
Sbjct: 224 -------------ILNLYQMFLKKDALLLEVNPLAEDINGNYFALDCKCRFDDNAEFRQK 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+FS + S+ DP+EV+A+K++LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFL
Sbjct: 271 ELFSLRDWSQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG + ++ +AF+II+SDS V +LVN+FGGI+ C IA+G++ A K L IP+VV
Sbjct: 331 DVGGGASASAVKEAFKIITSDSRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVV 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
RL+GTNV E K ++ + L ++ DLDEAA +
Sbjct: 391 RLQGTNVDEAKALIANAGLKIVPIDDLDEAARV 423
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 372 AEGIIAATKELSLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAA 421
>gi|270007302|gb|EFA03750.1| hypothetical protein TcasGA2_TC013859 [Tribolium castaneum]
Length = 444
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 239/392 (60%), Gaps = 34/392 (8%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
+ A I +DL K+ V+KAQ+LAGGRG GHF NG K GV + ++ I +M+G L
Sbjct: 63 QEARKIAEDLKTKDIVLKAQVLAGGRGKGHFKNGLKGGVRMVYSPEEAEDIAGQMLGQYL 122
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+TKQT + G N VMVA+ +E YF I+ +R GPV+I S GG +IE VAA+ P
Sbjct: 123 VTKQTGEKGRICNAVMVAERKFPRKEFYFAIMMERAFGGPVIIASSQGGINIEEVAAENP 182
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ PID+ +G+++ AQ +A N+ L S +K D L
Sbjct: 183 AAILYEPIDIVKGLSKEQAQKVA--------------------VNVGLGSQKEKTGDML- 221
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
K+++LF DA +EINP E S+DAK FDDNA FRQK+
Sbjct: 222 -------------LKMYDLFCKKDALLIEINPYAEDAGETYFSLDAKFRFDDNAAFRQKD 268
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
+F+ + ++ D +EV A+K++LNY+ +DG+IGCLVNGAGLAMATMDII LHGG PANFLD
Sbjct: 269 LFALRDWTQEDEKEVAAAKFDLNYIALDGSIGCLVNGAGLAMATMDIISLHGGSPANFLD 328
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +++ +AF+II++D V ILVN+FGGI+ C IA+G++ A K L +P++ R
Sbjct: 329 VGGGATAQAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELNLKMPIICR 388
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
L+GTNV + K ++ S L ++ +LDEAA L
Sbjct: 389 LQGTNVDDAKVLIASSGLKILPVDNLDEAARL 420
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L +P++ RL+GTNV + K ++ S L ++ +LDEAA
Sbjct: 369 AEGIIAAAKELNLKMPIICRLQGTNVDDAKVLIASSGLKILPVDNLDEAAR 419
>gi|164608346|gb|ABY62724.1| mitochondrial succinyl-CoA synthetase beta subunit [Blastocystis
sp. ATCC 50177]
gi|164608348|gb|ABY62725.1| mitochondrial succinyl-CoA synthetase beta subunit [Blastocystis
sp. ATCC 50177]
Length = 416
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/382 (46%), Positives = 232/382 (60%), Gaps = 39/382 (10%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
++V+KAQ+LAGGRG GH+++G + GV +++ I +MIGHKLITKQT GIN N
Sbjct: 60 KFVVKAQVLAGGRGKGHWEHGMQGGVKLAKTPEEVYEIANEMIGHKLITKQTGAKGINCN 119
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
KVMV +V I +E Y I+ DR PV+I + GG IE VA K P + +PI V G
Sbjct: 120 KVMVCGAVKILKEFYLSILLDRAMGCPVIIATSQGGMGIEEVAQKCPECLFKVPISVKNG 179
Query: 167 IT-ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
T E L K+A L GDL
Sbjct: 180 PTNEQLV----------------------------------KLAKDLGLEGDLVQDCVDN 205
Query: 226 VQKLWNLFLSVDATQLEINPL----VETDEREVISVDAKINFDDNAEFRQKNIFSQNEVS 281
V+ L+ +F D+T +EINPL TDE+ + +DAKI FD +A FRQK IF+ + S
Sbjct: 206 VKALYQVFDKCDSTMVEINPLGVIETPTDEKVICCLDAKIAFDKDAAFRQKEIFALRDKS 265
Query: 282 ESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEE 341
DPR+V AS +LNYVG+DG+IGC+VNGAGLAMATMD I GG ANFLDVGG +E
Sbjct: 266 REDPRDVRASLADLNYVGLDGDIGCMVNGAGLAMATMDTINYFGGSAANFLDVGGNAKKE 325
Query: 342 SIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQE 401
I +A RI++SD +VK IL+N+FGGI+ C +A+G+++A + KL +PLVVRLEGTNV +
Sbjct: 326 QITEALRILNSDKHVKSILINIFGGIMRCDVVAQGIMDAVREMKLDLPLVVRLEGTNVAK 385
Query: 402 GKRILDESKLPLIFASDLDEAA 423
GK IL S L +I A+DL +AA
Sbjct: 386 GKEILKSSGLNIIPANDLGDAA 407
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +++A + KL +PLVVRLEGTNV +GK IL S L +I A+DL +AA
Sbjct: 358 AQGIMDAVREMKLDLPLVVRLEGTNVAKGKEILKSSGLNIIPANDLGDAA 407
>gi|19075966|ref|NP_588466.1| succinate-CoA ligase beta subunit (predicted) [Schizosaccharomyces
pombe 972h-]
gi|21264033|sp|O94415.1|SUCB_SCHPO RecName: Full=Probable succinyl-CoA ligase [GDP-forming] subunit
beta, mitochondrial; AltName: Full=Succinyl-CoA
synthetase beta chain; Short=SCS-beta; Flags: Precursor
gi|4008575|emb|CAA22492.1| succinate-CoA ligase beta subunit (predicted) [Schizosaccharomyces
pombe]
Length = 433
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 233/395 (58%), Gaps = 35/395 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + +DL + V+KAQ+LAGGRG G FD+G + GV + + E+MIGHKLIT
Sbjct: 53 AEKVARDLKVTDLVVKAQVLAGGRGKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLIT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
+QT G N V V + I +E YF I+ DR + P+++ S GG DIE VAA+ P
Sbjct: 113 RQTGPAGKICNVVYVCERKFIRKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ + + +A+++ D L F K KA + K
Sbjct: 173 IIKRSLPNSPNLDPHIAEELVDKLGFSSSSKPKAVDAIVK-------------------- 212
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+ +F DATQ+EINPL ET + +V+ +DAK+NFDDNAEFR NIF
Sbjct: 213 -------------LYKVFNDCDATQVEINPLAETTDHKVLCMDAKLNFDDNAEFRHSNIF 259
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++S+ DP E A+K LN++ +DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG
Sbjct: 260 VLRDISQEDPDEARAAKVGLNFIKLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 319
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G N E+I +AF +I++D I VN+FGGIV C IAKGL++ + L+IP++ RL+
Sbjct: 320 GNANAEAIREAFSLITNDPKTTAIFVNIFGGIVRCDVIAKGLISVVSALNLNIPIICRLQ 379
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNACK 430
GTN K +++ S L + DLDEAA AC+
Sbjct: 380 GTNQGAAKEVINNSGLRIFSFDDLDEAAK--KACR 412
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ + L+IP++ RL+GTN K +++ S L + DLDEAA
Sbjct: 358 AKGLISVVSALNLNIPIICRLQGTNQGAAKEVINNSGLRIFSFDDLDEAA 407
>gi|46138741|ref|XP_391061.1| SUCB_NEUCR Probable succinyl-CoA ligase [GDP-forming] beta-chain,
mitochondrial precursor (Succinyl-CoA synthetase, beta
chain) (SCS-beta) [Gibberella zeae PH-1]
Length = 445
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/403 (43%), Positives = 238/403 (59%), Gaps = 38/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A I + + + VIKAQ+LAGGRG G FDNG K GV + + E+MIGHK
Sbjct: 62 AKEAKEIAEKIGNDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFAEQMIGHK 121
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+TKQT G N V + + RE Y I+ DR + PV++ S GG DIE VA T
Sbjct: 122 LVTKQTGAGGRLCNSVYICERKFARREFYLAILMDRQNQCPVIVSSSQGGMDIEAVAKDT 181
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID++ G+T+ A++IA L F A +QKL+ +F
Sbjct: 182 PDAINTNYIDINVGVTDETAREIATKLGFSEQCIEDAKDTIQKLYKIFREK--------- 232
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
D+TQ+EINPL ET + +V+ +DAK FDDNA+FRQK
Sbjct: 233 ------------------------DSTQIEINPLSETSDHQVLCMDAKFGFDDNADFRQK 268
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + ++ DP EV A++ NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 269 EVFEWRDTTQEDPDEVRAAESNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 328
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD V I VN+FGGIV C IA GL+ +S L IP++
Sbjct: 329 DVGGGATPAAIKEAFELITSDPKVTAIFVNIFGGIVRCDAIATGLIKTVESLNLKIPIIA 388
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
RL+GTNV++ +++++S L + DL AA KS +LS
Sbjct: 389 RLQGTNVEKAHQLINDSGLKIFSIDDLQTAAE-----KSVQLS 426
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ +S L IP++ RL+GTNV++ +++++S L + DL AA
Sbjct: 370 ATGLIKTVESLNLKIPIIARLQGTNVEKAHQLINDSGLKIFSIDDLQTAA 419
>gi|358338346|dbj|GAA56712.1| succinyl-CoA synthetase beta subunit [Clonorchis sinensis]
Length = 414
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/379 (43%), Positives = 234/379 (61%), Gaps = 32/379 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ V+KAQ+LAGGRG G +D+G K GV V + + ++M+GH++ T QT +TG N
Sbjct: 44 DVVVKAQVLAGGRGKGLWDSGLKGGVKIVFTVNEAVNLAKRMLGHRIYTAQTGETGQVCN 103
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
++V + RE YF IV DR PV+I GG +IE VA P + IP+D+ +G
Sbjct: 104 TLLVCERKYSRREHYFAIVLDREQGCPVMIGCEQGGVNIEEVARDQPEALTKIPVDITKG 163
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+ A +A L F D +L QK AA +
Sbjct: 164 LPPEDALRMAQSLNFTTD------------------ALVQK--------------AAVYI 191
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
++L+NLF+S D T LEINP+ + E++ +D K+NFDDNA FRQK IF + + ++ D R
Sbjct: 192 ERLYNLFVSTDCTLLEINPIAQDIHDEILCMDCKMNFDDNAAFRQKEIFDERDWTQEDER 251
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
+V A+K NLNY+G+DG IGCLVNGAGLAMATMD+I+LHGG PANFLDVGGG + + +A
Sbjct: 252 DVRAAKSNLNYIGLDGTIGCLVNGAGLAMATMDLIQLHGGSPANFLDVGGGASASQVTEA 311
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
FR+I+SD V ILVN+FGGI+ C IA+G+V A + +P+VVRL+GT V++ K I+
Sbjct: 312 FRLITSDPKVHAILVNIFGGIMRCDVIAQGIVAAATELNIKVPIVVRLQGTRVEDAKAII 371
Query: 407 DESKLPLIFASDLDEAASL 425
S++ ++ +LDEAA +
Sbjct: 372 GSSEMKILGCDNLDEAARM 390
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + +P+VVRL+GT V++ K I+ S++ ++ +LDEAA +
Sbjct: 339 AQGIVAAATELNIKVPIVVRLQGTRVEDAKAIIGSSEMKILGCDNLDEAARMAV 392
>gi|320166382|gb|EFW43281.1| succinate-CoA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 474
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/388 (44%), Positives = 240/388 (61%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + +L ++ VIKAQ+LAGGRG G F NG K GV + + E+MIG +L+T
Sbjct: 94 AEQVAAELGTEDIVIKAQVLAGGRGKGTFQNGLKGGVRTIYSPAEARMYAERMIGQRLVT 153
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N+V + + + RE YF I+ DR GP+++ S GG DIE VA + P
Sbjct: 154 KQTGAEGRVCNEVYICERLYARREYYFAILMDRATAGPLLVGSSQGGVDIETVAHENPDA 213
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID+++G++E+ A K A + F
Sbjct: 214 IVKQAIDINKGLSEAEAI---------------------------------KFATLMGFS 240
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
AA + +L+N+F+ D+T +EINP+ E +VI +DAK+NFDDNA FRQK +F
Sbjct: 241 PSCVRDAAENIIRLYNVFIKYDSTMVEINPMAEVSSGKVICMDAKLNFDDNAAFRQKEVF 300
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ + S+ D REV A++ +LNY+G+DG+IGCLVNGAGLAMAT+DIIKLHGG PANFLDVG
Sbjct: 301 ARRDYSQEDEREVRAAQADLNYIGLDGSIGCLVNGAGLAMATLDIIKLHGGNPANFLDVG 360
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF+IISSD V ILVN+FGGI+ C IA+G++ A + L IPL+VRL+
Sbjct: 361 GGATAQQVTEAFKIISSDPKVTAILVNIFGGIMRCDIIAQGIIAAASTLDLRIPLIVRLQ 420
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT V E K ++D+S L ++ ++LDEAA
Sbjct: 421 GTRVNEAKELIDKSGLRIMLLNNLDEAA 448
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 479 SFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
+ L IPL+VRL+GT V E K ++D+S L ++ ++LDEAA +
Sbjct: 408 TLDLRIPLIVRLQGTRVNEAKELIDKSGLRIMLLNNLDEAAKRAV 452
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 431 SFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 471
+ L IPL+VRL+GT V E K ++D+S L ++ ++LDEAA
Sbjct: 408 TLDLRIPLIVRLQGTRVNEAKELIDKSGLRIMLLNNLDEAA 448
>gi|239608459|gb|EEQ85446.1| succinyl-CoA ligase beta-chain [Ajellomyces dermatitidis ER-3]
Length = 451
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/403 (43%), Positives = 239/403 (59%), Gaps = 43/403 (10%)
Query: 31 EDARTATN---ILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E ARTA + K + ++ VIKAQ+LAGGRG G FDNG K GV + + +
Sbjct: 56 EVARTAEEAEVVAKQIGAEDLVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAGQ 115
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIGH+L+TKQT G N V + + RE Y I+ DR PV++ S GG DIE+
Sbjct: 116 MIGHRLVTKQTGAQGRLCNAVYICERKFARREFYLAILMDRQTQAPVIVSSSQGGVDIES 175
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + T +D++ G+T+ +A++IA L F ++ E
Sbjct: 176 VAKETPEAITTTSVDINVGVTDEMARNIAKDLGF-----SEQCVE--------------- 215
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A +QKL+ +F+ DATQ+EINPL ET E EV+++DAK+ FDDNA
Sbjct: 216 -------------EAKDTIQKLYKVFMEKDATQIEINPLCETTEHEVLAMDAKLGFDDNA 262
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
EFRQK IFS + ++ D EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG
Sbjct: 263 EFRQKEIFSWRDTTQEDADEVKAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGN 322
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++I AF +I+SD V I VN+FGGIV C IA+GL+N L
Sbjct: 323 PANFLDVGGGATPQAIRSAFELITSDPKVTAIFVNIFGGIVRCDAIAQGLINVVNEMNLR 382
Query: 388 IPLVVRLEGTNVQEGKRI-------LDESKLPLIFASDLDEAA 423
P+V RL+GTN+ + + ++ES L + DL AA
Sbjct: 383 TPIVARLQGTNMAKAHELKTNSNVNINESGLKIFSMEDLQNAA 425
>gi|331222831|ref|XP_003324089.1| succinyl-CoA synthetase beta subunit [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309303079|gb|EFP79670.1| succinyl-CoA synthetase beta subunit [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 419
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 171/378 (45%), Positives = 233/378 (61%), Gaps = 37/378 (9%)
Query: 46 KEYVIKAQILAGGRGLGHFD--NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
K VIKAQ+LAGGRG GHF+ +G K GV + + ++MIGHKLITKQT G
Sbjct: 67 KPMVIKAQVLAGGRGKGHFEGKDGLKGGVQMVDTPEQALQYAKQMIGHKLITKQTGAAGR 126
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
N VM+A+ + E Y I+ DR NGP ++ S GG +IE VAAK P + T PID
Sbjct: 127 ICNAVMLAEKREPSHEYYVAILNDRSLNGPALVASAQGGMNIEEVAAKDPSAIHTFPIDF 186
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
+G+++ +IA L + D A A ++F++
Sbjct: 187 QKGLSKQEGVEIAKTLGIK-DHSAAA--------DIFIN--------------------- 216
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
L+ LF DATQ+EINPL ET + V+ +DAK+ FD+NAEFRQ+ +F + S+
Sbjct: 217 -----LYRLFKDKDATQIEINPLAETKDGAVLCMDAKLGFDENAEFRQEKVFQLRDRSQE 271
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DP EV+A++Y LN + +DGNIGCLVNGAGLAMATMD++KL+GG PANFLDVGGG E++
Sbjct: 272 DPTEVEAAEYGLNLIKLDGNIGCLVNGAGLAMATMDVLKLNGGNPANFLDVGGGATAEAV 331
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
+AF +I+SD VK I VN+FGGI+ C IA+G++ A L IPL+VRL+GT +E K
Sbjct: 332 KKAFELITSDKGVKSIFVNIFGGIMRCDVIAEGIIKATNELSLDIPLIVRLQGTKEKEAK 391
Query: 404 RILDESKLPLIFASDLDE 421
+++ ESK+ + LDE
Sbjct: 392 KLIKESKMKIFAFDGLDE 409
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A ++ A L IPL+VRL+GT +E K+++ ESK+ + LDE
Sbjct: 362 AEGIIKATNELSLDIPLIVRLQGTKEKEAKKLIKESKMKIFAFDGLDE 409
>gi|17567829|ref|NP_509821.1| Protein SUCA-1 [Caenorhabditis elegans]
gi|1710875|sp|P53588.1|SUCB1_CAEEL RecName: Full=Probable succinyl-CoA ligase [ADP-forming] subunit
beta, mitochondrial; AltName: Full=ATP-specific
succinyl-CoA synthetase subunit beta; AltName:
Full=Succinyl-CoA synthetase beta-A chain;
Short=SCS-betaA; Flags: Precursor
gi|3877283|emb|CAA91981.1| Protein SUCA-1 [Caenorhabditis elegans]
Length = 435
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/397 (44%), Positives = 239/397 (60%), Gaps = 34/397 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+DA TA + K + K+YV+KAQ+LAGGRG G F +G + GV ++ MIG
Sbjct: 49 QDAETAFSEAKRIGGKDYVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIG 108
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
LITKQT G +VMV K + RE YF I DR NGP+VI S GG +IE VAA
Sbjct: 109 ANLITKQTDHRGKKCEEVMVCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAA 168
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P + +PIDV+ GIT+ LA +IA + F D + + A+E+
Sbjct: 169 TNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKDCEQQ-ASEI----------------- 210
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
++KL+ +F DAT +EINP+ E +V +D K+ D NAEFR
Sbjct: 211 ---------------IEKLYQMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSNAEFR 255
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
Q +F + + D E+ A+ NLNY+ +DG IGC+VNGAGLAMATMDIIKLHGGEPAN
Sbjct: 256 QAKLFDLKDKKQEDELEIRAAAANLNYIRLDGTIGCMVNGAGLAMATMDIIKLHGGEPAN 315
Query: 331 FLDVGGGVNEESIIQAFRIISSDSN-VKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
FLDVGGG E + +AF+II++D + V ILVN+FGGI+ C IA+G++ A + L IP
Sbjct: 316 FLDVGGGATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIQAARELDLKIP 375
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+VVRL+GT V++ K ++ S+L ++ +LDEAA +V
Sbjct: 376 IVVRLQGTKVEDAKALIATSQLRILPCDNLDEAAKMV 412
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A + L IP+VVRL+GT V++ K ++ S+L ++ +LDEAA +
Sbjct: 360 AQGIIQAARELDLKIPIVVRLQGTKVEDAKALIATSQLRILPCDNLDEAAKMVV 413
>gi|310794504|gb|EFQ29965.1| succinate-CoA ligase [Glomerella graminicola M1.001]
Length = 447
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/401 (44%), Positives = 239/401 (59%), Gaps = 34/401 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
++ VIKAQ+LAGGRG G FDNG K GV + + E+MIGHKLITKQT G
Sbjct: 77 EDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAEMFAEQMIGHKLITKQTGAGGKLC 136
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N V + + RE Y I+ DR PV++ S GG DIE VA + P + T ID+++
Sbjct: 137 NSVYICERKFARREFYLAILMDRASQAPVIVSSSQGGMDIETVAKENPDAIITTNIDINK 196
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+T+ +A+DIA L F Q I D A
Sbjct: 197 GVTDEIARDIAVKLGFS----------------------EQCIED-----------AKDT 223
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+QKL+ +FL DATQ+EINPL ET + +V+ +DAK FDDNA++RQK+IF+ + ++ D
Sbjct: 224 IQKLYKIFLEKDATQIEINPLSETSDHKVLCMDAKFGFDDNADYRQKDIFALRDTTQEDA 283
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+ G PANFLDVGGG +I +
Sbjct: 284 DEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNKGTPANFLDVGGGATPAAIKE 343
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF +I+SD V I VN+FGGIV C IA+GL+N K L IP++ RL+GTNV+ I
Sbjct: 344 AFELITSDPKVSAIFVNIFGGIVRCDLIAQGLINTSKELNLKIPIIARLQGTNVEAAHEI 403
Query: 406 LDESKLPLIFASDLDEAA-SLVNACKSFKLSIPLVVRLEGT 445
++ S + + DL AA V K K++ + V +E T
Sbjct: 404 INNSSMKIFSIDDLQTAAEKAVQLSKVVKMARDIDVGVEFT 444
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N K L IP++ RL+GTNV+ I++ S + + DL AA
Sbjct: 372 AQGLINTSKELNLKIPIIARLQGTNVEAAHEIINNSSMKIFSIDDLQTAA 421
>gi|336376396|gb|EGO04731.1| hypothetical protein SERLA73DRAFT_173926 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389436|gb|EGO30579.1| hypothetical protein SERLADRAFT_454874 [Serpula lacrymans var.
lacrymans S7.9]
Length = 417
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/402 (42%), Positives = 240/402 (59%), Gaps = 32/402 (7%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDI 81
V + V + A ++ + VIKAQ+LAGGRG G F+ G + GVH+ N+ +
Sbjct: 39 VSTPKSVVAKSPEEAYDVAQGFGNTPLVIKAQVLAGGRGKGKFETGLQGGVHYINSPEQA 98
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+MIG KLITKQT G N VM A+ + E Y ++ DR+ GP++I S G
Sbjct: 99 REYASRMIGSKLITKQTGAGGRICNAVMFAERHESSHEYYVAVLNDRVSQGPILIASSRG 158
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G +IE VA K P V ID QGI + A +IAD + KA ++ ++F+
Sbjct: 159 GMNIEEVAEKDPGAVVVTSIDYEQGINKDDALNIAD------KIGIKAPRAKKQAADIFI 212
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
+ L+ +F DATQ+EINP+ ET + +++ +DAK+
Sbjct: 213 N--------------------------LYKIFKDKDATQIEINPMTETVDGQILCMDAKL 246
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
FDDNAEFRQK+IF ++S+ +P EV+A + NLN++ +DG+IGCLVNGAGLAMATMD++
Sbjct: 247 AFDDNAEFRQKDIFKLRDISQEEPSEVEAQQANLNFIKLDGSIGCLVNGAGLAMATMDVL 306
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
LHGG PANFLDVGGG +++ +AF I+ D VK I +N+FGGI+ C IA+G++ A
Sbjct: 307 SLHGGNPANFLDVGGGATPDTVKKAFEILLGDPKVKSIFINIFGGIMRCDYIAEGVIRAT 366
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
K + IPLVVRL+GT E KR++ ES+L +I LDEAA
Sbjct: 367 KELSVGIPLVVRLKGTKEVEAKRMIQESQLKIIPFDSLDEAA 408
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K + IPLVVRL+GT E KR++ ES+L +I LDEAA+
Sbjct: 359 AEGVIRATKELSVGIPLVVRLKGTKEVEAKRMIQESQLKIIPFDSLDEAAD 409
>gi|380481187|emb|CCF41991.1| succinyl-CoA ligase subunit beta [Colletotrichum higginsianum]
Length = 447
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 171/378 (45%), Positives = 229/378 (60%), Gaps = 33/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
++ VIKAQ+LAGGRG G FDNG K GV + + E+MIGHKLITKQT G
Sbjct: 77 EDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAEMFAEQMIGHKLITKQTGAGGKLC 136
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N V + + RE Y I+ DR PV++ S GG DIE VA + P + T ID+++
Sbjct: 137 NSVYICERKFARREFYLAILMDRASQAPVIVSSSQGGMDIETVAKENPEAIITTNIDINK 196
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+T+ +A+DIA L F Q + D A
Sbjct: 197 GVTDEIARDIAVKLGFS----------------------EQCVED-----------AKDT 223
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+QKL+ +FL DATQ+EINPL ET + +V+ +DAK FDDNA++RQK+IF+ + ++ D
Sbjct: 224 IQKLYQIFLEKDATQIEINPLSETSDHKVLCMDAKFGFDDNADYRQKDIFALRDTTQEDA 283
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+ G PANFLDVGGG +I +
Sbjct: 284 DEVRAAESGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNKGTPANFLDVGGGATPAAIKE 343
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF +I+SD V I VN+FGGIV C IA+GL+N K L IP++ RL+GTNV+ I
Sbjct: 344 AFELITSDPKVSAIFVNIFGGIVRCDLIAQGLINTSKELNLKIPIIARLQGTNVEAAHEI 403
Query: 406 LDESKLPLIFASDLDEAA 423
++ S + + DL AA
Sbjct: 404 INNSGMKIFSIDDLQTAA 421
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N K L IP++ RL+GTNV+ I++ S + + DL AA
Sbjct: 372 AQGLINTSKELNLKIPIIARLQGTNVEAAHEIINNSGMKIFSIDDLQTAA 421
>gi|393907895|gb|EJD74815.1| succinyl-CoA synthetase [Loa loa]
Length = 433
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 170/412 (41%), Positives = 242/412 (58%), Gaps = 42/412 (10%)
Query: 16 VKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFT 75
V P S D++ N + + K+ V+KAQ+L GGRG G+F++G + GV
Sbjct: 40 VAPFGVSRSADEL--------YNEARKIGGKDLVVKAQVLTGGRGKGYFESGLEGGVQLV 91
Query: 76 NNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVV 135
+ ++ M+G K+ TKQT +G ++VM+ K + RE YF I DR GPV
Sbjct: 92 FSPEEAREKASMMLGSKIFTKQTGASGKLCDEVMICKRLFTRREFYFSITMDRHTGGPVA 151
Query: 136 IISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQK 195
I S GG +IE VAAK P + PID+ G+ ++ A
Sbjct: 152 IGSSKGGVNIEEVAAKDPKAIVKCPIDIFDGMKDAEAS---------------------- 189
Query: 196 LWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVI 255
IAD + F+ DLK +AA +KL+NLF+ DAT +EINP+ E ++
Sbjct: 190 -----------SIADRMGFKDDLKIQAANIFKKLYNLFIKYDATLIEINPMAEDINGKLY 238
Query: 256 SVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAM 315
+D K+N D NA +RQ +F+ + + DP E A+K +LNY+ +DGNIGC+VNGAGLAM
Sbjct: 239 CLDCKLNIDSNASYRQAELFAMEDKQQQDPLESRAAKADLNYIRLDGNIGCMVNGAGLAM 298
Query: 316 ATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSN-VKCILVNVFGGIVNCATIA 374
ATMDIIKLHGG+PANFLDVGGG E + +AFRII++D + V ILVN+FGGI+ C IA
Sbjct: 299 ATMDIIKLHGGDPANFLDVGGGATAEQVAEAFRIITADKDKVNAILVNIFGGIMRCDVIA 358
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+G++ A +L +P+VVRL+GT V++ K ++ + L +I DLD+AA +V
Sbjct: 359 QGMITAISELQLKVPVVVRLQGTRVEDAKALIAAANLRMISCDDLDQAAKMV 410
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A +L +P+VVRL+GT V++ K ++ + L +I DLD+AA +
Sbjct: 358 AQGMITAISELQLKVPVVVRLQGTRVEDAKALIAAANLRMISCDDLDQAAKMVV 411
>gi|302899060|ref|XP_003047970.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728902|gb|EEU42257.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 447
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/414 (42%), Positives = 247/414 (59%), Gaps = 34/414 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A + + + ++ VIKAQ+LAGGRG G FDNG K GV + + ++MIG+
Sbjct: 64 AKEAKQVAEQIGTEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFAQQMIGYN 123
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y I+ DR + PV++ S GG DIE VA +
Sbjct: 124 LITKQTGAGGRLCNSVYICERKFARREFYLAILMDRQNQCPVIVSSSQGGMDIETVAKEN 183
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID++ G+T+ +A++IA L F Q I +
Sbjct: 184 PSAINTNYIDINVGVTDEIAREIATKLGFS----------------------EQCIEE-- 219
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
A +QKL+ +F D+TQ+EINPL ET + +V+ +DAK FDDNA+FRQK
Sbjct: 220 ---------AKDTIQKLYQIFNEKDSTQIEINPLSETSDHQVLCMDAKFGFDDNADFRQK 270
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++F + S+ DP EV A++ NLN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 271 DVFEWRDTSQEDPDEVRAAESNLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 330
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +I +AF +I+SD+ V I VN+FGGIV C IA GL+ +S L IP++
Sbjct: 331 DVGGGATPAAIKEAFELITSDAKVTAIFVNIFGGIVRCDAIATGLIKTVESLNLKIPIIA 390
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKSFKLSIPLVVRLEGT 445
RL+GTNV +++++S L + DL AA V K KL+ + V +E T
Sbjct: 391 RLQGTNVDAAHQLINDSGLKIFSIDDLQSAAEKAVQLSKVVKLARDIDVGVEFT 444
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+ +S L IP++ RL+GTNV +++++S L + DL AA
Sbjct: 372 ATGLIKTVESLNLKIPIIARLQGTNVDAAHQLINDSGLKIFSIDDLQSAA 421
>gi|400593192|gb|EJP61187.1| putative succinyl-CoA ligase [Beauveria bassiana ARSEF 2860]
Length = 444
Score = 324 bits (830), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 171/403 (42%), Positives = 236/403 (58%), Gaps = 38/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + + ++ VIKAQ+LAGGRG G FDNG K GV + Q+ ++MIGHK
Sbjct: 61 AEEAKAVANKIGGEDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSAQEAEMFAQQMIGHK 120
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G + V + + RE Y I+ DR PV++ S GG DIE VA +
Sbjct: 121 LITKQTGAGGRLCSAVYICERKFARREFYLAILMDRASQTPVIVSSSQGGMDIETVAKEN 180
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T +D+++G+T+ +A+ IA L F A +QKL+ +F
Sbjct: 181 PEAIITTYVDINKGVTDEMARGIATKLGFSDQCVEDAKETIQKLYTIFREK--------- 231
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
DATQ+EINPL ET + +V+ +DAK FDDNA+FRQK
Sbjct: 232 ------------------------DATQIEINPLSETSDHQVLCMDAKFGFDDNADFRQK 267
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + ++ D EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 268 EVFEMRDPTQEDADEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 327
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG ++I +AF +I+SD V I VN+FGGIV C IA GL+N ++ L IP++
Sbjct: 328 DVGGGATPQAIREAFELITSDPKVSAIFVNIFGGIVRCDHIATGLINTAEALNLKIPIIA 387
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
RL+GT +E +I+++S + + DL AA KS +LS
Sbjct: 388 RLQGTKNEEAHKIINDSGMKIFSIDDLQSAAE-----KSVQLS 425
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N ++ L IP++ RL+GT +E +I+++S + + DL AA
Sbjct: 369 ATGLINTAEALNLKIPIIARLQGTKNEEAHKIINDSGMKIFSIDDLQSAA 418
>gi|114707318|ref|ZP_01440215.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
gi|114537199|gb|EAU40326.1| succinyl-CoA synthetase subunit beta [Fulvimarina pelagi HTCC2506]
Length = 396
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/399 (43%), Positives = 241/399 (60%), Gaps = 36/399 (9%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPI 84
V + DA A + L YV+K+QI AGGRG G F K GV +++D+
Sbjct: 23 VAITDAGEAEKAARMLPGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSIEDVVAN 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
++M+GH L+TKQT ++G VN++ + +I RE Y I+ DR + S GG D
Sbjct: 83 AKEMLGHTLVTKQTGESGKQVNRLYIEDGADIARELYLSILVDRAVGKVAFVASTEGGMD 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VAA+TP + +PID G+TE AD
Sbjct: 143 IETVAAETPEKIVNLPIDPTAGVTE------AD--------------------------- 169
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
A K++D L+ G+ +A T L+ F+ D + LEINPL+ + +DAK++FD
Sbjct: 170 ASKLSDALKLDGEARADGMTLFPTLYKAFMDKDMSLLEINPLIVMTNGRLRVLDAKVSFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
NA FR +I + + +E D +E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+
Sbjct: 230 SNALFRHDDIKALRDETEEDAKEIEASKYDLAYIALDGDIGCMVNGAGLAMATMDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
G EPANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G+V A K
Sbjct: 290 GKEPANFLDVGGGASKEKVTSAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKEV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L +PLVVRLEGTNV +GK+ILD+S L + A DLD+AA
Sbjct: 350 GLKVPLVVRLEGTNVDQGKQILDQSGLDITSADDLDDAA 388
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV +GK+ILD+S L + A DLD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDQGKQILDQSGLDITSADDLDDAAQKIVKA 394
>gi|307200144|gb|EFN80453.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Harpegnathos saltator]
Length = 449
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/390 (43%), Positives = 235/390 (60%), Gaps = 34/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + L K+ V+KAQ+LAGGRG GHF SGV ++ + +M+G LIT
Sbjct: 68 AAKLAAGLQSKDIVLKAQVLAGGRGKGHFKGSSVSGVKMCETPEEAKALAGQMLGKLLIT 127
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA P
Sbjct: 128 KQTGEAGRICNAVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATNPGA 187
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+++GIT+ A+ I + L L ++ I+D
Sbjct: 188 IMYEPIDINKGITKEQAERITN--------------------KLGLENVKDYISDI---- 223
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ L+ +FL DA LE+NPL E ++D K FDDNAEFRQK +F
Sbjct: 224 ----------IMNLYQMFLKKDALLLEVNPLAEDINGNYFALDCKCRFDDNAEFRQKELF 273
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + ++ D +EVDA+K++LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFLDVG
Sbjct: 274 SLRDWTQEDKKEVDAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 333
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + ++ +AF+II+SD V +LVN+FGGI+ C IA+G++ A K L IP+VVRL+
Sbjct: 334 GGASTSAVKEAFKIITSDPRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 393
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASL 425
GTNV E K ++ + L ++ DLDEAA +
Sbjct: 394 GTNVDEAKALIANAGLKIVPIDDLDEAARV 423
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 372 AEGIIAATKELSLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAA 421
>gi|388583013|gb|EIM23316.1| succinate-CoA ligase [Wallemia sebi CBS 633.66]
Length = 390
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 232/386 (60%), Gaps = 32/386 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K + E VIKAQ+LAGGRG GHF NG +SGVH ++ + + KMIG LITKQT +
Sbjct: 26 KKFDKNELVIKAQVLAGGRGKGHFSNGLQSGVHLIDSPEQAQDLASKMIGSNLITKQTGE 85
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G VM+A+ +E Y I+ DR GPV++ S GG IE VA TP + P
Sbjct: 86 AGKLCTAVMLAERRTPKKEYYAAILNDRSSLGPVLVASSEGGMSIEEVARDTPEKIVKTP 145
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID G+++S A DIA L F D D
Sbjct: 146 IDFQNGLSQSEALDIAKKLGFSTD--------------------------------DAIK 173
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+AA Q L+ +F D TQ+EINPL ET++ V+++DAK FD+NAEFRQ+++F +
Sbjct: 174 QAAGIFQNLFKIFKEKDMTQIEINPLAETEDGAVLAMDAKFGFDENAEFRQQDVFKLRDT 233
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ DP+EV+A+++ LN++ +DGNIGCLVNGAGLAMATMD++ GG PANFLDVGG
Sbjct: 234 TQEDPQEVEAAEHGLNFIKLDGNIGCLVNGAGLAMATMDVLTHQGGSPANFLDVGGSATP 293
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
++ +AF ++ ++ +V+ I VNVFGGI+ C IA+G++ A K L +PLVVRL+GT +
Sbjct: 294 AAVKKAFELLLTEKSVRAIYVNVFGGIMRCDMIAEGIIKATKELDLKVPLVVRLQGTKSE 353
Query: 401 EGKRILDESKLPLIFASDLDEAASLV 426
E ++++ +S L + + LDE A L
Sbjct: 354 EARKLIADSGLKIFATTGLDEGARLA 379
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRL+GT +E ++++ +S L + + LDE A +
Sbjct: 327 AEGIIKATKELDLKVPLVVRLQGTKSEEARKLIADSGLKIFATTGLDEGARLAV 380
>gi|332372528|gb|AEE61406.1| unknown [Dendroctonus ponderosae]
Length = 450
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 239/392 (60%), Gaps = 34/392 (8%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
+ A I + LN K+ V+KAQ+LAGGRG G F NG K GV + + I +M+G L
Sbjct: 69 QEARQIAEKLNTKDLVLKAQVLAGGRGKGSFKNGLKGGVRMVYSPDEAEDISGQMLGQYL 128
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+TKQT + G N VMVA+ +E YF ++ +R GPV+I S GG +IE VAA+ P
Sbjct: 129 VTKQTGEKGRICNAVMVAERKFPRKEFYFAVMMERAFAGPVIIASSQGGVNIEEVAAENP 188
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ P+DV +G+T+ A+ +A K E QK +K A+ L
Sbjct: 189 DAILYEPVDVTKGLTKEQAEKVA----------VKVGLESQK----------EKTAEML- 227
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
++++LF+ DA +EINP E + S+DAK FDDNA FRQK+
Sbjct: 228 -------------LRMYDLFVKKDALLIEINPYAEDAGEKYFSLDAKFRFDDNAAFRQKD 274
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
+F+ + ++ D +EV ASK++LNY+ +DGNIGC+VNGAGLAMATMDII LHGG PANFLD
Sbjct: 275 LFALRDWTQEDEKEVAASKFDLNYIALDGNIGCMVNGAGLAMATMDIISLHGGSPANFLD 334
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG ++ +AF+II++D V ILVN+FGGI+ C IA+G++ A K L +P+V R
Sbjct: 335 VGGGATASAVKEAFKIITADPKVHAILVNIFGGIMRCDVIAEGIIAAAKELSLKMPIVCR 394
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
L+GTNV + K ++ S L ++ +LDEAA L
Sbjct: 395 LQGTNVDDAKVLIASSGLKILPVDNLDEAARL 426
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L +P+V RL+GTNV + K ++ S L ++ +LDEAA
Sbjct: 375 AEGIIAAAKELSLKMPIVCRLQGTNVDDAKVLIASSGLKILPVDNLDEAA 424
>gi|383861079|ref|XP_003706014.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Megachile rotundata]
Length = 449
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/390 (43%), Positives = 236/390 (60%), Gaps = 34/390 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + DL K+ V+KAQ+LAGGRG GHF SGV ++ + +M+G LIT
Sbjct: 68 AAKLAADLKTKDIVLKAQVLAGGRGKGHFKGTNISGVKMCETPEEAKKLASQMLGKLLIT 127
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA P
Sbjct: 128 KQTGEAGRICNAVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATNPSA 187
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PI+++ GIT+ A IA L L ++ I+D
Sbjct: 188 IMYEPININTGITKDQADRIA--------------------VKLGLQNVKDYISDI---- 223
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ L+ +FL DA LE+NPL E + ++D K FDDNAE+RQK +F
Sbjct: 224 ----------IMNLYKMFLKKDALLLEVNPLAEDINGKYFALDCKCRFDDNAEYRQKELF 273
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ DP+EV+A+K++LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFLDVG
Sbjct: 274 ALRDWTQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVG 333
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + ++ +AF+II+SD V +LVN+FGGI+ C IA+G++ A K L IP+VVRL+
Sbjct: 334 GGASTSAVKEAFKIITSDPRVHALLVNIFGGIMRCDVIAEGIIAATKELSLKIPVVVRLQ 393
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASL 425
GTNV E K ++ + L ++ DLDEAA +
Sbjct: 394 GTNVDEAKALIANAGLKIVPIDDLDEAARV 423
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 372 AEGIIAATKELSLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAA 421
>gi|308494725|ref|XP_003109551.1| hypothetical protein CRE_07436 [Caenorhabditis remanei]
gi|308245741|gb|EFO89693.1| hypothetical protein CRE_07436 [Caenorhabditis remanei]
Length = 439
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/401 (43%), Positives = 241/401 (60%), Gaps = 38/401 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK--- 87
+D+ TA + K + K+YV+KAQ+LAGGRG G F +G + GV P +++
Sbjct: 49 QDSDTAYKVAKKIGGKDYVVKAQVLAGGRGKGRFSSGLQGGVQIVFTWYFSPDEVQQKAG 108
Query: 88 -MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIE 146
MIG LITKQT G +VMV K + RE YF I DR NGP+VI S GG +IE
Sbjct: 109 MMIGAHLITKQTDHRGKKCEEVMVCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIE 168
Query: 147 NVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQ 206
VAA P + +PIDV+ GIT+ LA +IA + F D + + A+E+
Sbjct: 169 EVAATNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKDCEQQ-ASEI------------- 214
Query: 207 KIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDN 266
++KL+ +F DAT +EINP+ E +V +D K+ D N
Sbjct: 215 -------------------IEKLYKMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSN 255
Query: 267 AEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
AEFRQ +F + + D E+ A+ NLNY+ +DG IGC+VNGAGLAMATMDIIKLHGG
Sbjct: 256 AEFRQTKLFDLKDKKQEDELEIRAAAANLNYIRLDGTIGCMVNGAGLAMATMDIIKLHGG 315
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSN-VKCILVNVFGGIVNCATIAKGLVNACKSFK 385
EPANFLDVGGG E + +AF+II++D + V ILVN+FGGI+ C IA+G++ A +
Sbjct: 316 EPANFLDVGGGATVEQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIKAARELD 375
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
L IP+VVRL+GT V++ K ++ S+L ++ +LDEAA +V
Sbjct: 376 LKIPIVVRLQGTKVEDAKALIATSQLRILPCDNLDEAAKMV 416
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A + L IP+VVRL+GT V++ K ++ S+L ++ +LDEAA +
Sbjct: 364 AQGIIKAARELDLKIPIVVRLQGTKVEDAKALIATSQLRILPCDNLDEAAKMVV 417
>gi|170571332|ref|XP_001891688.1| succinyl-CoA ligase [ADP-forming] beta-chain, mitochondrial,
putative [Brugia malayi]
gi|158603672|gb|EDP39510.1| succinyl-CoA ligase [ADP-forming] beta-chain, mitochondrial,
putative [Brugia malayi]
Length = 434
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 238/390 (61%), Gaps = 34/390 (8%)
Query: 38 NILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQ 97
N + + K+ VIKAQ+L GGRG G+F++G + GV + ++ M+G K+ TKQ
Sbjct: 55 NEARKIGGKDLVIKAQVLTGGRGKGYFESGLEGGVQLVFSPEEAREKASMMLGSKIFTKQ 114
Query: 98 TPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVK 157
T +G ++VMV K + RE YF I DR GPV I S GG +IE VAAK P +
Sbjct: 115 TGASGKLCDEVMVCKRLFTRREFYFSITMDRHTGGPVAIGSSKGGVNIEEVAAKDPSAIV 174
Query: 158 TIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD 217
PI++ +G+ ++ A +AD + F+ D
Sbjct: 175 KCPINIFEGMKDAEAS---------------------------------SVADRMGFKDD 201
Query: 218 LKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQ 277
L+ +AA +KL+NLF+ DAT +EINP+ E ++ +D K+N D NA RQ +F+
Sbjct: 202 LRIQAANIFKKLYNLFIKYDATLIEINPMAEDISGKLYCLDCKLNIDSNASHRQTELFAM 261
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
+ + DP E+ A+K +LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGG+PANFLDVGGG
Sbjct: 262 EDQQQQDPLELRAAKADLNYIRLDGNIGCMVNGAGLAMATMDIIKLHGGDPANFLDVGGG 321
Query: 338 VNEESIIQAFRIISSDSN-VKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEG 396
E + +AFRII++D + V ILVN+FGGI+ C IA+G++NA +L +P+VVRL+G
Sbjct: 322 ATVEQVAEAFRIITADKDKVNAILVNIFGGIMRCDVIAQGMINAVNELQLKVPVVVRLQG 381
Query: 397 TNVQEGKRILDESKLPLIFASDLDEAASLV 426
T V++ K ++ + L +I DLD+AA +V
Sbjct: 382 TRVEDAKALIAAANLRMISCDDLDQAAKMV 411
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++NA +L +P+VVRL+GT V++ K ++ + L +I DLD+AA +
Sbjct: 359 AQGMINAVNELQLKVPVVVRLQGTRVEDAKALIAAANLRMISCDDLDQAAKMVV 412
>gi|346319379|gb|EGX88981.1| succinyl-CoA ligase [Cordyceps militaris CM01]
Length = 444
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/403 (42%), Positives = 233/403 (57%), Gaps = 38/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + + + VIKAQ+LAGGRG G FDNG K GV + Q+ ++MIGHK
Sbjct: 61 AEEAKAVANSIGGDDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSAQEAEMFAQQMIGHK 120
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G + V + + RE Y I+ DR PV++ S GG DIE VA +
Sbjct: 121 LITKQTGAGGRLCSAVYICERKFARREFYLAILMDRASQTPVIVSSSQGGMDIEGVAKEN 180
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T +D++ G+T+ +A+ IA L F A +QKL+ +F
Sbjct: 181 PEAIITTYVDINVGVTDEMARGIATSLGFSEQCIEDAKDTIQKLYTIFREK--------- 231
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
DATQ+EINPL ET + +V+ +DAK FDDNA+FRQK
Sbjct: 232 ------------------------DATQIEINPLSETSDHQVLCMDAKFGFDDNADFRQK 267
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+F + ++ D EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG+PANFL
Sbjct: 268 EVFEMRDPTQEDADEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGQPANFL 327
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG ++I +AF +I+SD V I VN+FGGIV C IA GL+N K+ L IP++
Sbjct: 328 DVGGGATPQAIREAFELITSDPKVTAIFVNIFGGIVRCDHIATGLINTVKALDLKIPIIC 387
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFKLS 435
RL+GTN + +I+ +S L + DL AA KS +LS
Sbjct: 388 RLQGTNNEAAHKIISDSGLKIFSIDDLQNAAE-----KSVQLS 425
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N K+ L IP++ RL+GTN + +I+ +S L + DL AA
Sbjct: 369 ATGLINTVKALDLKIPIICRLQGTNNEAAHKIISDSGLKIFSIDDLQNAA 418
>gi|83775290|dbj|BAE65412.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 460
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 232/408 (56%), Gaps = 50/408 (12%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K L + VIKAQ+LAGGRG G FDNG K GV + + +MIGHK
Sbjct: 60 AEEAEAVAKSLGNDDMVIKAQVLAGGRGKGSFDNGLKGGVRVIYSPTEAKMFAGQMIGHK 119
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT G N V + + RE Y ++ DR PV++ S GG DIE VA +T
Sbjct: 120 LITKQTGAAGRLCNAVYICERKFARREFYLAVLMDRQSQSPVIVASSQGGMDIEAVAKET 179
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T PID+ G+T+ +A KIA L
Sbjct: 180 PEAIITTPIDIKVGVTDEIAG---------------------------------KIATEL 206
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F +A +QKL+ +F+ DATQ+EINPL ET + +V+++DAK+ FDDNA+FRQK
Sbjct: 207 GFSEQCITEAKDTIQKLYKVFMEKDATQIEINPLSETSDHQVMAMDAKLGFDDNADFRQK 266
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCL-----------------VNGAGLAM 315
+FS + ++ D EV A+++ LN++ +DG+IGCL VNGAGLAM
Sbjct: 267 EVFSWRDTTQEDADEVKAAEHGLNFIKLDGDIGCLGKNGNGLLVSSMLITDLVNGAGLAM 326
Query: 316 ATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAK 375
ATMDIIKL+GG PANFLDVGGG +I AF +I+SD V I VN+FGGIV C IA+
Sbjct: 327 ATMDIIKLNGGNPANFLDVGGGATPAAIKSAFELITSDPKVSAIFVNIFGGIVRCDAIAQ 386
Query: 376 GLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
GL+N L P+V RL+GTN+++ ++L+ES L + DL AA
Sbjct: 387 GLINVVNEMGLRTPIVARLQGTNMEQAHKLLNESGLKIFSIEDLQNAA 434
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N L P+V RL+GTN+++ ++L+ES L + DL AA
Sbjct: 385 AQGLINVVNEMGLRTPIVARLQGTNMEQAHKLLNESGLKIFSIEDLQNAA 434
>gi|50287783|ref|XP_446321.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525628|emb|CAG59245.1| unnamed protein product [Candida glabrata]
Length = 419
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/394 (44%), Positives = 231/394 (58%), Gaps = 36/394 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + L + VIKAQ L GGRG GHFD GFKSGVH ++ Q+ + ++M+ HKLIT
Sbjct: 53 AAKAAEQLGTDKLVIKAQALTGGRGKGHFDTGFKSGVHMISSPQEASKLAKEMLQHKLIT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G V+ V +A+ V E Y I+ DR P++I S GG +IE VA K P
Sbjct: 113 KQTGEKGKLVSAVYIAERVETKHEAYLSILMDRATGKPMIICSSEGGMNIEEVAEKNPDA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+K I V +G+ A++IA+ L F
Sbjct: 173 IKKFSITVSEGLKPETAREIAESLG---------------------------------FS 199
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVE---TDEREVISVDAKINFDDNAEFRQK 272
D A V KL+ +F DATQ+EINPL E + +V+ DAK FDDNA F+Q+
Sbjct: 200 ADAIDDAQDAVSKLYKIFSETDATQVEINPLSEIANNKDHKVMCTDAKFGFDDNAFFKQE 259
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
IFS ++++ DP EV A KY LN+V + GNIGCLVNGAGLAMATMD+IKL+GGEPANFL
Sbjct: 260 EIFSWRDLTQEDPDEVSAKKYELNFVKLFGNIGCLVNGAGLAMATMDVIKLNGGEPANFL 319
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GGG E+I + FR+I S+ V I VN+FGGIV C +A GLV A K L IP+V
Sbjct: 320 DCGGGATPETIKEGFRLIMSNDKVDAIFVNIFGGIVRCDFVALGLVEAAKELGLRIPIVA 379
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RL+GTN+ EG++I+ +S L + +LD AA V
Sbjct: 380 RLQGTNLDEGRQIIKDSGLKIYSFDELDPAAKKV 413
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LV A K L IP+V RL+GTN+ EG++I+ +S L + +LD AA
Sbjct: 361 ALGLVEAAKELGLRIPIVARLQGTNLDEGRQIIKDSGLKIYSFDELDPAA 410
>gi|322790101|gb|EFZ15137.1| hypothetical protein SINV_15804 [Solenopsis invicta]
Length = 940
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 174/408 (42%), Positives = 247/408 (60%), Gaps = 43/408 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A N+ K+L K+ V+KAQ+LAGGR G F + SGV V+++ E MIG LIT
Sbjct: 119 AANLAKNLKTKDLVLKAQVLAGGRAKGQFKDSNVSGVVIAEQVKELA---ESMIGKVLIT 175
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VMV + +E Y ++ +R +GPV+I+S GG +IE+VAA P
Sbjct: 176 KQTGSAGKICNSVMVVARMFPRKEYYMAVMLERTFDGPVMIVSKQGGVNIEDVAATNPEA 235
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
V +PIDV +G+T + A IAD L G+ +++IA +
Sbjct: 236 VAYLPIDVSKGLTPAQANSIADKLGLTGN--------------------SKEIASLV--- 272
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+ LF+ DA LEINP E E ++D K FDD+A+FRQK +F
Sbjct: 273 ----------ASNLYELFVEKDALLLEINPFAEDICGEYYALDCKCKFDDSADFRQKELF 322
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++++ DP+EV+A KY+LNY+ + GNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 323 ALKDMTQMDPKEVEAEKYDLNYIALTGNIGCMVNGAGLAMATMDIIKLYGGTPANFLDVG 382
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G E++ + F+I+SSD NV+ ILVN+FGGI+ C IA+G+++A + L IP++VRL+
Sbjct: 383 GTATVETVTEGFKILSSDPNVEAILVNIFGGIMRCDIIAQGIIDATEQLNLKIPIIVRLQ 442
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAAS-------LVNACKSFKLSI 436
GTNV + K+++ ++KL +I D +AA ++N KS L I
Sbjct: 443 GTNVTKAKQLILDAKLKVISVDDFAQAAETSVKLALMMNIAKSLNLDI 490
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/400 (43%), Positives = 237/400 (59%), Gaps = 44/400 (11%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + DL K+ V+KAQ+LAGGRG GHF SGV ++ + +M+G LIT
Sbjct: 549 AAKLAADLKTKDIVLKAQVLAGGRGKGHFKGTNVSGVKMCETPEEAKSLAGQMLGKLLIT 608
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VMV + + +E Y ++ +R GPV+I S GG +IE VAA P
Sbjct: 609 KQTGEGGRICNGVMVTQRMFPRKEYYLAVMMERAFGGPVIIASSQGGVNIEEVAATNPTA 668
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+++GIT+ A+ I V KL + D++
Sbjct: 669 IMYEPIDINKGITKEQAERI-----------------VSKLG-------LDNVKDYI--- 701
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV----------ISVDAKINFDD 265
+ + L+ +FL DA LE+NPL E ++D K FDD
Sbjct: 702 -------SNMIINLYQMFLKKDALLLEVNPLAEDINGNCKFIFLFRLVNFALDCKCRFDD 754
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NAEFRQK +FS + S+ DP+EV+A+K++LNY+ +DGNIGC+VNGAGLAMATMDIIKLHG
Sbjct: 755 NAEFRQKELFSLRDWSQEDPKEVEAAKFDLNYIALDGNIGCMVNGAGLAMATMDIIKLHG 814
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
GEPANFLDVGGG + ++ +AF+II+SD V +LVN+FGGI+ C IA+G++ A K
Sbjct: 815 GEPANFLDVGGGASTSAVKEAFKIITSDPRVHALLVNIFGGIMRCDVIAEGIIAATKELS 874
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
L IP+VVRL+GTNV E K ++ + L ++ DLDEAA +
Sbjct: 875 LKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAARV 914
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L IP+VVRL+GTNV E K ++ + L ++ DLDEAA
Sbjct: 863 AEGIIAATKELSLKIPVVVRLQGTNVDEAKALIANAGLKIVPIDDLDEAA 912
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +++A + L IP++VRL+GTNV + K+++ ++KL +I D +AA
Sbjct: 421 AQGIIDATEQLNLKIPIIVRLQGTNVTKAKQLILDAKLKVISVDDFAQAA 470
>gi|402594111|gb|EJW88037.1| hypothetical protein WUBG_01052 [Wuchereria bancrofti]
Length = 434
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 165/387 (42%), Positives = 240/387 (62%), Gaps = 34/387 (8%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
+ + K+ V+KAQ+L GGRG G+F++G + GV + ++ M+G K+ TKQT
Sbjct: 58 RKIGGKDLVVKAQVLTGGRGKGYFESGLEGGVQLVFSPEEAREKASMMLGSKIFTKQTGA 117
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
+G ++VM+ K + RE YF I DR GPV I S GG +IE VAAK P+ + P
Sbjct: 118 SGKLCDEVMICKRLFTRREFYFSITMDRHTGGPVAIGSSKGGVNIEEVAAKDPNAIVKCP 177
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I++ +G+ ++ A SS+A ++ F+ DL+
Sbjct: 178 INIFEGMKDAEA-----------------------------SSMAHRMG----FKDDLRI 204
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+AA +KL+NLF+ DAT +EINP+ E ++ +D K+N D NA RQ +F+ +
Sbjct: 205 QAADIFKKLYNLFIKYDATLIEINPMAEDINGKLYCLDCKLNVDSNASHRQTELFAMEDQ 264
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+ DP E+ A+K +LNY+ +DGNIGC+VNGAGLAMATMDIIKLHGG+PANFLDVGGG
Sbjct: 265 QQQDPLELRAAKADLNYIRLDGNIGCMVNGAGLAMATMDIIKLHGGDPANFLDVGGGATV 324
Query: 341 ESIIQAFRIISSDSN-VKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNV 399
E + +AFRII++D + V ILVN+FGGI+ C IA+G++NA +L IP+VVRL+GT V
Sbjct: 325 EQVAEAFRIITADKDKVNAILVNIFGGIMRCDVIAQGMINAVSELQLKIPVVVRLQGTRV 384
Query: 400 QEGKRILDESKLPLIFASDLDEAASLV 426
++ K ++ + L +I DLD+AA +V
Sbjct: 385 EDAKALIAAANLRMISCDDLDQAAKMV 411
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++NA +L IP+VVRL+GT V++ K ++ + L +I DLD+AA +
Sbjct: 359 AQGMINAVSELQLKIPVVVRLQGTRVEDAKALIAAANLRMISCDDLDQAAKMVV 412
>gi|346972895|gb|EGY16347.1| succinyl-CoA ligase beta-chain [Verticillium dahliae VdLs.17]
Length = 448
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/378 (43%), Positives = 231/378 (61%), Gaps = 33/378 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
++ VIKAQ+LAGGRG G FDNG K GV + + ++MIGHKL+TKQT G
Sbjct: 78 EDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPHEAEMFADQMIGHKLVTKQTGAGGRLC 137
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N V + + RE Y I+ DR PV++ S GG DIE VA +P + T ID+++
Sbjct: 138 NAVYICERKFARREFYLAILMDRASQTPVIVSSSQGGMDIEAVAKDSPEAINTTYIDINK 197
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+T+ +A+DIA L F Q + D A
Sbjct: 198 GVTDEIARDIAVKLGFS----------------------EQCVED-----------AKDT 224
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+QKL+ +F D+TQ+EINPL ET + +V+ +DAK FDDNA++RQK +F + ++ D
Sbjct: 225 IQKLYKIFTEKDSTQIEINPLSETSDHKVMCMDAKFGFDDNADYRQKEVFEWRDTTQEDA 284
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EV A+K LN++ +DG+IGCLVNGAGLAMATMDIIKL+GG PANFLDVGGG ++I +
Sbjct: 285 DEVRAAKSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNGGAPANFLDVGGGATPQAIKE 344
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF +I+SD+ V I VN+FGGIV C IA GL+N ++ L IP++ RL+GTN++ ++I
Sbjct: 345 AFELITSDAKVSAIFVNIFGGIVRCDHIATGLINTVQALDLKIPIIARLQGTNMEAAQKI 404
Query: 406 LDESKLPLIFASDLDEAA 423
+ +S + + +L AA
Sbjct: 405 IADSGMKIFAIDELQTAA 422
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N ++ L IP++ RL+GTN++ ++I+ +S + + +L AA
Sbjct: 373 ATGLINTVQALDLKIPIIARLQGTNMEAAQKIIADSGMKIFAIDELQTAA 422
>gi|403217928|emb|CCK72420.1| hypothetical protein KNAG_0K00520 [Kazachstania naganishii CBS
8797]
Length = 419
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 238/395 (60%), Gaps = 37/395 (9%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNN-VQDIPPILEKMIGHK 92
+ A I ++ +E V+KAQ L GGRG GHFDNGF+ GV NN V D+ + EKM+GHK
Sbjct: 47 KEAGAIALNIPTREIVLKAQALTGGRGKGHFDNGFQGGVKIINNDVTDVESVAEKMLGHK 106
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQ+ G V+ V V + ++ T+E Y I+ DR P++I S GG +IE +A
Sbjct: 107 LITKQSGPKGKFVSGVYVVEKMDSTKEAYLSILLDRAKKMPLIIASSEGGVNIEEIAETN 166
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K + A+E + LA+++A L
Sbjct: 167 PEAIKKFWV---------------------------GASETE-----LSPELAKQVASSL 194
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET----DEREVISVDAKINFDDNAE 268
F ++A AA + KL+ +F DATQ+EINPL E E + I +DAK FDDNA
Sbjct: 195 GFDQQVEASAADTIAKLYKIFRERDATQIEINPLSEVTTSNGEHKAICMDAKFGFDDNAF 254
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQK +FS ++++ D EV+A KY LN+V ++GNIGCLVNGAGLAMATMD+IKL+GG+P
Sbjct: 255 FRQKEVFSWRDLTQEDSNEVEAKKYELNFVKLNGNIGCLVNGAGLAMATMDVIKLNGGDP 314
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLD GGG E+I + F +I S+ V I VN+FGGIV C +A GLV A K + I
Sbjct: 315 ANFLDCGGGATPETIKKGFELILSNDKVDAIFVNIFGGIVRCDHVALGLVAAAKELNIKI 374
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
P+V RL+GTN+ EG+ I+++S++ + +LD AA
Sbjct: 375 PIVARLQGTNLDEGREIIEKSRVKIYSFDELDPAA 409
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LV A K + IP+V RL+GTN+ EG+ I+++S++ + +LD AA
Sbjct: 360 ALGLVAAAKELNIKIPIVARLQGTNLDEGREIIEKSRVKIYSFDELDPAA 409
>gi|341903476|gb|EGT59411.1| hypothetical protein CAEBREN_20620 [Caenorhabditis brenneri]
Length = 435
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/397 (44%), Positives = 241/397 (60%), Gaps = 34/397 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+DA TA N K + K+YV+KAQ+LAGGRG G F +G + GV ++ MIG
Sbjct: 49 QDAETAFNEAKRIGGKDYVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIG 108
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
LITKQT G +VMV K + RE YF I DR NGP+VI S GG +IE VAA
Sbjct: 109 AHLITKQTDHRGKKCEEVMVCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAA 168
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P + +PIDV+ GIT+ LA +IA + F D + + A+E+
Sbjct: 169 TNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKDCEDQ-ASEI----------------- 210
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
++KL+ +F DAT +EINP+ E +V +D K+ D NAEFR
Sbjct: 211 ---------------IEKLYKMFKGSDATLVEINPMAEDVNGDVYCMDCKLLLDSNAEFR 255
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK +F + + D E+ A+ NLNY+ +DG+IGC+VNGAGLAMATMDIIKLHGGEPAN
Sbjct: 256 QKKLFDLKDKKQEDELEIRAAAANLNYIRLDGSIGCMVNGAGLAMATMDIIKLHGGEPAN 315
Query: 331 FLDVGGGVNEESIIQAFRIISSDSN-VKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
FLDVGGG + + +AF+II++D + V ILVN+FGGI+ C IA+G++ A + L IP
Sbjct: 316 FLDVGGGATVDQVTEAFKIITADKDKVSAILVNIFGGIMRCDVIAQGIIQAARELDLKIP 375
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+VVRL+GT V++ K ++ S+L ++ +LDEAA +V
Sbjct: 376 IVVRLQGTKVEDAKALIANSQLRILPCDNLDEAAKMV 412
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A + L IP+VVRL+GT V++ K ++ S+L ++ +LDEAA +
Sbjct: 360 AQGIIQAARELDLKIPIVVRLQGTKVEDAKALIANSQLRILPCDNLDEAAKMVV 413
>gi|71663174|ref|XP_818583.1| succinyl-CoA ligase [GDP-forming] beta-chain [Trypanosoma cruzi]
gi|70883843|gb|EAN96732.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
cruzi]
Length = 418
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/384 (45%), Positives = 236/384 (61%), Gaps = 35/384 (9%)
Query: 40 LKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTP 99
L + ++ V+K+QILAGGRG+G F++GFK GVH N + +KM+ L+TKQT
Sbjct: 55 LGKIKTEKKVVKSQILAGGRGMGTFEDGFKGGVHVCKNAAEALDCAKKMLNKTLVTKQTG 114
Query: 100 KTGINVNKVMVAKSV-NITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKT 158
G VN + V ++V I RE Y ++ DR P+ I S GG IE +A K P +K
Sbjct: 115 PKGQRVNLLYVTEAVTGIKRELYLALLLDRKTASPMFIGSAEGGMGIEELAQKCPEKIKR 174
Query: 159 IPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDL 218
+ I+V +GI+ A L F G AA +V+ L+N+ S
Sbjct: 175 MRINVQEGISHDNCVAFAKELGFSGRAAENAAEQVKALYNVGKSK--------------- 219
Query: 219 KAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQN 278
D TQ+EINPLVE + +V+ +DAK++FDDNAEFRQK+IFS
Sbjct: 220 ------------------DCTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDIFSLA 261
Query: 279 EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGV 338
+ ++ DP+EV A KY+LNY+ +DGN+GCLVNGAGLAMATMD+I ++GG PANFLDVGG
Sbjct: 262 DDTQIDPKEVLAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDVGGSA 321
Query: 339 NEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK-LSIPLVVRLEGT 397
+E I+ AF+II+ D VK ILVN+FGGI+ C IA+G+V A + K +IP+VVRL G+
Sbjct: 322 TKEQIVAAFQIITGDEKVKGILVNIFGGIMRCDIIAEGIVAASRELKGRNIPVVVRLSGS 381
Query: 398 NVQEGKRILDESKLPLIFASDLDE 421
+EGKRIL ES LPL A + +E
Sbjct: 382 KEEEGKRILQESGLPLHPARNFEE 405
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 470 AASLVNACKSFK-LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A +V A + K +IP+VVRL G+ +EGKRIL ES LPL A + +E
Sbjct: 357 AEGIVAASRELKGRNIPVVVRLSGSKEEEGKRILQESGLPLHPARNFEE 405
>gi|407849036|gb|EKG03900.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
cruzi]
Length = 418
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/384 (45%), Positives = 235/384 (61%), Gaps = 35/384 (9%)
Query: 40 LKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTP 99
L + ++ V+K+QILAGGRG+G F++GFK GVH N + +KM+ L+TKQT
Sbjct: 55 LGKIKTEKKVVKSQILAGGRGMGTFEDGFKGGVHVCKNAAEALDCAKKMLNKTLVTKQTG 114
Query: 100 KTGINVNKVMVAKSV-NITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKT 158
G VN + V ++V I RE Y ++ DR P+ I S GG IE +A K P +K
Sbjct: 115 PKGQRVNLLYVTEAVTGIKRELYLALLLDRKTASPMFIGSAEGGMGIEELAQKCPEKIKR 174
Query: 159 IPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDL 218
+ I+V +GI+ A L F G AA +V+ L+N+ S
Sbjct: 175 MRINVQEGISHDNCVAFAKELGFSGRASENAAEQVKALYNVGKSK--------------- 219
Query: 219 KAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQN 278
D TQ+EINPLVE + +V+ +DAK++FDDNAEFRQK+IFS
Sbjct: 220 ------------------DCTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDIFSLA 261
Query: 279 EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGV 338
+ ++ DP+EV A KY+LNY+ +DGN+GCLVNGAGLAMATMD+I ++GG PANFLDVGG
Sbjct: 262 DDTQIDPKEVLAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDVGGSA 321
Query: 339 NEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK-LSIPLVVRLEGT 397
E I+ AF+II+ D VK ILVN+FGGI+ C IA+G+V A + K +IP+VVRL G+
Sbjct: 322 TREQIVAAFQIITGDEKVKGILVNIFGGIMRCDIIAEGIVAASRELKGRNIPVVVRLSGS 381
Query: 398 NVQEGKRILDESKLPLIFASDLDE 421
+EGKRIL ES LPL A + +E
Sbjct: 382 KEEEGKRILQESGLPLHPARNFEE 405
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 470 AASLVNACKSFK-LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A +V A + K +IP+VVRL G+ +EGKRIL ES LPL A + +E
Sbjct: 357 AEGIVAASRELKGRNIPVVVRLSGSKEEEGKRILQESGLPLHPARNFEE 405
>gi|357620905|gb|EHJ72924.1| hypothetical protein KGM_19304 [Danaus plexippus]
Length = 456
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 240/391 (61%), Gaps = 35/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A ++LN K+ V+KAQ+LAGGRG G F NG K GV + + I+ KM+ L+T
Sbjct: 71 AVKYAQELNTKDIVLKAQVLAGGRGKGSFKNGLKGGVRMVDKPEVAGDIVGKMLKQYLVT 130
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VMV + RE Y I+ +R NGPV+I S GG +IE+VAA+ P
Sbjct: 131 KQTGAAGRICNMVMVTERKFPRREFYVAIMMERSFNGPVIIASSQGGVNIEDVAAENPDA 190
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ GIT+ + + + Q A AA+++ K
Sbjct: 191 ITYEPIDIVTGITDEQISRVINKIGLQE--HAPAASDMMK-------------------- 228
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETD-EREVISVDAKINFDDNAEFRQKNI 274
K+++LF DA +E+NP E + +DAK FDDNA+FRQK +
Sbjct: 229 ------------KMYDLFCKKDALLIEVNPYAEDALTGQFFCLDAKFRFDDNAQFRQKEL 276
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
F ++S+ DP+E++A+K++LNY+ +DG+IGC+VNGAGLAMATMDIIKL+GG+PANFLDV
Sbjct: 277 FKLRDISQEDPKEIEAAKFDLNYIALDGSIGCMVNGAGLAMATMDIIKLYGGDPANFLDV 336
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GGG +++ +AF+II SD V ILVN+FGGI+ C IA+G++NA K+ + IP++VRL
Sbjct: 337 GGGATAQAVSEAFKIILSDPKVSAILVNIFGGIMRCDVIAEGIINAAKNLNIQIPVIVRL 396
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAASL 425
+GT V E ++++ +S L ++ DLDEAA L
Sbjct: 397 QGTKVNEARKLIADSGLRIVPRDDLDEAAQL 427
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++NA K+ + IP++VRL+GT V E ++++ +S L ++ DLDEAA +
Sbjct: 376 AEGIINAAKNLNIQIPVIVRLQGTKVNEARKLIADSGLRIVPRDDLDEAAQLAV 429
>gi|393774267|ref|ZP_10362632.1| succinyl-CoA synthetase subunit beta [Novosphingobium sp. Rr 2-17]
gi|392720123|gb|EIZ77623.1| succinyl-CoA synthetase subunit beta [Novosphingobium sp. Rr 2-17]
Length = 399
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/384 (44%), Positives = 237/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ ++M+G+ L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELPADAKGGVRLAKSIEEVEAFAKEMLGNTLVTIQTGDAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y ++ DR +I+S GG DIE VA TP + TI ID
Sbjct: 103 VNRLYVTDGVDIDKEYYLSMLVDRASGRVAMIVSTEGGMDIEEVAHSTPEKITTITIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A L+ GDL +A QK++
Sbjct: 163 SGFQPHHGRAVAFALKLSGDLAKQA----------------QKVS--------------- 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
Q+L+N F+++D LEINPLVE+ E++ +D K++FD NA +R ++F+ + +E D
Sbjct: 192 --QQLYNAFMALDCDMLEINPLVESKGGELLVLDTKMSFDSNALYRHPDVFALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PAEIEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGKFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II SD VK ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILSDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A+DL +AA + A
Sbjct: 370 ILANSGLPIVPANDLGDAAKKIVA 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVPANDLGDAAKKIV 392
>gi|85709717|ref|ZP_01040782.1| succinyl-CoA synthetase subunit beta [Erythrobacter sp. NAP1]
gi|85688427|gb|EAQ28431.1| succinyl-CoA synthetase subunit beta [Erythrobacter sp. NAP1]
Length = 399
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/384 (45%), Positives = 238/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ ++M+G+ L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELPEDAKGGVRLAKSIEEVEANAKEMLGNTLVTVQTGAEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E YF ++ DR +++S GG DIE VA TP + TI ID
Sbjct: 103 VNRLYVTDGVDIAKEYYFSLLVDRASGQVAMVVSTEGGMDIEAVAHDTPEKITTITIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG + +A L+ GDL + AQK+A
Sbjct: 163 QGFMPHHGRAVAFGLKLSGDLNKQ----------------AQKLA--------------- 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+KL++ F++ D+ LEINPLVET++ +++ +DAK++FD NA FR +I + + +E D
Sbjct: 192 --KKLYDAFMATDSEMLEINPLVETEDGQLLVLDAKMSFDGNALFRHPDIEAMRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P EV+AS+Y+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG E +
Sbjct: 250 PAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D V+ ILVN+FGGI+ C TIA+G+V A K LS+PLVVRLEGTNV++GK
Sbjct: 310 AAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVIAAKEVDLSVPLVVRLEGTNVEKGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A DL +AA + A
Sbjct: 370 ILANSGLPIVPADDLGDAAKKIVA 393
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV++GK IL S LP++ A DL +AA +
Sbjct: 339 AEGIVIAAKEVDLSVPLVVRLEGTNVEKGKEILANSGLPIVPADDLGDAAKKIV 392
>gi|332022240|gb|EGI62555.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Acromyrmex echinatior]
Length = 441
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/408 (41%), Positives = 247/408 (60%), Gaps = 40/408 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K+LN K+ V+KAQ+LAGGR GHF + SGV + ++ + + + MI + L+T
Sbjct: 55 AATLAKNLNTKDLVLKAQVLAGGRAKGHFKSSNVSGVVMCDTIKQVKELADSMIDNVLVT 114
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
+QT TG N VMV + +E Y ++ +R NGPV+I+S GG +IE+VAA P
Sbjct: 115 RQTGPTGKICNSVMVTTRMFPRKEYYMAVMLERTFNGPVIIVSKQGGVNIEDVAATNPEA 174
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +PIDV +G+T A +IAD L G A+ E+ L
Sbjct: 175 IVYVPIDVKKGLTPEQANNIADKLGLVG-----ASKEIASLV------------------ 211
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L++LF+ DA LEINP E E ++D K FDD+A+FRQK +F
Sbjct: 212 ----------ASNLYDLFVEKDALLLEINPFAEDICGEYYALDCKCKFDDSADFRQKELF 261
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ DP+EV+A KYNL+Y+ +DGNIGC+VNGAGLAMATMDIIKL+GG PANFLDVG
Sbjct: 262 ALKDTTQMDPKEVEAEKYNLSYIALDGNIGCMVNGAGLAMATMDIIKLYGGMPANFLDVG 321
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G E++ + F+I+S+D NV+ ILVN+FGGI C IA+G+++A K +++P++ RL+
Sbjct: 322 GTATVETVTEGFKILSTDPNVEAILVNIFGGITKCDIIAQGIIDATKQLNINVPIITRLQ 381
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAAS-------LVNACKSFKLSI 436
G NV + K+++ ++KL +I + +AA ++N KS L I
Sbjct: 382 GNNVDKAKQLILDAKLKVIPVNSFIQAAKTSVKLALMMNIAKSSDLDI 429
>gi|406701507|gb|EKD04649.1| succinate-CoA ligase (ADP-forming) [Trichosporon asahii var. asahii
CBS 8904]
Length = 424
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 229/376 (60%), Gaps = 33/376 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
K V+KAQ+LAGGRG GHFD GF+ GVH ++ + + ++MIGHKLITKQT G
Sbjct: 66 KNVVVKAQVLAGGRGKGHFDTGFQGGVHMADSAEQAKELADQMIGHKLITKQTGAGGRIC 125
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N VM+A+ +E Y ++ DR PV++ S GG +IE+VA TP + T +D
Sbjct: 126 NAVMIAERTPKAKEYYAAVLSDRARGCPVIVASNQGGMNIEDVAHDTPEAIITTNLDFDN 185
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI + A +A+ L F + AA Q+L+ +F
Sbjct: 186 GIDHASAVKLAEQLGFAPAARDNAAEIFQRLYTIFKEK---------------------- 223
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
DATQ+EINPL E + +V+ +DAK FDDNA+FRQK++F+ + S+ DP
Sbjct: 224 -----------DATQIEINPLGEFPDGKVLCMDAKFGFDDNADFRQKDVFALRDKSQEDP 272
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EV A+++ LN++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFLDVGGG E++ +
Sbjct: 273 DEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGNPANFLDVGGGATAEAVKE 332
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF++I S VK I VN+FGGI+ C IA+G++ A +L IP+VVRL+GT E K++
Sbjct: 333 AFKLILSAPQVKSIFVNIFGGIMRCDVIAEGIIKATTELELKIPVVVRLQGTKEAEAKKL 392
Query: 406 LDESKLPLIFASDLDE 421
+ ES L + +LD+
Sbjct: 393 IKESGLKIYANDNLDD 408
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A ++ A +L IP+VVRL+GT E K+++ ES L + +LD+
Sbjct: 361 AEGIIKATTELELKIPVVVRLQGTKEAEAKKLIKESGLKIYANDNLDD 408
>gi|255719276|ref|XP_002555918.1| KLTH0H00880p [Lachancea thermotolerans]
gi|238941884|emb|CAR30056.1| KLTH0H00880p [Lachancea thermotolerans CBS 6340]
Length = 418
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 240/397 (60%), Gaps = 35/397 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
+ + A +I K L V+KAQ L GGRG GHFD G KSGVH + + + ++M+ H
Sbjct: 50 EPQQAYDIAKKLGHDALVVKAQALTGGRGKGHFDTGLKSGVHMIESAEQARDLAKQMLKH 109
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
+LITKQ+ G V+ V V + VN E Y I+ DR ++I S GG +IE VAAK
Sbjct: 110 RLITKQSGAKGKPVSAVYVVERVNAKHEAYLSILMDRQSKKAMIICSSEGGMNIEEVAAK 169
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
P +K + +G+T + A++I+
Sbjct: 170 NPDAIKKFTVTESEGLT---------------------------------AETAKQISKS 196
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPL--VETDEREVISVDAKINFDDNAEF 269
L F + +A AA V KL+ +F DA+Q+EINPL VE + +V+ +DAK FDDNA F
Sbjct: 197 LGFSAEAEADAADAVTKLYKIFKEKDASQIEINPLSEVEGQDTKVMCMDAKFGFDDNASF 256
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ+ ++S ++S+ D EV A K +LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PA
Sbjct: 257 RQEEVYSWRDLSQEDADEVVAKKSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPA 316
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLD GGG E+I AF++I S+ V I VN+FGGIV C +A+GLV+A K+ +S+P
Sbjct: 317 NFLDCGGGATPETIETAFKLILSNEKVDGIFVNIFGGIVRCDFVAQGLVSATKNLAVSVP 376
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+V RL+GTN++EG+RI++ES L + +LD AA V
Sbjct: 377 IVARLQGTNLEEGRRIIEESGLKIYSFDELDPAAQKV 413
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV+A K+ +S+P+V RL+GTN++EG+RI++ES L + +LD AA +
Sbjct: 361 AQGLVSATKNLAVSVPIVARLQGTNLEEGRRIIEESGLKIYSFDELDPAAQKVV 414
>gi|334139645|ref|YP_004532839.1| succinyl-CoA synthetase subunit beta [Novosphingobium sp. PP1Y]
gi|333937663|emb|CCA91021.1| succinyl-CoA synthetase beta subunit [Novosphingobium sp. PP1Y]
Length = 399
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 236/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ ++M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKSIEEVEAFAKEMLGNTLVTVQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E YF ++ DR +I S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYVTDGVDIAKEYYFSMLVDRASGRVAMIASTEGGMDIEEVAHSTPEKITTVTIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G + +A L+ GDL +A QKIA
Sbjct: 163 EGFQPHHGRAVAYALKLDGDLNKQA----------------QKIA--------------- 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++++ F+++D LEINPLVET + +++ +D K++FD NA +R ++F+ + +E D
Sbjct: 192 --KQIYEAFMALDCDMLEINPLVETKDGQLLVLDTKMSFDSNALYRHPDVFALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG E +
Sbjct: 250 PAEIEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGSFPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILKDPNVKGILVNIFGGIMKCDVIAEGIVAAAKEVNLGVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A+DL +AA + A
Sbjct: 370 ILANSGLPIVPANDLGDAAKKIVA 393
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNVQ+GK IL S LP++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLGVPLVVRLEGTNVQQGKDILANSGLPIVPANDLGDAAKKIV 392
>gi|407407943|gb|EKF31549.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
cruzi marinkellei]
gi|407407944|gb|EKF31550.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
cruzi marinkellei]
Length = 418
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 173/384 (45%), Positives = 235/384 (61%), Gaps = 35/384 (9%)
Query: 40 LKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTP 99
L + ++ V+K+QILAGGRG+G F++GFK GVH N + +KM+ L+TKQT
Sbjct: 55 LGKIKTEKKVVKSQILAGGRGMGTFEDGFKGGVHVCKNAAEALDCAKKMLNKTLVTKQTG 114
Query: 100 KTGINVNKVMVAKSV-NITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKT 158
G VN + V ++V I RE Y ++ DR P+ I S GG IE +A K P +K
Sbjct: 115 PKGQKVNLLYVTEAVTGIKRELYLALLLDRKTASPMFIGSAEGGMGIEELAQKCPEKIKR 174
Query: 159 IPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDL 218
+ I+V +GI+ A L F G AA +V+ L+N+ S
Sbjct: 175 MRINVQEGISLDNCVAFAKELGFSGRAAENAAEQVKALYNVGKSK--------------- 219
Query: 219 KAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQN 278
D TQ+EINPLVE + +V+ +DAK++FDDNAEFRQK+IFS
Sbjct: 220 ------------------DCTQVEINPLVELENGDVMCIDAKLSFDDNAEFRQKDIFSLA 261
Query: 279 EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGV 338
+ ++ D +EV A KY+LNY+ +DGN+GCLVNGAGLAMATMD+I ++GG PANFLDVGG
Sbjct: 262 DETQIDSKEVLAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISMNGGRPANFLDVGGSA 321
Query: 339 NEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK-LSIPLVVRLEGT 397
+E I+ AF+II+ D VK ILVN+FGGI+ C IA+G+V A + K +IP+VVRL G+
Sbjct: 322 TKEQIVAAFQIITGDERVKGILVNIFGGIMRCDVIAEGIVAASRELKGRNIPVVVRLSGS 381
Query: 398 NVQEGKRILDESKLPLIFASDLDE 421
+EGKRIL ES LPL A + +E
Sbjct: 382 KEEEGKRILQESGLPLHSARNFEE 405
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 470 AASLVNACKSFK-LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A +V A + K +IP+VVRL G+ +EGKRIL ES LPL A + +E
Sbjct: 357 AEGIVAASRELKGRNIPVVVRLSGSKEEEGKRILQESGLPLHSARNFEE 405
>gi|359399044|ref|ZP_09192052.1| succinyl-CoA synthetase beta subunit [Novosphingobium
pentaromativorans US6-1]
gi|357599589|gb|EHJ61299.1| succinyl-CoA synthetase beta subunit [Novosphingobium
pentaromativorans US6-1]
Length = 399
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 236/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ ++M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKSIEEVEAFAKEMLGNTLVTVQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E YF ++ DR +I S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYVTDGVDIAKEYYFSMLVDRASGRVAMIASTEGGMDIEEVAHSTPEKITTVTIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G + +A L+ GDL +A QKIA
Sbjct: 163 EGFQPHHGRAVAYALKLDGDLNKQA----------------QKIA--------------- 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++++ F+++D LEINPLVET + +++ +D K++FD NA +R ++F+ + +E D
Sbjct: 192 --KQIYEAFMALDCDMLEINPLVETKDGQLLVLDTKMSFDSNALYRHPDVFALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG E +
Sbjct: 250 PAEIEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGSFPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILKDPNVKGILVNIFGGIMKCDVIAEGIVAAAKEVNLGVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A+DL +AA + A
Sbjct: 370 ILANSGLPIVPANDLGDAAKKIVA 393
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNVQ+GK IL S LP++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLGVPLVVRLEGTNVQQGKDILANSGLPIVPANDLGDAAKKIV 392
>gi|401885694|gb|EJT49787.1| succinate-CoA ligase (ADP-forming) [Trichosporon asahii var. asahii
CBS 2479]
Length = 424
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 229/376 (60%), Gaps = 33/376 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
K V+KAQ+LAGGRG GHFD GF+ GVH ++ + + ++MIGHKLI+KQT G
Sbjct: 66 KNVVVKAQVLAGGRGKGHFDTGFQGGVHMADSAEQAKELADQMIGHKLISKQTGAGGRIC 125
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N VM+A+ +E Y ++ DR PV++ S GG +IE+VA TP + T +D
Sbjct: 126 NAVMIAERTPKAKEYYAAVLSDRARGCPVIVASNQGGMNIEDVAHDTPEAIITTNLDFDN 185
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI + A +A+ L F + AA Q+L+ +F
Sbjct: 186 GIDHASAVKLAEQLGFAPAARDNAAEIFQRLYTIFKEK---------------------- 223
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
DATQ+EINPL E + +V+ +DAK FDDNA+FRQK++F+ + S+ DP
Sbjct: 224 -----------DATQIEINPLGEFPDGKVLCMDAKFGFDDNADFRQKDVFALRDKSQEDP 272
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EV A+++ LN++ +DG+IGCLVNGAGLAMATMD++ LHGG PANFLDVGGG E++ +
Sbjct: 273 DEVKAAEFGLNFIKLDGDIGCLVNGAGLAMATMDVLNLHGGNPANFLDVGGGATAEAVKE 332
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF++I S VK I VN+FGGI+ C IA+G++ A +L IP+VVRL+GT E K++
Sbjct: 333 AFKLILSAPQVKSIFVNIFGGIMRCDVIAEGIIKATTELELKIPVVVRLQGTKEAEAKKL 392
Query: 406 LDESKLPLIFASDLDE 421
+ ES L + +LD+
Sbjct: 393 IKESGLKIYANDNLDD 408
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A ++ A +L IP+VVRL+GT E K+++ ES L + +LD+
Sbjct: 361 AEGIIKATTELELKIPVVVRLQGTKEAEAKKLIKESGLKIYANDNLDD 408
>gi|345308075|ref|XP_001510520.2| PREDICTED: succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial-like [Ornithorhynchus anatinus]
Length = 361
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/343 (47%), Positives = 229/343 (66%), Gaps = 40/343 (11%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTG 102
+N KE V+KAQILAGGRG G FD+G + GVH T + + + + ++MIG+ L TKQTPK G
Sbjct: 1 MNAKEIVLKAQILAGGRGKGTFDSGLQGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKDG 60
Query: 103 INVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
+ VNKVM+A++++I+RETYF I+ DR NGPV++ SP GG DIE+VAA TP L+ +D
Sbjct: 61 VKVNKVMIAEALDISRETYFAILMDRACNGPVLVGSPKGGVDIEDVAATTPELIFKEEVD 120
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
+++G+ +S A +A+ L F+ LK +AA +++KL
Sbjct: 121 IYEGLKDSQALRMAENLGFKDALKNQAADQIKKL-------------------------- 154
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
+ LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK IF+ ++ SE
Sbjct: 155 -------YTLFLEIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKEIFAMDDKSE 207
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFLD+GGGV E
Sbjct: 208 NEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPANFLDLGGGVKEAQ 267
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGL----VNAC 381
+ QAF+++++D V L+N+ I+ C K + +N C
Sbjct: 268 VYQAFKLLTADPKVTH-LINL--AIIKCTIGGKWIRSTDINKC 307
>gi|405963331|gb|EKC28914.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Crassostrea gigas]
Length = 452
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/391 (42%), Positives = 236/391 (60%), Gaps = 36/391 (9%)
Query: 27 KVC---LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPP 83
KVC E + A ++L+ + VIKAQ+LAGGRG GHF +G K GV + +
Sbjct: 60 KVCDHTEEVEKAARDLLEQTGSPDVVIKAQVLAGGRGKGHFTSGLKGGVKICFSPDEASD 119
Query: 84 ILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGT 143
I +MIG +LITKQ P G N+VM+++ + RE YF + +R GPV++ S GG
Sbjct: 120 IASQMIGSRLITKQAP-MGRICNQVMLSERLYARREFYFALAMERSFMGPVMVGSSQGGM 178
Query: 144 DIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSS 203
IE+VA + P + P+D+ G+T A +A + F +AA +L++
Sbjct: 179 SIEDVAQENPTAILKEPVDIFAGLTRQQAVSMAGEMGFSPACIDQAADIFLRLYH----- 233
Query: 204 LAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINF 263
++FL DAT +EINP+ E+++ V +D KIN
Sbjct: 234 ---------------------------DIFLKHDATMIEINPMSESNDGTVYCMDCKINI 266
Query: 264 DDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKL 323
DDNA FRQK IF + S+ DPRE A+ +LNY+G+DGNIGCLVNGAGLAMATMDIIKL
Sbjct: 267 DDNASFRQKQIFQLRDWSQEDPREERAAMADLNYIGLDGNIGCLVNGAGLAMATMDIIKL 326
Query: 324 HGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKS 383
HGG PANFLDVGGG + +++AFR+I+SD NV+ ILVN+FGGI+ C IA+G++ A +
Sbjct: 327 HGGSPANFLDVGGGATAKQVMEAFRLITSDPNVQAILVNIFGGIMRCDVIAQGIIAAAEE 386
Query: 384 FKLSIPLVVRLEGTNVQEGKRILDESKLPLI 414
L +P++VRL+GT V++ K ++ S L ++
Sbjct: 387 LHLKVPIMVRLQGTKVEDAKALMAASSLKIM 417
>gi|395788117|ref|ZP_10467693.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
birtlesii LL-WM9]
gi|395409899|gb|EJF76484.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
birtlesii LL-WM9]
Length = 398
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/385 (43%), Positives = 236/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELTPDAKGGVRLAKSVEEVVANVQEMLGKTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRKVGRVAFVVSTEGGMDIETVAEETPEKILTLPIDAT 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + D LE L A + +KL+ +F
Sbjct: 163 QGVTSADCTKLCDALE----LHDSAREDGEKLFPIF------------------------ 194
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ +F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 195 -----YKVFCEKDMSLLEINPLIVMKDGRLRVLDAKVSFDNNALFRHPDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L YV +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKYDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKV 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I A DLD+AA + A
Sbjct: 370 IISDSGLNVISADDLDDAAQKIVAA 394
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKVIISDSGLNVISADDLDDAAQKIVAA 394
>gi|45190396|ref|NP_984650.1| AEL211Wp [Ashbya gossypii ATCC 10895]
gi|44983292|gb|AAS52474.1| AEL211Wp [Ashbya gossypii ATCC 10895]
gi|374107866|gb|AEY96773.1| FAEL211Wp [Ashbya gossypii FDAG1]
Length = 417
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 232/382 (60%), Gaps = 35/382 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
E V+KAQ L GGRG GHF+ G +SGVH ++ ++ + E+M+G++LITKQ+ G V+
Sbjct: 62 ELVVKAQALTGGRGKGHFNTGLQSGVHMISSAEEARELAEQMLGNRLITKQSGAKGKPVS 121
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
V V + V E Y I+ DR P++I S GG +IE VA P +K +DV +G
Sbjct: 122 AVYVVERVKARHEAYLSILMDRQTKKPLIICSSQGGMNIEEVAHSNPDAIKKFYVDVKKG 181
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+ A +A L F + +A AA VQKL+ +F
Sbjct: 182 LDAETAAAVARSLGFSQEAEADAADAVQKLYKIFREK----------------------- 218
Query: 227 QKLWNLFLSVDATQLEINPL--VETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
DATQ+EINPL VE +V+ +DAK FDDNA FRQ+ ++S ++++ D
Sbjct: 219 ----------DATQIEINPLSEVEGQHTKVMCMDAKFGFDDNASFRQQEVYSWRDLTQED 268
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P EV A +LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG E+I
Sbjct: 269 PDEVVAKNSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPANFLDCGGGATPETIE 328
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF++I S++ VK I VN+FGGIV C +A+GLV A K+ + +P+V RL+GTN++EG+R
Sbjct: 329 TAFKLILSNTKVKAIFVNIFGGIVRCDYVAQGLVAATKNLDVKVPIVARLQGTNLEEGRR 388
Query: 405 ILDESKLPLIFASDLDEAASLV 426
I+ ES L + +LD AA V
Sbjct: 389 IIKESGLKIYGFDELDPAAEKV 410
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 451 KRILDESKLPLIFASDLDE-------AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 503
K IL +K+ IF + A LV A K+ + +P+V RL+GTN++EG+RI+
Sbjct: 332 KLILSNTKVKAIFVNIFGGIVRCDYVAQGLVAATKNLDVKVPIVARLQGTNLEEGRRIIK 391
Query: 504 ESKLPLIFASDLDEAA 519
ES L + +LD AA
Sbjct: 392 ESGLKIYGFDELDPAA 407
>gi|87201182|ref|YP_498439.1| succinyl-CoA synthetase subunit beta [Novosphingobium
aromaticivorans DSM 12444]
gi|123488024|sp|Q2G3G8.1|SUCC_NOVAD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|87136863|gb|ABD27605.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
aromaticivorans DSM 12444]
Length = 399
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 235/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ ++M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELPADAKGGVRLAKSIEEVEAFAKEMLGNTLVTVQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y +V DR +I+S GG DIE VA TP + TI ID
Sbjct: 103 VNRLYVTDGVDIDKEYYLSMVVDRATGRVAIIVSTEGGMDIEEVAHSTPEKIATIVIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G F+ + + L+ GDL +AA
Sbjct: 163 EG---------------------------------FMPHHGRAVGFALKLSGDLLKQAAK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+ F+++D + LEINPLV+T + ++ +D K++FD NA +R ++ + + +E D
Sbjct: 190 IAEQLYTAFVALDCSMLEINPLVQTKDGNLLVLDTKMSFDSNALYRHPDVVALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PAEIEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D VK ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A+DL +AA + A
Sbjct: 370 ILANSGLPIVPANDLGDAAKKIVA 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVPANDLGDAAKKIV 392
>gi|406987950|gb|EKE08122.1| hypothetical protein ACD_17C00337G0002 [uncultured bacterium]
Length = 387
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 165/390 (42%), Positives = 241/390 (61%), Gaps = 40/390 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I ++L+ +E V+K Q+ AGGRG GV F + +++ + +++IG K++
Sbjct: 31 AQKIAEELDLQEAVLKIQVHAGGRGKA-------GGVKFAKSRKEMGELAQELIGMKMVN 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
+QT G+ KV+++K ++I +ETY V DR P++I S GG +IE +A KTP
Sbjct: 84 QQTGPDGVIAKKVLISKPIDIKKETYLGAVIDRERGTPLLIASSEGGMEIEEMAEKTPDK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +P F G L++ + L ++ F+ +
Sbjct: 144 ILKMPFG------------------FDGTLRS---------FQLL------RLTKFMGWS 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G+L + A + L F+ +DA+ LEINPLVET + E++++DAK++ DDNA FR +I
Sbjct: 171 GELAKQGALVAKALARCFIDMDASLLEINPLVETLDGEILALDAKLSLDDNALFRHADIA 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + S+ +E A Y+L Y+ M GNIGC+VNGAGLAMATMDII+L+GGEPANFLDVG
Sbjct: 231 SYYDPSQVSIQEAAARGYDLAYIAMQGNIGCMVNGAGLAMATMDIIQLYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +EE + + FRII SDS+VK ILVN+FGGI+NCAT+A G+V ACK + +P++VR+E
Sbjct: 291 GGASEEKVAEGFRIILSDSHVKAILVNIFGGIMNCATLASGVVKACKEQHIQVPIIVRME 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASL 425
GTNVQ+GK I ES L + A D+ +AA L
Sbjct: 351 GTNVQKGKEIFQESHLKIQTAEDIKQAAEL 380
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V ACK + +P++VR+EGTNVQ+GK I ES L + A D+ +AA +
Sbjct: 329 ASGVVKACKEQHIQVPIIVRMEGTNVQKGKEIFQESHLKIQTAEDIKQAAELAV 382
>gi|213408347|ref|XP_002174944.1| succinyl-CoA ligase beta-chain [Schizosaccharomyces japonicus
yFS275]
gi|212002991|gb|EEB08651.1| succinyl-CoA ligase beta-chain [Schizosaccharomyces japonicus
yFS275]
Length = 428
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 171/401 (42%), Positives = 236/401 (58%), Gaps = 38/401 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A + +L + VIKAQ+LAGGRG GHFD G K GV + + ++MI
Sbjct: 42 ARTGDEAEKVAHNLKTDDLVIKAQVLAGGRGKGHFDTGLKGGVRIIYDPIEAKMFADQMI 101
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH+LITKQT G N V V + I +E YF I+ DR + PV++ S GG +IE VA
Sbjct: 102 GHRLITKQTGAAGKPCNMVYVCERKYIRKEYYFAILMDRQNKCPVIVASSQGGVNIEAVA 161
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+ P + + + +A+++ D L KA+A + KL+ +F +
Sbjct: 162 AENPSAILQRLVPNKPTLDTRIAKELVDELGVSPQCKAQAVDTITKLYKVFNDT------ 215
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
DATQ+EINP+ ET ++ V+ +DAK+ FDDNA F
Sbjct: 216 ---------------------------DATQVEINPMAETTDQRVLCMDAKLKFDDNALF 248
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R K++ + + S+ DP E+ AS+ LN++ +DG+IGCLVNGAGLAMATMDIIKLHGGEPA
Sbjct: 249 RHKDLLALRDESQEDPDEIRASRCGLNFIKLDGSIGCLVNGAGLAMATMDIIKLHGGEPA 308
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGG N E+I +AF +I D + I VN+FGGIV C IA+GL++ S KL+IP
Sbjct: 309 NFLDVGGSANAEAIREAFGLIVKDPKITAIFVNIFGGIVRCDVIAQGLISVVSSMKLNIP 368
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACK 430
++ RL+GTN + K ++ S L + +LDEAAS AC+
Sbjct: 369 IIARLQGTNQEAAKEVIANSGLRIFSFDELDEAAS--KACR 407
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A L++ S KL+IP++ RL+GTN + K ++ S L + +LDEAA+
Sbjct: 353 AQGLISVVSSMKLNIPIIARLQGTNQEAAKEVIANSGLRIFSFDELDEAAS 403
>gi|121602774|ref|YP_988362.1| succinyl-CoA synthetase subunit beta [Bartonella bacilliformis
KC583]
gi|421760182|ref|ZP_16197002.1| succinyl-CoA synthetase subunit beta [Bartonella bacilliformis INS]
gi|189046885|sp|A1UQV9.1|SUCC_BARBK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|120614951|gb|ABM45552.1| succinyl-CoA synthetase beta chain [Bartonella bacilliformis KC583]
gi|411176575|gb|EKS46594.1| succinyl-CoA synthetase subunit beta [Bartonella bacilliformis INS]
Length = 398
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 242/384 (63%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G+F D+ K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGNFKELDSDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + NI RE Y ++ DR ++S GG DIE VAA+TP + T+ ID
Sbjct: 103 VNRLYIEDGANIERELYLSLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T++ + D L G+ A + +KL+ +
Sbjct: 163 EGVTDADCVKLCDELNLSGN----AREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ D+ + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMDDGRLRVLDAKVSFDNNALFRHPDILGLRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYIALDGMIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV++GK
Sbjct: 310 HAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
I+++S L +I A+DLD+AA + A
Sbjct: 370 IINDSGLNVISANDLDDAAQKIVA 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+++S L +I A+DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEQGKAIINDSGLNVISANDLDDAAQKIVAA 394
>gi|265982931|ref|ZP_06095666.1| succinyl-CoA ligase subunit beta [Brucella sp. 83/13]
gi|306839765|ref|ZP_07472566.1| succinyl-CoA synthetase, beta subunit [Brucella sp. NF 2653]
gi|306842924|ref|ZP_07475560.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO2]
gi|306843377|ref|ZP_07475978.1| succinyl-CoA synthetase, beta subunit [Brucella inopinata BO1]
gi|264661523|gb|EEZ31784.1| succinyl-CoA ligase subunit beta [Brucella sp. 83/13]
gi|306276068|gb|EFM57768.1| succinyl-CoA synthetase, beta subunit [Brucella inopinata BO1]
gi|306286947|gb|EFM58467.1| succinyl-CoA synthetase, beta subunit [Brucella sp. BO2]
gi|306405120|gb|EFM61398.1| succinyl-CoA synthetase, beta subunit [Brucella sp. NF 2653]
Length = 398
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 239/385 (62%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ ++M+G+ L+TKQT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T+ A +AD L+ +G+ A + KL+ +
Sbjct: 163 KGVTDEDANKLADALKLEGE----AREDGLKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ V +DAK++FD+NA FR +I +++E D
Sbjct: 194 ----LYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|357974654|ref|ZP_09138625.1| succinyl-CoA synthetase subunit beta [Sphingomonas sp. KC8]
Length = 399
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 232/384 (60%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV + + ++ M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLSKTLDEVRANATDMLGNTLVTIQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y ++ DR +I+S GG DIE VA TP ++TI ID
Sbjct: 103 VNRLYITDGADIAKEYYLSMLVDRATGRIAMIVSTEGGMDIEEVAHSTPEKIRTITIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G F + +A L+ +GDL +AA
Sbjct: 163 EG---------------------------------FQPHHGRAVAFALKLKGDLNKQAAK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L++ F++ D LEINPL+ET + +++ +DAK++FD NA +R +I + + +E D
Sbjct: 190 VANQLYDAFIATDMAMLEINPLIETTDGKLLVLDAKVSFDSNALYRHPDILALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P EV+ASKY+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG +E +
Sbjct: 250 PAEVEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF++I SD V+ ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKLILSDPAVEGILVNIFGGIMRCDIIAEGIVAAAKEVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A DL +AA + A
Sbjct: 370 ILSHSGLPIVAADDLGDAAKKIVA 393
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVQQGKDILSHSGLPIVAADDLGDAAKKIV 392
>gi|340726333|ref|XP_003401514.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like, partial [Bombus terrestris]
Length = 455
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 238/391 (60%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I DL K+ V+KAQ+LAGGRG+GHF + SGV + + MIG LIT
Sbjct: 62 AAKIATDLKTKDIVLKAQVLAGGRGMGHFKDTNVSGVVMCETPEQAKTLTNNMIGKLLIT 121
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VMV + +E Y ++ ++ +GPVVI+S GG +IE++AA P
Sbjct: 122 KQTGEAGRICNSVMVTTRMFPRKEYYMAVMLEQSFDGPVVIVSKQGGVNIEDIAATNPEA 181
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ P+++ +G++ I D L +G E +K+ +L + +L
Sbjct: 182 ISYTPVNIMKGLSLEQINQIVDNLGIEG--------EERKITSLIICNL----------- 222
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ LF+ DA LEINP E ++D K +FDD++EFRQK +F
Sbjct: 223 --------------YELFIEKDALLLEINPFALDICGEYFALDCKCSFDDSSEFRQKKLF 268
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ DP EV ASK+NL+Y+ +DGNIGC+VNGAGLAMATMD+IK +GG PANFLDVG
Sbjct: 269 ALQDFTQLDPNEVQASKFNLSYIALDGNIGCMVNGAGLAMATMDLIKYNGGMPANFLDVG 328
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G EE++++AF+II SD V+ I VN+FGGI+ C IAKG++NA K +L+IP+VVRL+
Sbjct: 329 GSATEEAVMEAFKIIISDPKVEAIFVNIFGGIMRCDIIAKGIINASKELQLNIPVVVRLQ 388
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GTNV+E R++ E++L +I D +AA V
Sbjct: 389 GTNVEEAHRLIREAQLKVISVDDFAQAAESV 419
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA K +L+IP+VVRL+GTNV+E R++ E++L +I D +AA
Sbjct: 367 AKGIINASKELQLNIPVVVRLQGTNVEEAHRLIREAQLKVISVDDFAQAA 416
>gi|82700691|ref|YP_415265.1| succinyl-CoA synthetase subunit beta [Brucella melitensis biovar
Abortus 2308]
gi|82616792|emb|CAJ11882.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Succinyl-CoA
synthetase, beta subunit:ATP-citrate lyase/succinyl-CoA
l [Brucella melitensis biovar Abortus 2308]
Length = 376
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 238/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ ++M+G+ L+TKQT + G
Sbjct: 21 YVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQ 80
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 81 VNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPA 140
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T+ A +AD L+ +G A + KL+ +
Sbjct: 141 KGVTDEDANKLADALKLEGG----AREDGLKLFPI------------------------- 171
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ V +DAK++FD+NA FR +I +++E D
Sbjct: 172 ----LYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEED 227
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 228 PKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 287
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 288 AAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 347
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 348 IINESGLNVISADDLDDAAQKIVAA 372
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 317 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 372
>gi|350424048|ref|XP_003493672.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Bombus impatiens]
Length = 470
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 165/391 (42%), Positives = 238/391 (60%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I DL K+ V+KAQ+LAGGRG+GHF + SGV + + MIG LIT
Sbjct: 77 AAKIAADLKTKDIVLKAQVLAGGRGMGHFKDTNVSGVVMCETPEQAKTLTNNMIGKLLIT 136
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N VMV + +E Y ++ ++ +GPVVI+S GG +IE++AA P
Sbjct: 137 KQTGEAGRICNSVMVTTRMFPRKEYYMAVMLEQSFDGPVVIVSKQGGVNIEDIAATNPEA 196
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ P+++ +G++ + D L +G E +K+ +L + +L
Sbjct: 197 ISYTPVNIMKGLSLEQINQVVDNLGIEG--------EERKITSLIICNL----------- 237
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ LF+ DA LEINP E ++D K +FDD++EFRQK +F
Sbjct: 238 --------------YELFIEKDALLLEINPFALDICGEYFALDCKCSFDDSSEFRQKELF 283
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ DP EV ASK+NL+Y+ +DGNIGC+VNGAGLAMATMD+IK +GG PANFLDVG
Sbjct: 284 ALQDFTQLDPNEVQASKFNLSYIALDGNIGCMVNGAGLAMATMDLIKYNGGMPANFLDVG 343
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G EE++++AF+II SD V+ I VN+FGGI+ C IAKG++NA K +L+IP+VVRL+
Sbjct: 344 GSATEEAVMEAFKIIISDPKVEAIFVNIFGGIMRCDIIAKGIINASKELQLNIPVVVRLQ 403
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GTNV+E R++ E++L +I D +AA V
Sbjct: 404 GTNVEEAHRLIREAQLKVISVDDFAQAAESV 434
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA K +L+IP+VVRL+GTNV+E R++ E++L +I D +AA
Sbjct: 382 AKGIINASKELQLNIPVVVRLQGTNVEEAHRLIREAQLKVISVDDFAQAA 431
>gi|427428722|ref|ZP_18918762.1| Succinyl-CoA ligase [ADP-forming] beta chain [Caenispirillum
salinarum AK4]
gi|425881830|gb|EKV30514.1| Succinyl-CoA ligase [ADP-forming] beta chain [Caenispirillum
salinarum AK4]
Length = 399
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 176/405 (43%), Positives = 243/405 (60%), Gaps = 37/405 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMI 89
A A + K L YV+K+QI AGGRG G F + G K GV + ++ ++M+
Sbjct: 28 ADEAITVAKQLPGPVYVVKSQIHAGGRGKGTFKESEAGEKGGVRVVKSPAEVGENAKQML 87
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+T QT G V +V + +I RE Y ++ DR + V+ S GG DIE VA
Sbjct: 88 GKTLVTHQTGPAGKEVKRVYIEAGCDIQRELYLAMLVDRATSRISVMASTEGGMDIEEVA 147
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
AKTP + T ID GI+ ++IA L+ +G +++
Sbjct: 148 AKTPEKIVTQSIDPASGISGFHCRNIAFALKLEG----------------------KQVG 185
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
F + + L+ F+ DA+ LEINPLV T + +VI +D K+NFDDNA +
Sbjct: 186 AFTKM-----------LTALYKCFVDTDASMLEINPLVVTGDGQVIPLDCKMNFDDNALY 234
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R K+I + SE DP E++A++++LNY+ +DG+IGC+VNGAGLAMATMDIIKL+GG PA
Sbjct: 235 RHKDIEEMRDESEEDPSEIEAAQHSLNYIKLDGSIGCMVNGAGLAMATMDIIKLYGGAPA 294
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +E + AF+II SD NV+ ILVN+FGGI+ C IA+G+V A + L++P
Sbjct: 295 NFLDVGGGATKERVTAAFKIILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVP 354
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKSFK 433
LVVRLEGTNV+ GK+I+ ES LP+I A +L D A +V A K K
Sbjct: 355 LVVRLEGTNVELGKKIMSESGLPIIAADNLADAAEKVVKAVKEAK 399
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L++PLVVRLEGTNV+ GK+I+ ES LP+I A +L +AA + A
Sbjct: 339 AEGVVAAAREVSLNVPLVVRLEGTNVELGKKIMSESGLPIIAADNLADAAEKVVKA 394
>gi|17986422|ref|NP_539056.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 1
str. 16M]
gi|23502776|ref|NP_698903.1| succinyl-CoA synthetase subunit beta [Brucella suis 1330]
gi|62290780|ref|YP_222573.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 1 str.
9-941]
gi|148559974|ref|YP_001259750.1| succinyl-CoA synthetase subunit beta [Brucella ovis ATCC 25840]
gi|161619844|ref|YP_001593731.1| succinyl-CoA synthetase subunit beta [Brucella canis ATCC 23365]
gi|163843949|ref|YP_001628353.1| succinyl-CoA synthetase subunit beta [Brucella suis ATCC 23445]
gi|189024995|ref|YP_001935763.1| succinyl-CoA synthetase subunit beta [Brucella abortus S19]
gi|225628126|ref|ZP_03786161.1| succinyl-CoA synthetase, beta subunit [Brucella ceti str. Cudo]
gi|225853364|ref|YP_002733597.1| succinyl-CoA synthetase subunit beta [Brucella melitensis ATCC
23457]
gi|237816288|ref|ZP_04595281.1| succinyl-CoA synthetase, beta subunit [Brucella abortus str. 2308
A]
gi|256263152|ref|ZP_05465684.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 2
str. 63/9]
gi|256370328|ref|YP_003107839.1| succinyl-CoA synthetase subunit beta [Brucella microti CCM 4915]
gi|260546046|ref|ZP_05821786.1| succinyl-CoA synthetase subunit beta [Brucella abortus NCTC 8038]
gi|260562842|ref|ZP_05833328.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
16M]
gi|260567585|ref|ZP_05838055.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 4 str. 40]
gi|260755605|ref|ZP_05867953.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 6 str.
870]
gi|260758830|ref|ZP_05871178.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 4 str.
292]
gi|260760554|ref|ZP_05872897.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 2 str.
86/8/59]
gi|260884631|ref|ZP_05896245.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 9 str. C68]
gi|261214879|ref|ZP_05929160.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 3 str.
Tulya]
gi|261217755|ref|ZP_05932036.1| succinyl-CoA ligase subunit beta [Brucella ceti M13/05/1]
gi|261220982|ref|ZP_05935263.1| succinyl-CoA ligase subunit beta [Brucella ceti B1/94]
gi|261316413|ref|ZP_05955610.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis B2/94]
gi|261321397|ref|ZP_05960594.1| succinyl-CoA ligase subunit beta [Brucella ceti M644/93/1]
gi|261323872|ref|ZP_05963069.1| succinyl-CoA ligase subunit beta [Brucella neotomae 5K33]
gi|261751075|ref|ZP_05994784.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 5 str. 513]
gi|261755637|ref|ZP_05999346.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 3 str. 686]
gi|261758868|ref|ZP_06002577.1| succinyl-CoA ligase subunit beta [Brucella sp. F5/99]
gi|265987484|ref|ZP_06100041.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis M292/94/1]
gi|265991956|ref|ZP_06104513.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993688|ref|ZP_06106245.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 3 str.
Ether]
gi|265996941|ref|ZP_06109498.1| succinyl-CoA ligase subunit beta [Brucella ceti M490/95/1]
gi|294851169|ref|ZP_06791842.1| succinyl-CoA ligase subunit beta [Brucella sp. NVSL 07-0026]
gi|297247167|ref|ZP_06930885.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 5 str.
B3196]
gi|340791515|ref|YP_004756980.1| succinyl-CoA synthetase subunit beta [Brucella pinnipedialis B2/94]
gi|376272353|ref|YP_005150931.1| succinyl-CoA synthetase subunit beta [Brucella abortus A13334]
gi|376275479|ref|YP_005115918.1| succinyl-CoA synthetase subunit beta [Brucella canis HSK A52141]
gi|376281571|ref|YP_005155577.1| succinyl-CoA synthetase subunit beta [Brucella suis VBI22]
gi|384212276|ref|YP_005601360.1| succinyl-CoA synthetase subunit beta [Brucella melitensis M5-90]
gi|384225563|ref|YP_005616727.1| succinyl-CoA synthetase subunit beta [Brucella suis 1330]
gi|384409381|ref|YP_005598002.1| succinyl-CoA synthetase subunit beta [Brucella melitensis M28]
gi|384445919|ref|YP_005604638.1| succinyl-CoA synthetase subunit beta [Brucella melitensis NI]
gi|423168098|ref|ZP_17154801.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI435a]
gi|423169526|ref|ZP_17156201.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI474]
gi|423175484|ref|ZP_17162153.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI486]
gi|423177666|ref|ZP_17164311.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI488]
gi|423178959|ref|ZP_17165600.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI010]
gi|423182090|ref|ZP_17168727.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI016]
gi|423186968|ref|ZP_17173582.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI021]
gi|423190596|ref|ZP_17177204.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI259]
gi|54039643|sp|P66868.1|SUCC_BRUSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|54042231|sp|P66867.1|SUCC_BRUME RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|75496187|sp|Q57AX2.1|SUCC_BRUAB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|189046890|sp|A9M8R2.1|SUCC_BRUC2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|189046891|sp|A5VSQ3.1|SUCC_BRUO2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|189046892|sp|B0CIT0.1|SUCC_BRUSI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|226734927|sp|B2S880.1|SUCC_BRUA1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|254778433|sp|C0RFH1.1|SUCC_BRUMB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|17982016|gb|AAL51320.1| succinyl-CoA synthetase beta chain [Brucella melitensis bv. 1 str.
16M]
gi|23348796|gb|AAN30818.1| succinyl-CoA synthetase, beta subunit [Brucella suis 1330]
gi|62196912|gb|AAX75212.1| SucC, succinyl-CoA synthetase, beta subunit [Brucella abortus bv. 1
str. 9-941]
gi|148371231|gb|ABQ61210.1| succinyl-CoA synthetase, beta subunit [Brucella ovis ATCC 25840]
gi|161336655|gb|ABX62960.1| succinyl-CoA synthetase, beta subunit [Brucella canis ATCC 23365]
gi|163674672|gb|ABY38783.1| succinyl-CoA synthetase, beta subunit [Brucella suis ATCC 23445]
gi|189020567|gb|ACD73289.1| succinyl-CoA synthetase subunit beta [Brucella abortus S19]
gi|225616951|gb|EEH13998.1| succinyl-CoA synthetase, beta subunit [Brucella ceti str. Cudo]
gi|225641729|gb|ACO01643.1| succinyl-CoA synthetase, beta subunit [Brucella melitensis ATCC
23457]
gi|237788355|gb|EEP62570.1| succinyl-CoA synthetase, beta subunit [Brucella abortus str. 2308
A]
gi|256000491|gb|ACU48890.1| succinyl-CoA synthetase subunit beta [Brucella microti CCM 4915]
gi|260096153|gb|EEW80029.1| succinyl-CoA synthetase subunit beta [Brucella abortus NCTC 8038]
gi|260152858|gb|EEW87950.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
16M]
gi|260157103|gb|EEW92183.1| succinyl-CoA synthetase subunit beta [Brucella suis bv. 4 str. 40]
gi|260669148|gb|EEX56088.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 4 str.
292]
gi|260670986|gb|EEX57807.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 2 str.
86/8/59]
gi|260675713|gb|EEX62534.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 6 str.
870]
gi|260874159|gb|EEX81228.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 9 str. C68]
gi|260916486|gb|EEX83347.1| succinyl-CoA synthetase subunit beta [Brucella abortus bv. 3 str.
Tulya]
gi|260919566|gb|EEX86219.1| succinyl-CoA ligase subunit beta [Brucella ceti B1/94]
gi|260922844|gb|EEX89412.1| succinyl-CoA ligase subunit beta [Brucella ceti M13/05/1]
gi|261294087|gb|EEX97583.1| succinyl-CoA ligase subunit beta [Brucella ceti M644/93/1]
gi|261295636|gb|EEX99132.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis B2/94]
gi|261299852|gb|EEY03349.1| succinyl-CoA ligase subunit beta [Brucella neotomae 5K33]
gi|261738852|gb|EEY26848.1| succinyl-CoA ligase subunit beta [Brucella sp. F5/99]
gi|261740828|gb|EEY28754.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 5 str. 513]
gi|261745390|gb|EEY33316.1| succinyl-CoA ligase subunit beta [Brucella suis bv. 3 str. 686]
gi|262551409|gb|EEZ07399.1| succinyl-CoA ligase subunit beta [Brucella ceti M490/95/1]
gi|262764669|gb|EEZ10590.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 3 str.
Ether]
gi|263003022|gb|EEZ15315.1| succinyl-CoA ligase subunit beta [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093057|gb|EEZ17207.1| succinyl-CoA synthetase subunit beta [Brucella melitensis bv. 2
str. 63/9]
gi|264659681|gb|EEZ29942.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis M292/94/1]
gi|294819758|gb|EFG36757.1| succinyl-CoA ligase subunit beta [Brucella sp. NVSL 07-0026]
gi|297174336|gb|EFH33683.1| succinyl-CoA ligase subunit beta [Brucella abortus bv. 5 str.
B3196]
gi|326409928|gb|ADZ66993.1| succinyl-CoA synthetase subunit beta [Brucella melitensis M28]
gi|326539641|gb|ADZ87856.1| succinyl-CoA synthetase, beta subunit [Brucella melitensis M5-90]
gi|340559974|gb|AEK55212.1| succinyl-CoA synthetase, beta subunit [Brucella pinnipedialis
B2/94]
gi|343383743|gb|AEM19235.1| succinyl-CoA synthetase subunit beta [Brucella suis 1330]
gi|349743908|gb|AEQ09451.1| succinyl-CoA synthetase subunit beta [Brucella melitensis NI]
gi|358259170|gb|AEU06905.1| succinyl-CoA synthetase subunit beta [Brucella suis VBI22]
gi|363399959|gb|AEW16929.1| succinyl-CoA synthetase, beta subunit [Brucella abortus A13334]
gi|363404046|gb|AEW14341.1| succinyl-CoA synthetase, beta subunit [Brucella canis HSK A52141]
gi|374535928|gb|EHR07449.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI486]
gi|374539847|gb|EHR11350.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI435a]
gi|374543205|gb|EHR14688.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI474]
gi|374549254|gb|EHR20698.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI488]
gi|374551903|gb|EHR23332.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI016]
gi|374552275|gb|EHR23703.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI010]
gi|374554366|gb|EHR25777.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI259]
gi|374557680|gb|EHR29076.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brucella abortus
bv. 1 str. NI021]
Length = 398
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 238/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ ++M+G+ L+TKQT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T+ A +AD L+ +G A + KL+ +
Sbjct: 163 KGVTDEDANKLADALKLEGG----AREDGLKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ V +DAK++FD+NA FR +I +++E D
Sbjct: 194 ----LYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|327289467|ref|XP_003229446.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Anolis carolinensis]
Length = 450
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 237/396 (59%), Gaps = 36/396 (9%)
Query: 33 ARTATNILK---DLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART K ++ E V+KAQ+LAGGRG G F+ G K GV + ++ + +MI
Sbjct: 60 ARTPGEAFKAAQNIGSNELVVKAQVLAGGRGKGTFEGGLKGGVKIVYSPEEAKEMASQMI 119
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G KL TKQT + G N+V++ + +E YF I +R GPV+I S GG +IE+VA
Sbjct: 120 GKKLFTKQTGERGRICNEVLICERRYPKKEYYFAIALERAFQGPVLIGSAQGGVNIEDVA 179
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+ P + P+D+ +GI A LAQK+
Sbjct: 180 AENPEAIVKEPVDIVEGIQTEQA-----------------------------LRLAQKMG 210
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
F D+ AA + KL+ F+ DA +EINP+VE +VI +DAKIN D N+ F
Sbjct: 211 ----FPADVAEDAAHNMVKLYQFFIKYDALMVEINPMVEDSTGKVICIDAKINLDSNSAF 266
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK++F + S+ D R+ +A+ LNYV +DG+IGCLVNGAGLAMATMDIIKLHGG PA
Sbjct: 267 RQKSVFDLQDWSQEDERDREAANAQLNYVPLDGDIGCLVNGAGLAMATMDIIKLHGGTPA 326
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG + E + +AF++I+SD+ V+ +LVN+FGGI+ C IA+G++ A L +P
Sbjct: 327 NFLDVGGGASPEQVKEAFKLITSDTRVQSVLVNIFGGIMRCDIIAQGIIMAASELDLKVP 386
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
+VVRL+GT ++ K ++ +S L ++ DLD+AA +
Sbjct: 387 IVVRLQGTQMESAKALIAKSGLKILPCDDLDQAAQM 422
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A L +P+VVRL+GT ++ K ++ +S L ++ DLD+AA +
Sbjct: 371 AQGIIMAASELDLKVPIVVRLQGTQMESAKALIAKSGLKILPCDDLDQAAQMAV 424
>gi|363753814|ref|XP_003647123.1| hypothetical protein Ecym_5568 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890759|gb|AET40306.1| hypothetical protein Ecym_5568 [Eremothecium cymbalariae
DBVPG#7215]
Length = 419
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/398 (43%), Positives = 239/398 (60%), Gaps = 37/398 (9%)
Query: 33 ARTATNILKDLNFK--EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
A A + K L + + V+KAQ L GGRG GHFD G +SGVH ++ ++ + EKM+G
Sbjct: 49 AEEAYQVAKGLGAESSDLVVKAQALTGGRGKGHFDTGLQSGVHMISSSEEAKDLAEKMVG 108
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
HKLITKQ+ G V+ V + + VN E Y I+ DR P++I S GG +IE+VA
Sbjct: 109 HKLITKQSGANGKLVSAVYIVERVNAKHEAYLSILMDRQTKKPLIICSSEGGMNIEDVAH 168
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P +K + +G+T+ A ++A L F + +A AA V KL+ +F
Sbjct: 169 NNPDAIKKFYVTPSEGLTKETAAEVAKNLGFSKEAEADAADAVLKLYKIFNEK------- 221
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET--DEREVISVDAKINFDDNAE 268
DATQ+EINPL E + +V+ +DAK FDDNA
Sbjct: 222 --------------------------DATQIEINPLSEVTGQDTKVMCMDAKFGFDDNAS 255
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
FRQ+ ++S ++S+ DP EV A +LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+P
Sbjct: 256 FRQQEVYSWRDLSQEDPDEVIAKNSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDP 315
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLD GGG E+I AF++I S+S V I VN+FGGIV C +A+GLV A K+ +++
Sbjct: 316 ANFLDCGGGATPETIETAFKLILSNSKVDAIFVNIFGGIVRCDYVAQGLVAATKNLDVNV 375
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
P+V RL+GTN++ GKRI+ ES L + +LD AA V
Sbjct: 376 PIVARLQGTNLEMGKRIIKESGLKIYGFDELDPAAEKV 413
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 451 KRILDESKLPLIFASDLDE-------AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 503
K IL SK+ IF + A LV A K+ +++P+V RL+GTN++ GKRI+
Sbjct: 335 KLILSNSKVDAIFVNIFGGIVRCDYVAQGLVAATKNLDVNVPIVARLQGTNLEMGKRIIK 394
Query: 504 ESKLPLIFASDLDEAA 519
ES L + +LD AA
Sbjct: 395 ESGLKIYGFDELDPAA 410
>gi|452752248|ref|ZP_21951991.1| Succinyl-CoA ligase [ADP-forming] beta chain [alpha proteobacterium
JLT2015]
gi|451960324|gb|EMD82737.1| Succinyl-CoA ligase [ADP-forming] beta chain [alpha proteobacterium
JLT2015]
Length = 398
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/399 (43%), Positives = 234/399 (58%), Gaps = 36/399 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMI 89
A A K L YV+K+QI AGGRG G F+ GV +V ++ E+M+
Sbjct: 28 ADEAVEAAKKLPGPVYVVKSQIHAGGRGKGKFEGLGADAAGGVRVVKSVDEVKANAEEML 87
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+T QT G VN++ + +I +E Y ++ DR P ++S GG DIE+VA
Sbjct: 88 GRVLVTHQTGPEGKEVNRLYIEDGADIAKEYYLSLLVDRASGMPAFVVSTEGGMDIEDVA 147
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+TP + TI +D G + + +A
Sbjct: 148 AETPEKILTITVDPATG---------------------------------YQPHHGRAVA 174
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ GD KAA + L+ FL+ DA LE+NPLVET +++ +DAK+ FD NA +
Sbjct: 175 AALKLTGDTAKKAAKLGKTLYEAFLATDAAMLEVNPLVETGSGDLLVLDAKMGFDGNALY 234
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R +I ++ SE P E++A KY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPA
Sbjct: 235 RHPDIKELHDESEEAPAELEAGKYDLAYVKLDGNIGCMVNGAGLAMATMDIIKLNGAEPA 294
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG ++E + AF+II SD V+ ILVN+FGGI+ C IA G+V A K LS+P
Sbjct: 295 NFLDVGGGASKEKVTAAFKIILSDDAVEGILVNIFGGIMRCDIIADGIVAAAKEVNLSVP 354
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
LVVRLEGTNV+EGK+IL +S LP++ A +L +AA + A
Sbjct: 355 LVVRLEGTNVEEGKKILADSGLPIVSADNLGDAAKKIVA 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV+EGK+IL +S LP++ A +L +AA +
Sbjct: 339 ADGIVAAAKEVNLSVPLVVRLEGTNVEEGKKILADSGLPIVSADNLGDAAKKIV 392
>gi|294881825|ref|XP_002769505.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239872986|gb|EER02223.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 368
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/387 (43%), Positives = 233/387 (60%), Gaps = 41/387 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTP 99
+ L + V+KAQ+L GGRG GHF +NGF+ GVH ++ + + E+M+ L+T+QT
Sbjct: 10 RRLGGGDVVVKAQVLGGGRGRGHFKENGFQGGVHIASSPSEARIVAEQMLNKSLVTRQTG 69
Query: 100 KTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTI 159
+G V++ + + I E YF I+ DR GPV+++S GG IE VA + P V I
Sbjct: 70 LSGRTCKGVLLCEKLPIVAEKYFAIMLDRGLGGPVMVMSKHGGMSIEEVAIEHPDAVTKI 129
Query: 160 PIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLK 219
PIDV G+T A++ + L F GD A A
Sbjct: 130 PIDVTTGLTTRQAEEAVEHLGFNGDPSAMAT----------------------------- 160
Query: 220 AKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNE 279
++ L+ F+ D T LE+NPL E ++ ++ DAK+ FDDNA FRQ+ I SQ +
Sbjct: 161 ------LKGLYRTFVGADCTMLEVNPLAELEDGRIMVCDAKLAFDDNAAFRQRTIHSQRD 214
Query: 280 VSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVN 339
V+E DP+EV AS+ LNY+ +DG+IGC+VNGAGLAMATMD++ + GG PANFLD+GG V
Sbjct: 215 VTEVDPKEVAASRCGLNYISLDGSIGCMVNGAGLAMATMDLLSVKGGSPANFLDIGGSVG 274
Query: 340 EESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI---PLVVRLEG 396
E + A II+SDSNVK +L+N+FGGIV C +A+G+V A + +LSI P+VVRL G
Sbjct: 275 VEEVKTALGIINSDSNVKSVLINIFGGIVKCDVVAEGIVRAAQ--ELSIDHKPIVVRLVG 332
Query: 397 TNVQEGKRILDESKLPLIFASDLDEAA 423
TNV+ GK IL ++ L DL+EAA
Sbjct: 333 TNVERGKSILAQAGLDYYAIDDLNEAA 359
>gi|288960089|ref|YP_003450429.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
gi|288912397|dbj|BAI73885.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
Length = 399
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 239/396 (60%), Gaps = 35/396 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF-DN-GFKSGVHFTNNVQDIPPILEKMIGHKL 93
A ++ ++L +V+K+QI AGGRG G F DN G K GV +V+++ +M+ H L
Sbjct: 31 AASVARELGGPVWVVKSQIHAGGRGAGRFQDNPGGKGGVRVVKSVEEVSSNAAEMLNHVL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+TKQT G V ++ V + +I RE Y ++ DR +I S GG +IE VA TP
Sbjct: 91 VTKQTGPAGKEVKRLYVEEGADIKRELYLGLLTDRATGRVTIIASTEGGMEIEEVAHNTP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + ID GI QG +K+A L
Sbjct: 151 EKIVKVAIDPATGI--------------QG-------------------HHTRKVAFALG 177
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
G A AA +Q + F +D +EINPL+ T +++++DAK++FDDNA FR K+
Sbjct: 178 LEGKQVASAAKFIQAAYKAFTELDCAIVEINPLIVTGSGDILALDAKMSFDDNALFRHKD 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
+ + + +E DP E++A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLD
Sbjct: 238 VAALRDEAEEDPAEIEAAKHELNYVKLDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF++I SDS V+ ILVN+FGGI+ C IA+G+V A + KL +PLVVR
Sbjct: 298 VGGGATKERVTAAFKLILSDSAVEGILVNIFGGIMRCDVIAEGVVAAARDVKLHVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
LEGTNV GKRIL +S LP++ A +LD+AA + A
Sbjct: 358 LEGTNVALGKRILADSGLPILSADNLDDAAKKIVAA 393
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + KL +PLVVRLEGTNV GKRIL +S LP++ A +LD+AA + A
Sbjct: 338 AEGVVAAARDVKLHVPLVVRLEGTNVALGKRILADSGLPILSADNLDDAAKKIVAA 393
>gi|145521150|ref|XP_001446430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413908|emb|CAK79033.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/385 (43%), Positives = 238/385 (61%), Gaps = 44/385 (11%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
++K+Q+ AGGRG G +G K GV +++ ++MIG+KL+T QTPK G+ VN V
Sbjct: 63 ILKSQVHAGGRGKGTLSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAV 122
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+V + V+I R+ Y + DR P ++ S +GG +IE VA P+ + +PIDV+ G+T
Sbjct: 123 LVHEGVDIVRQLYLAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLT 182
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ +A + D L+ Q ++ +A V++L N
Sbjct: 183 DQIANKVVDTLQLQ-SVRQQA---VEQLRN------------------------------ 208
Query: 229 LWNLFLSVDATQLEINPLVETDER-EVISVDAKINFDDNAEFRQKNIFSQNEVS----ES 283
L+ +F+S+DATQ+EINP TD + ++ +DAKIN DDNA+FRQK + + S +
Sbjct: 209 LYKMFISLDATQVEINPWQATDPKNQLFCIDAKINVDDNAKFRQKELVELRKTSVASEQV 268
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DP E A LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG N E +
Sbjct: 269 DPHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGANVEQV 328
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
AF I++S V+ IL+N+FGGI+ C IA+G++ A + L PLVVRL GTN Q+G
Sbjct: 329 KTAFEILNSHPRVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPLVVRLTGTNSQQGA 388
Query: 404 RILDE-----SKLPLIFASDLDEAA 423
++LDE +K+ + A+DLD+AA
Sbjct: 389 KMLDEFAKSQTKVSITTATDLDDAA 413
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE-----SKLPLIFASDLDEAA 519
A ++ A + L PLVVRL GTN Q+G ++LDE +K+ + A+DLD+AA
Sbjct: 359 AEGIIKAAQLVDLKTPLVVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAA 413
>gi|226480678|emb|CAX73436.1| succinate-Coenzyme A ligase, ADP-forming, beta subunit [Schistosoma
japonicum]
Length = 434
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 226/379 (59%), Gaps = 35/379 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ V+KAQ+LAGGRG G +D+G K GV +V + + +M+GH++ T QT +G N
Sbjct: 67 DVVLKAQVLAGGRGKGIWDSGLKGGVKIVYSVDEAISVANRMLGHRIFTAQTGDSGQLCN 126
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
++ + RE Y IV DR GPV++ GG +IE++A P + IPID+ +G
Sbjct: 127 TLLACERKYSRREHYLAIVLDRSSGGPVMVGCKQGGVNIEDIARDNPDALIKIPIDIDKG 186
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+ + A +A L F +AA +
Sbjct: 187 LDKKDAVMMAHKLGFSH-----------------------------------SDEAAVYI 211
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
++L+ LF S D T LEINP+ + VI +D K+NFDDNA FRQK IF+Q + S+ D R
Sbjct: 212 ERLYKLFDSTDCTLLEINPISQDINGHVICMDCKMNFDDNAAFRQKEIFAQRDWSQEDER 271
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
+V A+ LNY+G+DGNIGCLVNGAGLAMATMD+I+LHGG PANFLDVGGG + +A
Sbjct: 272 DVKATNAGLNYIGLDGNIGCLVNGAGLAMATMDLIQLHGGNPANFLDVGGGATATQVTEA 331
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
FR+I+SD V ILVN+FGGI+ C IA+G+V A + +P++VRL+GT V++ K I+
Sbjct: 332 FRLITSDPKVNAILVNIFGGIMRCDIIAQGIVAAATELNIKVPIIVRLQGTRVEDAKAII 391
Query: 407 DESKLPLIFASDLDEAASL 425
S + ++ SDLDEAA +
Sbjct: 392 ATSHMKILGCSDLDEAAHM 410
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A + +P++VRL+GT V++ K I+ S + ++ SDLDEAA+
Sbjct: 359 AQGIVAAATELNIKVPIIVRLQGTRVEDAKAIIATSHMKILGCSDLDEAAH 409
>gi|319409452|emb|CBI83101.1| succinyl-CoA synthetase, beta chain [Bartonella schoenbuchensis R1]
Length = 398
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/387 (43%), Positives = 237/387 (61%), Gaps = 37/387 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAQSVEEVVANVKEMLGKTLVTKQTGAEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR V ++S GG DIE VA +TP + T+PI+
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRTVGQVVFVVSTEGGMDIETVAEETPEKILTLPIESA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + D L DL+ A + +KL+ +
Sbjct: 163 KGVTSVDCTKLCDAL----DLRDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV+ GK
Sbjct: 310 SAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKDVGLKVPLVVRLEGTNVERGKE 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACK 430
I+D S L +I A DLD+AA +V A K
Sbjct: 370 IIDNSGLNVISADDLDDAAQKIVTAVK 396
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK I+D S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVKDVGLKVPLVVRLEGTNVERGKEIIDNSGLNVISADDLDDAAQKIVTA 394
>gi|395782149|ref|ZP_10462553.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
rattimassiliensis 15908]
gi|395419088|gb|EJF85389.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
rattimassiliensis 15908]
Length = 398
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/385 (43%), Positives = 240/385 (62%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV ++V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAHSVEEVVANVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + NI RE Y ++ DR ++S GG DIE VA KTP + T+PID
Sbjct: 103 VNRIYIEDGANIERELYLSLLVDRSVGQIAFVVSTEGGMDIEIVAEKTPEKILTLPIDAV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+GIT + + + D LE L+ A + +KL+ +
Sbjct: 163 KGITSADCERLCDALE----LRDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR ++ ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDLLELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PRE++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PREIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGDEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+++S L +I A+DLD+AA + A
Sbjct: 370 IINDSDLNVIPANDLDDAAQKIVAA 394
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+++S L +I A+DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIINDSDLNVIPANDLDDAAQKIVAA 394
>gi|156380885|ref|XP_001631997.1| predicted protein [Nematostella vectensis]
gi|156219047|gb|EDO39934.1| predicted protein [Nematostella vectensis]
Length = 436
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/380 (43%), Positives = 236/380 (62%), Gaps = 33/380 (8%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
+ V+KAQ+LAGGRG G F+ G K GV + + + +MIG KL TKQT + G N
Sbjct: 67 DMVVKAQVLAGGRGKGKFEGGLKGGVRIVFSADEAKEVASRMIGKKLFTKQTGELGRVCN 126
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
+V V + + RE YF + +R + GPV++ S GG DIE+VA +TP + P+D+ G
Sbjct: 127 EVFVCERLYARREYYFALALERKYQGPVLVGSQQGGVDIESVAKETPDAIIKQPVDIISG 186
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+ A+ A + F S + AD++
Sbjct: 187 LKIDEARTFARRMGFS-------------------PSCVDQAADWM-------------- 213
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+++++F+S DA LEINP+ E V+ +D K+ FDDNA +RQ+ +F + S+ DPR
Sbjct: 214 MRMYDIFMSRDAVLLEINPMSEDLLGRVVCMDCKLLFDDNASYRQQEVFDLRDWSQDDPR 273
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
EV+A+K+NLNY+G+DG+IGCLVNGAGLAMATMDII+LHGGEPANFLD+GGG + E + A
Sbjct: 274 EVEAAKHNLNYIGLDGSIGCLVNGAGLAMATMDIIQLHGGEPANFLDIGGGASIEQVEAA 333
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
F+II+ DS V ILVN+FGGI+ C IA+G++ A K LSIP+VVRL+GT V++ K ++
Sbjct: 334 FKIITEDSKVHAILVNIFGGIMRCDIIAEGIIAAAKELNLSIPIVVRLQGTRVEDAKALI 393
Query: 407 DESKLPLIFASDLDEAASLV 426
S L +I DL++AA +V
Sbjct: 394 AASGLRIIACDDLEDAAEMV 413
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 430 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 474
K LSIP+VVRL+GT V++ K ++ S L +I DL++AA +V
Sbjct: 369 KELNLSIPIVVRLQGTRVEDAKALIAASGLRIIACDDLEDAAEMV 413
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
K LSIP+VVRL+GT V++ K ++ S L +I DL++AA +
Sbjct: 369 KELNLSIPIVVRLQGTRVEDAKALIAASGLRIIACDDLEDAAEMVV 414
>gi|239833053|ref|ZP_04681382.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum intermedium LMG
3301]
gi|239825320|gb|EEQ96888.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum intermedium LMG
3301]
Length = 432
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 237/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ ++M+G+ L+TKQT G
Sbjct: 77 YVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQ 136
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 137 VNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPA 196
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T+ A +AD L+ +G +A + KL+ +
Sbjct: 197 KGVTDEDANKLADALKLEG----QAREDGVKLFPI------------------------- 227
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + V +DAK++FD NA FR +I ++SE D
Sbjct: 228 ----LYKAFTEKDMSLLEINPLIVMTDGRVRVLDAKVSFDGNALFRHPDIQELRDLSEED 283
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 284 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 343
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 344 AAFKIITADPAVQGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 403
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 404 IINESGLNVISADDLDDAAQKIVAA 428
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 373 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 428
>gi|145476559|ref|XP_001424302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391366|emb|CAK56904.1| unnamed protein product [Paramecium tetraurelia]
Length = 449
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 236/384 (61%), Gaps = 43/384 (11%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
++K+Q+ AGGRG G +G K GV +++ ++MIG+KL+T QTPK G+ VN V
Sbjct: 87 ILKSQVHAGGRGKGTLSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAV 146
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+V + V+I R+ Y + DR P ++ S +GG +IE VA P+ + +PID++ G+T
Sbjct: 147 LVHEGVDIVRQLYLAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDINTGLT 206
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ +A + D L+ Q ++ +A V++L N
Sbjct: 207 DQIANKVVDTLQLQ-SVRQQA---VEQLRN------------------------------ 232
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVS----ESD 284
L+ +F+S+DATQ+EINP + ++ +DAKIN DDNA+FRQK + + S + D
Sbjct: 233 LYKMFISLDATQVEINPWATDPKNQLFCIDAKINVDDNAKFRQKQLVDLRKTSVASEQVD 292
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E A LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG N E +
Sbjct: 293 PHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGANVEQVK 352
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF I++S V+ IL+N+FGGI+ C IA+G++ A + L PLVVRL GTN Q+G +
Sbjct: 353 TAFEILNSHPRVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPLVVRLTGTNSQQGAK 412
Query: 405 ILDE-----SKLPLIFASDLDEAA 423
+LDE +K+ + A+DLD+AA
Sbjct: 413 MLDEFAKSQTKVSITTATDLDDAA 436
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE-----SKLPLIFASDLDEAA 519
A ++ A + L PLVVRL GTN Q+G ++LDE +K+ + A+DLD+AA
Sbjct: 382 AEGIIKAAQLVDLKTPLVVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAA 436
>gi|395783717|ref|ZP_10463566.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
melophagi K-2C]
gi|395425839|gb|EJF91999.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
melophagi K-2C]
Length = 398
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/387 (43%), Positives = 237/387 (61%), Gaps = 37/387 (9%)
Query: 48 YVIKAQILAGGRGLGHFD---NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F + K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGSDAKGGVRLAQSVEEVVANVKEMLGKTLVTKQTGAEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + NI RE Y ++ DR V ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGANIERELYLSLLIDRTVGRVVFVVSTEGGMDIETVAEETPEKILTLPIDYV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + D L DL A + +KL+ +
Sbjct: 163 KGVTSVDCAKLCDAL----DLHDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV+ GK
Sbjct: 310 SAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKDVGLKVPLVVRLEGTNVEHGKE 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACK 430
I++ S L +I A DLD+AA +V A K
Sbjct: 370 IINSSGLNVISADDLDDAAQKIVTAVK 396
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK I++ S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVKDVGLKVPLVVRLEGTNVEHGKEIINSSGLNVISADDLDDAAQKIVTA 394
>gi|145485378|ref|XP_001428697.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395785|emb|CAK61299.1| unnamed protein product [Paramecium tetraurelia]
Length = 425
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 160/384 (41%), Positives = 234/384 (60%), Gaps = 43/384 (11%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
++K+Q+ AGGRG G +G K GV +++ ++MIG+KL+T QTPK G+ VN V
Sbjct: 63 ILKSQVHAGGRGKGTLSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAV 122
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+V + V+I R+ Y + DR P ++ S +GG +IE VA P+ + +PIDV+ G+T
Sbjct: 123 LVHEGVDIVRQLYLAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLT 182
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ +A + D L+ Q ++ +A +++
Sbjct: 183 DQIANKVIDTLQLQA----------------------------------VRQQAIEQLKN 208
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVS----ESD 284
L+ +F+++DATQ+EINP + ++ +DAKIN DDNA+FRQK + + S + D
Sbjct: 209 LYKMFITLDATQVEINPWATDPKNKLFCIDAKINVDDNAKFRQKELIELRKTSVASEQVD 268
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E A LNYV +DGNIGC+VNGAGLAMATMDIIKL+GG+PANFLDVGGG N E +
Sbjct: 269 PHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGANVEQVK 328
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF I++S V+ IL+N+FGGI+ C IA+G++ A + L PLVVRL GTN Q+G +
Sbjct: 329 TAFEILNSHPKVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPLVVRLTGTNSQQGAK 388
Query: 405 ILDE-----SKLPLIFASDLDEAA 423
+LDE +K+ + A+DLD+AA
Sbjct: 389 MLDEFAKSQTKVSITTATDLDDAA 412
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE-----SKLPLIFASDLDEAA 519
A ++ A + L PLVVRL GTN Q+G ++LDE +K+ + A+DLD+AA
Sbjct: 358 AEGIIKAAQLVDLKTPLVVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAA 412
>gi|153008266|ref|YP_001369481.1| succinyl-CoA synthetase subunit beta [Ochrobactrum anthropi ATCC
49188]
gi|404316635|ref|ZP_10964568.1| succinyl-CoA synthetase subunit beta [Ochrobactrum anthropi
CTS-325]
gi|189081761|sp|A6WXE8.1|SUCC_OCHA4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|151560154|gb|ABS13652.1| succinyl-CoA synthetase, beta subunit [Ochrobactrum anthropi ATCC
49188]
Length = 398
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 237/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ ++M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T+ A +AD L+ +G +A + KL+ +
Sbjct: 163 KGVTDEDASKLADALKLEG----QAREDGVKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + V +DAK++FD NA FR +I ++SE D
Sbjct: 194 ----LYKAFTEKDMSLLEINPLIVMTDGRVRVLDAKVSFDGNALFRHPDIQELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPAVQGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|367016371|ref|XP_003682684.1| hypothetical protein TDEL_0G01060 [Torulaspora delbrueckii]
gi|359750347|emb|CCE93473.1| hypothetical protein TDEL_0G01060 [Torulaspora delbrueckii]
Length = 424
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 233/399 (58%), Gaps = 39/399 (9%)
Query: 31 EDARTAT---NILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
E A+TA I + L K+ V+KAQ L GGRG GHFD GFKSGVH + + +
Sbjct: 45 EAAKTADEAFRIAQQLGKKDLVVKAQALTGGRGKGHFDTGFKSGVHMCKTPEQARELAGE 104
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+ HKLITKQ+ G V+ V + + V+ E Y I+ DR P++I S GG +IE
Sbjct: 105 MLQHKLITKQSGAKGKLVSAVYLVERVDAKHEAYLSILLDRKSKKPLIICSSEGGMNIEE 164
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA K P +K I +GIT+ + I++ NL S AQ
Sbjct: 165 VAEKNPDAIKKFYITPSEGITDETCKAISE--------------------NLGFSKEAQ- 203
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET---DEREVISVDAKINFD 264
+AA V+KL+ +F DATQ+EINP E + +V+ +DAK FD
Sbjct: 204 ------------PEAADAVRKLYKIFSERDATQIEINPFSEVANNKDHKVMCMDAKFGFD 251
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
NA F+Q+ I+ ++S+ DP EV A +YNLN+V + GNIGCLVNGAGLAMATMD+IKLH
Sbjct: 252 SNASFKQEGIWKWRDLSQEDPDEVVAQEYNLNFVKLQGNIGCLVNGAGLAMATMDVIKLH 311
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
GG+PANFLD GGG E+I +AF +I S+ +V I VN+FGGIV C +A+GLV A K
Sbjct: 312 GGDPANFLDCGGGATPETIKKAFELILSNKSVDAIFVNIFGGIVRCDYVAQGLVQAAKEL 371
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+S+P+V RL+GT + EG+ I+ L + +LD AA
Sbjct: 372 GVSVPIVARLQGTKLDEGQEIIRNCGLKIHSFDELDPAA 410
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LV A K +S+P+V RL+GT + EG+ I+ L + +LD AA
Sbjct: 361 AQGLVQAAKELGVSVPIVARLQGTKLDEGQEIIRNCGLKIHSFDELDPAA 410
>gi|145548656|ref|XP_001460008.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427836|emb|CAK92611.1| unnamed protein product [Paramecium tetraurelia]
Length = 425
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 234/385 (60%), Gaps = 43/385 (11%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
++K+Q+ AGGRG G +G K GV +++ ++MIG+KL+T QTPK G+ VN V
Sbjct: 63 ILKSQVHAGGRGKGTLSSGLKGGVKICKTPEEVANYTKQMIGYKLVTHQTPKEGLQVNAV 122
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+V + V+I R+ Y + DR P ++ S +GG +IE VA P+ + +PIDV+ G+T
Sbjct: 123 LVHEGVDIVRQLYIAFILDRNSQKPAIVASINGGMEIEEVAKTDPNSIIVLPIDVNTGLT 182
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ +A + D L+ Q ++ +A +++
Sbjct: 183 DQIANKVIDTLQLQA----------------------------------VRQQAIEQLKN 208
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVS----ESD 284
L+ +F+++DATQ+EINP + ++ +DAKIN DDNA+FRQK + + S + D
Sbjct: 209 LYKMFITLDATQVEINPWATDPKNKLFCIDAKINVDDNAKFRQKELIELRKTSVASEQVD 268
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E A LNYV +DGNIGC+VNGAGLAMATMDIIKL+GG+PANFLDVGGG N E +
Sbjct: 269 PHEELALAAGLNYVALDGNIGCMVNGAGLAMATMDIIKLYGGDPANFLDVGGGANVEQVK 328
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF I++S V+ IL+N+FGGI+ C IA+G++ A + L PLVVRL GTN Q+G +
Sbjct: 329 TAFEILNSHPKVETILINIFGGIMKCNIIAEGIIKAAQLVDLKTPLVVRLTGTNSQQGAK 388
Query: 405 ILDE-----SKLPLIFASDLDEAAS 424
+LDE +K+ + A+DLD+AA
Sbjct: 389 MLDEFAKSQTKVSITTATDLDDAAQ 413
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE-----SKLPLIFASDLDEAA 519
A ++ A + L PLVVRL GTN Q+G ++LDE +K+ + A+DLD+AA
Sbjct: 358 AEGIIKAAQLVDLKTPLVVRLTGTNSQQGAKMLDEFAKSQTKVSITTATDLDDAA 412
>gi|399059982|ref|ZP_10745407.1| succinyl-CoA synthetase, beta subunit [Novosphingobium sp. AP12]
gi|398038573|gb|EJL31731.1| succinyl-CoA synthetase, beta subunit [Novosphingobium sp. AP12]
Length = 399
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 235/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ ++M+G+ L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELSADAKGGVRLAKSIEEVEAFAKEMLGNTLVTIQTGDAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y +V DR + +I+S GG DIE VA TP + TI +D+
Sbjct: 103 VNRLYVTDGVDIEKEYYLSMVVDRASSRVALIVSTEGGMDIEEVAHSTPERITTITVDIA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A L+ G+L + AQKI+
Sbjct: 163 SGFQPHHGRAVAFALKLTGELNKQ----------------AQKIS--------------- 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+ F+S+D LEINPLVET + ++ +D K++FD NA +R ++ + +E D
Sbjct: 192 --KQLYEAFVSLDCDMLEINPLVETKDGNLLVLDTKMSFDSNALYRHPDVMELRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P EV+ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PAEVEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II +D VK ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILADPAVKGILVNIFGGIMKCDVIAEGIVAAAKEVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S L ++ A+DL +AA + A
Sbjct: 370 ILANSGLAIVPANDLGDAAKKIVA 393
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S L ++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLAIVPANDLGDAAKKIV 392
>gi|328724202|ref|XP_001942971.2| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Acyrthosiphon pisum]
Length = 488
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 170/394 (43%), Positives = 238/394 (60%), Gaps = 35/394 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
+ A I++ L + +KAQ+LAGGRGLGHF GFK GV + ++ + ++M+G
Sbjct: 105 GKEAAEIVRSLGLTDIAVKAQVLAGGRGLGHFKKGFKGGVKMVDTAEEAENVSDQMLGDY 164
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LITKQT + G N VMVA+ V +E YF ++ +R GPV+I S GG +IE VA
Sbjct: 165 LITKQTGEKGRICNAVMVAERVYARKEFYFAVMMERAFGGPVLIASSQGGVNIEKVAEDN 224
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + +PID+ +GI+ LA D+ T+V L +K
Sbjct: 225 PEAILYMPIDITKGISRELALDVI--------------TKV---------GLTKK----- 256
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET-DEREVISVDAKINFDDNAEFRQ 271
K + A + KL++LFL+ DA +E+NP E+ +DAK FDDNAE+RQ
Sbjct: 257 ------KDETADVILKLYDLFLTKDALLIEVNPYAESISTGGYYCLDAKFRFDDNAEYRQ 310
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K +F + ++ D +EV+ASK+NLNY+ +DG IGCLVNGAGLAMATMDII LHGG PANF
Sbjct: 311 KELFDLRDWTQEDEKEVEASKFNLNYIALDGTIGCLVNGAGLAMATMDIINLHGGFPANF 370
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG + +AF+II+SD V I+VN+FGGI+ C IA G++ A + L++P++
Sbjct: 371 LDVGGGATASQVKEAFKIITSDPKVCAIMVNIFGGIMRCDIIADGIIAAAQELNLNVPII 430
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
RL+GTNV E K + S + ++ +LDEAA L
Sbjct: 431 CRLQGTNVDEAKLRIANSGMKILPVDNLDEAARL 464
>gi|444309304|ref|ZP_21144943.1| succinyl-CoA synthetase subunit beta [Ochrobactrum intermedium M86]
gi|443487362|gb|ELT50125.1| succinyl-CoA synthetase subunit beta [Ochrobactrum intermedium M86]
Length = 398
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 237/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ ++M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T+ A +AD L+ +G +A + KL+ +
Sbjct: 163 KGVTDEDANKLADALKLEG----QAREDGVKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + V +DAK++FD NA FR +I ++SE D
Sbjct: 194 ----LYKAFTEKDMSLLEINPLIVMTDGRVRVLDAKVSFDGNALFRHPDIQELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPAVQGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|85375531|ref|YP_459593.1| succinyl-CoA synthetase subunit beta [Erythrobacter litoralis
HTCC2594]
gi|122543284|sp|Q2N695.1|SUCC_ERYLH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|84788614|gb|ABC64796.1| succinyl-CoA synthetase, beta subunit [Erythrobacter litoralis
HTCC2594]
Length = 399
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 230/384 (59%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++D+ +M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKSIEDVEASAREMLGNTLVTVQTGEEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I E Y +V DR +I+S GG DIE VA TP + TI ID
Sbjct: 103 VNRLYVTDGVDIASEYYLSMVVDRASGRVGMIVSTEGGMDIEEVAHSTPEKITTITIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG F+ + +A L+ GDL +A
Sbjct: 163 QG---------------------------------FMPHHGRAVAFALKLSGDLNKQAQK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+ F+ +D LEINPLVET++ +++ +D K++ D NA +R K++ + +E D
Sbjct: 190 LAKQLYTAFMDLDCEMLEINPLVETEDGQLLVLDTKMSIDGNALYRHKDVEEMRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P EV+AS+Y+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG E +
Sbjct: 250 PAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D V+ ILVN+FGGI+ C TIA+G+V A K +L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVVAAKEVELDVPLVVRLEGTNVEKGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A DL +AA + A
Sbjct: 370 ILANSGLPIVPADDLGDAARKIVA 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L +PLVVRLEGTNV++GK IL S LP++ A DL +AA +
Sbjct: 339 AEGIVVAAKEVELDVPLVVRLEGTNVEKGKDILANSGLPIVPADDLGDAARKIV 392
>gi|365858245|ref|ZP_09398193.1| succinate-CoA ligase, beta subunit [Acetobacteraceae bacterium
AT-5844]
gi|363714485|gb|EHL97990.1| succinate-CoA ligase, beta subunit [Acetobacteraceae bacterium
AT-5844]
Length = 398
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 172/389 (44%), Positives = 235/389 (60%), Gaps = 36/389 (9%)
Query: 48 YVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
YV+K+QI AGGRG G F D K GV +V D+ E MIG L+TKQT + G V
Sbjct: 43 YVVKSQIHAGGRGAGRFKEDPNGKGGVRVVKSVADVKAAAEAMIGKTLVTKQTGEAGKQV 102
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
++V V +I RE Y ++ DR + V++ S GG +IE VA P + +D
Sbjct: 103 SRVYVEDGCDIKRELYLSLLVDRDSSRIVIMASTEGGMEIEEVAEHNPEKILKAIVDPAS 162
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G++ + +A L +G +++A F +F
Sbjct: 163 GVSGFHCRKLAFGLGLEG----------------------KQVASFTKF----------- 189
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
V ++ F+ +D +E+NPLV T E++++DAK++FDDNA FR K++ + + SE DP
Sbjct: 190 VTSMYKAFVELDCAIVEVNPLVVTGAGEIVALDAKVSFDDNALFRHKDLEALRDDSEMDP 249
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
+E++A K++LNYV +DG IGC+VNGAGLAM+TMDIIKL+G PANFLDVGG E + +
Sbjct: 250 KELEAVKHDLNYVALDGEIGCMVNGAGLAMSTMDIIKLYGSSPANFLDVGGTATAERVTE 309
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AFRII+SDSNVK ILVN+FGGI C IA G+V A K+ LS+PLVVRLEGTNV+ GK+I
Sbjct: 310 AFRIITSDSNVKAILVNIFGGIAKCDMIANGIVEAAKTLTLSVPLVVRLEGTNVELGKKI 369
Query: 406 LDESKLPLIFASDL-DEAASLVNACKSFK 433
L ES L +I A +L D A +V A K K
Sbjct: 370 LAESGLKIIPADNLADAAEKVVAAVKGAK 398
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K+ LS+PLVVRLEGTNV+ GK+IL ES L +I A +L +AA + A
Sbjct: 338 ANGIVEAAKTLTLSVPLVVRLEGTNVELGKKILAESGLKIIPADNLADAAEKVVAA 393
>gi|393720311|ref|ZP_10340238.1| succinyl-CoA synthetase subunit beta [Sphingomonas echinoides ATCC
14820]
Length = 399
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 170/384 (44%), Positives = 230/384 (59%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV + ++ M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKTLDEVRAAATDMLGNTLVTVQTGEHGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + V+I +E Y ++ +R ++ S GG DIE VA +TP + I ID
Sbjct: 103 VNRLYITDGVDIAKEFYLALLVNRATGRVSMVASTEGGMDIETVAHETPEKIHAIDIDCA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A LE +GDL +AA+ KL++ FL +
Sbjct: 163 TGFQPHHGRAVAAALELKGDLAKQAASVASKLYDAFLGT--------------------- 201
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
DA Q+EINPL TD+ +++ +DAK+ FD NA FR K++ + +E D
Sbjct: 202 ------------DAEQIEINPLAVTDDNKLVVLDAKVGFDGNAMFRHKDLLELRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PAELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II SD NVK ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNVQ GK
Sbjct: 310 AAFKIILSDPNVKGILVNIFGGIMRCDIIAEGIVAAAKEVNLSVPLVVRLEGTNVQLGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S L ++ A+DL +AA + A
Sbjct: 370 ILANSGLAIVPANDLGDAAKKIVA 393
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ GK IL S L ++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVQLGKDILANSGLAIVPANDLGDAAKKIV 392
>gi|421747170|ref|ZP_16184910.1| succinyl-CoA synthetase subunit beta [Cupriavidus necator HPC(L)]
gi|409774236|gb|EKN55884.1| succinyl-CoA synthetase subunit beta [Cupriavidus necator HPC(L)]
Length = 402
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 237/396 (59%), Gaps = 35/396 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIGHKL 93
A N + L +V+K+QI AGGRG G F N K GV +++ + KM+G L
Sbjct: 31 AANAARTLGGPLWVVKSQIHAGGRGAGRFQNDPDGKGGVRVARSLEAVREEAGKMLGAVL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+TKQT G V ++ + + +I RE YF ++ DR + ++ S GG DIE VAA TP
Sbjct: 91 VTKQTGAAGREVRRLYIEEGCDIARELYFGMLIDRATSRITLMASTEGGMDIEEVAAHTP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + ID GI A+ +A L +G +V + LFL++
Sbjct: 151 EKILKLAIDPATGIQPFHARRLAFGLGLRG-------KQVGEATRLFLAA---------- 193
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
+ F +DA+ +EINPLV T V+++DAK NFDDNA FR +
Sbjct: 194 ----------------YRAFTELDASIVEINPLVVTHSGHVMALDAKFNFDDNALFRHPD 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I + + +E DP E +A+++ LNYV +DGNIGC+VNGAGLAMATMDII+LHGG+PANFLD
Sbjct: 238 IEAMRDEAEEDPAETEAARHALNYVKLDGNIGCMVNGAGLAMATMDIIQLHGGKPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG E + AFR+I +D NV+ ILVN+FGGI+ C IA+G+V A + L++PLVVR
Sbjct: 298 VGGGATRERVATAFRLILADRNVEGILVNIFGGIMRCDVIAEGVVAAAREVDLTVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
LEGTNV+ GK IL +S LP++ A DL +AA+ V A
Sbjct: 358 LEGTNVELGKAILRDSGLPIVSADDLADAATKVVAA 393
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L++PLVVRLEGTNV+ GK IL +S LP++ A DL +AA + A
Sbjct: 338 AEGVVAAAREVDLTVPLVVRLEGTNVELGKAILRDSGLPIVSADDLADAATKVVAA 393
>gi|366994085|ref|XP_003676807.1| hypothetical protein NCAS_0E03800 [Naumovozyma castellii CBS 4309]
gi|342302674|emb|CCC70450.1| hypothetical protein NCAS_0E03800 [Naumovozyma castellii CBS 4309]
Length = 427
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 235/388 (60%), Gaps = 37/388 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K L FK+ V+KAQ L GGRG GHF++G+KSGVH ++ + +MIG KLITKQT
Sbjct: 58 KQLGFKDMVVKAQALTGGRGKGHFESGYKSGVHMVKTPEEARQVASEMIGKKLITKQTGA 117
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + + ++ E+Y I+ DR P++I+S GG +IE++A + P +K
Sbjct: 118 KGKIVSSVFIVEKCDVKHESYLSILMDRQVRKPLIIVSKDGGMNIEDIAKENPDSIKKFY 177
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+ E+ ++++ D + A K+A L F+ L
Sbjct: 178 V-------ENSSKELDDVI-------------------------AHKVAQNLGFQDGLIE 205
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDERE----VISVDAKINFDDNAEFRQKNIFS 276
AA V+ L+ +F DATQ+EINP+ E E V +DAK FDDNA FRQ I++
Sbjct: 206 DAAKMVKNLYKIFQEKDATQIEINPISEIVNHEGKPAVACMDAKFGFDDNASFRQSEIYN 265
Query: 277 Q-NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++S+ DP EV+A KY LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD G
Sbjct: 266 EWRDLSQEDPNEVEAKKYELNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPANFLDCG 325
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E+I + F +I S+ V I VN+FGGIV C +A GLV A K +++P+V RL+
Sbjct: 326 GGATPETIKKGFELILSNEKVDAIFVNIFGGIVRCDFVAMGLVAAAKELGVTVPIVARLQ 385
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTN++EG++I+ +S + + LD AA
Sbjct: 386 GTNLEEGQKIIKDSGVKIYSFDQLDPAA 413
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LV A K +++P+V RL+GTN++EG++I+ +S + + LD AA
Sbjct: 364 AMGLVAAAKELGVTVPIVARLQGTNLEEGQKIIKDSGVKIYSFDQLDPAA 413
>gi|451942728|ref|YP_007463365.1| succinyl-CoA synthetase beta subunit [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451902115|gb|AGF76577.1| succinyl-CoA synthetase beta subunit [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 398
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/385 (43%), Positives = 237/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F + K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSSDAKGGVRLAKSVEEVVAHVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRTVGRVAFVVSTEGGMDIETVAEETPEKIFTLPIDAV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + D LE L A + +KL+ +
Sbjct: 163 QGVTSADCTRLCDALE----LHDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ +F D + LEINPL+ + + +DAK++FD+N+ FR +I ++SE D
Sbjct: 194 ----LYKVFCEKDMSLLEINPLIVMKDGRLRVLDAKVSFDNNSLFRHPDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVVAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ ES L +I A DLD+AA + A
Sbjct: 370 IISESGLNVIPADDLDDAAQKIVAA 394
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA + A
Sbjct: 339 AEGVVVAVREVGLKVPLVVRLEGTNVEQGKAIISESGLNVIPADDLDDAAQKIVAA 394
>gi|407780995|ref|ZP_11128215.1| succinyl-CoA synthetase [Oceanibaculum indicum P24]
gi|407208421|gb|EKE78339.1| succinyl-CoA synthetase [Oceanibaculum indicum P24]
Length = 398
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/396 (44%), Positives = 234/396 (59%), Gaps = 35/396 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIG 90
A+ A + K L YV+K+QI AGGRG G F D K GV +V D+ + MIG
Sbjct: 28 AQQAAEVAKGLGGPVYVVKSQIHAGGRGAGRFKDDPNGKGGVRVVKSVDDVKSNAQAMIG 87
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G V +V V + +I RE Y ++ DR + V+ S GG +IE VAA
Sbjct: 88 KVLVTKQTGAEGKEVTRVYVEEGCDIKRELYLGMLIDRATSRITVMASTEGGMEIEEVAA 147
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+ P + + ID G+ A+ IA L +G +V L+
Sbjct: 148 EHPEKILKVAIDPATGMQAFHARQIAFGLGLEG-------KQVNAAVKFMLA-------- 192
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
++ F +D + +EINPLV T + VI++DAK+NFDDNA FR
Sbjct: 193 ------------------MYKAFTELDCSIVEINPLVVTGDGAVIALDAKVNFDDNALFR 234
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
+I + E +P E++A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPAN
Sbjct: 235 HADIEELRDEDEENPMELEATKHGLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPAN 294
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG +E + AF+II SD NV+ ILVN+FGGI+ C IA+G+V A + L +PL
Sbjct: 295 FLDVGGGATKERVTTAFKIILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLHVPL 354
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
VVRLEGTNV+ GK+IL ES LP+I A +L +AA V
Sbjct: 355 VVRLEGTNVELGKKILSESGLPIISADNLADAAEKV 390
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV+ GK+IL ES LP+I A +L +AA + A
Sbjct: 338 AEGVVAAAREVSLHVPLVVRLEGTNVELGKKILSESGLPIISADNLADAAEKVVKA 393
>gi|319406382|emb|CBI80023.1| succinyl-CoA synthetase, beta chain [Bartonella sp. AR 15-3]
Length = 398
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 241/404 (59%), Gaps = 36/404 (8%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPI 84
V + A +K L YV+K+QI AGGRG G F K GV +V+++
Sbjct: 23 VAIYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFKELGPNSKGGVRLAKSVEEVITN 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+++M+G LITKQT G VN++ + NI RE Y ++ DR ++S GG D
Sbjct: 83 VKEMLGKTLITKQTGPEGKQVNRLYIEDGANIERELYLSLLVDRTVGQVSFVVSTEGGMD 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VA +TP + T+PID +G+T + + D L+ L A + +KL+ +
Sbjct: 143 IETVAEETPEKIFTLPIDPTKGVTPTDCTKLCDSLK----LCDSAREDGEKLFPI----- 193
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
L+ F D + LEINPL+ D + +DAK++FD
Sbjct: 194 ------------------------LYRAFCEKDMSLLEINPLIVMDNGRLRVLDAKVSFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
+NA FR +I ++SE DP+E++ASK++L YV +DG IGC+VNGAGLAMATMDIIKL+
Sbjct: 230 NNALFRHPDILELRDLSEEDPKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
G EPANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G++ A K
Sbjct: 290 GAEPANFLDVGGGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA + A
Sbjct: 350 GLKVPLVVRLEGTNVEQGKAIISESGLNVISADDLDDAAQKIVA 393
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEQGKAIISESGLNVISADDLDDAAQKIVAA 394
>gi|49474816|ref|YP_032858.1| succinyl-CoA synthetase subunit beta [Bartonella quintana str.
Toulouse]
gi|81646720|sp|Q6FYD1.1|SUCC_BARQU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|49240320|emb|CAF26802.1| Succinyl-CoA synthetase beta chain [Bartonella quintana str.
Toulouse]
Length = 398
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/385 (43%), Positives = 238/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F D K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELDLDSKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+P+D
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + + D LE + A + +KL+ +
Sbjct: 163 QGVTSADCKRLCDALELHDN----ARKDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAKI+FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKISFDNNALFRHPDILELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTN+++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNIEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I ASDLD+AA + A
Sbjct: 370 IISDSGLNVISASDLDDAAQKIIAA 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTN+++GK I+ +S L +I ASDLD+AA I A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNIEQGKAIISDSGLNVISASDLDDAAQKIIAA 394
>gi|15966808|ref|NP_387161.1| succinyl-CoA synthetase subunit beta [Sinorhizobium meliloti 1021]
gi|334317810|ref|YP_004550429.1| succinyl-CoA ligase subunit beta [Sinorhizobium meliloti AK83]
gi|384530934|ref|YP_005715022.1| succinyl-CoA ligase subunit beta [Sinorhizobium meliloti BL225C]
gi|384537647|ref|YP_005721732.1| succinyl-CoA synthetase beta chain [Sinorhizobium meliloti SM11]
gi|407722120|ref|YP_006841782.1| succinyl-CoA synthetase subunit beta [Sinorhizobium meliloti Rm41]
gi|418401799|ref|ZP_12975322.1| succinyl-CoA synthetase subunit beta [Sinorhizobium meliloti
CCNWSX0020]
gi|433614882|ref|YP_007191680.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti GR4]
gi|21264047|sp|Q9EYG9.1|SUCC_RHIME RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|11935179|gb|AAG42005.1| succinyl-CoA synthetase beta subunit [Sinorhizobium meliloti]
gi|15076080|emb|CAC47634.1| Probable succinyl-CoA synthetase beta chain [Sinorhizobium meliloti
1021]
gi|333813110|gb|AEG05779.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Sinorhizobium
meliloti BL225C]
gi|334096804|gb|AEG54815.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Sinorhizobium
meliloti AK83]
gi|336034539|gb|AEH80471.1| succinyl-CoA synthetase beta chain [Sinorhizobium meliloti SM11]
gi|359504211|gb|EHK76750.1| succinyl-CoA synthetase subunit beta [Sinorhizobium meliloti
CCNWSX0020]
gi|407320352|emb|CCM68956.1| succinyl-CoA synthetase subunit beta [Sinorhizobium meliloti Rm41]
gi|429553072|gb|AGA08081.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium meliloti GR4]
Length = 398
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/385 (43%), Positives = 236/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V ++ + M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + +AD L+ +G+ +A A +KL+ +
Sbjct: 163 KGVTAENLKTLADALKLEGEARADA----EKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 DKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
QAF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 QAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|383640170|ref|ZP_09952576.1| succinyl-CoA synthetase subunit beta [Sphingomonas elodea ATCC
31461]
Length = 399
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/384 (44%), Positives = 230/384 (59%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV ++ +M+G+ L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELPAEAKGGVRLAKTEDEVRHAATEMLGNTLVTIQTGAAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y ++ DR ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYVTDGVDIAKEFYLALLVDRATGRVAFVVSTEGGMDIETVAHDTPEKIHTFDVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A+ L +GDL +A SLA K+
Sbjct: 163 TGFMPHHGRAVANALGLEGDLAKQA------------QSLAGKV---------------- 194
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++ FL DA+Q+EINPL TD+ +++ +DAK+ FD N+ FR K++ + +E D
Sbjct: 195 -----YDAFLGTDASQIEINPLAVTDDNKLLVLDAKVGFDSNSLFRHKDLLELRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PMELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II SD VK ILVN+FGGI+ C IA+G+V A K L++PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILSDPAVKGILVNIFGGIMRCDIIAEGIVAAAKEVNLAVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A+DL +AA + A
Sbjct: 370 ILANSGLPIVAANDLGDAAQKIVA 393
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNVQ+GK IL S LP++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLAVPLVVRLEGTNVQQGKDILANSGLPIVAANDLGDAAQKIV 392
>gi|297183589|gb|ADI19716.1| hypothetical protein [uncultured bacterium EB000_36F02]
Length = 386
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/387 (42%), Positives = 244/387 (63%), Gaps = 40/387 (10%)
Query: 40 LKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTP 99
+K L +++V+KAQI AGGRG GV NN+ ++ ++++G +LIT QT
Sbjct: 35 VKSLKTEKFVLKAQIHAGGRGKA-------GGVKILNNIDELTKASKELLGKRLITPQTG 87
Query: 100 KTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTI 159
G V ++ V +S +I +E Y + DR + I S GG DIE VA P + T
Sbjct: 88 PEGKEVKRLYVEESTSIEKEFYLSCLVDRSSSKIAFISSDQGGMDIEEVAKNNPKKITTT 147
Query: 160 PIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLK 219
++ F D+ +K E+ K++NL +G+ K
Sbjct: 148 KVN------------------FNEDISSKDCEEIIKIFNL---------------KGNSK 174
Query: 220 AKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNE 279
+A + +Q ++ +FLS DA+ +EINPL+ T +++++ +DAK+NFDDN+ FR +I +
Sbjct: 175 LEAISLIQSIYKMFLSTDASLVEINPLILTKDQKIVCLDAKVNFDDNSLFRHPDISKLRD 234
Query: 280 VSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVN 339
V+E DP E++ASK++L YV +DG+IGC+VNGAGLAMATMDIIK++G EPANFLDVGGG +
Sbjct: 235 VNEEDPTEIEASKHDLAYVKLDGSIGCMVNGAGLAMATMDIIKIYGEEPANFLDVGGGAS 294
Query: 340 EESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNV 399
+E + AF+II SD NVK IL+N+FGGI+ C +A+G+V+A K K+++PLVVRL GTN
Sbjct: 295 KEKVSSAFKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEIKINVPLVVRLAGTNF 354
Query: 400 QEGKRILDESKLPLIFASDLDEAASLV 426
+EGK+IL+ S L +I A +LD+AA V
Sbjct: 355 EEGKKILNNSGLKIISADNLDDAAKKV 381
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K K+++PLVVRL GTN +EGK+IL+ S L +I A +LD+AA I A
Sbjct: 329 AQGVVDAAKEIKINVPLVVRLAGTNFEEGKKILNNSGLKIISADNLDDAAKKVIGA 384
>gi|157877084|ref|XP_001686874.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
major strain Friedlin]
gi|68129949|emb|CAJ09257.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
major strain Friedlin]
Length = 413
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 227/376 (60%), Gaps = 34/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QILAGGRG G F +GF+ GVH ++ + M+G+ L+TKQT G VN +
Sbjct: 63 VVKSQILAGGRGKGVFKDGFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTL 122
Query: 109 MVAKSV-NITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V ++V I RE Y ++ DR P+ I S GG IE +A P +KT+ ++V +G+
Sbjct: 123 YVTEAVAGIKRELYLSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGV 182
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
A A L F G+ +AA +++ L+N+ S
Sbjct: 183 DHDAAVAYAKELGFAGETTERAAEQIKALYNIGKSK------------------------ 218
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
D T +EINP VE + +V+ +DAK++FDDNA FRQ+ IF+ + ++ D +E
Sbjct: 219 ---------DCTMVEINPFVELENGDVMEIDAKLSFDDNAAFRQRGIFALEDQTQIDSKE 269
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
V A K++LNY+ +DGN+GCLVNGAGLAMATMD I LHGG ANFLD GG +EE I+ AF
Sbjct: 270 VLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDAGGSASEEQIVAAF 329
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II+ DSNVK ILVN+FGGI++C IA+G+VNA K+ +IP+VVRL GTN Q GK I+
Sbjct: 330 KIITGDSNVKSILVNIFGGIMHCDVIAQGVVNASKALNTTIPIVVRLCGTNEQRGKEIIR 389
Query: 408 ESKLPLIFASDLDEAA 423
S L + D D AA
Sbjct: 390 NSGLVIHPVEDFDSAA 405
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA K+ +IP+VVRL GTN Q GK I+ S L + D D AA
Sbjct: 356 AQGVVNASKALNTTIPIVVRLCGTNEQRGKEIIRNSGLVIHPVEDFDSAA 405
>gi|294054271|ref|YP_003547929.1| succinyl-CoA synthetase subunit beta [Coraliomargarita akajimensis
DSM 45221]
gi|293613604|gb|ADE53759.1| succinyl-CoA synthetase, beta subunit [Coraliomargarita akajimensis
DSM 45221]
Length = 398
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/382 (44%), Positives = 228/382 (59%), Gaps = 33/382 (8%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
++ V+KAQI AGGRG G F +G+K GV + + M+G+ L+T QT G V
Sbjct: 42 QKIVVKAQIHAGGRGKGTFVDGYKGGVKVVDGREAALEAAGHMLGNTLVTAQTSAAGRKV 101
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+ + ++ I E Y IV DR V+I S GG DIE VA KTP + +PI
Sbjct: 102 QTLYLTEACEIAHEYYLAIVLDRETAQSVIIASTEGGMDIEEVADKTPEKIIRVPISPTM 161
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+ + +A L F+GD +V++ +
Sbjct: 162 GLRHHHCRRVAFELGFEGD-------QVKQFARILTG----------------------- 191
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
L+ LF +A +EINPL+ T E +V+++DAK++FD NA F+ +I +++E DP
Sbjct: 192 ---LYKLFWEKNAMLVEINPLITTPEGQVVALDAKVSFDGNAVFQHPDIMQLRDLNEEDP 248
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
+EV+ASKYNL+Y+ +DGNI CLVNGAGLAMATMDIIK GGEPANFLDVGGG NE+ +
Sbjct: 249 KEVEASKYNLSYIALDGNIACLVNGAGLAMATMDIIKSFGGEPANFLDVGGGANEDQVTA 308
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+II SD NV+ ILVN+FGGI+ C IA+G+V A K+ +L +PLVVRLEGTNV GK I
Sbjct: 309 AFKIILSDPNVEGILVNIFGGIMKCDVIARGIVAAAKNVELKVPLVVRLEGTNVDAGKEI 368
Query: 406 LDESKLPLIFASDLDEAASLVN 427
L ES + L A L EAA ++
Sbjct: 369 LRESGVALTPADSLVEAAEIIT 390
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K+ +L +PLVVRLEGTNV GK IL ES + L A L EAA
Sbjct: 337 ARGIVAAAKNVELKVPLVVRLEGTNVDAGKEILRESGVALTPADSLVEAA 386
>gi|395792685|ref|ZP_10472109.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella vinsonii
subsp. arupensis Pm136co]
gi|423713347|ref|ZP_17687607.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395423388|gb|EJF89583.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella vinsonii
subsp. arupensis OK-94-513]
gi|395432242|gb|EJF98231.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella vinsonii
subsp. arupensis Pm136co]
Length = 398
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 236/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVEEVVAHVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRTVGRVAFVVSTEGGMDIETVAEETPEKILTLPIDAV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + D L DL+ A + +KL+ +
Sbjct: 163 QGVTAADCTRLCDAL----DLRDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+N+ FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNSLFRHPDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I A DLD+AA + A
Sbjct: 370 IISDSGLNVIPADDLDDAAQKIVAA 394
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIISDSGLNVIPADDLDDAAQKIVAA 394
>gi|393765736|ref|ZP_10354297.1| succinyl-CoA synthetase subunit beta [Methylobacterium sp. GXF4]
gi|392728972|gb|EIZ86276.1| succinyl-CoA synthetase subunit beta [Methylobacterium sp. GXF4]
Length = 398
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 237/405 (58%), Gaps = 36/405 (8%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPI 84
V + D A K+L +V+K+QI AGGRG G F + G K GV T ++ ++
Sbjct: 23 VAIFDPSEAEAAAKELGGPVWVVKSQIHAGGRGKGTFKDAPQGAKGGVRVTKSIDEVKQY 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+M+G L+T QT G VN++ + + I E Y ++ DR G ++S GG D
Sbjct: 83 ASEMLGQTLVTIQTGPAGKQVNRLYIEEGAQIAEEFYLSMLVDRATGGVAFVVSTEGGMD 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VA TP + TIP+D G+ + G AKA
Sbjct: 143 IEAVAHDTPEKIHTIPVDPATGV-----------MPHHGRAVAKA--------------- 176
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
L G +AA+ +KL+ F+S D + LEINPLV T + + +DAKI+FD
Sbjct: 177 -------LGLTGAQAKEAASLTEKLYTAFVSKDMSMLEINPLVLTADGHLKCLDAKISFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
NA ++ +I + + +E D +E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+
Sbjct: 230 SNALYKHADIVALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
G PANFLDVGGG +EE + AF+II++D VK ILVN+FGGI+ C IA+G++ A K+
Sbjct: 290 GESPANFLDVGGGASEEKVTAAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
L +PLVVRLEGTNV+EGK I+ S L +I A DLD+AA + A
Sbjct: 350 GLQVPLVVRLEGTNVEEGKDIIRGSGLNVIPADDLDDAAQKIVAA 394
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K+ L +PLVVRLEGTNV+EGK I+ S L +I A DLD+AA + A
Sbjct: 339 ARGVIAAVKAVGLQVPLVVRLEGTNVEEGKDIIRGSGLNVIPADDLDDAAQKIVAA 394
>gi|154251905|ref|YP_001412729.1| succinyl-CoA synthetase subunit beta [Parvibaculum lavamentivorans
DS-1]
gi|189081764|sp|A7HT39.1|SUCC_PARL1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|154155855|gb|ABS63072.1| succinyl-CoA synthetase, beta subunit [Parvibaculum lavamentivorans
DS-1]
Length = 389
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/391 (43%), Positives = 233/391 (59%), Gaps = 41/391 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+L +V+KAQI AGGRG GV ++ D+ ++IG L+T QT
Sbjct: 36 KELGGPVWVVKAQIHAGGRGKA-------GGVKVVKSLDDVKKEATRLIGSTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G VN++ + +I+RE Y I+ DR + I+S GG DIE VA KTP + +
Sbjct: 89 DGKEVNRLYIEDGSSISRELYLSILVDRATSRVSFIVSTEGGMDIEEVAKKTPEKILSFS 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D GI+ F G +K+A L GD
Sbjct: 149 VDPASGISG-----------FHG----------------------RKVAYALGLEGDQVK 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+ ++KL+ F++ D + LEINPLV T E ++ +DAK+NFD NA +R K+I ++
Sbjct: 176 QGVALIEKLYKAFVTEDMSMLEINPLVVTGEGNLLCLDAKVNFDSNALYRHKDIVELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E DP EV+ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +
Sbjct: 236 TEEDPAEVEASKYDLNYIKLDGKIGCMVNGAGLAMATMDIIKLYGSEPANFLDVGGGATK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + AF+II SD +V+ ILVN+FGGI+ C IA+G++ A K LS+PLVVRLEGTNV
Sbjct: 296 EKVTAAFKIILSDPSVEGILVNIFGGIMRCDIIAEGVIAAAKEVSLSVPLVVRLEGTNVD 355
Query: 401 EGKRILDESKLPLIFASDL-DEAASLVNACK 430
GK+I+ ES LP+I A +L D A +V A K
Sbjct: 356 LGKKIMAESGLPIISADNLADAAEKIVKAVK 386
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K LS+PLVVRLEGTNV GK+I+ ES LP+I A +L +AA + A
Sbjct: 329 AEGVIAAAKEVSLSVPLVVRLEGTNVDLGKKIMAESGLPIISADNLADAAEKIVKA 384
>gi|395791688|ref|ZP_10471144.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella alsatica
IBS 382]
gi|395407991|gb|EJF74611.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella alsatica
IBS 382]
Length = 398
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 235/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSLDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA KTP + T+PIDV
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRSVGRVAFVVSTEGGMDIETVAEKTPEKILTLPIDVT 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + D L L A + +KL+ +
Sbjct: 163 QGVTSDVCARLCDALV----LCDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ +F D + LEINPL+ + + +DAK++FD+NA FR +I + SE D
Sbjct: 194 ----LYKVFCEKDMSLLEINPLIVMKDGHLRILDAKVSFDNNALFRHPDILELRDTSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
I+ +S L +I A DLD+AA + A
Sbjct: 370 IISDSGLNVIPADDLDDAAQKIVA 393
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIISDSGLNVIPADDLDDAAQKIVAA 394
>gi|163869364|ref|YP_001610620.1| succinyl-CoA synthetase subunit beta [Bartonella tribocorum CIP
105476]
gi|189046886|sp|A9IZV3.1|SUCC_BART1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|161019067|emb|CAK02625.1| succinyl-CoA synthetase, beta chain [Bartonella tribocorum CIP
105476]
Length = 398
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 166/385 (43%), Positives = 237/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGQFKELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PIDV
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVT 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + + D LE L A + +KL+ +
Sbjct: 163 EGVTSADCARLCDALE----LHDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+++S L +I A DLD+AA + A
Sbjct: 370 IINDSGLNVIPADDLDDAAQKIVAA 394
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+++S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIINDSGLNVIPADDLDDAAQKIVAA 394
>gi|119383311|ref|YP_914367.1| succinyl-CoA synthetase subunit beta [Paracoccus denitrificans
PD1222]
gi|189081763|sp|A1AZH7.1|SUCC_PARDP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|119373078|gb|ABL68671.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Paracoccus
denitrificans PD1222]
Length = 397
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 235/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+KAQI AGGRG GHF + G K GV +V++ + +M+G L+T QT +TG
Sbjct: 43 WVVKAQIHAGGRGKGHFKEKEAGEKGGVRLAKSVEEAEELARQMLGRTLVTHQTGETGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR + + S GG DIE VAA TP + + +D
Sbjct: 103 VNRIYIEDGSDIERELYLALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+++ F G +++A L G +
Sbjct: 163 SGLSD-----------FHG----------------------RRVAFALGLSGAQVKQCVA 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V+ L+ +F+ D LEINPL+ + + ++DAK+ FD+NA +RQ +I + + +E D
Sbjct: 190 LVKNLYRMFIEKDMEMLEINPLIVMKDGNLKALDAKMGFDNNALYRQPDILALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E+ ASK++LNY+ +DG IGC+VNGAGLAMATMDIIKL G EPANFLDVGGG +E +
Sbjct: 250 PKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLFGAEPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
+AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 EAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLEGTNVELGKQ 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L +I A DL +AA +V A K
Sbjct: 370 IIGESGLNVIAADDLSDAAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I+ ES L +I A DL +AA + A
Sbjct: 339 AEGIIAAVKEVGLQVPLVVRLEGTNVELGKQIIGESGLNVIAADDLSDAAQKIVKA 394
>gi|326386303|ref|ZP_08207927.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209528|gb|EGD60321.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Novosphingobium
nitrogenifigens DSM 19370]
Length = 399
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 174/396 (43%), Positives = 233/396 (58%), Gaps = 36/396 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHK 92
A K L YV+KAQI AGGRG G F K GV + ++ +M+G+
Sbjct: 31 AVEAAKQLPGPVYVVKAQIHAGGRGKGKFKELPADAKGGVRLAKTIGEVETHAREMLGNT 90
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT + G VN++ V V+I +E Y +V DR +I+S GG DIE VA T
Sbjct: 91 LVTVQTGEAGKQVNRLYVTDGVDIAKEYYLSLVVDRGTGRVALIVSTEGGMDIEEVAHST 150
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + TI ID QG + +A L+ G FL+ AQ++A
Sbjct: 151 PEKITTIVIDPAQGFMPHHGRAVAFALKLSG----------------FLNKQAQQLA--- 191
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ L+ F+S+D LEINPLVET + +++ +DAK++FD NA +R
Sbjct: 192 --------------KSLYEAFVSLDCAMLEINPLVETRDGQLLVLDAKLSFDSNALYRHP 237
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+ +E DP E++ASKY+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFL
Sbjct: 238 EEVVLRDETEEDPAEIEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFL 297
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + AF+II D VK ILVN+FGGI+ C IA+G+V A K LS+PLVV
Sbjct: 298 DVGGGATKEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVV 357
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
RLEGTNV++GK IL S LP++ A+DL +AA + A
Sbjct: 358 RLEGTNVEKGKEILTHSGLPIVPANDLGDAAKKIVA 393
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV++GK IL S LP++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVEKGKEILTHSGLPIVPANDLGDAAKKIV 392
>gi|261332823|emb|CBH15818.1| succinyl-CoA ligase [GDP-forming] beta-chain,putative [Trypanosoma
brucei gambiense DAL972]
Length = 507
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 167/378 (44%), Positives = 231/378 (61%), Gaps = 38/378 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QILAGGRG+G F +GFK GVH + + +M+ + L+TKQT G V+++
Sbjct: 153 VVKSQILAGGRGMGTFVDGFKGGVHVCKDAAEALACARRMLNNTLVTKQTGPKGQKVSRL 212
Query: 109 MVAKSVN-ITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V ++++ I RE Y ++ DR PV I S GG IE +A K P +K + I+V +GI
Sbjct: 213 YVTEAISGIKRELYLALLLDRKTASPVFIGSAEGGMGIEELAQKQPDKIKKMRINVQEGI 272
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
+ L F A L F G AA +++
Sbjct: 273 NHD------NCLTF---------------------------AHELGFTGRAAENAAEQIK 299
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+N+ S D T +EINPLVE + +V+ +DAK++FDDNAEFRQ +IF+ + ++ DP+E
Sbjct: 300 ALYNVGKSKDCTMVEINPLVELENGDVMCIDAKLSFDDNAEFRQHDIFALADATQIDPKE 359
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
V A KY+LNY+ +DGN+GCLVNGAGLAMATMD+I GG+PANFLDVGG +E I+ AF
Sbjct: 360 VVAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISHGGGKPANFLDVGGSATKEQIVAAF 419
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK----LSIPLVVRLEGTNVQEGK 403
II+ D V+ ILVN+FGGI+ C TIA+G+V A + K +P+VVRL G+ +EGK
Sbjct: 420 EIITGDEAVRSILVNIFGGIMRCDTIAEGIVAASRMLKSKGVREVPVVVRLSGSKEEEGK 479
Query: 404 RILDESKLPLIFASDLDE 421
RIL ES LPL A + +E
Sbjct: 480 RILKESGLPLHPAQNFEE 497
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 484 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
+P+VVRL G+ +EGKRIL ES LPL A + +E
Sbjct: 464 VPVVVRLSGSKEEEGKRILKESGLPLHPAQNFEE 497
>gi|71747842|ref|XP_822976.1| succinyl-CoA ligase [GDP-forming] beta-chain [Trypanosoma brucei]
gi|70832644|gb|EAN78148.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 506
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/378 (44%), Positives = 231/378 (61%), Gaps = 38/378 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QILAGGRG+G F +GFK GVH + + +M+ + L+TKQT G V+++
Sbjct: 152 VVKSQILAGGRGMGTFVDGFKGGVHVCKDAAEALACARRMLNNTLVTKQTGPKGQKVSRL 211
Query: 109 MVAKSVN-ITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V ++++ I RE Y ++ DR PV I S GG IE +A K P +K + I+V +GI
Sbjct: 212 YVTEAISGIKRELYLALLLDRKTASPVFIGSAEGGMGIEELAQKQPDKIKKMRINVQEGI 271
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
+ L F A L F G AA +++
Sbjct: 272 NHD------NCLTF---------------------------AHELGFTGRAAENAAEQIK 298
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+N+ S D T +EINPLVE + +V+ +DAK++FDDNAEFRQ +IF+ + ++ DP+E
Sbjct: 299 ALYNVGKSKDCTMVEINPLVELENGDVMCIDAKLSFDDNAEFRQHDIFALADATQIDPKE 358
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
V A KY+LNY+ +DGN+GCLVNGAGLAMATMD+I GG+PANFLDVGG +E I+ AF
Sbjct: 359 VVAKKYDLNYIALDGNVGCLVNGAGLAMATMDLISHGGGKPANFLDVGGSATKEQIVAAF 418
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK----LSIPLVVRLEGTNVQEGK 403
II+ D V+ ILVN+FGGI+ C TIA+G+V A + K +P+VVRL G+ +EGK
Sbjct: 419 EIITGDEAVRSILVNIFGGIMRCDTIAEGIVAASRMLKSKGVREVPVVVRLSGSKEEEGK 478
Query: 404 RILDESKLPLIFASDLDE 421
RIL ES LPL A + +E
Sbjct: 479 RILKESGLPLHPAQNFEE 496
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 484 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
+P+VVRL G+ +EGKRIL ES LPL A + +E
Sbjct: 463 VPVVVRLSGSKEEEGKRILKESGLPLHPAQNFEE 496
>gi|395789026|ref|ZP_10468556.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella taylorii
8TBB]
gi|395431160|gb|EJF97187.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella taylorii
8TBB]
Length = 398
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 235/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSVEEVIANVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRTVGRVAFVVSTEGGMDIETVAEETPEKILTLPIDTT 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T + + D LE L A + +KL+ +
Sbjct: 163 HGVTSADCTRLCDALE----LHDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ +F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKVFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I A DLD+AA + A
Sbjct: 370 IISDSGLNVIPADDLDDAAQKIVAA 394
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIISDSGLNVIPADDLDDAAQKIVAA 394
>gi|395767593|ref|ZP_10448126.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella doshiae
NCTC 12862]
gi|395413956|gb|EJF80409.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella doshiae
NCTC 12862]
Length = 398
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 234/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFD---NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F + K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELASDAKGGVRLAKSVEEVVANVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V ++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+P++
Sbjct: 103 VKRLYIEDGADIERELYLSLLVDRTVGRVAFVVSTEGGMDIETVAEETPEKILTLPVNFE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QGIT + D LE G A + +KL+ +
Sbjct: 163 QGITSVDCARLCDALELSG----TAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ +F D + LEINPL+ + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKVFCEKDMSLLEINPLIVMSSGHLRVLDAKVSFDNNALFRHPDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLQVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I A DLD+AA + A
Sbjct: 370 IISDSSLNVIPADDLDDAAQKIVAA 394
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLQVPLVVRLEGTNVEQGKAIISDSSLNVIPADDLDDAAQKIVAA 394
>gi|134085328|ref|NP_001076816.1| succinate-CoA ligase, GDP-forming, beta subunit [Xenopus (Silurana)
tropicalis]
gi|134023817|gb|AAI35373.1| LOC496495 protein [Xenopus (Silurana) tropicalis]
Length = 269
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 153/286 (53%), Positives = 197/286 (68%), Gaps = 33/286 (11%)
Query: 138 SPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLW 197
SP GG DIE VA KTP L+ ID+ +GI +S A
Sbjct: 7 SPQGGMDIEEVAEKTPELIFKEEIDIFEGIKDSQAL------------------------ 42
Query: 198 NLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISV 257
++AD L F+G L+ +AA ++++L++LFL VDATQ+E+NP ET E +V+
Sbjct: 43 ---------RMADNLGFKGPLQQQAAEQIKRLYHLFLKVDATQVEVNPFGETPEGQVVCF 93
Query: 258 DAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMAT 317
DAKINFDDNAEFRQK IF+ ++ SE+DP E +A+ Y+L Y+GMDGNI C VNGAGLAMAT
Sbjct: 94 DAKINFDDNAEFRQKEIFAMDDTSETDPIENEANSYDLKYIGMDGNIACFVNGAGLAMAT 153
Query: 318 MDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGL 377
DII LHGG+PANFLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+
Sbjct: 154 CDIIDLHGGKPANFLDLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGI 213
Query: 378 VNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A+DLD+AA
Sbjct: 214 TKACRELELKVPLVVRLEGTNVHEAKRILAESGLPITSANDLDDAA 259
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E KRIL ES LP+ A+DLD+AA
Sbjct: 210 ANGITKACRELELKVPLVVRLEGTNVHEAKRILAESGLPITSANDLDDAA 259
>gi|403531122|ref|YP_006665651.1| succinyl-CoA synthetase subunit beta [Bartonella quintana RM-11]
gi|403233193|gb|AFR26936.1| succinyl-CoA synthetase subunit beta [Bartonella quintana RM-11]
Length = 398
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 237/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F D K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELDLDSKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+P+D
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + + D LE + + +KL+ +
Sbjct: 163 QGVTSADCKRLCDALELHDNGRKDG----EKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTN+++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNIEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I ASDLD+AA + A
Sbjct: 370 IISDSGLNVISASDLDDAAQKIIAA 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTN+++GK I+ +S L +I ASDLD+AA I A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNIEQGKAIISDSGLNVISASDLDDAAQKIIAA 394
>gi|365983086|ref|XP_003668376.1| hypothetical protein NDAI_0B00990 [Naumovozyma dairenensis CBS 421]
gi|343767143|emb|CCD23133.1| hypothetical protein NDAI_0B00990 [Naumovozyma dairenensis CBS 421]
Length = 430
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 228/381 (59%), Gaps = 41/381 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQ L GGRG GHF+ G+KSG+H + ++ + ++M+G+ LITKQ+ G V+ V
Sbjct: 71 VVKAQALTGGRGKGHFNTGYKSGIHMIKSAEEAFQVSQEMLGNNLITKQSGSKGKKVSSV 130
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+ + N+ E+Y I+ DR P++I S GG +IE +A + P +K + + I
Sbjct: 131 FIVEKCNVLHESYLSILFDRQARLPLIIASRDGGMNIEEIAEEKPDSIKKFHVK-EEIIN 189
Query: 169 ESLAQDIADFLEF-QGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
+ LA +IA L F DL+ A T +Q
Sbjct: 190 DELAMEIAKSLGFTHTDLRETAKT----------------------------------IQ 215
Query: 228 KLWNLFLSVDATQLEINPLVETDERE-----VISVDAKINFDDNAEFRQKNIFSQNEVSE 282
L+ LF DATQ+EINP+ E ++ E V+ +DAK FDDNAEFRQ I+S ++++
Sbjct: 216 NLYKLFKDKDATQIEINPISEIEKHENGEYDVVCMDAKFGFDDNAEFRQHEIYSWRDITQ 275
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP EV+A KY LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG E+
Sbjct: 276 EDPNEVEAKKYELNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGDPANFLDCGGGATPET 335
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
I + F +I S+ V I VN+FGGIV C +A+GLV A K L IP++ RL+GTN+ EG
Sbjct: 336 IKKGFELILSNEKVDAIFVNIFGGIVRCDLVAEGLVAAAKDLNLKIPIIARLQGTNLDEG 395
Query: 403 KRILDESKLPLIFASDLDEAA 423
+ I+ ES + + +LD AA
Sbjct: 396 RAIIKESGVKIFSFDELDPAA 416
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LV A K L IP++ RL+GTN+ EG+ I+ ES + + +LD AA
Sbjct: 367 AEGLVAAAKDLNLKIPIIARLQGTNLDEGRAIIKESGVKIFSFDELDPAA 416
>gi|84515874|ref|ZP_01003235.1| succinyl-CoA synthetase subunit beta [Loktanella vestfoldensis
SKA53]
gi|84510316|gb|EAQ06772.1| succinyl-CoA synthetase subunit beta [Loktanella vestfoldensis
SKA53]
Length = 397
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 173/405 (42%), Positives = 238/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +L+ +V+KAQI AGGRG G F D G K GV +V++ +K
Sbjct: 29 EDAKTAAG---ELDGPLWVVKAQIHAGGRGKGKFKEADAGDKGGVRLCRSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + ++S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEDGSGIETEMYLALLVDRQTSRISFVVSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + F G ++
Sbjct: 146 VAAATPEKILSFSVDPATG-----------YQAFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A L G+ + T + +L+ F D LEINPL+ TD+ ++ +DAK++FD NA
Sbjct: 173 VAFTLGLTGNQIKQCVTLMGQLYKAFTEKDMEMLEINPLIVTDKGDLKVLDAKVSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I S + +E DP+E+ ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 MYRHGDIASLRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I+ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIIRNSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEKGKEIIRNSGLDVIAADDLKDGAQKIVKA 394
>gi|296282965|ref|ZP_06860963.1| succinyl-CoA synthetase subunit beta [Citromicrobium bathyomarinum
JL354]
Length = 399
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 165/384 (42%), Positives = 228/384 (59%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ +M+G+ L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKSIEEVEEAAREMLGNTLVTVQTGDAGKE 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y ++ DR ++ S GG DIE VA +TP + TI ID
Sbjct: 103 VNRLYVTDGVDIAKEYYLALLVDRASGEVAIVASTEGGMDIETVAHETPERITTITIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG F+ + +A L+ GDL +A
Sbjct: 163 QG---------------------------------FMPHHGRAVAFALKLEGDLNKQAQK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+ FL+ D LEINPLVET++ ++ +D K++FD NA +RQK + +V+E D
Sbjct: 190 LSKQLYEAFLAYDCAMLEINPLVETEDGNLLVLDTKMSFDSNAMYRQKEVEKLRDVTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
EV+AS+Y+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 EAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF++I D V+ ILVN+FGGI+ C IA G+V A K + +PLVVRLEGTNV++GK
Sbjct: 310 AAFKLILKDPAVEGILVNIFGGIMKCDVIADGIVAAAKEVNIQVPLVVRLEGTNVEKGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S L ++ A DL +AA + A
Sbjct: 370 ILANSGLAIVPADDLGDAAKKIVA 393
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K + +PLVVRLEGTNV++GK IL S L ++ A DL +AA +
Sbjct: 339 ADGIVAAAKEVNIQVPLVVRLEGTNVEKGKEILANSGLAIVPADDLGDAAKKIV 392
>gi|68071999|ref|XP_677913.1| ATP-specific succinyl-CoA synthetase beta subunit, [Plasmodium
berghei strain ANKA]
gi|56498203|emb|CAH97433.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
[Plasmodium berghei]
Length = 458
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 233/387 (60%), Gaps = 37/387 (9%)
Query: 38 NILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITK 96
NI D++ VIKAQIL+GGRGLG+F +N F+ GVH N +I + KM+ + L+TK
Sbjct: 85 NICGDIDL---VIKAQILSGGRGLGYFKENKFEGGVHICRNSMEIKDVASKMLNNTLVTK 141
Query: 97 QTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLV 156
QT G N V + + I +E Y + DR + ++ S GG+ IE+++ KTP +
Sbjct: 142 QTGPDGKKCNTVFICERFYIRKERYVAFLLDRNSDSICLLGSSVGGSSIEDISKKTPEAI 201
Query: 157 KTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRG 216
I I++ G+T+ +++ + + F+G+ E+ N+
Sbjct: 202 YKININIKDGLTDGQSREFCEQIGFKGN-------ELDIATNM----------------- 237
Query: 217 DLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFS 276
V L+ +F D T LEINPL ET++R V+ DAK+NFDDNAE+RQK IF
Sbjct: 238 ---------VVNLYKIFKKYDCTLLEINPLSETNDRRVLCCDAKLNFDDNAEYRQKEIFE 288
Query: 277 QNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGG 336
+ ++++ +P E++A KYNLNYV +DGNI C+VNGAGLAMAT+D+I LH G P+NFLDVGG
Sbjct: 289 KRDLTQENPEELEAKKYNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNFLDVGG 348
Query: 337 GVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEG 396
E I +A +II ++ K +N+ GGI+ C IA+G++NA K K PL++RLEG
Sbjct: 349 SATENEIAEALKIIDNNDKAKVCFINILGGIMRCDIIARGIINAAKQIKFKKPLIIRLEG 408
Query: 397 TNVQEGKRILDESKLPLIFASDLDEAA 423
TN +E +I++ESK+ I D++ AA
Sbjct: 409 TNEKEAIKIIEESKIKCIICQDMNLAA 435
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA K K PL++RLEGTN +E +I++ESK+ I D++ AA
Sbjct: 386 ARGIINAAKQIKFKKPLIIRLEGTNEKEAIKIIEESKIKCIICQDMNLAA 435
>gi|260431531|ref|ZP_05785502.1| succinyl-CoA synthetase beta chain [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415359|gb|EEX08618.1| succinyl-CoA synthetase beta chain [Silicibacter lacuscaerulensis
ITI-1157]
Length = 397
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 174/405 (42%), Positives = 239/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A+TA +L+ +V+KAQI AGGRG GHF D G K GV T +V++ +K
Sbjct: 29 EEAKTAAG---ELDGPLWVVKAQIHAGGRGKGHFKEPDAGDKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN+V + I RE Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPEGKQVNRVYIEAGSGIERELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + F G ++
Sbjct: 146 VAAATPEKILSFSVDPATG-----------YQPFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L G + + L+ F+ D LEINPL+ + ++ +DAK++FD NA
Sbjct: 173 IAFSLGLEGAQVKQCVRLMGILYKAFVEKDMEMLEINPLIVAEGGDLKVLDAKLSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHPDIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV++GK I++ S L +I A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIINSSGLDVIAADNLDDAAQKIVKAVKG 397
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEKGKEIINSSGLDVIAADNLDDAAQKIVKA 394
>gi|146103993|ref|XP_001469702.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
infantum JPCM5]
gi|398024528|ref|XP_003865425.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Leishmania
donovani]
gi|134074072|emb|CAM72814.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
infantum JPCM5]
gi|322503662|emb|CBZ38748.1| succinyl-CoA ligase [GDP-forming] beta-chain, putative [Leishmania
donovani]
Length = 413
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 226/376 (60%), Gaps = 34/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QILAGGRG G F +GF+ GVH ++ + M+G+ L+TKQT G VN +
Sbjct: 63 VVKSQILAGGRGKGVFKDGFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTL 122
Query: 109 MVAKSV-NITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V ++V I RE Y ++ DR P+ I S GG IE +A P +KT+ ++V +G+
Sbjct: 123 YVTEAVAGIKRELYLSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGV 182
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
A A L F G+ +AA +++ L+N+ S
Sbjct: 183 DHDAAVAYAKELGFAGETAERAAEQIKALYNIGKSK------------------------ 218
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
D T +EINP VE + +V+ +DAK++FDDNA FRQ+ IF+ + ++ D +E
Sbjct: 219 ---------DCTMVEINPFVELENGDVMEIDAKLSFDDNAAFRQRGIFALEDQTQIDSKE 269
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
V A K++LNY+ +DGN+GCLVNGAGLAMATMD I LHGG ANFLD GG +E I+ AF
Sbjct: 270 VLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDAGGSASEAQIVAAF 329
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II+ DSNVK ILVN+FGGI++C IA+G+VNA K+ +IP+VVRL GTN Q GK I+
Sbjct: 330 KIITGDSNVKSILVNIFGGIMHCDVIAQGVVNASKALNTTIPIVVRLCGTNEQRGKEIIR 389
Query: 408 ESKLPLIFASDLDEAA 423
S L + D D AA
Sbjct: 390 NSGLVIHPVEDFDSAA 405
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA K+ +IP+VVRL GTN Q GK I+ S L + D D AA
Sbjct: 356 AQGVVNASKALNTTIPIVVRLCGTNEQRGKEIIRNSGLVIHPVEDFDSAA 405
>gi|395764854|ref|ZP_10445474.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella sp.
DB5-6]
gi|395413671|gb|EJF80133.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella sp.
DB5-6]
Length = 398
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 234/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFD---NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F + K GV +V ++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELAHDAKGGVRLAKSVDEVVANVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRTVGRVAFVVSTEGGMDIETVAEETPEKILTLPIDAT 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+ + + D L+ Q A + +KL+ +
Sbjct: 163 QGVISADCARLCDALKLQD----SAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ +F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKVFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK+ L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHELAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I A DLD+AA + A
Sbjct: 370 IISDSGLNVIPADDLDDAAQKIVAA 394
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIISDSGLNVIPADDLDDAAQKIVAA 394
>gi|319899504|ref|YP_004159601.1| succinyl-CoA synthetase subunit beta [Bartonella clarridgeiae 73]
gi|319403472|emb|CBI77052.1| succinyl-CoA synthetase, beta chain [Bartonella clarridgeiae 73]
Length = 398
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/404 (42%), Positives = 243/404 (60%), Gaps = 36/404 (8%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFD---NGFKSGVHFTNNVQDIPPI 84
V + A +K L YV+K+QI AGGRG G F + K GV +V+++
Sbjct: 23 VAVYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFKELGSDSKGGVRLAKSVKEVITN 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+++M+G LITKQT G VN++ + +I +E Y ++ DR ++S GG D
Sbjct: 83 VKEMLGKTLITKQTGPEGKQVNRLYIENGADIEQELYLSLLVDRTIGQVAFVVSTEGGMD 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VA +TP + T+PID +G+T + + + D L+ L A + +KL+ +
Sbjct: 143 IEAVAEETPEKILTLPIDPTKGVTPTDCKKLCDALK----LCDSARKDGEKLFPI----- 193
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
L+ F D + LEINPL+ D + +DAK++FD
Sbjct: 194 ------------------------LYKAFCEKDMSLLEINPLIVMDNGHLRVLDAKVSFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
+NA FR +I ++SE DP+E++ASK++L YV +DG IGC+VNGAGLAMATMDIIKL+
Sbjct: 230 NNALFRHPDILELRDISEEDPKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
G EPANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G++ A K
Sbjct: 290 GAEPANFLDVGGGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVITAVKEV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 350 GLRVPLVVRLEGTNVEQGKAIISKSGLNVISADDLDDAAQKIVA 393
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVITAVKEVGLRVPLVVRLEGTNVEQGKAIISKSGLNVISADDLDDAAQKIVAA 394
>gi|254456078|ref|ZP_05069507.1| succinyl-CoA synthetase beta chain [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083080|gb|EDZ60506.1| succinyl-CoA synthetase beta chain [Candidatus Pelagibacter sp.
HTCC7211]
Length = 386
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 239/391 (61%), Gaps = 41/391 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN K+YV+KAQI AGGRG GV + ++D+ ++M+G L+T QT
Sbjct: 36 KSLNTKKYVLKAQIHAGGRGKA-------GGVKILDTIEDLSEAAKEMMGKILVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ V +S NI +E Y + DR + I S GG DIE VA+ P + T
Sbjct: 89 EGREVKRLYVEESSNIDKEFYLSCLVDRASSKIAFISSDQGGMDIEEVASNLPEKIITTK 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D+ I++ K E+ K++NL S+ K
Sbjct: 149 VDIGNEISD------------------KDCEEIIKIFNLNDSA---------------KI 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+A + ++ ++ +F+S DA +E+NPL+ T E +VI +DAK+NFD NA FR I ++
Sbjct: 176 QAISLIKSIYQMFISTDANMVEVNPLILTKEEKVICLDAKVNFDSNALFRHPEIVELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E DP E++ASK++L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++
Sbjct: 236 NEEDPTEIEASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGKEPANFLDVGGGASK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + A +II SD NVK IL+N+FGGI+ C +A+G+V+A K +S+PLVVRL GTN +
Sbjct: 296 EKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLAGTNFK 355
Query: 401 EGKRILDESKLPLIFASDLDEAA-SLVNACK 430
EGK ILD S L LI A +LD+AA +V A K
Sbjct: 356 EGKEILDNSGLKLISAENLDDAAKKIVEAIK 386
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K +S+PLVVRL GTN +EGK ILD S L LI A +LD+AA + A
Sbjct: 329 AQGVVDAAKEINISVPLVVRLAGTNFKEGKEILDNSGLKLISAENLDDAAKKIVEA 384
>gi|283782078|ref|YP_003372833.1| succinyl-CoA synthetase subunit beta [Pirellula staleyi DSM 6068]
gi|283440531|gb|ADB18973.1| succinyl-CoA synthetase, beta subunit [Pirellula staleyi DSM 6068]
Length = 396
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 232/385 (60%), Gaps = 35/385 (9%)
Query: 49 VIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
V+KAQI AGGRG G +N + GV + ++ + +IG L+T QT + G VN+
Sbjct: 44 VVKAQIHAGGRGKGTTKENSAQRGVQLVKSAEEAATVARNLIGKTLVTIQTGEEGKVVNQ 103
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V V + I RE Y IV DR PV+++S GG +IE VA TP + D H G+
Sbjct: 104 VFVEEGCKIARELYLGIVLDRAAAKPVLMVSTEGGVEIETVAHDTPEKIFKEHFDPHVGL 163
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
L +Q V+KL L L +G A A ++
Sbjct: 164 -----------LPYQ----------VRKLCVL------------LGIKGASVASADKFMR 190
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L L++ +D +EINPLV T+ +++++DAK+ FDDNA FR K++ +++E DP E
Sbjct: 191 ALCKLWVQLDCAMVEINPLVITEAGDLVALDAKVAFDDNAMFRHKDLAELRDLTEEDPAE 250
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
V AS L+YV +DGNIGCLVNGAGLAM+TMDIIKLHGGEPANFLDVGGG NE + +AF
Sbjct: 251 VRASNTGLSYVKLDGNIGCLVNGAGLAMSTMDIIKLHGGEPANFLDVGGGANEAQVTEAF 310
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
RII SD NVK ILVN+FGGI C TIA +V A K+ ++PLVVRLEGT V+EGK+IL
Sbjct: 311 RIILSDKNVKGILVNIFGGIARCTTIASAIVAASKAVGFNVPLVVRLEGTEVEEGKKILR 370
Query: 408 ESKLPLIFASDLDEAA-SLVNACKS 431
ES + LI A L +AA +V A K+
Sbjct: 371 ESGVKLIAADGLTDAAIKIVEAAKN 395
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+++V A K+ ++PLVVRLEGT V+EGK+IL ES + LI A L +AA
Sbjct: 337 ASAIVAASKAVGFNVPLVVRLEGTEVEEGKKILRESGVKLIAADGLTDAA 386
>gi|402823091|ref|ZP_10872531.1| succinyl-CoA synthetase subunit beta [Sphingomonas sp. LH128]
gi|402263349|gb|EJU13272.1| succinyl-CoA synthetase subunit beta [Sphingomonas sp. LH128]
Length = 399
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 235/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ ++M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELPADAKGGVRLAKSIEEVEAFAKEMLGNTLVTIQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y ++ DR +I+S GG DIE VA TP + TI ID
Sbjct: 103 VNRLYVTDGVDIDKEYYLSMLVDRKTGRVAMIVSTEGGMDIEEVAHNTPEKITTITIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G + +A L+ GDL +A QK+A
Sbjct: 163 EGFQAHHGRAVAFALKLSGDLNKQA----------------QKLA--------------- 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+ F+++D +EINPLVE+ E++ +D K++FD NA R +IF+ + +E D
Sbjct: 192 --KQLYTAFIAMDCDMVEINPLVESKGGELLVLDTKMSFDSNALARHPDIFALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PAEIEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II +D VK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILADPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLQVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S L ++ A+DL +AA + A
Sbjct: 370 ILANSGLAIVPANDLGDAAKKIVA 393
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNVQ+GK IL S L ++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLQVPLVVRLEGTNVQQGKDILANSGLAIVPANDLGDAAKKIV 392
>gi|296532581|ref|ZP_06895286.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC
49957]
gi|296267072|gb|EFH12992.1| succinate--CoA ligase (ADP-forming) [Roseomonas cervicalis ATCC
49957]
Length = 398
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/387 (44%), Positives = 232/387 (59%), Gaps = 36/387 (9%)
Query: 48 YVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
YV+K+QI AGGRG G F D K GV +V D+ E MIG L+TKQT G V
Sbjct: 43 YVVKSQIHAGGRGAGRFKEDPNGKGGVRVVKSVDDVKAAAEAMIGKTLVTKQTGPAGKVV 102
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
++V V +I RE Y ++ DR + V++ S GG +IE VA P + +D
Sbjct: 103 SRVYVEDGCDIKRELYLSLLVDRDSSRIVIMASTEGGMEIEEVAEHNPEKILKAVVDPAS 162
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G++ + +A L +G +++A F +F
Sbjct: 163 GVSGFHCRKLAFGLGLEG----------------------KQVASFTKF----------- 189
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
V ++ F+ +D +EINPLV T E++++DAK++FDDNA FR K++ + + SE DP
Sbjct: 190 VTAMYKAFVELDCAIVEINPLVVTGAGEIVALDAKVSFDDNALFRHKDLEALRDDSEMDP 249
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
+E++A K++LNYV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGG E + +
Sbjct: 250 KELEAVKHDLNYVALDGEIGCMVNGAGLAMATMDIIKLYGSSPANFLDVGGTATAERVTE 309
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AFRII+SDSNVK ILVN+FGGI C IA G+V A K+ LS+PLVVRLEGTNV GK+I
Sbjct: 310 AFRIITSDSNVKAILVNIFGGIAKCDMIANGIVVAAKNLTLSVPLVVRLEGTNVDLGKKI 369
Query: 406 LDESKLPLIFASDL-DEAASLVNACKS 431
L ES L +I A +L D A +V A K
Sbjct: 370 LAESGLAIIPADNLADAAEKVVRAVKG 396
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K+ LS+PLVVRLEGTNV GK+IL ES L +I A +L +AA + A
Sbjct: 338 ANGIVVAAKNLTLSVPLVVRLEGTNVDLGKKILAESGLAIIPADNLADAAEKVVRA 393
>gi|319407858|emb|CBI81511.1| succinyl-CoA synthetase, beta chain [Bartonella sp. 1-1C]
Length = 398
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 242/405 (59%), Gaps = 36/405 (8%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPI 84
V + A N +K L YV+K+QI AGGRG G F + K GV +V+++
Sbjct: 23 VAIYSVEQAENWVKKLPGPLYVVKSQIHAGGRGKGKFKELSSDSKGGVRLAKSVEEVITN 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+++M+G LITKQT G VN++ + +I RE Y ++ DR ++S GG D
Sbjct: 83 VKEMLGKTLITKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRTIGQVSFVVSTEGGMD 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VA +TP + T+PID +G+T S + D L+ L A + +KL+ +
Sbjct: 143 IETVAEETPEKIFTLPIDPTKGVTPSDCTKLCDSLK----LCDSAREDGEKLFPI----- 193
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
L+ F D + LEINPL+ + + +DAK++FD
Sbjct: 194 ------------------------LYKAFYEKDMSLLEINPLIVMNNGRLRVLDAKVSFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
+NA +R +I ++SE D +E++ASK++L YV +DG IGC+VNGAGLAMATMDIIKL+
Sbjct: 230 NNALYRHPDILELRDISEEDSKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
G EPANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G++ A K
Sbjct: 290 GAEPANFLDVGGGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA + A
Sbjct: 350 GLKVPLVVRLEGTNVEQGKAIISESGLNVISADDLDDAAQKIVAA 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEQGKAIISESGLNVISADDLDDAAQKIVAA 394
>gi|395778879|ref|ZP_10459390.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
elizabethae Re6043vi]
gi|423714727|ref|ZP_17688951.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
elizabethae F9251]
gi|395417054|gb|EJF83406.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
elizabethae Re6043vi]
gi|395430946|gb|EJF96974.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
elizabethae F9251]
Length = 398
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 237/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFD---NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F + K GV ++V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGSDAKGGVRLAHSVEEVVANVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDAT 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + D L L+ A + +KL+ +
Sbjct: 163 QGVTSADCARLCDAL----GLRDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I A DLD+AA + A
Sbjct: 370 IIKDSGLNVIPADDLDDAAQKIVAA 394
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIIKDSGLNVIPADDLDDAAQKIVAA 394
>gi|156546288|ref|XP_001605967.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Nasonia vitripennis]
Length = 449
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/384 (41%), Positives = 236/384 (61%), Gaps = 35/384 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I ++L+ K+ V+KAQ+LAGGRG G F SGV ++ + KM+G L+T
Sbjct: 65 AAEIARELDSKDLVLKAQVLAGGRGKGKFSGSNVSGVVMCETPEEAKELASKMLGKYLVT 124
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+VM+ + +E Y ++ +R +GPV+I S GG +IE++AA P
Sbjct: 125 KQTGEVGRICNEVMITTRMFTRKELYLSVMMERSFDGPVIIASSEGGVNIEDIAATNPEA 184
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ P+D+ +G+T A IA GD + LS +
Sbjct: 185 ISYTPVDIRKGLTCEQADAIACRFGV-GDPRV-------------LSEI----------- 219
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
V L+ LF+ DA LEINPLV+ + ++D K NFDD+A FRQK++F
Sbjct: 220 ----------VCNLYELFIEKDALLLEINPLVQDICGQYFALDCKCNFDDSASFRQKDLF 269
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + S+ +P EV A K LNY+ +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVG
Sbjct: 270 ALQDWSQKNPMEVKADKIGLNYIALDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 329
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +++ +AF+IISSD V+ I VN+FGGI+ C IA+G++ A + KL++P++VRL+
Sbjct: 330 GGASVKTVTEAFKIISSDPKVESIFVNIFGGIIRCDVIAEGIIAAFQDLKLNVPVIVRLQ 389
Query: 396 GTNVQEGKRILDESKLPLIFASDL 419
GTN ++GK+++ ++KL +I D+
Sbjct: 390 GTNAEKGKKLIMDAKLKIIPIDDM 413
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 34/46 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 515
A ++ A + KL++P++VRL+GTN ++GK+++ ++KL +I D+
Sbjct: 368 AEGIIAAFQDLKLNVPVIVRLQGTNAEKGKKLIMDAKLKIIPIDDM 413
>gi|414176646|ref|ZP_11430875.1| succinyl-CoA ligase [ADP-forming] subunit beta [Afipia broomeae
ATCC 49717]
gi|410886799|gb|EKS34611.1| succinyl-CoA ligase [ADP-forming] subunit beta [Afipia broomeae
ATCC 49717]
Length = 398
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 239/388 (61%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV +V ++ ++M+G L+T QT +G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVDEVKEFSQQMLGATLVTIQTGPSGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y ++ DR + ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYLEDGSDIEKEFYLSLLVDRETSRVAFVVSTEGGMDIEKVAHDTPDKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A L +GDL A + +KL
Sbjct: 163 TGIMGHHGRTVAQALGLKGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V +L+ FL+ D LEINPL+ + + E+ +DAK++FD N+ +R +I + + +E D
Sbjct: 191 -VVQLYTAFLAKDMEMLEINPLIVSKQGELKCLDAKMSFDSNSLYRHPDIVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G PANFLDVGGG +EE +
Sbjct: 250 AKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGGASEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIARGVIAAVKTVGLQVPLVVRLEGTNVEEGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I++ES L ++ A+DLD+AA +VNA K
Sbjct: 370 IINESGLNVLSANDLDDAAQKIVNAVKG 397
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K+ L +PLVVRLEGTNV+EGK+I++ES L ++ A+DLD+AA +
Sbjct: 339 ARGVIAAVKTVGLQVPLVVRLEGTNVEEGKKIINESGLNVLSANDLDDAAQKIV 392
>gi|288959417|ref|YP_003449758.1| succinyl-CoA synthetase subunit beta [Azospirillum sp. B510]
gi|288911725|dbj|BAI73214.1| succinyl-CoA synthetase beta chain [Azospirillum sp. B510]
Length = 398
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/400 (42%), Positives = 238/400 (59%), Gaps = 36/400 (9%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIGH 91
+ A + ++L +V+K+QI AGGRG G F + K GV +++D+ +M+ H
Sbjct: 29 QEAETVARELGGPVWVVKSQIHAGGRGAGRFKDNPEGKGGVRVVKSIEDVGKNAAEMLNH 88
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
L+TKQT G V ++ V + +I RE Y ++ DR ++ S GG +IE VA
Sbjct: 89 VLVTKQTGAEGREVKRLYVEEGADIKRELYLGMLIDRATGRVTIMASTEGGMEIEEVAHN 148
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP + + +D GI QG +K+A
Sbjct: 149 TPEKIIKVAVDPATGI--------------QG-------------------YHTRKVAFA 175
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
L G AA +Q + F+ +D +EINPL+ T +++++DAK+NFDDNA FR
Sbjct: 176 LGLEGKQVGAAAKFIQAAYQAFIDLDCAIVEINPLIVTGSGDILALDAKMNFDDNALFRH 235
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K++ + +E DP E++A+K++LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANF
Sbjct: 236 KDVEELRDEAEEDPAEIEAAKHSLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANF 295
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG +E + AF++I SDSNV+ ILVN+FGGI+ C IA+G+V A + L +PLV
Sbjct: 296 LDVGGGATKERVTAAFKLILSDSNVEGILVNIFGGIMRCDVIAEGVVAAAREVHLHVPLV 355
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
VRLEGTNV GK+IL ES LP++ A +L D A +V A K
Sbjct: 356 VRLEGTNVDLGKKILAESGLPILSADNLADAAEKVVKAVK 395
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV GK+IL ES LP++ A +L +AA + A
Sbjct: 338 AEGVVAAAREVHLHVPLVVRLEGTNVDLGKKILAESGLPILSADNLADAAEKVVKA 393
>gi|66548265|ref|XP_624365.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Apis mellifera]
Length = 449
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/388 (40%), Positives = 234/388 (60%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I +LN K+ V+KAQ+LAGGRG+GHF + GV + ++ + MIG LIT
Sbjct: 65 AEKIAANLNTKDIVLKAQVLAGGRGIGHFKDTNVRGVVMCESPKEAKTVASSMIGKLLIT 124
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VMV + +E Y ++ + +GPV+I+S GG +IE++AA +P
Sbjct: 125 KQTGPAGKICNSVMVTTRMFPRKEYYISVMLETTFDGPVIIVSKQGGVNIEDIAATSPEA 184
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +G+T I D L +G E +KL ++ + +L
Sbjct: 185 ISYTPIDIMKGLTLEQINKIVDNLGLEG--------ESKKLTSIIICNL----------- 225
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ LF+ DA LEINP E ++D K +FDD+AEFRQK +F
Sbjct: 226 --------------YELFIEKDALLLEINPFALDICEEYFALDCKCSFDDSAEFRQKELF 271
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++S+ DP E+ A+K+NLNY+ +DGNIGCLVNGAGLAMATMD+IK++GG PANFLDVG
Sbjct: 272 NLQDISQIDPSELHATKFNLNYIHLDGNIGCLVNGAGLAMATMDVIKMNGGFPANFLDVG 331
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G +E++ + F+II SD NV+ I VN+FGGI+ C IA+G++ A K ++ +P+VVRL+
Sbjct: 332 GSATKEAVTEGFKIILSDPNVEAIFVNIFGGIMRCDIIAQGIIAASKELQIKVPIVVRLQ 391
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT V+E +++ +++L + D AA
Sbjct: 392 GTRVKEANQLIKDAQLKVFVEEDFSTAA 419
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K ++ +P+VVRL+GT V+E +++ +++L + D AA
Sbjct: 370 AQGIIAASKELQIKVPIVVRLQGTRVKEANQLIKDAQLKVFVEEDFSTAA 419
>gi|341613296|ref|ZP_08700165.1| succinyl-CoA synthetase subunit beta [Citromicrobium sp. JLT1363]
Length = 399
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 236/388 (60%), Gaps = 40/388 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHF-----DNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
K+L YV+KAQI AGGRG G F D G GV +++++ +M+G+ L+T
Sbjct: 36 KELPGPLYVVKAQIHAGGRGKGKFKELGPDAG--GGVRLAKSIEEVESSAREMLGNTLVT 93
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G VN++ V V+I +E Y ++ DR ++ S GG DIE VA +TP
Sbjct: 94 VQTGDAGKEVNRLYVTDGVDIAKEYYLALLVDRASGQVAMVASTEGGMDIETVAHETPER 153
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ TI ID QG +++A L+ +GDL + AQK+A
Sbjct: 154 ITTITIDPAQGFMPHHGREVAFALKLEGDLNKQ----------------AQKLA------ 191
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++L+ F++ D LEINPLVET++ ++ +D K++FD NA +R K++
Sbjct: 192 -----------KQLYEAFIAYDCAMLEINPLVETEDGNLLVLDTKMSFDSNAMYRHKDVE 240
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ +V+E D EV+AS+Y+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVG
Sbjct: 241 ALRDVTEEDEAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG 300
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG N+E + AF++I D V+ ILVN+FGGI+ C IA+G+V A K + +PLVVRLE
Sbjct: 301 GGANKEKVTAAFKLILKDPAVEGILVNIFGGIMKCDVIAEGIVAAAKEVNIQVPLVVRLE 360
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV++GK IL S L ++ A DL +AA
Sbjct: 361 GTNVEKGKEILANSGLAIVPADDLGDAA 388
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K + +PLVVRLEGTNV++GK IL S L ++ A DL +AA +
Sbjct: 339 AEGIVAAAKEVNIQVPLVVRLEGTNVEKGKEILANSGLAIVPADDLGDAARKIV 392
>gi|49476305|ref|YP_034346.1| succinyl-CoA synthetase subunit beta [Bartonella henselae str.
Houston-1]
gi|81647476|sp|Q6G1M1.1|SUCC_BARHE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|49239113|emb|CAF28417.1| Succinyl-CoA synthetase beta chain [Bartonella henselae str.
Houston-1]
Length = 398
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/385 (43%), Positives = 234/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F D K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELDPDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PI+
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRNVGRVAFVVSTEGGMDIETVAEETPEKILTLPINST 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T S + D L DL A + +KL+ +
Sbjct: 163 QGVTSSDCARLCDAL----DLHDSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + +DAK++FD+NA FR +I + SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMTNGHLRVLDAKVSFDNNALFRHPDILELRDTSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ +S L +I A DLD+AA + A
Sbjct: 370 IISDSGLNVIPADDLDDAAQKIVAA 394
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIISDSGLNVIPADDLDDAAQKIVAA 394
>gi|150398140|ref|YP_001328607.1| succinyl-CoA synthetase subunit beta [Sinorhizobium medicae WSM419]
gi|189030213|sp|A6UDP2.1|SUCC_SINMW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|150029655|gb|ABR61772.1| succinyl-CoA synthetase, beta subunit [Sinorhizobium medicae
WSM419]
Length = 398
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 234/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV + ++ +M+G+ L+TKQT +G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPD 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + + + L+ G+ +A A +KL+ +
Sbjct: 163 KGVTADDLKTLTEALKLDGEARADA----EKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
QAF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 QAFKIITADPAVKGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|294676277|ref|YP_003576892.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Rhodobacter
capsulatus SB 1003]
gi|294475097|gb|ADE84485.1| succinyl-CoA synthetase (ADP-forming), beta subunit [Rhodobacter
capsulatus SB 1003]
Length = 397
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 238/388 (61%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+KAQI AGGRG GHF + G K GV +V + + +M+G L+T QT G
Sbjct: 43 WVVKAQIHAGGRGKGHFKEAEAGEKGGVRLARSVAEAETLARQMLGRTLVTHQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I+RE Y ++ DR + + S GG DIE VAA TP + + +D
Sbjct: 103 VNRIYIEEGSDISRELYLALLIDRKSSRVSFVCSTEGGMDIEEVAAHTPEKILSFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+++ + IA L +G+ +V++ +L
Sbjct: 163 TGLSDFHGRRIAFALGLEGN-------QVKQCVSL------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++KL+ FL D LEINPL+ T + ++ +DAK+ FD+NA +RQ ++ +V+E D
Sbjct: 191 -IKKLYKAFLEKDMEMLEINPLIVTTDGQLKVLDAKLGFDNNALYRQPDVMDLRDVTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++AS+++LNY+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +E +
Sbjct: 250 PKELEASRFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
+AF+II+SD VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK
Sbjct: 310 EAFKIITSDPKVKGILVNIFGGIMRCDIIAEGVLAAVKEVGLKVPLVVRLEGTNVELGKD 369
Query: 405 ILDESKLPLIFASDL-DEAASLVNACKS 431
I+ +S L +I A DL D A +V A K
Sbjct: 370 IIAKSGLNVIAADDLADGAKKIVAAVKG 397
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK I+ +S L +I A DL + A + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKDIIAKSGLNVIAADDLADGAKKIVAA 394
>gi|83313057|ref|YP_423321.1| succinyl-CoA synthetase [Magnetospirillum magneticum AMB-1]
gi|123540678|sp|Q2W063.1|SUCC_MAGMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|82947898|dbj|BAE52762.1| Succinyl-CoA synthetase [Magnetospirillum magneticum AMB-1]
Length = 398
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 239/393 (60%), Gaps = 35/393 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDN--GFKSGVHFTNNVQDIPPILEKMIGHKL 93
A + KDL +V+K+QI AGGRG G F N K GV +V+++ +++M+G L
Sbjct: 31 AVQVAKDLGGPVWVVKSQIHAGGRGAGRFKNDPNGKGGVRVAKSVEEVKTNVDQMLGQVL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
ITKQT G V +V + + +I RE Y ++ DR ++ S GG +IE VA P
Sbjct: 91 ITKQTGPAGKEVKRVYIEQGCDIKRELYLSMLVDRATCRVTIVASTEGGMEIEEVAHNHP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + ID +G + + IA L +G +++ ++
Sbjct: 151 EKILKVAIDPVEGFQQYHGRQIAFGLGLEG----------------------KQVNTCVK 188
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
F G L+ F+ +D + +EINPLV T E+I++DAK+NFDDNA FR K+
Sbjct: 189 FVG-----------ALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRHKD 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I + SE DP E++A++++LNY+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLD
Sbjct: 238 IEELRDESEEDPAELEAARHSLNYIKLDGQIGCMVNGAGLAMATMDIIKLYGAEPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF++I SD NV+ ILVN+FGGI+ C IA+G+V A + L++PLVVR
Sbjct: 298 VGGGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
LEGTNV+ GK+I+ +S LP+I A +L +AA V
Sbjct: 358 LEGTNVELGKKIMAQSGLPIIAADNLADAAEKV 390
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L++PLVVRLEGTNV+ GK+I+ +S LP+I A +L +AA + A
Sbjct: 338 AEGVVAAAREVSLNVPLVVRLEGTNVELGKKIMAQSGLPIIAADNLADAAEKVVKA 393
>gi|398830659|ref|ZP_10588840.1| succinyl-CoA synthetase, beta subunit [Phyllobacterium sp. YR531]
gi|398213239|gb|EJM99832.1| succinyl-CoA synthetase, beta subunit [Phyllobacterium sp. YR531]
Length = 398
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 233/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV + +V+++ ++M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLSRSVEEVVANAKEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRAVGRPAFVVSTEGGMDIEAVAHDTPEKIITVAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T A DIA KI+D G+ +A
Sbjct: 163 KGVT---ADDIA------------------------------KISDAYGLTGEARADGEK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LE+NPL+ + + +DAK++FD NA FR ++ + +E D
Sbjct: 190 LFPILYKAFTEKDMSLLEVNPLIVMKDGRLRVLDAKVSFDGNALFRHADVVELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK IL+N+FGGI+ C IA+G++ A K L +PLVVRLEGTN + GK+
Sbjct: 310 AAFKIITADPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLKVPLVVRLEGTNAELGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I++ES L ++ A DLD+AA +V A K
Sbjct: 370 IINESGLNVVSADDLDDAAQKIVKAVKG 397
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTN + GK+I++ES L ++ A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNAELGKKIINESGLNVVSADDLDDAAQKIVKA 394
>gi|406705614|ref|YP_006755967.1| succinyl-CoA synthetase subunit beta [alpha proteobacterium HIMB5]
gi|406651390|gb|AFS46790.1| succinyl-CoA synthetase (ADP-forming) beta subunit [alpha
proteobacterium HIMB5]
Length = 386
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 239/391 (61%), Gaps = 41/391 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+L K+YV+KAQI AGGRG GV +++Q++ ++ G L+T QT
Sbjct: 36 KNLETKKYVLKAQIHAGGRGKA-------GGVKILDSLQELEKAANELFGKTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ + +S I +E Y + DR + I S GG DIE VA+KTP + T
Sbjct: 89 EGREVKRLYIEESSEIDKEFYLSCLVDRASSKIAFISSDQGGMDIEEVASKTPEKIITTK 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D F D+ K E+ K+++L S+ Q I
Sbjct: 149 VD------------------FNDDISDKDCEEIIKIFDLKDSAQNQGI------------ 178
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+ ++ ++ +F++ DA +EINPL+ T + ++I +DAK+NFDDNA FR I ++
Sbjct: 179 ---SLIKAIYKMFVNTDANMVEINPLILTKDNKIICLDAKVNFDDNALFRHPEILELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E DP E++ASK+ L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++
Sbjct: 236 NEEDPTEIEASKHELAYIKLDGSIGCMVNGAGLAMATMDIIKLYGKEPANFLDVGGGASK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + AF+II SD NVK IL+N+FGGI+ C +A+G+V+A K +S+PLVVRL GTN +
Sbjct: 296 EKVAAAFKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLAGTNFK 355
Query: 401 EGKRILDESKLPLIFASDLDEAA-SLVNACK 430
EGK ILD S L +I A+DLD+AA +V A K
Sbjct: 356 EGKEILDSSGLKIISANDLDDAAKKIVEAIK 386
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K +S+PLVVRL GTN +EGK ILD S L +I A+DLD+AA + A
Sbjct: 329 AQGVVDAAKEINISVPLVVRLAGTNFKEGKEILDSSGLKIISANDLDDAAKKIVEA 384
>gi|158425639|ref|YP_001526931.1| succinyl-CoA synthetase subunit beta [Azorhizobium caulinodans ORS
571]
gi|158332528|dbj|BAF90013.1| succinyl-CoA synthetase beta subunit [Azorhizobium caulinodans ORS
571]
Length = 400
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 235/392 (59%), Gaps = 36/392 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQ 97
++L +V+K+QI AGGRG G F + G K GV +V+++ +E+M+G+ L+T Q
Sbjct: 36 RELGGPLWVVKSQIHAGGRGKGKFKEPEAGDKGGVRLARSVEEVKTFVEQMLGNTLVTVQ 95
Query: 98 TPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVK 157
T G VN++ + + +I E Y ++ DR + ++S GG DIE VA TP +
Sbjct: 96 TGPAGKQVNRLYIEEGSDIETEFYLSLLVDRSTSRVSFVVSTEGGMDIEEVAHSTPEKIV 155
Query: 158 TIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD 217
+ +D GI F G +K+AD L GD
Sbjct: 156 SFSVDPASGIQA-----------FHG----------------------RKVADALGLSGD 182
Query: 218 LKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQ 277
L +A + L+ F D LEINPL+ T + ++ +DAK+ FD NA FR ++ +
Sbjct: 183 LAKQAGKLTEVLYTAFTDTDMAMLEINPLIVTKDAKLKVLDAKVTFDSNALFRHPDLLAL 242
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
+ +E D +E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G PANFLDVGGG
Sbjct: 243 RDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGG 302
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
+EE + AF+II+SD NVK ILVN+FGGI+ C IA+G++ A + L +PLVVRLEGT
Sbjct: 303 ASEEKVTAAFKIITSDPNVKGILVNIFGGIMKCDVIARGVLAAVTAVGLKVPLVVRLEGT 362
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
NV++GK+I+ +S L +I A DLD+AA + A
Sbjct: 363 NVEQGKQIIRDSGLNVIPADDLDDAAQKIVAA 394
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + L +PLVVRLEGTNV++GK+I+ +S L +I A DLD+AA + A
Sbjct: 339 ARGVLAAVTAVGLKVPLVVRLEGTNVEQGKQIIRDSGLNVIPADDLDDAAQKIVAA 394
>gi|254584448|ref|XP_002497792.1| ZYRO0F13596p [Zygosaccharomyces rouxii]
gi|238940685|emb|CAR28859.1| ZYRO0F13596p [Zygosaccharomyces rouxii]
Length = 427
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 236/396 (59%), Gaps = 36/396 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
++A A I ++L + V+KAQ L GGRG GHFD+G +SG+H + + + +M+
Sbjct: 50 DNASDALKIAQNLKSDKLVVKAQALTGGRGKGHFDSGLQSGIHIISKPEQAQDLASQMLK 109
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
H+LITKQ+ + G V+ V V + VN E+Y I+ DR ++I S GG +IE VA
Sbjct: 110 HRLITKQSGEKGKPVSAVYVVECVNAAHESYLSILMDRSTKKILIICSSEGGMNIEEVAK 169
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P +K I +GITE A+ ++
Sbjct: 170 SNPDAIKKFYITPSEGITEETAR---------------------------------QVGA 196
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET---DEREVISVDAKINFDDNA 267
L F + +A+AA V KL+ ++ DATQ+EINPL E +V+ +DAK FDDNA
Sbjct: 197 SLGFSKEAEAEAADAVTKLYKIYTERDATQIEINPLSEVIGDANHKVMCMDAKFGFDDNA 256
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FRQ+ ++S +VS+ DP EV A + +LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+
Sbjct: 257 SFRQQEVYSWRDVSQEDPDEVLAKQSDLNFVKLQGNIGCLVNGAGLAMATMDVIKLYGGD 316
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLD GGG E+I +AF +I S+ V I VN+FGGIV C +A+GLVNA K +
Sbjct: 317 PANFLDCGGGATPETIKKAFELILSNKKVDAIFVNIFGGIVRCDYVAEGLVNAAKELGVD 376
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+P++ RL+GTN++EG+ I+++S + +LD AA
Sbjct: 377 VPIIARLQGTNLEEGQAIIEKSGFKIFSFEELDPAA 412
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LVNA K + +P++ RL+GTN++EG+ I+++S + +LD AA
Sbjct: 363 AEGLVNAAKELGVDVPIIARLQGTNLEEGQAIIEKSGFKIFSFEELDPAA 412
>gi|240851388|ref|YP_002972791.1| succinyl-CoA synthetase subunit beta [Bartonella grahamii as4aup]
gi|240268511|gb|ACS52099.1| succinyl-CoA synthetase subunit beta [Bartonella grahamii as4aup]
Length = 398
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 236/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVEEVVANVQEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDAV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + D L+ Q + A + +KL+ +
Sbjct: 163 EGVTSVDCARLCDALKLQ----SSAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGRLRVLDAKVSFDNNALFRHPDILELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A +LD+AA + A
Sbjct: 370 IINESSLNVIPADNLDDAAQKIVAA 394
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I++ES L +I A +LD+AA + A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIINESSLNVIPADNLDDAAQKIVAA 394
>gi|398355387|ref|YP_006400851.1| succinyl-CoA ligase subunit beta [Sinorhizobium fredii USDA 257]
gi|390130713|gb|AFL54094.1| succinyl-CoA ligase [ADP-forming] subunit beta [Sinorhizobium
fredii USDA 257]
Length = 398
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 236/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V ++ + M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID +
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPN 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + +AD L+ +G+ +A A +KL+ +
Sbjct: 163 KGVTADDLKALADALKLEGEARADA----EKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFVEKDMSLLEVNPLIVMKNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 HAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|56552377|ref|YP_163216.1| succinyl-CoA synthetase subunit beta [Zymomonas mobilis subsp.
mobilis ZM4]
gi|260753943|ref|YP_003226836.1| succinyl-CoA synthetase subunit beta [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|384412537|ref|YP_005621902.1| succinyl-CoA synthetase subunit beta [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|81354789|sp|Q5NMF5.1|SUCC_ZYMMO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|56543951|gb|AAV90105.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258553306|gb|ACV76252.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|335932911|gb|AEH63451.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 398
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/415 (41%), Positives = 239/415 (57%), Gaps = 38/415 (9%)
Query: 17 KPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFK--SGVHF 74
+ VS V +E+A A + L+ YVIK+QILAGGRG G+F K GV
Sbjct: 15 RGVSVVPGYMAANVEEAVKAA---EQLSSPPYVIKSQILAGGRGKGYFRESPKEGGGVRL 71
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
+++ + E M+G L+T QT GI V K+++ ++V+I RE Y ++ DR
Sbjct: 72 VSDIAAVKKQAESMLGRHLVTAQTDDQGIPVEKLLITEAVSIAREFYLSLLVDRQTGRVT 131
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
+ SP GG DIE VA + P + I ID G + I L GD+
Sbjct: 132 FVASPEGGMDIETVAKEKPEAIHRIAIDPATGFQPHHGRMIGFALGLSGDV--------- 182
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
F+ +K A+ L+ F + D + LEINPLVET++ ++
Sbjct: 183 -------------------FKQGIKLAAS-----LYKAFTTSDMSLLEINPLVETNDGKL 218
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+ VDAKI+FDDNA FR +I + E SDP E +A + L+Y+ +DG+IGC+VNGAGLA
Sbjct: 219 LPVDAKISFDDNALFRHPDIAALGEAGASDPLEQEARQAGLSYIKLDGSIGCMVNGAGLA 278
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
M TMDII+LHG PANFLDVGGG ++E + AFRII SD +VK ILVN+FGGI+ C +A
Sbjct: 279 MGTMDIIQLHGEMPANFLDVGGGASKEKVAAAFRIILSDPSVKGILVNIFGGIMRCDILA 338
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
+G++ A + +++PLVVRLEG NV EGK L S LP+I ASDL +AA + A
Sbjct: 339 EGIIAAARELDITVPLVVRLEGNNVNEGKAALVSSGLPIITASDLGDAAQKIVAA 393
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + +++PLVVRLEG NV EGK L S LP+I ASDL +AA + A
Sbjct: 338 AEGIIAAARELDITVPLVVRLEGNNVNEGKAALVSSGLPIITASDLGDAAQKIVAA 393
>gi|23014368|ref|ZP_00054188.1| COG0045: Succinyl-CoA synthetase, beta subunit [Magnetospirillum
magnetotacticum MS-1]
Length = 398
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 238/393 (60%), Gaps = 35/393 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDN--GFKSGVHFTNNVQDIPPILEKMIGHKL 93
A + KDL YV+K+QI AGGRG G F N K GV ++ ++ +++M+G L
Sbjct: 31 AVQVAKDLGGPIYVVKSQIHAGGRGAGRFKNDPNGKGGVRVVKSIDEVRANVDQMLGQVL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
ITKQT G V +V + + +I RE Y ++ DR ++ S GG +IE VA P
Sbjct: 91 ITKQTGPAGKEVKRVYIEQGCDIKRELYLSMLVDRATCRVTIVASTEGGMEIEEVAHNHP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + ID +G + + IA L +G +++ ++
Sbjct: 151 EKILKVAIDPVEGFQQYHGRKIAFSLGLEG----------------------KQVNTCVK 188
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
F G L+ F+ +D + +EINPLV T E+I++DAK+NFDDNA FR K+
Sbjct: 189 FVG-----------ALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRHKD 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I + SE DP E++A++++LNY+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLD
Sbjct: 238 IEELRDESEEDPAELEAARHSLNYIKLDGQIGCMVNGAGLAMATMDIIKLYGSEPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF++I SD NV+ ILVN+FGGI+ C IA+G+V A + L++PLVVR
Sbjct: 298 VGGGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
LEGTNV+ GK+I+ +S LP+I A +L +AA V
Sbjct: 358 LEGTNVELGKKIMAQSGLPIIAADNLADAAEKV 390
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L++PLVVRLEGTNV+ GK+I+ +S LP+I A +L +AA + A
Sbjct: 338 AEGVVAAAREVSLNVPLVVRLEGTNVELGKKIMAQSGLPIIAADNLADAAEKVVKA 393
>gi|144898023|emb|CAM74887.1| Succinyl-CoA synthetase beta chain [Magnetospirillum
gryphiswaldense MSR-1]
Length = 398
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 245/398 (61%), Gaps = 36/398 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
A + KDL +V+K+QI AGGRG G F D K GV +V+++ + M+G L
Sbjct: 31 AIQVAKDLGGPVWVVKSQIHAGGRGKGSFKGDTSGKGGVRVVKSVEEVGAAADAMLGKVL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+T QT + G V ++ V + +I RE Y ++ DR + ++ S GG +IE VA K+P
Sbjct: 91 VTVQTGEQGKEVKRIYVEQGCDIRRELYLGLLIDRSTSRVTIMASTEGGMEIEEVAHKSP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + ID QG F ++ G Q + L L+ +++ ++
Sbjct: 151 EKILKVAIDPVQG-----------FQQYHGR---------QLAFGLGLTG--KQVGAAVK 188
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
F G L+ F+ +D + +EINPLV T + ++I++DAK+NFDDNA FR K+
Sbjct: 189 FMG-----------ALYKAFMDLDCSIVEINPLVVTGDDQLIALDAKVNFDDNALFRHKD 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I + SE DP E++A++++LNY+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLD
Sbjct: 238 IEEMRDESEEDPAELEAARHSLNYIKLDGSIGCMVNGAGLAMATMDIIKLYGASPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF++I SD NV+ ILVN+FGGI+ C IA+G+V A + L++PLVVR
Sbjct: 298 VGGGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
LEGTNV+ GK+I+ +S LP+I A +L D A +V A K
Sbjct: 358 LEGTNVELGKKIMAQSGLPIIAADNLADAAEKVVKAVK 395
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L++PLVVRLEGTNV+ GK+I+ +S LP+I A +L +AA + A
Sbjct: 338 AEGVVAAAREVSLNVPLVVRLEGTNVELGKKIMAQSGLPIIAADNLADAAEKVVKA 393
>gi|254466420|ref|ZP_05079831.1| succinyl-CoA synthetase, beta subunit [Rhodobacterales bacterium
Y4I]
gi|206687328|gb|EDZ47810.1| succinyl-CoA synthetase, beta subunit [Rhodobacterales bacterium
Y4I]
Length = 397
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 237/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 EEAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I RE Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEAGSGIERELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + IA L +G Q+
Sbjct: 146 VAAATPEKILSFSVDPATGYQPYHGRRIAFSLGLEG----------------------QQ 183
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+ ++ G +L+ F+ D LEINPL+ D+ + +DAK+ FD NA
Sbjct: 184 VKQCVKLMG-----------QLYKAFVEKDMEMLEINPLIIADDGNLKVLDAKVGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R ++ + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 VYRHADVAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIINTSGLDVIAADNLKDGAEKIVKAVKG 397
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEKGKEIINTSGLDVIAADNLKDGAEKIVKA 394
>gi|395491329|ref|ZP_10422908.1| succinyl-CoA synthetase subunit beta [Sphingomonas sp. PAMC 26617]
Length = 399
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 227/384 (59%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV D+ M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKTADDVRAAATDMLGNTLVTIQTGEHGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y ++ +R ++ S GG DIE VA TP + I ID
Sbjct: 103 VNRLYVTDGVDIAKEFYLALLVNRATGRVSMVASTEGGMDIETVAHDTPEKIHAIDIDQA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A LE +GDL +AA KL++ F+ +
Sbjct: 163 TGFQPHHGRAVAAALELKGDLAKQAANVASKLYDAFMGT--------------------- 201
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
DA Q+EINPL T++ +++ +DAK+ FD NA FR K++ + +E D
Sbjct: 202 ------------DAEQIEINPLAVTEDNKLMVLDAKVAFDGNAMFRHKDLLELRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PAELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II SD VK ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNV++GK
Sbjct: 310 AAFKIILSDPAVKGILVNIFGGIMRCDIIAEGIVAAAKEVNLSVPLVVRLEGTNVEKGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S L ++ A+DL +AA + A
Sbjct: 370 ILATSGLAIVPANDLGDAAKKIVA 393
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV++GK IL S L ++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVEKGKEILATSGLAIVPANDLGDAAKKIV 392
>gi|393722993|ref|ZP_10342920.1| succinyl-CoA synthetase subunit beta [Sphingomonas sp. PAMC 26605]
Length = 399
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/379 (43%), Positives = 226/379 (59%), Gaps = 36/379 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV ++ M+G+ L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKTADEVRAAATDMLGNTLVTIQTGDAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y ++ +R ++ S GG DIE VA TP + +I ID
Sbjct: 103 VNRLYVTDGVDIAKEFYLALLVNRATGRVSMVASTEGGMDIETVAHDTPEKIHSIDIDQA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A LE +GDL +A+ KL++ F+ +
Sbjct: 163 TGFQPHHGRSVAAALELKGDLAKQASFVASKLYDAFMGT--------------------- 201
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
DA Q+EINPL TD+ +++ +DAK+ FD+NA FR K++ + +E D
Sbjct: 202 ------------DAEQIEINPLAVTDDGKLMVLDAKVGFDNNALFRHKDLMDLRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PSELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF++I +D NVK ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNV+ GK
Sbjct: 310 AAFKLILADPNVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLEGTNVEAGKA 369
Query: 405 ILDESKLPLIFASDLDEAA 423
IL S L ++ A+DL +AA
Sbjct: 370 ILANSGLAIVPANDLGDAA 388
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV+ GK IL S L ++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVEAGKAILANSGLAIVPANDLGDAAKKIV 392
>gi|339504592|ref|YP_004692012.1| succinyl-CoA ligase (ADP-forming) subunit beta [Roseobacter
litoralis Och 149]
gi|338758585|gb|AEI95049.1| succinyl-CoA ligase (ADP-forming) subunit beta [Roseobacter
litoralis Och 149]
Length = 397
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/405 (43%), Positives = 233/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +L+ +V+KAQI AGGRG G F D G K GV T +V + +K
Sbjct: 29 EDAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEVDAGEKGGVRLTKSVAEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEDGAGIETELYLALLVDRQTSRVSFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + IA F L+ K + L L
Sbjct: 146 VAASTPEKILSFSVDPASGYQAFHGRRIA----FSLGLEGKQVKQCVGLMGL-------- 193
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
L+N F+ D LEINPL+ TD ++ +DAK+ FD NA
Sbjct: 194 ---------------------LYNAFMEKDMEMLEINPLIVTDSGDLKVLDAKVAFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I +V+E D +E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 MYRHADISELRDVTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNVQ+GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVQQGKDIINNSGLDVIAADNLKDGAQKIVKAVKG 397
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNVQ+GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVQQGKDIINNSGLDVIAADNLKDGAQKIVKA 394
>gi|409402635|ref|ZP_11252151.1| succinyl-CoA ligase subunit beta [Acidocella sp. MX-AZ02]
gi|409128800|gb|EKM98682.1| succinyl-CoA ligase subunit beta [Acidocella sp. MX-AZ02]
Length = 398
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/398 (43%), Positives = 237/398 (59%), Gaps = 36/398 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
A + K L YV+K+QI AGGRG G F D K GV ++ ++ MIG+ L
Sbjct: 31 AVDAAKKLPGPIYVVKSQIHAGGRGAGKFKGDPNGKGGVRLAKSLDEVREAAAAMIGNTL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
ITKQT G V +V V +I RE Y ++ DR + V++ S GG +IE VA P
Sbjct: 91 ITKQTGPAGRLVRRVYVESGCDIKRELYLSLLIDRSVSEVVIMASTEGGMEIEEVAEHHP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ PID GI+ A+ +A L +G +++ F +
Sbjct: 151 EKILRAPIDPASGISGFHARKLAFGLGLEG----------------------KQVGTFAK 188
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
F V ++N F+++D +EINPLV T E+ ++DAK+ FDDN+ +R
Sbjct: 189 F-----------VTAMYNAFVALDIAIIEINPLVVTGSGEIYALDAKVTFDDNSLYRHPE 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I + + E DP+E++A+KY+L+YV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLD
Sbjct: 238 IEALRDEGEEDPKELEANKYSLSYVALDGSIGCMVNGAGLAMATMDIIKLYGAEPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF+II SD NV+ ILVN+FGGI+ C IA+G++ A + LS+PLVVR
Sbjct: 298 VGGGATKERVTAAFKIILSDPNVEGILVNIFGGIMRCDVIAEGVIAAAREVSLSVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
LEGTNVQ GK I+ +S LP+I A +L D A +V A K
Sbjct: 358 LEGTNVQLGKDIMAKSGLPIIPADNLADAAEKIVKAVK 395
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + LS+PLVVRLEGTNVQ GK I+ +S LP+I A +L +AA + A
Sbjct: 338 AEGVIAAAREVSLSVPLVVRLEGTNVQLGKDIMAKSGLPIIPADNLADAAEKIVKA 393
>gi|340027741|ref|ZP_08663804.1| succinyl-CoA synthetase subunit beta [Paracoccus sp. TRP]
Length = 397
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 234/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+KAQI AGGRG GHF + G K GV +V++ + +M+G L+T QT + G
Sbjct: 43 WVVKAQIHAGGRGKGHFKEKEAGEKGGVRLAKSVEEAEELTRQMLGRTLVTHQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR + + S GG DIE VAA TP + + +D
Sbjct: 103 VNRIYIEDGSDIERELYLALLVDRGSSRISFVASTEGGMDIEEVAASTPEKIVSFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+++ F G +++A L +G +
Sbjct: 163 TGLSD-----------FHG----------------------RRVAFALGLKGAQVKQCVQ 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V+ L+ LFL D LEINPL+ + + +DAK+ FD+NA +RQ ++ + + +E D
Sbjct: 190 LVKNLYRLFLEKDMEMLEINPLIVMKDGNLKCLDAKMGFDNNALYRQPDVLALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E+ ASK++LNY+ +DG IGC+VNGAGLAMATMDIIKL G EPANFLDVGGG +E +
Sbjct: 250 PKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLFGAEPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
+AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 EAFKIITSDPNVKGILVNIFGGIMRCDIIAEGIIAAVKEVGLQVPLVVRLEGTNVELGKQ 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ +S L +I A DL +AA +V A K
Sbjct: 370 IIRDSGLNVIPADDLSDAAQKIVKAVKG 397
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I+ +S L +I A DL +AA + A
Sbjct: 339 AEGIIAAVKEVGLQVPLVVRLEGTNVELGKQIIRDSGLNVIPADDLSDAAQKIVKA 394
>gi|71082944|ref|YP_265663.1| succinyl-CoA synthetase subunit beta (SCS-beta) [Candidatus
Pelagibacter ubique HTCC1062]
gi|123647321|sp|Q4FP29.1|SUCC_PELUB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|71062057|gb|AAZ21060.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
Pelagibacter ubique HTCC1062]
Length = 386
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 239/391 (61%), Gaps = 41/391 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K L +++V+KAQI AGGRG GV N + ++ ++++G L+T QT
Sbjct: 36 KSLKTEKFVLKAQIHAGGRGKA-------GGVKILNTIDELSVAAKELLGKTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ V +S NI +E Y + DR + V I S GG DIE VA KTP + T
Sbjct: 89 AGREVKRLYVEESSNIDKEFYLSCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTK 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID+ I+++ + +K+ ++ +AD D K
Sbjct: 149 IDITDEISDA---------------------DCEKIIAIY------ALAD------DAKK 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+A ++ ++ +FL DA +E+NPL+ T E+++I +DAK+NFD NA FR I ++
Sbjct: 176 QAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFRHPEIIELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E DP E+DASK++L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++
Sbjct: 236 NEEDPTEIDASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGEEPANFLDVGGGASK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + A +II SD NVK IL+N+FGGI+ C +A+G+V+A K +S+PLVVRL GTN +
Sbjct: 296 EKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLAGTNFK 355
Query: 401 EGKRILDESKLPLIFASDLDEAAS-LVNACK 430
EGK ILD S L LI A +LD+AA +V A K
Sbjct: 356 EGKEILDNSGLKLISAENLDDAAQKIVEAIK 386
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K +S+PLVVRL GTN +EGK ILD S L LI A +LD+AA + A
Sbjct: 329 AQGVVDAAKEINISVPLVVRLAGTNFKEGKEILDNSGLKLISAENLDDAAQKIVEA 384
>gi|391227580|ref|ZP_10263787.1| succinyl-CoA synthetase, beta subunit [Opitutaceae bacterium TAV1]
gi|391223073|gb|EIQ01493.1| succinyl-CoA synthetase, beta subunit [Opitutaceae bacterium TAV1]
Length = 393
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 228/376 (60%), Gaps = 35/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QI AGGRG G F +GFK GV F D +KM G+ L+T QT G V+ V
Sbjct: 44 VVKSQIHAGGRGKGTFTDGFKGGVKFAQTKDDALEYAKKMFGNTLVTAQTGPAGRKVHTV 103
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ I E Y I+ DR + PV++ S GG +IE VAA+TP + + ID G+
Sbjct: 104 YFTEACKIRNEYYLAILLDRASSRPVIVASTEGGVEIEKVAAETPEKIFKVFIDPAFGL- 162
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKL-WNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
ADF EV++L ++L S K AA ++
Sbjct: 163 -------ADF-------------EVRELMFDLGFSPAESK-------------NAAKLIK 189
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ +F DA+ +E+NPLV T + +V+++DAK++FDDNA FR I + +++E DP+E
Sbjct: 190 NLYTMFWETDASMVEVNPLVTTSDDQVLALDAKVSFDDNALFRHPEIVAYRDLNEEDPKE 249
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK+NL+Y+ +DGNI CLVNGAGLAM+TMDIIK +GG PANFLDVGGG +E ++ AF
Sbjct: 250 IEASKFNLSYIALDGNIACLVNGAGLAMSTMDIIKHYGGNPANFLDVGGGATKEQVVAAF 309
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II D NVK I VN+FGGI++C IA G+V A K L++PLVVRLEG NV GK L
Sbjct: 310 KIILGDKNVKGIFVNIFGGIMDCNVIATGIVEAVKETGLTLPLVVRLEGNNVAAGKATLA 369
Query: 408 ESKLPLIFASDLDEAA 423
S L ++ + +AA
Sbjct: 370 SSGLTIVSGDTMADAA 385
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEG NV GK L S L ++ + +AA +
Sbjct: 336 ATGIVEAVKETGLTLPLVVRLEGNNVAAGKATLASSGLTIVSGDTMADAAQKIV 389
>gi|451941294|ref|YP_007461932.1| succinyl-CoA synthetase beta subunit [Bartonella australis
Aust/NH1]
gi|451900681|gb|AGF75144.1| succinyl-CoA synthetase beta subunit [Bartonella australis
Aust/NH1]
Length = 398
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/379 (43%), Positives = 232/379 (61%), Gaps = 36/379 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G LITKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKQLGPDAKGGVRLAKSVEEVVANVQEMLGKTLITKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y ++ DR ++S GG DIE VA KTP + T+ ID
Sbjct: 103 VNRLYIEDGADIEQELYLSLLVDRTTGQVSFVVSTEGGMDIETVAEKTPEKILTLSIDFS 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + D L+ G A + +KL+ +
Sbjct: 163 KGVTSEDCVKLCDALKLCG----SAREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIIMKDGHLRVLDAKVSFDNNALFRHSDILELRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLEVPLVVRLEGTNVEQGKE 369
Query: 405 ILDESKLPLIFASDLDEAA 423
I++ S L +I A+DLD+AA
Sbjct: 370 IINNSGLNVISANDLDDAA 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I++ S L +I A+DLD+AA ++A
Sbjct: 339 AEGVIAAVKEVGLEVPLVVRLEGTNVEQGKEIINNSGLNVISANDLDDAAQKIVVA 394
>gi|406909867|gb|EKD50029.1| hypothetical protein ACD_62C00676G0002 [uncultured bacterium]
Length = 400
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/388 (43%), Positives = 230/388 (59%), Gaps = 40/388 (10%)
Query: 49 VIKAQILAGGRGLGHFDNG-------FKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKT 101
V+KAQI AGGRG G + GV + ++ I +M+G+ L+T QT +
Sbjct: 43 VVKAQIHAGGRGKGQVLDRTNQNKLVLDGGVKVVKSAEEAKAIASQMLGNTLVTHQTGPS 102
Query: 102 GINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPI 161
G V V+V + +I +E Y +V DR + + S GG DIE VAA++P + + I
Sbjct: 103 GKTVKTVLVETACHIKKEYYLGLVLDRTKSRITFLASAEGGMDIETVAAQSPEKIFKLAI 162
Query: 162 DVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAK 221
D G FL +QG + + L L AQK F+
Sbjct: 163 DPAVG-----------FLPYQGR---------ELGYALGLDKEAQK--QFVAL------- 193
Query: 222 AATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVS 281
L++L+ DAT +EINPLV TD ++++D KINFDDNA +R I + ++
Sbjct: 194 ----CASLYHLYTQTDATVVEINPLVLTDNNTILALDGKINFDDNALYRHPEIVTLRDLD 249
Query: 282 ESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEE 341
E DP E++ASK+ L+Y+ +DGNIGC+VNGAGLAMAT+DIIKL+GGEPANFLDVGGG E
Sbjct: 250 EEDPNEIEASKHELSYISLDGNIGCMVNGAGLAMATLDIIKLYGGEPANFLDVGGGATRE 309
Query: 342 SIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQE 401
++ AF+II SD NVK ILVN+FGGI+ C IA G+V+A K L+IPLVVRL GTNV+
Sbjct: 310 TVTAAFKIILSDPNVKAILVNIFGGIMKCDVIAAGIVSASKELGLNIPLVVRLHGTNVEM 369
Query: 402 GKRILDESKLPLIFASDLDEAASLVNAC 429
G+RIL+ES L +I A ++EAA C
Sbjct: 370 GRRILNESGLSIISADTMEEAARQAVTC 397
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
AA +V+A K L+IPLVVRL GTNV+ G+RIL+ES L +I A ++EAA +
Sbjct: 342 AAGIVSASKELGLNIPLVVRLHGTNVEMGRRILNESGLSIISADTMEEAARQAV 395
>gi|91762632|ref|ZP_01264597.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
Pelagibacter ubique HTCC1002]
gi|91718434|gb|EAS85084.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Candidatus
Pelagibacter ubique HTCC1002]
Length = 386
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 239/391 (61%), Gaps = 41/391 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K L +++V+KAQI AGGRG GV N + ++ ++++G L+T QT
Sbjct: 36 KSLKTEKFVLKAQIHAGGRGKA-------GGVKILNTIDELSVAAKELLGKTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ V +S NI +E Y + DR + V I S GG DIE VA KTP + T
Sbjct: 89 AGREVKRLYVEESSNIDKEFYLSCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTK 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID+ I+++ + +K+ ++ +AD D K
Sbjct: 149 IDITDEISDA---------------------DCEKIIAIY------ALAD------DAKK 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+A ++ ++ +FL DA +E+NPL+ T E+++I +DAK+NFD NA FR I ++
Sbjct: 176 QAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFRHPEIIELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E DP E+DASK++L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++
Sbjct: 236 NEEDPAEIDASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGEEPANFLDVGGGASK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + A +II SD NVK IL+N+FGGI+ C +A+G+V+A K +S+PLVVRL GTN +
Sbjct: 296 EKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLAGTNFK 355
Query: 401 EGKRILDESKLPLIFASDLDEAA-SLVNACK 430
EGK ILD S L LI A +LD+AA +V A K
Sbjct: 356 EGKEILDNSGLKLISAENLDDAAKKIVKAIK 386
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K +S+PLVVRL GTN +EGK ILD S L LI A +LD+AA + A
Sbjct: 329 AQGVVDAAKEINISVPLVVRLAGTNFKEGKEILDNSGLKLISAENLDDAAKKIVKA 384
>gi|395785244|ref|ZP_10464977.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella tamiae
Th239]
gi|423717856|ref|ZP_17692046.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella tamiae
Th307]
gi|395425431|gb|EJF91600.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella tamiae
Th239]
gi|395426289|gb|EJF92416.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella tamiae
Th307]
Length = 398
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 234/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F DN K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELDNDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PI+
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRSVGQIAFVVSTEGGMDIETVAEETPEKILTLPINPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+ + + + L+ L A + KL+ +
Sbjct: 163 KGVMPEDGEKLCEALK----LSDTAREDGLKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + +DAK++FD+NA FR +I + SE D
Sbjct: 194 ----LYKAFTEKDMSLLEINPLIVMTNGHLRVLDAKVSFDNNALFRHPDIVELRDTSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +E +
Sbjct: 250 PKEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D +VK +LVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPHVKGVLVNIFGGIMRCDVIAEGVIAAVKDVGLKVPLVVRLEGTNVEQGKT 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKDVGLKVPLVVRLEGTNVEQGKTIINESGLNVISADDLDDAAQKIVAA 394
>gi|374290835|ref|YP_005037870.1| succinyl-CoA synthetase subunit beta [Azospirillum lipoferum 4B]
gi|357422774|emb|CBS85615.1| succinyl-CoA synthetase, beta subunit [Azospirillum lipoferum 4B]
Length = 398
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 238/400 (59%), Gaps = 36/400 (9%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIGH 91
+ A + ++L +V+K+QI AGGRG G F + K GV +++++ +M+ H
Sbjct: 29 QEAETVARELGGPVWVVKSQIHAGGRGAGRFKDNPEGKGGVRVVKSIEEVGKNAAEMLNH 88
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
L+TKQT G V ++ V + +I RE Y ++ DR ++ S GG +IE VA
Sbjct: 89 VLVTKQTGAEGREVKRLYVEEGADIKRELYLGMLIDRATGRVTIMASTEGGMEIEEVAHN 148
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP + + +D GI QG +K+A
Sbjct: 149 TPEKIVKVAVDPATGI--------------QG-------------------YHTRKVAFA 175
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
L G AA +Q + F+ +D +EINPL+ T +++++DAK+NFDDNA FR
Sbjct: 176 LGLEGKQVGSAAKFIQAAYQAFVDLDCAIVEINPLIVTGSGDILALDAKMNFDDNALFRH 235
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K++ + +E DP E++A+K++LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANF
Sbjct: 236 KDVEELRDEAEEDPAEIEAAKHSLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANF 295
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG +E + AF++I SDSNV+ ILVN+FGGI+ C IA+G+V A + L +PLV
Sbjct: 296 LDVGGGATKERVTAAFKLILSDSNVEGILVNIFGGIMRCDVIAEGVVAAAREVHLHVPLV 355
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
VRLEGTNV GK+IL ES LP++ A +L D A +V A K
Sbjct: 356 VRLEGTNVDLGKKILAESGLPILSADNLADAAEKVVKAVK 395
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV GK+IL ES LP++ A +L +AA + A
Sbjct: 338 AEGVVAAAREVHLHVPLVVRLEGTNVDLGKKILAESGLPILSADNLADAAEKVVKA 393
>gi|190347664|gb|EDK39982.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 327
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 212/338 (62%), Gaps = 33/338 (9%)
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
EKM+GHKLITKQT + G V V + + + E Y I+ DR P+++ S GG DI
Sbjct: 13 EKMLGHKLITKQTGEAGKEVTAVYIVERKDAKTEAYLAILMDRATQLPMIVASSQGGMDI 72
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VAAK P +KT PI + +G+T+S A +IA L F + +AA+ +QKL+ +F+
Sbjct: 73 EGVAAKDPDAIKTFPIQLDEGVTDSKATEIASVLGFSQEAVPEAASTIQKLYKVFMER-- 130
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
D TQ+EINPL E + V+++DAK+ FDD
Sbjct: 131 -------------------------------DCTQVEINPLSEITDGSVMAMDAKLGFDD 159
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FRQK +FS + ++ DP EV+A++Y LN++ +DGNI +VNGAGLAMATMDIIKL+G
Sbjct: 160 NASFRQKEVFSWRDPTQEDPEEVEAAEYGLNFIKLDGNIANIVNGAGLAMATMDIIKLNG 219
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
GEPANFLD GG E+I +AF +I SD V I VN+FGGIV C +AKGL+ A K+F+
Sbjct: 220 GEPANFLDCGGTATPETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAKGLIAATKNFQ 279
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L IP+VVRL+GTN++E K +++ S L L DLD AA
Sbjct: 280 LDIPVVVRLQGTNMKEAKELINNSGLKLYPFEDLDPAA 317
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F+L IP+VVRL+GTN++E K +++ S L L DLD AA +
Sbjct: 268 AKGLIAATKNFQLDIPVVVRLQGTNMKEAKELINNSGLKLYPFEDLDPAAEKIV 321
>gi|389696098|ref|ZP_10183740.1| succinyl-CoA synthetase, beta subunit [Microvirga sp. WSM3557]
gi|388584904|gb|EIM25199.1| succinyl-CoA synthetase, beta subunit [Microvirga sp. WSM3557]
Length = 399
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 235/390 (60%), Gaps = 37/390 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV ++ ++ +M+G+ L+T QT + G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEAAAGEKGGVRLAKSIDEVKEFARQMLGNTLVTVQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I E Y ++ DR ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYIEDGSDIDTELYLSMLVDRATGQVAFVVSTEGGMDIEQVAHDTPEKILTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + +A L +G +LA++ D
Sbjct: 163 TGVMPHHGRTVAKALGLKG-------------------ALAKEAEDL------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V KL+ F++ D LEINPL+ T ++ + +DAKI+FD NA +R I +++E D
Sbjct: 191 -VTKLYTAFIAKDMEMLEINPLIITKDQHLKCLDAKISFDGNALYRHPEIQELRDITEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G EPANFLDVGGG +EE +
Sbjct: 250 EKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVGGGASEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIARGVIAAVKAVGLQVPLVVRLEGTNVEEGKQ 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKSFK 433
I+ +S L +I A DLD+AA +VNA + K
Sbjct: 370 IIRDSGLNVIPADDLDDAAQKIVNAVRGGK 399
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K+ L +PLVVRLEGTNV+EGK+I+ +S L +I A DLD+AA +
Sbjct: 339 ARGVIAAVKAVGLQVPLVVRLEGTNVEEGKQIIRDSGLNVIPADDLDDAAQKIV 392
>gi|103485672|ref|YP_615233.1| succinyl-CoA synthetase subunit beta [Sphingopyxis alaskensis
RB2256]
gi|98975749|gb|ABF51900.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sphingopyxis
alaskensis RB2256]
Length = 426
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 168/389 (43%), Positives = 230/389 (59%), Gaps = 39/389 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQ 97
K L YV+K+QI AGGRG G F K GV +++++ +M+G+ L+T Q
Sbjct: 60 KQLPGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLARSIEEVGSHAREMLGNTLVTIQ 119
Query: 98 TPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVK 157
T + G VN++ + +I +E Y ++ DR + V+ S GG DIE VA TP +
Sbjct: 120 TGEAGKQVNRLYITDGADIKKEYYLALLVDRASSRIAVVASTEGGMDIETVAHNTPDKIH 179
Query: 158 TIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD 217
TI ID G+ + + +A LE GD
Sbjct: 180 TITIDPATGL---------------------------------MPHHGRSVAAALELTGD 206
Query: 218 LKAKAATEVQKLWNLFLSVDATQLEINPLV---ETDEREVISVDAKINFDDNAEFRQKNI 274
L +AA + L++ FL+ DA Q+EINPL + E++ +DAK+ FD NA FR +I
Sbjct: 207 LAKQAAKVLAGLYDAFLATDAEQIEINPLAVCEGANGDELLVLDAKLGFDGNAMFRHPDI 266
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
+++E DP EV+AS+Y+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDV
Sbjct: 267 AELRDLTEEDPAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDV 326
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GGG ++E + AF+II D V+ ILVN+FGGI+ C IA G+V A K LS+PLVVRL
Sbjct: 327 GGGASKEKVTAAFKIILKDPAVEGILVNIFGGIMKCDIIADGIVAAAKEVNLSVPLVVRL 386
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAA 423
EGTNVQ+GK IL S LP++ A+DL +AA
Sbjct: 387 EGTNVQQGKDILANSGLPIVAANDLGDAA 415
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A+DL +AA +
Sbjct: 366 ADGIVAAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVAANDLGDAAKKIV 419
>gi|319404899|emb|CBI78500.1| succinyl-CoA synthetase, beta chain [Bartonella rochalimae ATCC
BAA-1498]
Length = 398
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/404 (42%), Positives = 241/404 (59%), Gaps = 36/404 (8%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPI 84
V + A +K L YV+K+QI AGGRG G F + K GV +V+++
Sbjct: 23 VAIYSVEQAEKWVKKLPGPLYVVKSQIHAGGRGKGKFKELSSDSKGGVRLAKSVEEVITN 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+++M+G LITKQT G VN++ + +I RE Y ++ DR ++S GG D
Sbjct: 83 VKEMLGKTLITKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRTIGQVSFVVSTEGGMD 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VA +TP + T+PID +G+T S + D L+ L A + ++L+ +
Sbjct: 143 IEMVAEETPEKIFTLPIDPTKGVTPSDCTKLCDSLK----LCDSAREDGERLFPI----- 193
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
L+ F D + LEINPL+ D + +DAK++FD
Sbjct: 194 ------------------------LYKAFCEKDMSLLEINPLIVMDNGRLRVLDAKVSFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
+NA +R +I ++SE D +E++ASK++L YV +DG IGC+VNGAGLAMATMDIIKL+
Sbjct: 230 NNALYRHPDILELRDLSEEDSKEIEASKHDLAYVALDGTIGCMVNGAGLAMATMDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
G EPANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G++ A K
Sbjct: 290 GAEPANFLDVGGGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA + A
Sbjct: 350 GLKVPLVVRLEGTNVEQGKAIISESGLNVISADDLDDAAQKIVA 393
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEQGKAIISESGLNVISADDLDDAAQKIVAA 394
>gi|338972376|ref|ZP_08627751.1| succinyl-CoA ligase beta chain [Bradyrhizobiaceae bacterium SG-6C]
gi|338234540|gb|EGP09655.1| succinyl-CoA ligase beta chain [Bradyrhizobiaceae bacterium SG-6C]
Length = 398
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 233/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV +V ++ ++M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVDEVKEFSQQMLGATLVTIQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I +E Y + DR + ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYIEEGSDIEKELYLSALVDRETSEIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + G A+A L +GDL +A
Sbjct: 163 TGI-----------MPHHGRTAAQA----------------------LNLKGDLAKQAEK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ +L+ F++ D LEINPL+ T + ++ +DAKI+FD NA +R +I + + +E D
Sbjct: 190 LIAQLYTAFVAKDMAMLEINPLIITKQGDLRCLDAKISFDSNALYRHPDIVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G PANFLDVGGG EE +
Sbjct: 250 AKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGGATEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIARGVIAAVKAVGLQVPLVVRLEGTNVEEGKT 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A DLD+AA +VNA K
Sbjct: 370 IIRESGLNVLPADDLDDAAQKIVNAVKG 397
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K+ L +PLVVRLEGTNV+EGK I+ ES L ++ A DLD+AA +
Sbjct: 339 ARGVIAAVKAVGLQVPLVVRLEGTNVEEGKTIIRESGLNVLPADDLDDAAQKIV 392
>gi|259415170|ref|ZP_05739092.1| succinyl-CoA synthetase beta chain [Silicibacter sp. TrichCH4B]
gi|259349080|gb|EEW60834.1| succinyl-CoA synthetase beta chain [Silicibacter sp. TrichCH4B]
Length = 397
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 238/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
++A+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 DEAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR+ + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYLALLVDRVTSRVSFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA+TP + + +D G + IA L +G +V++ L
Sbjct: 146 VAAETPEKILSFSVDPATGYQPYHGRRIAFSLGLEG-------AQVKQCVKLM------- 191
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F+ D LEINPL+ TD ++ +DAK+ FD NA
Sbjct: 192 -------------------GQLYQAFIDKDMEMLEINPLIVTDTGDLKVLDAKLGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHADIAALRDETEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLE 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I+ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIIANSGLNVIAADDLSDGAQKIVKAVKG 397
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLEVPLVVRLEGTNVEKGKEIIANSGLNVIAADDLSDGAQKIVKA 394
>gi|400753216|ref|YP_006561584.1| succinyl-CoA ligase subunit beta [Phaeobacter gallaeciensis 2.10]
gi|398652369|gb|AFO86339.1| succinyl-CoA ligase [ADP-forming] subunit beta [Phaeobacter
gallaeciensis 2.10]
Length = 397
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 236/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 EDAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAADEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA+TP + + +D G + F G ++
Sbjct: 146 VAAETPEKILSFSVDPATG-----------YQAFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A L G + + +L+ F+ D LEINPL+ +D ++ +DAK+ FD NA
Sbjct: 173 VAFSLGLEGGQVKQCVKLMGQLYQAFVDKDMEMLEINPLIVSDSGDLKVLDAKVGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 VYRHADISELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+ GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVEAGKEIINTSGLDVIAADNLSDGAEKIVKAVKG 397
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEAGKEIINTSGLDVIAADNLSDGAEKIVKA 394
>gi|407768777|ref|ZP_11116155.1| succinyl-CoA synthetase subunit beta [Thalassospira xiamenensis M-5
= DSM 17429]
gi|407288461|gb|EKF13939.1| succinyl-CoA synthetase subunit beta [Thalassospira xiamenensis M-5
= DSM 17429]
Length = 399
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 167/382 (43%), Positives = 230/382 (60%), Gaps = 36/382 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F G K GV +V+++ +M+G L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGTFKEASAGDKGGVRVVKSVEEVGTNAGQMLGATLVTHQTGPDGKE 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V +V + + +I RE Y ++ DR + + + S GG DIE VA TP + T+ ID
Sbjct: 103 VKRVYIEEGCDIARELYLSLLVDRATSRVIFMASTEGGMDIEEVAEATPEKIVTVDIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G F F G +K+A L G +KA
Sbjct: 163 AG-----------FSGFHG----------------------RKLAFALGLEGKQVSKAVK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ ++N FL DA +EINPLV T + ++I++D K+NFDDNA FR +I + E +
Sbjct: 190 FMTAMYNCFLETDAAMVEINPLVVTGDGDIIALDCKMNFDDNALFRHPDIEELRDEDEEN 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++A+K++LNY+ +DG IGC+VNGAGLAMATMDIIKL+GG PANFLDVGGG +E +
Sbjct: 250 PAELEAAKHSLNYIKLDGTIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGATKERVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF++I SD NV+ ILVN+FGGI+ C IA G+V A + L++PLVVRLEGTNV+ GK+
Sbjct: 310 TAFKLILSDPNVEGILVNIFGGIMRCDVIADGVVAAAREVSLNVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLV 426
IL+ES LP++ A +L +AA V
Sbjct: 370 ILEESGLPIVSADNLADAAEKV 391
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L++PLVVRLEGTNV+ GK+IL+ES LP++ A +L +AA + A
Sbjct: 339 ADGVVAAAREVSLNVPLVVRLEGTNVELGKKILEESGLPIVSADNLADAAEKVVKA 394
>gi|380024290|ref|XP_003695934.1| PREDICTED: LOW QUALITY PROTEIN: succinyl-CoA ligase [ADP-forming]
subunit beta, mitochondrial-like [Apis florea]
Length = 449
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 230/388 (59%), Gaps = 33/388 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I +L K+ V+KAQ+LAGGRG+GHF + GV + ++ + MIG LIT
Sbjct: 65 AEKIAANLKTKDIVLKAQVLAGGRGIGHFKDTNVRGVVMCESPEEAKTVASSMIGKLLIT 124
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G N VMV + +E Y ++ + +GPV+I+S GG +IE++AA TP
Sbjct: 125 KQTGPAGKICNSVMVTTRMFPRKEYYMSVMLETTFDGPVIIVSKQGGVNIEDIAATTPEA 184
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +G+T L Q KI D L
Sbjct: 185 ISYTPIDIMKGLT--LEQ-------------------------------INKIVDNLGLE 211
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G+ K + + L+ LF+ DA LE NP E ++D K +FDD+AEFRQK +F
Sbjct: 212 GEGKKITSIIICNLYELFIEKDALLLEXNPFALDICEEYFALDCKCSFDDSAEFRQKELF 271
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++S+ DP E+ A+K+NLNY+ +DGNIGCLVNGAGLAMATMD+IK++GG PANFLDVG
Sbjct: 272 NLQDISQVDPSELHATKFNLNYIHLDGNIGCLVNGAGLAMATMDVIKMNGGFPANFLDVG 331
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G E++ + F+II SD NV+ I VN+FGGI+ C IA+G++ A K ++ +P+VVRL+
Sbjct: 332 GSATREAVTEGFKIILSDPNVEAIFVNIFGGIMRCDIIAQGIIAASKELQIKVPIVVRLQ 391
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GT V+EG +++ +++L + D AA
Sbjct: 392 GTRVKEGNQLIKDAQLKVFVEEDFSTAA 419
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K ++ +P+VVRL+GT V+EG +++ +++L + D AA
Sbjct: 370 AQGIIAASKELQIKVPIVVRLQGTRVKEGNQLIKDAQLKVFVEEDFSTAA 419
>gi|327289465|ref|XP_003229445.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Anolis carolinensis]
Length = 460
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 233/396 (58%), Gaps = 36/396 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A + + + + V+KAQ+L GGR G F+ G + GV + ++ + +MI
Sbjct: 75 ARTPEEAYTVARKIGTDDLVVKAQVLTGGRQNGVFEGGLRGGVQVVCSPEEAREVASRMI 134
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G +L T+QT K G N+V++ + + RE YF I +R GPV+I S GG IE+VA
Sbjct: 135 GKRLFTQQTGKMGRICNQVLICERKYLRREYYFAITMERAFQGPVLIGSSQGGVRIEDVA 194
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+ P + P+D+ +GITE A LAQK+
Sbjct: 195 AENPGAIIKQPVDIMEGITEEQA-----------------------------VQLAQKMG 225
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
F L + A + K++N F+ D LEINPLVE V+ +DAKI FD N+ F
Sbjct: 226 ----FPHHLLYEVADNMIKIYNFFIKYDVILLEINPLVEDSTGHVMCMDAKIIFDSNSAF 281
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQ+ IF + ++ D R+ +A+ LNY+ +DGNIGCLVNGAGLAMATMDIIKLHGG PA
Sbjct: 282 RQQKIFELQDWTQLDERDREAANAELNYIALDGNIGCLVNGAGLAMATMDIIKLHGGTPA 341
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
N+L+VGG E + +AF++I+S+ V+ ILVN+FGG++ C IA G++ + K L IP
Sbjct: 342 NYLNVGGSATVEQVTEAFKLITSNEKVQAILVNIFGGLMRCDVIAHGIIMSAKDLDLKIP 401
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
+VVRL+GT V++ K ++ ES L ++ DLD+AA +
Sbjct: 402 IVVRLQGTRVKDAKNLIAESGLKILPCDDLDQAAKM 437
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ + K L IP+VVRL+GT V++ K ++ ES L ++ DLD+AA +
Sbjct: 386 AHGIIMSAKDLDLKIPIVVRLQGTRVKDAKNLIAESGLKILPCDDLDQAAKMAV 439
>gi|423711890|ref|ZP_17686195.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
washoensis Sb944nv]
gi|395412738|gb|EJF79218.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
washoensis Sb944nv]
Length = 398
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 233/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ + +M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDSKGGVRLAKSVEEVVAHVTEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRSVGRVAFVVSTEGGMDIETVAEETPEKILTLPIDPV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + D LE + A + +KL+ +
Sbjct: 163 QGVTSADCTRLCDALELHNN----AREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 SKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDIIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ ES L +I A DLD+AA + A
Sbjct: 370 IIRESGLNVISADDLDDAAQKIIAA 394
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA I A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKEIIRESGLNVISADDLDDAAQKIIAA 394
>gi|254511388|ref|ZP_05123455.1| succinyl-CoA synthetase, beta subunit [Rhodobacteraceae bacterium
KLH11]
gi|221535099|gb|EEE38087.1| succinyl-CoA synthetase, beta subunit [Rhodobacteraceae bacterium
KLH11]
Length = 397
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 173/405 (42%), Positives = 235/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 EEAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEIDAGEKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPEGKQVNRIYIEAGSGIETEMYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + IA L QG +V++ L
Sbjct: 146 VAAATPEKILSFSVDPATGYQAYHGRRIAFALGLQG-------AQVKQCVKLM------- 191
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F+ D LEINPLV +D ++ +DAKI FD NA
Sbjct: 192 -------------------GQLYKAFIEKDMEMLEINPLVVSDRGDLKVLDAKIGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 VYRHPDIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIINTSGLDVIAADNLKDGAEKIVKAVKG 397
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVEKGKEIINTSGLDVIAADNLKDGAEKIVKA 394
>gi|373850126|ref|ZP_09592927.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Opitutaceae
bacterium TAV5]
gi|372476291|gb|EHP36300.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Opitutaceae
bacterium TAV5]
Length = 393
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 228/376 (60%), Gaps = 35/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QI AGGRG G F +GFK GV F D +KM G+ L+T QT G V+ V
Sbjct: 44 VVKSQIHAGGRGKGTFTDGFKGGVKFAQTKDDALEYAKKMFGNTLVTAQTGPAGRKVHTV 103
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ I E Y I+ DR + PV++ S GG +IE VAA+TP + + ID G+
Sbjct: 104 YFTEACKIRNEYYLAILLDRASSRPVIVASTEGGVEIEKVAAETPEKIFKVFIDPAFGL- 162
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKL-WNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
ADF EV++L ++L S K AA ++
Sbjct: 163 -------ADF-------------EVRELMFDLGFSPAESK-------------NAAKLIK 189
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ +F DA+ +E+NPLV T + +V+++DAK++FDDNA FR I + +++E DP+E
Sbjct: 190 NLYTMFWETDASMVEVNPLVTTSDDQVLALDAKVSFDDNALFRHPEIVACRDLNEEDPKE 249
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK+NL+Y+ +DGNI CLVNGAGLAM+TMDIIK +GG PANFLDVGGG +E ++ AF
Sbjct: 250 IEASKFNLSYIALDGNIACLVNGAGLAMSTMDIIKHYGGNPANFLDVGGGATKEQVVAAF 309
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II D NVK I VN+FGGI++C IA G+V A K L++PLVVRLEG NV GK L
Sbjct: 310 KIILGDKNVKGIFVNIFGGIMDCNVIATGIVEAVKETGLTLPLVVRLEGNNVAAGKATLA 369
Query: 408 ESKLPLIFASDLDEAA 423
S L ++ + +AA
Sbjct: 370 SSGLTIVSGDTMADAA 385
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEG NV GK L S L ++ + +AA +
Sbjct: 336 ATGIVEAVKETGLTLPLVVRLEGNNVAAGKATLASSGLTIVSGDTMADAAQKIV 389
>gi|83286160|ref|XP_730040.1| succinyl-coa ligase subunit beta, hydrogenosomal precursor
[Plasmodium yoelii yoelii 17XNL]
gi|23489549|gb|EAA21605.1| succinyl-coa ligase beta-chain, hydrogenosomal precursor
[Plasmodium yoelii yoelii]
Length = 458
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 233/387 (60%), Gaps = 37/387 (9%)
Query: 38 NILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITK 96
NI D++ VIKAQIL+GGRGLG+F +N F+ GVH N +I + KM+ + L+TK
Sbjct: 85 NICGDIDL---VIKAQILSGGRGLGYFKENKFEGGVHICRNSMEIKDVASKMLNNTLVTK 141
Query: 97 QTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLV 156
QT G N V + + I +E Y + DR + ++ S GG+ IE+++ KTP +
Sbjct: 142 QTGPDGKKCNTVFICERFYIRKERYVAFLLDRNSDSICLLGSSVGGSSIEDISKKTPEAI 201
Query: 157 KTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRG 216
I I++ G+T+ +++ + + F+G+ + AT++
Sbjct: 202 YKININIKDGLTDGQSREFCEQIGFKGN-ELDMATDM----------------------- 237
Query: 217 DLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFS 276
V L+ +F D T LEINPL ET++ V+ DAK+NFDDNAE+RQK IF
Sbjct: 238 ---------VVNLYKIFKKYDCTLLEINPLSETNDGRVLCCDAKLNFDDNAEYRQKEIFE 288
Query: 277 QNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGG 336
+ ++++ +P E++A KYNLNYV +DGNI C+VNGAGLAMAT+D+I LH G P+NFLDVGG
Sbjct: 289 KRDLTQENPEELEAKKYNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNFLDVGG 348
Query: 337 GVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEG 396
E I +A +II ++ K +N+ GGI+ C IA+G++NA K K PL++RLEG
Sbjct: 349 SATETEIAEALKIIDNNDKAKVCFINILGGIMRCDIIARGIINAAKQIKFKKPLIIRLEG 408
Query: 397 TNVQEGKRILDESKLPLIFASDLDEAA 423
TN +E +I++ESK+ I D++ AA
Sbjct: 409 TNEKEAIKIIEESKIKCIICQDMNLAA 435
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA K K PL++RLEGTN +E +I++ESK+ I D++ AA
Sbjct: 386 ARGIINAAKQIKFKKPLIIRLEGTNEKEAIKIIEESKIKCIICQDMNLAA 435
>gi|359788557|ref|ZP_09291531.1| succinyl-CoA synthetase subunit beta [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359255646|gb|EHK58548.1| succinyl-CoA synthetase subunit beta [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 397
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 235/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +++M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVEEVVANVKEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ +D
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKIVTVAVDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T Q + + L+ GD AA + + L+ L
Sbjct: 163 KGVTADDLQALNEALKLDGD----AAKDGETLFPL------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + + +DAK++FD+NA FR +I + +E D
Sbjct: 194 ----LYKAFVEKDMSLLEVNPLIVMKDGRLRVLDAKVSFDNNALFRHPDIMELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GKR
Sbjct: 310 AAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKR 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAKKIVAA 394
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GKRI++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKRIINESGLNVISADDLDDAAKKIVAA 394
>gi|395780514|ref|ZP_10460976.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
washoensis 085-0475]
gi|395418860|gb|EJF85177.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bartonella
washoensis 085-0475]
Length = 398
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 233/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ + +M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDSKGGVRLAKSVEEVVAHVTEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA +TP + T+PID
Sbjct: 103 VNRLYIEDGADIERELYLSLLVDRSVGRVAFVVSTEGGMDIETVAEETPEKILTLPIDPV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG+T + + D LE + A + +KL+ +
Sbjct: 163 QGVTSADCTRLCDALELHNN----AREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV ++G IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 SKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A + L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDIIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ ES L +I A DLD+AA + A
Sbjct: 370 IIRESGLNVISADDLDDAAQKIIAA 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK I+ ES L +I A DLD+AA I A
Sbjct: 339 AEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIIRESGLNVISADDLDDAAQKIIAA 394
>gi|313214028|emb|CBY40807.1| unnamed protein product [Oikopleura dioica]
gi|313229191|emb|CBY23776.1| unnamed protein product [Oikopleura dioica]
Length = 420
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/392 (43%), Positives = 234/392 (59%), Gaps = 42/392 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A +I K+L + V+KAQ+LAGGRGL NG GV + +D + E+MIG LIT
Sbjct: 45 AFDIAKNLPTPDCVVKAQVLAGGRGL----NG---GVKIVYSPEDAKALAEQMIGSDLIT 97
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHN--GPVVIISPSGGTDIENVAAKTP 153
KQT + G KV V + RE YF I +R GPV++ S SGG +IE VAA P
Sbjct: 98 KQTGEQGRPCEKVFVVERRYPRREYYFAITMERGATKFGPVLVGSASGGMNIEEVAATNP 157
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ +D+ G+ S+ Q +++A +
Sbjct: 158 EAIIKEHVDIEAGL--SMEQ-------------------------------CKRLASKMG 184
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
F + +AA K++ LF D + LEINPL E EV+++DAKINFD+NA +RQK+
Sbjct: 185 FPAYSQDEAADYFMKMYKLFKEKDCSLLEINPLAEDSTGEVLAMDAKINFDENAAYRQKD 244
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
IF + + D REV A++ +LNY+G+DGNIGCLVNGAGLAM+TMDII LHGG PANFLD
Sbjct: 245 IFELRDWKQEDEREVIAAQSDLNYIGLDGNIGCLVNGAGLAMSTMDIISLHGGSPANFLD 304
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG + + +AFR+I+SDS V+ ILVN+FGGI+ C IA+G++ A K L IP+VVR
Sbjct: 305 VGGGATADQVKEAFRLITSDSKVEAILVNIFGGIMRCDVIAQGIIAAAKELDLKIPIVVR 364
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
L+GT V + K ++ +S L ++ LDEAA +
Sbjct: 365 LQGTRVDDAKALIGQSGLKILSCDSLDEAAKM 396
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L IP+VVRL+GT V + K ++ +S L ++ LDEAA +
Sbjct: 345 AQGIIAAAKELDLKIPIVVRLQGTRVDDAKALIGQSGLKILSCDSLDEAAKMSV 398
>gi|414169223|ref|ZP_11425060.1| succinyl-CoA ligase [ADP-forming] subunit beta [Afipia
clevelandensis ATCC 49720]
gi|410885982|gb|EKS33795.1| succinyl-CoA ligase [ADP-forming] subunit beta [Afipia
clevelandensis ATCC 49720]
Length = 398
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 232/388 (59%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV +V ++ +M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVDEVKEFSRQMLGATLVTIQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I +E Y + DR + ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYIEEGSDIEKELYLSALVDRETSEIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + A L +GDL A + +KL
Sbjct: 163 TGIMPHHGRTAAQALNLKGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ +L+ F++ D LEINPL+ T + ++ +DAKI+FD NA +R +I + + +E D
Sbjct: 191 -IAQLYTAFVAKDMAMLEINPLIITKQGDLRCLDAKISFDSNALYRHPDIVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G PANFLDVGGG EE +
Sbjct: 250 AKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGGATEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIARGVIAAVKAVGLQVPLVVRLEGTNVEEGKT 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A DLD+AA +VNA K
Sbjct: 370 IIRESGLNVLPADDLDDAAQKIVNAVKG 397
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K+ L +PLVVRLEGTNV+EGK I+ ES L ++ A DLD+AA +
Sbjct: 339 ARGVIAAVKAVGLQVPLVVRLEGTNVEEGKTIIRESGLNVLPADDLDDAAQKIV 392
>gi|374998280|ref|YP_004973779.1| succinyl-CoA synthetase subunit beta [Azospirillum lipoferum 4B]
gi|357425705|emb|CBS88601.1| succinyl-CoA synthetase, beta subunit [Azospirillum lipoferum 4B]
Length = 399
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/396 (42%), Positives = 236/396 (59%), Gaps = 35/396 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIGHKL 93
A ++ ++L +V+K+QI AGGRG G F + K GV +V+++ +M+ H L
Sbjct: 31 AASVARELGGPVWVVKSQIHAGGRGAGRFQDNPTGKGGVRVVKSVEEVASNAAEMLNHVL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+TKQT G V ++ V + +I RE Y ++ DR +I S GG +IE VA TP
Sbjct: 91 VTKQTGPAGKEVKRLYVEEGADIKRELYLGLLIDRATGRVTIIASTEGGMEIEEVAHNTP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + ID GI QG +K+A L
Sbjct: 151 EKIVKVAIDPATGI--------------QG-------------------HHTRKVAFALG 177
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
G AA +Q + F +D +EINPL+ T +++++DAK++FDDNA FR K+
Sbjct: 178 LEGKQVGAAAMFIQAAYKAFTDLDCAIVEINPLIVTGAGDILALDAKMSFDDNALFRNKD 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
+ + + +E DP E++A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLD
Sbjct: 238 VAALRDEAEEDPAEIEAAKHELNYVKLDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF++I SDS V+ ILVN+FGGI+ C IA+G+V A + KL +PLVVR
Sbjct: 298 VGGGATKERVTAAFKLILSDSAVEGILVNIFGGIMRCDVIAEGVVAAARDVKLHVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
LEGTNV GK+IL +S LP++ A +LD+AA + A
Sbjct: 358 LEGTNVAFGKQILADSGLPILSADNLDDAARKIVAA 393
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + KL +PLVVRLEGTNV GK+IL +S LP++ A +LD+AA + A
Sbjct: 338 AEGVVAAARDVKLHVPLVVRLEGTNVAFGKQILADSGLPILSADNLDDAARKIVAA 393
>gi|401420316|ref|XP_003874647.1| succinyl-CoA ligase [GDP-forming] beta-chain,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322490883|emb|CBZ26147.1| succinyl-CoA ligase [GDP-forming] beta-chain,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 413
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 225/376 (59%), Gaps = 34/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QILAGGRG G F +GF+ GVH ++ + M+G+ L+TKQT G VN +
Sbjct: 63 VVKSQILAGGRGKGVFKDGFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVNTL 122
Query: 109 MVAKSV-NITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V ++V I RE Y ++ DR P+ I S GG IE +A P +KT+ ++V +G+
Sbjct: 123 YVTEAVAGIKRELYLSLILDRKSASPMFIGSAEGGMSIEELAKTHPEKIKTMKVNVAEGV 182
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
A A L F G+ +AA +++ ++N+ S
Sbjct: 183 DHDAAVAYAKELGFSGETAERAAEQIKAIYNIGKSK------------------------ 218
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
D T +EINP VE + +V+ +DAK++FDDNA FRQ+ IF+ + ++ D +E
Sbjct: 219 ---------DCTMVEINPFVELENGDVMEIDAKLSFDDNAVFRQRGIFALEDQTQIDSKE 269
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
V A K++LNY+ +DGN+GCLVNGAGLAMATMD I LHGG ANFLD GG +E I+ AF
Sbjct: 270 VLAKKHDLNYIALDGNVGCLVNGAGLAMATMDTISLHGGSAANFLDAGGSASEAQIVAAF 329
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II+ D+NVK ILVN+FGGI++C IA+G+VNA K SIP+VVRL GTN Q GK I+
Sbjct: 330 KIITGDANVKSILVNIFGGIMHCDVIAQGVVNASKVLNTSIPIVVRLCGTNEQRGKDIIR 389
Query: 408 ESKLPLIFASDLDEAA 423
S L + D D AA
Sbjct: 390 NSGLVIHPVEDFDSAA 405
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA K SIP+VVRL GTN Q GK I+ S L + D D AA
Sbjct: 356 AQGVVNASKVLNTSIPIVVRLCGTNEQRGKDIIRNSGLVIHPVEDFDSAA 405
>gi|197103624|ref|YP_002129001.1| succinyl-CoA synthetase subunit beta [Phenylobacterium zucineum
HLK1]
gi|226734970|sp|B4RCH3.1|SUCC_PHEZH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|196477044|gb|ACG76572.1| succinyl-CoA synthetase, beta subunit sucC [Phenylobacterium
zucineum HLK1]
Length = 399
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 232/388 (59%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F+ K GV +V ++ E+M+G L+T QT G
Sbjct: 43 FVVKSQIHAGGRGKGRFEGLGPDAKGGVRVVKSVDEVKANAEEMLGRVLVTHQTGAAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + I +E Y ++ DR + V+ S GG DIE VA TP + T ID
Sbjct: 103 VNRLYIEEGAQIAKEFYLSLLVDRETSWVSVVASTEGGMDIEEVAHATPEKIVTFSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + +A L G L +AAT
Sbjct: 163 TGV---------------------------------FPHHGRHLAKALGLTGGLAKEAAT 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ +L+ FL+ D + LEINPL+ T + + +DAK++FD NA FR ++ + + SE D
Sbjct: 190 LLNQLYAAFLAKDMSMLEINPLIVTGDDHLRVLDAKVSFDSNALFRHADVVALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L+Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKYDLSYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDIIAEGVVAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLIFASDL-DEAASLVNACKS 431
I++ES L +I A+DL D A +V A +
Sbjct: 370 IINESGLNVIAANDLSDGAEKIVKAVRG 397
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I++ES L +I A+DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIINESGLNVIAANDLSDGAEKIVKA 394
>gi|78186385|ref|YP_374428.1| succinyl-CoA synthetase subunit beta [Chlorobium luteolum DSM 273]
gi|123583394|sp|Q3B5J6.1|SUCC_PELLD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|78166287|gb|ABB23385.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
luteolum DSM 273]
Length = 391
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/383 (43%), Positives = 229/383 (59%), Gaps = 40/383 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
VIKAQI AGGRG GV + ++ I +M+G L+T QT G V ++
Sbjct: 48 VIKAQIHAGGRGKA-------GGVKLAKSPEEAHEIASQMLGTTLVTHQTGPEGKEVRRL 100
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+V + +NI RE Y I DR + V++IS GG +IE VA +TP L+ I +D G+
Sbjct: 101 LVEEGMNIDREFYVGITLDRATSNNVLMISTEGGMEIEKVAEETPELLLKIQVDARFGLQ 160
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
A++ A FL +G+ +FR A + +
Sbjct: 161 GFQAREAAFFLGLEGE----------------------------QFR-----NAVSFITA 187
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+N + S+DA EINPLV T E V+++DAKINFD NA +R K+ ++SE DP EV
Sbjct: 188 LYNAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRHKDFIELRDISEEDPFEV 247
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASK NLNYV +DGN+GC+VNGAGLAMATMD+I+L GG PANFLDVGGG + +++ + F+
Sbjct: 248 EASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGRPANFLDVGGGASPQTVEEGFK 307
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NVK ILVN+FGGIV C +A G++ A + L++P++VRLEGTN +++LDE
Sbjct: 308 IILSDKNVKAILVNIFGGIVRCDRVAGGIIEAARKIGLNLPVIVRLEGTNADIAQKMLDE 367
Query: 409 SKLPLIFASDLDEAASLVNACKS 431
S L LI A L +AA VN S
Sbjct: 368 SGLNLIAADGLKDAAQKVNQALS 390
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + L++P++VRLEGTN +++LDES L LI A L +AA
Sbjct: 333 AGGIIEAARKIGLNLPVIVRLEGTNADIAQKMLDESGLNLIAADGLKDAA 382
>gi|154345998|ref|XP_001568936.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134066278|emb|CAM44069.1| putative succinyl-CoA ligase [GDP-forming] beta-chain [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 413
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 226/376 (60%), Gaps = 34/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QILAGGRG G F +GF+ GVH ++ + M+G+ L+TKQT G V+ +
Sbjct: 63 VVKSQILAGGRGKGVFKDGFQGGVHVCDSAAAAVEAAKHMLGNTLVTKQTGPKGQLVSTL 122
Query: 109 MVAKSV-NITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V +++ +I RE Y ++ DR P+ + S GGT IE +A P +KT+ ++V +G+
Sbjct: 123 YVTEAIADIKRELYLSLILDRKSASPMFVGSAEGGTSIEELAKTNPEKIKTMKVNVAEGV 182
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
A A L F G+ AA +++ L+N+ S+
Sbjct: 183 DHDAAVAYAKELGFSGETAEHAAEQIKTLYNIGKSN------------------------ 218
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
D T +EINP VE +V+ +DAK++FDDNA FRQK IFS + + D +E
Sbjct: 219 ---------DCTMVEINPFVELKNGDVMEIDAKLSFDDNAAFRQKAIFSLEDQTMIDSKE 269
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
V A K++LNY+ ++GN+GCLVNGAGLAMATMD I LHGG ANFLD GG +E I+ AF
Sbjct: 270 VLAKKHDLNYIALEGNVGCLVNGAGLAMATMDAISLHGGSAANFLDAGGSASEAQIVSAF 329
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II+ D +VK ILVN+FGGI++C IA+G+VNA K+ +IP+VVRL GTN Q GK I+
Sbjct: 330 KIITGDPHVKSILVNIFGGIMHCDVIAQGVVNASKTLSTTIPIVVRLCGTNEQRGKDIIS 389
Query: 408 ESKLPLIFASDLDEAA 423
S L + A D D AA
Sbjct: 390 NSGLAIHSADDFDSAA 405
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +VNA K+ +IP+VVRL GTN Q GK I+ S L + A D D AA
Sbjct: 356 AQGVVNASKTLSTTIPIVVRLCGTNEQRGKDIISNSGLAIHSADDFDSAA 405
>gi|146414762|ref|XP_001483351.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 327
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 211/338 (62%), Gaps = 33/338 (9%)
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
EKM+GHKLITKQT + G V V + + + E Y I+ DR P+++ S GG DI
Sbjct: 13 EKMLGHKLITKQTGEAGKEVTAVYIVERKDAKTEAYLAILMDRATQLPMIVASSQGGMDI 72
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VAAK P +KT PI + +G+T+S A +IA L F + +AA +QKL+ +F+
Sbjct: 73 EGVAAKDPDAIKTFPIQLDEGVTDSKATEIASVLGFSQEAVPEAALTIQKLYKVFMER-- 130
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
D TQ+EINPL E + V+++DAK+ FDD
Sbjct: 131 -------------------------------DCTQVEINPLSEITDGSVMAMDAKLGFDD 159
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FRQK +FS + ++ DP EV+A++Y LN++ +DGNI +VNGAGLAMATMDIIKL+G
Sbjct: 160 NASFRQKEVFSWRDPTQEDPEEVEAAEYGLNFIKLDGNIANIVNGAGLAMATMDIIKLNG 219
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
GEPANFLD GG E+I +AF +I SD V I VN+FGGIV C +AKGL+ A K+F+
Sbjct: 220 GEPANFLDCGGTATPETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAKGLIAATKNFQ 279
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
L IP+VVRL+GTN++E K +++ S L L DLD AA
Sbjct: 280 LDIPVVVRLQGTNMKEAKELINNSGLKLYPFEDLDPAA 317
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F+L IP+VVRL+GTN++E K +++ S L L DLD AA +
Sbjct: 268 AKGLIAATKNFQLDIPVVVRLQGTNMKEAKELINNSGLKLYPFEDLDPAAEKIV 321
>gi|407773652|ref|ZP_11120952.1| succinyl-CoA synthetase subunit beta [Thalassospira profundimaris
WP0211]
gi|407283098|gb|EKF08639.1| succinyl-CoA synthetase subunit beta [Thalassospira profundimaris
WP0211]
Length = 399
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/382 (43%), Positives = 229/382 (59%), Gaps = 36/382 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F G K GV + +++ E+M+G L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGTFKEAKAGDKGGVRVVKSPEEVGTNAEQMLGSTLVTHQTGPDGKE 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V +V + + +I RE Y ++ DR + + + S GG DIE VA TP + T+ ID
Sbjct: 103 VKRVYIEEGCDIARELYLSVLVDRACSRVIFMASTEGGMDIEEVAEATPEKIVTVEIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G F F G +K+A L G +KA
Sbjct: 163 AG-----------FSGFHG----------------------RKLAFALGLEGKQVSKAVK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ ++ FL DA +EINPLV T + ++I++D K+NFDDNA FR +I + E +
Sbjct: 190 FMTAMYQCFLDTDAAMVEINPLVVTGDGDIIALDCKMNFDDNALFRHPDIEELRDEDEEN 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++A+K++LNY+ +DG IGC+VNGAGLAMATMDIIKL+GG PANFLDVGGG +E +
Sbjct: 250 PAELEAAKHSLNYIKLDGTIGCMVNGAGLAMATMDIIKLYGGAPANFLDVGGGATKERVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF++I SD NV+ ILVN+FGGI+ C IA G+V A + L++PLVVRLEGTNV+ GK+
Sbjct: 310 TAFKLILSDPNVEGILVNIFGGIMRCDVIADGVVAAAREVSLNVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLV 426
IL+ES LP++ A +L +AA V
Sbjct: 370 ILEESGLPIVSADNLADAAEKV 391
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L++PLVVRLEGTNV+ GK+IL+ES LP++ A +L +AA + A
Sbjct: 339 ADGVVAAAREVSLNVPLVVRLEGTNVELGKKILEESGLPIVSADNLADAAEKVVKA 394
>gi|89068133|ref|ZP_01155550.1| succinyl-CoA synthetase subunit beta [Oceanicola granulosus
HTCC2516]
gi|89046372|gb|EAR52429.1| succinyl-CoA synthetase subunit beta [Oceanicola granulosus
HTCC2516]
Length = 397
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 236/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A++A +L+ +V+KAQI AGGRG G F D G K GV +V++ ++
Sbjct: 29 EEAKSAAG---ELDGPLWVVKAQIHAGGRGKGSFQEADAGDKGGVRLAKSVEEAAEEAKR 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN+V + +I RE Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRVYIEDGSDIERELYLALLVDRQTSRVSFVASTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + F G ++
Sbjct: 146 VAASTPEKILSFSVDPATG-----------YQPFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
I L G + + L+ +F+ D LEINPL+ TD+ ++ +DAKI FD NA
Sbjct: 173 IGFALGLEGAALKQCVKLMGTLYKMFVERDMEMLEINPLIVTDKGDLKCLDAKIGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+RQ +I S + +E D +E+ ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LYRQPDILSLRDETEEDAKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLE 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I+ +S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIIAQSGLNVIAADDLKDGAEKIVKAVKG 397
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ +S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLEVPLVVRLEGTNVEKGKEIIAQSGLNVIAADDLKDGAEKIVKA 394
>gi|83944440|ref|ZP_00956894.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. EE-36]
gi|83844763|gb|EAP82646.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. EE-36]
Length = 397
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 236/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A+TA +++ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 EEAKTAAG---EMDGPLWVVKAQIHAGGRGKGSFKEADAGDKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYLALLVDRQTSRIGFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + + +D G F + G ++
Sbjct: 146 VAESTPEKIISFSVDPAAG-----------FQPYHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A L G + T + +L+ F+ D LEINPL+ TD ++ +DAK++FD NA
Sbjct: 173 VAFALGLEGKQVKQCVTLMGQLFKAFVEKDMEMLEINPLIVTDSGDLKVLDAKVSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 MYRHGDIADLRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+EGK I++ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+EGK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKA 394
>gi|338708589|ref|YP_004662790.1| succinyl-CoA synthetase subunit beta [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336295393|gb|AEI38500.1| succinyl-CoA synthetase, beta subunit [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 398
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/406 (42%), Positives = 235/406 (57%), Gaps = 44/406 (10%)
Query: 29 CLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF-----DNGFKSGVHFTNNVQDIPP 83
+EDA TA + L+ YVIK+QILAGGRG GHF D G GV +V+ +
Sbjct: 27 TIEDAITAA---EKLSGPSYVIKSQILAGGRGKGHFWESPSDGG---GVRIARDVESLKN 80
Query: 84 ILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGT 143
+ +M+G L+T QT K GI V KV + ++++I E Y ++ DR ++SP GG
Sbjct: 81 HVTRMLGKHLVTAQTDKKGILVEKVFITEAIDIVSEYYLSLLVDRQTGRITFVVSPEGGM 140
Query: 144 DIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSS 203
DIE VA P + I +D G + I L +GD+
Sbjct: 141 DIEAVARDKPEAIHRISVDPATGFQAHHGRAIGFALGLKGDI------------------ 182
Query: 204 LAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINF 263
F+ +K AA L+ F+ D + LEINPLVET + +++ DAK++F
Sbjct: 183 ----------FKQSIKLSAA-----LYKAFVETDMSLLEINPLVETGDGKLLPADAKVSF 227
Query: 264 DDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKL 323
DDNA FR +I + E SDP E +A K L+Y+ +DG+IGC+VNGAGLAM TMDII+L
Sbjct: 228 DDNALFRHPDIAALGEAGTSDPLEQEAKKSGLSYIKLDGSIGCMVNGAGLAMGTMDIIQL 287
Query: 324 HGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKS 383
HG PANFLDVGGG + E + AFRII SD +VK IL+N+FGGI+ C +A+G++ A +
Sbjct: 288 HGEMPANFLDVGGGASREKVATAFRIILSDPSVKGILINIFGGIMRCDILAEGIIAAARE 347
Query: 384 FKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
+++PLVVRLEG NV+EGK L S L +I A+DL +AA + A
Sbjct: 348 LDINVPLVVRLEGNNVKEGKAALVSSGLAIITANDLGDAAEKIVAA 393
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + +++PLVVRLEG NV+EGK L S L +I A+DL +AA + A
Sbjct: 338 AEGIIAAARELDINVPLVVRLEGNNVKEGKAALVSSGLAIITANDLGDAAEKIVAA 393
>gi|349687183|ref|ZP_08898325.1| succinyl-CoA synthetase subunit beta [Gluconacetobacter oboediens
174Bp2]
Length = 399
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 233/386 (60%), Gaps = 36/386 (9%)
Query: 49 VIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
V+KAQI AGGRG GHF K GV + D+ + M+G LITKQT G V
Sbjct: 44 VVKAQIHAGGRGAGHFAGKPEGKGGVRLARSADDVTDAAQAMLGEVLITKQTGPAGRLVR 103
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
+ + +I RE YF ++ DR V++ SP GG +IE+VAA+TP + ID +G
Sbjct: 104 TLYIESGCDIARELYFSMLVDRSTGQIVIVASPDGGMEIEDVAARTPERILKEYIDPAKG 163
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+ + ++D+A L +G E++ N+ V
Sbjct: 164 LCDYQSRDVAVRLGLKG-------REIRAFQNV--------------------------V 190
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+ +N F +DA +EINPLV T +++++DAK++FD+NA FR ++ +V E DPR
Sbjct: 191 RSAYNAFTGLDAAIVEINPLVVTGAGDLLALDAKMSFDENALFRHPDLARLRDVHEEDPR 250
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
E +A++Y L YVG+DGNIGC+VNGAGLAMATMDIIK+ G EPANFLDVGGG ++E + A
Sbjct: 251 EREAAEYGLAYVGLDGNIGCMVNGAGLAMATMDIIKMEGEEPANFLDVGGGASKERVAAA 310
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
FRI+ D V+ ILVN+FGGI+ C IA+ ++ A +L++PLVVRL GTNV+ GK +L
Sbjct: 311 FRILIGDPKVRGILVNIFGGIMRCDVIAEAIIAASHETRLNVPLVVRLAGTNVERGKALL 370
Query: 407 DESKLPLIFASDLDEAA-SLVNACKS 431
ES L +I A DL +AA +V+A ++
Sbjct: 371 AESGLTIIPADDLGDAARKIVSAVRN 396
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +++ A +L++PLVVRL GTNV+ GK +L ES L +I A DL +AA + A
Sbjct: 338 AEAIIAASHETRLNVPLVVRLAGTNVERGKALLAESGLTIIPADDLGDAARKIVSA 393
>gi|328545847|ref|YP_004305956.1| ATP-dependent carboxylate-amine ligase-like protein [Polymorphum
gilvum SL003B-26A1]
gi|326415587|gb|ADZ72650.1| ATP-dependent carboxylate-amine ligase-like, ATP-grasp:Succinyl-CoA
synthetase, beta subunit:ATP-citrate lyase/succinyl-CoA
l [Polymorphum gilvum SL003B-26A1]
Length = 399
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/370 (44%), Positives = 223/370 (60%), Gaps = 36/370 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F K GV + +++D+ +M+GH L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKELPADAKGGVRLSFSLEDVVKNAREMLGHTLVTAQTGPAGKV 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIERELYLSILVDRSVGRPAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPD 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+TE AD A ++ D LE G +A T
Sbjct: 163 TGVTE------AD---------------------------AARLCDALELEGAARADGMT 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LEINPL+ + + +DAK++FD NA FR I + +++E D
Sbjct: 190 LFPILYKAFMEKDMSLLEINPLIVMKDGRLRVLDAKVSFDGNALFRHPEIVALRDITEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+SD NVK ILVN+FGGI+ C IA+G++ A + L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVLAAVREVGLQVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLI 414
I+ ES L +I
Sbjct: 370 IIAESGLNVI 379
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A ++ A + L +PLVVRLEGTNV+ GK+I+ ES L +I
Sbjct: 339 AEGVLAAVREVGLQVPLVVRLEGTNVELGKKIIAESGLNVI 379
>gi|118590556|ref|ZP_01547958.1| succinyl-CoA synthetase subunit beta [Stappia aggregata IAM 12614]
gi|118437019|gb|EAV43658.1| succinyl-CoA synthetase subunit beta [Stappia aggregata IAM 12614]
Length = 399
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/393 (42%), Positives = 234/393 (59%), Gaps = 36/393 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
+ V + A A K L +V+K+QI AGGRG G F K GV ++ ++
Sbjct: 20 AEGVAIFSADEAEAAAKSLPGPLWVVKSQIHAGGRGKGKFKELSADAKGGVRLAFSLDEV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
++M+G+ L+TKQT G VN++ + +I RE Y I+ DR P ++S G
Sbjct: 80 TSNAKEMLGNTLVTKQTGAAGKVVNRLYIEDGADIERELYLSILVDRTVGRPAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA +TP + T+PID G+TE+ A + D LE G A + KL+ +
Sbjct: 140 GMDIEAVAEETPEKIVTLPIDPEAGVTEADAAKLCDALELTG----AAREDGMKLFPILH 195
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
++ +K D + LE+NPL+ + + +DAK+
Sbjct: 196 TAFVEK-----------------------------DMSLLEVNPLIVMKDGHLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR +I +V+E D +E++ASKY+L YV +DG+IGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHPDILELRDVTEEDEKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANFLDVGGG ++E + AF+II+SD NVK ILVN+FGGI+ C IA+G+V A
Sbjct: 287 KLYGAEPANFLDVGGGASKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 414
K L +PLVVRLEGTNV+ GK+I++ES L +I
Sbjct: 347 KEVGLQVPLVVRLEGTNVELGKKIINESGLNVI 379
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGTNV+ GK+I++ES L +I
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVELGKKIINESGLNVI 379
>gi|90421717|ref|YP_530087.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
BisB18]
gi|122477686|sp|Q21CW8.1|SUCC_RHOPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|90103731|gb|ABD85768.1| succinyl-CoA synthetase (ADP-forming) beta subunit
[Rhodopseudomonas palustris BisB18]
Length = 399
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/407 (41%), Positives = 241/407 (59%), Gaps = 37/407 (9%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPI 84
V + A A K L +V+K+QI AGGRG G F G K GV +++++
Sbjct: 23 VAILKATDAEAAAKQLGGPIWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIEEVKQY 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+M+G L+T QT G VN++ + +I +E Y ++ DR+ + ++S GG +
Sbjct: 83 AAEMLGATLVTIQTGPAGKQVNRLYIEDGSDIEKEFYLSLLVDRVTSRISFVVSTEGGMN 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE+VA TP + + +D GI + +A L GDL A + ++L
Sbjct: 143 IEDVAHDTPEKIISFSVDPATGIMGHHGRTVAKALGLTGDL----AKQAERL-------- 190
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
V +L+ F+S D LEINPLV T + E+ +DAK++FD
Sbjct: 191 ---------------------VAQLYAAFISKDMEMLEINPLVVTKQGELKCLDAKMSFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
NA +R +I + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+
Sbjct: 230 GNALYRHPDISALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
G PANFLDVGGG N+E + AF+II++D NVK IL+N+FGGI+ C IA+G+V A K
Sbjct: 290 GMTPANFLDVGGGANKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKDV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACK 430
L +PLVVRLEGTNV+ GK+I+ ES L ++ A DLD+AA +V A K
Sbjct: 350 GLKVPLVVRLEGTNVEAGKKIIQESGLNVLSADDLDDAAQKIVKAVK 396
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK+I+ ES L ++ A DLD+AA + A
Sbjct: 339 AEGVVAAVKDVGLKVPLVVRLEGTNVEAGKKIIQESGLNVLSADDLDDAAQKIVKA 394
>gi|99078490|ref|YP_611748.1| succinyl-CoA synthetase subunit beta [Ruegeria sp. TM1040]
gi|99035628|gb|ABF62486.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Ruegeria sp.
TM1040]
Length = 397
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 237/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
++A+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 DEAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR+ + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYLALLVDRVTSRVSFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA+TP + + +D G + +A L +G +V++ L
Sbjct: 146 VAAETPEKILSFSVDPATGYQAYHGRRVAFSLGLEG-------AQVKQCVKLM------- 191
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F+ D LEINPL+ D ++ +DAK+ FD NA
Sbjct: 192 -------------------GQLYQAFIEKDMEMLEINPLIVADNGDLKVLDAKVGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHADIAALRDETEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLE 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I+ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIIANSGLNVIAADDLSDGAEKIVKAVKG 397
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLEVPLVVRLEGTNVEKGKEIIANSGLNVIAADDLSDGAEKIVKA 394
>gi|389878865|ref|YP_006372430.1| succinyl-CoA synthetase subunit beta [Tistrella mobilis
KA081020-065]
gi|388529649|gb|AFK54846.1| succinyl-CoA synthetase, beta subunit [Tistrella mobilis
KA081020-065]
Length = 389
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/396 (43%), Positives = 234/396 (59%), Gaps = 41/396 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L +V+KAQI AGGRG GV ++ D+ + M+G L+T
Sbjct: 31 AVEVAKSLGGPVWVVKAQIHAGGRGKA-------GGVKVVKSLDDVAATAKNMLGMTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V +V + + +I RE Y +V DR + + S GG +IE VA +TP
Sbjct: 84 HQTGPEGKEVKRVYIEEGCDIRRELYLGVVIDRETSSVTFMASTEGGMEIEEVAKETPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +P+DV G+ A+ IA L +G + AT+ F+ ++ Q +
Sbjct: 144 IIKVPVDVITGMQPFHARKIAYGLGLEGK-QVSVATK-------FMLAMYQAV------- 188
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ DA+ +EINPLV T +VI++DAK+NFDDNA FR K+I
Sbjct: 189 ------------------IGTDASIVEINPLVVTGAGDVIALDAKMNFDDNALFRHKDIE 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ SE DP E++AS++ LNY+ +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVG
Sbjct: 231 DLRDESEEDPSELEASRHALNYIKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + AF++I SD NV+ ILVN+FGGI+ C IA+G+V A + L +PLVVRLE
Sbjct: 291 GGATRERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREISLQVPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
GTNV++GK IL S LP++ A DL D A +V A K
Sbjct: 351 GTNVEKGKAILANSGLPIMSADDLADAAEKIVKAVK 386
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV++GK IL S LP++ A DL +AA + A
Sbjct: 329 AEGVVAAAREISLQVPLVVRLEGTNVEKGKAILANSGLPIMSADDLADAAEKIVKA 384
>gi|75674618|ref|YP_317039.1| succinyl-CoA synthetase subunit beta [Nitrobacter winogradskyi
Nb-255]
gi|123614178|sp|Q3SVK4.1|SUCC_NITWN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|74419488|gb|ABA03687.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrobacter
winogradskyi Nb-255]
Length = 399
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 233/387 (60%), Gaps = 37/387 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV ++ ++ +M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGEKGGVRLARSIDEVKTFAGQMLGATLVTAQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I +E YF + DR + ++S GG +IE VA KTP + T +D
Sbjct: 103 VNRLYIEEGSDIDKEFYFSALVDRETSRISFVVSTEGGMNIEEVAHKTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ +S + +A L RGDL +A
Sbjct: 163 TGV---------------------------------MSHHGRTVARALRLRGDLGKQAEK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V +L++ F++ D LEINPLV T + E+ +DAKI+FD NA +R ++ + + SE D
Sbjct: 190 LVTQLYDAFIARDMAMLEINPLVVTKQGELRVLDAKISFDSNALYRHSDVVALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++AS+++L+YV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++ +
Sbjct: 250 AKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGGATKDKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK IL+N+FGGI+ C IA G+V A K L++PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILINIFGGIMKCDVIADGVVAAVKQVGLNVPLVVRLEGTNVDAGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACK 430
I+ ES L ++ A DLD+AA +V A K
Sbjct: 370 IIRESGLNVLPADDLDDAAQKIVKAVK 396
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L++PLVVRLEGTNV GK+I+ ES L ++ A DLD+AA + A
Sbjct: 339 ADGVVAAVKQVGLNVPLVVRLEGTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKA 394
>gi|83953481|ref|ZP_00962203.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. NAS-14.1]
gi|83842449|gb|EAP81617.1| succinyl-CoA synthase, beta subunit [Sulfitobacter sp. NAS-14.1]
Length = 397
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 236/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A+TA +++ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 EEAKTAAG---EMDGPLWVVKAQIHAGGRGKGSFKEADAGDKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYLALLVDRQTSRIGFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + + +D G F + G ++
Sbjct: 146 VAESTPEKIISFSVDPAAG-----------FQPYHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A L G + T + +L+ F+ D LEINPL+ TD ++ +DAK++FD NA
Sbjct: 173 VAFALGLEGKQVKQCVTLMGQLFKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 MYRHGDIADLRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+EGK I++ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+EGK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKA 394
>gi|365896834|ref|ZP_09434887.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. STM 3843]
gi|365422422|emb|CCE07429.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. STM 3843]
Length = 398
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 240/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
ED+ A K L +V+K+QI AGGRG G F G K GV +V ++ ++
Sbjct: 29 EDSDAAA---KTLGGPIWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVAEVNEFAKQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I +E Y ++ DR + ++S GG +IE+
Sbjct: 86 MLGATLVTVQTGAEGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + T +D G+ + +A L+ GDL A + +KL
Sbjct: 146 VAHETPEKIVTFSVDPATGVMPHHGRTVAKALKLSGDL----AKQAEKLAT--------- 192
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F++ D LEINPLV T + ++ +DAK++FD NA
Sbjct: 193 --------------------QLYTAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FR I + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LFRHPEIVELRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGME 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG N+E + AF+II++D NVK IL+N+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGANKEKVTAAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV+ GK+I+ ES L ++ A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVELGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVELGKKIISESGLNVLPADNLDDAAQKIVKA 394
>gi|338715476|ref|XP_003363273.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
mitochondrial-like [Equus caballus]
Length = 329
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/339 (47%), Positives = 214/339 (63%), Gaps = 33/339 (9%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIG KL TKQT + G N+V+V + RE YF I +R GPV+I S GG +IE+
Sbjct: 1 MIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIED 60
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA+TP + PID+ +GI + A LAQK
Sbjct: 61 VAAETPEAIVKEPIDIVEGIKKEQA-----------------------------VRLAQK 91
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+ F ++ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+
Sbjct: 92 MG----FPPNIVDSAAENMVKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNS 147
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+RQK IF + ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG
Sbjct: 148 AYRQKKIFDLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGT 207
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++
Sbjct: 208 PANFLDVGGGATVHQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIK 267
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
IP+VVRL+GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 268 IPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMV 306
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 254 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALITDSGLKILACDDLDEAAKMVV 307
>gi|154244112|ref|YP_001415070.1| succinyl-CoA synthetase subunit beta [Xanthobacter autotrophicus
Py2]
gi|154158197|gb|ABS65413.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
Py2]
Length = 400
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/403 (41%), Positives = 237/403 (58%), Gaps = 39/403 (9%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILE 86
+EDA A K+L +V+K+QI AGGRG G F + G K GV ++ ++ +
Sbjct: 28 VEDAEAAA---KELGGPLWVVKSQIHAGGRGKGKFKEPEAGDKGGVRLAKSIDEVKTFVS 84
Query: 87 KMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIE 146
+M+G+ L+T QT G VN++ + +I +E Y ++ DR + ++S GG DIE
Sbjct: 85 QMLGNTLVTIQTGPAGKQVNRLYLEDGSDIEKEFYISLLVDRATSHVAFVVSTEGGMDIE 144
Query: 147 NVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQ 206
VA P + T +D G+ + IA L GDL +A
Sbjct: 145 EVAHSHPEKIVTFSVDPVTGVQGFHGRKIAKALGLTGDLAKQAG---------------- 188
Query: 207 KIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDN 266
K+A+ L+ F+ D LEINPL+ T + ++ +DAK+ FD N
Sbjct: 189 KLAEV-----------------LYTAFVDTDMAMLEINPLIITKDAQLRVLDAKVTFDSN 231
Query: 267 AEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
A FR + +++E D +E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DII+L+G
Sbjct: 232 AMFRHPELAELRDLTEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIQLYGE 291
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKL 386
PANFLDVGGG NEE + AF+II++D NVK ILVN+FGGI+ C IA+G++ A K+ L
Sbjct: 292 SPANFLDVGGGANEEKVTAAFKIITADPNVKGILVNIFGGIMQCDVIARGVLAAVKAVGL 351
Query: 387 SIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
+PLVVRLEGTNV+EGK+I+ ES L +I A DLD+AA + A
Sbjct: 352 EVPLVVRLEGTNVEEGKKIIRESGLNVIPADDLDDAAQKIVAA 394
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K+ L +PLVVRLEGTNV+EGK+I+ ES L +I A DLD+AA + A
Sbjct: 339 ARGVLAAVKAVGLEVPLVVRLEGTNVEEGKKIIRESGLNVIPADDLDDAAQKIVAA 394
>gi|452962648|gb|EME67764.1| succinyl-CoA synthetase [Magnetospirillum sp. SO-1]
Length = 398
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 238/393 (60%), Gaps = 35/393 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDN--GFKSGVHFTNNVQDIPPILEKMIGHKL 93
A + K+L +V+K+QI AGGRG G F N K GV ++ ++ +++M+G L
Sbjct: 31 AVQVAKELGGPVWVVKSQIHAGGRGAGRFKNDPNGKGGVRVVKSIDEVKSNVDQMLGQIL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+TKQT G V +V + + +I RE Y ++ DR ++ S GG +IE VA P
Sbjct: 91 VTKQTGPAGKEVKRVYIEQGCDIKRELYLSMLVDRATCRVTIVASTEGGMEIEEVAHSHP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + ID +G + + IA L +G +++ ++
Sbjct: 151 EKILKVAIDPVEGFQQYHGRQIAFGLGLEG----------------------KQVNTAVK 188
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
F G L+ F+ +D + +EINPLV T E+I++DAK+NFDDNA FR K+
Sbjct: 189 FIG-----------ALYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRHKD 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I + SE DP E++A++++LNY+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLD
Sbjct: 238 IEELRDESEEDPAELEAARHSLNYIKLDGQIGCMVNGAGLAMATMDIIKLYGAEPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF++I SD NV+ ILVN+FGGI+ C IA+G+V A + L++PLVVR
Sbjct: 298 VGGGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLNVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
LEGTNV+ GK+I+ +S LP+I A +L +AA V
Sbjct: 358 LEGTNVELGKKIMAQSGLPIIAADNLADAAEKV 390
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L++PLVVRLEGTNV+ GK+I+ +S LP+I A +L +AA + A
Sbjct: 338 AEGVVAAAREVSLNVPLVVRLEGTNVELGKKIMAQSGLPIIAADNLADAAEKVVKA 393
>gi|392383606|ref|YP_005032803.1| succinyl-CoA synthetase, beta subunit [Azospirillum brasilense
Sp245]
gi|356878571|emb|CCC99458.1| succinyl-CoA synthetase, beta subunit [Azospirillum brasilense
Sp245]
Length = 398
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/400 (41%), Positives = 239/400 (59%), Gaps = 36/400 (9%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIGH 91
+ A + ++L +V+K+QI AGGRG G F + K GV +++++ +M+ H
Sbjct: 29 QEAETVARELGGPVWVVKSQIHAGGRGAGRFKDNPEGKGGVRVVKSIEEVGKNAAEMLNH 88
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
L+TKQT G V ++ V + +I RE Y ++ DR ++ S GG +IE VA
Sbjct: 89 VLVTKQTGAEGREVKRLYVEEGADIKRELYLGMLTDRATGRVTIMASTEGGMEIEEVAHN 148
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP + + ID GI QG +K+A
Sbjct: 149 TPEKIVKVAIDPATGI--------------QG-------------------YHTRKVAFA 175
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
L G + AA + + F+ +D +EINPL+ T E++++DAK++FDDNA FR
Sbjct: 176 LGLEGKQVSAAAKFIVAAYQAFVDLDCAIVEINPLIVTGSGEILALDAKMSFDDNALFRH 235
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K++ + +E DP E++A+K++LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANF
Sbjct: 236 KDVEELRDEAEEDPAEIEAAKHSLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANF 295
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG +E + AF++I SD NV+ ILVN+FGGI+ C IA+G+V A + L +PLV
Sbjct: 296 LDVGGGATKERVTAAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVHLHVPLV 355
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACK 430
VRLEGTNV+ GK+IL ES LP++ A +L +AA +V A K
Sbjct: 356 VRLEGTNVELGKKILSESGLPILSADNLADAADKVVKAVK 395
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV+ GK+IL ES LP++ A +L +AA+ + A
Sbjct: 338 AEGVVAAAREVHLHVPLVVRLEGTNVELGKKILSESGLPILSADNLADAADKVVKA 393
>gi|323137594|ref|ZP_08072671.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
49242]
gi|322397220|gb|EFX99744.1| succinyl-CoA synthetase, beta subunit [Methylocystis sp. ATCC
49242]
Length = 398
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 235/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F G + GV ++++ ++M+G L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGKFKEDSAGPQGGVRIAKSIEEAEAFAKQMLGATLVTLQTGDAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + I +E Y ++ DR + ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYIEDGAAIDKEFYLSMLIDRATSRIAFVVSTEGGMDIEKVAHDTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + IAD L +GDL +A GDL
Sbjct: 163 TGLMPHHGRHIADALGLKGDLAKQA--------------------------GDL------ 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+KL+ F++ D LEINPL+ T + ++ +DAK++F++NA +R ++ ++SE D
Sbjct: 191 -AEKLYAAFVAKDMELLEINPLIVTKDGKLRCLDAKVSFENNALYRHPDVAELRDLSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG E +
Sbjct: 250 EKEIEASKHDLAYISLDGNIGCMVNGAGLAMATMDIIKLYGAFPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C TIA+G++ A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDTIAEGVIAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I++ES L +I A DLD+AA +V A K+
Sbjct: 370 IINESGLNVIPADDLDDAAQKIVGAIKA 397
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVDLGKKIINESGLNVIPADDLDDAAQKIVGA 394
>gi|399991576|ref|YP_006571816.1| succinyl-CoA ligase subunit beta [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398656131|gb|AFO90097.1| succinyl-CoA ligase [ADP-forming] subunit beta [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 397
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 172/405 (42%), Positives = 234/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 EDAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAADEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYLALLVDRQTSRVSFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + + +D G + IA L +G Q+
Sbjct: 146 VAEATPEKILSFSVDPATGYQAFHGRRIAFSLGLEG----------------------QQ 183
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
I + G +L+ F+ D LEINPL+ +D ++ +DAK+ FD NA
Sbjct: 184 IKQCVRLMG-----------QLYKAFVEKDMEMLEINPLIVSDSGDLKVLDAKVGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 VYRHADISELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+ GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVEAGKDIINTSGLDVIAADNLSDGAEKIVKAVKG 397
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEAGKDIINTSGLDVIAADNLSDGAEKIVKA 394
>gi|312096708|ref|XP_003148752.1| succinate-CoA ligase [Loa loa]
Length = 382
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 223/382 (58%), Gaps = 42/382 (10%)
Query: 16 VKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFT 75
V P S D++ N + + K+ V+KAQ+L GGRG G+F++G + GV
Sbjct: 42 VAPFGVSRSADEL--------YNEARKIGGKDLVVKAQVLTGGRGKGYFESGLEGGVQLV 93
Query: 76 NNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVV 135
+ ++ M+G K+ TKQT +G ++VM+ K + RE YF I DR GPV
Sbjct: 94 FSPEEAREKASMMLGSKIFTKQTGASGKLCDEVMICKRLFTRREFYFSITMDRHTGGPVA 153
Query: 136 IISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQK 195
I S GG +IE VAAK P + PID+ G+ ++ A IAD +
Sbjct: 154 IGSSKGGVNIEEVAAKDPKAIVKCPIDIFDGMKDAEASSIADRMG--------------- 198
Query: 196 LWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVI 255
F+ DLK +AA +KL+NLF+ DAT +EINP+ E ++
Sbjct: 199 ------------------FKDDLKIQAANIFKKLYNLFIKYDATLIEINPMAEDINGKLY 240
Query: 256 SVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAM 315
+D K+N D NA +RQ +F+ + + DP E A+K +LNY+ +DGNIGC+VNGAGLAM
Sbjct: 241 CLDCKLNIDSNASYRQAELFAMEDKQQQDPLESRAAKADLNYIRLDGNIGCMVNGAGLAM 300
Query: 316 ATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSN-VKCILVNVFGGIVNCATIA 374
ATMDIIKLHGG+PANFLDVGGG E + +AFRII++D + V ILVN+FGGI+ C IA
Sbjct: 301 ATMDIIKLHGGDPANFLDVGGGATAEQVAEAFRIITADKDKVNAILVNIFGGIMRCDVIA 360
Query: 375 KGLVNACKSFKLSIPLVVRLEG 396
+G++ A +L +P+VVRL+G
Sbjct: 361 QGMITAISELQLKVPVVVRLQG 382
>gi|149185337|ref|ZP_01863654.1| succinyl-CoA synthetase, beta subunit [Erythrobacter sp. SD-21]
gi|148831448|gb|EDL49882.1| succinyl-CoA synthetase, beta subunit [Erythrobacter sp. SD-21]
Length = 399
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 228/384 (59%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F + GV + ++ D+ ++M+G+ L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDARGGVRLSKSIDDVEANAKEMLGNTLVTIQTGDEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y ++ DR +I S GG DIE+VA +TP + TI ID
Sbjct: 103 VNRLYVTDGVDIEKEYYLSMLVDRATGRVAMIASTEGGMDIEDVAHETPEKITTITIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
QG F+ + +A L+ GD +
Sbjct: 163 QG---------------------------------FMPHHGRAVAFALKLTGDTNKQCQK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+ F+ +D LEINPLVE E ++ +D K++FD N+ +R K++ + + +E D
Sbjct: 190 LAKQLYTAFMDLDMEMLEINPLVEDKEGNLLVLDTKMSFDGNSLYRHKDVEAMRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P EV+AS+Y+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG E +
Sbjct: 250 PAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D V+ ILVN+FGGI+ C TIA+G+V A K L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIILKDPAVEGILVNIFGGIMRCDTIAEGIVVAAKEVDLDVPLVVRLEGTNVEKGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A DL +AA + A
Sbjct: 370 ILANSGLPIVPADDLGDAARKIVA 393
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV++GK IL S LP++ A DL +AA +
Sbjct: 339 AEGIVVAAKEVDLDVPLVVRLEGTNVEKGKDILANSGLPIVPADDLGDAARKIV 392
>gi|170747353|ref|YP_001753613.1| succinyl-CoA synthetase subunit beta [Methylobacterium
radiotolerans JCM 2831]
gi|170653875|gb|ACB22930.1| succinyl-CoA synthetase, beta subunit [Methylobacterium
radiotolerans JCM 2831]
Length = 398
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 230/392 (58%), Gaps = 36/392 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQ 97
K+L +V+K+QI AGGRG G F G K GV T ++ ++ +M+G L+T Q
Sbjct: 36 KELGGPVWVVKSQIHAGGRGKGTFKGAPEGAKGGVRVTKSIDEVKQFAGEMLGQTLVTIQ 95
Query: 98 TPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVK 157
T G VN++ + + I E Y ++ DR G ++S GG DIE VA TP +
Sbjct: 96 TGPAGKQVNRLYIEEGAQIAEEFYLSMLVDRATGGVAFVVSTEGGMDIEAVAHDTPEKIH 155
Query: 158 TIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD 217
TI +D G+ + G AKA L G
Sbjct: 156 TIAVDPATGV-----------MPHHGRAVAKA----------------------LGLSGA 182
Query: 218 LKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQ 277
+AA +KL+ F++ D + LEINPLV T + + +DAK+ FD NA +R +I +
Sbjct: 183 QAKEAAALTEKLYAAFVAKDMSLLEINPLVLTADGHLKCLDAKMAFDSNALYRHADIVAL 242
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
+ +E D +E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G EPANFLDVGGG
Sbjct: 243 RDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVGGG 302
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
+EE + AF+II++D NVK ILVN+FGGI+ C IA G++ A K+ L +PLVVRLEGT
Sbjct: 303 ASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVKAVGLQVPLVVRLEGT 362
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
NV++GK I+ S L +I A DLD+AA + A
Sbjct: 363 NVEQGKAIIRNSGLNVIPADDLDDAAQKIVAA 394
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K+ L +PLVVRLEGTNV++GK I+ S L +I A DLD+AA + A
Sbjct: 339 ANGVIAAVKAVGLQVPLVVRLEGTNVEQGKAIIRNSGLNVIPADDLDDAAQKIVAA 394
>gi|433772447|ref|YP_007302914.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium australicum
WSM2073]
gi|433664462|gb|AGB43538.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium australicum
WSM2073]
Length = 397
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 228/385 (59%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V ++ +M+GH L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGADAKGGVRLAKSVAEVVANANEMLGHTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIERELYLSILVDRSVGRIAFVVSTEGGMDIEGVAHDTPEKIITVAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T A+D+ + + D L+ GD T
Sbjct: 163 KGVT---AEDV------------------------------KALNDALKLDGDAARDGGT 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + + +DAK++FD+NA FR ++ + SE D
Sbjct: 190 LFPILYKAFVEKDMSLLEVNPLIVMKDGHLRVLDAKVSFDNNALFRHPDVLELRDTSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+ D VK IL+N+FGGI+ C IA+G++ A K L +PLVVRLEGTN + GK+
Sbjct: 310 AAFKIITRDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLKVPLVVRLEGTNAELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+++S L ++ A DLD+AA + A
Sbjct: 370 IINDSGLNVVSADDLDDAAKKIVAA 394
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTN + GK+I+++S L ++ A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNAELGKKIINDSGLNVVSADDLDDAAKKIVAA 394
>gi|114764881|ref|ZP_01444063.1| succinyl-CoA synthetase subunit beta [Pelagibaca bermudensis
HTCC2601]
gi|114542767|gb|EAU45790.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. HTCC2601]
Length = 397
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/404 (42%), Positives = 236/404 (58%), Gaps = 40/404 (9%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKM 88
DA+TA +L+ +V+KAQI AGGRG G F + G K GV +V++ +M
Sbjct: 30 DAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEHEAGEKGGVRLAKSVEEAADEANRM 86
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+GH L+T QT G VN++ + +IT E Y ++ DR+ + ++ S GG DIE V
Sbjct: 87 LGHTLVTHQTGPAGKQVNRIYIEDGSDITSEFYLALLVDRVTSRISIVCSTEGGMDIEEV 146
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
AA TP + + ID G + F G +++
Sbjct: 147 AASTPEKILSFSIDPAVG-----------YQGFHG----------------------RRV 173
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
A L G + + + L+ +F D LEINPL+ T E E+ +D K FD NA
Sbjct: 174 AFALGLEGKAVRQCSNLLGNLYRMFTDKDMEMLEINPLILTTEGEIKCLDCKAGFDSNAL 233
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+R +I + +E DP+E+ AS+++LNY+ +DG IGC+VNGAGLAMATMDIIKL+GGEP
Sbjct: 234 YRHPDIVGLRDETEEDPKELAASQHDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGGEP 293
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L +
Sbjct: 294 ANFLDVGGGATKEKVTEAFKIITSDDNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLQV 353
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
PLVVRLEGTNV GK+I++ES L +I A +L D A +V A K
Sbjct: 354 PLVVRLEGTNVDLGKKIINESGLDVIAADNLSDGAEKIVKAVKG 397
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV GK+I++ES L +I A +L + A + A
Sbjct: 339 AEGVIAAVKEVGLQVPLVVRLEGTNVDLGKKIINESGLDVIAADNLSDGAEKIVKA 394
>gi|225165681|ref|ZP_03727483.1| Succinate--CoA ligase (ADP-forming) [Diplosphaera colitermitum
TAV2]
gi|224800070|gb|EEG18497.1| Succinate--CoA ligase (ADP-forming) [Diplosphaera colitermitum
TAV2]
Length = 393
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/376 (43%), Positives = 228/376 (60%), Gaps = 35/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QI AGGRG G F +GFK GV F N D +KM G+ L+T QT G V+ V
Sbjct: 44 VVKSQIHAGGRGKGVFTDGFKGGVKFAQNKDDALEYAKKMFGNTLVTAQTGPAGRKVHTV 103
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ I E Y I+ DR + PV++ S GG +IE VA +TP + + ID G+
Sbjct: 104 YFTEACKIRNEYYLAILLDRTTSKPVIVASTEGGIEIEKVAKETPDKIFKVLIDPAFGL- 162
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKL-WNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
ADF EV++L ++L L+ K AA ++
Sbjct: 163 -------ADF-------------EVRELIFDLGLNPAESK-------------NAAKLIK 189
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ +F DA+ +E+NPLV T + +V+++DAK++FDDNA FR I + +++E DP+E
Sbjct: 190 NLYQMFWETDASMVEVNPLVTTMDDQVLALDAKVSFDDNALFRHPEIVAYRDLNEEDPKE 249
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK+NL+Y+ +DGNI CLVNGAGLAM+TMDIIK +GG PANFLDVGGG +E ++ AF
Sbjct: 250 IEASKFNLSYIALDGNIACLVNGAGLAMSTMDIIKHYGGNPANFLDVGGGATKEQVVAAF 309
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II D NVK I VN+FGGI++C IA G+V A K L +PLVVRLEG NV GK L
Sbjct: 310 KIILGDKNVKGIFVNIFGGIMDCNVIATGIVEAVKETGLKLPLVVRLEGNNVAAGKATLA 369
Query: 408 ESKLPLIFASDLDEAA 423
S L ++ + +AA
Sbjct: 370 SSGLTIVSGDSMADAA 385
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEG NV GK L S L ++ + +AA +
Sbjct: 336 ATGIVEAVKETGLKLPLVVRLEGNNVAAGKATLASSGLTIVSGDSMADAAQKIV 389
>gi|398377057|ref|ZP_10535236.1| succinyl-CoA synthetase, beta subunit [Rhizobium sp. AP16]
gi|397727258|gb|EJK87685.1| succinyl-CoA synthetase, beta subunit [Rhizobium sp. AP16]
Length = 398
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 239/411 (58%), Gaps = 37/411 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDI 81
D V + A A K L YV+K+QI AGGRG G F + K GV +++D+
Sbjct: 20 ADGVAIFSADEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFKELSSDAKGGVRLAKSIEDV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ M+G+ L+TKQT G VN++ + +I RE Y I+ DR ++S G
Sbjct: 80 VANSKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA TP + T+ ID G+T + + I+D L+ +G + A KL+ +
Sbjct: 140 GMDIETVAHDTPEKIITVAIDPAAGVTAADSTAISDALKLEGAAREDGA----KLFPI-- 193
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L+ F+ D LE+NPL+ + +DAK+
Sbjct: 194 ---------------------------LYKAFVEKDMALLEVNPLIVMTNGRLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR ++I + + SE D +E+ A +Y+L YV +DGNIGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHEDIRALRDKSEEDEKEIQAHEYDLAYVALDGNIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANFLDVGGG +E + AF+II++D V+ ILVN+FGGI+ C IA+G++ A
Sbjct: 287 KLYGAEPANFLDVGGGATKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVLAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA +V A K
Sbjct: 347 KEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKAVKG 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKA 394
>gi|194379366|dbj|BAG63649.1| unnamed protein product [Homo sapiens]
Length = 329
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/339 (47%), Positives = 213/339 (62%), Gaps = 33/339 (9%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
MIG KL TKQT + G N+V+V + RE YF I +R GPV+I S GG +IE+
Sbjct: 1 MIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIED 60
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA+TP + PID+ +GI + A LAQK
Sbjct: 61 VAAETPEAIIKEPIDIEEGIKKEQAL-----------------------------QLAQK 91
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+ F ++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+
Sbjct: 92 MG----FPPNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNS 147
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+RQK IF + ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG
Sbjct: 148 AYRQKKIFDLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGT 207
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++
Sbjct: 208 PANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIK 267
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
IP+VVRL+GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 268 IPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMV 306
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 254 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 307
>gi|148260623|ref|YP_001234750.1| succinyl-CoA synthetase subunit beta [Acidiphilium cryptum JF-5]
gi|326403817|ref|YP_004283899.1| succinyl-CoA ligase subunit beta [Acidiphilium multivorum AIU301]
gi|189046870|sp|A5FYZ9.1|SUCC_ACICJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|146402304|gb|ABQ30831.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Acidiphilium
cryptum JF-5]
gi|325050679|dbj|BAJ81017.1| succinyl-CoA ligase beta subunit [Acidiphilium multivorum AIU301]
Length = 398
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 236/384 (61%), Gaps = 35/384 (9%)
Query: 48 YVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
YV+K+QI AGGRG GHF D K GV + +++ E M+G+ L+TKQT G V
Sbjct: 43 YVVKSQIHAGGRGAGHFKDDPEGKGGVRLAKSPEEVAAAAEAMLGNTLVTKQTGPAGRVV 102
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+V V +I RE Y ++ DR + V++ S GG +IE VA K P + + +D
Sbjct: 103 RRVYVEAGCDIKRELYLSLLVDRAKSEIVIMASTEGGMEIEEVAEKHPEKILRVAVDPAS 162
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI+ A+ + + L L A ++ F +F
Sbjct: 163 GISGFHARRLG--------------------FGLGLD--ATQMKAFAKF----------- 189
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
V ++ F+++D +EINPLV T EV+++DAK++FDDNA +R ++ + +E DP
Sbjct: 190 VNAMYKAFVALDCAIVEINPLVVTGAGEVVALDAKVSFDDNALYRHPDLEKLRDEAEEDP 249
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
+E++A+K++LNYV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +E +
Sbjct: 250 KELEAAKHSLNYVALDGSIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKERVTA 309
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+II SD NV+ ILVN+FGGI+ C IA+G+V A + LS+PLVVRLEGTNVQ GK I
Sbjct: 310 AFKIILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLSVPLVVRLEGTNVQLGKDI 369
Query: 406 LDESKLPLIFASDLDEAASLVNAC 429
L +S LP+I A +L +AA + A
Sbjct: 370 LSKSGLPIIAADNLADAAQKIVAA 393
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + LS+PLVVRLEGTNVQ GK IL +S LP+I A +L +AA + A
Sbjct: 338 AEGVVAAAREVSLSVPLVVRLEGTNVQLGKDILSKSGLPIIAADNLADAAQKIVAA 393
>gi|381168584|ref|ZP_09877778.1| succinyl-CoA synthetase, beta subunit [Phaeospirillum molischianum
DSM 120]
gi|380682444|emb|CCG42596.1| succinyl-CoA synthetase, beta subunit [Phaeospirillum molischianum
DSM 120]
Length = 398
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/398 (41%), Positives = 240/398 (60%), Gaps = 36/398 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
A + + L +V+KAQI AGGRG GHF D+ K GV +++++ + ++G L
Sbjct: 31 AGQVAETLGGPVWVVKAQIHAGGRGKGHFLGDSSGKGGVRVVKSIKEVEETVNAIMGKVL 90
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+T QT G V +V V + +I RE Y ++ DR + ++ S GG +IE VAA P
Sbjct: 91 VTAQTGPAGREVKRVYVEQGCDIKRELYLGMLIDRATSRITIMASTEGGMEIEEVAATHP 150
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + ID QG + IA L +G +++ ++
Sbjct: 151 EKITKVAIDPVQGFQAYHGRQIAFSLGLEG----------------------KQVNSAVK 188
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
F G L+ F+ +D + EINPLV + + +VI++DAKINFDDNA FR K
Sbjct: 189 FIG-----------ALYKAFVDLDMSIAEINPLVVSGDGDVIALDAKINFDDNALFRHKE 237
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
+ + +E DP E++A++++LNY+ +DG+IGC+VNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 238 VEELRDEAEEDPAELEAARHSLNYIKLDGSIGCMVNGAGLAMATMDIIKLYGGSPANFLD 297
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF++I SD NV+ ILVN+FGGI+ C IA+G++ A + L++PLVVR
Sbjct: 298 VGGGATKERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVIAAAREVSLNVPLVVR 357
Query: 394 LEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
LEGTNV+ GK+I+ +S LP+I A +L D A +V A K
Sbjct: 358 LEGTNVELGKKIMAQSGLPIIAADNLADAAEKVVKAVK 395
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + L++PLVVRLEGTNV+ GK+I+ +S LP+I A +L +AA + A
Sbjct: 338 AEGVIAAAREVSLNVPLVVRLEGTNVELGKKIMAQSGLPIIAADNLADAAEKVVKA 393
>gi|83950440|ref|ZP_00959173.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
gi|83838339|gb|EAP77635.1| succinyl-CoA synthetase subunit beta [Roseovarius nubinhibens ISM]
Length = 397
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 242/423 (57%), Gaps = 42/423 (9%)
Query: 15 LVKPVSTVHSTDKVCL--EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFK 69
L++ S +V L E+A+TA +++ +V+KAQI AGGRG G F G
Sbjct: 11 LLRSYGAPVSDGRVVLRAEEAKTAAG---EMDGPLWVVKAQIHAGGRGKGSFKEAGAGEA 67
Query: 70 SGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRL 129
GV +V++ ++M+G L+TKQT G VN++ + I +E Y ++ DR
Sbjct: 68 GGVRLAKSVEEAAEEAKRMLGRTLVTKQTGPAGKQVNRIYIEDGSGIEKEFYLALLVDRQ 127
Query: 130 HNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKA 189
+ + S GG DIE VA TP + + +D G + F G
Sbjct: 128 TSRVSFVASTEGGMDIEEVAESTPEKILSFSVDPATG-----------YQPFHG------ 170
Query: 190 ATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET 249
++IA L G + + + L+ +FL D LEINPL+ T
Sbjct: 171 ----------------RRIAFNLGLEGKQVKQCVSLMGTLYKMFLEKDMEMLEINPLIIT 214
Query: 250 DEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVN 309
D ++ +DAK+ FD NA +R +I + +E DP+E++ASKY+LNY+ +DG IGC+VN
Sbjct: 215 DAGDLKCLDAKMGFDGNAIYRHADIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVN 274
Query: 310 GAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVN 369
GAGLAMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+
Sbjct: 275 GAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMR 334
Query: 370 CATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNA 428
C IA+G+V A K L +PLVVRLEGTNV+EGK I++ S + +I A DL D A +V A
Sbjct: 335 CDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSDVDVIAADDLKDGAEKIVKA 394
Query: 429 CKS 431
K
Sbjct: 395 VKG 397
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+EGK I++ S + +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSDVDVIAADDLKDGAEKIVKA 394
>gi|85706368|ref|ZP_01037462.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
gi|85669141|gb|EAQ24008.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
Length = 397
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/423 (41%), Positives = 242/423 (57%), Gaps = 42/423 (9%)
Query: 15 LVKPVSTVHSTDKVCL--EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFK 69
L++ S +V L E+A+TA L + +V+KAQI AGGRG G F G K
Sbjct: 11 LLRSYGAPVSEGRVVLRGEEAKTAAGAL---DGPVWVVKAQIHAGGRGKGKFKEAGAGEK 67
Query: 70 SGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRL 129
GV +V + ++M+G L+T QT G VN++ + +I RE Y ++ DR
Sbjct: 68 GGVRIAKSVNEAAEEAKRMLGRTLVTHQTGPAGKQVNRIYIEDGSSIARELYLALLIDRQ 127
Query: 130 HNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKA 189
+ + S GG DIE VAA+TP + + +D G ++ F G
Sbjct: 128 TSRISFVCSTEGGMDIEEVAAETPEKILSFAVDPATG-----------YMPFHG------ 170
Query: 190 ATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET 249
++IA L G + + + L+ F+ D LEINPL+ T
Sbjct: 171 ----------------RRIAFALGLTGGQIKQCVSLMGILYRAFVEKDMEMLEINPLIVT 214
Query: 250 DEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVN 309
+++ +DAK+ FD NA +R +I + SE DP+E++ASKY+LNY+ +DG IGC+VN
Sbjct: 215 TSGDLMVLDAKLGFDGNAVYRHPDIAELRDTSEEDPKELEASKYDLNYIALDGEIGCMVN 274
Query: 310 GAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVN 369
GAGLAMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+
Sbjct: 275 GAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMR 334
Query: 370 CATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNA 428
C IA+G+V A K L +PLVVRLEGTNV++GK I++ S L +I A DL D A +V A
Sbjct: 335 CDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKA 394
Query: 429 CKS 431
K
Sbjct: 395 VKG 397
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKA 394
>gi|338980887|ref|ZP_08632133.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Acidiphilium sp.
PM]
gi|338208200|gb|EGO96082.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Acidiphilium sp.
PM]
Length = 398
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 236/384 (61%), Gaps = 35/384 (9%)
Query: 48 YVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
YV+K+QI AGGRG GHF D K GV + +++ E M+G+ L+TKQT G V
Sbjct: 43 YVVKSQIHAGGRGAGHFKDDPEGKGGVRLAKSPEEVAAAAEAMLGNTLVTKQTGPAGRVV 102
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
+V V +I RE Y ++ DR + V++ S GG +IE VA K P + + +D
Sbjct: 103 RRVYVEAGCDIKRELYLSLLVDRAKSEIVIMASTEGGMEIEEVAEKHPEKILRVAVDPAS 162
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI+ A+ + + L L A ++ F +F
Sbjct: 163 GISGFHARRLG--------------------FGLGLD--ATQMKAFAKF----------- 189
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
V ++ F+++D +EINPLV T EV+++DAK++FDDNA +R ++ + +E DP
Sbjct: 190 VNAMYKAFVALDCAIVEINPLVVTGAGEVVALDAKVSFDDNALYRHPDLEKLRDEAEEDP 249
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
+E++A+K++LNYV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +E +
Sbjct: 250 KELEAAKHSLNYVALDGSIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKERVTA 309
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+II SD NV+ ILVN+FGGI+ C IA+G+V A + LS+PLVVRLEGTNVQ GK I
Sbjct: 310 AFKIILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLSVPLVVRLEGTNVQLGKDI 369
Query: 406 LDESKLPLIFASDLDEAASLVNAC 429
L +S LP+I A +L +AA + A
Sbjct: 370 LSKSGLPIIAADNLADAAQKIVAA 393
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + LS+PLVVRLEGTNVQ GK IL +S LP+I A +L +AA + A
Sbjct: 338 AEGVVAAAREVSLSVPLVVRLEGTNVQLGKDILSKSGLPIIAADNLADAAQKIVAA 393
>gi|42521007|ref|NP_966922.1| succinyl-CoA synthetase subunit beta [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|81652161|sp|Q73FW3.1|SUCC_WOLPM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|42410748|gb|AAS14856.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 383
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 236/395 (59%), Gaps = 50/395 (12%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ +T + LK F V+KAQI AGGRG GV +V++ ++ MIG
Sbjct: 29 EEVKTQVSQLKSDVF---VVKAQIHAGGRGKA-------GGVKLAKSVEEAQQFVKDMIG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT +G V KV V + +I +E Y +V D + P+ I S GG DIE VA
Sbjct: 79 MTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAK 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQ--KI 208
+P A ++F D+ + + KL + F S Q KI
Sbjct: 139 NSP----------------------AKIVKF--DIDPATSFDSSKLSSRFHLSPEQIEKI 174
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
++ +K+++ F++ DA+Q+EINPLVET+ + I++DAKINFDDNA
Sbjct: 175 SNI--------------AKKIYDAFIATDASQIEINPLVETNSGDFIALDAKINFDDNAL 220
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+R I + E E++ASKY L+Y+ MDG+IGC+VNGAGLAMATMDIIK +G EP
Sbjct: 221 YRHPEIMELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEP 280
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG ++E++ +AF+II SDSNVK ILVN+FGGI+ C IA G+V A K + +
Sbjct: 281 ANFLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKV 340
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRL GTN +EGK+IL+ES L +I A +LDEAA
Sbjct: 341 PLVVRLSGTNFEEGKKILEESGLNIIAADELDEAA 375
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN +EGK+IL+ES L +I A +LDEAA +
Sbjct: 326 ASGIVAAAKEMSIKVPLVVRLSGTNFEEGKKILEESGLNIIAADELDEAAQKIV 379
>gi|332186916|ref|ZP_08388657.1| succinate-CoA ligase, beta subunit [Sphingomonas sp. S17]
gi|332012926|gb|EGI54990.1| succinate-CoA ligase, beta subunit [Sphingomonas sp. S17]
Length = 399
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/384 (43%), Positives = 224/384 (58%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++ M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKTAEEVRAHATDMLGNTLVTIQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y ++ +R ++ S GG DIE VA TP + +I ID
Sbjct: 103 VNRLYVTDGVDIAKEFYLALLVNRATGRVSMVASTEGGMDIETVAHDTPEKIHSIDIDTA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A LE GDL +AA KL+ FL +
Sbjct: 163 TGFMPHHGRAVAAALELTGDLAKQAANVASKLYAAFLGT--------------------- 201
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
DA Q+EINPL T++ +++ +DAK+ FD NA FR K++ + +E D
Sbjct: 202 ------------DAEQIEINPLAVTEDGKLMVLDAKVGFDGNAMFRHKDLMELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 AMELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II SD VK ILVN+FGGI+ C IA G+V A K L +PLVVRLEGTNV++GK
Sbjct: 310 AAFKIILSDPAVKGILVNIFGGIMRCDIIADGIVAAAKEVNLQVPLVVRLEGTNVEKGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S L ++ A+DL +AA + A
Sbjct: 370 ILANSGLAIVPANDLGDAAKKIVA 393
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV++GK IL S L ++ A+DL +AA +
Sbjct: 339 ADGIVAAAKEVNLQVPLVVRLEGTNVEKGKEILANSGLAIVPANDLGDAAKKIV 392
>gi|84500186|ref|ZP_00998452.1| succinyl-CoA synthase, beta subunit [Oceanicola batsensis HTCC2597]
gi|84392120|gb|EAQ04388.1| succinyl-CoA synthase, beta subunit [Oceanicola batsensis HTCC2597]
Length = 397
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 174/418 (41%), Positives = 241/418 (57%), Gaps = 42/418 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHF 74
PVS + K E+A+TA +L+ +V+KAQI AGGRG G F D G K GV
Sbjct: 18 PVSDGRAVLKA--ENAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
+V++ +KM+G L+T QT G VN++ + +I RE Y ++ DR +
Sbjct: 73 AKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSDIERELYLALLVDRQTSAVS 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
++ S GG DIE VAA TP + + I+ G + +A L +G +V+
Sbjct: 133 IVCSTEGGMDIEEVAASTPEKILSFSIEPATGYQPFHGRRVAFALGMEG-------PQVK 185
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
++ L KL+ F D LEINPL+ + +
Sbjct: 186 QMVQLL--------------------------DKLYRAFTEKDMEMLEINPLIVMPDGNL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+DAK+ FD NA +R +I + + +E DP+E+ ASKY+LNY+ +DG IGC+VNGAGLA
Sbjct: 220 KVLDAKVGFDGNALYRHNDIIALRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA
Sbjct: 280 MATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+G+V A K L +PLVVRLEGTNV++GK I++ S L +I A +L D A +V A K
Sbjct: 340 EGVVAAVKEVGLEVPLVVRLEGTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKAVKG 397
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLEVPLVVRLEGTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKA 394
>gi|397677456|ref|YP_006518994.1| succinyl-CoA ligase subunit beta [Zymomonas mobilis subsp. mobilis
ATCC 29191]
gi|395398145|gb|AFN57472.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Zymomonas mobilis
subsp. mobilis ATCC 29191]
Length = 398
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 173/415 (41%), Positives = 238/415 (57%), Gaps = 38/415 (9%)
Query: 17 KPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFK--SGVHF 74
+ VS V +E+A A + L+ YVIK+QILAGGRG G+F K GV
Sbjct: 15 RGVSVVPGYMAANVEEAVKAA---EQLSSPPYVIKSQILAGGRGKGYFRESPKEGGGVRL 71
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
+++ + E M+G L+T QT GI V K+++ ++V+I RE Y ++ DR
Sbjct: 72 VSDIAAVKKQAESMLGRHLVTAQTDDQGIPVEKLLITEAVSIAREFYLSLLVDRQTGRVT 131
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
+ SP GG DIE VA + P + I ID G + I L GD+
Sbjct: 132 FVASPEGGMDIETVAKEKPEAIHRIAIDPATGFQPHHGRMIGFALGLSGDV--------- 182
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
F+ +K A+ L+ F + D + LEINPLVET++ ++
Sbjct: 183 -------------------FKQGIKLAAS-----LYKAFTTSDMSLLEINPLVETNDGKL 218
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+ VDAKI+FDDNA FR +I + E SD E +A + L+Y+ +DG+IGC+VNGAGLA
Sbjct: 219 LPVDAKISFDDNALFRHPDIAALGEAGASDLLEQEARQAGLSYIKLDGSIGCMVNGAGLA 278
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
M TMDII+LHG PANFLDVGGG ++E + AFRII SD +VK ILVN+FGGI+ C +A
Sbjct: 279 MGTMDIIQLHGEMPANFLDVGGGASKEKVAAAFRIILSDPSVKGILVNIFGGIMRCDILA 338
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
+G++ A + +++PLVVRLEG NV EGK L S LP+I ASDL +AA + A
Sbjct: 339 EGIIAAARELDITVPLVVRLEGNNVNEGKAALVSSGLPIITASDLGDAAQKIVAA 393
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + +++PLVVRLEG NV EGK L S LP+I ASDL +AA + A
Sbjct: 338 AEGIIAAARELDITVPLVVRLEGNNVNEGKAALVSSGLPIITASDLGDAAQKIVAA 393
>gi|335420352|ref|ZP_08551390.1| succinyl-CoA synthetase subunit beta [Salinisphaera shabanensis
E1L3A]
gi|334894711|gb|EGM32896.1| succinyl-CoA synthetase subunit beta [Salinisphaera shabanensis
E1L3A]
Length = 417
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 160/396 (40%), Positives = 230/396 (58%), Gaps = 40/396 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L ++V+KAQ+ AGGRG GV ++V ++ MIG +
Sbjct: 58 ADEAVEAAKSLGGDKWVVKAQVHAGGRGKA-------GGVKICSSVDEVKQAAADMIGGE 110
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQT G+ +N V V K +I E Y ++ DR I SP GG DIE VA T
Sbjct: 111 LKTKQTGDVGLPINSVYVEKPADIESELYLSVLVDRATRRVTFIASPEGGMDIEEVAEST 170
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + + I A F +QG + FL +++ +F+
Sbjct: 171 PEKITQVAI-----------HPAAGFQAYQG-----------RQLGFFLGLDKKQVGEFV 208
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ ++ L+ +F+ DA+ +EINPLV T + ++++D K+NFDDNA FR K
Sbjct: 209 KV-----------MKGLYEMFVECDASLVEINPLVTTKQGGLVALDGKLNFDDNALFRHK 257
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++++ + RE A++++LNY+ +DGNIGC+VNGAGLAM TMD++KLHGGEPANFL
Sbjct: 258 EFADMRDLTQENEREAQAAEHDLNYIQLDGNIGCMVNGAGLAMGTMDLVKLHGGEPANFL 317
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF++I++ VK ILVN+FGGIV C IA+G++ A K +S+P+VV
Sbjct: 318 DVGGGATTERVTEAFKLITAGEGVKAILVNIFGGIVRCDLIAEGIITAAKDVGISVPVVV 377
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
RLEGTN +EG+++L+ES LI A DL +AA V A
Sbjct: 378 RLEGTNAEEGRKLLEESDFDLIAAQDLTDAAKKVVA 413
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K +S+P+VVRLEGTN +EG+++L+ES LI A DL +AA +
Sbjct: 359 AEGIITAAKDVGISVPVVVRLEGTNAEEGRKLLEESDFDLIAAQDLTDAAKKVV 412
>gi|56695262|ref|YP_165610.1| succinyl-CoA synthetase subunit beta [Ruegeria pomeroyi DSS-3]
gi|56676999|gb|AAV93665.1| succinyl-CoA synthase, beta subunit [Ruegeria pomeroyi DSS-3]
Length = 397
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 234/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 EDAKTAAG---ELDGPLWVVKAQIHAGGRGKGKFKEADAGEKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I RE Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPVGKQVNRIYIEAGSGIERELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D + + + G ++
Sbjct: 146 VAASTPEKILSFSVD-----------PVTGYQPYHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L G + + L+ F+ D LEINPL+ + + +DAK+ FD NA
Sbjct: 173 IAFSLGLEGPQVKQCVALMGLLYKAFVEKDMEMLEINPLIVAEGGSLKVLDAKVGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHSDIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKAVKG 397
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVEKGKEIINTSGLNVIAADNLSDGAEKIVKA 394
>gi|418053710|ref|ZP_12691766.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Hyphomicrobium
denitrificans 1NES1]
gi|353211335|gb|EHB76735.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Hyphomicrobium
denitrificans 1NES1]
Length = 399
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 232/391 (59%), Gaps = 36/391 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A K L +V+KAQI AGGRG G F G K GV ++ ++ E+M+G
Sbjct: 31 AVEAAKKLPGPVWVVKAQIHAGGRGKGKFLESSAGDKGGVRLAKSIDEVKAFAEQMLGKT 90
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LIT QT G VN++ + I RE Y + DR + I+S +GG +IE+VA +T
Sbjct: 91 LITVQTGNAGRIVNRLYIEDGSAIERELYLSALVDRASSRVAFIVSQAGGMNIEDVAHET 150
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T+ ID G + F G +K+A L
Sbjct: 151 PEKIHTLTIDPATG-----------YQPFHG----------------------RKVAFAL 177
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+GD A+ VQ L+ + + D + LEINPLV T + ++I +D K+NFD NA +R
Sbjct: 178 GLKGDQVKAASNLVQNLYRMVVEKDMSLLEINPLVVTKDGKLICLDGKMNFDSNALYRHP 237
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
I + ++SE DP EV+ASK++L +V +DG+IGCLVNGAGLAMATMDIIKL+G EPANFL
Sbjct: 238 EIVALRDLSEEDPTEVEASKHDLAFVKLDGDIGCLVNGAGLAMATMDIIKLYGAEPANFL 297
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG ++E + +AF+II +D VK ILVN+FGGI+ C IA+G++ A + + +PLVV
Sbjct: 298 DVGGGASKEKVREAFKIILADPAVKGILVNIFGGIMRCDIIAEGVIAAAREMDIKVPLVV 357
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L +I A DL +AA
Sbjct: 358 RLEGTNVDLGKKILKESGLKIIPADDLADAA 388
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + + +PLVVRLEGTNV GK+IL ES L +I A DL +AA
Sbjct: 339 AEGVIAAAREMDIKVPLVVRLEGTNVDLGKKILKESGLKIIPADDLADAA 388
>gi|261315030|ref|ZP_05954227.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis
M163/99/10]
gi|261304056|gb|EEY07553.1| succinyl-CoA ligase subunit beta [Brucella pinnipedialis
M163/99/10]
Length = 375
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/365 (43%), Positives = 226/365 (61%), Gaps = 36/365 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ ++M+G+ L+TKQT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T+ A +AD L+ +G A + KL+ +
Sbjct: 163 KGVTDEDANKLADALKLEGG----AREDGLKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ V +DAK++FD+NA FR +I +++E D
Sbjct: 194 ----LYKAFTEKDMSLLEINPLIVMTNGRVRVLDAKVSFDNNALFRHPDIVELRDLTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPAVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDES 409
I++ES
Sbjct: 370 IINES 374
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDES 505
A ++ A K L +PLVVRLEGTNV+ GK+I++ES
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINES 374
>gi|347739422|ref|ZP_08870695.1| succinyl-CoA synthetase beta chain [Azospirillum amazonense Y2]
gi|346917289|gb|EGX99712.1| succinyl-CoA synthetase beta chain [Azospirillum amazonense Y2]
Length = 398
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/403 (44%), Positives = 241/403 (59%), Gaps = 39/403 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKM 88
E+A+T + DL +V+K+QI AGGRG G F K GV ++ D+ ++M
Sbjct: 29 EEAKT---VATDLGGPVWVVKSQIHAGGRGAGRFKENPEGKGGVRVVKSIDDVVSNAKEM 85
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+GH L+TKQT G V ++ V + +I RE Y ++ DR + VI S GG +IE V
Sbjct: 86 LGHTLVTKQTGPEGKEVKRLYVEEGCDIKRELYLSLLLDRATSRVTVIASTEGGMEIEEV 145
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A P + + ID G+ A+ IA L+ +G A FLS++
Sbjct: 146 AHSHPEKIVKVAIDPVGGLQGYHARQIAFGLKLEGKQVGAAVK--------FLSAM---- 193
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
+ F+ +DA+Q+EINPLV T EVI++DAK+NFDDNA
Sbjct: 194 ---------------------YKAFVELDASQVEINPLVVTGAGEVIALDAKMNFDDNAL 232
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+R K+I + SE + E +A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEP
Sbjct: 233 YRHKDIEELRDESEEEASETEATKHGLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEP 292
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG E + AF++I SD NV+ ILVN+FGGI+ C IA+G+V A + L +
Sbjct: 293 ANFLDVGGGATRERVTTAFKLILSDPNVEGILVNIFGGIMRCDVIAEGVVAAAREVSLHV 352
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
PLVVRLEGTNV+ GK+IL ES LP++ A +L D A +V A K
Sbjct: 353 PLVVRLEGTNVELGKKILAESGLPILSADNLADAAEKIVKAVK 395
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV+ GK+IL ES LP++ A +L +AA + A
Sbjct: 338 AEGVVAAAREVSLHVPLVVRLEGTNVELGKKILAESGLPILSADNLADAAEKIVKA 393
>gi|110635724|ref|YP_675932.1| succinyl-CoA synthetase subunit beta [Chelativorans sp. BNC1]
gi|123353105|sp|Q11CV8.1|SUCC_MESSB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|110286708|gb|ABG64767.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chelativorans
sp. BNC1]
Length = 397
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 233/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +++++ ++M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ I
Sbjct: 103 VNRLYIEDGADIARELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + L+ G AA + + L+ +
Sbjct: 163 RGVTNDDVTKLNAALKLDG----AAAKDGETLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LE+NPL+ + +DAK++FD+NA FR +++ + SE D
Sbjct: 194 ----LYKAFTEKDMSLLEVNPLIVMQNGRLRVLDAKVSFDNNALFRHEDVVELRDTSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLIFASDLDEAA-SLVNACKS 431
I+ +S L +I A DLD+AA +V A KS
Sbjct: 370 IISQSGLNVIPADDLDDAAKKIVAAVKS 397
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV GK+I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVDLGKKIISQSGLNVIPADDLDDAAKKIVAA 394
>gi|421595413|ref|ZP_16039457.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp.
CCGE-LA001]
gi|404272478|gb|EJZ36114.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp.
CCGE-LA001]
Length = 398
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 235/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F G K GV + ++ ++M+G L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVTEFAKQMLGATLVTVQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y I+ DR + ++S GG +IE+VA TP + T +D
Sbjct: 103 VNRLYIEDGSDIDKEFYLSILVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A+ L+ GDL A + +KL
Sbjct: 163 TGIMGHHGRTVANALKLSGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L+ F++ D + LEINPLV T + ++ +DAK++FDDNA FR + + + +E D
Sbjct: 191 -TAQLYAAFIAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVLALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGSASKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+ A + LS+PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A +LD+AA +V A K
Sbjct: 370 IIRESGLNVVPADNLDDAAQKIVKAVKG 397
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A + A + LS+PLVVRLEGTNV+ GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVTAAVREVGLSVPLVVRLEGTNVELGKKIIRESGLNVVPADNLDDAAQKIVKA 394
>gi|222087461|ref|YP_002545998.1| succinyl-CoA synthetase subunit beta [Agrobacterium radiobacter
K84]
gi|254778424|sp|B9JCF4.1|SUCC_AGRRK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|221724909|gb|ACM28065.1| succinyl-CoA synthetase beta subunit protein [Agrobacterium
radiobacter K84]
Length = 397
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 238/411 (57%), Gaps = 37/411 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
D V + A A K L YV+K+QI AGGRG G F K GV +++D+
Sbjct: 20 ADGVAIFSADEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEDV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ M+G+ L+TKQT G VN++ + +I RE Y I+ DR ++S G
Sbjct: 80 VANSKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA TP + T+ ID G+T + + I+D L+ +G + A KL+ +
Sbjct: 140 GMDIETVAHDTPEKIITVAIDPAAGVTAADSTAISDALKLEGAAREDGA----KLFPI-- 193
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L+ F+ D LE+NPL+ + +DAK+
Sbjct: 194 ---------------------------LYKAFVEKDMALLEVNPLIVMTNGRLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR ++I + + SE D +E+ A +Y+L YV +DGNIGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHEDIRALRDKSEEDEKEIQAHEYDLAYVALDGNIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANFLDVGGG +E + AF+II++D V+ ILVN+FGGI+ C IA+G++ A
Sbjct: 287 KLYGAEPANFLDVGGGATKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVLAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA +V A K
Sbjct: 347 KEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKAVKG 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKA 394
>gi|13473641|ref|NP_105209.1| succinyl-CoA synthetase subunit beta [Mesorhizobium loti
MAFF303099]
gi|21264043|sp|Q98EC5.1|SUCC_RHILO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|14024391|dbj|BAB50995.1| succinyl-coA synthetase beta chain [Mesorhizobium loti MAFF303099]
Length = 397
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 226/385 (58%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V D+ +M+GH L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP V T+ ID
Sbjct: 103 VNRLYIEDGADIERELYLSILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKVITVAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T A D+ +K+ L+ GD T
Sbjct: 163 RGVT---ADDV------------------------------KKLNAALKLDGDAAKDGGT 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD+NA FR ++ + +E D
Sbjct: 190 LFPILYKAFIEKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVLELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+ D VK IL+N+FGGI+ C IA+G++ A K L +PLVVRLEGTN + GK+
Sbjct: 310 AAFKIITKDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLEVPLVVRLEGTNAELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+++S L ++ A DLD+AA + A
Sbjct: 370 IINDSGLNVVSADDLDDAAKKIVAA 394
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTN + GK+I+++S L ++ A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLEVPLVVRLEGTNAELGKKIINDSGLNVVSADDLDDAAKKIVAA 394
>gi|16124592|ref|NP_419156.1| succinyl-CoA synthetase subunit beta [Caulobacter crescentus CB15]
gi|221233279|ref|YP_002515715.1| succinyl-CoA synthetase subunit beta [Caulobacter crescentus
NA1000]
gi|21264045|sp|Q9AB94.1|SUCC_CAUCR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|254778434|sp|B8GYZ1.1|SUCC_CAUCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|13421486|gb|AAK22324.1| succinyl-CoA synthetase, beta subunit [Caulobacter crescentus CB15]
gi|220962451|gb|ACL93807.1| succinyl-CoA synthetase beta chain [Caulobacter crescentus NA1000]
Length = 399
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/390 (42%), Positives = 234/390 (60%), Gaps = 37/390 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F+ K GV +V+++ E+M+G L+T QT G
Sbjct: 43 FVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + I +E Y ++ DR + V+ S GG DIE+VA TP + T ID
Sbjct: 103 VNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ W +LA+ L G L +AA+
Sbjct: 163 TGV-----------------------------WPTHHRALAKA----LGLTGGLAKEAAS 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ +L+ F++ D LEINPL+ T + + +DAK++FD N+ FR +I + + SE D
Sbjct: 190 LLNQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFRHPDIKALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDL-DEAASLVNACKSFK 433
I+ ES L +I A+DL D A +V A K +
Sbjct: 370 IISESGLNVIAANDLSDGAEKIVAAVKGAR 399
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I+ ES L +I A+DL + A + A
Sbjct: 339 AEGVIAAVKEVGLQVPLVVRLEGTNVELGKKIISESGLNVIAANDLSDGAEKIVAA 394
>gi|146337550|ref|YP_001202598.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp. ORS 278]
gi|189046889|sp|A4YKC6.1|SUCC_BRASO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|146190356|emb|CAL74352.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. ORS 278]
Length = 398
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 240/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
EDA A K L +V+K+QI AGGRG G F G K GV ++ ++ +
Sbjct: 29 EDADAAA---KTLGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNTFARQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I +E Y ++ DR + ++S GG +IE+
Sbjct: 86 MLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + T +D G+ + +A L+ GDL A + +KL
Sbjct: 146 VAHETPEKIVTFSVDPATGVMGHHGRAVAKALKLSGDL----AKQAEKLTT--------- 192
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+N F++ D LEINPLV T + ++ +DAK++FD NA
Sbjct: 193 --------------------QLYNAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
F+ + + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LFKHPEVVALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGME 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKA 394
>gi|86138986|ref|ZP_01057557.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. MED193]
gi|85824217|gb|EAQ44421.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. MED193]
Length = 397
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 236/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
++A+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 DEAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEASEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPVGKQVNRIYIEAGSGIQTELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + IA L +G +
Sbjct: 146 VAAATPEKILSFSVDPATGYQAYHGRRIAFSLGLEG----------------------AQ 183
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
I ++ G +L+ F+ D LEINPL+ +D ++ +DAK++FD NA
Sbjct: 184 IKQCVKLMG-----------QLYQAFVEKDMEMLEINPLIVSDSGDIKVLDAKVSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R ++ + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHPDVAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+ GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVEAGKEIINTSGLDVIAADNLSDGAEKIVKAVKG 397
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVEAGKEIINTSGLDVIAADNLSDGAEKIVKA 394
>gi|254436507|ref|ZP_05050001.1| succinyl-CoA synthetase, beta subunit subfamily [Octadecabacter
antarcticus 307]
gi|198251953|gb|EDY76267.1| succinyl-CoA synthetase, beta subunit subfamily [Octadecabacter
antarcticus 307]
Length = 397
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/418 (42%), Positives = 241/418 (57%), Gaps = 42/418 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHF 74
PVS + K EDA+TA + +L+ +V+KAQI AGGRG GHF G GV
Sbjct: 18 PVSDGRAVLKA--EDAKTAAS---ELDGPLWVVKAQIHAGGRGKGHFKEAGAGEAGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
T +V + +KM+G L+T QT G VN+V + +I E Y ++ DR +
Sbjct: 73 TKSVGEAADEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGADIESEFYLALLVDRQTSRIG 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
++S GG DIE VAA TP + +D G + F G
Sbjct: 133 FVVSTEGGMDIEEVAANTPEKIINFTVDPATG-----------YQAFHG----------- 170
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
+++A L +G + + L+ F+ D LEINPL+ T+ ++
Sbjct: 171 -----------RRVAFTLGLKGQQVKQCVNLMGLLYKAFVEKDMEMLEINPLIVTNAGDL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+DAK++FD NA +R +I S + +E DP+E+ ASK++LNY+ +DG IGC+VNGAGLA
Sbjct: 220 KVLDAKVSFDGNAIYRHPDIASLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA
Sbjct: 280 MATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+G+V+A K L +PLVVRLEGTNV EGK I++ S L +I A DL D A +V A K
Sbjct: 340 EGVVSAVKEVGLKVPLVVRLEGTNVDEGKAIINNSGLDVIAADDLKDGAEKIVKAVKG 397
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K L +PLVVRLEGTNV EGK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVSAVKEVGLKVPLVVRLEGTNVDEGKAIINNSGLDVIAADDLKDGAEKIVKA 394
>gi|254476607|ref|ZP_05089993.1| succinyl-CoA synthetase, beta subunit [Ruegeria sp. R11]
gi|214030850|gb|EEB71685.1| succinyl-CoA synthetase, beta subunit [Ruegeria sp. R11]
Length = 397
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 233/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 EDAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEAGSGIQTELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + + +D G + F G ++
Sbjct: 146 VAEATPEKILSFSVDPATG-----------YQAFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L G + + +L+ F+ D LEINPL+ D+ + +DAK+ FD NA
Sbjct: 173 IAFSLGLEGAQVKQCVQLMGQLYKAFVEKDMEMLEINPLIIADDGNLKVLDAKVGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 VYRHADISELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+ GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVEAGKDIINNSGLDVIAADNLSDGAEKIVKAVKG 397
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEAGKDIINNSGLDVIAADNLSDGAEKIVKA 394
>gi|397689845|ref|YP_006527099.1| succinyl-CoA synthetase, beta subunit [Melioribacter roseus P3M]
gi|395811337|gb|AFN74086.1| succinyl-CoA synthetase, beta subunit [Melioribacter roseus P3M]
Length = 403
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/407 (42%), Positives = 238/407 (58%), Gaps = 40/407 (9%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNG-------FKSGVHFTNNVQDIP 82
L + A + LK ++V+K+QI AGGRG G N + GV FT + +
Sbjct: 28 LSELDKALSSLKAAGINQFVVKSQIHAGGRGKGKIYNADNRAELVLEGGVKFTKDENKVR 87
Query: 83 PILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGG 142
EKM+G+ L+T QT G V + + + ++ +E Y I+ DR + V++ S GG
Sbjct: 88 EYAEKMLGNILVTHQTGPEGKKVKTLYITEGLDYKKELYVGILLDRAVSKNVIMASTEGG 147
Query: 143 TDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLS 202
+IE VA +TP + + ID G F FQ Q + L L
Sbjct: 148 VEIEKVAEETPEKILKVWIDPAIG-----------FQPFQAR---------QLAFGLGLK 187
Query: 203 SLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKIN 262
A K +F+ F + KL+N + DA+ LEINPLV T++ +I++DAK+N
Sbjct: 188 GTAFK--NFIPF-----------IMKLYNAYEETDASLLEINPLVITNDDRIIALDAKMN 234
Query: 263 FDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIK 322
FDDNA +R I + ++ E DP E++ASKYNLNY+ +DGN+GC+VNGAGLAMATMDIIK
Sbjct: 235 FDDNALYRHPEIAAYRDLDEEDPLEIEASKYNLNYIKLDGNVGCMVNGAGLAMATMDIIK 294
Query: 323 LHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACK 382
L GGEPANFLDVGGG N+E++ F+II SD NVK IL+N+FGGIV C +A+G+++A K
Sbjct: 295 LAGGEPANFLDVGGGANKETVANGFKIILSDPNVKAILINIFGGIVRCDRVAQGVIDAVK 354
Query: 383 SFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
++IP+VVRLEGTN + +L +S L AS L EAA V A
Sbjct: 355 EVNVTIPVVVRLEGTNAYIAQDMLKKSGLNFEVASSLKEAAEKVTAV 401
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +++A K ++IP+VVRLEGTN + +L +S L AS L EAA
Sbjct: 346 AQGVIDAVKEVNVTIPVVVRLEGTNAYIAQDMLKKSGLNFEVASSLKEAA 395
>gi|99034389|ref|ZP_01314405.1| hypothetical protein Wendoof_01000792 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|225677209|ref|ZP_03788202.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590733|gb|EEH11967.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 383
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/393 (42%), Positives = 235/393 (59%), Gaps = 46/393 (11%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ +T + LK F V+KAQI AGGRG GV +V++ ++ MIG
Sbjct: 29 EEVKTQVSQLKSDVF---VVKAQIHAGGRGKA-------GGVKLAKSVEEAQQFVKDMIG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT +G V KV V + +I +E Y +V D + P+ I S GG DIE VA
Sbjct: 79 MTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAK 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P K + D+ + ++ + F + +++K+ N+
Sbjct: 139 NSP--AKIVKFDIDPATSFDSSKLSSSF--------HLSPEQIEKISNI----------- 177
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+K+++ F++ DA+Q+EINPLVET+ + I++DAKINFDDNA +R
Sbjct: 178 ---------------AKKIYDAFIATDASQIEINPLVETNSGDFIALDAKINFDDNALYR 222
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
I + E E++ASKY L+Y+ MDG+IGC+VNGAGLAMATMDIIK +G EPAN
Sbjct: 223 HPEIMELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPAN 282
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++E++ +AF+II SDSNVK ILVN+FGGI+ C IA G+V A K + +PL
Sbjct: 283 FLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPL 342
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRL GTN +EGK+IL+ES L +I A +LDEAA
Sbjct: 343 VVRLSGTNFEEGKKILEESGLNIIAADELDEAA 375
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN +EGK+IL+ES L +I A +LDEAA +
Sbjct: 326 ASGIVAAAKEMSIKVPLVVRLSGTNFEEGKKILEESGLNIIAADELDEAAQKIV 379
>gi|255263427|ref|ZP_05342769.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
gi|255105762|gb|EET48436.1| succinyl-CoA synthetase beta chain [Thalassiobium sp. R2A62]
Length = 397
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 235/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +L+ +V+KAQI AGGRG G F D G GV +V + +K
Sbjct: 29 EDAKTAAG---ELDGPLWVVKAQIHAGGRGKGKFKEADAGDAGGVRLAKSVAEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYLALLVDRQTSQISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA+TP + + +D G + + G ++
Sbjct: 146 VAAETPEKILSFSVDPAAG-----------YQAYHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L +G + + L+ F+ D LEINPL+ TD ++ +DAK++FD NA
Sbjct: 173 IAFSLGLKGAQVKQCVALMGTLYKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + + +E DP+E+ ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 VYRHADIAALRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V+A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+EGK I++ S + +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEEGKAIINNSDVDVIAADDLKDGAEKIVKAVKG 397
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K L +PLVVRLEGTNV+EGK I++ S + +I A DL + A + A
Sbjct: 339 AEGVVSAVKEVGLQVPLVVRLEGTNVEEGKAIINNSDVDVIAADDLKDGAEKIVKA 394
>gi|365157125|ref|ZP_09353406.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus smithii
7_3_47FAA]
gi|363625859|gb|EHL76870.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus smithii
7_3_47FAA]
Length = 386
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/389 (42%), Positives = 232/389 (59%), Gaps = 40/389 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L +V+KAQI AGGRG GV N+ ++ E+++G L+T
Sbjct: 31 AVEAAKELGTDVWVVKAQIHAGGRGKA-------GGVKIAKNLDEVRTYAEELLGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y IV DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPKGKEVKRLLIEEGCDIKKEYYVGIVLDRAASRVVLMASEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+T FQ A++IA +
Sbjct: 144 IFKETIDPLTGLTP-----------FQ----------------------ARRIAFHINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +AA + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 NELVNQAANFMLGLYKVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+L+Y+ ++GNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLSYISLEGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIATGIVEAAKELGLQVPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAAS 424
GTNV GK+IL+ES L +I A + + A
Sbjct: 351 GTNVDLGKKILNESGLHIIAAESMADGAQ 379
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV GK+IL+ES L +I A + + A +
Sbjct: 329 ATGIVEAAKELGLQVPLVVRLEGTNVDLGKKILNESGLHIIAAESMADGAQKIV 382
>gi|85704793|ref|ZP_01035894.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
gi|85670611|gb|EAQ25471.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. 217]
Length = 397
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/405 (42%), Positives = 237/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
E+A+TA + L + +V+KAQI AGGRG G F G GV +V++ ++
Sbjct: 29 EEAKTAASAL---DGPLWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLARSVEEAAEEAKR 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+TKQT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTKQTGAAGKQVNRIYIEDGSGIQTEMYLALLVDRQTSRVSFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA KTP + + +D G + F G A +NL L+
Sbjct: 146 VAEKTPEKILSFSVDPATG-----------YQPFHGRRIA---------FNLGLTG---- 181
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
G +K A + L+ LF+ D LEINPL+ +D+ ++ +DAK+ FD NA
Sbjct: 182 --------GQIKQCVAL-MGTLYKLFVEKDMEMLEINPLIVSDKGDLKCLDAKMGFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHADIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I++ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKA 394
>gi|307942802|ref|ZP_07658147.1| succinyl-CoA ligase [ADP-forming] subunit beta [Roseibium sp.
TrichSKD4]
gi|307773598|gb|EFO32814.1| succinyl-CoA ligase [ADP-forming] subunit beta [Roseibium sp.
TrichSKD4]
Length = 399
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 233/393 (59%), Gaps = 36/393 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
+ V + A A K L +V+K+QI AGGRG G F K GV +++++
Sbjct: 20 AEGVAIFSADEAEAAAKQLPGPLWVVKSQIHAGGRGKGKFKELAADAKGGVRLAFSLEEV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
++M+G+ L+TKQT +G VN++ + +I RE Y I+ DR P ++S G
Sbjct: 80 TSHAKEMLGNALVTKQTGDSGKVVNRLYIEDGADIERELYLSILVDRTVGRPAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA +TP + +PID G+TE+ A+ + D+L+ G + T LF
Sbjct: 140 GMDIEAVAEETPEKIHNLPIDPDTGVTEANAKQLCDWLKLDGQAREDGMT-------LF- 191
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L F+ D LE+NPL+ + + +DAK+
Sbjct: 192 -------------------------PILHKAFVEKDMALLEVNPLIVMKDGRLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR +I + + +E D +E++ASKY+L YV +DG+IGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHDDIMALRDETEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANFLDVGGG ++E + AF+II+SD NVK ILVN+FGGI+ C IA+G+V A
Sbjct: 287 KLYGSEPANFLDVGGGASKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 414
K L +PLVVRLEGTNV+ GK+I++ES L +I
Sbjct: 347 KEVGLQVPLVVRLEGTNVELGKKIINESGLNVI 379
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGTNV+ GK+I++ES L +I
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVELGKKIINESGLNVI 379
>gi|407798233|ref|ZP_11145141.1| succinyl-CoA synthetase subunit beta [Oceaniovalibus guishaninsula
JLT2003]
gi|407059669|gb|EKE45597.1| succinyl-CoA synthetase subunit beta [Oceaniovalibus guishaninsula
JLT2003]
Length = 397
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 235/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A+TA +L+ +V+KAQI AGGRG GHF D+G K GV +V++ +
Sbjct: 29 EEAKTAAG---ELDGPLWVVKAQIHAGGRGKGHFKEADSGEKGGVRLAKSVEEAAEEARR 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT TG VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPTGKQVNRIYIEDGSGIETEMYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + F G ++
Sbjct: 146 VAASTPDRILSFSVDPATG-----------YQPFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A L +G + + L+ F+ D LEINPL+ TD ++ +DAK++FD NA
Sbjct: 173 VAFALGLKGGQVKQCVGLLANLYRAFVEKDMEMLEINPLIVTDSGDLKVLDAKVSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + + +E D +E+ ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHADIAALRDETEEDAKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGSE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I+ S L +I A DL D A +V A +
Sbjct: 353 VPLVVRLEGTNVEKGKEIIRNSDLDVIAADDLKDGAEKIVKAVRG 397
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEKGKEIIRNSDLDVIAADDLKDGAEKIVKA 394
>gi|334343784|ref|YP_004552336.1| succinyl-CoA ligase subunit beta [Sphingobium chlorophenolicum L-1]
gi|334100406|gb|AEG47830.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Sphingobium
chlorophenolicum L-1]
Length = 399
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/379 (43%), Positives = 222/379 (58%), Gaps = 36/379 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV N+ ++ M+G+ L+T QT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAFNLDEVKAHATDMLGNTLVTIQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y ++ DR + ++S GG DIE VA TP + + +D
Sbjct: 103 VNRLYITDGADIAKEFYLALLVDRASSRVAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A L GD +AK A +V
Sbjct: 163 SGFQPHHGRAVAAALGLSGD-QAKQAAKV------------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ FL DA Q+E+NPL T++ ++ +DAK+ FD NA FR K+I +++E D
Sbjct: 191 -ASSLYAAFLDTDAEQIEVNPLALTEQGNLLVLDAKVGFDGNAMFRHKDIAELRDLTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P EV+AS+Y+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D VK ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAA 423
IL S L ++ A DL +AA
Sbjct: 370 ILAASGLAIVPADDLGDAA 388
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S L ++ A DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVQQGKDILAASGLAIVPADDLGDAARKIV 392
>gi|110678921|ref|YP_681928.1| succinyl-CoA synthetase subunit beta [Roseobacter denitrificans OCh
114]
gi|109455037|gb|ABG31242.1| succinyl-CoA synthase, beta subunit [Roseobacter denitrificans OCh
114]
Length = 397
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/405 (42%), Positives = 232/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +L+ +V+KAQI AGGRG G F D G K GV T +V + +K
Sbjct: 29 EDAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVAEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYLALLVDRQTSRVSFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + F G ++
Sbjct: 146 VAASTPEKILSFSVDPASG-----------YQAFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L G + + L+ F+ D LEINPL+ T+ ++ +DAK+ FD NA
Sbjct: 173 IAFALGLEGKQVKQCVGLMGLLYTAFMEKDMEMLEINPLIVTNTGDLKVLDAKVAFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E D +E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHADISELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNVQ+GK I++ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVQQGKDIINNSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNVQ+GK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVQQGKDIINNSGLDVIAADDLKDGAQKIVKA 394
>gi|372278180|ref|ZP_09514216.1| succinyl-CoA synthetase subunit beta [Oceanicola sp. S124]
Length = 397
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/418 (41%), Positives = 239/418 (57%), Gaps = 42/418 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHF 74
PVS + K ++A+TA +L+ +V+KAQI AGGRG G F G K GV
Sbjct: 18 PVSDGRAVLKA--DEAKTAAG---ELDGPLWVVKAQIHAGGRGKGKFVEESAGEKGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
+V++ +KM+G L+T QT G VN++ + +I RE Y ++ DR +
Sbjct: 73 AKSVEEAEQEAKKMLGKTLVTHQTGPAGKQVNRIYIEAGSDIERELYLALLVDRQTSSIS 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
V+ S GG DIE VAA TP + + ID G + F G
Sbjct: 133 VVCSTEGGMDIEEVAAATPEKILSFSIDPATG-----------YAPFHG----------- 170
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
+K+A L +G + + L+ F D QLEINPL+ + +
Sbjct: 171 -----------RKVAFALGLKGAAMKQCVKLIGDLYRAFTEKDMEQLEINPLIVMPDGNL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+DAK+ FD NA +R +I + + +E DP+E+ ASKY+LNY+ +DG IGC+VNGAGLA
Sbjct: 220 KVLDAKVGFDGNAVYRHADIAALRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA
Sbjct: 280 MATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDIIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+G++ A K L +PLVVRLEGTNV++GK I+ S L +I A +L D A +V A K
Sbjct: 340 EGVIAAVKEVGLQVPLVVRLEGTNVEKGKEIIATSGLNVIAADNLSDGAEKIVKAVKG 397
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I A +L + A + A
Sbjct: 339 AEGVIAAVKEVGLQVPLVVRLEGTNVEKGKEIIATSGLNVIAADNLSDGAEKIVKA 394
>gi|254488451|ref|ZP_05101656.1| succinyl-CoA synthase, beta subunit [Roseobacter sp. GAI101]
gi|214045320|gb|EEB85958.1| succinyl-CoA synthase, beta subunit [Roseobacter sp. GAI101]
Length = 397
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 237/421 (56%), Gaps = 38/421 (9%)
Query: 15 LVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSG 71
L++ S +V L+ A A N +++ +V+KAQI AGGRG G F D G K G
Sbjct: 11 LLRSYGAPVSDGRVVLK-AEDAKNAAGEMDGPLWVVKAQIHAGGRGKGSFKEADAGEKGG 69
Query: 72 VHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHN 131
V T +V++ +KM+G L+T QT G VN++ + I E Y ++ DR
Sbjct: 70 VRLTKSVEEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYLALLVDRQTA 129
Query: 132 GPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAAT 191
+ S GG DIE VA TP + + +D G F F G
Sbjct: 130 RVGFVCSTEGGMDIEEVAESTPEKIISFSVDPATG-----------FQPFHG-------- 170
Query: 192 EVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDE 251
+++A L G + T + +L+ F D LEINPL+ TD
Sbjct: 171 --------------RRVAFALGLEGKQVKQCVTLMGQLYKAFTDKDMEMLEINPLIVTDS 216
Query: 252 REVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGA 311
++ +DAK++FD NA +R +I + +E D +E++ASKY+LNY+ +DG IGC+VNGA
Sbjct: 217 GDLKVLDAKVSFDGNAMYRHADIAELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGA 276
Query: 312 GLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCA 371
GLAMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C
Sbjct: 277 GLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCD 336
Query: 372 TIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
IA+G++ A K L +PLVVRLEGTNV++GK I+ S L +I A DL D A +V A K
Sbjct: 337 VIAEGVIAAVKEVGLKVPLVVRLEGTNVEQGKEIIKNSGLDVIAADDLKDGAQKIVKAVK 396
Query: 431 S 431
Sbjct: 397 G 397
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEQGKEIIKNSGLDVIAADDLKDGAQKIVKA 394
>gi|378827746|ref|YP_005190478.1| succinyl-CoA synthetase beta chain [Sinorhizobium fredii HH103]
gi|365180798|emb|CCE97653.1| succinyl-CoA synthetase beta chain [Sinorhizobium fredii HH103]
Length = 398
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 231/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V ++ +M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANATEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPG 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T + + L+ G+ +A A +KL+ +
Sbjct: 163 NGVTADDLKTLTAALQLDGEARADA----EKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFVEKDMSLLEVNPLIVMKNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 HAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|384214147|ref|YP_005605310.1| succinyl-CoA synthetase beta chain [Bradyrhizobium japonicum USDA
6]
gi|354953043|dbj|BAL05722.1| succinyl-CoA synthetase beta chain [Bradyrhizobium japonicum USDA
6]
Length = 398
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 235/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV + ++ ++M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVAEFAKQMLGATLVTVQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y I+ DR + ++S GG +IE+VA TP + T +D
Sbjct: 103 VNRLYIEDGSDIDKEFYLSILVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A+ L+ GDL A + +KL
Sbjct: 163 TGIMGHHGRTVANALKLSGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L+ F++ D + LEINPLV T + ++ +DAK++FDDNA FR + + + +E D
Sbjct: 191 -TAQLYTAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVLALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMSPANFLDVGGSASKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+ A + LS+PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A +LD+AA +V A K
Sbjct: 370 IIRESGLNVVPADNLDDAAQKIVKAVKG 397
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A + A + LS+PLVVRLEGTNV+ GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVTAAVREVGLSVPLVVRLEGTNVELGKKIIRESGLNVVPADNLDDAAQKIVKA 394
>gi|163744276|ref|ZP_02151636.1| succinyl-CoA synthase, beta subunit [Oceanibulbus indolifex HEL-45]
gi|161381094|gb|EDQ05503.1| succinyl-CoA synthase, beta subunit [Oceanibulbus indolifex HEL-45]
Length = 397
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 236/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
EDA+TA +++ +V+KAQI AGGRG G F G K GV T +V++ +K
Sbjct: 29 EDAKTAAG---EMDGPLWVVKAQIHAGGRGKGSFKEAGAGEKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I RE Y ++ DR + + S GG DIE
Sbjct: 86 MLGKTLVTHQTGPAGKQVNRIYIEDGSDIERELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + + +D G + F G ++
Sbjct: 146 VADATPEKILSFSVDPATG-----------YQPFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A L G + + +L+ F+ D LEINPL+ ++ +DAK++FD NA
Sbjct: 173 VAFSLGLEGTAVKQCVKLMGQLYQAFIEKDMEMLEINPLIVMPGNDLKVLDAKVSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+RQ ++ + + +E D +E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 MYRQPDVANLRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDENVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+EGK I++ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+EGK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEEGKAIINNSGLDVIAADDLKDGAQKIVKA 394
>gi|339320151|ref|YP_004679846.1| succinyl-CoA synthetase subunit beta [Candidatus Midichloria
mitochondrii IricVA]
gi|338226276|gb|AEI89160.1| succinyl-CoA synthetase, beta subunit [Candidatus Midichloria
mitochondrii IricVA]
Length = 388
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/390 (42%), Positives = 235/390 (60%), Gaps = 44/390 (11%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A ++ K L+ K +V+KAQI AGGRG GV ++ + P E M+G +L+T
Sbjct: 31 AESVAKKLDTKVWVVKAQIHAGGRGKA-------GGVKVLRDIALVKPTAESMLGMRLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
+QT G V +V + +I +E YF I+ DR + V+I S GG DIE VAAK+P
Sbjct: 84 QQTGPEGKIVKRVYIEAGSDIKKEYYFSIIVDRNTSSVVLISSTEGGMDIEEVAAKSPGK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQ--KIADFLE 213
+ + ID G+ DF + K+ + F + AQ + A F
Sbjct: 144 IIRVVIDTVMGLQ--------DF-------------HIGKIISAFKFTPAQGKRFAPF-- 180
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
V+ L+ F+ DA+Q+E+NPL+ET++ E +++DAK NFD NA +R +
Sbjct: 181 ------------VKSLYKAFIETDASQIEVNPLIETNDGEFVALDAKFNFDPNALYRHSD 228
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I ++ E DP EV A+ ++LNYV MDGNIGC+VNGAGLAMATMDII+LHGG+PANFLD
Sbjct: 229 IALLDDPDERDPLEVQAADFDLNYVKMDGNIGCMVNGAGLAMATMDIIQLHGGKPANFLD 288
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGG E + +AF+II++D VK IL+N+FGGI+ C IA G+V A K + +P+VVR
Sbjct: 289 VGGSATTEKVTEAFKIITADQEVKGILINIFGGIMRCDVIASGVVTAAKEVGIKVPVVVR 348
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LEGTN ++G+ I++ S L + ASDL +AA
Sbjct: 349 LEGTNAEKGREIINNSGLAVESASDLIDAA 378
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +V A K + +P+VVRLEGTN ++G+ I++ S L + ASDL +AA + A
Sbjct: 329 ASGVVTAAKEVGIKVPVVVRLEGTNAEKGREIINNSGLAVESASDLIDAAEKIVKA 384
>gi|189347425|ref|YP_001943954.1| succinyl-CoA synthetase subunit beta [Chlorobium limicola DSM 245]
gi|226734933|sp|B3EFL3.1|SUCC_CHLL2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|189341572|gb|ACD90975.1| succinyl-CoA synthetase, beta subunit [Chlorobium limicola DSM 245]
Length = 392
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/397 (42%), Positives = 237/397 (59%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + ++ V+KAQI AGGRG GV + + I +M+G
Sbjct: 30 EAKQAAQQLFEEQGSPVVVVKAQIHAGGRGKA-------GGVKLAKSPDEAMEIARQMLG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V++++V + +NI RE Y I DR + V+++S GG +IE VA
Sbjct: 83 ATLVTHQTGPEGKQVSRLLVEEGMNIDREFYVGITLDRSTSRNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I +D G+ A++ A FL +G+
Sbjct: 143 ETPDKLLKIQVDPLYGLQGFQAREAAFFLGLEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+FR A T + L+N ++++DA+ EINPLV T E V+++DAKINFD NA FR
Sbjct: 177 --QFR-----NAVTFIIALYNAYMTIDASLAEINPLVVTKEGRVLALDAKINFDGNALFR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
KN + +E DP EV+ASK NLNYV +DGN+GC+VNGAGLAMATMD+I+L GG PAN
Sbjct: 230 HKNFLELRDTNEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGRPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + E++ + F+II SD NV+ ILVN+FGGIV C +A G++ A + L++P+
Sbjct: 290 FLDVGGGASPETVEEGFKIILSDKNVRAILVNIFGGIVRCDRVAGGIIQAARKIGLNLPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN + +++LDES L LI A+ L +AA+ VN
Sbjct: 350 IVRLEGTNAEIAQKMLDESGLNLIAANGLHDAAAKVN 386
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + L++P++VRLEGTN + +++LDES L LI A+ L +AA
Sbjct: 333 AGGIIQAARKIGLNLPVIVRLEGTNAEIAQKMLDESGLNLIAANGLHDAA 382
>gi|359409192|ref|ZP_09201660.1| succinyl-CoA synthetase, beta subunit [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675945|gb|EHI48298.1| succinyl-CoA synthetase, beta subunit [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 388
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/381 (42%), Positives = 230/381 (60%), Gaps = 40/381 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV +V ++ E+++G L+T QT G V ++
Sbjct: 44 VVKAQIHAGGRG-------KAGGVKVVKSVAEVKAEAERLLGSTLVTHQTGPAGKEVQRL 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+ + +I RE Y ++ DR + VI S GG DIE VAA+TP + T+ ID G+
Sbjct: 97 YIEQGCDIGRELYLSMLVDRASSQVTVIASTEGGMDIEAVAAETPEKILTVSIDPATGLK 156
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ IA+ L G + A++ + FL
Sbjct: 157 PHHVRSIANALGLTG-------------------ATAKQASGFL--------------SG 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
++ F+ +DA+ +EINPLV T +++++DAK+ FDDNA FRQK++ + ++SE D EV
Sbjct: 184 IYTAFIKLDASLMEINPLVVTGSGDLLALDAKMGFDDNALFRQKDVLALRDLSEEDESEV 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
AS++ LNY+ +DG IGC+VNGAGLAMATMDIIKL GGEPANFLDVGG E + +AF+
Sbjct: 244 KASEFELNYIKLDGTIGCMVNGAGLAMATMDIIKLEGGEPANFLDVGGSATTERVTEAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NV+ ILVN+FGGI+ C IA+G+V A ++ L+ PLVVRLEGTNV++GK+I+ +
Sbjct: 304 IILSDPNVEGILVNIFGGIMRCDVIAEGVVEAARTLGLTKPLVVRLEGTNVEQGKQIMAD 363
Query: 409 SKLPLIFASDLDEAASLVNAC 429
S L +I A +L +AA + A
Sbjct: 364 SGLAIISADNLGDAAQKIVAA 384
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A ++ L+ PLVVRLEGTNV++GK+I+ +S L +I A +L +AA + A
Sbjct: 329 AEGVVEAARTLGLTKPLVVRLEGTNVEQGKQIMADSGLAIISADNLGDAAQKIVAA 384
>gi|149183634|ref|ZP_01862051.1| succinyl-CoA synthetase subunit beta [Bacillus sp. SG-1]
gi|148848651|gb|EDL62884.1| succinyl-CoA synthetase subunit beta [Bacillus sp. SG-1]
Length = 386
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 237/391 (60%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV +V ++ E+++G
Sbjct: 28 ADEAVEAAKTLDSSVYVVKAQIHAGGRGKA-------GGVKIAKSVDEVRTYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAA+T
Sbjct: 81 LVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAAET 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+T FQ A++IA +
Sbjct: 141 PEKIFKEYIDPVVGLTG-----------FQ----------------------ARRIAFNI 167
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+L KAA + L+N+++ DA+ +EINPLV T +V+++DAK NFD NA +RQK
Sbjct: 168 NIPKELVNKAAKFMLGLYNVYIQKDASIVEINPLVVTGGGDVMALDAKFNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
N+ ++ E D +E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDI+K +GG+PANFL
Sbjct: 228 NVLELRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDENVKGIFVNIFGGIMKCDIIAEGVVEAAKQVELTVPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL+ES L +I A + + A
Sbjct: 348 RLEGTNVDLGKKILNESGLNIIAAQSMADGA 378
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV GK+IL+ES L +I A + + A +
Sbjct: 329 AEGVVEAAKQVELTVPLVVRLEGTNVDLGKKILNESGLNIIAAQSMADGAQKIV 382
>gi|85713704|ref|ZP_01044694.1| succinyl-CoA synthetase subunit beta [Nitrobacter sp. Nb-311A]
gi|85699608|gb|EAQ37475.1| succinyl-CoA synthetase subunit beta [Nitrobacter sp. Nb-311A]
Length = 399
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 230/388 (59%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV ++ ++ +M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGTFKESAAGDKGGVRLARSIDEVKQFAGQMLGATLVTAQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I +E Y + DR + ++S GG +IE VA KTP + T +D
Sbjct: 103 VNRLYIEEGSDIDKEFYLSALVDRETSRISFVVSTEGGMNIEEVAHKTPEKIVTFSVDPV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + G AKA L RGDL +A
Sbjct: 163 TGV-----------MGHHGRTAAKA----------------------LGLRGDLGKQAEK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V +L+N F++ D LEINPLV T + E+ +DAKI+FD NA +R + + + SE D
Sbjct: 190 LVAQLYNAFIAKDMAMLEINPLVVTKQGELRVLDAKISFDSNALYRHSEVVALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E+ AS+Y+L+YV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++ +
Sbjct: 250 AKEIKASRYDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMSPANFLDVGGGATKDKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK IL+N+FGGI+ C IA G+V A K L++PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILINIFGGIMKCDVIADGVVAAVKQVGLNVPLVVRLEGTNVDAGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A DLD+AA +V A K
Sbjct: 370 IIRESGLNVLPADDLDDAAQKIVKAVKG 397
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L++PLVVRLEGTNV GK+I+ ES L ++ A DLD+AA + A
Sbjct: 339 ADGVVAAVKQVGLNVPLVVRLEGTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKA 394
>gi|149202191|ref|ZP_01879164.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
gi|149144289|gb|EDM32320.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
Length = 397
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 241/423 (56%), Gaps = 42/423 (9%)
Query: 15 LVKPVSTVHSTDKVCL--EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFK 69
L++ S +V L E+A+TA L + +V+KAQI AGGRG G F G K
Sbjct: 11 LLRSYGAPVSEGRVVLRGEEAKTAAGAL---DGPVWVVKAQIHAGGRGKGKFKEAGAGEK 67
Query: 70 SGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRL 129
GV +V + ++M+G L+T QT G VN++ + I RE Y ++ DR
Sbjct: 68 GGVRIAKSVNEAAEEAKRMLGRTLVTHQTGPEGKQVNRIYIENGSAIARELYLALLIDRQ 127
Query: 130 HNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKA 189
+ + S GG DIE VAA+TP + + +D G ++ + G
Sbjct: 128 TSRISFVCSTEGGMDIEEVAAETPEKILSFAVDPATG-----------YMPYHG------ 170
Query: 190 ATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET 249
++IA L G + + + L+ F+ D LEINPL+ T
Sbjct: 171 ----------------RRIAFALGLTGGQIKQCVSLMGLLYRAFVEKDMEMLEINPLIVT 214
Query: 250 DEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVN 309
+ ++ +DAK+ FD NA +R +I + SE DP+E++ASKY+LNY+ +DG IGC+VN
Sbjct: 215 TDGNLMVLDAKLGFDGNAIYRHADIAELRDTSEEDPKELEASKYDLNYIALDGEIGCMVN 274
Query: 310 GAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVN 369
GAGLAMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+
Sbjct: 275 GAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMR 334
Query: 370 CATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNA 428
C IA+G+V A K L +PLVVRLEGTNV++GK I++ S L +I A DL D A +V A
Sbjct: 335 CDVIAEGVVAAVKEVGLKVPLVVRLEGTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKA 394
Query: 429 CKS 431
K
Sbjct: 395 VKG 397
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKA 394
>gi|440228186|ref|YP_007335277.1| succinyl-CoA synthetase beta chain [Rhizobium tropici CIAT 899]
gi|440039697|gb|AGB72731.1| succinyl-CoA synthetase beta chain [Rhizobium tropici CIAT 899]
Length = 397
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 170/411 (41%), Positives = 237/411 (57%), Gaps = 37/411 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
D V + A A K L YV+K+QI AGGRG G F K GV ++ D+
Sbjct: 20 ADGVAIFSADEAAAAAKQLPGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSIDDV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ M+G+ L+TKQT G VN++ + +I RE Y I+ DR ++S G
Sbjct: 80 VANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA TP + T+ ID G+T + ++D L+ +G + AA KL+ +
Sbjct: 140 GMDIETVAHDTPEKIITVAIDPSTGVTAANTAALSDALKLEGAAREDAA----KLFPI-- 193
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L+ F+ D LE+NPL+ + +DAK+
Sbjct: 194 ---------------------------LYKAFVEKDMALLEVNPLIVMTNGRLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR +++ + + SE D +E+ A +Y+L YV +DGNIGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHEDVRALRDTSEEDEKEIQAHEYDLAYVALDGNIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANFLDVGGG +E + AF+II++D V+ ILVN+FGGI+ C IA+G++ A
Sbjct: 287 KLYGAEPANFLDVGGGATKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVLAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA +V A K
Sbjct: 347 KEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKAVKG 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKA 394
>gi|365890802|ref|ZP_09429292.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. STM 3809]
gi|365333308|emb|CCE01823.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. STM 3809]
Length = 398
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 239/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
EDA A K L +V+K+QI AGGRG G F G K GV ++ ++ ++
Sbjct: 29 EDADAAA---KTLGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNAFAKQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I +E Y ++ DR + ++S GG +IE+
Sbjct: 86 MLGATLVTVQTGPEGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + T +D GI + +A L+ GDL A + +KL
Sbjct: 146 VAHSTPEKIVTFSVDPATGIMGHHGRAVAKALKLSGDL----AKQAEKLTT--------- 192
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F++ D LEINPLV T + ++ +DAK++FD NA
Sbjct: 193 --------------------QLYTAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
F+ + + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LFKHPEVVALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGME 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKA 394
>gi|296447231|ref|ZP_06889161.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
OB3b]
gi|296255290|gb|EFH02387.1| succinyl-CoA synthetase, beta subunit [Methylosinus trichosporium
OB3b]
Length = 399
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/401 (41%), Positives = 233/401 (58%), Gaps = 36/401 (8%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKM 88
+A+ A + L +V+KAQI AGGRG G F G K GV ++ ++ ++M
Sbjct: 27 EAQEARQAAQSLPGPVFVVKAQIHAGGRGKGKFKETAAGDKGGVRLARSLDEVETFAKEM 86
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+G L+T QT TG VN++ + +I +E Y ++ DR + ++S GGTDIE V
Sbjct: 87 LGSTLVTVQTGATGKQVNRLYIEDGADIAQEFYLSLLIDRATSRVSFVVSTEGGTDIEAV 146
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A TP + T +D G+ + +AD L +G L +A +KL++ FL+
Sbjct: 147 AHATPEKIVTFSVDPATGVMPHHGRKVADALGLKGPLVKEAVDLTEKLFSAFLAK----- 201
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
D LEINPL+ T + + +DAKI+FDDNA
Sbjct: 202 ----------------------------DMELLEINPLIVTKDGRLRCLDAKISFDDNAL 233
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+R ++ + + +E D +E++ASKY L Y+ +DG IGC+VNGAGLAMATMDIIKL+G P
Sbjct: 234 YRHPDVVALRDKTEEDEKEIEASKYELAYIALDGTIGCMVNGAGLAMATMDIIKLYGENP 293
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG +E + AF+II++D VK ILVN+FGGI+ C IA+G++ A K L++
Sbjct: 294 ANFLDVGGGAGKEKVTAAFKIITADPKVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLAV 353
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
PLVVRLEGTNV+ GK IL S L +I A DLD+AA + A
Sbjct: 354 PLVVRLEGTNVELGKSILAASGLDVIPADDLDDAAQKIVAA 394
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L++PLVVRLEGTNV+ GK IL S L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLAVPLVVRLEGTNVELGKSILAASGLDVIPADDLDDAAQKIVAA 394
>gi|337265551|ref|YP_004609606.1| succinyl-CoA synthetase subunit beta [Mesorhizobium opportunistum
WSM2075]
gi|336025861|gb|AEH85512.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium opportunistum
WSM2075]
Length = 397
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 229/388 (59%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V D+ +M+GH L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVADVVANANEMLGHTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIERELYLSILVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIITVAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + DLKA + L+ GD T
Sbjct: 163 KGVTAA-------------DLKA--------------------LNTALKLDGDAANDGNT 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD+NA FR ++ + +E D
Sbjct: 190 LFPILYKAFVEKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVMELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+ D VK IL+N+FGGI+ C IA+G++ A K L +PLVVRLEGTN + GK+
Sbjct: 310 AAFKIITKDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLKVPLVVRLEGTNAELGKK 369
Query: 405 ILDESKLPLIFASDLDEAA-SLVNACKS 431
I+++S L ++ A DLD+AA +V+A K
Sbjct: 370 IINDSGLNVVSADDLDDAAKKIVSAVKG 397
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTN + GK+I+++S L ++ A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNAELGKKIINDSGLNVVSADDLDDAAKKIVSA 394
>gi|149913128|ref|ZP_01901662.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
gi|149813534|gb|EDM73360.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. AzwK-3b]
Length = 397
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 242/423 (57%), Gaps = 42/423 (9%)
Query: 15 LVKPVSTVHSTDKVCL--EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFK 69
L++ S +V L E+A+TA +++ +V+KAQI AGGRG G F G
Sbjct: 11 LLRSYGAPVSDGRVVLRAEEAKTAAG---EMDGPLWVVKAQIHAGGRGKGTFKEPGAGEA 67
Query: 70 SGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRL 129
GV +V++ ++M+G L+TKQT G VN++ + +I +E Y ++ DR+
Sbjct: 68 GGVRLARSVEEAAEEAKRMLGRTLVTKQTGPAGKQVNRIYIEDGSDIEKEFYLALLVDRV 127
Query: 130 HNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKA 189
+ S GG DIE VA KTP + + +D G + F G
Sbjct: 128 TSRISFAASTEGGMDIEEVAEKTPEKILSFSVDPATG-----------YQPFHG------ 170
Query: 190 ATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET 249
++IA L G + + L+ LFL D LEINPL+ T
Sbjct: 171 ----------------RRIAFMLGLEGAQVKQCVKLMGILYQLFLDKDMEMLEINPLIIT 214
Query: 250 DEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVN 309
D+ ++ +DAK+ FD NA +R +I + +E DP+E++ASKY+LNY+ +DG IGC+VN
Sbjct: 215 DKGDLKCLDAKMGFDSNAVYRHADIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVN 274
Query: 310 GAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVN 369
GAGLAMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+
Sbjct: 275 GAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMR 334
Query: 370 CATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNA 428
C IA+G++ A K L +PLVVRLEGTNV++GK I+ S L +I A +L D A +V A
Sbjct: 335 CDVIAEGVIAAVKEVGLKVPLVVRLEGTNVEKGKEIISNSGLDVIAADNLKDGAEKIVKA 394
Query: 429 CKS 431
K
Sbjct: 395 VKG 397
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I A +L + A + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEKGKEIISNSGLDVIAADNLKDGAEKIVKA 394
>gi|146276136|ref|YP_001166295.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides ATCC
17025]
gi|189081782|sp|A4WNM6.1|SUCC_RHOS5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|145554377|gb|ABP68990.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
sphaeroides ATCC 17025]
Length = 397
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 247/421 (58%), Gaps = 38/421 (9%)
Query: 15 LVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSG 71
L++ S +V L+ A A + +L +V+KAQI AGGRG G F + G K G
Sbjct: 11 LLRSYGAPVSDGRVVLK-ADEAKSAAGELGGPLWVVKAQIHAGGRGKGKFKEPEAGEKGG 69
Query: 72 VHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHN 131
V +V + + ++M+G L+T QT +G VN++ + + +I RE Y ++ DR +
Sbjct: 70 VRLAKSVGEAAELAKQMLGRTLVTHQTGPSGKQVNRIYIEEGSDIARELYLALLVDRGTS 129
Query: 132 GPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAAT 191
++S GG DIE VAA TP + + +D G+++ + +A L +G
Sbjct: 130 RISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEG-------A 182
Query: 192 EVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDE 251
+V++ L V+ L+ F+ D LEINPL+ +
Sbjct: 183 QVKQCVQL--------------------------VKNLYRAFVEKDMEMLEINPLIVMTD 216
Query: 252 REVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGA 311
+ +DAK+ FD+NA +RQ +I + + +E DP+E+ ASK++LNY+ +DG IGC+VNGA
Sbjct: 217 GNLKVLDAKVGFDNNALYRQPDIMALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGA 276
Query: 312 GLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCA 371
GLAMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C
Sbjct: 277 GLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCD 336
Query: 372 TIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACK 430
IA+G++ A K L +PLVVRLEGTNV++GK I+ S L +I +L +AA +V A K
Sbjct: 337 IIAEGIIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAGDNLSDAAQKIVKAVK 396
Query: 431 S 431
Sbjct: 397 G 397
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I +L +AA + A
Sbjct: 339 AEGIIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAGDNLSDAAQKIVKA 394
>gi|381200277|ref|ZP_09907417.1| succinyl-CoA synthetase subunit beta [Sphingobium yanoikuyae
XLDN2-5]
gi|427408037|ref|ZP_18898239.1| succinyl-CoA ligase [ADP-forming] subunit beta [Sphingobium
yanoikuyae ATCC 51230]
gi|425713376|gb|EKU76389.1| succinyl-CoA ligase [ADP-forming] subunit beta [Sphingobium
yanoikuyae ATCC 51230]
Length = 399
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/409 (42%), Positives = 232/409 (56%), Gaps = 41/409 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHF 74
P++ H+ +E+A A K L YV+K+QI AGGRG G F K GV
Sbjct: 18 PIAAGHAA--FTVEEAVEAA---KKLPGPLYVVKSQIHAGGRGKGKFKELAPEAKGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
N+ ++ M+G+ L+T QT + G VN++ + +I +E Y ++ DR +
Sbjct: 73 AFNLDEVKAHATDMLGNTLVTIQTGEAGKQVNRLYITDGADIAKEFYLALLVDRATSRIA 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
++S GG DIE VA TP + + +D G + +A L GDL AK A++V
Sbjct: 133 FVVSTEGGMDIEEVAHSTPEKIHSFSVDPATGFQPHHGRAVAAALGLTGDL-AKQASKV- 190
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
L+ FL DA Q+E+NPL T++ +
Sbjct: 191 -------------------------------AASLYAAFLDTDAEQIEVNPLALTEQGNL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+ +DAK+ FD NA FR K+I +++E D EV+ASKY+L Y+ +DGNIGC+VNGAGLA
Sbjct: 220 LVLDAKVGFDGNAMFRHKDIAELRDLTEEDAAEVEASKYDLAYIKLDGNIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL+G PANFLDVGGG E + AF+II D VK ILVN+FGGI+ C IA
Sbjct: 280 MATMDIIKLNGEFPANFLDVGGGATTEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
G+V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A DL +AA
Sbjct: 340 NGIVEAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVPADDLGDAA 388
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A DL +AA +
Sbjct: 339 ANGIVEAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVPADDLGDAAKKIV 392
>gi|295691153|ref|YP_003594846.1| succinyl-CoA synthetase subunit beta [Caulobacter segnis ATCC
21756]
gi|295433056|gb|ADG12228.1| succinyl-CoA synthetase, beta subunit [Caulobacter segnis ATCC
21756]
Length = 399
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 233/390 (59%), Gaps = 37/390 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F+ K GV +V+++ +M+G L+T QT G
Sbjct: 43 FVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVKTNAAEMLGRVLVTHQTGPKGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + I +E Y ++ DR + V+ S GG DIE+VA TP + T ID
Sbjct: 103 VNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ W +LA+ L G L +AA+
Sbjct: 163 TGV-----------------------------WPTHQRALAKA----LGLTGGLAKEAAS 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ +L+ F++ D LEINPL+ T + + +DAK++FD N+ FR +I + + SE D
Sbjct: 190 LLTQLYTAFMAKDMAMLEINPLIVTADDHLRVLDAKLSFDGNSLFRHPDIKALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDL-DEAASLVNACKSFK 433
I+ ES L +I A+DL D A +V A K +
Sbjct: 370 IISESGLNVIAANDLSDGAEKIVAAVKGAR 399
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I+ ES L +I A+DL + A + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIISESGLNVIAANDLSDGAEKIVAA 394
>gi|294011145|ref|YP_003544605.1| succinyl-CoA synthetase subunit beta [Sphingobium japonicum UT26S]
gi|390167193|ref|ZP_10219191.1| succinyl-CoA synthetase subunit beta [Sphingobium indicum B90A]
gi|292674475|dbj|BAI95993.1| succinyl-CoA synthetase beta chain [Sphingobium japonicum UT26S]
gi|389590239|gb|EIM68239.1| succinyl-CoA synthetase subunit beta [Sphingobium indicum B90A]
Length = 399
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/379 (44%), Positives = 223/379 (58%), Gaps = 36/379 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV N+ ++ M+G+ L+T QT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAFNLDEVKAHAADMLGNTLVTIQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V +I +E Y ++ DR ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYVTDGADIAKEFYLALLVDRATGRVAFVVSTEGGMDIEEVAHSTPEKIHTFAVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A LE GD +AK A +V SSL
Sbjct: 163 TGFMPHHGRAVAAALELTGD-QAKQAAKVA-------SSL-------------------- 194
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ FL+ DA+Q+EINPL T + ++ +DAK+ FD NA FR K+I +++E D
Sbjct: 195 -----YEAFLATDASQIEINPLAVTQQGNLLVLDAKVGFDGNALFRHKDIVELRDLTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
EV+AS+Y+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++E +
Sbjct: 250 AAEVEASEYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D VK ILVN+FGGI+ C IA G+V A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILKDPAVKGILVNIFGGIMKCDIIADGIVAAAKDVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAA 423
IL S L ++ A DL +AA
Sbjct: 370 ILAASGLAIVPADDLGDAA 388
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S L ++ A DL +AA +
Sbjct: 339 ADGIVAAAKDVNLSVPLVVRLEGTNVQQGKDILAASGLAIVPADDLGDAARKIV 392
>gi|373450618|ref|ZP_09542595.1| succinyl-CoA synthetase, beta subunit [Wolbachia pipientis wAlbB]
gi|371932172|emb|CCE77606.1| succinyl-CoA synthetase, beta subunit [Wolbachia pipientis wAlbB]
Length = 386
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 231/393 (58%), Gaps = 43/393 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ T N LK F V+KAQI AGGRG GV + ++ +++ M+G
Sbjct: 29 EEVETQINQLKSDVF---VVKAQIHAGGRGKA-------GGVKLAKSTKEAQQLVKDMLG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT +G V KV + + +I +E Y +V D + V I S GG DIE VA
Sbjct: 79 ITLVTHQTGSSGQQVKKVYIEEGSSIKKEYYLSLVVDPKLSRLVFIFSSEGGMDIEEVAK 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P + ID G T + + KL+N F S Q
Sbjct: 139 NSPTKIVNFNIDPATGFT---------------------SLDNNKLFNSFNLSSEQI--- 174
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
K + +++ F++ DA+Q+EINPLVET+ + I++DAKINFDDNA +R
Sbjct: 175 ---------GKVTNIAKNIYDAFITTDASQIEINPLVETNAGDFIALDAKINFDDNALYR 225
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
I S + E E++ASK+ L+Y+ MDGNIGC+VNGAGLAMATMDIIK +G EPAN
Sbjct: 226 HSEIVSLRDYDEEVKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPAN 285
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++E++ +AF+II SDSNVK ILVN+FGGI+ C IA G+V A K + +PL
Sbjct: 286 FLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPL 345
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRL GTN +EGK+IL+ES L +I A +LDEAA
Sbjct: 346 VVRLSGTNFEEGKKILEESGLNIIAADELDEAA 378
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN +EGK+IL+ES L +I A +LDEAA +
Sbjct: 329 ASGIVAAAKEMSIKVPLVVRLSGTNFEEGKKILEESGLNIIAADELDEAAQKIV 382
>gi|399076665|ref|ZP_10752118.1| succinyl-CoA synthetase, beta subunit [Caulobacter sp. AP07]
gi|398037009|gb|EJL30213.1| succinyl-CoA synthetase, beta subunit [Caulobacter sp. AP07]
Length = 399
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 234/390 (60%), Gaps = 37/390 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F+ K GV +V D+ E+M+G L+T QT G
Sbjct: 43 FVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVADVKASAEEMLGRVLVTHQTGPKGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + I +E Y ++ DR + V+ S GG DIE+VA TP + + ID
Sbjct: 103 VNRLYIEEGAAIAKEFYLSLLVDRETSMVSVVASTEGGMDIEDVAHDTPEKIHSFSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ W + A+ +A L G L +AAT
Sbjct: 163 TGV-----------------------------W----PTHARALAKALGLTGGLAKEAAT 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ +L+ FL+ D LE+NPL+ T + + +DAK++FD N+ FR +I + +E D
Sbjct: 190 LLNQLYAAFLAKDMAMLEVNPLIVTADDHLRVLDAKVSFDGNSLFRHPDIRELRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKFDLAYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K L++PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPAVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLTVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDL-DEAASLVNACKSFK 433
I+ ES L +I A+DL D A +V A K +
Sbjct: 370 IISESGLNVIAANDLSDGAEKIVAAVKGAR 399
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L++PLVVRLEGTNV+ GK+I+ ES L +I A+DL + A + A
Sbjct: 339 AEGVIAAVKEVGLTVPLVVRLEGTNVELGKKIISESGLNVIAANDLSDGAEKIVAA 394
>gi|126734828|ref|ZP_01750574.1| succinyl-CoA synthetase, beta subunit [Roseobacter sp. CCS2]
gi|126715383|gb|EBA12248.1| succinyl-CoA synthetase, beta subunit [Roseobacter sp. CCS2]
Length = 397
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 234/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +++ +V+KAQI AGGRG G F D G GV +V++ +K
Sbjct: 29 EDAKTAAG---EMDGPLWVVKAQIHAGGRGKGKFKEADAGEAGGVRLAKSVEEAAQEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEDGSGIETEMYLALLVDRATSRIGFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + +D G + F G ++
Sbjct: 146 VAENTPEKILNFTVDPATG-----------YQAFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A L G+ + + L+ F+ D LEINPL+ TD ++ +DAK+ FD NA
Sbjct: 173 VAFALGLTGNQVKQCVALMGNLYKAFVEKDMEMLEINPLIVTDGGDLKVLDAKVAFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R ++ + + +E DP+E+ ASK++LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 VYRHADVAALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V+A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVSAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+EGKRI++ES + +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEEGKRIINESDVDVIAADDLKDGAEKIVKAVKG 397
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K L +PLVVRLEGTNV+EGKRI++ES + +I A DL + A + A
Sbjct: 339 AEGVVSAVKEVGLQVPLVVRLEGTNVEEGKRIINESDVDVIAADDLKDGAEKIVKA 394
>gi|347529584|ref|YP_004836332.1| succinyl-CoA synthetase subunit beta [Sphingobium sp. SYK-6]
gi|345138266|dbj|BAK67875.1| succinyl-CoA synthetase beta chain [Sphingobium sp. SYK-6]
Length = 398
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/396 (42%), Positives = 226/396 (57%), Gaps = 37/396 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHK 92
A K L YV+KAQI AGGRG G F K GV ++++ + M+G+
Sbjct: 31 AVEAAKKLPGPLYVVKAQIHAGGRGKGKFKELGPDAKGGVRLAKTLEEVEAHAKDMLGNT 90
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT + G VN++ + V+I +E Y ++ DR ++ S GG DIE VA T
Sbjct: 91 LVTIQTGEAGKQVNRLYITDGVDIDKEFYLALLVDRASGRIAMVASTEGGMDIEEVAHST 150
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + TI ID G F+ +++A L
Sbjct: 151 PEKIHTITIDPATG---------------------------------FMPHHGRRVAAAL 177
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
E GDL +AA L+ FL DA+Q+EINPL + + +DAK+ FD NA FR
Sbjct: 178 ELSGDLAKQAAKVAGALYKAFLGTDASQIEINPLAIAGGK-IQVLDAKVGFDGNALFRHP 236
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++ + +E DP E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFL
Sbjct: 237 DLMDLRDETEEDPMELEASKYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFL 296
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG ++E + AF+II SD VK ILVN+FGGI+ C IA G+V A K LS+PLVV
Sbjct: 297 DVGGGASKEKVTAAFKIILSDPAVKGILVNIFGGIMRCDIIADGIVAAAKEVNLSVPLVV 356
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
RLEGTNV +GK IL S L ++ A DL +AA + A
Sbjct: 357 RLEGTNVAQGKEILANSGLAIVPADDLGDAARKIVA 392
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV +GK IL S L ++ A DL +AA +
Sbjct: 338 ADGIVAAAKEVNLSVPLVVRLEGTNVAQGKEILANSGLAIVPADDLGDAARKIV 391
>gi|398383292|ref|ZP_10541364.1| succinyl-CoA synthetase, beta subunit [Sphingobium sp. AP49]
gi|397725010|gb|EJK85467.1| succinyl-CoA synthetase, beta subunit [Sphingobium sp. AP49]
Length = 399
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/414 (41%), Positives = 233/414 (56%), Gaps = 41/414 (9%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHF 74
P++ H+ +E+A A K L YV+K+QI AGGRG G F K GV
Sbjct: 18 PIAAGHAA--FTVEEAVEAA---KKLPGPLYVVKSQIHAGGRGKGKFKELAPEAKGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
N+ ++ M+G+ L+T QT G VN++ + +I +E Y ++ DR +
Sbjct: 73 AFNLDEVKAHATDMLGNTLVTIQTGDAGKQVNRLYITDGADIAKEFYLALLVDRATSRIA 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
++S GG DIE VA TP + + +D G + +A L GDL AK A++V
Sbjct: 133 FVVSTEGGMDIEEVAHSTPEKIHSFSVDPATGFQPHHGRAVAAALGLTGDL-AKQASKV- 190
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
L+ FL DA Q+E+NPL T++ +
Sbjct: 191 -------------------------------ASSLYAAFLDTDAEQIEVNPLALTEQGNL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+ +DAK+ FD NA FR K+I +++E D EV+ASKY+L Y+ +DGNIGC+VNGAGLA
Sbjct: 220 LVLDAKVGFDGNAMFRHKDIAELRDLTEEDAAEVEASKYDLAYIKLDGNIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL+G PANFLDVGGG E + AF+II D VK ILVN+FGGI+ C IA
Sbjct: 280 MATMDIIKLNGEFPANFLDVGGGATTEKVTAAFKIILKDPAVKGILVNIFGGIMKCDIIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
G+V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A DL +AA + A
Sbjct: 340 NGIVEAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVPADDLGDAAKKIVA 393
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A DL +AA +
Sbjct: 339 ANGIVEAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVPADDLGDAAKKIV 392
>gi|27375566|ref|NP_767095.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium japonicum USDA
110]
gi|81740313|sp|Q89X60.1|SUCC_BRAJA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|27348703|dbj|BAC45720.1| succinyl-CoA synthetase beta chain [Bradyrhizobium japonicum USDA
110]
Length = 398
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 235/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F G K GV + ++ ++M+G L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVSEFAKQMLGATLVTIQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y ++ DR + ++S GG +IE+VA TP + T +D
Sbjct: 103 VNRLYIEDGSDIDKEFYLSLLVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A+ L+ GDL A + +KL
Sbjct: 163 TGIMGHHGRTVANALKLSGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L+ F++ D + LEINPLV T + ++ +DAK++FDDNA FR + + + +E D
Sbjct: 191 -TAQLYAAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVLALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGSASKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+ A + LS+PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A +LD+AA +V A K
Sbjct: 370 IILESGLNVVPADNLDDAAQKIVKAVKG 397
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A + A + LS+PLVVRLEGTNV+ GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVTAAVREVGLSVPLVVRLEGTNVELGKKIILESGLNVVPADNLDDAAQKIVKA 394
>gi|221060124|ref|XP_002260707.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium
knowlesi strain H]
gi|193810781|emb|CAQ42679.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium
knowlesi strain H]
Length = 461
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 225/378 (59%), Gaps = 34/378 (8%)
Query: 47 EYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+ VIKAQIL+GGRG+G+F +N F+ GVH N ++ I KM+ + L+TKQT + G
Sbjct: 94 DLVIKAQILSGGRGVGYFKENNFEGGVHICRNSTEVKEIASKMLNNTLVTKQTGEEGKKC 153
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N V + + I +E Y + DR +G V++ S GG+ IE ++ K P + + IDV
Sbjct: 154 NTVFICERFYIRKERYVAFLLDRSSDGIVLLGSSMGGSSIEEISKKNPEAIHKMNIDVQN 213
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G + A++ + + F+ + + AT++
Sbjct: 214 GFSTGQAREFCENIGFK-NTELDIATDI-------------------------------- 240
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+ L+ +F D T LEINP ET++ V+ DAK+NFDDNAE+RQK IF Q ++S+ +
Sbjct: 241 IANLYKIFKRYDCTLLEINPFSETNDGRVLCCDAKLNFDDNAEYRQKEIFLQRDLSQENA 300
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E+ A K+NLNYV +DGNI C+VNGAGLAMAT+D+I LH G P+NFLDVGGG E+ I +
Sbjct: 301 EEIQAKKFNLNYVSLDGNIACMVNGAGLAMATLDLIVLHKGSPSNFLDVGGGATEDEITE 360
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
A RII++++ K +N+ GGI+ C IA+G++ A K + PL+VRLEGTN E + +
Sbjct: 361 ALRIINNNAKAKVCFINILGGIMRCDIIARGIIKAFKDTAFTKPLIVRLEGTNQDEAEEL 420
Query: 406 LDESKLPLIFASDLDEAA 423
L +S + IF D++ AA
Sbjct: 421 LRQSGIKCIFCQDMNLAA 438
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K + PL+VRLEGTN E + +L +S + IF D++ AA
Sbjct: 389 ARGIIKAFKDTAFTKPLIVRLEGTNQDEAEELLRQSGIKCIFCQDMNLAA 438
>gi|77464547|ref|YP_354051.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides
2.4.1]
gi|126463387|ref|YP_001044501.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides ATCC
17029]
gi|221640458|ref|YP_002526720.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides
KD131]
gi|332559440|ref|ZP_08413762.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides WS8N]
gi|429207105|ref|ZP_19198364.1| Succinyl-CoA ligase [ADP-forming] beta chain [Rhodobacter sp. AKP1]
gi|123590983|sp|Q3IZ84.1|SUCC_RHOS4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|189081781|sp|A3PN13.1|SUCC_RHOS1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|254778449|sp|B9KNB3.1|SUCC_RHOSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|77388965|gb|ABA80150.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
sphaeroides 2.4.1]
gi|126105051|gb|ABN77729.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
sphaeroides ATCC 17029]
gi|221161239|gb|ACM02219.1| Succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodobacter
sphaeroides KD131]
gi|332277152|gb|EGJ22467.1| succinyl-CoA synthetase subunit beta [Rhodobacter sphaeroides WS8N]
gi|428189480|gb|EKX58033.1| Succinyl-CoA ligase [ADP-forming] beta chain [Rhodobacter sp. AKP1]
Length = 397
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 246/421 (58%), Gaps = 38/421 (9%)
Query: 15 LVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSG 71
L++ S +V L+ A A + +L +V+KAQI AGGRG G F + G K G
Sbjct: 11 LLRSYGAPVSDGRVVLK-ADEAKSAAGELGGPLWVVKAQIHAGGRGKGKFKEPEAGEKGG 69
Query: 72 VHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHN 131
V +V + + ++M+G L+T QT G VN++ + + +I RE Y ++ DR +
Sbjct: 70 VRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYLALLVDRGTS 129
Query: 132 GPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAAT 191
++S GG DIE VAA TP + + +D G+++ + +A L +G
Sbjct: 130 RISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEG-------A 182
Query: 192 EVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDE 251
+V++ L V+ L+ F+ D LEINPL+ +
Sbjct: 183 QVKQCVQL--------------------------VKNLYRAFVEKDMEMLEINPLIVMTD 216
Query: 252 REVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGA 311
+ +DAK+ FD+NA +RQ ++ + + +E DP+E+ ASK++LNY+ +DG IGC+VNGA
Sbjct: 217 GNLKVLDAKVGFDNNALYRQSDVMALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGA 276
Query: 312 GLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCA 371
GLAMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C
Sbjct: 277 GLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCD 336
Query: 372 TIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACK 430
IA+G++ A K L +PLVVRLEGTNV++GK I+ S L +I +L +AA +V A K
Sbjct: 337 IIAEGIIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAGDNLSDAAQKIVKAVK 396
Query: 431 S 431
Sbjct: 397 G 397
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I +L +AA + A
Sbjct: 339 AEGIIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAGDNLSDAAQKIVKA 394
>gi|456351983|dbj|BAM86428.1| succinyl-CoA synthetase beta subunit [Agromonas oligotrophica S58]
Length = 398
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 240/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
ED+ A K L +V+K+QI AGGRG G F G K GV ++ ++ ++
Sbjct: 29 EDSDAAA---KTLGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNAFAKQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I +E Y ++ DR + ++S GG +IE+
Sbjct: 86 MLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + T +D G+ + +A L+ GDL A + +KL
Sbjct: 146 VAHSTPEKIITFSVDPATGVMGHHGRAVAKALKLSGDL----AKQAEKL----------- 190
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+N F++ D LEINPLV T + ++ +DAK++FD NA
Sbjct: 191 ------------------TTQLYNAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
F+ + + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LFKHPEVVALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGME 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKA 394
>gi|149201198|ref|ZP_01878173.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
gi|149145531|gb|EDM33557.1| succinyl-CoA synthetase subunit beta [Roseovarius sp. TM1035]
Length = 397
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 172/405 (42%), Positives = 233/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
E+A+TA L + +V+KAQI AGGRG G F G GV +V+D +
Sbjct: 29 EEAKTAAGAL---DGPIWVVKAQIHAGGRGKGKFKEAGAGEAGGVRLARSVEDAAEEAKC 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+TKQT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTKQTGPAGKQVNRIYIEDGSGIQTEMYLALLVDRQTSRVSFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA KTP + + +D G + IA L G +V++ NL
Sbjct: 146 VAEKTPEKILSFSVDPATGYQPFHGRRIAFNLGLTGG-------QVKQCVNL-------- 190
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+ L+ LFL D LEINPL+ +D+ ++ +DAK+ FD NA
Sbjct: 191 ------------------MGILYKLFLDKDMEMLEINPLIVSDKGDLKCLDAKMGFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHADIAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I++ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVEKGKEIINTSGLDVIAADDLKDGAQKIVKA 394
>gi|404447900|ref|ZP_11012894.1| succinyl-CoA synthetase subunit beta [Indibacter alkaliphilus LW1]
gi|403766486|gb|EJZ27358.1| succinyl-CoA synthetase subunit beta [Indibacter alkaliphilus LW1]
Length = 403
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 170/390 (43%), Positives = 234/390 (60%), Gaps = 39/390 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YVIKAQI AGGRG G +GV ++D+P + ++G L+T QT + G VNK
Sbjct: 47 YVIKAQIHAGGRGKGKVKETGSNGVVLAKKLEDVPEKAKNILGGTLVTIQTGEEGKKVNK 106
Query: 108 VMVAKSVNI-----TRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
++VA+ V +E Y I+ DR V++ S GG DIE VA KTP + +D
Sbjct: 107 ILVAEDVYYPGDSEPKEYYLSILLDRAKGCNVIMASTEGGMDIEEVAEKTPEKIIKEWVD 166
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
G+ A+ +A F+ L+ A E+ K F+S+
Sbjct: 167 PKVGLQGFQARKVA----FKLGLEGNAFKEMVK----FISA------------------- 199
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
L+N ++ DA+Q EINP+++T + ++++VDAK+N DDNA +R K++ +++E
Sbjct: 200 ------LYNAYIGSDASQFEINPVLKTSDDKILAVDAKVNLDDNALYRHKDLAELRDLAE 253
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP EV+A K +LNYV +DGN+GC+VNGAGLAMATMD+IKL GGEPANFLDVGGG N +
Sbjct: 254 EDPLEVEAGKSDLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGGEPANFLDVGGGANATT 313
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQE 401
+ FRII D NVK IL+NVFGGIV C IA G+V A KS + +P++VRL+GTN +E
Sbjct: 314 VEAGFRIILQDPNVKAILINVFGGIVRCDRIANGVVEAYKSIGDIPVPIIVRLQGTNAEE 373
Query: 402 GKRILDESKLPLIFASDLDEAASLVNACKS 431
G +I+DES L + A L EAA V A S
Sbjct: 374 GAKIIDESGLKVSSAITLKEAAEKVRAAIS 403
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A KS + +P++VRL+GTN +EG +I+DES L + A L EAA
Sbjct: 345 ANGVVEAYKSIGDIPVPIIVRLQGTNAEEGAKIIDESGLKVSSAITLKEAA 395
>gi|359790010|ref|ZP_09292932.1| succinyl-CoA synthetase subunit beta [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359254087|gb|EHK57134.1| succinyl-CoA synthetase subunit beta [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 399
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 167/379 (44%), Positives = 223/379 (58%), Gaps = 36/379 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV + DI +M+G+ L+T QT G
Sbjct: 43 YVVKAQIHAGGRGKGRFKELSTDAKGGVRLAKSFVDIRADAAEMLGNTLVTLQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V + I +E Y ++ DR+ + ++S GG DIE VA TP + T ID
Sbjct: 103 VNRIYVEEGSEIEKEFYLSLLIDRVTSRVSFVVSTEGGMDIEQVAHDTPEKIVTFSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A L GDL A + Q L
Sbjct: 163 TGIMPHHGRAVAKALRLDGDL----AKQAQAL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V+ L+ F + D LEINPL+ + + ++ +DAK+ FD NA R +I + + +E D
Sbjct: 191 -VESLYTAFTANDMEMLEINPLIVSKDGKLRCLDAKVGFDSNALARHPDIAALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L+YV +DGNIGC+VNGAGLAMATMDIIK +G EPANFLDVGGG E +
Sbjct: 250 AKEIEASKYDLSYVTLDGNIGCMVNGAGLAMATMDIIKFYGAEPANFLDVGGGATAEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVTAVKEVGLKVPLVVRLEGTNVELGKQ 369
Query: 405 ILDESKLPLIFASDLDEAA 423
IL +S L +I A DLD+AA
Sbjct: 370 ILKQSGLNVIPADDLDDAA 388
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV+ GK+IL +S L +I A DLD+AA +
Sbjct: 339 AEGVVTAVKEVGLKVPLVVRLEGTNVELGKQILKQSGLNVIPADDLDDAAQKIV 392
>gi|349701349|ref|ZP_08902978.1| succinyl-CoA synthetase subunit beta [Gluconacetobacter europaeus
LMG 18494]
Length = 399
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 231/392 (58%), Gaps = 36/392 (9%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
LN V+KAQI AGGRG GHF + GV + ++ + M+G L+TKQT
Sbjct: 38 LNAPVTVVKAQIHAGGRGAGHFAGKPEGRGGVRLARSTAEVSDAADAMLGEVLVTKQTGP 97
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V + V +I RE YF ++ DR V++ SP GG +IE VAA+TP +
Sbjct: 98 MGRLVRTLYVESGCDIARELYFSMLVDRGTGQIVIVASPDGGMEIEEVAARTPERILKEY 157
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D +G+ + ++D+A L G E++ N+
Sbjct: 158 VDPAKGLCDYQSRDLAVRLGLTG-------REIRAFQNV--------------------- 189
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
V+ +N F +DA +EINPLV T +++++DAK++FD+NA FR + +V
Sbjct: 190 -----VRSAYNAFTGLDAAIVEINPLVVTGAGDLLALDAKMSFDENALFRHPELAKLRDV 244
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
E DPRE +A++Y L YVG+DGNIGC+VNGAGLAMATMDIIK+ G EPANFLDVGGG ++
Sbjct: 245 HEEDPREREAAEYGLAYVGLDGNIGCMVNGAGLAMATMDIIKMEGEEPANFLDVGGGASK 304
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + AFRI+ D V+ ILVN+FGGI+ C IA+ ++ A L++PLVVRL GTNV+
Sbjct: 305 ERVAAAFRILIGDPKVRGILVNIFGGIMRCDVIAEAIIAASHETGLTVPLVVRLAGTNVE 364
Query: 401 EGKRILDESKLPLIFASDLDEAA-SLVNACKS 431
GK +L ES L +I A DL +AA +V+A ++
Sbjct: 365 RGKALLAESGLTIIPADDLGDAARKIVSAVRN 396
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +++ A L++PLVVRL GTNV+ GK +L ES L +I A DL +AA + A
Sbjct: 338 AEAIIAASHETGLTVPLVVRLAGTNVERGKALLAESGLTIIPADDLGDAARKIVSA 393
>gi|126740514|ref|ZP_01756201.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
gi|126718315|gb|EBA15030.1| succinyl-CoA synthetase subunit beta [Roseobacter sp. SK209-2-6]
Length = 397
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 234/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
++A+TA +L+ +V+KAQI AGGRG G F D G K GV T +V++ +K
Sbjct: 29 DEAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLTKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEAGSGIQSELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA+TP + + +D G + +A L G +V++ L
Sbjct: 146 VAAETPEKILSFSVDPATGYQPYHGRRVAFSLGLAG-------AQVKQCVKLM------- 191
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F+ D LEINPL+ D+ + +DAK+ FD NA
Sbjct: 192 -------------------GQLYQAFVDKDMEMLEINPLIIADDGNLKVLDAKVGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R ++ + +E DP+E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 VYRHADVAELRDTTEEDPKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV+ GK I++ S + +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEAGKDIINNSDVDVIAADDLSDGAEKIVKAVKG 397
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK I++ S + +I A DL + A + A
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVEAGKDIINNSDVDVIAADDLSDGAEKIVKA 394
>gi|402496996|ref|YP_006556256.1| succinyl-CoA synthetase subunit beta [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650269|emb|CCF78439.1| succinyl-CoA synthetase beta subunit [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 386
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 161/375 (42%), Positives = 224/375 (59%), Gaps = 40/375 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV + ++ +++ MIG L+T QT +G V +V
Sbjct: 44 VVKAQIHAGGRGKA-------GGVRLAKSTEEAQQLVKDMIGMTLLTHQTGPSGQQVKRV 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+ + I +E Y +V D + P I S GG DIE VA +P +K + +D+
Sbjct: 97 YIEEGSTIKKEYYLGLVVDLKLSRPTFIFSSEGGMDIEKVAKSSP--MKIVKLDI----- 149
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
S A A F ++K++ L + K + +
Sbjct: 150 -SPASGFASF-------------------------DSRKLSSSLNLSPEQIKKITSVAKS 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
++N F++ DA Q+EINPL ETD R+ +++DAKI+FDDNA +R I + E E+
Sbjct: 184 VYNAFIATDANQIEINPLAETDSRDFVALDAKIDFDDNALYRHPEIAQLRDYDEEVKEEI 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASK+ L+Y+ MDGNIGC+VNGAGLAMATMDIIK +G +PANFLDVGGG N+E++ +AFR
Sbjct: 244 EASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAKPANFLDVGGGANKEAVTKAFR 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SDSNV+ ILVN+FGGI+ C +A G+V A K + +PLVVRL GTN +EGKRIL++
Sbjct: 304 IILSDSNVRGILVNIFGGIMRCDVVASGIVEAVKGMSIGVPLVVRLSGTNFKEGKRILEK 363
Query: 409 SKLPLIFASDLDEAA 423
S L +I +LDEAA
Sbjct: 364 SGLSIIATDELDEAA 378
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN +EGKRIL++S L +I +LDEAA +
Sbjct: 329 ASGIVEAVKGMSIGVPLVVRLSGTNFKEGKRILEKSGLSIIATDELDEAAQKIV 382
>gi|357026201|ref|ZP_09088307.1| succinyl-CoA synthetase subunit beta [Mesorhizobium amorphae
CCNWGS0123]
gi|355541921|gb|EHH11091.1| succinyl-CoA synthetase subunit beta [Mesorhizobium amorphae
CCNWGS0123]
Length = 397
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 161/385 (41%), Positives = 228/385 (59%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V D+ +M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSVADVVANTNEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ +D
Sbjct: 103 VNRLYIEDGADIERELYLSILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKIITVAVDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + + L+ GD AA + L+ L
Sbjct: 163 KGVTADDVKTLNSALKLDGD----AAKDGGTLFPL------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+N F+ D + LE+NPL+ + +DAK++FD+NA FR ++ + +E D
Sbjct: 194 ----LYNAFVEKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVMELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+ D V+ IL+N+FGGI+ C IA+G++ A K L +PLVVRLEGTN + GK+
Sbjct: 310 AAFKIITRDPAVEGILINIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNAELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L ++ A DLD+AA + A
Sbjct: 370 IINESGLNVVSADDLDDAAKKIVAA 394
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTN + GK+I++ES L ++ A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNAELGKKIINESGLNVVSADDLDDAAKKIVAA 394
>gi|387762363|dbj|BAM15613.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium
gallinaceum]
Length = 456
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 151/387 (39%), Positives = 232/387 (59%), Gaps = 37/387 (9%)
Query: 38 NILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITK 96
NI D++ V+KAQ+L+GGRG+G+F +N F+ GVH N ++ + KM+ + L+TK
Sbjct: 83 NICGDIDL---VVKAQVLSGGRGVGYFKENNFEGGVHICRNSMEVKEVASKMLNNTLVTK 139
Query: 97 QTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLV 156
Q+ G N V + + I +E Y + DR +G +++ S GG+ IE+++ K P +
Sbjct: 140 QSGIEGKKCNTVFICERFYIRKERYVAFLLDRSSDGILLLGSSVGGSSIEDISKKNPDAI 199
Query: 157 KTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRG 216
+ ID+ G++ +++ + + F+ + L+
Sbjct: 200 YKMNIDIKNGLSNGQSREFCEKIGFKNNE--------------------------LDIVS 233
Query: 217 DLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFS 276
D+ + L+ +F D T LEINPL ET++ V+ DAK+NFDDNAEFRQK IF
Sbjct: 234 DI-------IVNLYKIFKKYDCTLLEINPLSETNDGRVLCCDAKLNFDDNAEFRQKEIFE 286
Query: 277 QNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGG 336
+ ++S+ + E++A KYNLNYV +DGNI C+VNGAGLAMAT+D+I LH G P+NFLDVGG
Sbjct: 287 KRDISQENAEEMEAKKYNLNYVSLDGNIACMVNGAGLAMATLDLIVLHNGSPSNFLDVGG 346
Query: 337 GVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEG 396
G E+ I +A +II++++ K +N+ GGI+ C IAKGL+NA K PL++RLEG
Sbjct: 347 GATEKEISEALKIINNNNKAKVCFINILGGIMRCDIIAKGLINATKEVNFKKPLIIRLEG 406
Query: 397 TNVQEGKRILDESKLPLIFASDLDEAA 423
TN +E +R++ ES + I D++ AA
Sbjct: 407 TNQEEAERLIKESNIKCILCQDMNAAA 433
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+NA K PL++RLEGTN +E +R++ ES + I D++ AA
Sbjct: 384 AKGLINATKEVNFKKPLIIRLEGTNQEEAERLIKESNIKCILCQDMNAAA 433
>gi|254452580|ref|ZP_05066017.1| succinyl-CoA synthase, beta subunit [Octadecabacter arcticus 238]
gi|198266986|gb|EDY91256.1| succinyl-CoA synthase, beta subunit [Octadecabacter arcticus 238]
Length = 397
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 238/418 (56%), Gaps = 42/418 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHF 74
PVS + K EDA+TA + +L+ +V+KAQI AGGRG GHF G GV
Sbjct: 18 PVSDGRAVLKA--EDAKTAAS---ELDGPIWVVKAQIHAGGRGKGHFQEAGAGEAGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
T +V + +KM+G L+T QT G VN+V + I E Y ++ DR +
Sbjct: 73 TKSVGEAADEAKKMLGRTLVTHQTGPAGKQVNRVYIEDGAAIESEFYLALLVDRQTSRIG 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
++S GG DIE VAA TP + +D G + +A L G +V+
Sbjct: 133 FVVSTEGGMDIEEVAANTPEKIVNFTVDPATGYQAFHGRRVAFTLGLTGQ-------QVK 185
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
+ NL + L+ F D LEINPL+ T ++
Sbjct: 186 QCINL--------------------------MGLLYKAFTEKDMEMLEINPLIVTKAGDL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+DAK++FD NA +R +I S + +E DP+E+ ASK++LNY+ +DG IGC+VNGAGLA
Sbjct: 220 KVLDAKVSFDGNAIYRHPDIASLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA
Sbjct: 280 MATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+G+V+A K L +PLVVRLEGTNV EGK I++ S L +I A DL D A +V A K
Sbjct: 340 EGVVSAVKEVGLKVPLVVRLEGTNVDEGKAIINNSGLDVIAADDLKDGAEKIVKAVKG 397
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K L +PLVVRLEGTNV EGK I++ S L +I A DL + A + A
Sbjct: 339 AEGVVSAVKEVGLKVPLVVRLEGTNVDEGKAIINNSGLDVIAADDLKDGAEKIVKA 394
>gi|94498754|ref|ZP_01305303.1| succinyl-CoA synthetase, beta subunit [Sphingomonas sp. SKA58]
gi|94421804|gb|EAT06856.1| succinyl-CoA synthetase, beta subunit [Sphingomonas sp. SKA58]
Length = 399
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 165/379 (43%), Positives = 219/379 (57%), Gaps = 36/379 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV N+ ++ M+G+ L+T QT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELAPEAKGGVRLAFNLDEVKAHATDMLGNTLVTIQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y ++ DR + ++S GG DIE VA TP + + +D
Sbjct: 103 VNRLYITDGADIAKEFYLALLVDRATSRIAFVVSTEGGMDIEEVAHSTPEKIHSFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G + +A L GD +AK A +V
Sbjct: 163 SGFQPHHGRAVAAALGLTGD-QAKQAAKV------------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ FL DA Q+E+NPL T++ ++ +DAK+ FD NA FR K+I +++E D
Sbjct: 191 -ASSLYAAFLDTDAEQIEVNPLALTEQGNLLVLDAKVGFDGNAMFRHKDIAELRDLTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
EV+ASKY+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG E +
Sbjct: 250 AAEVEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D VK ILVN+FGGI+ C IA G+V A K LS+PLVVRLEGTNVQEGK
Sbjct: 310 AAFKIILKDPAVKGILVNIFGGIMKCDIIANGIVAAAKEVNLSVPLVVRLEGTNVQEGKD 369
Query: 405 ILDESKLPLIFASDLDEAA 423
IL S LP++ A DL +AA
Sbjct: 370 ILANSGLPIVPADDLGDAA 388
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQEGK IL S LP++ A DL +AA +
Sbjct: 339 ANGIVAAAKEVNLSVPLVVRLEGTNVQEGKDILANSGLPIVPADDLGDAAKKIV 392
>gi|365885120|ref|ZP_09424134.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. ORS 375]
gi|365286244|emb|CCD96665.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. ORS 375]
Length = 398
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 239/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
EDA A K L +V+K+QI AGGRG G F G K GV ++ ++ ++
Sbjct: 29 EDADAAA---KTLGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNAFAKQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I +E Y ++ DR + ++S GG +IE+
Sbjct: 86 MLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + T +D G+ + +A L+ GDL A + +KL
Sbjct: 146 VAHSTPEKIITFSVDPATGVMGHHGRAVAKALKLTGDL----AKQAEKLTT--------- 192
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F++ D LEINPLV T + ++ +DAK++FD NA
Sbjct: 193 --------------------QLYTAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
F+ + + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LFKHPEVVALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGME 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKA 394
>gi|410076572|ref|XP_003955868.1| hypothetical protein KAFR_0B04370 [Kazachstania africana CBS 2517]
gi|372462451|emb|CCF56733.1| hypothetical protein KAFR_0B04370 [Kazachstania africana CBS 2517]
Length = 423
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/404 (42%), Positives = 235/404 (58%), Gaps = 46/404 (11%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNN--VQDIPPILEKMIG 90
+ AT I KDLN + V+KAQ L GGRG GHF ++GF +GV N+ +I KM+G
Sbjct: 45 QEATQIAKDLNCAQVVLKAQALTGGRGKGHFKESGFPTGVKVINSNLSNEIADAASKMLG 104
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ LITKQ+ G V+ V V + +N+ +E Y I+ DR P++I S GG +IE VAA
Sbjct: 105 NHLITKQSGPDGKFVSGVYVVEKINVEKEAYLSILMDREKKVPLIIASKDGGVNIEEVAA 164
Query: 151 KTPHLVKTIPI-DVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
K P + + D+ +GIT A+DIA L F +L L A+ I
Sbjct: 165 KNPDAINKFYVEDLSKGITMDDARDIAKSLNFSKEL---------------LDDTARTIL 209
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETD--------EREVISVDAKI 261
L+ +F+ D+TQ+EINPL E + V+ +DAK
Sbjct: 210 S------------------LYKIFIERDSTQVEINPLSEVSLKTSSGKIKHAVMCMDAKF 251
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGM-DGNIGCLVNGAGLAMATMDI 320
FDDNA F+QK IF ++++ DP E++A K +LN+V + GNIGCLVNGAGLAMATMD+
Sbjct: 252 GFDDNASFKQKEIFEWRDLTQEDPDEIEAKKNDLNFVKLKQGNIGCLVNGAGLAMATMDV 311
Query: 321 IKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNA 380
IKL+GG PANFLD GGG E+I + F +I S+ VK I VN+FGGIV C +AKGLV+A
Sbjct: 312 IKLNGGNPANFLDCGGGATPETIKKGFELIMSNEKVKAIFVNIFGGIVRCDYVAKGLVDA 371
Query: 381 CKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
L +P++ RL+GTN++EG I+ S L + LD AA+
Sbjct: 372 TNELGLKVPIIARLQGTNLEEGLEIIKRSGLKIHSFDQLDPAAA 415
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A LV+A L +P++ RL+GTN++EG I+ S L + LD AA
Sbjct: 365 AKGLVDATNELGLKVPIIARLQGTNLEEGLEIIKRSGLKIHSFDQLDPAA 414
>gi|220921132|ref|YP_002496433.1| succinyl-CoA synthetase subunit beta [Methylobacterium nodulans ORS
2060]
gi|219945738|gb|ACL56130.1| succinyl-CoA synthetase, beta subunit [Methylobacterium nodulans
ORS 2060]
Length = 398
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 231/392 (58%), Gaps = 36/392 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQ 97
++L +V+K+QI AGGRG G F + G K GV +V+++ E+M+G L+T Q
Sbjct: 36 RELGGPLWVVKSQIHAGGRGKGKFKEPEAGEKGGVRLAKSVEEVKTFAEQMLGRTLVTVQ 95
Query: 98 TPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVK 157
T + G VN++ + + +I E Y ++ DR ++S GG DIE VA TP +
Sbjct: 96 TGEAGKQVNRLYIEEGSDIETEFYLSMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIV 155
Query: 158 TIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD 217
T +D GI + +A L G L +A D
Sbjct: 156 TFSVDPATGIMPHHGRAVAKALRLAGPLAKEAE--------------------------D 189
Query: 218 LKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQ 277
L A +L+ F++ D + LEINPL+ T + + +DAKI+FD N+ +R I
Sbjct: 190 LTA-------RLYRAFVAKDMSMLEINPLIVTKDGHLKCLDAKISFDSNSLYRHPEIVQL 242
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
+ +E D +E++ASKY+L Y+ ++G IGC+VNGAGLAMAT+DIIKL+G EPANFLDVGGG
Sbjct: 243 RDTTEEDEKEIEASKYDLAYIALEGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVGGG 302
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
+EE + AF+II++D NVK ILVN+FGGI+ C IA G++ A ++ L +PLVVRLEGT
Sbjct: 303 ASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVRAVGLQVPLVVRLEGT 362
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
NV++GK I+ S L +I A DLD+AA + A
Sbjct: 363 NVEKGKEIIRSSGLNVIPADDLDDAAQKIVAA 394
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A ++ L +PLVVRLEGTNV++GK I+ S L +I A DLD+AA + A
Sbjct: 339 ANGVIAAVRAVGLQVPLVVRLEGTNVEKGKEIIRSSGLNVIPADDLDDAAQKIVAA 394
>gi|84684234|ref|ZP_01012136.1| succinyl-CoA synthetase subunit beta [Maritimibacter alkaliphilus
HTCC2654]
gi|84667987|gb|EAQ14455.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
HTCC2654]
Length = 397
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/405 (41%), Positives = 233/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
E+A+T + +L+ +V+KAQI AGGRG GHF G K GV +V++ +K
Sbjct: 29 EEAKTKAS---ELDGPLWVVKAQIHAGGRGKGHFKEESAGEKGGVRLAKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKQVNRIYIEAGSGIETELYLALLVDRQTSRVSFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + F G ++
Sbjct: 146 VAASTPEKILSFSVDPATG-----------YQPFHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L G + + + L+ +F D LEINPL+ TD ++ +DAK FD NA
Sbjct: 173 IAFALGLEGPQVKQCVSLMGTLYKVFTERDMEMLEINPLIVTDGGDLKVLDAKFGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+RQ +I + + +E D +E++ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LYRQPDIANLRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLE 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV +GK I+ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVDKGKEIIANSGLNVIAADDLKDGAQKIVKAVKG 397
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV +GK I+ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLEVPLVVRLEGTNVDKGKEIIANSGLNVIAADDLKDGAQKIVKA 394
>gi|374572028|ref|ZP_09645124.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. WSM471]
gi|374420349|gb|EHQ99881.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. WSM471]
Length = 398
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 235/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV + ++ ++M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVSEFAKQMLGATLVTIQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y I+ DR + ++S GG +IE+VA +P + T ID
Sbjct: 103 VNRLYIEDGSDIDKEFYLSILVDRETSRVSFVVSTEGGVNIEDVAHNSPEKIVTFSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A+ L+ GDL A + +KL
Sbjct: 163 TGIMGHHGRTVANALKLSGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L+ F++ D + LEINPLV T + ++ +DAK++FDDNA FR + + + +E D
Sbjct: 191 -TAQLYAAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVLALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGSASKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+ A + LS+PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A +LD+AA +V A K
Sbjct: 370 IIRESGLNVVPADNLDDAAQKIVKAVKG 397
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A + A + LS+PLVVRLEGTNV+ GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVTAAVREVGLSVPLVVRLEGTNVELGKKIIRESGLNVVPADNLDDAAQKIVKA 394
>gi|154244447|ref|YP_001415405.1| succinyl-CoA synthetase subunit beta [Xanthobacter autotrophicus
Py2]
gi|154158532|gb|ABS65748.1| succinyl-CoA synthetase, beta subunit [Xanthobacter autotrophicus
Py2]
Length = 410
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/402 (41%), Positives = 230/402 (57%), Gaps = 39/402 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
+DA A L + F V+KAQI AGGRG G F K GV D+ +
Sbjct: 39 QDAEAAAAKLGGIAF---VVKAQIHAGGRGKGKFKELPAEAKGGVRVVKTAADVKANAAE 95
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G+ L+T QT G VN++ + + +I +E Y ++ DR ++S GG DIE
Sbjct: 96 MLGNTLVTIQTGPDGKQVNRLYIEEGASIDKEFYLSMLVDRATARVAFVVSTEGGMDIEE 155
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + T +D AT VQ L +K
Sbjct: 156 VAHATPERIVTFSVD--------------------------PATGVQPLHG-------RK 182
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+A L GDL +A L+ F D + LEINPLV T + ++ +DAK+ FD NA
Sbjct: 183 VAQALGLSGDLAKQAVALTANLYRAFTDKDMSLLEINPLVLTRDDRLVCLDAKVGFDSNA 242
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FR + + SE D +E++AS+Y+L+Y+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 243 LFRHPEVVQLRDESEEDFKEIEASRYDLSYIALDGTIGCMVNGAGLAMATMDIIKLYGRE 302
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + AF+II++D NV+ ILVN+FGGI+ C IA+G++ A + L+
Sbjct: 303 PANFLDVGGGATKEKVTAAFKIITADPNVEGILVNIFGGIMRCDVIAEGVIAAVRQMGLN 362
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
+PLVVRL GTNV+EGK+I+ ES L +I A DLD+AA + A
Sbjct: 363 VPLVVRLAGTNVEEGKKIIRESGLNVIPADDLDDAAQKIVAA 404
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + L++PLVVRL GTNV+EGK+I+ ES L +I A DLD+AA + A
Sbjct: 349 AEGVIAAVRQMGLNVPLVVRLAGTNVEEGKKIIRESGLNVIPADDLDDAAQKIVAA 404
>gi|21673219|ref|NP_661284.1| succinyl-CoA synthetase subunit beta [Chlorobium tepidum TLS]
gi|25453283|sp|Q8KFE7.1|SUCC_CHLTE RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|21646302|gb|AAM71626.1| succinyl-CoA synthetase, beta subunit [Chlorobium tepidum TLS]
Length = 392
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 234/397 (58%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + ++ + V+KAQI AGGRG GV + +++ I +KM+G
Sbjct: 30 EAKQAAEQLFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEVFEIAQKMLG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V ++++ + +NI +E Y I DR + V+++S GG +IE VA
Sbjct: 83 ATLVTHQTGPEGKEVRRLLIEEGMNIDKEFYLGITLDRTTSSNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I +D G+ A+ A FL QG+
Sbjct: 143 ETPEKLLKIHVDPVYGLQGFQARKAAFFLGLQGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+FR +K ++ L+N + ++DA+ EINPLV T E V+++DAKINFDDNA +R
Sbjct: 177 --QFRNGVKF-----IEALYNAYTTIDASLAEINPLVITKEGRVLALDAKINFDDNALYR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
+ +++E DP E +ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG PAN
Sbjct: 230 HSDFHDLRDITEEDPLEYEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDLIQLSGGRPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + +++ + F+II D NVK ILVN+FGGIV C +A G++ A K+ L +P+
Sbjct: 290 FLDVGGGASSKTVEEGFKIILGDKNVKAILVNIFGGIVRCDRVAGGIIEAAKNIGLKVPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN E +++LDES L LI A L +AA V
Sbjct: 350 IVRLEGTNATEAQKMLDESGLNLISAKGLRDAAEKVQ 386
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K+ L +P++VRLEGTN E +++LDES L LI A L +AA
Sbjct: 333 AGGIIEAAKNIGLKVPVIVRLEGTNATEAQKMLDESGLNLISAKGLRDAA 382
>gi|296330824|ref|ZP_06873299.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674342|ref|YP_003866014.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151829|gb|EFG92703.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412586|gb|ADM37705.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 385
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 232/391 (59%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ YV+KAQI AGGRG GV ++ ++ E+++G
Sbjct: 28 AEEAVEKAKNLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K + ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKVVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>gi|88608589|ref|YP_506145.1| succinyl-CoA synthetase subunit beta [Neorickettsia sennetsu str.
Miyayama]
gi|123492186|sp|Q2GEF1.1|SUCC_NEOSM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|88600758|gb|ABD46226.1| succinyl-CoA synthetase, beta subunit [Neorickettsia sennetsu str.
Miyayama]
Length = 392
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/395 (43%), Positives = 234/395 (59%), Gaps = 42/395 (10%)
Query: 31 EDARTA--TNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKM 88
ED T+ L L K + +KAQI AGGRG GV +V++ +KM
Sbjct: 27 EDTETSEIAKSLARLGGKVFAVKAQIHAGGRGKA-------GGVVICRSVEEAIDNTKKM 79
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+G L+T QT G V KV + +I +E Y +V DR + +I S GG DIE +
Sbjct: 80 LGMNLVTHQTSPAGQKVRKVYIEAGQSILKEYYLSMVVDRENAKVAIIASEEGGMDIEEI 139
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
A TP +K + +D+ GI++ A+ I + L LS LAQ I
Sbjct: 140 ARSTPEKIKKVFVDLSIGISDFHARKIG--------------------FELGLS-LAQ-I 177
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
F V+KL+ LF++ DA+Q+EINPL+ + E I++DAK+NFDDNA
Sbjct: 178 KQFTPL-----------VKKLYALFVTRDASQVEINPLIANSKGEFIALDAKLNFDDNAL 226
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+R + ++ E DP+E++A+KYNLNY+ M+G IGC+VNGAGLAMATMDIIK +G P
Sbjct: 227 YRHPDTLELRDLYEEDPKEIEAAKYNLNYIKMEGGIGCMVNGAGLAMATMDIIKYYGASP 286
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG N E + AF+IISSD +V ILVN+FGGI+ C IA+G+V A K L++
Sbjct: 287 ANFLDVGGGANLEQVTNAFKIISSDKHVAGILVNIFGGIMRCDIIAEGIVAAAKDIGLTM 346
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRL GTN G +I++ S L ++ AS+LD+AA
Sbjct: 347 PLVVRLSGTNYSAGIKIIEGSGLNIVTASELDDAA 381
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRL GTN G +I++ S L ++ AS+LD+AA +
Sbjct: 332 AEGIVAAAKDIGLTMPLVVRLSGTNYSAGIKIIEGSGLNIVTASELDDAAQKIV 385
>gi|367471891|ref|ZP_09471489.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. ORS 285]
gi|365275807|emb|CCD83957.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. ORS 285]
Length = 398
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 239/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
ED+ A K L +V+K+QI AGGRG G F G K GV ++ ++ ++
Sbjct: 29 EDSDAAA---KTLGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNAFAKQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I +E Y ++ DR + ++S GG +IE+
Sbjct: 86 MLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + T +D G+ + +A L+ GDL A + +KL
Sbjct: 146 VAHSTPEKIITFSVDPATGVMGHHGRAVAKALKLSGDL----AKQAEKLTT--------- 192
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F++ D LEINPLV T + ++ +DAK++FD NA
Sbjct: 193 --------------------QLYTAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
F+ + + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LFKHPEVVALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGME 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKA 394
>gi|218288278|ref|ZP_03492577.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
acidocaldarius LAA1]
gi|258511357|ref|YP_003184791.1| succinyl-CoA synthetase subunit beta [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|218241637|gb|EED08810.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
acidocaldarius LAA1]
gi|257478083|gb|ACV58402.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 384
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/393 (43%), Positives = 231/393 (58%), Gaps = 41/393 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L K V+KAQI AGGRG GV + +++++ +++G +L+T
Sbjct: 31 AVEAAKELGGKA-VVKAQIHAGGRGKA-------GGVKVSKSLEEVEANARELLGKRLVT 82
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + NI +E Y +V DR V++ S GG +IE VAAK P
Sbjct: 83 HQTGPQGRIVRRLLIEELTNIQKEYYIGLVLDRSQGRLVMMASQEGGVEIEEVAAKHPEK 142
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+T FQ A +A LE
Sbjct: 143 IFRETIDPLTGLTP-----------FQ----------------------ANNLAYKLELP 169
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
D KAA + L+N +++ D + EINPLV T E ++I++DAK+NFDDNA +R I
Sbjct: 170 QDAVKKAAQFMMALYNAYVAKDCSIAEINPLVLTAEGDIIALDAKLNFDDNALYRHPEIV 229
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + E DP+E++ASKY L+Y+ +DGNIGC+VNGAGLAMATMD IK +GGEPANFLDVG
Sbjct: 230 SLRDEDEEDPKEIEASKYGLSYIALDGNIGCMVNGAGLAMATMDTIKYYGGEPANFLDVG 289
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +EE + AF+II SD VK ILVN+FGGI+ C IA G+V A K L PLVVRLE
Sbjct: 290 GGASEEKVTAAFKIILSDPKVKGILVNIFGGIMKCDVIANGVVAAAKQVGLDKPLVVRLE 349
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
GTNV+ GK+IL+ES L L+ A L +AA + A
Sbjct: 350 GTNVEAGKKILNESGLKLVAADSLADAAQKIVA 382
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L PLVVRLEGTNV+ GK+IL+ES L L+ A L +AA +
Sbjct: 328 ANGVVAAAKQVGLDKPLVVRLEGTNVEAGKKILNESGLKLVAADSLADAAQKIV 381
>gi|398826985|ref|ZP_10585206.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. YR681]
gi|398219394|gb|EJN05876.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. YR681]
Length = 398
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 234/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F G K GV + ++ ++M+G L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVTEFAKQMLGATLVTIQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y I+ DR + ++S GG +IE+VA P + T +D
Sbjct: 103 VNRLYIEDGSDIDKEFYLSILVDRETSRVSFVVSTEGGVNIEDVAHNNPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A+ L+ GDL A + +KL
Sbjct: 163 TGIMGHHGRTVANALKLSGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L+ F++ D LEINPLV T + ++ +DAK++FDDN+ FR ++ + + +E D
Sbjct: 191 -TAQLYAAFIAKDMAMLEINPLVVTKQGQLRVLDAKVSFDDNSLFRHPDVLALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGSASKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+ A + LS+PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A +LD+AA +V A K
Sbjct: 370 IIRESGLNVVPADNLDDAAQKIVKAVKG 397
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A + A + LS+PLVVRLEGTNV+ GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVTAAVREVGLSVPLVVRLEGTNVELGKKIIRESGLNVVPADNLDDAAQKIVKA 394
>gi|418033245|ref|ZP_12671722.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|351469393|gb|EHA29569.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
subtilis str. SC-8]
Length = 402
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/391 (42%), Positives = 230/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV ++ ++ E+++G
Sbjct: 45 AEEAVESAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKT 97
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LIT QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 98 LITHQTGPDGQVIKRLLIEEGCDIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKT 157
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 158 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 201
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 202 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 244
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 245 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 304
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 305 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 364
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 365 RLEGTNVDLGKKILSESGLNITSAESMADGA 395
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 346 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 399
>gi|386399612|ref|ZP_10084390.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. WSM1253]
gi|385740238|gb|EIG60434.1| succinyl-CoA synthetase, beta subunit [Bradyrhizobium sp. WSM1253]
Length = 398
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/387 (42%), Positives = 235/387 (60%), Gaps = 37/387 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV + ++ ++M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVSEFAKQMLGATLVTIQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y I+ DR + ++S GG +IE+VA TP + T ID
Sbjct: 103 VNRLYIEDGSDIDKEFYLSILVDRETSRVSFVVSTEGGVNIEDVAHNTPEKIVTFSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A+ L+ GDL A + +KL
Sbjct: 163 TGIMGHHGRTVANALKLSGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L+ F++ D + LEINPLV T + ++ +DAK++FDDNA FR + + + +E D
Sbjct: 191 -TAQLYAAFVAKDMSMLEINPLVVTKQGQLRVLDAKVSFDDNALFRHPEVLALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++LNYV +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGG ++E +
Sbjct: 250 AKEIEASKHDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGSASKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+ A + LS+PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACK 430
I+ ES L ++ A +LD+AA +V A K
Sbjct: 370 IIRESGLNVVPADNLDDAAQKIVKAVK 396
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A + A + LS+PLVVRLEGTNV+ GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVTAAVREVGLSVPLVVRLEGTNVELGKKIIRESGLNVVPADNLDDAAQKIVKA 394
>gi|83944771|ref|ZP_00957137.1| succinyl-CoA synthetase subunit beta [Oceanicaulis sp. HTCC2633]
gi|83851553|gb|EAP89408.1| succinyl-CoA synthetase subunit beta [Oceanicaulis sp. HTCC2633]
Length = 398
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 229/385 (59%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F K GV + +D+ ++M+G+ L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKELPADAKGGVRLAFSKEDVAKNAKEMLGNTLVTHQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I+ E Y ++ +R ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADISTELYLSLLVNRETGQVAFVVSTEGGMDIEQVAEETPEKILTVNIDPT 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T A IA LE +G + R D+ + A
Sbjct: 163 TGVTADDASRIAKALELEG-----------------------------QARDDMLSLAPI 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD NA FR +I +++E D
Sbjct: 194 ----LYKAFTEKDMSLLEINPLIVMENGRLRVLDAKVSFDGNALFRHDDIRELRDLTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 DKEIEASKYDLAYIALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
IL+ES L + A DLD+AA + A
Sbjct: 370 ILNESGLDITSADDLDDAAKKITAA 394
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+IL+ES L + A DLD+AA A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKILNESGLDITSADDLDDAAKKITAA 394
>gi|58584777|ref|YP_198350.1| succinyl-CoA synthetase subunit beta [Wolbachia endosymbiont strain
TRS of Brugia malayi]
gi|75497787|sp|Q5GSB6.1|SUCC_WOLTR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|58419093|gb|AAW71108.1| Succinyl-CoA synthetase, beta subunit [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 386
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 231/393 (58%), Gaps = 43/393 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+A T N LK V+KAQI AGGRG GV + ++ ++ M+G
Sbjct: 29 EEAETKINQLKS---DVLVVKAQIHAGGRGKA-------GGVKLAKSAEEAQQFVKGMLG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V +V + + +I +E Y IV D + P I S GG DIE VA
Sbjct: 79 ITLVTHQTGPNGQQVRRVYIEEGSSIKKEYYLSIVIDPKLSRPAFIFSSEGGMDIEEVAK 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P + + ID ADF F + +KL N+F S Q
Sbjct: 139 NFPTKIVKLDIDYA-----------ADFASF----------DSRKLSNIFNLSPEQ---- 173
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+E K + +++ F++ DA Q+EINPLVET+ + I++DAKI+FDDNA +R
Sbjct: 174 -IE-------KITNVAKNIYDTFIATDANQIEINPLVETNSGDFIALDAKISFDDNALYR 225
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
I + E E++ASK+ L+Y+ MDGNIGC+VNGAGLAMATMDIIK +G EPAN
Sbjct: 226 HPEIVELRDYDEEVKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPAN 285
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++E++ +AF+II SDSNVK ILVN+FGGI+ C IA G+V A K + +PL
Sbjct: 286 FLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVEAAKGMSIKVPL 345
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRL GTN ++GKRIL+ES L +I A +LDEAA
Sbjct: 346 VVRLSGTNFEKGKRILEESGLNIIAADELDEAA 378
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN ++GKRIL+ES L +I A +LDEAA +
Sbjct: 329 ASGIVEAAKGMSIKVPLVVRLSGTNFEKGKRILEESGLNIIAADELDEAAQKIV 382
>gi|347759254|ref|YP_004866815.1| succinyl-CoA synthetase subunit beta [Gluconacetobacter xylinus
NBRC 3288]
gi|347578224|dbj|BAK82445.1| succinyl-CoA synthetase beta subunit [Gluconacetobacter xylinus
NBRC 3288]
Length = 399
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 233/401 (58%), Gaps = 36/401 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIG 90
A A + + L V+KAQI AGGRG GHF + + GV ++ ++ M+G
Sbjct: 28 AAQALDAARSLAAPVTVVKAQIHAGGRGAGHFASNPEGRGGVRLARSLDEVSEAAGAMLG 87
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+TKQT G V + + +I RE YF ++ DR+ V++ SP GG +IE VAA
Sbjct: 88 EILVTKQTGPAGRMVRTLYIESGCDIARELYFSMLVDRVSGQIVIVASPDGGMEIEEVAA 147
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + ID +G+ + ++D+A L G E++ N+
Sbjct: 148 RTPERILKEYIDPAKGLCDYQSRDLAVRLGLTG-------REIRAFQNI----------- 189
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
V+ +N F +DA +EINPLV T +++++DAK++FD+NA FR
Sbjct: 190 ---------------VRSAYNAFTDLDAAIVEINPLVVTGAGDLLALDAKMSFDENALFR 234
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
+ + E DPRE +A+ Y L YVG+DGNIGC+VNGAGLAMATMDIIK+ G EPAN
Sbjct: 235 HPELAKLRDEHEEDPREREAAGYGLAYVGLDGNIGCMVNGAGLAMATMDIIKMEGEEPAN 294
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++E + AFRI+ D V+ ILVN+FGGI+ C IA+ ++ A L++PL
Sbjct: 295 FLDVGGGASKERVAAAFRILIGDPKVRGILVNIFGGIMRCDVIAEAIIAASHETGLNVPL 354
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACK 430
VVRL GTNV+ GK +L ES L +I A DL +AA +V+A +
Sbjct: 355 VVRLAGTNVERGKALLAESGLTIIPADDLGDAARKIVSAVR 395
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +++ A L++PLVVRL GTNV+ GK +L ES L +I A DL +AA + A
Sbjct: 338 AEAIIAASHETGLNVPLVVRLAGTNVERGKALLAESGLTIIPADDLGDAARKIVSA 393
>gi|384921871|ref|ZP_10021832.1| succinyl-CoA synthetase subunit beta [Citreicella sp. 357]
gi|384464286|gb|EIE48870.1| succinyl-CoA synthetase subunit beta [Citreicella sp. 357]
Length = 397
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/403 (41%), Positives = 231/403 (57%), Gaps = 37/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMI 89
A A +L+ +V+KAQI AGGRG G F G K GV +V++ +M+
Sbjct: 28 ANEAKAAAGELDGPLWVVKAQIHAGGRGKGSFKESGAGEKGGVRLAKSVEEAAEEANRML 87
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GH L+T QT G VN+V + +IT E Y ++ DR+ + ++ S GG DIE VA
Sbjct: 88 GHTLVTHQTGPAGKQVNRVYIEDGSDITSEFYLALLVDRVSSRVSIVCSTEGGMDIEEVA 147
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
TP + + ID G + +A F+ L KA + +L
Sbjct: 148 ENTPEKILSFEIDPAIGYQGYHGRRVA----FELGLTGKAVRQCTQL------------- 190
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+ L+ +FL D LEINPL+ T + ++ +D K FD NA +
Sbjct: 191 ----------------IGNLYRMFLDKDMEMLEINPLILTTDGDMKCLDCKAGFDSNALY 234
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R +I + SE DP+E+ AS+++LNY+ +DG IGC+VNGAGLAMATMDIIKL+G EPA
Sbjct: 235 RHSDIMGLRDESEEDPKELAASQHDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPA 294
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L +P
Sbjct: 295 NFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVP 354
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
LVVRLEGTNV GK+I++ES L +I A +L D A +V A K
Sbjct: 355 LVVRLEGTNVDLGKKIINESGLDVIAADNLSDGAEKIVKAVKG 397
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV GK+I++ES L +I A +L + A + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVDLGKKIINESGLDVIAADNLSDGAEKIVKA 394
>gi|398310705|ref|ZP_10514179.1| succinyl-CoA synthetase subunit beta [Bacillus mojavensis RO-H-1]
Length = 385
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 231/391 (59%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV +++++ E+++G
Sbjct: 28 AEEAVEKAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLEEVRAYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>gi|321315375|ref|YP_004207662.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis BSn5]
gi|320021649|gb|ADV96635.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis BSn5]
Length = 385
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/391 (42%), Positives = 230/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV ++ ++ E+++G
Sbjct: 28 AEEAVESAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
LIT QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LITHQTGPDGQVIKRLLIEEGCDIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>gi|89053312|ref|YP_508763.1| succinyl-CoA synthetase subunit beta [Jannaschia sp. CCS1]
gi|122499441|sp|Q28U74.1|SUCC_JANSC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|88862861|gb|ABD53738.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Jannaschia sp.
CCS1]
Length = 397
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/418 (40%), Positives = 236/418 (56%), Gaps = 42/418 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHF 74
PVS K EDA+TA +++ +V+KAQI AGGRG G F D G GV
Sbjct: 18 PVSDGRVVTKA--EDAKTAAG---EMDGPLWVVKAQIHAGGRGKGKFKEADAGEAGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
+ Q+ +KM+G L+T QT G VN++ + I E Y ++ DR +
Sbjct: 73 AKSAQEAADEAKKMLGRTLVTHQTGPVGKQVNRIYIEDGSGIETEMYLALLVDRQSSRIS 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
+ S GG DIE VAA TP + + +D G + +A L +G
Sbjct: 133 FVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPYHGRRVAFSLGLEG----------- 181
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
Q++ ++ G +L+ F D LEINPL+ TDE +
Sbjct: 182 -----------QQVKQCVKLMG-----------QLFTAFQEKDMEMLEINPLIVTDEGNL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+DAK++FD NA +R ++ S + +E DP+E+ ASK++LNY+ +DG IGC+VNGAGLA
Sbjct: 220 KVLDAKVSFDGNAVYRHADVASLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK I VN+FGGI+ C IA
Sbjct: 280 MATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGIFVNIFGGIMRCDIIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+G++ A K L +PLVVRLEGTNV++GK I++ S L +I A DL D A +V A K
Sbjct: 340 EGVIAAVKEVGLQMPLVVRLEGTNVEKGKEIINNSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I++ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLQMPLVVRLEGTNVEKGKEIINNSGLDVIAADDLKDGAQKIVKA 394
>gi|86747406|ref|YP_483902.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
HaA2]
gi|123409066|sp|Q2J3G9.1|SUCC_RHOP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|86570434|gb|ABD04991.1| succinyl-CoA synthetase (ADP-forming) beta subunit
[Rhodopseudomonas palustris HaA2]
Length = 398
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 232/388 (59%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV +V ++ E+M+ L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVDEVKTYAEQMLHATLVTVQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + I +E Y ++ DR + ++S GG IE+VA TP + + +D
Sbjct: 103 VNRLYIEEGSEIDKEFYLSLLVDRATSRISFVVSTEGGMSIEDVAHDTPEKIVSFTVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI +S + +A+ L +GD +A +
Sbjct: 163 TGI---------------------------------MSHHGRAVANALGLKGDQAKQAES 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V KL+ FL+ D LEINPLV T + ++ +DAK++FD N+ +R +I + SE D
Sbjct: 190 LVTKLYTAFLAKDMEMLEINPLVLTKQGDLKCLDAKMSFDGNSLYRHADIQGLRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK IL+N+FGGI+ C IA+G+V A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKEVGLDVPLVVRLEGTNVEAGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ S L ++ A +LD+AA +VNA K
Sbjct: 370 IIKHSGLNVLPADNLDDAAQKIVNAVKG 397
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV+ GK+I+ S L ++ A +LD+AA +
Sbjct: 339 AEGVVAAVKEVGLDVPLVVRLEGTNVEAGKKIIKHSGLNVLPADNLDDAAQKIV 392
>gi|241693179|ref|XP_002411799.1| succinyl-CoA synthetase, beta subunit, putative [Ixodes scapularis]
gi|215504669|gb|EEC14163.1| succinyl-CoA synthetase, beta subunit, putative [Ixodes scapularis]
Length = 425
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 215/354 (60%), Gaps = 33/354 (9%)
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
T+ + I +M+G+ L TKQT + GI V+KVMV + + RE YF ++ +R NGP+
Sbjct: 76 THRPSEAKQISSQMLGYMLRTKQTGEKGIRVDKVMVTERLYNRREYYFALMMEREFNGPL 135
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
++ S GG +IE VA + P + +PI + GI + L F +A E
Sbjct: 136 IVASSQGGVNIEEVAKENPDAILKLPISIDSGIDRDETSKLVKQLGFH-----PSAVE-- 188
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
A T ++ L+N+FL DAT LEINPLVE + +V
Sbjct: 189 --------------------------GAVTLIENLYNVFLKYDATLLEINPLVEDNHGKV 222
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+DAK FDDNA+FRQK++F+ + ++ D RE +A NLNY+ +DG+IGCLVNGAGLA
Sbjct: 223 YCLDAKCRFDDNADFRQKDLFALRDWTQLDEREREAHDCNLNYIALDGDIGCLVNGAGLA 282
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKLHGG PANFLDVGGG + +AFR+I+SD V+ ILVN+FGGI+ C IA
Sbjct: 283 MATMDIIKLHGGSPANFLDVGGGATAHQVTEAFRLITSDQKVQAILVNIFGGIMRCDVIA 342
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
+G++ A ++ L IP+VVRL+GT V E K ++ SKL ++ +LDEAA + +
Sbjct: 343 EGVIRAAETLDLKIPIVVRLQGTQVDEAKALIATSKLKILACDNLDEAAKMASG 396
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A ++ L IP+VVRL+GT V E K ++ SKL ++ +LDEAA
Sbjct: 342 AEGVIRAAETLDLKIPIVVRLQGTQVDEAKALIATSKLKILACDNLDEAA 391
>gi|148252001|ref|YP_001236586.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp. BTAi1]
gi|189046888|sp|A5E936.1|SUCC_BRASB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|146404174|gb|ABQ32680.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bradyrhizobium
sp. BTAi1]
Length = 398
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 239/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
ED+ A K L +V+K+QI AGGRG G F G K GV ++ ++ ++
Sbjct: 29 EDSDAAA---KALGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNAFAKQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I +E Y ++ DR + ++S GG +IE+
Sbjct: 86 MLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + T +D G+ + +A L+ GDL A + +KL
Sbjct: 146 VAHSTPEKIITFSVDPATGVMPHHGRAVAKALKLSGDL----AKQAEKL----------- 190
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F++ D LEINPLV T + ++ +DAK++FD NA
Sbjct: 191 ------------------TIQLYTAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
F+ + + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LFKHPEVVALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGME 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKA 394
>gi|449094301|ref|YP_007426792.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis XF-1]
gi|449028216|gb|AGE63455.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis XF-1]
Length = 402
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 230/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV ++ ++ E+++G
Sbjct: 45 AEEAVESAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKT 97
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 98 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKT 157
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 158 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 201
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 202 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 244
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 245 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 304
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 305 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 364
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 365 RLEGTNVDLGKKILSESGLNITSAESMADGA 395
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 346 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 399
>gi|254512833|ref|ZP_05124899.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
KLH11]
gi|221532832|gb|EEE35827.1| succinyl-CoA synthetase beta chain [Rhodobacteraceae bacterium
KLH11]
Length = 379
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 232/389 (59%), Gaps = 39/389 (10%)
Query: 29 CLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPIL 85
L++A A N L +V+K+QI AGGRG G F K GV + + ++ +
Sbjct: 9 SLDEAEAAINALPG---PVWVVKSQIHAGGRGKGKFKELPEDAKGGVRVSFSPEEAMDNI 65
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
++M G+ L+TKQT +G VN++ + I RE Y ++ +R + S GG DI
Sbjct: 66 KEMFGNTLVTKQTGPSGKQVNRLYIESGAAIDRELYLSLLVNRETGMTSFVASTEGGMDI 125
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VA +TP L+ T+ I QG T+ QD A
Sbjct: 126 ETVAEETPDLIHTVDITPSQGCTD---QD------------------------------A 152
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
K+AD L+ G K +A + L+ F D + LEINPL+ T+ ++ +DAK++FD+
Sbjct: 153 AKLADALKLDGTAKTQAVELFKNLYTAFAEKDMSLLEINPLIVTESNDMQVLDAKVSFDN 212
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FR ++ +++E D +E+ ASKY+L+Y+ +DG IGC+VNGAGLAMATMDIIKL+G
Sbjct: 213 NALFRHSDVQELRDLTEEDEKEIQASKYDLSYIALDGEIGCMVNGAGLAMATMDIIKLYG 272
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
GEPANFLDVGGG E + +AF+II++D NVK ILVN+FGGI+ C IA+G+V A K
Sbjct: 273 GEPANFLDVGGGATTEKVTEAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVEAVKQVG 332
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLI 414
L +PLVVRLEGT V EGK+I++ES L +I
Sbjct: 333 LPVPLVVRLEGTKVNEGKKIINESGLNVI 361
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGT V EGK+I++ES L +I
Sbjct: 321 AEGVVEAVKQVGLPVPLVVRLEGTKVNEGKKIINESGLNVI 361
>gi|425736840|ref|ZP_18855116.1| succinyl-CoA synthetase subunit beta [Staphylococcus massiliensis
S46]
gi|425483312|gb|EKU50464.1| succinyl-CoA synthetase subunit beta [Staphylococcus massiliensis
S46]
Length = 388
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/391 (43%), Positives = 230/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K L YV+KAQI AGGRG GV ++ ++ ++++G +
Sbjct: 28 AQEAVEKAKQLESDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVEDYAKELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA+T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDSVTLMASEEGGTEIEEVAAQT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKESIDPVVGLAPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T E EV+++DAKINFDDNA FR K
Sbjct: 185 -----------------YNVFVEKDCSIVEINPLVTTGEGEVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L +PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELKLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV+ GK+ILDES L + AS + E A
Sbjct: 348 RLEGTNVELGKQILDESGLAIESASTMAEGA 378
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L +PLVVRLEGTNV+ GK+ILDES L + AS + E A +
Sbjct: 329 AEGIVAAVKEVELKLPLVVRLEGTNVELGKQILDESGLAIESASTMAEGAQKIV 382
>gi|319780726|ref|YP_004140202.1| succinyl-CoA synthetase subunit beta [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166614|gb|ADV10152.1| succinyl-CoA synthetase, beta subunit [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 397
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 226/385 (58%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V D+ +M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFTELGPDAKGGVRLAKSVADVVANANEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIERELYLSILVDRSVGRIAFVVSTEGGMDIEAVAHDTPEKIITVAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + DLKA + L+ GD T
Sbjct: 163 KGVTSA-------------DLKA--------------------LNGALKLDGDAAKDGDT 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD+NA FR ++ + +E D
Sbjct: 190 LFPILYKAFVDKDMSLLEVNPLIVMKNGRLRVLDAKVSFDNNALFRHPDVLELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+ D VK IL+N+FGGI+ C IA+G++ A K L +PLVVRLEGTN + GK+
Sbjct: 310 AAFKIITRDPAVKGILINIFGGIMKCDIIAEGVIAAVKEVGLEVPLVVRLEGTNAELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+++S L ++ A DLD+AA + A
Sbjct: 370 IINDSGLNVVSADDLDDAAKKIVAA 394
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTN + GK+I+++S L ++ A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLEVPLVVRLEGTNAELGKKIINDSGLNVVSADDLDDAAKKIVAA 394
>gi|16078672|ref|NP_389491.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309484|ref|ZP_03591331.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313809|ref|ZP_03595614.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318733|ref|ZP_03600027.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323004|ref|ZP_03604298.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
subtilis str. SMY]
gi|384175350|ref|YP_005556735.1| succinyl-CoA synthetase beta chain [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|402775854|ref|YP_006629798.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis QB928]
gi|428279203|ref|YP_005560938.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
natto BEST195]
gi|430758968|ref|YP_007209689.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|452913888|ref|ZP_21962515.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus subtilis
MB73/2]
gi|3183562|sp|P80886.2|SUCC_BACSU RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta; AltName: Full=Vegetative protein 63;
Short=VEG63
gi|2462967|emb|CAA04419.1| putative succinyl-coA synthetase beta chain [Bacillus subtilis
subsp. subtilis str. 168]
gi|2633981|emb|CAB13482.1| succinyl-CoA synthetase (beta subunit) [Bacillus subtilis subsp.
subtilis str. 168]
gi|291484160|dbj|BAI85235.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
natto BEST195]
gi|349594574|gb|AEP90761.1| succinyl-CoA synthetase beta chain [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|402481036|gb|AFQ57545.1| Succinyl-CoA synthetase (beta subunit) [Bacillus subtilis QB928]
gi|407959015|dbj|BAM52255.1| succinyl-CoA synthetase subunit beta [Synechocystis sp. PCC 6803]
gi|407964592|dbj|BAM57831.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis BEST7003]
gi|430023488|gb|AGA24094.1| Succinyl-CoA synthetase beta chain [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|452116308|gb|EME06703.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus subtilis
MB73/2]
Length = 385
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 230/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV ++ ++ E+++G
Sbjct: 28 AEEAVESAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>gi|194333450|ref|YP_002015310.1| succinyl-CoA synthetase subunit beta [Prosthecochloris aestuarii
DSM 271]
gi|226734972|sp|B4S612.1|SUCC_PROA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|194311268|gb|ACF45663.1| succinyl-CoA synthetase, beta subunit [Prosthecochloris aestuarii
DSM 271]
Length = 390
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/406 (42%), Positives = 238/406 (58%), Gaps = 49/406 (12%)
Query: 31 EDARTATNILKDLNFKEY-----VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPIL 85
E+AR A L F+E V+KAQI AGGRG GV + ++ I
Sbjct: 29 EEARQAAEQL----FEEQENPVVVVKAQIHAGGRGKA-------GGVKLAKSPDEVFDIA 77
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
+MIG L+T QT G V +++V + +NI +E Y I DR + V+++S GG +I
Sbjct: 78 RQMIGCTLVTHQTGPEGKEVRRLLVEEGMNIEKEFYVGITLDRATSQNVLMVSTEGGMEI 137
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VA +TP + I I QG+ A+ A FL +GD
Sbjct: 138 ETVAEETPEKLLKIQIHPLQGLQGFQARQAAFFLGLEGD--------------------- 176
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
K + ++F + L+ + ++DA+ EINPLV T E +V+++DAKINFD
Sbjct: 177 -KFKNTVKF-----------ITALYKAYTAIDASIAEINPLVITKEGKVMALDAKINFDS 224
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FR K+ ++SE DP EV+ASK NLNYV +DGN+GC+VNGAGLAMATMD+I+L G
Sbjct: 225 NALFRHKDFLELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAG 284
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
G+PANFLDVGG + E++ + F+II SD NVK IL+N+FGGIV C +A G++ A K
Sbjct: 285 GKPANFLDVGGSASPETVEEGFKIIMSDKNVKAILINIFGGIVRCDRVAGGVIEAAKKVG 344
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKS 431
L +P++VRLEGTN + +++LDES L LI A+ L EAA VN S
Sbjct: 345 LDMPVIVRLEGTNAEIAQKMLDESGLNLIAANGLREAAQKVNEALS 390
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L +P++VRLEGTN + +++LDES L LI A+ L EAA
Sbjct: 333 AGGVIEAAKKVGLDMPVIVRLEGTNAEIAQKMLDESGLNLIAANGLREAAQ 383
>gi|392952803|ref|ZP_10318357.1| succinyl-CoA synthetase subunit beta [Hydrocarboniphaga effusa
AP103]
gi|391858318|gb|EIT68847.1| succinyl-CoA synthetase subunit beta [Hydrocarboniphaga effusa
AP103]
Length = 388
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/396 (41%), Positives = 227/396 (57%), Gaps = 43/396 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E AR A K L ++ V+KAQ+ AG RG GV ++ + + + ++G
Sbjct: 29 EAARAAA---KQLGTEKVVVKAQVHAGARGKA-------GGVKLVDSPEAAEEVAKNLLG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G+ VN V V K NI RE Y + DR V + SP GG DIE VA
Sbjct: 79 KNLVTIQTDAKGLPVNSVYVEKPSNIARELYLSALVDRTQEKIVFMASPDGGMDIEEVAH 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
TP +K + + G+ A+++ FL + +V++ +
Sbjct: 139 NTPERIKHVFVSPTAGLQPYQARELGFFLGLNKE-------QVEQFTKVLTG-------- 183
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L+++F DA+ +EINPL+ T E + ++D K+NFDDNA FR
Sbjct: 184 ------------------LYHIFTERDASLVEINPLIVTKEGNIFALDGKLNFDDNALFR 225
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK I SQ + S+ D RE ASKY+LNYV ++GNIGC+VNGAGLAMATMDI+KLHGG+PAN
Sbjct: 226 QKEIASQRDPSQEDERERLASKYDLNYVTLEGNIGCMVNGAGLAMATMDIVKLHGGQPAN 285
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG E + +AF++I+S VK I +N+FGGIV C IA+G++ A K L IP+
Sbjct: 286 FLDVGGGTTAEKVTEAFKLITSSPEVKAIFINIFGGIVRCDLIAEGIIAAVKQVGLKIPV 345
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
V RL+GTN+++G+ +L ES L + SDL EAA V
Sbjct: 346 VARLQGTNMEKGQALLRESGLAVTPVSDLTEAAQTV 381
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L IP+V RL+GTN+++G+ +L ES L + SDL EAA +
Sbjct: 329 AEGIIAAVKQVGLKIPVVARLQGTNMEKGQALLRESGLAVTPVSDLTEAAQTVV 382
>gi|390448914|ref|ZP_10234528.1| succinyl-CoA synthetase subunit beta [Nitratireductor aquibiodomus
RA22]
gi|389665229|gb|EIM76703.1| succinyl-CoA synthetase subunit beta [Nitratireductor aquibiodomus
RA22]
Length = 398
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 224/370 (60%), Gaps = 36/370 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFTELGADAKGGVRLAKSVEEVVAHTNEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T + + + L+ +GD AA + + L+ +
Sbjct: 163 TGVTADDVKKLNEALKLEGD----AAKDGETLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LE+NPL+ + + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFTEKDMSLLEVNPLIVMENGRLRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPAVEGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLI 414
I++ES L +I
Sbjct: 370 IINESGLNVI 379
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGTNV GK+I++ES L +I
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIINESGLNVI 379
>gi|148556100|ref|YP_001263682.1| succinyl-CoA synthetase subunit beta [Sphingomonas wittichii RW1]
gi|189030215|sp|A5VB78.1|SUCC_SPHWW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|148501290|gb|ABQ69544.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Sphingomonas
wittichii RW1]
Length = 399
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 233/384 (60%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+KAQI AGGRG G F K GV + ++ ++ M+G+ L+T QT + G
Sbjct: 43 WVVKAQIHAGGRGKGKFKELPADAKGGVRLSKSIDEVKANAADMLGNTLVTIQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V +I E Y ++ DR +I+S GG DIE VA TP ++TI ID
Sbjct: 103 VNRLYVTDGADIKSEYYLSMLVDRKTGRIAMIVSTEGGMDIEQVAHDTPEKIRTIVIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G F + +A L+ +GDL +A
Sbjct: 163 EG---------------------------------FQPHHGRAVAFALKLKGDLNKQAVK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+N F++ D + LE+NPLVET + +++ +DAK++FD NA +R +I + + +E D
Sbjct: 190 LAEQLYNAFIATDMSMLEVNPLVETTDGKLLVLDAKVSFDSNALYRHPDILALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++AS+Y+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG +E +
Sbjct: 250 PAEIEASQYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II SD VK ILVN+FGGI+ C IA+G++ A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILSDPAVKGILVNIFGGIMRCDIIAEGIIAAAKEVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
+L S LP++ A DL +AA + A
Sbjct: 370 LLAGSGLPIVAADDLGDAARKIVA 393
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
K LS+PLVVRLEGTNVQ+GK +L S LP++ A DL +AA +
Sbjct: 347 KEVNLSVPLVVRLEGTNVQQGKDLLAGSGLPIVAADDLGDAARKIV 392
>gi|443632722|ref|ZP_21116901.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347545|gb|ELS61603.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 385
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 230/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV ++ ++ E+++G
Sbjct: 28 AEEAVEKAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>gi|386758332|ref|YP_006231548.1| succinyl-CoA synthetase subunit beta [Bacillus sp. JS]
gi|384931614|gb|AFI28292.1| succinyl-CoA synthetase subunit beta [Bacillus sp. JS]
Length = 385
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 230/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV ++ ++ E+++G
Sbjct: 28 AEEAVESAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>gi|344923128|ref|ZP_08776589.1| succinyl-CoA synthetase subunit beta [Candidatus Odyssella
thessalonicensis L13]
Length = 389
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/387 (42%), Positives = 223/387 (57%), Gaps = 40/387 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A ++L +V+KAQI AGGRG GV V D+ +K++G
Sbjct: 28 AEQAEAGAQELGGSVWVVKAQIHAGGRGKA-------GGVILCKTVNDVKAAAQKLLGTT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V KV V NI RE Y +V DR VI S +GG DIE VAAKT
Sbjct: 81 LVTHQTGPKGQVVRKVYVESGCNIDRELYISLVLDRNSGRVAVIASQAGGMDIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + D G ++ + G +K+A L
Sbjct: 141 PEKIVQFSFDPSTG-----------YMPYHG----------------------RKLAYAL 167
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
G+ + + L ++ +D Q+EINPLV T E ++ +DAK++FDDNA FR
Sbjct: 168 GLDGEAHKQMIKLTESLVKCYIDLDCNQIEINPLVVTKEGGLVVLDAKVSFDDNALFRHP 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
I ++ E DP E++A K+ LNYV +DG+IGC+VNGAGLAMATMDIIKLHGGEPANFL
Sbjct: 228 EIEQLRDLDEEDPAEIEAHKHELNYVKLDGSIGCMVNGAGLAMATMDIIKLHGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II +D NVK +LVN+FGGI+ C IA+G+V A K +L +P+VV
Sbjct: 288 DVGGGATKERVSEAFKIILADKNVKAVLVNIFGGIMRCDVIAEGIVAAAKDIQLKVPMVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDL 419
RL+GTN+++G++IL++S L +I DL
Sbjct: 348 RLQGTNMEQGRKILNDSGLKIISEGDL 374
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 515
A +V A K +L +P+VVRL+GTN+++G++IL++S L +I DL
Sbjct: 329 AEGIVAAAKDIQLKVPMVVRLQGTNMEQGRKILNDSGLKIISEGDL 374
>gi|193213142|ref|YP_001999095.1| succinyl-CoA synthetase subunit beta [Chlorobaculum parvum NCIB
8327]
gi|226734934|sp|B3QPP2.1|SUCC_CHLP8 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|193086619|gb|ACF11895.1| succinyl-CoA synthetase, beta subunit [Chlorobaculum parvum NCIB
8327]
Length = 392
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/379 (41%), Positives = 230/379 (60%), Gaps = 40/379 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV + +++ I +KM+G L+T QT G V ++
Sbjct: 48 VVKAQIHAGGRGKA-------GGVKLAKSPEEVYEIAQKMLGTTLVTHQTGPEGKEVRRL 100
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ + +NI +E Y I DR + V+++S GG +IE VA +TP + I ++ G+
Sbjct: 101 LIEEGMNIDKEFYLGITLDRATSCNVLMVSTEGGMEIEKVAEETPEKLLKIQVNPKYGLQ 160
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
A++ A FL QG+ +FR +K +
Sbjct: 161 GFQAREAALFLGMQGE----------------------------QFRNGVKF-----IDA 187
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+ + ++DA+ EINPLV T E V+++DAKINFDDNA +R + +++E DP E
Sbjct: 188 LYKAYTTIDASLAEINPLVVTKEGRVLALDAKINFDDNAMYRHPDFHELRDITEEDPLEY 247
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG+PANFLDVGGG + +++ + F+
Sbjct: 248 EASKSNLNYVRLDGNVGCMVNGAGLAMGTMDLIQLAGGKPANFLDVGGGASPKTVEEGFK 307
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II D NVK ILVNVFGGIV C +A G++ A K+ L++P++VRLEGTN +E +++LDE
Sbjct: 308 IILGDKNVKAILVNVFGGIVRCDRVAGGVIEAAKNIGLTVPVIVRLEGTNAKEAQKMLDE 367
Query: 409 SKLPLIFASDLDEAASLVN 427
S L LI A+ L +AA V
Sbjct: 368 SGLSLIAANGLRDAAEKVQ 386
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K+ L++P++VRLEGTN +E +++LDES L LI A+ L +AA
Sbjct: 333 AGGVIEAAKNIGLTVPVIVRLEGTNAKEAQKMLDESGLSLIAANGLRDAA 382
>gi|223937437|ref|ZP_03629342.1| succinyl-CoA synthetase, beta subunit [bacterium Ellin514]
gi|223893988|gb|EEF60444.1| succinyl-CoA synthetase, beta subunit [bacterium Ellin514]
Length = 401
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 243/429 (56%), Gaps = 42/429 (9%)
Query: 2 EMAFNQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGL 61
E Q ++ + V P + D +A+ L K V+K+QI AGGRG
Sbjct: 5 EYQAKQLLSQYGVAVPPGDVCSTAD-----EAKAIAEKLFAKGEKLVVVKSQIHAGGRGK 59
Query: 62 GHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETY 121
G F +GF+ GV D+ + M+G L+TKQT G V+K++VA + I +E Y
Sbjct: 60 GTFKSGFQGGVKLCKTADDVFEKAKAMLGQVLVTKQTGPEGRLVSKLLVAAAPAIKKELY 119
Query: 122 FCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEF 181
++ DR + P+V++S GG DIE VA KTP + ID G+ + +
Sbjct: 120 LAVLLDRASSRPLVMVSTEGGVDIEEVAEKTPEKIVKETIDPAVGM-----------MPY 168
Query: 182 QGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQL 241
Q A+K+A L +GDL AA + ++ + DA +
Sbjct: 169 Q----------------------ARKLAAALGIKGDLINPAAKLLMGVYRTWWECDAAMV 206
Query: 242 EINPL--VETDERE--VISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNY 297
EINPL +E + + +++VDAK+ DDNA +R KN+ +++E P E++ASK+NLNY
Sbjct: 207 EINPLCIIEGPDGKDTIVAVDAKVGMDDNALYRHKNVQEMRDLAEEAPLEIEASKFNLNY 266
Query: 298 VGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVK 357
+ +DG+I CLVNGAGLAMATMDII+ GG PANFLDVGGG ++E + AF+II SD +VK
Sbjct: 267 IKLDGSIACLVNGAGLAMATMDIIQHFGGNPANFLDVGGGASKEQVTAAFKIILSDPHVK 326
Query: 358 CILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFAS 417
ILVN+FGGI++C IA G+V A + L +PLVVRLEG NV+ GK+ L ES L +I
Sbjct: 327 GILVNIFGGIMDCNVIATGIVAAVRETGLKLPLVVRLEGNNVEAGKKTLKESGLTIISGD 386
Query: 418 DLDEAASLV 426
+ +AA V
Sbjct: 387 SMSDAAQKV 395
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEG NV+ GK+ L ES L +I + +AA + A
Sbjct: 343 ATGIVAAVRETGLKLPLVVRLEGNNVEAGKKTLKESGLTIISGDSMSDAAQKVVKA 398
>gi|193215966|ref|YP_001997165.1| succinyl-CoA synthetase subunit beta [Chloroherpeton thalassium
ATCC 35110]
gi|226734937|sp|B3QWF8.1|SUCC_CHLT3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|193089443|gb|ACF14718.1| succinyl-CoA synthetase, beta subunit [Chloroherpeton thalassium
ATCC 35110]
Length = 392
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 232/397 (58%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A +L + V+KAQI AGGRG GV + + + +MIG
Sbjct: 30 EAKKAAETLLTEQGGGVVVVKAQIHAGGRGKA-------GGVKLVRSADEAFEVATQMIG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V +++V + +NI +E Y I DR + V+++S GG +IE VA
Sbjct: 83 TTLVTHQTGPEGKEVRRLLVEEGMNIEKELYLGITLDRATSCNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I I G+ + A++ A FL +G+
Sbjct: 143 ETPEKLLKIQIHPTLGLQPNQAREAAFFLGLEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+F+ +K +A L+N ++ D + EINPLV T E VI++DAKINFDDNA FR
Sbjct: 177 --QFKNAVKFISA-----LYNAYMKADCSLAEINPLVVTKEGRVIALDAKINFDDNALFR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
K+ + SE DP EV+ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG+PAN
Sbjct: 230 HKDYIDLRDTSEEDPLEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG N +++ + FRII +D NVK ILVN+FGGIV C +A G++ A K+ + +P+
Sbjct: 290 FLDVGGGANPQTVQEGFRIILTDPNVKAILVNIFGGIVRCDRVAGGVIEAAKNIDIHVPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN +++LDES L L+ A L +AA VN
Sbjct: 350 IVRLEGTNADIAQKMLDESGLNLVSAKGLSDAAKKVN 386
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K+ + +P++VRLEGTN +++LDES L L+ A L +AA
Sbjct: 333 AGGVIEAAKNIDIHVPVIVRLEGTNADIAQKMLDESGLNLVSAKGLSDAA 382
>gi|170740403|ref|YP_001769058.1| succinyl-CoA synthetase subunit beta [Methylobacterium sp. 4-46]
gi|168194677|gb|ACA16624.1| succinyl-CoA synthetase, beta subunit [Methylobacterium sp. 4-46]
Length = 398
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 227/392 (57%), Gaps = 36/392 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQ 97
++L +V+K+QI AGGRG G F G K GV ++ ++ E+M+G L+T Q
Sbjct: 36 RELGGPLWVVKSQIHAGGRGKGKFKEAKAGEKGGVRLAKSIDEVKTFAEQMLGRTLVTVQ 95
Query: 98 TPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVK 157
T + G VN++ + +I E Y ++ DR ++S GG DIE VA TP +
Sbjct: 96 TGEAGKQVNRLYIEDGSDIDTEFYLSMLVDRATGRVAYVVSTEGGMDIEQVAHDTPEKIV 155
Query: 158 TIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD 217
T +D G+ + +A L G L +A D
Sbjct: 156 TFSVDPATGVMPHHGRAVAKALGLSGPLAKEAE--------------------------D 189
Query: 218 LKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQ 277
L A +L+ F + D + LEINPL+ T + + +DAKI+FD NA +R I
Sbjct: 190 LTA-------RLYQAFTAKDMSMLEINPLIVTKDGHLKCLDAKISFDSNALYRHPEIVQL 242
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
+ +E D +E++ASKY+L Y+ ++G IGC+VNGAGLAMAT+DIIKL+G EPANFLDVGGG
Sbjct: 243 RDTTEEDEKEIEASKYDLAYIALEGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVGGG 302
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
+EE + AF+II++D NVK ILVN+FGGI+ C IA G++ A K+ L +PLVVRLEGT
Sbjct: 303 ASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIANGVIAAVKAVGLQVPLVVRLEGT 362
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
NV++GK I+ S L +I A DLD+AA + A
Sbjct: 363 NVEKGKEIIRSSGLNVIPADDLDDAAQKIVAA 394
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K+ L +PLVVRLEGTNV++GK I+ S L +I A DLD+AA + A
Sbjct: 339 ANGVIAAVKAVGLQVPLVVRLEGTNVEKGKEIIRSSGLNVIPADDLDDAAQKIVAA 394
>gi|182680503|ref|YP_001834649.1| succinyl-CoA synthetase subunit beta [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636386|gb|ACB97160.1| succinyl-CoA synthetase, beta subunit [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 410
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 225/385 (58%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YVIKAQI AGGRG GHF + G K GV ++ ++ E M L+T QT G
Sbjct: 53 YVIKAQIHAGGRGKGHFKEPEAGEKGGVRLARSLAEVKQAAEAMFDRTLVTVQTGPAGRK 112
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V ++ + +I RE Y ++ DR + ++S GG DIE VA KTP + + ID
Sbjct: 113 VQRLYIEDGCDIAREFYLSLLVDRSTSRISFVVSTEGGMDIEEVAHKTPDKIVSFSIDPV 172
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + A L GD +A T++
Sbjct: 173 TGIEPHHGRAAAVALGLGGD-QAAQITQI------------------------------- 200
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F++ D LE+NPLV T E ++ +DAK++FD NA ++ +I + + +E D
Sbjct: 201 -TTSLYKAFVAKDMAMLEVNPLVLTKEGRLLCLDAKVSFDPNALYKHPDIVALRDENEED 259
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L Y+ +DG IGC+VNGAGLAMATMDIIKL+GG PANFLDVGGG ++E +I
Sbjct: 260 PKEIEASKFDLAYIALDGTIGCMVNGAGLAMATMDIIKLYGGNPANFLDVGGGASKEKVI 319
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV GK
Sbjct: 320 HAFKIITADPQVKGILVNIFGGIMKCDVIAEGIIGAVKEVGLKVPLVVRLEGTNVDLGKV 379
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
+L+ S L +I A DLD+AA + A
Sbjct: 380 LLERSGLDVIPADDLDDAAQKIVAA 404
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV GK +L+ S L +I A DLD+AA + A
Sbjct: 349 AEGIIGAVKEVGLKVPLVVRLEGTNVDLGKVLLERSGLDVIPADDLDDAAQKIVAA 404
>gi|222150041|ref|YP_002550998.1| succinyl-CoA synthetase subunit beta [Agrobacterium vitis S4]
gi|254778425|sp|B9JTS8.1|SUCC_AGRVS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|221737023|gb|ACM37986.1| succinyl-CoA synthetase beta chain [Agrobacterium vitis S4]
Length = 398
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 241/411 (58%), Gaps = 37/411 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
+ V + A A K L YV+K+QI AGGRG G F K GV ++ ++
Sbjct: 20 AEGVAIFSADEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAFSIDEV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ +M+G+ L+T QT G VN++ + +I RE Y ++ DR ++S G
Sbjct: 80 KSHVAEMLGNTLVTNQTGPAGKQVNRLYIEDGADIERELYLSLLVDRAVGQVAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA TP + ++ ID G+T + + + L +G+ KA A +KL+ +
Sbjct: 140 GMDIETVAHDTPEKIISVAIDPEAGVTAANLEALTAALLLEGEAKADA----EKLFPI-- 193
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L+ F+ D LE+NPL+ + +DAK+
Sbjct: 194 ---------------------------LYKAFVEKDMALLEVNPLIVMKNGRMRVLDAKM 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR +++ + + +E D +E++ASKY+L YV +DGNIGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHEDVVALRDKTEEDAKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANFLDVGGG +E + AF+II++D VK ILVN+FGGI+ C IA+G++ A
Sbjct: 287 KLYGAEPANFLDVGGGATKEKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
K L++PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA +V A K+
Sbjct: 347 KDVGLTVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAAVKA 397
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L++PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKDVGLTVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>gi|402773342|ref|YP_006592879.1| succinyl-CoA ligase [Methylocystis sp. SC2]
gi|401775362|emb|CCJ08228.1| Succinyl-CoA ligase [Methylocystis sp. SC2]
Length = 400
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 225/379 (59%), Gaps = 36/379 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F G K GV ++ + ++M+G L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKEASAGDKGGVRIAKSIDEAEAFAKEMLGATLVTLQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + I RE Y ++ DR + ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYIEDGAAIDREFYLSMLIDRSTSRIAYVVSTEGGMDIEKVAHDTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + +++A L GDL +A
Sbjct: 163 TGL---------------------------------MPHHGRQVAAALGLTGDLAKQAGA 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+KL+ F++ D LEINPL+ T + ++ +DAK++F++NA +R ++ + SE D
Sbjct: 190 LTEKLYAAFVAKDMELLEINPLIVTKDGKLRCLDAKVSFENNALYRHPDMVELRDKSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ + GNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG E +
Sbjct: 250 EKEIEASKYDLAYISLPGNIGCMVNGAGLAMATMDIIKLYGEFPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C TIA+G++ A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDTIAEGVIAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLIFASDLDEAA 423
I++ES L +I A DLD+AA
Sbjct: 370 IINESGLNVIPADDLDDAA 388
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L +PLVVRLEGTNV GK+I++ES L +I A DLD+AA
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVDLGKKIINESGLNVIPADDLDDAAQ 389
>gi|298292944|ref|YP_003694883.1| succinyl-CoA synthetase subunit beta [Starkeya novella DSM 506]
gi|296929455|gb|ADH90264.1| succinyl-CoA synthetase, beta subunit [Starkeya novella DSM 506]
Length = 399
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 229/387 (59%), Gaps = 37/387 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F D G K GV + + ++++G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEADAGEKGGVRVVKSAGEAAANAKQILGKTLVTVQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN+V + + +I +E Y + DR + ++S GG DIE VA TP + T ID
Sbjct: 103 VNRVYIEEGSDIDKEFYLSALVDRATSRVAFVVSTEGGMDIEEVAHSTPEKIHTFSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + +A L GDL +A G+L
Sbjct: 163 TGVMPHHGRTVAQALGLSGDLAKQA--------------------------GNL------ 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V KL+ F+ D LE+NPLV T E+ +DAKI+FD N+ +R ++ + + +E D
Sbjct: 191 -VTKLYAAFVGKDMAMLEVNPLVVTKGGELKCLDAKISFDSNSLYRHPDVVALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G PANFLDVGGG EE +
Sbjct: 250 AKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGGATEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK+
Sbjct: 310 AAFKIITADPQVQGILVNIFGGIMKCDVIARGVIAAVKAVGLQVPLVVRLEGTNVEEGKQ 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACK 430
I+ +S L +I A DLD+AA +V A K
Sbjct: 370 IIRDSGLNVIPADDLDDAAQKIVKAVK 396
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K+ L +PLVVRLEGTNV+EGK+I+ +S L +I A DLD+AA + A
Sbjct: 339 ARGVIAAVKAVGLQVPLVVRLEGTNVEEGKQIIRDSGLNVIPADDLDDAAQKIVKA 394
>gi|426401930|ref|YP_007020902.1| succinate-CoA ligase, subunit beta [Candidatus Endolissoclinum
patella L2]
gi|425858598|gb|AFX99634.1| succinate-CoA ligase, beta subunit [Candidatus Endolissoclinum
patella L2]
Length = 389
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 176/398 (44%), Positives = 238/398 (59%), Gaps = 41/398 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + KDL+ + YVIKAQI AGGRG G KS + ++ EKM+ LIT
Sbjct: 31 AVRLAKDLDAQIYVIKAQIHAGGRGKGGGVKVAKS-------IDEVRYEAEKMLNMNLIT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V + V +S NI RE Y ++ DR + VI S GG DIE +A K P
Sbjct: 84 KQTKPEGQRVKCIYVEESSNIARELYISLLVDRATSRIAVIASSEGGVDIEELAEKKPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T+ ID G+ + A+ IA L F+G K N + LA
Sbjct: 144 ILTVSIDPAIGMAQHYARRIAFVLGFRG-----------KQVNFMIEFLA---------- 182
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L++ F S + LEINPL+E +++++DAKI+FDD+A +R + I
Sbjct: 183 ------------RLYDFFTSFNVLLLEINPLIENIAGDIVALDAKIDFDDSALYRHQEIA 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + E DP EV A+KY LNYV ++G+IGC+VNGAGLAMATMDIIKL+GGEPANFLDVG
Sbjct: 231 TMRDEDEEDPIEVKANKYGLNYVKLNGSIGCMVNGAGLAMATMDIIKLYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +E I AF++I SD NVK I++N+FGGI+ C IA+G+V A + L +PLV+RL+
Sbjct: 291 GGATKEQIAAAFKLILSDKNVKGIMINIFGGIMRCDLIAEGIVTAARKINLHVPLVIRLD 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKSF 432
GTNV+ GK+IL S + +I A L+EAAS +V A + F
Sbjct: 351 GTNVENGKQILSNSGMKIISADTLEEAASKIVKAVREF 388
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLV+RL+GTNV+ GK+IL S + +I A L+EAA+ + A
Sbjct: 329 AEGIVTAARKINLHVPLVIRLDGTNVENGKQILSNSGMKIISADTLEEAASKIVKA 384
>gi|254502561|ref|ZP_05114712.1| succinyl-CoA synthetase, beta subunit subfamily [Labrenzia
alexandrii DFL-11]
gi|222438632|gb|EEE45311.1| succinyl-CoA synthetase, beta subunit subfamily [Labrenzia
alexandrii DFL-11]
Length = 399
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 228/393 (58%), Gaps = 36/393 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDI 81
+ V + A A K L +V+K+QI AGGRG G F D K GV ++ ++
Sbjct: 20 AEGVAIFSADEAEAAAKSLPGPLWVVKSQIHAGGRGKGKFKELDAEAKGGVRLAFSLDEV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+M+G+ L+T QT G VN++ + +I RE Y I+ DR P ++S G
Sbjct: 80 KAHAAEMLGNTLVTAQTGDAGKVVNRLYIEDGADIERELYLSILVDRTVGRPAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA +TP + T+PID G+TE+ A + D LE G + Q + LF
Sbjct: 140 GMDIEAVAEETPEKIITLPIDPDTGVTEADAAKLCDALELTGAAR-------QDGFKLF- 191
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L F+ D LE+NPL+ + ++ +DAK+
Sbjct: 192 -------------------------PILHKAFVEKDMALLEVNPLIVMKDGQLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR +I + + +E D +E++ASKY+L YV +DG+IGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHDDIMALRDETEEDAKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANFLDVGGG +E + AF+II+SD NVK ILVN+FGGI+ C IA+G++ A
Sbjct: 287 KLYGAEPANFLDVGGGATKEKVTAAFKIITSDPNVKGILVNIFGGIMRCDIIAEGVLAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 414
L +PLVVRLEGTNV+ GK+I+ ES + +I
Sbjct: 347 TEVGLQVPLVVRLEGTNVELGKKIISESGMNVI 379
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A ++ A L +PLVVRLEGTNV+ GK+I+ ES + +I
Sbjct: 339 AEGVLAAVTEVGLQVPLVVRLEGTNVELGKKIISESGMNVI 379
>gi|374328965|ref|YP_005079149.1| succinyl-CoA synthetase subunit beta [Pseudovibrio sp. FO-BEG1]
gi|359341753|gb|AEV35127.1| Succinyl-CoA synthetase beta chain (SCS-beta) [Pseudovibrio sp.
FO-BEG1]
Length = 401
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 231/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F K GV + ++ +M+G+ L+T QT G
Sbjct: 45 WVVKSQIHAGGRGKGKFKELGPDAKGGVRLAFSKDEVESHANEMLGNTLVTAQTGDAGKV 104
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR + S GG DIE VA TP + T+PI+
Sbjct: 105 VNRLYIEDGADIDRELYLSLLVDRTCGQVAFVASTEGGMDIEEVAHATPEKILTLPINPL 164
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+TE A + D L+ +G+ A + KL+ +
Sbjct: 165 EGVTEEKASALCDTLKLEGE----AREDGMKLFPI------------------------- 195
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D LEINPL+ + + +DAK++FD NA FR ++I + + +E D
Sbjct: 196 ----LYKAFVEKDMALLEINPLIVMENGRLRVLDAKVSFDGNALFRHEDIVALRDKTEED 251
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +E +
Sbjct: 252 EKEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVT 311
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+SD NV+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 312 SAFKIITSDPNVQGILVNIFGGIMRCDVIAEGVLAAVKEVGLQVPLVVRLEGTNVELGKK 371
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES + +I A DLD+AA + A
Sbjct: 372 IINESGMNVIPADDLDDAAQKIVAA 396
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES + +I A DLD+AA + A
Sbjct: 341 AEGVLAAVKEVGLQVPLVVRLEGTNVELGKKIINESGMNVIPADDLDDAAQKIVAA 396
>gi|254470947|ref|ZP_05084350.1| succinyl-CoA synthetase, beta subunit [Pseudovibrio sp. JE062]
gi|211960089|gb|EEA95286.1| succinyl-CoA synthetase, beta subunit [Pseudovibrio sp. JE062]
Length = 399
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 162/385 (42%), Positives = 231/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F K GV + ++ +M+G+ L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKELGPDAKGGVRLAFSKDEVESHANEMLGNTLVTAQTGDAGKV 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR + S GG DIE VA TP + T+PI+
Sbjct: 103 VNRLYIEDGADIDRELYLSLLVDRTCGQVAFVASTEGGMDIEEVAHATPEKILTLPINPL 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+TE A + D L+ +G+ A + KL+ +
Sbjct: 163 EGVTEEKAAALCDTLKLEGE----ARKDGMKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D LEINPL+ + + +DAK++FD NA FR ++I + + +E D
Sbjct: 194 ----LYKAFVEKDMALLEINPLIVMENGRLRVLDAKVSFDGNALFRHEDIVALRDKTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +E +
Sbjct: 250 EKEIEASKHDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+SD NV+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 SAFKIITSDPNVQGILVNIFGGIMRCDVIAEGVLAAVKEVGLQVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES + +I A DLD+AA + A
Sbjct: 370 IINESGMNVIPADDLDDAAQKIVAA 394
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES + +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLQVPLVVRLEGTNVELGKKIINESGMNVIPADDLDDAAQKIVAA 394
>gi|347750512|ref|YP_004858077.1| succinyl-CoA synthetase subunit beta [Bacillus coagulans 36D1]
gi|347583030|gb|AEO99296.1| succinyl-CoA synthetase, beta subunit [Bacillus coagulans 36D1]
Length = 386
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 164/389 (42%), Positives = 231/389 (59%), Gaps = 40/389 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K L + V+KAQI AGGRG GV N+ ++ ++++G L+T
Sbjct: 31 AVEAAKSLGTQVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAQELLGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIQKEYYVGLVLDRATSRVVLMASEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ L FQ A++IA +
Sbjct: 144 IFKETIDPAVGL-----------LPFQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L +A + L+ +F+ D + EINPLV T + +V+++DAK+NFD N FRQ+++
Sbjct: 171 AKLVNQAVKFMTGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNGLFRQQDVL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ E DP+E++ASKY+L+YV +DGNIGC+VNGAGLAMATMDIIK +GG+PANFLDVG
Sbjct: 231 AYRDLEEEDPKEIEASKYDLSYVALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG EE + +AF+II SD VK I VN+FGGI+ C IA G+V A K L IPLVVRLE
Sbjct: 291 GGATEEKVTEAFKIILSDEKVKGIFVNIFGGIMKCDVIASGVVAATKQVGLDIPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAAS 424
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLKIVAAESMADGAQ 379
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K L IPLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 ASGVVAATKQVGLDIPLVVRLEGTNVELGKKILNESGLKIVAAESMADGAQKIV 382
>gi|83592547|ref|YP_426299.1| succinyl-CoA synthetase subunit beta [Rhodospirillum rubrum ATCC
11170]
gi|386349273|ref|YP_006047521.1| succinyl-CoA synthetase subunit beta [Rhodospirillum rubrum F11]
gi|123526923|sp|Q2RV33.1|SUCC_RHORT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|83575461|gb|ABC22012.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Rhodospirillum
rubrum ATCC 11170]
gi|346717709|gb|AEO47724.1| succinyl-CoA synthetase (ADP-forming) subunit beta [Rhodospirillum
rubrum F11]
Length = 399
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 228/397 (57%), Gaps = 36/397 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMI 89
A A + DL YV+K+QI AGGRG GHF G K GV + ++ ++M+
Sbjct: 28 AEEAEKVALDLAGPVYVVKSQIHAGGRGKGHFKEPSAGDKGGVRVVKSTDEVFSNAKQML 87
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+T Q+ G V +V + +I RE Y ++ DR + V+ S GG DIE VA
Sbjct: 88 GATLVTHQSGAEGKEVKRVYIEDGCDIKRELYLSLLVDRATSAVTVMASTEGGMDIEEVA 147
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+P + ID GI+ +++A L +G +++
Sbjct: 148 NHSPEKIFFQAIDQATGISGFHCRNVAFSLGLEG----------------------KQVG 185
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
F + + L+ F D + LEINPLV T + +VI +D K+NFD NA +
Sbjct: 186 AFTKL-----------LSALYKCFTETDCSMLEINPLVVTGDGQVIPLDCKMNFDSNALY 234
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R +I + E DP E++ASK++LNY+ +DG+IGC+VNGAGLAMATMDIIKL GG PA
Sbjct: 235 RHPDIVEYRDEDEEDPMELEASKHDLNYIKLDGSIGCMVNGAGLAMATMDIIKLKGGAPA 294
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG E + AF+II SD NV ILVN+FGGI+ C IA+G++ A + L++P
Sbjct: 295 NFLDVGGGATRERVTAAFKIILSDPNVDGILVNIFGGIMRCDVIAEGVIAAAREVSLNVP 354
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
LVVRLEGTNV+ GK+I+ ES LP+I A +L +AA V
Sbjct: 355 LVVRLEGTNVELGKKIMVESGLPIISADNLADAAEKV 391
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + L++PLVVRLEGTNV+ GK+I+ ES LP+I A +L +AA + A
Sbjct: 339 AEGVIAAAREVSLNVPLVVRLEGTNVELGKKIMVESGLPIISADNLADAAEKVVKA 394
>gi|119356458|ref|YP_911102.1| succinyl-CoA synthetase subunit beta [Chlorobium phaeobacteroides
DSM 266]
gi|189046908|sp|A1BE51.1|SUCC_CHLPD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|119353807|gb|ABL64678.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
phaeobacteroides DSM 266]
Length = 392
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 234/397 (58%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + ++ N VIKAQI AGGRG GV + +++ I ++M+G
Sbjct: 30 EAKQAAIQLFEEQNSPVVVIKAQIHAGGRGKA-------GGVKLAKSPEEVFDIAQQMLG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V +++V + +NI +E Y I DR + V+++S GG +IE VA
Sbjct: 83 ITLVTHQTGPEGKEVRRLLVEEGMNIDKEFYVGITLDRSTSQNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I ++ G+ A+ A FLE +G+
Sbjct: 143 ETPEKLLKIQVNPLFGLQAFQARQAAFFLELEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+F+ +K + L+N + S+DA EINPLV T E V+++DAKINFD NA FR
Sbjct: 177 --QFKNTVKF-----ITALYNAYTSIDAAIAEINPLVVTKEGRVLALDAKINFDSNALFR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
K+ ++SE DP EV+ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG PAN
Sbjct: 230 HKDFLELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGRPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + +++ + F+II SD NVK ILVN+FGGIV C +A G++ A K L +P+
Sbjct: 290 FLDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKVDLHLPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN +++LDES L LI A L +AA V+
Sbjct: 350 IVRLEGTNASIAQKMLDESGLNLIAAKGLHDAAKKVH 386
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L +P++VRLEGTN +++LDES L LI A L +AA
Sbjct: 333 AGGIIEAAKKVDLHLPVIVRLEGTNASIAQKMLDESGLNLIAAKGLHDAA 382
>gi|311068130|ref|YP_003973053.1| succinyl-CoA synthetase subunit beta [Bacillus atrophaeus 1942]
gi|419823890|ref|ZP_14347423.1| succinyl-CoA synthetase subunit beta [Bacillus atrophaeus C89]
gi|310868647|gb|ADP32122.1| succinyl-CoA synthetase subunit beta [Bacillus atrophaeus 1942]
gi|388471927|gb|EIM08717.1| succinyl-CoA synthetase subunit beta [Bacillus atrophaeus C89]
Length = 385
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 233/391 (59%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + L+ YV+KAQI AGGRG GV + +++ E+++G
Sbjct: 28 AEEAVERAEGLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSKEEVKAYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K + ID G+ QG A+KIA +
Sbjct: 141 PEKIKKVVIDPAVGL--------------QG-------------------YQARKIAFSI 167
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+L +AA + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +RQK
Sbjct: 168 NIPKELVGQAAKFMLGLYKAFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GG+PANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATKQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>gi|448103890|ref|XP_004200150.1| Piso0_002724 [Millerozyma farinosa CBS 7064]
gi|359381572|emb|CCE82031.1| Piso0_002724 [Millerozyma farinosa CBS 7064]
Length = 313
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 208/336 (61%), Gaps = 33/336 (9%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+GHKLITKQT G V V + + + E Y + DR P+++ S GG DIE
Sbjct: 1 MLGHKLITKQTGAAGKEVTAVYIVERRDAKTEAYLAFLLDRASQTPMIVASSQGGMDIEG 60
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAAK P+ +KT + + +G+++ LA ++A L F S AQ
Sbjct: 61 VAAKDPNAIKTFSVPLKEGVSDKLAAEVASVLGF--------------------SQEAQ- 99
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
A+AA VQ L+ +F D TQ+EINPL E+ + V+++DAK+ FDDNA
Sbjct: 100 ------------AEAAKTVQNLYKVFTERDCTQVEINPLSESTDSRVLAMDAKLGFDDNA 147
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FRQ+ +FS + ++ DP+E +A+KY LN++ +DGNI +VNGAGLAMATMDIIKL+GGE
Sbjct: 148 SFRQQEVFSWRDTTQEDPQEAEAAKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGE 207
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLD GG ++I +AF +I SD V I VN+FGGIV C +A+GL+ A K+FKL
Sbjct: 208 PANFLDCGGTATPQTIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFKLD 267
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
IP+VVRL+GTN+ + K +++ S L L DLD AA
Sbjct: 268 IPVVVRLQGTNLAKAKELIENSGLKLFAFEDLDPAA 303
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+FKL IP+VVRL+GTN+ + K +++ S L L DLD AA +
Sbjct: 254 AEGLIAATKNFKLDIPVVVRLQGTNLAKAKELIENSGLKLFAFEDLDPAAEKIV 307
>gi|159045418|ref|YP_001534212.1| succinyl-CoA synthetase subunit beta [Dinoroseobacter shibae DFL
12]
gi|157913178|gb|ABV94611.1| succinyl-CoA synthetase beta chain [Dinoroseobacter shibae DFL 12]
Length = 397
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 232/405 (57%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A+TA +++ +V+KAQI AGGRG G F D G K GV +V++ +K
Sbjct: 29 EEAKTAAG---EMDGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLAKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + I E Y ++ DR + + S GG DIE
Sbjct: 86 MLGRTLVTHQTGPAGKTVNRIYIEDGSGIETELYLALLVDRGTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + IA L G +V++ L
Sbjct: 146 VAASTPEKILSFAVDPVTGYQPYHGRRIAFALGLSG-------AQVKQCVKLM------- 191
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+ F+ D LEINPL+ TD ++ +DAK+ FD NA
Sbjct: 192 -------------------GQLYQCFVEKDMEMLEINPLIVTDSGDLKCLDAKMGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R +I + +E DP+E+ ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 IYRHPDIAELRDETEEDPKELAASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGSE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I++ S L +I A +L D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIINSSGLNVIAAENLRDGAEKIVAAVKG 397
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV++GK I++ S L +I A +L + A + A
Sbjct: 339 AEGVVAAVKEVGLQVPLVVRLEGTNVEKGKEIINSSGLNVIAAENLRDGAEKIVAA 394
>gi|407975306|ref|ZP_11156212.1| succinyl-CoA synthetase subunit beta [Nitratireductor indicus C115]
gi|407429391|gb|EKF42069.1| succinyl-CoA synthetase subunit beta [Nitratireductor indicus C115]
Length = 398
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 225/370 (60%), Gaps = 36/370 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVEEVVAHTNEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIFTLAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T + + + + L+ G +AA + + L+ +
Sbjct: 163 AGVTAADVKKLNEALKLDG----QAAKDGETLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LE+NPL+ + + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFTEKDMSLLEVNPLIVMENGRLRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPAVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLI 414
I++ES L +I
Sbjct: 370 IINESGLNVI 379
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGTNV GK+I++ES L +I
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIINESGLNVI 379
>gi|188580840|ref|YP_001924285.1| succinyl-CoA synthetase subunit beta [Methylobacterium populi
BJ001]
gi|179344338|gb|ACB79750.1| succinyl-CoA synthetase, beta subunit [Methylobacterium populi
BJ001]
Length = 398
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 227/385 (58%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV T + ++ +M+G L+T QT + G
Sbjct: 43 WVVKSQIHAGGRGKGTFKGAPAGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I E Y ++ DR ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYIEEGASIASEFYLSMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A L G +AK +A A T
Sbjct: 163 TGIMPHHGRAVAKALGLSGP-QAK------------------------------EAGALT 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
E KL+ F + D + LEINPLV T + + +DAKI+FD NA +R I + + +E D
Sbjct: 192 E--KLYAAFTAKDMSMLEINPLVLTGDGHLKCLDAKISFDSNALYRHPEIVALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G EPANFLDVGGG +EE +
Sbjct: 250 AKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVGGGASEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK
Sbjct: 310 AAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLEGTNVEEGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ S L +I A DLD+AA + A
Sbjct: 370 IIRTSGLNVIPADDLDDAAQKIVAA 394
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K+ L +PLVVRLEGTNV+EGK I+ S L +I A DLD+AA + A
Sbjct: 339 ARGVIAAVKAVGLEVPLVVRLEGTNVEEGKEIIRTSGLNVIPADDLDDAAQKIVAA 394
>gi|296122653|ref|YP_003630431.1| succinyl-CoA synthetase subunit beta [Planctomyces limnophilus DSM
3776]
gi|296014993|gb|ADG68232.1| succinyl-CoA synthetase, beta subunit [Planctomyces limnophilus DSM
3776]
Length = 394
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/376 (42%), Positives = 224/376 (59%), Gaps = 34/376 (9%)
Query: 49 VIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
V+K+QI AGGRG G F + + GV + +D +M+G+ L+T QT + G V
Sbjct: 44 VVKSQIHAGGRGKGRFKEQPEQPGVVLVKSAEDAAANASRMLGNTLVTIQTGEEGKKVQT 103
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
++V + + I RE Y V DR GPV+I+S GG DIE VAA P + T D G+
Sbjct: 104 LLVEQGLKIAREIYAACVVDREVAGPVIIVSSEGGMDIEEVAAHHPEKILTEAFDPVYGL 163
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
A+ +A L +G+ A +K + +
Sbjct: 164 EGYQARKLAFALGLEGN----ALKNAEKFF-----------------------------R 190
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
+L FL D + EINPLV T+E E++++DAK+ FDDNA FR +N+ + +++E +P E
Sbjct: 191 QLSKFFLDNDCSMAEINPLVVTEEGELLALDAKVTFDDNALFRHQNVLAYRDLAEEEPSE 250
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++A K+ L+YV +DGN+GCLVNGAGLAM+TMD+IKLHGGEPANFLDVGGG N + + +AF
Sbjct: 251 IEAQKWGLSYVKLDGNLGCLVNGAGLAMSTMDLIKLHGGEPANFLDVGGGANVDQVTEAF 310
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
RII +D NVK ILVN+FGGI+ C TI L+ A + +PLVVRLEGTNV+ +++L
Sbjct: 311 RIILADKNVKGILVNIFGGIMKCDTIVTALLTAYDKIGIQVPLVVRLEGTNVELARKMLA 370
Query: 408 ESKLPLIFASDLDEAA 423
ES + DL +AA
Sbjct: 371 ESGKKITAGLDLTDAA 386
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 472 SLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
+L+ A + +PLVVRLEGTNV+ +++L ES + DL +AA
Sbjct: 339 ALLTAYDKIGIQVPLVVRLEGTNVELARKMLAESGKKITAGLDLTDAA 386
>gi|336113795|ref|YP_004568562.1| succinyl-CoA synthetase subunit beta [Bacillus coagulans 2-6]
gi|335367225|gb|AEH53176.1| succinyl-CoA synthetase, beta subunit [Bacillus coagulans 2-6]
Length = 386
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/388 (42%), Positives = 230/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K L V+KAQI AGGRG GV N+ ++ ++++G L+T
Sbjct: 31 AVEAAKSLGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAQELLGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIQKEYYVGLVLDRATSRVVLMASEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ L FQ A++IA +
Sbjct: 144 IFKETIDPAVGL-----------LPFQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L +A + L+ +F+ D + EINPLV T + +V+++DAK+NFD N FRQ++I
Sbjct: 171 AKLVNQAVKFMTGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNGLFRQQDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ E DP+E++ASKY+L+YV +DGNIGC+VNGAGLAMATMDIIK +GG+PANFLDVG
Sbjct: 231 AYRDLEEEDPKEIEASKYDLSYVALDGNIGCMVNGAGLAMATMDIIKYYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG EE + +AF+II SD VK I VN+FGGI+ C IA G+V A K L IPLVVRLE
Sbjct: 291 GGATEEKVTEAFKIILSDEKVKGIFVNIFGGIMKCDVIASGVVAATKQVGLDIPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLKIVAAESMADGA 378
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K L IPLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 ASGVVAATKQVGLDIPLVVRLEGTNVELGKKILNESGLKIVAAESMADGAQKIV 382
>gi|350265921|ref|YP_004877228.1| succinyl-CoA synthetase subunit beta [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349598808|gb|AEP86596.1| succinyl-CoA synthetase beta chain [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 385
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 231/391 (59%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ YV+KAQI AGGRG GV ++ ++ ++++G
Sbjct: 28 AEEAVEKAKNLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYADELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>gi|170717677|ref|YP_001784752.1| succinyl-CoA synthetase subunit beta [Haemophilus somnus 2336]
gi|189030246|sp|B0UUF3.1|SUCC_HAES2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|168825806|gb|ACA31177.1| succinyl-CoA synthetase, beta subunit [Haemophilus somnus 2336]
Length = 389
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/404 (40%), Positives = 231/404 (57%), Gaps = 42/404 (10%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
VC E+ A + ++ L+ +++ K QI AGGRG GV + Q++ K
Sbjct: 24 VC-ENVEQALSAIEKLSGSQWIAKCQIHAGGRGKA-------GGVKVVKSAQEVRSFFTK 75
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
+G +L+T QT + G ++++ + I +E Y + DR V + S GG DIE
Sbjct: 76 FLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYLSAIIDRSSQRIVFMASSEGGMDIEE 135
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA KTPHL+ + ID G +++A L G ++Q+ +F
Sbjct: 136 VAEKTPHLLHRVTIDPLVGAMPYQGRELAFKLGLSG-------KQIQQFSQIFC------ 182
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L LF+ D + LEINPLV E+ +DAK+ DDNA
Sbjct: 183 --------------------QLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNA 222
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R ++FS ++++ DPRE +A K+NLNYV +DGNIGC+VNGAGLAM TMDIIKLHGG
Sbjct: 223 LYRHPDLFSMRDLTQEDPREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGR 282
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E +++AF+II +DS VK +LVN+FGGIV C IAKG+V+A +S
Sbjct: 283 PANFLDVGGGATKERVMEAFKIILTDSAVKAVLVNIFGGIVRCDLIAKGIVSAINEIGVS 342
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACK 430
+P++VRLEGTN G+ IL +S L LI + L EAA VNA K
Sbjct: 343 VPVIVRLEGTNADLGREILAQSNLNLIAVNSLTEAAEQAVNAAK 386
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V+A +S+P++VRLEGTN G+ IL +S L LI + L EAA
Sbjct: 329 AKGIVSAINEIGVSVPVIVRLEGTNADLGREILAQSNLNLIAVNSLTEAA 378
>gi|414163025|ref|ZP_11419272.1| succinyl-CoA ligase [ADP-forming] subunit beta [Afipia felis ATCC
53690]
gi|410880805|gb|EKS28645.1| succinyl-CoA ligase [ADP-forming] subunit beta [Afipia felis ATCC
53690]
Length = 398
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/403 (41%), Positives = 240/403 (59%), Gaps = 37/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMI 89
A A K+L +V+K+QI AGGRG G F G K GV +V ++ +++M+
Sbjct: 28 ASDAEAAAKELGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVDEVKTFVQQML 87
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+T QT G VN++ + + +I +E Y + DR + ++S GG DIE VA
Sbjct: 88 GATLVTVQTGPAGKQVNRLYLEEGADIDKEFYLSALVDRETSRIAFVVSTEGGMDIETVA 147
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
TP + T +D GI + +KIA
Sbjct: 148 HDTPEKIVTFSVDPATGI---------------------------------MPHHGRKIA 174
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ +GD +A + V KL+ F+ D + LEINPL+ + + E+ +DAK++FD NA +
Sbjct: 175 QALKLKGDQAKQAESLVSKLYAAFVGKDMSMLEINPLILSKQGELKCLDAKVSFDSNAIY 234
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R ++ + + +E D +E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G PA
Sbjct: 235 RHPDVLALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPA 294
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +EE + AF+II++D NVK ILVN+FGGI+ C IA G+V A K+ L +P
Sbjct: 295 NFLDVGGGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVP 354
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
LVVRLEGTNV+EGK+I+ ES L ++ A DLD+AA +V A K
Sbjct: 355 LVVRLEGTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 482 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
L +PLVVRLEGTNV+EGK+I+ ES L ++ A DLD+AA + A
Sbjct: 351 LKVPLVVRLEGTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKA 394
>gi|389585667|dbj|GAB68397.1| ATP-specific succinyl-CoA synthetase beta subunit [Plasmodium
cynomolgi strain B]
Length = 461
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 224/378 (59%), Gaps = 34/378 (8%)
Query: 47 EYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+ VIKAQIL+GGRG+G+F +N F+ GVH N ++ + KM+ L+TKQT + G
Sbjct: 94 DLVIKAQILSGGRGVGYFKENNFEGGVHICRNSTEVKEVASKMLNKTLVTKQTGEEGKKC 153
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
N V + + I +E Y + DR +G +++ S +GG+ IE ++ + P + + IDV
Sbjct: 154 NTVFICERFYIRKERYVAFLLDRSSDGILLLGSSTGGSSIEEISKRNPDAIHKMNIDVQN 213
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G + A++ + + F+ + + AT+V
Sbjct: 214 GFSHGQAREFCEKIGFK-NTELDIATDV-------------------------------- 240
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+ L+ +F D T LEINP ET++ V+ DAK+NFDDNAE+RQK +F Q ++S+ +
Sbjct: 241 IANLYKIFKRYDCTLLEINPFSETNDGRVLCCDAKLNFDDNAEYRQKEVFQQRDLSQENA 300
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E+ A K+NLNYV +DGNI C+VNGAGLAMAT+D+I LH G P+NFLDVGGG E+ I +
Sbjct: 301 EEIQAKKFNLNYVSLDGNIACMVNGAGLAMATLDLIVLHNGSPSNFLDVGGGATEDEITE 360
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
A +II++++ K +N+ GGI+ C IA+G++ A K L++RLEGTN E +++
Sbjct: 361 ALKIINNNAKAKVCFINILGGIMRCDIIARGIIRAVKDTAFKKALIIRLEGTNQDEAEKL 420
Query: 406 LDESKLPLIFASDLDEAA 423
L ES + +F D++ AA
Sbjct: 421 LRESGIKCVFCQDMNVAA 438
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L++RLEGTN E +++L ES + +F D++ AA
Sbjct: 389 ARGIIRAVKDTAFKKALIIRLEGTNQDEAEKLLRESGIKCVFCQDMNVAA 438
>gi|385809654|ref|YP_005846050.1| succinyl-CoA synthetase subunit beta [Ignavibacterium album JCM
16511]
gi|383801702|gb|AFH48782.1| Succinyl-CoA synthetase subunit beta [Ignavibacterium album JCM
16511]
Length = 404
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/419 (39%), Positives = 237/419 (56%), Gaps = 48/419 (11%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNG-------FKS 70
PV + DK E L+ ++V+K+QI AGGRG G + +
Sbjct: 24 PVKNMAEFDKALAE--------LQARGINQFVVKSQIHAGGRGKGKIYDVRNRENLLLEG 75
Query: 71 GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLH 130
GV FT + EK++G+ L+T QT G V + +A+ ++ +E Y I+ DR
Sbjct: 76 GVKFTTLPEKATEYAEKILGNILVTHQTGPEGKIVKTIFLAEGLDYKKELYLGILLDRSV 135
Query: 131 NGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAA 190
+ V+++S GG +IE VA +TP + ID G+ A+ +A L QG
Sbjct: 136 SKNVIMVSTEGGVEIEKVAEETPEKIIKEWIDPSVGLQNYQARKLAFALGLQG------- 188
Query: 191 TEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETD 250
+ F+ F ++ L+ + DA+ LEINPL+ T+
Sbjct: 189 ---------------EAFKSFIPF-----------IKNLYRAYEETDASLLEINPLIITN 222
Query: 251 EREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNG 310
+ V+++DAK+NFDDNA FR I++ ++ E DP E++ASKYNLNY+ +DGN+GC+VNG
Sbjct: 223 DDRVVALDAKMNFDDNALFRHPEIYAYRDLDEEDPLEIEASKYNLNYIKLDGNVGCMVNG 282
Query: 311 AGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNC 370
AGLAMATMDIIKL GGEPANFLDVGGG N+E++ F+II SD NV+ IL+N+FGGIV C
Sbjct: 283 AGLAMATMDIIKLAGGEPANFLDVGGGANKETVANGFKIILSDPNVRAILINIFGGIVRC 342
Query: 371 ATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
+A+G+++A K + +P+VVRLEGTN +E +L S L A L EAA V +
Sbjct: 343 DRVAQGVIDAAKEMAVKVPIVVRLEGTNAKEAADLLAASDLHFEVAKSLKEAAEKVTSV 401
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +++A K + +P+VVRLEGTN +E +L S L A L EAA
Sbjct: 346 AQGVIDAAKEMAVKVPIVVRLEGTNAKEAADLLAASDLHFEVAKSLKEAA 395
>gi|145219368|ref|YP_001130077.1| succinyl-CoA synthetase subunit beta [Chlorobium phaeovibrioides
DSM 265]
gi|189081768|sp|A4SDL6.1|SUCC_PROVI RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|145205532|gb|ABP36575.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
phaeovibrioides DSM 265]
Length = 391
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 233/401 (58%), Gaps = 40/401 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + ++ + V+KAQI AGGRG GV + ++ I +MIG
Sbjct: 30 EAKQAAEQLFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAYEIASQMIG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V +++V + +NI RE Y I DR + V++IS GG +IE VA
Sbjct: 83 TTLVTHQTGPEGKEVRRLLVEEGMNIDREFYVGITLDRATSQNVLMISTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I +D G+ A++ A FL +G+
Sbjct: 143 ETPDRLLKIQVDPLFGLQGFQAREAAFFLGLEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+FR A + + L+ + S+DA EINPLV T E V+++DAKINFD NA +R
Sbjct: 177 --QFR-----SAVSFIMSLYKAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
K+ +++E DP EV+ASK NLNYV +DGN+GC+VNGAGLAM TMDII+L GG+PAN
Sbjct: 230 HKDFLELRDITEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDIIQLAGGKPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + +++ + F+II SD NVK ILVN+FGGIV C +A G++ A K L++P+
Sbjct: 290 FLDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKIGLNLPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKS 431
+VRLEGTN +++LDES L LI A L +AA V S
Sbjct: 350 IVRLEGTNADIAQKMLDESGLNLIAADGLKDAAQKVTEALS 390
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L++P++VRLEGTN +++LDES L LI A L +AA
Sbjct: 333 AGGIIEAAKKIGLNLPVIVRLEGTNADIAQKMLDESGLNLIAADGLKDAAQ 383
>gi|110597778|ref|ZP_01386062.1| succinyl-CoA synthetase, beta subunit [Chlorobium ferrooxidans DSM
13031]
gi|110340685|gb|EAT59165.1| succinyl-CoA synthetase, beta subunit [Chlorobium ferrooxidans DSM
13031]
Length = 392
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/403 (41%), Positives = 238/403 (59%), Gaps = 41/403 (10%)
Query: 31 EDARTAT-NILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
E+A+TA + ++L+ V+KAQI AGGRG GV + ++ I +++I
Sbjct: 29 EEAKTAAEQLFEELSCPVVVVKAQIHAGGRGKA-------GGVKLAKSAEEAFEIAQQLI 81
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+T QT G V +++V + +NI +E Y I DR + V+++S GG +IE VA
Sbjct: 82 GLTLVTHQTGPEGKEVRRLLVEEGMNIEKEFYVGITLDRSTSQNVLMVSTEGGMEIEKVA 141
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+TP + I ID G+ A++ A FL +G+
Sbjct: 142 EETPEKLLKIQIDPLYGMQGFQAREAAFFLGLEGE------------------------- 176
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
+FR A + L+ + S+DA EINPLV T E +V+++DAKINFDDNA +
Sbjct: 177 ---QFR-----NAVNFISALYKAYTSIDAAIAEINPLVVTKEGKVLALDAKINFDDNALY 228
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R K ++SE DP EV+ASK NLNYV +DGN+GC+VNGAGLAMATMD+I+L GG+PA
Sbjct: 229 RHKEFIELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGKPA 288
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGG + +++ + F+II SD NVK ILVN+FGGIV C +A G++ A L +P
Sbjct: 289 NFLDVGGSASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAATKIGLHLP 348
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSF 432
++VRLEGTN +++LD+S L LI A+ L +AA VN S
Sbjct: 349 VIVRLEGTNAPIAQKMLDDSGLNLISANGLRDAAQKVNKALSM 391
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A L +P++VRLEGTN +++LD+S L LI A+ L +AA
Sbjct: 333 AGGIIEAATKIGLHLPVIVRLEGTNAPIAQKMLDDSGLNLISANGLRDAAQ 383
>gi|407778446|ref|ZP_11125710.1| succinyl-CoA synthetase subunit beta [Nitratireductor pacificus
pht-3B]
gi|407299817|gb|EKF18945.1| succinyl-CoA synthetase subunit beta [Nitratireductor pacificus
pht-3B]
Length = 398
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 224/370 (60%), Gaps = 36/370 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFTELGPDAKGGVRLAKSVEEVVAHTNEMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T + + + L+ G +AA + + L+ +
Sbjct: 163 TGVTADDLKKLNEALKLDG----QAAKDGETLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LE+NPL+ + + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFTEKDMSLLEVNPLIVMENGRLRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 AKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPAVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLI 414
I++ES L +I
Sbjct: 370 IINESGLNVI 379
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGTNV GK+I++ES L +I
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIINESGLNVI 379
>gi|338733576|ref|YP_004672049.1| succinyl-CoA ligase subunit beta [Simkania negevensis Z]
gi|336482959|emb|CCB89558.1| succinyl-CoA ligase [ADP-forming] subunit beta [Simkania negevensis
Z]
Length = 386
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 238/398 (59%), Gaps = 42/398 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A +++ L K+ V+K Q+ AGGRG GV F + +I I + +IG K++
Sbjct: 31 AEQVVQLLGLKQAVVKIQVHAGGRGKA-------GGVKFAKSKDEIVKICKDLIGMKMVN 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT GI +KV++ V+I +E Y + DR + P++I SP GG +IE VA KTP
Sbjct: 84 NQTGPQGIVAHKVLITDPVDIAKEYYLGAIIDRENAVPILIASPEGGMEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +PI + + +A+F+ ++GD + + L
Sbjct: 144 ILKLPIQLDGTVRSYHLVRLANFMGWKGDTAKQGMKTAKAL------------------- 184
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
AKA F+ DA LEINPLVET + ++ +VDAK++ DDNA FRQK I
Sbjct: 185 ----AKA----------FIETDADLLEINPLVETPDGDIWAVDAKLSVDDNALFRQKEIA 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + S+ EV A +Y+L Y+ ++G+IGC+VNGAGLAMATMDII +GG+PANFLDVG
Sbjct: 231 SYFDPSQISSNEVTAKEYDLAYISLEGDIGCMVNGAGLAMATMDIIHHYGGKPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G ++E + + +II +D NVK ILVN+FGGI+NCATIA+G++ A K + +PL+VRLE
Sbjct: 291 GSADKEKVAEGCKIILADPNVKAILVNIFGGIMNCATIAEGVIAAAKELGIKVPLIVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNACKSFK 433
GTNV++G++IL+ES L +I A+ + +AA A +S K
Sbjct: 351 GTNVEQGRKILEESSLKIISATGMADAAE--KAVQSIK 386
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K + +PL+VRLEGTNV++G++IL+ES L +I A+ + +AA
Sbjct: 329 AEGVIAAAKELGIKVPLIVRLEGTNVEQGRKILEESSLKIISATGMADAA 378
>gi|384135050|ref|YP_005517764.1| succinyl-CoA synthetase subunit beta [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289134|gb|AEJ43244.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 398
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/393 (43%), Positives = 232/393 (59%), Gaps = 41/393 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L K V+KAQI AGGRG GV + +++++ +++G +L+T
Sbjct: 45 AVEAAKELGGKA-VVKAQIHAGGRGKA-------GGVKVSKSLEEVEANARELLGKRLVT 96
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + NI +E Y +V DR V++ S GG +IE VAA+ P
Sbjct: 97 HQTGPQGRIVRRLLIEELTNIEKEYYIGLVLDRSQGRLVMMASQEGGVEIEEVAAQHPEK 156
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+T A ++A + L L A K
Sbjct: 157 IFRETIDPLTGLTPFQANNLA--------------------YKLELPQHAVK-------- 188
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
KAA + L+N +++ D + EINPLV T E ++I++DAK+NFDDNA +R I
Sbjct: 189 -----KAAQFMMALYNAYVAKDCSIAEINPLVLTAEGDIIALDAKLNFDDNALYRHPEIV 243
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
S + E DP+E++ASKY L+Y+ +DGNIGC+VNGAGLAMATMD IK +GGEPANFLDVG
Sbjct: 244 SLRDEDEEDPKEIEASKYGLSYIALDGNIGCMVNGAGLAMATMDTIKYYGGEPANFLDVG 303
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +EE + AF+II SD VK ILVN+FGGI+ C IA G+V A K L PLVVRLE
Sbjct: 304 GGASEEKVTAAFKIILSDPKVKGILVNIFGGIMKCDVIANGVVAAAKQVGLDKPLVVRLE 363
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
GTNV+ GK+IL+ES L L+ A L +AA + A
Sbjct: 364 GTNVEAGKKILNESGLKLVAADSLADAAQKIVA 396
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L PLVVRLEGTNV+ GK+IL+ES L L+ A L +AA +
Sbjct: 342 ANGVVAAAKQVGLDKPLVVRLEGTNVEAGKKILNESGLKLVAADSLADAAQKIV 395
>gi|300024733|ref|YP_003757344.1| succinyl-CoA synthetase subunit beta [Hyphomicrobium denitrificans
ATCC 51888]
gi|299526554|gb|ADJ25023.1| succinyl-CoA synthetase, beta subunit [Hyphomicrobium denitrificans
ATCC 51888]
Length = 399
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/391 (42%), Positives = 229/391 (58%), Gaps = 36/391 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A K L +V+KAQI AGGRG G F G K GV ++ ++ E+M+G
Sbjct: 31 AVEAAKKLPGPVWVVKAQIHAGGRGKGKFLEASAGDKGGVRLAKSIDEVKEFAEQMLGKT 90
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G VN++ + I RE Y + DR + I+S +GG +IE+VA +T
Sbjct: 91 LVTVQTGNAGRVVNRLYIEDGSAIDRELYLSALVDRSTSRVAFIVSQAGGMNIEDVAHET 150
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T+ ID G + F G +K+A L
Sbjct: 151 PEKIHTLTIDPATG-----------YQPFHG----------------------RKVAFAL 177
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+GD A V+ L+ + + D + LEINPLV T + ++I +D K+NFD NA +R
Sbjct: 178 GLKGDQVKAAGKLVENLYRMVVEKDMSLLEINPLVVTKDGKLICLDGKMNFDSNALYRHP 237
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
I ++ E D E++ASK++L +V +DGNIGCLVNGAGLAMATMDIIKL+G EPANFL
Sbjct: 238 EIVELRDLGEEDQTEIEASKHDLAFVKLDGNIGCLVNGAGLAMATMDIIKLYGAEPANFL 297
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG ++E + +AF+II +D +VK ILVN+FGGI+ C IA+G++ A + + +PLVV
Sbjct: 298 DVGGGASKEKVREAFKIILADPSVKGILVNIFGGIMRCDIIAEGVIAAAREMDIKVPLVV 357
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L +I A DL +AA
Sbjct: 358 RLEGTNVDLGKKILKESGLKIIPADDLADAA 388
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + + +PLVVRLEGTNV GK+IL ES L +I A DL +AA
Sbjct: 339 AEGVIAAAREMDIKVPLVVRLEGTNVDLGKKILKESGLKIIPADDLADAA 388
>gi|299133570|ref|ZP_07026764.1| succinyl-CoA synthetase, beta subunit [Afipia sp. 1NLS2]
gi|298591406|gb|EFI51607.1| succinyl-CoA synthetase, beta subunit [Afipia sp. 1NLS2]
Length = 398
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 241/403 (59%), Gaps = 37/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMI 89
A A K+L +V+K+QI AGGRG G F G K GV +V ++ +++M+
Sbjct: 28 ASDAEAAAKELGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSVDEVKTFVQQML 87
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+T QT G VN++ + + +I +E Y + DR + ++S GG DIE VA
Sbjct: 88 GATLVTVQTGPVGKQVNRLYLEEGADIDKEFYLSALVDRETSRIAFVVSTEGGMDIEKVA 147
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
TP + T +D GI + +K+A
Sbjct: 148 HDTPEKIVTFSVDPATGI---------------------------------MPHHGRKVA 174
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ +GD +A + V KL+ F++ D + LEINPL+ + + E+ +DAK++FD NA +
Sbjct: 175 QALKLKGDQAKQAESLVSKLYAAFVAKDMSMLEINPLILSKQGELRCLDAKVSFDSNAIY 234
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R ++ + + +E D +E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G PA
Sbjct: 235 RHPDVLALRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPA 294
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +EE + AF+II++D NVK ILVN+FGGI+ C IA G+V A K+ L +P
Sbjct: 295 NFLDVGGGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVP 354
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
LVVRLEGTNV+EGK+I+ ES L ++ A DLD+AA +V A K
Sbjct: 355 LVVRLEGTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 482 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
L +PLVVRLEGTNV+EGK+I+ ES L ++ A DLD+AA + A
Sbjct: 351 LKVPLVVRLEGTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKA 394
>gi|383768659|ref|YP_005447722.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp. S23321]
gi|381356780|dbj|BAL73610.1| succinyl-CoA synthetase subunit beta [Bradyrhizobium sp. S23321]
Length = 398
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 235/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV + ++ ++M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRIAKSAAEVTEFAKQMLGATLVTIQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I +E Y I+ DR + ++S GG +IE+VA +P + T ID
Sbjct: 103 VNRLYIEDGSDIDKEFYLSILVDRETSRVSFVVSTEGGVNIEDVAHNSPEKIVTFSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + +A+ L+ GDL A + +KL
Sbjct: 163 TGIMGHHGRTVANALKLTGDL----AKQAEKL---------------------------- 190
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L+ F++ D LEINPLV T + ++ +DAK++FDDN+ FR + + + +E D
Sbjct: 191 -TAQLYAAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDDNSLFRHPEVLALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++LNYV +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGG ++E +
Sbjct: 250 AKEIEASKHDLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGSASKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+ A + LS+PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVTAAVREVGLSVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I++ES L ++ A +LD+AA +V A K
Sbjct: 370 IINESGLNVVPADNLDDAAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A + A + LS+PLVVRLEGTNV+ GK+I++ES L ++ A +LD+AA + A
Sbjct: 339 AEGVTAAVREVGLSVPLVVRLEGTNVELGKKIINESGLNVVPADNLDDAAQKIVKA 394
>gi|407977604|ref|ZP_11158441.1| succinyl-CoA synthetase subunit beta [Bacillus sp. HYC-10]
gi|407415857|gb|EKF37438.1| succinyl-CoA synthetase subunit beta [Bacillus sp. HYC-10]
Length = 386
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 232/383 (60%), Gaps = 40/383 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
++L YV+KAQI AGGRG GV ++ E+++G L+T QT
Sbjct: 36 EELGSSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP + +
Sbjct: 89 EGREIKRLLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVV 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID G+ A+++A F+ ++ K + K F++SL
Sbjct: 149 IDPAIGLQAYQAREVA----FKINIPTKLVGQAVK----FMTSL---------------- 184
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+N F+ D + EINPLV T + +V+++DAK+NFD NA +RQK+I ++
Sbjct: 185 ---------YNAFIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILEYRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GG+PANFLDVGGG
Sbjct: 236 DEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVGGGATA 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV+
Sbjct: 296 EKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLEGTNVE 355
Query: 401 EGKRILDESKLPLIFASDLDEAA 423
GK+IL ES L + A + + A
Sbjct: 356 LGKKILSESGLNITSAESMADGA 378
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATKQVGLTLPLVVRLEGTNVELGKKILSESGLNITSAESMADGAEKIV 382
>gi|92116165|ref|YP_575894.1| succinyl-CoA synthetase subunit beta [Nitrobacter hamburgensis X14]
gi|122418688|sp|Q1QQR3.1|SUCC_NITHX RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|91799059|gb|ABE61434.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrobacter
hamburgensis X14]
Length = 397
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/388 (40%), Positives = 231/388 (59%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV ++ ++ +M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKQFASQMLGATLVTVQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I +E Y + DR + ++S GG +IE+VA +P + + +D
Sbjct: 103 VNRLYIEEGSDIDKEFYLSALVDRETSRVAFVVSTEGGVNIEDVAHTSPEKIVSFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + +A L +GDL +A V +L+N F++
Sbjct: 163 TGVMSHHGRTVAKALGLRGDLGKQAEKLVAQLYNAFIAK--------------------- 201
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
D LEINPLV T + E+ +DAK++FDDNA +R + + + SE D
Sbjct: 202 ------------DMALLEINPLVVTRQGELRVLDAKVSFDDNALYRHPDAVALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++AS+++L+YV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++ +
Sbjct: 250 AKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMSPANFLDVGGGATKDKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKQVGLNVPLVVRLEGTNVDAGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A DLD+AA +V A K
Sbjct: 370 IIRESGLNVLPADDLDDAAQKIVKAVKG 397
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L++PLVVRLEGTNV GK+I+ ES L ++ A DLD+AA + A
Sbjct: 339 AEGVVAAVKQVGLNVPLVVRLEGTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKA 394
>gi|254781049|ref|YP_003065462.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040726|gb|ACT57522.1| succinyl-CoA synthetase subunit beta [Candidatus Liberibacter
asiaticus str. psy62]
Length = 398
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/408 (41%), Positives = 236/408 (57%), Gaps = 37/408 (9%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPI 84
V + A + +K L YV+K+QI AGGRG G F K GV ++++ +
Sbjct: 23 VVISSVHAAESAIKTLPGPLYVVKSQIHAGGRGKGRFKELPADSKGGVRVESSLKSVISD 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+ +++G LITKQT TG VN V V +I RE Y ++ DR I S GG D
Sbjct: 83 IREILGSTLITKQTGPTGSRVNCVYVEDGADILRELYLSLLVDRTSGMVAFIASTQGGMD 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VA P + + ID G+T ++D+A
Sbjct: 143 IEEVAKDYPQKIFKLLIDPLIGVT---SEDVA---------------------------- 171
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
+ D LE +G + L+ F D + LEINPL+ + +D+KI+FD
Sbjct: 172 --SLCDMLELQGQARIDGGDLFPNLYKAFCDKDMSLLEINPLIIMKNGRLRVLDSKISFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
DNA +R +I +VSE D RE++A ++NL+Y+ +DGNIGC+VNGAGLAMATMDIIKL+
Sbjct: 230 DNALYRHLDIQELRDVSEEDSREIEAKQHNLSYIALDGNIGCMVNGAGLAMATMDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
GG PANFLDVGGG +++ + AF+II+SDS+VK IL+N+FGGI+ C + KG+++A K
Sbjct: 290 GGAPANFLDVGGGADQDKVAAAFKIITSDSSVKGILINIFGGIMRCDVLVKGILSAVKEV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
K++IPLV+RLEG NV G R++ ES L +I A DLD+AA +V+A K
Sbjct: 350 KINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHAVKG 397
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 472 SLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
+++A K K++IPLV+RLEG NV G R++ ES L +I A DLD+AA + A
Sbjct: 341 GILSAVKEVKINIPLVMRLEGANVDIGNRLIAESGLNVITAIDLDDAAQKIVHA 394
>gi|308173571|ref|YP_003920276.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
DSM 7]
gi|384159408|ref|YP_005541481.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
TA208]
gi|384164157|ref|YP_005545536.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
LL3]
gi|384168455|ref|YP_005549833.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
XH7]
gi|307606435|emb|CBI42806.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
DSM 7]
gi|328553496|gb|AEB23988.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
TA208]
gi|328911712|gb|AEB63308.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
LL3]
gi|341827734|gb|AEK88985.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
XH7]
Length = 385
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 229/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + L+ YV+KAQI AGGRG GV ++ E+++G
Sbjct: 28 AEEAVEKAESLSSSVYVVKAQIHAGGRGKA-------GGVKIAKTTDEVKEYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL+ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILNESGLNITSAESMADGA 378
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL+ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILNESGLNITSAESMADGAQKIV 382
>gi|89098658|ref|ZP_01171540.1| succinyl-CoA synthetase subunit beta [Bacillus sp. NRRL B-14911]
gi|89086620|gb|EAR65739.1| succinyl-CoA synthetase subunit beta [Bacillus sp. NRRL B-14911]
Length = 386
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 231/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N+ ++ +++G L+T
Sbjct: 31 AVEAAKELGTEVVVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYASEILGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIQKEYYVGLVLDRATSRVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+T FQ A++IA +
Sbjct: 144 IFKEEIDPVIGLTA-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G L +AA + L+N ++ D + EINPLV T + +V+++DAK+NFD NA +RQK+I
Sbjct: 171 GKLVNQAAKFMLALYNAYIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDI+K +GG+PANFLDVG
Sbjct: 231 EYRDLEEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIAEGVVEAAKQVGLKVPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV GK+IL ES + +I A + + A
Sbjct: 351 GTNVDLGKKILAESDIDIIAADSMSDGA 378
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV GK+IL ES + +I A + + A +
Sbjct: 329 AEGVVEAAKQVGLKVPLVVRLEGTNVDLGKKILAESDIDIIAADSMSDGAEKIV 382
>gi|386814041|ref|ZP_10101265.1| succinyl CoA-synthase beta subunit [planctomycete KSU-1]
gi|386403538|dbj|GAB64146.1| succinyl CoA-synthase beta subunit [planctomycete KSU-1]
Length = 386
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 226/391 (57%), Gaps = 40/391 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A+ + +++ V+KAQ+LA G G+ F N ++ M+G L T
Sbjct: 31 ASKVFREIGCNRCVLKAQVLA-------GGRGKGGGIQFINTPEEAQACAAGMLGSYLTT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT +TGI VN ++V ++++I RE Y I DR P++I+S GG +IE +A KTP
Sbjct: 84 HQTGQTGIKVNYLLVEEALSIQRELYLAITIDRALCTPILIVSSEGGVEIEEIAKKTPDK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PIDV GI L FQ + IA L+
Sbjct: 144 IVKEPIDVFLGI-----------LSFQ----------------------LRCIASRLDIS 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G L K + L+++F+ D + +EINPLV T + E+ ++DAKI+ DDNA +R
Sbjct: 171 GALSIKFNNLITNLFHVFVKNDCSLVEINPLVVTGDEELCALDAKIDVDDNALYRHPEFQ 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + P E A KY L+Y+ +DGNIGCLVNGAGLAMATMDIIK HGGEPANFLDVG
Sbjct: 231 EFIQTQDLSPPEALARKYKLSYISLDGNIGCLVNGAGLAMATMDIIKFHGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G + E + QAF+II SDS VK IL+N+FGGI+ C IA G++ A K + IPLVVRLE
Sbjct: 291 GDASLEQVTQAFKIILSDSKVKAILINIFGGIMKCDIIASGIIQAVKEVGIHIPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GTNV K+IL +S LP++ A D+ EAASLV
Sbjct: 351 GTNVDRAKKILHDSGLPILSAKDMKEAASLV 381
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ ++ A K + IPLVVRLEGTNV K+IL +S LP++ A D+ EAA+ +
Sbjct: 329 ASGIIQAVKEVGIHIPLVVRLEGTNVDRAKKILHDSGLPILSAKDMKEAASLVV 382
>gi|384263057|ref|YP_005418245.1| succinyl-CoA ligase subunit beta [Rhodospirillum photometricum DSM
122]
gi|378404159|emb|CCG09275.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Rhodospirillum
photometricum DSM 122]
Length = 416
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 228/382 (59%), Gaps = 36/382 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG GHF G K GV ++ ++ +M+G+ L+T Q+ G
Sbjct: 60 WVVKSQIHAGGRGKGHFLEEAAGDKGGVRVVRSLDEVQQNAFQMLGNTLVTHQSGPEGKE 119
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V +V + +I RE Y ++ DR + V+ S GG DIE+VAAKTP + ID
Sbjct: 120 VKRVYIEDGCDIKRELYLSLLVDRATSTVTVMASTEGGMDIEDVAAKTPEKITFQAIDPA 179
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI+ + +A L +G +++ F +
Sbjct: 180 TGISGFHCRKVAFSLGLEG----------------------KQVGAFTKL---------- 207
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ L+ F++ D + LEINPLV T + +VI +D K+ FD NA +R I + +E D
Sbjct: 208 -LSSLYTCFIATDCSVLEINPLVVTGDGQVIPLDCKMTFDSNALYRHPEILEFRDEAEED 266
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++AS+++LNYV ++GNIGC+VNGAGLAMATMDIIKL GG PANFLDVGGG E +
Sbjct: 267 PMELEASRHDLNYVKLEGNIGCMVNGAGLAMATMDIIKLKGGAPANFLDVGGGATRERVT 326
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II SD NV+ ILVN+FGGI+ C IA+G++ A + L++PLVVRLEGTNV+ GK+
Sbjct: 327 AAFKIILSDPNVEGILVNIFGGIMRCNVIAEGVIAAAREVSLNVPLVVRLEGTNVELGKQ 386
Query: 405 ILDESKLPLIFASDLDEAASLV 426
I+ +S LP+I A +L +AA V
Sbjct: 387 IMADSGLPIISADNLADAAEKV 408
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + L++PLVVRLEGTNV+ GK+I+ +S LP+I A +L +AA + A
Sbjct: 356 AEGVIAAAREVSLNVPLVVRLEGTNVELGKQIMADSGLPIISADNLADAAEKVVKA 411
>gi|163761408|ref|ZP_02168482.1| succinyl-CoA synthetase subunit beta [Hoeflea phototrophica DFL-43]
gi|162281403|gb|EDQ31700.1| succinyl-CoA synthetase subunit beta [Hoeflea phototrophica DFL-43]
Length = 398
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/395 (41%), Positives = 230/395 (58%), Gaps = 40/395 (10%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
+ V + A A K L YV+K+QI AGGRG G F K GV ++ +
Sbjct: 20 AEGVAIFSADEAEAAAKSLPGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAFSIDEA 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+M+G+ L+TKQT + G VN++ + +I RE Y I+ DR ++S G
Sbjct: 80 KAHAAEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILVDRTVGQVAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQG--DLKAKAATEVQKLWNL 199
G DIE VA +TP + T+ ID G+T AD + G +L +AA + +KL+ +
Sbjct: 140 GMDIEAVAEETPEKIITVAIDPEAGVTA------ADLAKLNGALELTGEAAADGEKLFPI 193
Query: 200 FLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDA 259
L+ F+ D LE+NPL+ + + +DA
Sbjct: 194 -----------------------------LYKAFVEKDMALLEVNPLIVMKDGRLRVLDA 224
Query: 260 KINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMD 319
K++FD+NA FR +I + +++E D +E++ASKY+L YV +DGNIGC+VNGAGLAMATMD
Sbjct: 225 KVSFDNNALFRHDDIVALRDLTEEDAKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMD 284
Query: 320 IIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVN 379
IIKL+G EPANFLDVGGG +E + AF+II++D VK ILVN+FGGI+ C IA+G+V
Sbjct: 285 IIKLYGQEPANFLDVGGGATKEKVTAAFKIITADPAVKGILVNIFGGIMKCDVIAEGVVA 344
Query: 380 ACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 414
A K L +PLVVRLEGTNV GK+I++ES L +I
Sbjct: 345 AVKEVGLKVPLVVRLEGTNVALGKKIINESGLDVI 379
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGTNV GK+I++ES L +I
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVALGKKIINESGLDVI 379
>gi|163851071|ref|YP_001639114.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
PA1]
gi|163662676|gb|ABY30043.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
PA1]
Length = 398
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 223/385 (57%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV T + ++ +M+G L+T QT + G
Sbjct: 43 WVVKSQIHAGGRGKGTFKGAPEGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I E Y ++ DR ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYIEEGASIAAEFYLSMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + + +A L G +A
Sbjct: 163 TGI---------------------------------MPHHGRAVAKALGLSGPQAKEAGA 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+KL+ F + D + LEINPLV T + + +DAKI+FD NA +R I + + +E D
Sbjct: 190 LTEKLYAAFTAKDMSMLEINPLVLTGDGGLKCLDAKISFDSNALYRHPEIVALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G EPANFLDVGGG +EE +
Sbjct: 250 AKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVGGGASEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK
Sbjct: 310 AAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLEGTNVEEGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ S L +I A DLD+AA + A
Sbjct: 370 IIRNSGLNVIPADDLDDAAQKIVAA 394
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K+ L +PLVVRLEGTNV+EGK I+ S L +I A DLD+AA + A
Sbjct: 339 ARGVIAAVKAVGLEVPLVVRLEGTNVEEGKEIIRNSGLNVIPADDLDDAAQKIVAA 394
>gi|407787762|ref|ZP_11134901.1| succinyl-CoA synthetase subunit beta [Celeribacter baekdonensis
B30]
gi|407199041|gb|EKE69065.1| succinyl-CoA synthetase subunit beta [Celeribacter baekdonensis
B30]
Length = 397
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 238/423 (56%), Gaps = 42/423 (9%)
Query: 15 LVKPVSTVHSTDKVCLE--DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFK 69
L+K S +V L DA+TA +L+ +V+KAQI AGGRG G F G K
Sbjct: 11 LLKEYGAPVSDGRVVLNAADAKTAAG---ELDGPLWVVKAQIHAGGRGKGTFKEAGAGEK 67
Query: 70 SGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRL 129
GV +V++ M+GH L+T QT G VN++ + +I RE Y ++ DR
Sbjct: 68 GGVRLAKSVEEAAKEANAMLGHTLVTHQTGPAGKQVNRIYIEDGSDIARELYLALLVDRQ 127
Query: 130 HNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKA 189
+ ++ S GG DIE VA TP + + +D G+ F G
Sbjct: 128 SSRVSIVCSTEGGMDIEEVAENTPDKILSFSVDPATGLQG-----------FHG------ 170
Query: 190 ATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET 249
+++A L G + + +Q L+ LF+ D LEINPL+ T
Sbjct: 171 ----------------RRVAFALGLEGKQIKQCSQLIQNLYRLFVEKDMEMLEINPLIVT 214
Query: 250 DEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVN 309
++ +D K FD NA +R +I + +E DP+E+ AS+++LNY+ +DG IGC+VN
Sbjct: 215 PAGDIKCLDCKAGFDGNALYRHPDIVGLRDETEEDPKELAASQHDLNYIALDGEIGCMVN 274
Query: 310 GAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVN 369
GAGLAMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+
Sbjct: 275 GAGLAMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMR 334
Query: 370 CATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNA 428
C IA+G++ A K L++PLVVRLEGTNV+ GK I+ S L +I A +L D A +V A
Sbjct: 335 CDVIAEGVIAAVKDVGLTVPLVVRLEGTNVELGKEIIKNSGLNVIAADNLKDGAQKIVKA 394
Query: 429 CKS 431
K
Sbjct: 395 VKG 397
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L++PLVVRLEGTNV+ GK I+ S L +I A +L + A + A
Sbjct: 339 AEGVIAAVKDVGLTVPLVVRLEGTNVELGKEIIKNSGLNVIAADNLKDGAQKIVKA 394
>gi|70726669|ref|YP_253583.1| succinyl-CoA synthetase subunit beta [Staphylococcus haemolyticus
JCSC1435]
gi|77417491|sp|Q4L5U8.1|SUCC_STAHJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|68447393|dbj|BAE04977.1| succinyl-CoA synthetase (beta subunit) [Staphylococcus haemolyticus
JCSC1435]
Length = 388
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/394 (42%), Positives = 233/394 (59%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ + YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELDTEIYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T E EV+++DAKINFDDNA FR K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTGEGEVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 348 RLEGTNVERGKEILNESGLAIEPAATMAEGAQKI 381
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILNESGLAIEPAATMAEGAQKIV 382
>gi|386714319|ref|YP_006180642.1| succinyl-CoA synthetase subunit beta [Halobacillus halophilus DSM
2266]
gi|384073875|emb|CCG45368.1| succinyl-CoA synthetase beta subunit [Halobacillus halophilus DSM
2266]
Length = 386
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 226/375 (60%), Gaps = 40/375 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV N+ D+ E+++G L+T QT G V ++
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKNLDDVRTYAEEILGKTLVTHQTGPEGKEVKRL 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ + +I E Y +V DR + ++ S GGT+IE VA KTP + ID G+T
Sbjct: 97 LIEEGCDIQSEYYVGLVLDRATSKITMMASEEGGTEIEEVAEKTPEKIFKEVIDPVTGLT 156
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
FQ A+++A + + KA +
Sbjct: 157 -----------PFQ----------------------ARRLAFNINIPKEALGKAVKFMLG 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+++F+ D + EINPLV T + EV+++D+K+NFDDNA FRQK++ ++ E DP+EV
Sbjct: 184 LYDVFVKKDCSVAEINPLVTTGDGEVLALDSKLNFDDNALFRQKDVAELRDLEEEDPKEV 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASKY+L+Y+ +DGNIGC+VNGAGLAMATMD IK + G+PANFLDVGGG E + +AF+
Sbjct: 244 EASKYDLSYIALDGNIGCMVNGAGLAMATMDTIKHYKGDPANFLDVGGGATTEKVTEAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV++GK+ILDE
Sbjct: 304 IILSDDNVKGIYVNIFGGIMKCDVIAEGVVEATKQIGLTLPLVVRLEGTNVEQGKKILDE 363
Query: 409 SKLPLIFASDLDEAA 423
S L + A + E A
Sbjct: 364 SGLNITSADSMAEGA 378
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV++GK+ILDES L + A + E A +
Sbjct: 329 AEGVVEATKQIGLTLPLVVRLEGTNVEQGKKILDESGLNITSADSMAEGAQKIV 382
>gi|428229509|dbj|BAM71690.1| putative succinyl-CoA synthetase subunit beta [uncultured
Aquificaceae bacterium]
Length = 388
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 232/392 (59%), Gaps = 40/392 (10%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
D + A ++L V+KAQI AGGRG GV +++++ I ++ G
Sbjct: 27 DVKEAVEAAEELGTWPVVVKAQIHAGGRGKA-------GGVKLAKSIEEVQQIASQLFGK 79
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
KL+T QT G+ V+++ + K I +E Y I DR + P++++S SGG +IE VAA
Sbjct: 80 KLVTFQTGPEGLPVSRLYIEKGTAIDKEYYVAITLDRSKSKPIIMVSASGGMEIEEVAAT 139
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
P + T I+ G+ A+++A L +L KAA NLF++
Sbjct: 140 NPEAIITHTIEPFIGLRSYHARELALKLGLPKNLLNKAA-------NLFMT--------- 183
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
L+ +++ +DA+ +EINPLV T + +I +DAKI+FDDN F+
Sbjct: 184 -----------------LYKIYIELDASMVEINPLVLTKDGNLIILDAKIDFDDNGLFKH 226
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
I ++ ++ P EV+A K+NLNY+ +DGNI C+VNGAGLAM+TMD IKL GGEPANF
Sbjct: 227 PEIMEMDDPTQISPLEVEAKKFNLNYIKLDGNIACMVNGAGLAMSTMDTIKLAGGEPANF 286
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGG N I AF+II SD NVK I +N+FGGI+ C +A+G++ A K +++P++
Sbjct: 287 LDVGGSANATQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIITAAKEVSINVPVI 346
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VR+EGTNV+ GK++L+ES LPLI A + E A
Sbjct: 347 VRMEGTNVELGKKMLEESGLPLITADTMWEGA 378
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K +++P++VR+EGTNV+ GK++L+ES LPLI A + E A
Sbjct: 329 AEGIITAAKEVSINVPVIVRMEGTNVELGKKMLEESGLPLITADTMWEGA 378
>gi|418324163|ref|ZP_12935414.1| succinate-CoA ligase, beta subunit [Staphylococcus pettenkoferi
VCU012]
gi|365227660|gb|EHM68852.1| succinate-CoA ligase, beta subunit [Staphylococcus pettenkoferi
VCU012]
Length = 388
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/400 (41%), Positives = 236/400 (59%), Gaps = 41/400 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K+LN YV+KAQI AGGRG GV ++ ++ ++++G +
Sbjct: 28 AEEAVDKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVETYAKELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA+T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAET 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA +N+ +
Sbjct: 141 PEKIFKETIDPVVGLAPYQARRIA--------------------FNINIPK--------- 171
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KAA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 172 ----ESIGKAAKFLMALYNVFIEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIMELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGRPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
RLEGTNV+ GK ILD S L + A+ + E A +VN K
Sbjct: 348 RLEGTNVERGKEILDNSGLAIEPATTMAEGAQKIVNNVKE 387
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK ILD S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILDNSGLAIEPATTMAEGAQKIV 382
>gi|87308498|ref|ZP_01090639.1| succinyl-CoA synthetase (beta subunit) [Blastopirellula marina DSM
3645]
gi|87289055|gb|EAQ80948.1| succinyl-CoA synthetase (beta subunit) [Blastopirellula marina DSM
3645]
Length = 394
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/394 (42%), Positives = 229/394 (58%), Gaps = 34/394 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLI 94
A ++L K V+KAQI AGGRG G DN + GV + + + ++G +L+
Sbjct: 31 AAKAYEELGGKIAVVKAQIHAGGRGKGTVKDNADQRGVQLVKSADEAKAVAAALLGKELV 90
Query: 95 TKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPH 154
T QT G V++V+V + +I RE Y IV DR PV+++S GGT+IE VAA +P
Sbjct: 91 TIQTGPEGKLVSQVLVEEGCDIARELYMGIVLDRAAAKPVLMMSSEGGTEIEEVAAHSPE 150
Query: 155 LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEF 214
L+ D +G A +V+KL L
Sbjct: 151 LILKEHFDPSRG---------------------PDAFQVRKLCK------------KLGI 177
Query: 215 RGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNI 274
G A +Q L +++ D + LEINPLV T ++I++D K+NFD N FR I
Sbjct: 178 EGATIKSAYKFIQGLCKVYVDTDCSLLEINPLVITGSGDMIALDCKMNFDTNGLFRHPKI 237
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
++SE +P EV A+ L+YV ++GNIGCLVNGAGLAMATMDIIKLHGGEP+NFLDV
Sbjct: 238 VELRDLSEEEPAEVKAADTGLSYVKLEGNIGCLVNGAGLAMATMDIIKLHGGEPSNFLDV 297
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GGG N + + +AFRI+ +D NVK +LVN+FGGI+ C TIA +V A KS ++PLVVRL
Sbjct: 298 GGGANVDQVTEAFRILLADKNVKAVLVNIFGGIMRCTTIATAVVEAYKSVGFNVPLVVRL 357
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
EGT V++G++IL ES +P+I L +AA V A
Sbjct: 358 EGTEVEQGRKILSESGIPIIIGDGLTDAAKKVVA 391
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++V A KS ++PLVVRLEGT V++G++IL ES +P+I L +AA +
Sbjct: 337 ATAVVEAYKSVGFNVPLVVRLEGTEVEQGRKILSESGIPIIIGDGLTDAAKKVV 390
>gi|117925044|ref|YP_865661.1| succinyl-CoA synthetase subunit beta [Magnetococcus marinus MC-1]
gi|117608800|gb|ABK44255.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Magnetococcus
marinus MC-1]
Length = 388
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 225/384 (58%), Gaps = 40/384 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+L+ + +V+KAQI AGGRG GV + +M+G L+T QT
Sbjct: 36 KELDSEVFVVKAQIHAGGRGKA-------GGVKVVKTTDAVREEASRMLGLTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ V + +I RE Y IV DR + + S GG +IE VA K+P +
Sbjct: 89 EGKEVKRLYVEEGCDIARELYLGIVIDRATSRVTFMASTEGGMEIEEVAEKSPEKILREV 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D G+ A+++A L +G K N
Sbjct: 149 VDPAVGLVAFQARNLAFGLGLEG-----------KQIN---------------------- 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
KA + L+N F+ DA+ +EINPLV T +VI++D K+NFD NA +RQK I +
Sbjct: 176 KAVQLMSGLYNAFMETDASLMEINPLVITGAGDVIALDCKMNFDANALYRQKAIEELRDF 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
E +P+E++ASK+ LNY+ +DGNIGC+VNGAGLAMATMDIIK+ GG PANFLDVGGG
Sbjct: 236 DEENPKEIEASKHELNYIALDGNIGCMVNGAGLAMATMDIIKIKGGAPANFLDVGGGATT 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + +AF++I SD NVK +LVN+FGGI+ C IA G+V A K L++PL+VRLEGTNV+
Sbjct: 296 ERVTEAFKLILSDENVKAVLVNIFGGIMRCDVIANGVVEAAKQVNLNVPLIVRLEGTNVE 355
Query: 401 EGKRILDESKLPLIFASDLDEAAS 424
+GK IL S LP+I A +LD+AA+
Sbjct: 356 KGKEILANSGLPIISADNLDDAAT 379
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K L++PL+VRLEGTNV++GK IL S LP+I A +LD+AA
Sbjct: 329 ANGVVEAAKQVNLNVPLIVRLEGTNVEKGKEILANSGLPIISADNLDDAA 378
>gi|307200145|gb|EFN80454.1| Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
[Harpegnathos saltator]
Length = 449
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 238/411 (57%), Gaps = 40/411 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
KD K+ V+KAQ+LAGGRG+G F SGV + + MIG L+TKQT
Sbjct: 60 KDFKTKDIVLKAQVLAGGRGMGRFRGTDISGVMMCETPEQAKKLANNMIGKVLVTKQTGA 119
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G N VM+ + +E Y ++ +R +GPV+I+S GG +IE +AA P + IP
Sbjct: 120 AGKICNSVMITTRMFPRKEYYLAMMLERTFDGPVLIVSKQGGVNIEEIAATNPEAISYIP 179
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID+ +G+T A + + L G +++IA +
Sbjct: 180 IDMRKGLTAEQADSVGNKLGLTGQ--------------------SKEIASIIACN----- 214
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
L+ LF+ DA LEINP VE + ++D K NFDD+A+FRQK +F+ +
Sbjct: 215 --------LYELFIEKDALLLEINPFVEDICGQYYALDCKCNFDDSADFRQKELFAFKDT 266
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
++ DP EV+A K+NLNY+ +DGNIGCLVNGAGLAMATMDIIK +GG PANFLDVGG
Sbjct: 267 TQMDPNEVEAEKHNLNYITLDGNIGCLVNGAGLAMATMDIIKFYGGMPANFLDVGGTATI 326
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E++ + F+I+S+ NV+ ILVN+FGGI+ C IA+G++NA K L P+VVRL+GTNV+
Sbjct: 327 ETVTEGFKILSAGENVEAILVNIFGGIMRCDIIAQGIINAFKQLDLKTPVVVRLQGTNVK 386
Query: 401 EGKRILDESKLPLIFASDLDEAAS-------LVNACKSFKLSIPLVVRLEG 444
E K ++ ++KL + D EAA ++N KS L + ++ + G
Sbjct: 387 EAKALIADAKLKVFSIDDFAEAAETSVKLALMMNLAKSLNLDMNIITKSSG 437
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA K L P+VVRL+GTNV+E K ++ ++KL + D EAA
Sbjct: 360 AQGIINAFKQLDLKTPVVVRLQGTNVKEAKALIADAKLKVFSIDDFAEAA 409
>gi|154686025|ref|YP_001421186.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
FZB42]
gi|375362253|ref|YP_005130292.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|384265192|ref|YP_005420899.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|385264735|ref|ZP_10042822.1| succinate-CoA ligase subunit beta [Bacillus sp. 5B6]
gi|387898188|ref|YP_006328484.1| succinyl-CoA synthetase beta chain [Bacillus amyloliquefaciens Y2]
gi|394993948|ref|ZP_10386687.1| succinyl-CoA synthetase subunit beta [Bacillus sp. 916]
gi|421731721|ref|ZP_16170844.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|429505161|ref|YP_007186345.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|451347020|ref|YP_007445651.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
IT-45]
gi|452855555|ref|YP_007497238.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|189046881|sp|A7Z4M9.1|SUCC_BACA2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|154351876|gb|ABS73955.1| SucC [Bacillus amyloliquefaciens FZB42]
gi|371568247|emb|CCF05097.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|380498545|emb|CCG49583.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|385149231|gb|EIF13168.1| succinate-CoA ligase subunit beta [Bacillus sp. 5B6]
gi|387172298|gb|AFJ61759.1| succinyl-CoA synthetase beta chain [Bacillus amyloliquefaciens Y2]
gi|393805272|gb|EJD66652.1| succinyl-CoA synthetase subunit beta [Bacillus sp. 916]
gi|407073934|gb|EKE46924.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|429486751|gb|AFZ90675.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|449850778|gb|AGF27770.1| succinyl-CoA synthetase subunit beta [Bacillus amyloliquefaciens
IT-45]
gi|452079815|emb|CCP21573.1| succinyl-CoA synthetase (beta subunit) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 385
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 229/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + L+ YV+KAQI AGGRG GV ++ E+++G
Sbjct: 28 AEEAVEKAESLSSSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKEYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL+ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILNESGLNITSAESMADGA 378
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL+ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILNESGLNITSAESMADGAQKIV 382
>gi|52080211|ref|YP_079002.1| succinyl-CoA synthetase subunit beta [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|319646010|ref|ZP_08000240.1| succinyl-CoA ligase subunit beta [Bacillus sp. BT1B_CT2]
gi|404489099|ref|YP_006713205.1| succinyl-CoA synthetase subunit beta [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|423682152|ref|ZP_17656991.1| succinyl-CoA synthetase subunit beta [Bacillus licheniformis WX-02]
gi|81385581|sp|Q65JP0.1|SUCC_BACLD RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|52003422|gb|AAU23364.1| succinyl-CoA synthetase (beta subunit) [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|52348090|gb|AAU40724.1| succinyl-CoA ligase beta subunit SucC [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|317391760|gb|EFV72557.1| succinyl-CoA ligase subunit beta [Bacillus sp. BT1B_CT2]
gi|383438926|gb|EID46701.1| succinyl-CoA synthetase subunit beta [Bacillus licheniformis WX-02]
Length = 386
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 224/376 (59%), Gaps = 40/376 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YV+KAQI AGGRG GV + +++ E+++G L+T QT G + +
Sbjct: 43 YVVKAQIHAGGRGKA-------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+++ + +I +E Y +V DR + V++ S GGT+IE VA KTP + ID G+
Sbjct: 96 LLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGL 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
S A+KIA + +L +A +
Sbjct: 156 Q---------------------------------SYQARKIAFAINIPKELVGQAVKFMM 182
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ F D + EINPLV T + +V+++DAK+NFD NA +RQK+I ++ E DP+E
Sbjct: 183 GLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILEYRDLDEEDPKE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFLDVGGG E + +AF
Sbjct: 243 IEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVGGGATAEKVTEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV GK+ILD
Sbjct: 303 KIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLEGTNVDLGKKILD 362
Query: 408 ESKLPLIFASDLDEAA 423
+S L + A + + A
Sbjct: 363 DSGLNITSAESMADGA 378
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV GK+ILD+S L + A + + A +
Sbjct: 329 AEGVVEATKQVGLTLPLVVRLEGTNVDLGKKILDDSGLNITSAESMADGAQKIV 382
>gi|58698202|ref|ZP_00373123.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630876|ref|YP_002727667.1| Succinyl-CoA synthetase, beta subunit [Wolbachia sp. wRi]
gi|254778456|sp|C0R4N4.1|SUCC_WOLWR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|58535283|gb|EAL59361.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592857|gb|ACN95876.1| Succinyl-CoA synthetase, beta subunit [Wolbachia sp. wRi]
Length = 383
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 231/393 (58%), Gaps = 46/393 (11%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ +T + LK F V+KAQI AGGRG GV + ++ ++ MIG
Sbjct: 29 EEVKTQVSQLKSDVF---VVKAQIHAGGRGKA-------GGVKLAKSAEEAQQFVKDMIG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT +G V KV V + +I +E Y +V D + P+ I S GG DIE VA
Sbjct: 79 MTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAK 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P K + D+ + ++ + F + +++K+ N+
Sbjct: 139 NSP--AKIVKFDIDSATSFDSSKLSSSF--------HLSPEQIEKITNV----------- 177
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+ +++ F++ DA+Q+EINPLVET + I++DAKINFDDNA +R
Sbjct: 178 ---------------AKNIYDAFIATDASQIEINPLVETSSGDFIALDAKINFDDNALYR 222
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
I + E E++ASKY L+Y+ MDG+IGC+VNGAGLAMATMDIIK +G EPAN
Sbjct: 223 HPEIMELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPAN 282
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++E++ +AF+II SDSNVK ILVN+FGGI+ C IA G+V A K + +PL
Sbjct: 283 FLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPL 342
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRL GTN +EGK+IL+ES L +I A +L +AA
Sbjct: 343 VVRLSGTNFEEGKKILEESGLNIIAADELGDAA 375
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN +EGK+IL+ES L +I A +L +AA +
Sbjct: 326 ASGIVAAAKEMSIKVPLVVRLSGTNFEEGKKILEESGLNIIAADELGDAAQKIV 379
>gi|254463090|ref|ZP_05076506.1| succinyl-CoA synthase, beta subunit [Rhodobacterales bacterium
HTCC2083]
gi|206679679|gb|EDZ44166.1| succinyl-CoA synthase, beta subunit [Rhodobacteraceae bacterium
HTCC2083]
Length = 398
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/419 (41%), Positives = 238/419 (56%), Gaps = 43/419 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHF 74
PVS + K EDA+TA +++ +V+KAQI AGGRG G F D G K GV
Sbjct: 18 PVSDGRAVLKA--EDAKTAAG---EMDGPLWVVKAQIHAGGRGKGTFKEADAGEKGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
+ + +KM+G L+T QT G VN++ + +I E Y ++ DR +
Sbjct: 73 AFSASEAADEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSDIEAELYLALLVDRQTSRIS 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
+ S GG DIE VAA TP + + +D G + F G
Sbjct: 133 FVCSTEGGMDIEEVAAATPEKIISFSVDPATG-----------YQAFHG----------- 170
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
++IA L +G + + +L+ F+ D QLEINPL+ +
Sbjct: 171 -----------RRIAFELGLKGAQVKQCVKLMGQLYQAFVEKDMEQLEINPLIVLEGSGD 219
Query: 255 ISV-DAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGL 313
+ V DAK+ FD NA +R +I + + +E D +E++ASKY+LNY+ +DG IGC+VNGAGL
Sbjct: 220 LKVLDAKVGFDGNALYRHADIMALRDETEEDSKELEASKYDLNYIALDGEIGCMVNGAGL 279
Query: 314 AMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATI 373
AMATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C I
Sbjct: 280 AMATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVI 339
Query: 374 AKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
A+G+V A K L +PLVVRLEGTNV+EGK I++ S + +I A DL D A +V A K
Sbjct: 340 AEGVVAAVKEVGLQVPLVVRLEGTNVEEGKAIINNSDVDVIAADDLKDGAQKIVKAVKG 398
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+EGK I++ S + +I A DL + A + A
Sbjct: 340 AEGVVAAVKEVGLQVPLVVRLEGTNVEEGKAIINNSDVDVIAADDLKDGAQKIVKA 395
>gi|91975016|ref|YP_567675.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
BisB5]
gi|123749427|sp|Q13DR5.1|SUCC_RHOPS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|91681472|gb|ABE37774.1| succinyl-CoA synthetase (ADP-forming) beta subunit
[Rhodopseudomonas palustris BisB5]
Length = 399
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 233/387 (60%), Gaps = 37/387 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV ++ ++ ++M+ L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKDYAQQMLHATLVTVQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V + I +E Y ++ DR + ++S GG IE+VA TP + + +D
Sbjct: 103 VNRLYVEEGSEIDKEFYLSLLVDRATSRISFVVSTEGGMSIEDVAHDTPEKIVSFTVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI ++ + +A+ L +G+ +A +
Sbjct: 163 TGI---------------------------------MAHHGRAVANTLGLKGEQAKQAES 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V KL+ FL+ D LEINPLV T + ++ +DAK++FD NA +R +I + + +E D
Sbjct: 190 LVTKLYTAFLAKDMEMLEINPLVLTKQGDLKCLDAKMSFDGNALYRHADIQALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMTPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK IL+N+FGGI+ C IA+G+V A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKEVGLDVPLVVRLEGTNVEAGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACK 430
I+ S L ++ A +LD+AA +VNA K
Sbjct: 370 IIKHSGLNVLPADNLDDAAQKIVNAVK 396
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV+ GK+I+ S L ++ A +LD+AA +
Sbjct: 339 AEGVVAAVKEVGLDVPLVVRLEGTNVEAGKKIIKHSGLNVLPADNLDDAAQKIV 392
>gi|218529901|ref|YP_002420717.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
CM4]
gi|240138205|ref|YP_002962677.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
AM1]
gi|254560765|ref|YP_003067860.1| succinyl-CoA synthetase subunit beta [Methylobacterium extorquens
DM4]
gi|418059756|ref|ZP_12697695.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Methylobacterium
extorquens DSM 13060]
gi|218522204|gb|ACK82789.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
CM4]
gi|240008174|gb|ACS39400.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
AM1]
gi|254268043|emb|CAX23914.1| succinyl-CoA synthetase, beta subunit [Methylobacterium extorquens
DM4]
gi|373566698|gb|EHP92688.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Methylobacterium
extorquens DSM 13060]
Length = 398
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 222/385 (57%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV T + ++ +M+G L+T QT + G
Sbjct: 43 WVVKSQIHAGGRGKGTFKGAPEGAKGGVRVTKSKDEVVQFAREMLGQTLVTVQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + I E Y ++ DR ++S GG DIE VA TP + T +D
Sbjct: 103 VNRLYIEEGAAIAAEFYLSMLVDRETGRVAFVVSTEGGMDIEQVAHDTPEKIVTFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + + +A L G +A
Sbjct: 163 TGI---------------------------------MPHHGRAVAKALGLSGPQAKEAGA 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+KL+ F + D + LEINPLV T + + +DAKI+FD NA +R I + + +E D
Sbjct: 190 LTEKLYAAFTAKDMSMLEINPLVLTGDGGLKCLDAKISFDSNALYRHPEIVALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G EPANFLDVGGG +EE +
Sbjct: 250 AKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGEEPANFLDVGGGASEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK
Sbjct: 310 AAFKIITADPQVKGILVNIFGGIMKCDVIARGVIAAVKAVGLEVPLVVRLEGTNVEEGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ S L +I A DLD+AA + A
Sbjct: 370 IIRNSGLNVIPADDLDDAAQKIVAA 394
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K+ L +PLVVRLEGTNV+EGK I+ S L +I A DLD+AA + A
Sbjct: 339 ARGVIAAVKAVGLEVPLVVRLEGTNVEEGKEIIRNSGLNVIPADDLDDAAQKIVAA 394
>gi|115522327|ref|YP_779238.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
BisA53]
gi|122297981|sp|Q07UX6.1|SUCC_RHOP5 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|115516274|gb|ABJ04258.1| succinyl-CoA synthetase (ADP-forming) beta subunit
[Rhodopseudomonas palustris BisA53]
Length = 399
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 232/387 (59%), Gaps = 37/387 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G + GV ++ ++ ++M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGSQGGVRLAKSIDEVKQFAQEMLGATLVTLQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + I +E Y ++ DR + ++S GG +IE+VA TP + + +D
Sbjct: 103 VNRLYIEEGSAIDKEFYLSLLVDRATSRVSFVVSTEGGMNIEDVAHDTPEKIISFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + G + AK L G+L +A
Sbjct: 163 TGI-----------MPHHGRIVAKT----------------------LGLTGELAKQAGK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+L+ F++ D LEINPLV T + E+ +DAK++FD N+ +RQ ++ + + +E D
Sbjct: 190 LTTQLYTAFVAKDMEMLEINPLVLTKDGELRCLDAKMSFDSNSLYRQPDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK+ L Y+ ++G IGC+VNGAGLAMAT+DIIKL+G PANFLDVGGG EE +
Sbjct: 250 AKEIEASKHELAYIALEGTIGCMVNGAGLAMATLDIIKLYGESPANFLDVGGGATEEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K+ L +PLVVRLEGTNV+EGK
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIARGVIAAVKTVGLEVPLVVRLEGTNVEEGKA 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACK 430
I+ +S L ++ A DLD+AA +VNA K
Sbjct: 370 IIRDSGLNVLSADDLDDAAQKIVNAVK 396
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K+ L +PLVVRLEGTNV+EGK I+ +S L ++ A DLD+AA +
Sbjct: 339 ARGVIAAVKTVGLEVPLVVRLEGTNVEEGKAIIRDSGLNVLSADDLDDAAQKIV 392
>gi|39933268|ref|NP_945544.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
CGA009]
gi|192288619|ref|YP_001989224.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
TIE-1]
gi|81564418|sp|Q6NDB7.1|SUCC_RHOPA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|226734980|sp|B3Q760.1|SUCC_RHOPT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|39652893|emb|CAE25635.1| succinyl-coA synthetase beta chain [Rhodopseudomonas palustris
CGA009]
gi|192282368|gb|ACE98748.1| succinyl-CoA synthetase, beta subunit [Rhodopseudomonas palustris
TIE-1]
Length = 398
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 230/385 (59%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV ++ ++ ++M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKEFAKQMLGATLVTVQTGADGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I +E Y ++ DR + ++S GG IE+VA +TP + + +D
Sbjct: 103 VNRLYIEEGSDIDKEFYLSLLVDRATSRISFVVSTEGGMSIEDVAHETPEKIVSFTVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + + +A L +G+ +A
Sbjct: 163 TGI---------------------------------MGHHGRTVAKALNLKGEQAKQAEA 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V KL+ F++ D LEINPLV T + ++ +DAKI+FD NA +R +I + + +E D
Sbjct: 190 MVAKLYTAFVAKDMDMLEINPLVLTKQGDLKCLDAKISFDGNALYRHTDIQALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMSPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK IL+N+FGGI+ C IA+G+V A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLDVPLVVRLEGTNVEAGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ S L ++ A +LD+AA + A
Sbjct: 370 IIKHSGLNVLPADNLDDAAQKIVAA 394
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK+I+ S L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLDVPLVVRLEGTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVAA 394
>gi|389573269|ref|ZP_10163344.1| succinyl-CoA synthetase subunit beta [Bacillus sp. M 2-6]
gi|388426966|gb|EIL84776.1| succinyl-CoA synthetase subunit beta [Bacillus sp. M 2-6]
Length = 386
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 232/383 (60%), Gaps = 40/383 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
++L YV+KAQI AGGRG GV ++ E+++G L+T QT
Sbjct: 36 EELGSSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP + +
Sbjct: 89 EGREIKRLLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVV 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID G+ A+++A F+ ++ K + K F++SL
Sbjct: 149 IDPAIGLQAYQAREVA----FKINIPTKLVGQAVK----FMTSL---------------- 184
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+N F+ D + EINPLV T + +V+++DAK+NFD NA +RQK+I ++
Sbjct: 185 ---------YNAFIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILEYRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GG+PANFLDVGGG
Sbjct: 236 DEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVGGGATA 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV+
Sbjct: 296 EKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLEGTNVE 355
Query: 401 EGKRILDESKLPLIFASDLDEAA 423
GK+IL +S L + A + + A
Sbjct: 356 LGKKILSDSGLNITSAESMADGA 378
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL +S L + A + + A +
Sbjct: 329 AEGVVEATKQVGLTLPLVVRLEGTNVELGKKILSDSGLNITSAESMADGAEKIV 382
>gi|402848300|ref|ZP_10896564.1| Succinyl-CoA ligase [ADP-forming] beta chain [Rhodovulum sp. PH10]
gi|402501454|gb|EJW13102.1| Succinyl-CoA ligase [ADP-forming] beta chain [Rhodovulum sp. PH10]
Length = 389
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 227/375 (60%), Gaps = 40/375 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV +V+ + ++++G L+T QT G V+++
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKVVKSVEAVETEAKRLLGSTLVTHQTGPRGKEVHRL 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
V + I +E Y + DR ++S GG DIE+VAA+TP + ++ +D GI
Sbjct: 97 YVEEGSAIEKEFYLSALVDRATGRISFVVSTEGGMDIEHVAAETPEKIVSLSVDPATGI- 155
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ +++A L GDL +A V K
Sbjct: 156 --------------------------------MPHHGRRVAQALGLSGDLAKQAGALVTK 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+ F++ D T LEINPLV T + ++I +DAKI F+ NA +R ++ + +++E D +E+
Sbjct: 184 LYGAFVAKDMTMLEINPLVVTKDGKLICLDAKIAFEGNALYRHPDVVALRDLTEEDEKEI 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASK+ L+YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E + +AF+
Sbjct: 244 EASKHELSYVALDGNIGCMVNGAGLAMATMDIIKLYGEEPANFLDVGGGASKERVTEAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II++D VK IL+N+FGGI+ C +A+G++ A K LS+PLVVRLEGTNV +GK I+
Sbjct: 304 IITADPKVKGILINIFGGIMKCDVLAEGVIAAVKEVGLSVPLVVRLEGTNVDQGKAIIAG 363
Query: 409 SKLPLIFASDLDEAA 423
S L ++ A DLD+AA
Sbjct: 364 SGLDVVSADDLDDAA 378
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K LS+PLVVRLEGTNV +GK I+ S L ++ A DLD+AA + A
Sbjct: 329 AEGVIAAVKEVGLSVPLVVRLEGTNVDQGKAIIAGSGLDVVSADDLDDAAQKIVKA 384
>gi|114571358|ref|YP_758038.1| succinyl-CoA synthetase subunit beta [Maricaulis maris MCS10]
gi|122315054|sp|Q0AKU3.1|SUCC_MARMM RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|114341820|gb|ABI67100.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Maricaulis
maris MCS10]
Length = 399
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 223/370 (60%), Gaps = 36/370 (9%)
Query: 48 YVIKAQILAGGRGLGHFD---NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F + K GV + +D+ ++M+G+ L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKELGSDAKGGVRLAFSKEDVVKNAKEMLGNTLVTHQTGPEGKR 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I E Y ++ +R ++S GG DIE VAA+TP ++TI ID
Sbjct: 103 VNRLYIEDGADIATELYCSLLVNRETGQVAFVVSTEGGMDIEEVAAETPEKIQTIDIDPS 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T++ A + D L+ +G + R D+ A
Sbjct: 163 TGVTDASAAAVCDALKLEG-----------------------------QAREDMMGLA-- 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ L+ F D + LEINPL+ D V +DAK++FD NA FR +I + +E D
Sbjct: 192 --KILYTAFCEKDMSMLEINPLIVMDNGHVRVLDAKVSFDGNALFRHPDIMELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG E +
Sbjct: 250 EKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV +GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVTAVKDVGLQVPLVVRLEGTNVAKGKQ 369
Query: 405 ILDESKLPLI 414
I++ES L +I
Sbjct: 370 IINESGLNVI 379
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGTNV +GK+I++ES L +I
Sbjct: 339 AEGVVTAVKDVGLQVPLVVRLEGTNVAKGKQIINESGLNVI 379
>gi|304321621|ref|YP_003855264.1| SucC, succinyl-CoA synthetase subunit beta [Parvularcula
bermudensis HTCC2503]
gi|303300523|gb|ADM10122.1| SucC, succinyl-CoA synthetase, beta subunit [Parvularcula
bermudensis HTCC2503]
Length = 396
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 217/370 (58%), Gaps = 37/370 (10%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG GHF + G K GV V D ++ M+GH L+TKQT G
Sbjct: 43 YVVKAQIHAGGRGKGHFKEAEAGEKGGVRLAKTVDDAAAQVKAMLGHTLVTKQTGDEGKV 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V +V + +I RE Y ++ DR I S GG DIE VAA TP + T+PID
Sbjct: 103 VGRVYIEDGADIDRELYLSLLVDRGTGKVAFIASTEGGMDIEEVAASTPEKILTLPID-P 161
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T A+D A K+ + L+ G +
Sbjct: 162 AGMT---AED------------------------------AIKLVEALKLEGAAREDGLK 188
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ L+ F+ D + LEINPL+ + + +DAK+ FD NA FR +I + SE D
Sbjct: 189 LMPILYTAFVEKDMSMLEINPLIVMTDGHLRVLDAKVGFDPNASFRHPDIEQLRDESEED 248
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E AS+++L+Y+ +DGNIGC+VNGAGLAMATMDI+K +G EPANFLDVGGG +E +
Sbjct: 249 PLERRASEFDLSYIKLDGNIGCMVNGAGLAMATMDIVKHYGAEPANFLDVGGGATKEKVT 308
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
+AF+II+SD V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV GK+
Sbjct: 309 EAFKIITSDPGVEGILVNIFGGIMKCDVIAEGVIAAVKETGLKVPLVVRLEGTNVDAGKK 368
Query: 405 ILDESKLPLI 414
I++ES L +I
Sbjct: 369 IINESGLDVI 378
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A ++ A K L +PLVVRLEGTNV GK+I++ES L +I
Sbjct: 338 AEGVIAAVKETGLKVPLVVRLEGTNVDAGKKIINESGLDVI 378
>gi|452974488|gb|EME74308.1| succinyl-CoA synthetase subunit beta [Bacillus sonorensis L12]
Length = 386
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 164/392 (41%), Positives = 233/392 (59%), Gaps = 42/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + L+ YV+KAQI AGGRG GV + ++ ++++G
Sbjct: 28 ADEAVKAAESLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSKDEVKAYADELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQEIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PH-LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
P +VKT+ ID G+ S A+KIA
Sbjct: 141 PEKIVKTV-IDPAVGLQ---------------------------------SYQARKIAFA 166
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
+ +L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +RQ
Sbjct: 167 INIPKELVGQAVKFMMGLYRAFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQ 226
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANF
Sbjct: 227 KDILEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANF 286
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K L++PLV
Sbjct: 287 LDVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLV 346
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VRLEGTNV GK+ILD+S L + A + + A
Sbjct: 347 VRLEGTNVDLGKKILDDSGLNITSAESMADGA 378
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV GK+ILD+S L + A + + A +
Sbjct: 329 AEGVVEATKQVGLTLPLVVRLEGTNVDLGKKILDDSGLNITSAESMADGAQKIV 382
>gi|316931839|ref|YP_004106821.1| succinyl-CoA synthetase subunit beta [Rhodopseudomonas palustris
DX-1]
gi|315599553|gb|ADU42088.1| succinyl-CoA synthetase, beta subunit [Rhodopseudomonas palustris
DX-1]
Length = 398
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 230/385 (59%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV ++ ++ ++M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKDYAKQMLGATLVTVQTGADGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I +E Y ++ DR + ++S GG IE+VA +TP + + +D
Sbjct: 103 VNRLYIEEGSDIDKEFYLSLLVDRATSRISFVVSTEGGMSIEDVAHETPEKIVSFTVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
GI + + +A L +GD +A
Sbjct: 163 TGI---------------------------------MGHHGRTVAKALNLKGDQAKQAEA 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
V KL+ F++ D LEINPLV T + ++ +DAKI+FD NA +R +I + + +E D
Sbjct: 190 MVAKLYAAFVAKDMDMLEINPLVLTKQGDLKCLDAKISFDGNALYRHIDIQALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++E +
Sbjct: 250 AKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK IL+N+FGGI+ C IA+G+V A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPNVKGILINIFGGIMKCDVIAEGVVAAVKEVGLDVPLVVRLEGTNVEAGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ S L ++ A +LD+AA + A
Sbjct: 370 IIKHSGLNVLPADNLDDAAQKIVAA 394
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK+I+ S L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLDVPLVVRLEGTNVEAGKKIIKHSGLNVLPADNLDDAAQKIVAA 394
>gi|189499636|ref|YP_001959106.1| succinyl-CoA synthetase subunit beta [Chlorobium phaeobacteroides
BS1]
gi|226734935|sp|B3EN95.1|SUCC_CHLPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|189495077|gb|ACE03625.1| succinyl-CoA synthetase, beta subunit [Chlorobium phaeobacteroides
BS1]
Length = 391
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 225/379 (59%), Gaps = 40/379 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV + ++ I +++G L+T QT G V ++
Sbjct: 48 VVKAQIHAGGRGKA-------GGVKLAQSPEEAYEIAGQILGATLVTHQTGPEGKEVRRL 100
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+V + +NI +E Y I DR + V+++S GG +IE VA +TP + I ID G+
Sbjct: 101 LVEEGMNIEKEFYVGITLDRATSNNVLMVSTEGGMEIEKVAEETPDKILKIQIDPLHGL- 159
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
L FQ A++ A FLE G+ +
Sbjct: 160 ----------LGFQ----------------------ARQAAFFLELDGERFKNGVKFITA 187
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+N ++S+DA+ EINPLV T E V+++DAKINFD NA +R K+ + E DP EV
Sbjct: 188 LYNAYVSIDASLAEINPLVVTAEGRVLALDAKINFDSNALYRHKDFLELRDTGEEDPFEV 247
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG+PANFLDVGG + E++ + F+
Sbjct: 248 EASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPANFLDVGGTASPETVTEGFK 307
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NVK ILVN+FGGIV C +A G++ A K L++P++VRLEGTN + + +LDE
Sbjct: 308 IIMSDKNVKAILVNIFGGIVRCDRVAAGVIEAAKKVGLNLPVIVRLEGTNAEAAQTMLDE 367
Query: 409 SKLPLIFASDLDEAASLVN 427
S L LI A+ L +AA +N
Sbjct: 368 SGLNLISANGLRDAAEKIN 386
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA ++ A K L++P++VRLEGTN + + +LDES L LI A+ L +AA
Sbjct: 333 AAGVIEAAKKVGLNLPVIVRLEGTNAEAAQTMLDESGLNLISANGLRDAA 382
>gi|157692288|ref|YP_001486750.1| succinyl-CoA synthetase subunit beta [Bacillus pumilus SAFR-032]
gi|189046884|sp|A8FD73.1|SUCC_BACP2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|157681046|gb|ABV62190.1| succinate--CoA ligase (ADP-forming) beta subunit [Bacillus pumilus
SAFR-032]
Length = 386
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 229/376 (60%), Gaps = 40/376 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YV+KAQI AGGRG GV ++ E+++G L+T QT G + +
Sbjct: 43 YVVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+++ + +I +E Y +V DR + V++ S GGT+IE VA KTP + + ID G+
Sbjct: 96 LLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGL 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
A+++A F+ ++ K + K F++SL
Sbjct: 156 QGYQAREVA----FKINIPTKLVGQAVK----FMTSL----------------------- 184
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
+N F+ D + EINPLV T + +V+++DAK+NFD NA +RQK+I ++ E DP+E
Sbjct: 185 --YNAFIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILEYRDLDEEDPKE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GG+PANFLDVGGG E + +AF
Sbjct: 243 IEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVGGGATAEKVTEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV+ GK+IL
Sbjct: 303 KIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLEGTNVELGKKILS 362
Query: 408 ESKLPLIFASDLDEAA 423
+S L + A + + A
Sbjct: 363 DSGLNITSAESMADGA 378
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL +S L + A + + A +
Sbjct: 329 AEGVVEATKQVGLTLPLVVRLEGTNVELGKKILSDSGLNITSAESMADGAEKIV 382
>gi|406661481|ref|ZP_11069599.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Cecembia lonarensis
LW9]
gi|405554630|gb|EKB49706.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Cecembia lonarensis
LW9]
Length = 403
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 168/388 (43%), Positives = 229/388 (59%), Gaps = 39/388 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YVIKAQI AGGRG G +GV ++D+ + ++G L+T QT G VNK
Sbjct: 47 YVIKAQIHAGGRGKGKVKETDSNGVVLAKKLEDVSEKAKNILGGTLVTIQTGAEGKKVNK 106
Query: 108 VMVAKSVNIT-----RETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
++VA+ V +E Y I+ DR V++ S GG DIE VA K P + +D
Sbjct: 107 ILVAEDVYYPGASEPKEYYLSILLDRAKGCNVIMASTEGGMDIEEVAEKHPEKIIKEWVD 166
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
G+ A+ +A F+ L+ A E+ K F++SL
Sbjct: 167 PKVGLQGFQARKVA----FKLGLEGNAFKEMVK----FITSL------------------ 200
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
++ ++ DA+Q EINP+++T + ++++VDAK+N DDN+ FR KN+ +++E
Sbjct: 201 -------YSAYIGSDASQFEINPVLKTSDDKILAVDAKVNLDDNSLFRHKNLAELRDLAE 253
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP EV+A K LNYV +DGN+GC+VNGAGLAMATMD+IKL GGEPANFLDVGGG N +
Sbjct: 254 EDPLEVEAGKSGLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGGEPANFLDVGGGANATT 313
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQE 401
+ FRII D NVK IL+NVFGGIV C IA G+V A KS + +P++VRL+GTN +E
Sbjct: 314 VEAGFRIILQDPNVKAILINVFGGIVRCDRIANGVVEAYKSIGDIPVPIIVRLQGTNAEE 373
Query: 402 GKRILDESKLPLIFASDLDEAASLVNAC 429
G RI+DES L + A L EAA V A
Sbjct: 374 GARIIDESGLKVSSAITLKEAAQKVRAA 401
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A KS + +P++VRL+GTN +EG RI+DES L + A L EAA
Sbjct: 345 ANGVVEAYKSIGDIPVPIIVRLQGTNAEEGARIIDESGLKVSSAITLKEAA 395
>gi|186473506|ref|YP_001860848.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
STM815]
gi|184195838|gb|ACC73802.1| succinyl-CoA synthetase, beta subunit [Burkholderia phymatum
STM815]
Length = 407
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 234/398 (58%), Gaps = 35/398 (8%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGH 91
R A + L +V+K+QI AGGRG G F D K GV +V D+ E+M+ H
Sbjct: 29 REAEDAALALGGAVWVVKSQIHAGGRGAGRFADDPNGKGGVRVVKSVSDVGSSAEQMLAH 88
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
L+TKQT G V +V V + I RE Y ++ DR + V+ S GG +IE VAA
Sbjct: 89 VLVTKQTGPAGREVKRVYVEEGCAIERELYLGMLIDRSTSRITVMASTEGGMEIEEVAAH 148
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
TP + + ID G+ A+ +A L G + K+AT+
Sbjct: 149 TPEKILKVAIDPATGLQPFHARQLAFGLGLTGK-QVKSATQF------------------ 189
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
+ + F+ +DA+ +EINPLV T + +VI++DAKINFDDNA FR
Sbjct: 190 --------------IANAYRAFVELDASIVEINPLVVTQQGDVIALDAKINFDDNALFRH 235
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
I + + +E D E++A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANF
Sbjct: 236 PAIEALRDEAEEDAAELEAAKHGLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGGEPANF 295
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGGG E + AFR+I D V+ ILVN+FGGI+ C IA G+V+A + L +PLV
Sbjct: 296 LDVGGGATRERVATAFRLILRDPKVEGILVNIFGGIMRCDVIADGVVSAAREVDLRVPLV 355
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
VRLEGTNV+ GK+IL +S LP++ A L +AAS V A
Sbjct: 356 VRLEGTNVELGKQILRDSGLPILSADHLADAASKVVAA 393
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A + L +PLVVRLEGTNV+ GK+IL +S LP++ A L +AA+ + A
Sbjct: 338 ADGVVSAAREVDLRVPLVVRLEGTNVELGKQILRDSGLPILSADHLADAASKVVAA 393
>gi|410030136|ref|ZP_11279966.1| succinyl-CoA synthetase subunit beta [Marinilabilia sp. AK2]
Length = 403
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 229/388 (59%), Gaps = 39/388 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+VIKAQI AGGRG G +GV ++D+ + ++G L+T QT G VNK
Sbjct: 47 FVIKAQIHAGGRGKGKIKETDSNGVVLAKKLEDVSEKAKNILGGTLVTIQTGAEGKKVNK 106
Query: 108 VMVAKSVNIT-----RETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
++VA+ V +E Y I+ DR V++ S GG DIE VA K P + +D
Sbjct: 107 ILVAEDVYYPGASELKEYYLSILLDRAKGCNVIMASTEGGMDIEEVAEKHPEKIIKEWVD 166
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
G+ A+ +A F+ L+ A E+ K F++S
Sbjct: 167 PKLGLQGFQARKVA----FKLGLEGNAFKEMVK----FITS------------------- 199
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
L+N ++ DA+Q EINP+++T + ++++VDAK+N DDNA +R K++ +++E
Sbjct: 200 ------LYNAYIGSDASQFEINPVLKTSDDKILAVDAKVNLDDNALYRHKDLADLRDLAE 253
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP EV+A K LNYV +DGN+GC+VNGAGLAMATMD+IKL GGEPANFLDVGGG N +
Sbjct: 254 EDPLEVEAGKSGLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGGEPANFLDVGGGANATT 313
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQE 401
+ FRII D NVK IL+NVFGGIV C IA G+V A KS + +P++VRL+GTN +E
Sbjct: 314 VEAGFRIILQDPNVKAILINVFGGIVRCDRIASGVVEAYKSIGDIPVPIIVRLQGTNAEE 373
Query: 402 GKRILDESKLPLIFASDLDEAASLVNAC 429
G RI+DES L + A L EAA V A
Sbjct: 374 GARIIDESGLKVSSAITLKEAAEKVRAA 401
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +V A KS + +P++VRL+GTN +EG RI+DES L + A L EAA
Sbjct: 345 ASGVVEAYKSIGDIPVPIIVRLQGTNAEEGARIIDESGLKVSSAITLKEAA 395
>gi|431798252|ref|YP_007225156.1| succinyl-CoA synthetase subunit beta [Echinicola vietnamensis DSM
17526]
gi|430789017|gb|AGA79146.1| succinyl-CoA synthetase, beta subunit [Echinicola vietnamensis DSM
17526]
Length = 405
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/385 (43%), Positives = 229/385 (59%), Gaps = 39/385 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YVIKAQI AGGRG G +GV + ++P + ++G L+T QT G NV+K
Sbjct: 47 YVIKAQIHAGGRGKGKIQQTDSNGVVLAKKLDEVPEKAKNILGGTLVTHQTGPEGKNVSK 106
Query: 108 VMVAKSVNI-----TRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
V+VA+ V +E Y I+ DR V++ S GG DIE VA KTP + ID
Sbjct: 107 VLVAQDVYYPGDSEPKEYYLSILLDRAKGCNVIMASTEGGMDIEEVAEKTPEKIIKEWID 166
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
G+ A+ +A L G+ A E+ K F+S+
Sbjct: 167 PKVGLQGFQARKVAFALGLSGN----ALKEMVK----FISA------------------- 199
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
L+ + + D++Q EINP+++T + ++++VDAK+N DDNA +R +++ ++SE
Sbjct: 200 ------LYKAYDATDSSQFEINPVLKTSDDQILAVDAKVNLDDNALYRHRDLAELRDLSE 253
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP EV+A K +LNYV +DGN+GC+VNGAGLAMATMD+IKL GGEPANFLDVGGG N +
Sbjct: 254 EDPLEVEAGKSDLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGGEPANFLDVGGGANATT 313
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQE 401
+ FRII D NVK IL+NVFGGIV C IA G+V A KS + +P++VRL+GTN +E
Sbjct: 314 VEAGFRIILKDPNVKAILINVFGGIVRCDRIASGVVEAYKSIGDIRVPIIVRLQGTNAEE 373
Query: 402 GKRILDESKLPLIFASDLDEAASLV 426
G +I+DES L + A L EAA V
Sbjct: 374 GAKIIDESGLKVSSAITLKEAAEKV 398
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +V A KS + +P++VRL+GTN +EG +I+DES L + A L EAA
Sbjct: 345 ASGVVEAYKSIGDIRVPIIVRLQGTNAEEGAKIIDESGLKVSSAITLKEAA 395
>gi|73662830|ref|YP_301611.1| succinyl-CoA synthetase subunit beta [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|82582273|sp|Q49X32.1|SUCC_STAS1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|72495345|dbj|BAE18666.1| succinyl-CoA synthetase beta subunit [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 388
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 231/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ K YV+KAQI AGGRG GV ++ ++ ++++G
Sbjct: 28 AEEAVEKAKELDSKVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEIKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVVGLAPYQARRIAFNINIPKESINKAAK--------FLVSL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T E EV+++DAK+NFDDNA F+ K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTGEGEVLALDAKVNFDDNALFKHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDENVKGIFVNIFGGIMKCDIIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL ES L + A+ + E A +
Sbjct: 348 RLEGTNVERGKEILKESGLAIEPAATMAEGAQKI 381
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILKESGLAIEPAATMAEGAQKIV 382
>gi|443925880|gb|ELU44639.1| succinate-CoA ligase [Rhizoctonia solani AG-1 IA]
Length = 443
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 248/448 (55%), Gaps = 64/448 (14%)
Query: 4 AFNQQIANFS---YLVKPVSTVHSTDKVCLEDART---ATNILKDLNFKEYVIKAQILAG 57
AF Q+ N S Y + + + A+T A ++ K+ VIKAQ+LAG
Sbjct: 17 AFAGQVRNLSIHEYQSMELLNAYGIPTPASKAAKTPQEAYDVAKNFGKDGLVIKAQVLAG 76
Query: 58 GRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNIT 117
GRG G FD G + GVH ++ + + KMIG KLITKQT G N VM+A+ + T
Sbjct: 77 GRGKGRFDTGLQGGVHKVSSPDEAKDLASKMIGSKLITKQTGAAGRICNAVMLAERRDPT 136
Query: 118 RETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIAD 177
E Y ++ DR PV++ S GG +IE VAAK P + T P+D G+++ A ++A
Sbjct: 137 HEYYVAVLNDRNTGSPVIVASAQGGMNIEEVAAKDPSAIITTPVDYKNGLSKDSALELAG 196
Query: 178 FLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVD 237
L +G +A+ A E+ F++ L +F D
Sbjct: 197 KLGLKGQ-QAEGAAEI------FVN--------------------------LTKIFREKD 223
Query: 238 ATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNY 297
ATQ+EINP+ T + V+ +DAK FDDNA+FRQK++F+ +VS+ DP EV+A+KYNLN+
Sbjct: 224 ATQIEINPMATTADGAVLCMDAKFGFDDNADFRQKDVFALRDVSQEDPTEVEAAKYNLNF 283
Query: 298 VGMDGNIGCLVNGAGLAMATMDIIKLHGG--EPANFLDVGGGVNEESIIQAFRIISSDSN 355
+ +DGN+GCLVNGAGLAMATMD++KLHGG PA +++ +AF ++ SD
Sbjct: 284 IKLDGNVGCLVNGAGLAMATMDVLKLHGGLFNPARI----DRATPDTVKKAFELLLSDKK 339
Query: 356 VKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK------------ 403
V I +N+FGGI+ C IA+G++ A K +L++PLVVRL+GT +E K
Sbjct: 340 VTSIFLNIFGGIMRCDYIAEGVIKATKELQLTVPLVVRLQGTKEKEAKQCVSQPFDQVEQ 399
Query: 404 -------RILDESKLPLIFASDLDEAAS 424
R++ +S L + LDEAA+
Sbjct: 400 ILTRSWNRLIKDSGLKIYAFDGLDEAAA 427
>gi|338741338|ref|YP_004678300.1| succinyl-CoA synthetase subunit beta [Hyphomicrobium sp. MC1]
gi|337761901|emb|CCB67736.1| succinyl-CoA synthetase, beta subunit [Hyphomicrobium sp. MC1]
Length = 399
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 240/424 (56%), Gaps = 39/424 (9%)
Query: 3 MAFNQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLG 62
M ++ A Y V T + +E+A A K L +V+KAQI AGGRG G
Sbjct: 1 MNIHEYQAKELYRQYAVPTPNGFPAFSVEEAIAAA---KKLPGPVWVVKAQIHAGGRGKG 57
Query: 63 HFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRE 119
F G K GV +++++ ++M+G+ L+T QT G VN++ + I RE
Sbjct: 58 KFKEASAGDKGGVRLAKSLEEVETFAKEMLGNTLVTVQTGPAGRVVNRLYIEDGSAIERE 117
Query: 120 TYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFL 179
Y + DR + I+S +GG +IE+VA TP + T+ ID G +
Sbjct: 118 LYLSALVDRASSRVAFIVSQAGGMNIEDVAHDTPEKIHTLTIDPATG-----------YQ 166
Query: 180 EFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDAT 239
F G +K+A L GD V+ L+ + + D +
Sbjct: 167 PFHG----------------------RKVAFALGLTGDQVKTCGKLVENLFRMVVEKDMS 204
Query: 240 QLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVG 299
LEINPLV T + ++I +D K++FD NA +R I + ++ E DP E++ASKY+L +V
Sbjct: 205 LLEINPLVVTKDGKLICLDGKMDFDSNALYRHPEIVAMRDLGEEDPTEIEASKYDLAFVK 264
Query: 300 MDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCI 359
+DGNIGCLVNGAGLAMATMDIIKL+G EPANFLDVGGG ++E + AF++I D VK I
Sbjct: 265 LDGNIGCLVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVQAAFKLILEDPAVKGI 324
Query: 360 LVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 419
LVN+FGGI+ C IA+G+V A + +++PLVVRLEGTNV GK+IL ES L +I A DL
Sbjct: 325 LVNIFGGIMRCDIIAEGVVAAAREMAINVPLVVRLEGTNVDLGKKILKESGLKIIPADDL 384
Query: 420 DEAA 423
+AA
Sbjct: 385 ADAA 388
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A + +++PLVVRLEGTNV GK+IL ES L +I A DL +AA
Sbjct: 339 AEGVVAAAREMAINVPLVVRLEGTNVDLGKKILKESGLKIIPADDLADAAK 389
>gi|218781620|ref|YP_002432938.1| succinyl-CoA synthetase subunit beta [Desulfatibacillum
alkenivorans AK-01]
gi|226734943|sp|B8FLW6.1|SUCC_DESAA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|218763004|gb|ACL05470.1| Succinate-CoA ligase (ADP-forming), beta subunit [Desulfatibacillum
alkenivorans AK-01]
Length = 386
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 178/417 (42%), Positives = 240/417 (57%), Gaps = 48/417 (11%)
Query: 10 ANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFK 69
AN+ V V S D+ A K+L V+KAQI A G
Sbjct: 13 ANYGVPVPKGKPVFSVDE--------AVEAAKELGDFPVVVKAQIHA-------GGRGKG 57
Query: 70 SGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRL 129
GV N+ ++ I +++G +L+T QT G V K++V + ++I +E YF I+ DR
Sbjct: 58 GGVKLAQNIDEVKTIAGEILGMQLVTHQTGPEGQKVQKLLVEQGLDIAKELYFSIIVDRA 117
Query: 130 HNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKA 189
V++ S +GG DIE VAA TP + +P+D L QG +A
Sbjct: 118 TAKIVIMCSEAGGMDIEEVAASTPEKIIKVPVD--------------PLLGVQGYHCRQA 163
Query: 190 ATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVET 249
A + L L A I F++ VQ L+ +F+ D + LEINPLV T
Sbjct: 164 A------YRLNLPPAA--IKPFIKM-----------VQGLYKMFMDTDCSLLEINPLVLT 204
Query: 250 DEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVN 309
+ +I++DAKINFDD+A +R K+I ++ E +P EV+ASK+NLNY+ MDGN+G +VN
Sbjct: 205 GDDGIIALDAKINFDDSALYRHKDIQEYRDLDEEEPLEVEASKFNLNYIKMDGNVGNMVN 264
Query: 310 GAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVN 369
GAGLAMATMDIIK G EPANFLDVGGG N E + FRII SD NVK IL+N+FGGI+
Sbjct: 265 GAGLAMATMDIIKQAGAEPANFLDVGGGANAEQVENGFRIILSDKNVKGILINIFGGILR 324
Query: 370 CATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
C +A G+V A K L++P+VVR+EGTNV+EG+RIL ES L L A DL +AA+ V
Sbjct: 325 CDVLASGVVEAAKKVGLNVPVVVRMEGTNVEEGRRILAESGLNLTGAEDLKDAAAKV 381
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +V A K L++P+VVR+EGTNV+EG+RIL ES L L A DL +AA
Sbjct: 329 ASGVVEAAKKVGLNVPVVVRMEGTNVEEGRRILAESGLNLTGAEDLKDAA 378
>gi|113461100|ref|YP_719168.1| succinyl-CoA synthetase subunit beta [Haemophilus somnus 129PT]
gi|123031314|sp|Q0I3A8.1|SUCC_HAES1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|112823143|gb|ABI25232.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Haemophilus
somnus 129PT]
Length = 389
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 165/404 (40%), Positives = 230/404 (56%), Gaps = 42/404 (10%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
VC E+ A + ++ L+ +++ K QI AGGRG GV + Q++ K
Sbjct: 24 VC-ENVEQALSAIEKLSGSQWIAKCQIHAGGRGKA-------GGVKVVKSAQEVRSFFTK 75
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
+G +L+T QT + G ++++ + I +E Y + DR V + S GG DIE
Sbjct: 76 FLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYLSAIIDRSSQRIVFMASSEGGMDIEE 135
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA KTPHL+ + ID G +++A L G ++Q+ +F
Sbjct: 136 VAEKTPHLLHRVTIDPLVGAMPYQGRELAFKLGLSG-------KQIQQFSQIFC------ 182
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L LF+ D + LEINPLV E+ +DAK+ DDNA
Sbjct: 183 --------------------QLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNA 222
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R ++FS ++++ DPRE +A K+NLNYV +DGNIGC+VNGAGLAM TMDIIKLHGG
Sbjct: 223 LYRHPDLFSMRDLTQEDPREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIIKLHGGR 282
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E +++AF+II +DS VK +LVN+FGGIV C IAKG+V+A +S
Sbjct: 283 PANFLDVGGGATKERVMEAFKIILTDSAVKAVLVNIFGGIVRCDLIAKGIVSAINEIGVS 342
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACK 430
+P++VRLEGTN G IL +S L LI + L EAA VNA K
Sbjct: 343 VPVIVRLEGTNADLGCEILAQSNLNLIAVNSLTEAAEQAVNAAK 386
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V+A +S+P++VRLEGTN G IL +S L LI + L EAA
Sbjct: 329 AKGIVSAINEIGVSVPVIVRLEGTNADLGCEILAQSNLNLIAVNSLTEAA 378
>gi|194014747|ref|ZP_03053364.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
63) (VEG63) [Bacillus pumilus ATCC 7061]
gi|194013773|gb|EDW23338.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
63) (VEG63) [Bacillus pumilus ATCC 7061]
Length = 386
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 229/376 (60%), Gaps = 40/376 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YV+KAQI AGGRG GV ++ E+++G L+T QT G + +
Sbjct: 43 YVVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+++ + +I +E Y +V DR + V++ S GGT+IE VA KTP + + ID G+
Sbjct: 96 LLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGL 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
A+++A F+ ++ K + K F++SL
Sbjct: 156 QGYQAREVA----FKINIPTKLVGQAVK----FMTSL----------------------- 184
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
+N F+ D + EINPLV T + +V+++DAK+NFD NA +RQK+I ++ E DP+E
Sbjct: 185 --YNAFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILEYRDLDEEDPKE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GG+PANFLDVGGG E + +AF
Sbjct: 243 IEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVGGGATAEKVTEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV+ GK+IL
Sbjct: 303 KIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLEGTNVELGKKILS 362
Query: 408 ESKLPLIFASDLDEAA 423
+S L + A + + A
Sbjct: 363 DSGLNITSAESMADGA 378
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL +S L + A + + A +
Sbjct: 329 AEGVVEATKQVGLTLPLVVRLEGTNVELGKKILSDSGLNITSAESMADGAEKIV 382
>gi|330813453|ref|YP_004357692.1| succinyl-CoA ligase subunit beta [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486548|gb|AEA80953.1| succinyl-CoA ligase [ADP-forming] beta chain [Candidatus
Pelagibacter sp. IMCC9063]
Length = 386
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 232/392 (59%), Gaps = 41/392 (10%)
Query: 40 LKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTP 99
K + + V+KAQI AGGRG GV +N++ + + ++G L+T QT
Sbjct: 35 FKKIKTDKVVLKAQIHAGGRGKA-------GGVKIVDNLEQLKEEAKNLLGKVLVTHQTG 87
Query: 100 KTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTI 159
G V ++ + ++ +I++E Y + DR + I S GG DIE VA KTP + T
Sbjct: 88 PQGREVKRLYIEEASDISKEFYLSCLVDRASSKIAFISSAEGGMDIEEVANKTPEKITTT 147
Query: 160 PIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLK 219
+ + +G+T+ +DI T+V K + L S+ Q
Sbjct: 148 RVSLSKGLTK---EDI---------------TQVLKPYQLPSESIEQ------------- 176
Query: 220 AKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNE 279
A +Q ++ L+ DA +E+NPL+ T E +V+ +DAKINFD NA +R +I +
Sbjct: 177 --AEKLIQSIFKALLNTDANLIEVNPLILTKENQVLCLDAKINFDANALYRHPDILELRD 234
Query: 280 VSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVN 339
E DP E++ASKY+L Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG
Sbjct: 235 FDEEDPAEIEASKYDLAYIKLDGEIGCMVNGAGLAMATMDIIKLYGSEPANFLDVGGGAT 294
Query: 340 EESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNV 399
+E + AF II SD NVK IL+N+FGGI+ C IA+G++ A K LS+PLVVRL GT
Sbjct: 295 KEKVSAAFNIILSDKNVKGILINIFGGIMRCDVIAEGVIAAAKETNLSVPLVVRLAGTKF 354
Query: 400 QEGKRILDESKLPLIFASDLDEAAS-LVNACK 430
+EGK+IL++S L +I A+DL EAA +V A K
Sbjct: 355 EEGKKILEQSGLKIIPANDLSEAAQKIVEAIK 386
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K LS+PLVVRL GT +EGK+IL++S L +I A+DL EAA + A
Sbjct: 329 AEGVIAAAKETNLSVPLVVRLAGTKFEEGKKILEQSGLKIIPANDLSEAAQKIVEA 384
>gi|315658465|ref|ZP_07911337.1| succinyl-CoA ligase subunit beta [Staphylococcus lugdunensis
M23590]
gi|315496794|gb|EFU85117.1| succinyl-CoA ligase subunit beta [Staphylococcus lugdunensis
M23590]
Length = 388
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/394 (42%), Positives = 233/394 (59%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AKEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEVKRLYIERGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA + + KAA FL SL
Sbjct: 141 PGKIFKETIDPVVGLSPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T + EV+++DAKINFDDNA FR K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 348 RLEGTNVKRGKEILNDSGLAIEPAATMAEGAQKI 381
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVKRGKEILNDSGLAIEPAATMAEGAQKIV 382
>gi|407795750|ref|ZP_11142708.1| succinyl-CoA synthetase subunit beta [Salimicrobium sp. MJ3]
gi|407020091|gb|EKE32805.1| succinyl-CoA synthetase subunit beta [Salimicrobium sp. MJ3]
Length = 386
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 227/375 (60%), Gaps = 40/375 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV ++ D+ E+++G L+T QT G V ++
Sbjct: 44 VVKAQIHAGGRG-------NAGGVKIAKSLDDVRTYAEELLGKTLVTHQTGSEGKEVKRL 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ + +I E Y +V DR + ++ S GGT+IE VA +TP + ID G+T
Sbjct: 97 LIEEGCDIKNEYYVGLVLDRNTSRVTMMASEEGGTEIEQVAEETPEKIFKEVIDPVVGLT 156
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
FQ A+++A + + +KA +
Sbjct: 157 P-----------FQ----------------------ARRLAFNINIPKESLSKAVKFMLG 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+++F+ D + EINPLV T E EV+++D+K+NFDDNA FRQK+I ++ E DP+E+
Sbjct: 184 LYDVFMKKDCSIAEINPLVTTGEGEVLALDSKLNFDDNALFRQKDIADLRDLDEEDPKEI 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASKY+L+Y+ +DGNIGC+VNGAGLAMATMD IK +GGEPANFLDVGGG ++E + AF+
Sbjct: 244 EASKYDLSYIALDGNIGCMVNGAGLAMATMDTIKHYGGEPANFLDVGGGASKEKVTGAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
+I SD NV I VN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV+EGKRILDE
Sbjct: 304 LILSDENVNGIFVNIFGGIMKCDVIAEGIVAASKEIGLELPLVVRLEGTNVKEGKRILDE 363
Query: 409 SKLPLIFASDLDEAA 423
S L + A + + A
Sbjct: 364 SGLNITAADSMADGA 378
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV+EGKRILDES L + A + + A +
Sbjct: 329 AEGIVAASKEIGLELPLVVRLEGTNVKEGKRILDESGLNITAADSMADGAQKIV 382
>gi|448100179|ref|XP_004199292.1| Piso0_002724 [Millerozyma farinosa CBS 7064]
gi|359380714|emb|CCE82955.1| Piso0_002724 [Millerozyma farinosa CBS 7064]
Length = 313
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 208/336 (61%), Gaps = 33/336 (9%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+GHKLITKQT G V + + + E Y + DR P+++ S GG DIE
Sbjct: 1 MLGHKLITKQTGAAGKEVTAAYIVERRDAKTEAYLAFLLDRASQTPMIVASSQGGMDIEG 60
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAAK P+ +KT + + +G+++ LA ++A L F S AQ
Sbjct: 61 VAAKDPNAIKTFSVPLKEGVSDKLASEVASVLGF--------------------SQEAQ- 99
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
A+AA VQ L+ +F D TQ+EINPL E+ + +V+++DAK+ FDDNA
Sbjct: 100 ------------AEAAKTVQNLYKVFTERDCTQVEINPLSESTDGKVLAMDAKLGFDDNA 147
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FRQ+ +FS + ++ DP+E +A+KY LN++ +DGNI +VNGAGLAMATMDIIKL+GGE
Sbjct: 148 SFRQEEVFSWRDPTQEDPQEAEAAKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLYGGE 207
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLD GG ++I +AF +I SD V I VN+FGGIV C +A+GL+ A K+FKL
Sbjct: 208 PANFLDCGGTATPQTIEKAFDLILSDKKVNGIFVNIFGGIVRCDYVAEGLIAATKNFKLD 267
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
IP+VVRL+GTN+ + K +++ S L L DLD AA
Sbjct: 268 IPVVVRLQGTNLAKAKELIENSGLKLFAFEDLDPAA 303
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+FKL IP+VVRL+GTN+ + K +++ S L L DLD AA +
Sbjct: 254 AEGLIAATKNFKLDIPVVVRLQGTNLAKAKELIENSGLKLFAFEDLDPAAEKIV 307
>gi|209885674|ref|YP_002289531.1| succinyl-CoA synthetase subunit beta [Oligotropha carboxidovorans
OM5]
gi|337740736|ref|YP_004632464.1| succinyl-CoA ligase [ADP-forming] subunit beta [Oligotropha
carboxidovorans OM5]
gi|386029753|ref|YP_005950528.1| succinyl-CoA ligase subunit beta [Oligotropha carboxidovorans OM4]
gi|226734966|sp|B6JE33.1|SUCC_OLICO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|209873870|gb|ACI93666.1| succinyl-CoA synthetase beta chain (SCS-alpha) [Oligotropha
carboxidovorans OM5]
gi|336094821|gb|AEI02647.1| succinyl-CoA ligase [ADP-forming] subunit beta [Oligotropha
carboxidovorans OM4]
gi|336098400|gb|AEI06223.1| succinyl-CoA ligase [ADP-forming] subunit beta [Oligotropha
carboxidovorans OM5]
Length = 398
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/403 (41%), Positives = 238/403 (59%), Gaps = 37/403 (9%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMI 89
A A K L +V+K+QI AGGRG G F G K GV ++ ++ +++M+
Sbjct: 28 ASDAEAAAKQLGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKQFVDQML 87
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G L+T QT G VN++ + + +I +E Y + DR + ++S GG DIE VA
Sbjct: 88 GKTLVTVQTGPAGKQVNRLYLEEGADIDKEFYLSALVDRETSRIAFVVSTEGGMDIEKVA 147
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
TP + T +D GI + +K+A
Sbjct: 148 HDTPEKIVTFSVDPATGI---------------------------------MPHHGRKVA 174
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L+ +GD +A V +L+ F++ D + LEINPL+ + + E+ +DAKI+FD NA +
Sbjct: 175 QALKLKGDQAKQAEKLVNQLYTAFIAKDMSMLEINPLILSKQGELRCLDAKISFDSNAIY 234
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R ++ + +E D +E++ASKY+L Y+ +DG IGC+VNGAGLAMAT+DIIKL+G PA
Sbjct: 235 RHPDVMELRDETEEDAKEIEASKYDLAYIALDGTIGCMVNGAGLAMATLDIIKLYGESPA 294
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG +EE + AF+II++D NVK ILVN+FGGI+ C IA G+V A K+ L +P
Sbjct: 295 NFLDVGGGASEEKVTAAFKIITADPNVKGILVNIFGGIMKCDVIAAGVVAAVKAVGLKVP 354
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
LVVRLEGTNV+EGK+I+ ES L ++ A DLD+AA +V A K
Sbjct: 355 LVVRLEGTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKAVKG 397
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 482 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
L +PLVVRLEGTNV+EGK+I+ ES L ++ A DLD+AA + A
Sbjct: 351 LKVPLVVRLEGTNVEEGKKIIRESGLNVLPADDLDDAAQKIVKA 394
>gi|126730338|ref|ZP_01746149.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
gi|126709071|gb|EBA08126.1| succinyl-CoA synthetase subunit beta [Sagittula stellata E-37]
Length = 397
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 227/405 (56%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
E+A+TA L + +V+KAQI AGGRG G F D G K GV +V++ +K
Sbjct: 29 EEAKTAAGAL---DGPLWVVKAQIHAGGRGKGSFKEADAGEKGGVRLAKSVEEAAEEAKK 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I RE Y ++ DR + + S GG DIE
Sbjct: 86 MLGKTLVTHQTGPAGKQVNRIYIEDGSDIERELYLALLVDRQTSRISFVCSTEGGMDIEE 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VAA TP + + +D G + IA F L KL +
Sbjct: 146 VAASTPEKILSFSVDPATGYQPFHGRRIA----FALGLDKAGQKHCVKLMGI-------- 193
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
L+ F+ D LEINPL+ + + +DAK+ FD NA
Sbjct: 194 ---------------------LYKAFVEKDMEMLEINPLIVLKDGTLKVLDAKLGFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+RQ + + +E D +E+ ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LYRQAEVAELRDETEEDSKELQASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDKNVKGILVNIFGGIMRCDIIAEGVIAAVKEVGLQ 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+PLVVRLEGTNV++GK I+ S L +I A DL D A +V A K
Sbjct: 353 VPLVVRLEGTNVEKGKEIIANSGLNVIAADDLKDGAEKIVKAVKG 397
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLQVPLVVRLEGTNVEKGKEIIANSGLNVIAADDLKDGAEKIVKA 394
>gi|314936592|ref|ZP_07843939.1| succinyl-CoA synthase, beta subunit [Staphylococcus hominis subsp.
hominis C80]
gi|313655211|gb|EFS18956.1| succinyl-CoA synthase, beta subunit [Staphylococcus hominis subsp.
hominis C80]
Length = 388
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 233/394 (59%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN + YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELNSEVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ FQ A++IA +
Sbjct: 141 PEKIFKETIDPVIGLSP-----------FQ----------------------ARRIAFNI 167
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KAA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 168 NIPKESVNKAAKFLLSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E+ ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 348 RLEGTNVKRGKEILNESGLAIEPAATMAEGAQQI 381
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVKRGKEILNESGLAIEPAATMAEGAQQIV 382
>gi|260425789|ref|ZP_05779769.1| succinyl-CoA synthetase beta chain [Citreicella sp. SE45]
gi|260423729|gb|EEX16979.1| succinyl-CoA synthetase beta chain [Citreicella sp. SE45]
Length = 397
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/404 (41%), Positives = 232/404 (57%), Gaps = 40/404 (9%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKM 88
DA+TA +L+ +V+KAQI AGGRG G F + G K GV +V++ +M
Sbjct: 30 DAKTAAG---ELDGPLWVVKAQIHAGGRGKGSFKESEAGEKGGVRLAKSVEEAAEEANRM 86
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+GH L+T QT G VN++ + +IT E Y ++ DR+ + ++ S GG DIE V
Sbjct: 87 LGHTLVTHQTGPAGKQVNRIYIEDGSDITSEFYLALLVDRVTSRVSIVCSTEGGMDIEEV 146
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
AA TP + + ID G + +A L G ++++ NL
Sbjct: 147 AASTPEKILSFSIDPAVGYQGFHGRRVAFALGLSG-------KQIRQCTNLL-------- 191
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
L+ +F+ D LEINPL+ T + ++ +D K FD NA
Sbjct: 192 ------------------SNLYRMFVEKDMEMLEINPLIVTTDGDLKCLDCKAGFDGNAL 233
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+R +I + +E DP+E+ AS+++LNY+ +DG IGC+VNGAGLAMATMDIIKL+G EP
Sbjct: 234 YRHPDIVGLRDETEEDPKELAASQHDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEP 293
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG +E + +AF+II+SD NVK ILVN+FGGI+ C IA+G++ A K L +
Sbjct: 294 ANFLDVGGGATKEKVTEAFKIITSDPNVKGILVNIFGGIMRCDVIAEGVLAAVKEVGLQV 353
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
PLVVRLEGTNV GK I+ S L +I A +L D A +V A K
Sbjct: 354 PLVVRLEGTNVDLGKEIIANSGLNVIAADNLSDGAEKIVKAVKG 397
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV GK I+ S L +I A +L + A + A
Sbjct: 339 AEGVLAAVKEVGLQVPLVVRLEGTNVDLGKEIIANSGLNVIAADNLSDGAEKIVKA 394
>gi|194335891|ref|YP_002017685.1| succinyl-CoA synthetase subunit beta [Pelodictyon
phaeoclathratiforme BU-1]
gi|226734969|sp|B4SEH6.1|SUCC_PELPB RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|194308368|gb|ACF43068.1| succinyl-CoA synthetase, beta subunit [Pelodictyon
phaeoclathratiforme BU-1]
Length = 392
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 168/397 (42%), Positives = 230/397 (57%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + +L VIKAQI AGGRG GV + ++ I ++IG
Sbjct: 30 EAKQAAEQLFDELGCPVVVIKAQIHAGGRGKA-------GGVKLAKSPEESLDIAHQLIG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
LIT QT G V +V+V + +NI +E Y I DR + V+++S GG +IE VA
Sbjct: 83 MTLITHQTGPEGKEVRRVLVEEGMNIEKEFYVGITLDRSTSKNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I ID G+ A++ A FL +G+
Sbjct: 143 ETPERLLKIQIDPLFGMQGFQAREAAFFLGLKGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+FR A + L+N ++S+DA EINPLV T E +V+++DAKINFDDNA FR
Sbjct: 177 --QFR-----NAVNFITALYNAYISIDAALAEINPLVVTKEGKVLALDAKINFDDNALFR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
K + +E DP EV+ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG+PAN
Sbjct: 230 HKEFHELRDTNEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGG + +++ + F+II SD NVK ILVN+FGGIV C +A G++ A K L +P+
Sbjct: 290 FLDVGGSASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKIDLHLPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN +++LD+S L LI A L +AA V
Sbjct: 350 IVRLEGTNAPIAQKMLDDSGLNLIAAKGLRDAAQKVQ 386
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L +P++VRLEGTN +++LD+S L LI A L +AA
Sbjct: 333 AGGIIEAAKKIDLHLPVIVRLEGTNAPIAQKMLDDSGLNLIAAKGLRDAAQ 383
>gi|387927050|ref|ZP_10129729.1| succinyl-CoA synthetase subunit beta [Bacillus methanolicus PB1]
gi|387589194|gb|EIJ81514.1| succinyl-CoA synthetase subunit beta [Bacillus methanolicus PB1]
Length = 385
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 233/388 (60%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV +++++ +++G L+T
Sbjct: 31 AVEAAKELGTEVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASEILGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSRVVLMASEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+T FQ A++IA +
Sbjct: 144 IFKEEIDPVVGLTS-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ ++ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVNQAVKFMMGLYQAYIQKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDI+K +GGEPANFLDVG
Sbjct: 231 ELRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGASAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIATGVVEAAKQVGLNVPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L +I A + + A
Sbjct: 351 GTNVELGKKILNESGLNIIAAESMADGA 378
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL+ES L +I A + + A +
Sbjct: 329 ATGVVEAAKQVGLNVPLVVRLEGTNVELGKKILNESGLNIIAAESMADGAQKIV 382
>gi|418576369|ref|ZP_13140515.1| succinyl-CoA synthetase subunit beta [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325431|gb|EHY92563.1| succinyl-CoA synthetase subunit beta [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 388
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 230/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ K YV+KAQI AGGRG GV ++ ++ ++++G
Sbjct: 28 AEEAVEKAKELDSKVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEIKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVVGLAPYQARRIAFNINIPKESINKAAK--------FLVSL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T E EV+++DAK+NFDDNA F+ K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTGEGEVLALDAKVNFDDNALFKHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E +ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKETEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDENVKGIFVNIFGGIMKCDIIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL ES L + A+ + E A +
Sbjct: 348 RLEGTNVERGKEILKESGLAIEPAATMAEGAQKI 381
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILKESGLAIEPAATMAEGAQKIV 382
>gi|254796635|ref|YP_003081471.1| succinyl-CoA synthetase beta chain [Neorickettsia risticii str.
Illinois]
gi|254589873|gb|ACT69235.1| succinyl-CoA synthetase beta chain [Neorickettsia risticii str.
Illinois]
Length = 392
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 226/384 (58%), Gaps = 40/384 (10%)
Query: 40 LKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTP 99
L L + + +KAQI AGGRG GV +V++ +KM+G L+T QT
Sbjct: 38 LARLGGEVFAVKAQIHAGGRGKA-------GGVVICRSVEEAIDNTKKMLGMNLVTHQTS 90
Query: 100 KTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTI 159
G V KV + +I +E Y +V DR +I S GG +IE VA P +K +
Sbjct: 91 PAGQKVRKVYIEAGQSILKEYYLSMVVDRESAKVAIIASEEGGMEIEEVARLKPEKIKKV 150
Query: 160 PIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLK 219
+D GI++ + I + L LS LAQ I F
Sbjct: 151 FVDPSIGISDFHTRKIG--------------------FELGLS-LAQ-IKQFTPL----- 183
Query: 220 AKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNE 279
V+KL+ LF++ DA+Q+EINPL+ E I++DAKINFDDNA +R + +
Sbjct: 184 ------VKKLYALFVTRDASQVEINPLIANSRGEFIALDAKINFDDNALYRHPDTLELRD 237
Query: 280 VSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVN 339
+ E DP+E++ASKYNLNY+ M+G+IGC+VNGAGLAMATMDIIK +G PANFLDVGGG N
Sbjct: 238 LYEEDPKEIEASKYNLNYIKMEGDIGCMVNGAGLAMATMDIIKYYGASPANFLDVGGGAN 297
Query: 340 EESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNV 399
E + AF+IISSD +V ILVN+FGGI+ C IAKG+V A K L++PLVVRL GTN
Sbjct: 298 LEQVTNAFKIISSDKHVTGILVNIFGGIMRCDIIAKGIVAAAKDIGLTMPLVVRLSGTNY 357
Query: 400 QEGKRILDESKLPLIFASDLDEAA 423
G +I+++S L ++ AS+L +AA
Sbjct: 358 SAGMKIIEDSGLNIVTASELGDAA 381
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRL GTN G +I+++S L ++ AS+L +AA +
Sbjct: 332 AKGIVAAAKDIGLTMPLVVRLSGTNYSAGMKIIEDSGLNIVTASELGDAAQKIV 385
>gi|225848460|ref|YP_002728623.1| succinyl-CoA synthetase subunit beta [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644651|gb|ACN99701.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
63) (VEG63) [Sulfurihydrogenibium azorense Az-Fu1]
Length = 388
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 232/392 (59%), Gaps = 40/392 (10%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
D + A ++L V+KAQI AGGRG GV +++++ I +++G
Sbjct: 27 DVKEAVEAAEELGTWPVVVKAQIHAGGRGKA-------GGVKLAKSIEEVQQIAAELLGK 79
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
KL+T QT G+ V+++ + + I +E Y I DR + P++++S +GG +IE VAA
Sbjct: 80 KLVTFQTGPEGLPVSRLYIEEGTAIDKEYYVAITLDRSKSKPIIMVSAAGGMEIEEVAAT 139
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
P + T I+ G+ A+++A L +L KAA NLF++
Sbjct: 140 NPEAIITHTIEPFIGLRSYHARELALKLGLPKNLLNKAA-------NLFMT--------- 183
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
L+ +++ +DA+ +EINPLV T + ++ +DAKI+FDDN FR
Sbjct: 184 -----------------LYKIYIELDASMVEINPLVLTKDGNLVILDAKIDFDDNGLFRH 226
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
I ++ ++ P EV+A K+NLNY+ +DGNI C+VNGAGLAM+TMD IKL GGEPANF
Sbjct: 227 PEIMEMDDPTQISPLEVEAKKFNLNYIKLDGNIACMVNGAGLAMSTMDTIKLAGGEPANF 286
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGG N I AF+II SD NVK I +N+FGGI+ C +A+G++ A K +++P++
Sbjct: 287 LDVGGSANATQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIITAAKEVSINVPVI 346
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VR+EGTNV+ GK++L ES LPLI A + E A
Sbjct: 347 VRMEGTNVELGKKMLQESGLPLITADTMWEGA 378
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K +++P++VR+EGTNV+ GK++L ES LPLI A + E A
Sbjct: 329 AEGIITAAKEVSINVPVIVRMEGTNVELGKKMLQESGLPLITADTMWEGA 378
>gi|114328734|ref|YP_745891.1| succinyl-CoA synthetase subunit beta [Granulibacter bethesdensis
CGDNIH1]
gi|114316908|gb|ABI62968.1| succinyl-CoA synthetase beta chain [Granulibacter bethesdensis
CGDNIH1]
Length = 398
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 231/386 (59%), Gaps = 38/386 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKM 88
++AR A + L YV+KAQI AGGRG GHF + GV +V++ M
Sbjct: 29 DEAREAA---RRLPGPRYVVKAQIHAGGRGAGHFLHSQSGRGGVRLAASVEEAGEHAAAM 85
Query: 89 IGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENV 148
+G L+TKQT G V++V + I RE Y ++ DR + ++ S GG DIE V
Sbjct: 86 LGQILVTKQTGAAGRRVHRVYIEAGCEIERELYLSLLVDRDTSRVTIVASAEGGMDIEEV 145
Query: 149 AAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKI 208
AA P + + +D G++E A+ IA + L LS + ++
Sbjct: 146 AASRPERIVRVTVDPAMGLSEFHARRIA--------------------FRLGLSGM--QL 183
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
A F V+ L+ ++++D +EINPLV T +++++DAK+ FDDNA
Sbjct: 184 ASFGRM-----------VKALYKAYIALDCAVVEINPLVVTKGGDMLALDAKVIFDDNAL 232
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+R + + +E DP+E++A+++ L+Y+ +DG IGC+VNGAGLAMATMDII+L+G +P
Sbjct: 233 YRHPELERLRDPAEEDPKELEAARHKLSYIALDGTIGCMVNGAGLAMATMDIIRLYGAKP 292
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG +E + AF+II +D NV+ IL+N+FGGI+ C IA+G+V A + LS+
Sbjct: 293 ANFLDVGGGATKERVAAAFKIILADPNVEGILINIFGGIMRCDVIAEGVVAAAREVSLSV 352
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLI 414
PLVVRLEGTNV++G+ IL++S L ++
Sbjct: 353 PLVVRLEGTNVEQGRAILNQSGLSIV 378
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A + LS+PLVVRLEGTNV++G+ IL++S L ++
Sbjct: 338 AEGVVAAAREVSLSVPLVVRLEGTNVEQGRAILNQSGLSIV 378
>gi|162148723|ref|YP_001603184.1| succinyl-CoA synthetase beta chain [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545510|ref|YP_002277739.1| succinyl-CoA synthetase subunit beta [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787300|emb|CAP56894.1| putative succinyl-CoA synthetase beta chain [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533187|gb|ACI53124.1| succinyl-CoA synthetase, beta subunit [Gluconacetobacter
diazotrophicus PAl 5]
Length = 404
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 222/383 (57%), Gaps = 35/383 (9%)
Query: 49 VIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVN 106
V+KAQI AGGRG GHF D G K GV +D M+ L+T+QT G V
Sbjct: 44 VVKAQIHAGGRGAGHFAHDPGGKGGVRLARTPEDAEQAAIAMLDQTLVTRQTGSAGRVVR 103
Query: 107 KVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQG 166
++ + +I RE Y ++ DR V++ S GG IE+VAA TP + PID G
Sbjct: 104 RLYIEAGCDIGRELYLSLLVDRGTGRIVIVASQDGGMAIEDVAAATPERILKEPIDPATG 163
Query: 167 ITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEV 226
+++ A+ +A L+ G + I F T +
Sbjct: 164 LSDYQARTLAARLDLHG----------------------RSIRAF-----------TTVL 190
Query: 227 QKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPR 286
+ ++ F+++DA +EINPLV T +++++DAK++FDDNA FR + + +E DPR
Sbjct: 191 RAAYDAFVALDAAIVEINPLVVTRSGDLLALDAKMSFDDNALFRHPELEELRDENEEDPR 250
Query: 287 EVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQA 346
E +A+++ L YVG+DG IGC+VNGAGLAMATMDIIK+ G EPANFLDVGGG E + A
Sbjct: 251 EREAARHGLAYVGLDGTIGCMVNGAGLAMATMDIIKMEGEEPANFLDVGGGATRERVAAA 310
Query: 347 FRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRIL 406
FRI+ SD V+ ILVN+FGGI+ C IA +V A + L +PLVVRL GTNV++G +IL
Sbjct: 311 FRILLSDRKVRGILVNIFGGIMRCDIIADAIVAASRETGLHVPLVVRLAGTNVEQGHQIL 370
Query: 407 DESKLPLIFASDLDEAASLVNAC 429
S L +I A DL +AA+ + A
Sbjct: 371 SASGLRIIPADDLADAATKIVAA 393
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++V A + L +PLVVRL GTNV++G +IL S L +I A DL +AA + A
Sbjct: 338 ADAIVAASRETGLHVPLVVRLAGTNVEQGHQILSASGLRIIPADDLADAATKIVAA 393
>gi|413965071|ref|ZP_11404297.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. SJ98]
gi|413927745|gb|EKS67034.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. SJ98]
Length = 400
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 226/378 (59%), Gaps = 35/378 (9%)
Query: 48 YVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+V+K+QI AGGRG G F D K GV +V ++ +KM+ L+TKQT G V
Sbjct: 43 WVVKSQIHAGGRGAGRFANDPDGKGGVRVVKSVDEVRENAQKMLASVLVTKQTGPAGKEV 102
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
++ V + +I RE Y ++ DR ++ ++ S GG +IE VA +TP + + ID
Sbjct: 103 KRLYVEEGCDIARELYLGMLVDRANSRITIMASTEGGMEIEEVAHRTPEKILKVAIDPAT 162
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+ + IA L G+ + KAA++
Sbjct: 163 GLQPFHTRQIAFGLGLTGN-QIKAASKF-------------------------------- 189
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
V L+ F+ +DA+ +E+NPLV T +V+++DAK+NFDDNA +R +I + E DP
Sbjct: 190 VTALYQAFVDLDASIVEVNPLVVTGSGDVMALDAKLNFDDNALYRHPDIEKLRDEDEEDP 249
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E++A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG +E +
Sbjct: 250 AEIEAAKHGLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATQERVAT 309
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF++I D V+ ILVN+FGGI+ C IA+G+V A + LS+PLVVRL GTNV G+ I
Sbjct: 310 AFKLILRDPKVQGILVNIFGGIMRCDVIAQGVVAAAREIDLSVPLVVRLAGTNVDAGREI 369
Query: 406 LDESKLPLIFASDLDEAA 423
L S L +I A +L +AA
Sbjct: 370 LRTSGLTIIPAENLADAA 387
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + LS+PLVVRL GTNV G+ IL S L +I A +L +AA+ + A
Sbjct: 338 AQGVVAAAREIDLSVPLVVRLAGTNVDAGREILRTSGLTIIPAENLADAADKIVSA 393
>gi|440749092|ref|ZP_20928341.1| Succinyl-CoA ligase [ADP-forming] beta chain [Mariniradius
saccharolyticus AK6]
gi|436482453|gb|ELP38568.1| Succinyl-CoA ligase [ADP-forming] beta chain [Mariniradius
saccharolyticus AK6]
Length = 405
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/385 (43%), Positives = 225/385 (58%), Gaps = 39/385 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YVIKAQI AGGRG G GV +D+P ++G L+T QT G VNK
Sbjct: 47 YVIKAQIHAGGRGKGQIKETGSRGVVLAKKQEDVPTKAADILGGTLVTIQTGAEGKKVNK 106
Query: 108 VMVAKSVNI-----TRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
V++A+ V +E Y I+ DR V++ S GG DIE VA K P + ID
Sbjct: 107 VLIAEDVYYPGASEPKEYYLSILLDRGKGCNVIMASTEGGMDIEEVAEKHPEKIIKEWID 166
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
G+ + IA F+ L+ A E+ K F++S
Sbjct: 167 PKFGLQGFQVRKIA----FKLGLEGNAFKEMVK----FITS------------------- 199
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
L+N ++ D++Q EINP+++T + ++++VDAK+N DDNA +R K++ +V+E
Sbjct: 200 ------LYNAYVGSDSSQFEINPVLKTSDDKILAVDAKVNLDDNALYRHKDLADLRDVAE 253
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP EV+A K LNYV +DGN+GC+VNGAGLAMATMD+IKL GGEPANFLDVGGG N +
Sbjct: 254 EDPLEVEAGKSGLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGGEPANFLDVGGGANATT 313
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQE 401
+ FRII D NVK IL+NVFGGIV C IA G+V A +S + +P++VRL+GTN +E
Sbjct: 314 VEAGFRIILQDPNVKAILINVFGGIVRCDRIANGVVEAYRSIGNIPVPIIVRLQGTNAEE 373
Query: 402 GKRILDESKLPLIFASDLDEAASLV 426
G RI+DES L + A L EAA V
Sbjct: 374 GARIIDESGLKVSSAITLKEAAEKV 398
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A +S + +P++VRL+GTN +EG RI+DES L + A L EAA
Sbjct: 345 ANGVVEAYRSIGNIPVPIIVRLQGTNAEEGARIIDESGLKVSSAITLKEAA 395
>gi|420172754|ref|ZP_14679252.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM067]
gi|394241431|gb|EJD86845.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM067]
Length = 388
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 233/392 (59%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA+T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA F ++ ++ V+K L+
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIA----FNINIPKES---VRKATKFLLA---------- 183
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 184 ----------------LYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+ GK IL+ES L + A+ + E A
Sbjct: 348 RLEGTNVERGKAILNESGLAIEPAATMAEGAQ 379
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKAILNESGLAIEPAATMAEGAQKIV 382
>gi|353328284|ref|ZP_08970611.1| succinyl-CoA synthetase subunit beta [Wolbachia endosymbiont wVitB
of Nasonia vitripennis]
Length = 386
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 225/376 (59%), Gaps = 40/376 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+V+KAQI AGGRG GV + ++ +++ M+G L+T QT +G V +
Sbjct: 43 FVVKAQIHAGGRGK-------VDGVKLVKSTKEAQQLVKDMLGITLVTHQTGPSGQQVRR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V + + +I +E Y +V D + V I S GG DIE VA +P + ID G
Sbjct: 96 VYIEEGSSIKKEYYLSLVVDPKLSRLVFIFSSEGGMDIEEVAKNSPTKIVKFDIDPATGF 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
T +A+ + +++++ N+ +
Sbjct: 156 TNLDNSKLANNFNLNSE-------QIERITNI--------------------------AK 182
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
+++ F++ DA+Q+EINPLVET+ + +++DAKINFDDNA +R I + E E
Sbjct: 183 NIYDAFITTDASQIEINPLVETNSGDFVALDAKINFDDNALYRHPEIVQLRDYDEEVKEE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK+ L+Y+ MDGNIGC+VNGAGLAMATMDIIK +G EPANFLDVGGG ++E++ +AF
Sbjct: 243 IEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVGGGASKETVTEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II SDSNV+ ILVN+FGGI+ C IA G+V A K + +PLVVRL GTN +EGKRIL+
Sbjct: 303 KIILSDSNVQGILVNIFGGIMRCDIIANGIVEAAKEIDIKVPLVVRLSGTNFKEGKRILE 362
Query: 408 ESKLPLIFASDLDEAA 423
ES L +I A +LDEAA
Sbjct: 363 ESGLNIIAADELDEAA 378
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K + +PLVVRL GTN +EGKRIL+ES L +I A +LDEAA +
Sbjct: 329 ANGIVEAAKEIDIKVPLVVRLSGTNFKEGKRILEESGLNIIAADELDEAAQKIV 382
>gi|124809017|ref|XP_001348469.1| ATP-specific succinyl-CoA synthetase beta subunit, putative
[Plasmodium falciparum 3D7]
gi|23497363|gb|AAN36908.1|AE014820_58 ATP-specific succinyl-CoA synthetase beta subunit, putative
[Plasmodium falciparum 3D7]
Length = 462
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 225/376 (59%), Gaps = 34/376 (9%)
Query: 49 VIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
VIKAQ+L+GGRG+G+F +N F+ GVH N ++ I KM+ + LITKQ+ G N
Sbjct: 97 VIKAQVLSGGRGVGYFKENNFEGGVHVCRNSMEVKEIATKMLNNTLITKQSGPEGKKCNT 156
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V + + I +E Y + DR +G +++ S GG+ IE++ K P + + ID++ G+
Sbjct: 157 VFICERFYIRKERYIAFLLDRNSDGIILLGSSIGGSSIEDIIKKNPDAIYKLNIDINNGL 216
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
T A++ ++ + F+ D + T++ +
Sbjct: 217 TTGQAREFSENIGFKND-QLNIVTDM--------------------------------IV 243
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ +F D T LEINPL E ++ V+ DAK+NFDDNAE+RQKNIF + ++++ + E
Sbjct: 244 NLYKVFKKYDCTLLEINPLSELNDGRVLCCDAKLNFDDNAEYRQKNIFEKRDLTQENKEE 303
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
+ A KYNLNYV ++GNI C+VNGAGLAMAT+D+I LH G P+NFLDVGGG EE I +A
Sbjct: 304 LLAKKYNLNYVSLNGNIACMVNGAGLAMATLDLIILHKGNPSNFLDVGGGATEEEITEAL 363
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II+++ N K +N+ GGI+ C IA G++NA K K + P+++RLEGTN ++ I+
Sbjct: 364 KIINNNENAKICFINILGGIMRCDIIANGIINAFKQVKFNKPIIIRLEGTNQEQAHEIIK 423
Query: 408 ESKLPLIFASDLDEAA 423
S + I D++ AA
Sbjct: 424 NSNIKCIVCQDMNIAA 439
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++NA K K + P+++RLEGTN ++ I+ S + I D++ AA
Sbjct: 390 ANGIINAFKQVKFNKPIIIRLEGTNQEQAHEIIKNSNIKCIVCQDMNIAA 439
>gi|228475020|ref|ZP_04059748.1| succinyl-CoA synthetase beta chain [Staphylococcus hominis SK119]
gi|418620470|ref|ZP_13183274.1| succinate-CoA ligase, beta subunit [Staphylococcus hominis VCU122]
gi|228271005|gb|EEK12393.1| succinyl-CoA synthetase beta chain [Staphylococcus hominis SK119]
gi|374822600|gb|EHR86620.1| succinate-CoA ligase, beta subunit [Staphylococcus hominis VCU122]
Length = 388
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 232/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ FQ A++IA +
Sbjct: 141 PEKIFKETIDPVIGLSP-----------FQ----------------------ARRIAFNI 167
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KAA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 168 NIPKESVNKAAKFLLSLYNVFVEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E+ ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIQASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 348 RLEGTNVKRGKEILNESGLAIEPAATMAEGAQQI 381
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVKRGKEILNESGLAIEPAATMAEGAQQIV 382
>gi|390575430|ref|ZP_10255528.1| succinyl-CoA synthetase, beta subunit [Burkholderia terrae BS001]
gi|389932599|gb|EIM94629.1| succinyl-CoA synthetase, beta subunit [Burkholderia terrae BS001]
Length = 403
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/384 (44%), Positives = 233/384 (60%), Gaps = 35/384 (9%)
Query: 48 YVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+V+K+QI AGGRG G F D K GV +V D+ +M+ H L+TKQT G V
Sbjct: 43 WVVKSQIHAGGRGAGRFADDPNGKGGVRVVKSVSDVGLDAAQMLSHVLVTKQTGPAGREV 102
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
++ + + I RE Y ++ DR + V+ S GG +IE VAA+TP + + ID
Sbjct: 103 KRIYIEEGCAIERELYLGMLIDRSTSRITVMASTEGGMEIEEVAARTPEKILKVAIDPAT 162
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+ A+ IA L G + K+AT+
Sbjct: 163 GLQPFHARQIAFGLGLTGK-QIKSATQF-------------------------------- 189
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+ + F+ +DA+ +EINPLV T + +VI++DAKINFDDNA FR +I + + +E D
Sbjct: 190 IANAYRAFVELDASIVEINPLVVTQQGDVIALDAKINFDDNALFRHPSIEALRDEAEEDA 249
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E++A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG +E +
Sbjct: 250 AELEAAKHGLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATKERVAT 309
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AFR+I D V+ ILVN+FGGI+ C IA+G+V+A + L +PLVVRLEGTNV+ GK+I
Sbjct: 310 AFRLILRDPKVEGILVNIFGGIMRCDVIAEGVVSAAREVDLRVPLVVRLEGTNVELGKQI 369
Query: 406 LDESKLPLIFASDLDEAASLVNAC 429
L +S LP++ A L +AAS V A
Sbjct: 370 LRDSGLPILSADHLADAASKVVAA 393
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A + L +PLVVRLEGTNV+ GK+IL +S LP++ A L +AA+ + A
Sbjct: 338 AEGVVSAAREVDLRVPLVVRLEGTNVELGKQILRDSGLPILSADHLADAASKVVAA 393
>gi|289550964|ref|YP_003471868.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
lugdunensis HKU09-01]
gi|289180496|gb|ADC87741.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
lugdunensis HKU09-01]
Length = 388
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/394 (42%), Positives = 232/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AKEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAATT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P V ID G++ A+ IA + + KAA FL SL
Sbjct: 141 PEKVFKETIDPVVGLSPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T + EV+++DAKINFDDNA FR K
Sbjct: 185 -----------------YNVFVEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 348 RLEGTNVERGKEILNDSGLAIEPAATMAEGAQKI 381
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILNDSGLAIEPAATMAEGAQKIV 382
>gi|420247799|ref|ZP_14751190.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. BT03]
gi|398070304|gb|EJL61611.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. BT03]
Length = 433
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/384 (44%), Positives = 233/384 (60%), Gaps = 35/384 (9%)
Query: 48 YVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+V+K+QI AGGRG G F D K GV +V D+ +M+ H L+TKQT G V
Sbjct: 73 WVVKSQIHAGGRGAGRFADDPNGKGGVRVVKSVSDVGLDAAQMLSHVLVTKQTGPAGREV 132
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
++ + + I RE Y ++ DR + V+ S GG +IE VAA+TP + + ID
Sbjct: 133 KRIYIEEGCAIERELYLGMLIDRSTSRITVMASTEGGMEIEEVAARTPEKILKVAIDPAT 192
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+ A+ IA L G + K+AT+
Sbjct: 193 GLQPFHARQIAFGLGLTGK-QIKSATQF-------------------------------- 219
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+ + F+ +DA+ +EINPLV T + +VI++DAKINFDDNA FR +I + + +E D
Sbjct: 220 IANAYRAFVELDASIVEINPLVVTQQGDVIALDAKINFDDNALFRHPSIEALRDEAEEDA 279
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E++A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG +E +
Sbjct: 280 AELEAAKHGLNYVTLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATKERVAT 339
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AFR+I D V+ ILVN+FGGI+ C IA+G+V+A + L +PLVVRLEGTNV+ GK+I
Sbjct: 340 AFRLILRDPKVEGILVNIFGGIMRCDVIAEGVVSAAREVDLRVPLVVRLEGTNVELGKQI 399
Query: 406 LDESKLPLIFASDLDEAASLVNAC 429
L +S LP++ A L +AAS V A
Sbjct: 400 LRDSGLPILSADHLADAASKVVAA 423
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A + L +PLVVRLEGTNV+ GK+IL +S LP++ A L +AA+ + A
Sbjct: 368 AEGVVSAAREVDLRVPLVVRLEGTNVELGKQILRDSGLPILSADHLADAASKVVAA 423
>gi|27467841|ref|NP_764478.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
ATCC 12228]
gi|57866713|ref|YP_188395.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
RP62A]
gi|242242529|ref|ZP_04796974.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
W23144]
gi|251810678|ref|ZP_04825151.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876321|ref|ZP_06285188.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
SK135]
gi|416124353|ref|ZP_11595349.1| succinyl-CoA synthetase beta chain [Staphylococcus epidermidis
FRI909]
gi|417647393|ref|ZP_12297233.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU144]
gi|417656528|ref|ZP_12306211.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU028]
gi|417910873|ref|ZP_12554589.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU105]
gi|417913461|ref|ZP_12557128.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU109]
gi|418325839|ref|ZP_12937042.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU071]
gi|418328023|ref|ZP_12939153.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
14.1.R1.SE]
gi|418605398|ref|ZP_13168723.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU041]
gi|418607713|ref|ZP_13170936.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU057]
gi|418609858|ref|ZP_13172992.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU065]
gi|418612144|ref|ZP_13175190.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU117]
gi|418615586|ref|ZP_13178528.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU118]
gi|418622087|ref|ZP_13184843.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU123]
gi|418624417|ref|ZP_13187092.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU125]
gi|418626851|ref|ZP_13189447.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU126]
gi|418628970|ref|ZP_13191486.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU127]
gi|418630428|ref|ZP_13192910.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU128]
gi|418634080|ref|ZP_13196478.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU129]
gi|418664725|ref|ZP_13226191.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU081]
gi|419770936|ref|ZP_14296998.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
aureus IS-K]
gi|420165217|ref|ZP_14671921.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM088]
gi|420169788|ref|ZP_14676366.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM070]
gi|420174985|ref|ZP_14681431.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM061]
gi|420177364|ref|ZP_14683700.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM057]
gi|420179847|ref|ZP_14686123.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM053]
gi|420185449|ref|ZP_14691541.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM040]
gi|420187549|ref|ZP_14693569.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM039]
gi|420189833|ref|ZP_14695792.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM037]
gi|420191706|ref|ZP_14697617.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM023]
gi|420199031|ref|ZP_14704715.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM031]
gi|420202040|ref|ZP_14707635.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM018]
gi|420204169|ref|ZP_14709729.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM015]
gi|420206434|ref|ZP_14711944.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM008]
gi|420209475|ref|ZP_14714912.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM003]
gi|420211863|ref|ZP_14717219.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM001]
gi|420220028|ref|ZP_14725018.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH04008]
gi|420231718|ref|ZP_14736363.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH051668]
gi|420234406|ref|ZP_14738969.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH051475]
gi|421607252|ref|ZP_16048498.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
AU12-03]
gi|38258562|sp|Q8CPH5.1|SUCC_STAES RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|77417490|sp|Q5HPU5.1|SUCC_STAEQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|27315386|gb|AAO04520.1|AE016747_17 succinyl-CoA synthetase beta chain [Staphylococcus epidermidis ATCC
12228]
gi|57637371|gb|AAW54159.1| succinyl-CoA synthase, beta subunit [Staphylococcus epidermidis
RP62A]
gi|242233956|gb|EES36268.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
W23144]
gi|251805838|gb|EES58495.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295346|gb|EFA87873.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
SK135]
gi|319401463|gb|EFV89673.1| succinyl-CoA synthetase beta chain [Staphylococcus epidermidis
FRI909]
gi|329724314|gb|EGG60826.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU144]
gi|329736189|gb|EGG72461.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU028]
gi|341655061|gb|EGS78797.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU105]
gi|341655743|gb|EGS79467.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU109]
gi|365227585|gb|EHM68778.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU071]
gi|365232410|gb|EHM73408.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
14.1.R1.SE]
gi|374402495|gb|EHQ73520.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU041]
gi|374403830|gb|EHQ74825.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU057]
gi|374406194|gb|EHQ77097.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU065]
gi|374410171|gb|EHQ80932.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU081]
gi|374817025|gb|EHR81216.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU118]
gi|374820026|gb|EHR84140.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU117]
gi|374827462|gb|EHR91324.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU123]
gi|374827646|gb|EHR91507.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU125]
gi|374831395|gb|EHR95137.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU126]
gi|374834964|gb|EHR98595.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU127]
gi|374837969|gb|EHS01527.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU128]
gi|374838072|gb|EHS01629.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU129]
gi|383362485|gb|EID39837.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
aureus IS-K]
gi|394236384|gb|EJD81918.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM088]
gi|394243088|gb|EJD88462.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM070]
gi|394244518|gb|EJD89860.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM061]
gi|394247748|gb|EJD92990.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM057]
gi|394252325|gb|EJD97362.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM053]
gi|394254435|gb|EJD99404.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM040]
gi|394255991|gb|EJE00927.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM039]
gi|394259948|gb|EJE04774.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM037]
gi|394265857|gb|EJE10504.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM023]
gi|394270013|gb|EJE14536.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM018]
gi|394272717|gb|EJE17167.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM031]
gi|394274183|gb|EJE18608.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM015]
gi|394278273|gb|EJE22590.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM008]
gi|394278922|gb|EJE23234.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM003]
gi|394280373|gb|EJE24654.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM001]
gi|394287035|gb|EJE31009.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH04008]
gi|394302260|gb|EJE45708.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH051668]
gi|394304209|gb|EJE47616.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH051475]
gi|406657044|gb|EKC83437.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
AU12-03]
Length = 388
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/392 (41%), Positives = 231/392 (58%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA+T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA +N+ +
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIA--------------------FNINIPK--------- 171
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 172 ----ESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+ GK IL+ES L + A+ + E A
Sbjct: 348 RLEGTNVERGKAILNESGLAIEPAATMAEGAQ 379
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKAILNESGLAIEPAATMAEGAQKIV 382
>gi|385784591|ref|YP_005760764.1| putative CoA synthetase protein [Staphylococcus lugdunensis
N920143]
gi|418414266|ref|ZP_12987481.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|339894847|emb|CCB54144.1| putative CoA synthetase protein [Staphylococcus lugdunensis
N920143]
gi|410876873|gb|EKS24770.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 388
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 232/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AKEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAATT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T + EV+++DAKINFDDNA FR K
Sbjct: 185 -----------------YNVFVEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 348 RLEGTNVERGKEILNDSGLAIEPAATMAEGAQKI 381
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILNDSGLAIEPAATMAEGAQKIV 382
>gi|149238846|ref|XP_001525299.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Lodderomyces elongisporus NRRL YB-4239]
gi|146450792|gb|EDK45048.1| succinyl-CoA ligase beta-chain, mitochondrial precursor
[Lodderomyces elongisporus NRRL YB-4239]
Length = 313
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 209/339 (61%), Gaps = 33/339 (9%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+ HKLITKQT G V V + + + +E Y I+ DR P+++ S GG DIE
Sbjct: 1 MLNHKLITKQTGAAGKEVTAVYIVERRDADKEAYVAILMDRAKQTPMIVASSQGGMDIEG 60
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA K P +KT P+ + +L+QD ATE
Sbjct: 61 VAEKDPSAIKTFPVPLDA----NLSQD--------------KATE--------------- 87
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L F D +AA +Q L+ F+ D TQ+EINPL ET + +V+++DAK+ FDDNA
Sbjct: 88 IASVLGFSKDAIPEAAKTIQGLFKCFIERDCTQVEINPLSETPDHKVLAMDAKLGFDDNA 147
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FRQ+ ++S + ++ DP+E +A+KY LN++ +DGNI +VNGAGLAMATMDIIKL+GGE
Sbjct: 148 SFRQEEVYSWRDPTQEDPKEAEAAKYGLNFIKLDGNIANIVNGAGLAMATMDIIKLNGGE 207
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLD GG E+I +AF +I SD V I VN+FGGIV C +AKGL+ A K+F+L
Sbjct: 208 PANFLDCGGTATPETIEKAFELILSDKKVNGIFVNIFGGIVRCDYVAKGLIAATKNFQLE 267
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
IP+VVRL+GTN+ E K++++ES L L +LD AA +
Sbjct: 268 IPVVVRLQGTNMAEAKKLIEESGLKLFAFENLDSAAEKI 306
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A L+ A K+F+L IP+VVRL+GTN+ E K++++ES L L +LD AA +
Sbjct: 254 AKGLIAATKNFQLEIPVVVRLQGTNMAEAKKLIEESGLKLFAFENLDSAAEKIV 307
>gi|418637489|ref|ZP_13199809.1| succinate-CoA ligase, beta subunit [Staphylococcus lugdunensis
VCU139]
gi|374838997|gb|EHS02529.1| succinate-CoA ligase, beta subunit [Staphylococcus lugdunensis
VCU139]
Length = 388
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/394 (41%), Positives = 232/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AKEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAATT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T + EV+++DAKINFDDNA FR K
Sbjct: 185 -----------------YNVFVEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 348 RLEGTNVKRGKEILNDSGLAIEPAATMAEGAQKI 381
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVKRGKEILNDSGLAIEPAATMAEGAQKIV 382
>gi|260576571|ref|ZP_05844559.1| succinyl-CoA synthetase, beta subunit [Rhodobacter sp. SW2]
gi|259021175|gb|EEW24483.1| succinyl-CoA synthetase, beta subunit [Rhodobacter sp. SW2]
Length = 397
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/405 (40%), Positives = 235/405 (58%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEK 87
EDA+TA +++ +V+KAQI AGGRG G F + G K GV +V + +
Sbjct: 29 EDAKTAAG---EMDGPLWVVKAQIHAGGRGKGSFLEPEAGEKGGVRLARSVSEAAEFARQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T+QT G VN++ + +I RE Y ++ DR + + S GG IE+
Sbjct: 86 MLGRTLVTEQTGPAGKVVNRIYIEDGSDIARELYLALLIDRSTSRISFVASTEGGMSIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + T +D G+++ F G ++
Sbjct: 146 VAHATPEKILTFSVDPASGLSD-----------FHG----------------------RR 172
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
IA L G+ + V+ L+ F+ D LEINPL+ T ++ +D+K++FD NA
Sbjct: 173 IAFSLGLTGNSVKQCVALVKTLYKAFVEKDMDMLEINPLIVTPAGDLKCLDSKMSFDGNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
+R ++ + + +E DP+E+ ASK++LNY+ +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LYRHPDVAALRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAE 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG +E + +AF+II+SD VK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 293 PANFLDVGGGATKEKVTEAFKIITSDPKVKGILVNIFGGIMRCDVIAEGVLAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV+ GK I+ S L +I +L +AA +V A K
Sbjct: 353 VPLVVRLEGTNVELGKEIIRNSGLDVIAGDNLSDAAQKIVKAVKG 397
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK I+ S L +I +L +AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKEIIRNSGLDVIAGDNLSDAAQKIVKA 394
>gi|345019905|ref|ZP_08783518.1| succinyl-CoA synthetase subunit beta [Ornithinibacillus scapharcae
TW25]
Length = 388
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/375 (42%), Positives = 227/375 (60%), Gaps = 40/375 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV N+ ++ +++G L+T QT G V ++
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYANEILGKTLVTHQTGPEGKEVKRL 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ + +I +E Y +V DR + V++ S GGT+IE VAA+TP + ID G++
Sbjct: 97 LIEEGCDIKKEYYIGVVLDRATSRVVMMGSEEGGTEIEEVAAETPEKIFKEVIDPVVGLS 156
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
A+ +A + +L KA F++SL
Sbjct: 157 GYQARRLAFNMNIPDELLNKAVK--------FMTSL------------------------ 184
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
+ F+ D + EINPLV T + EV+++DAK+NFDDNA +RQK++ ++ E D +E+
Sbjct: 185 -YQAFIEKDCSIAEINPLVTTGDGEVLALDAKLNFDDNALYRQKDVLEYRDLDEEDEKEI 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASKY+L+YV +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFLDVGGG E + +AF+
Sbjct: 244 EASKYDLSYVALDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVGGGATAEKVTEAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV GK+IL+E
Sbjct: 304 IILSDKNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLNLPLVVRLEGTNVDLGKKILNE 363
Query: 409 SKLPLIFASDLDEAA 423
S L +I A + + A
Sbjct: 364 SGLNIIPADSMADGA 378
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV GK+IL+ES L +I A + + A +
Sbjct: 329 AEGVVEATKQVGLNLPLVVRLEGTNVDLGKKILNESGLNIIPADSMADGAEKIV 382
>gi|126726904|ref|ZP_01742743.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
HTCC2150]
gi|126703862|gb|EBA02956.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
HTCC2150]
Length = 397
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 157/370 (42%), Positives = 216/370 (58%), Gaps = 36/370 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F K GV + + ++ ++M+G+ L+TKQT G
Sbjct: 43 WVVKSQIHAGGRGKGKFTELAADAKGGVRVSFSAEEALANAKEMLGNTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR + S GG DIE VA TP L+ T+ I
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRETGQTSFVASTEGGMDIEAVAEDTPELIHTVGIKAS 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G T+ AD A+K+AD E G + + +
Sbjct: 163 TGCTD------AD---------------------------AEKLADAYELTGTAREQGMS 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ L+ F S D LEINPL+ T ++ +DAK++FD NA FR ++ +++E D
Sbjct: 190 LFKTLYEAFTSKDMALLEINPLIVTKSNDIQVLDAKVSFDGNALFRHPDLMEYRDITEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L Y+ +DG IGC+VNGAGLAMATMDII L+G PANFLDVGGG E +
Sbjct: 250 EKEIEASKYDLAYIALDGEIGCMVNGAGLAMATMDIINLYGASPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II+SD VK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGT VQEGK
Sbjct: 310 AAFKIITSDPKVKGILVNIFGGIMRCDVIAEGVVQAVKDVGLEVPLVVRLEGTKVQEGKD 369
Query: 405 ILDESKLPLI 414
I+++S L +I
Sbjct: 370 IINQSGLNVI 379
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGT VQEGK I+++S L +I
Sbjct: 339 AEGVVQAVKDVGLEVPLVVRLEGTKVQEGKDIINQSGLNVI 379
>gi|90421033|ref|ZP_01228936.1| succinyl-CoA synthetase, beta subunit [Aurantimonas manganoxydans
SI85-9A1]
gi|90334668|gb|EAS48445.1| succinyl-CoA synthetase, beta subunit [Aurantimonas manganoxydans
SI85-9A1]
Length = 396
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/369 (43%), Positives = 220/369 (59%), Gaps = 36/369 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+++ +M+G+ L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVEEVVQHATEMLGNTLVTAQTGDAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR + S GG DIE VA +TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRAVGRVAFVASTEGGMDIETVAHETPEKIITVAIDPL 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+TE+ A + D LE G +A T+ L+ +
Sbjct: 163 EGVTEADAGKLCDALELDG----QARTDGMSLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + + +DAK++FD NA FR +I + + SE D
Sbjct: 194 ----LYKAFTEKDMSLLEINPLIVMTDGRLRVLDAKVSFDGNALFRHDDIKALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++ +
Sbjct: 250 AKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGKEPANFLDVGGGADKAKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D VK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV +GK
Sbjct: 310 AAFKIITADPAVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVDKGKA 369
Query: 405 ILDESKLPL 413
IL++S L +
Sbjct: 370 ILNDSGLAI 378
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A +V A K L +PLVVRLEGTNV +GK IL++S L +
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDKGKAILNDSGLAI 378
>gi|347757423|ref|YP_004864985.1| succinyl-CoA ligase subunit beta [Micavibrio aeruginosavorus
ARL-13]
gi|347589941|gb|AEP08983.1| succinyl-CoA ligase [ADP-forming] subunit beta [Micavibrio
aeruginosavorus ARL-13]
Length = 400
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 173/386 (44%), Positives = 226/386 (58%), Gaps = 36/386 (9%)
Query: 48 YVIKAQILAGGRGLGHFDNG--FKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
YV+K+QI AGGRG G F N K GV V D+ E M+ L+TKQT G V
Sbjct: 43 YVVKSQIHAGGRGAGKFKNNPEGKGGVRLCKTVDDVKDAAEAMLHQVLVTKQTGPDGQKV 102
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
++ V V+I +E Y +V DR + ++S GG DIE VA P + ID
Sbjct: 103 QRLYVTDGVDIQKEYYCSVVLDRATSRVTFMVSTEGGMDIEEVAETHPEKIIRCAIDPVT 162
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+ A+ +A L GD A QK F+S
Sbjct: 163 GMQGFHARKLAFGLGLSGD----ALKSAQKF---FMS----------------------- 192
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
L+ F+ +D + +EINP++ TD+ EV+++DAK+NFDDNA FR +I + +E D
Sbjct: 193 ---LYKAFVDMDCSIVEINPMIVTDKNEVMALDAKLNFDDNALFRHPDIADLRDEAEEDE 249
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E A + L+YV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG E +
Sbjct: 250 NERLAKDWELSYVRLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATTERVTA 309
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+II SD NVK +LVN+FGGI+ C IA G++ A K LS+PLVVRLEGTNV++GK+I
Sbjct: 310 AFKIILSDPNVKGVLVNIFGGIMKCDIIANGIIAAAKEVSLSVPLVVRLEGTNVEQGKKI 369
Query: 406 LDESKLPLIFASDL-DEAASLVNACK 430
L ES LP+ A +L D A +V+A K
Sbjct: 370 LRESGLPITSADNLADAAQKVVDATK 395
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 430 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 478
K LS+PLVVRLEGTNV++GK+IL ES LP+ A +L D A +V+A K
Sbjct: 346 KEVSLSVPLVVRLEGTNVEQGKKILRESGLPITSADNLADAAQKVVDATK 395
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
K LS+PLVVRLEGTNV++GK+IL ES LP+ A +L +AA + A
Sbjct: 346 KEVSLSVPLVVRLEGTNVEQGKKILRESGLPITSADNLADAAQKVVDA 393
>gi|209879644|ref|XP_002141262.1| succinyl-CoA synthetase, beta subunit [Cryptosporidium muris RN66]
gi|209556868|gb|EEA06913.1| succinyl-CoA synthetase, beta subunit, putative [Cryptosporidium
muris RN66]
Length = 472
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/395 (40%), Positives = 239/395 (60%), Gaps = 23/395 (5%)
Query: 49 VIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
VIKAQ+L GGRGLG+F +N F+ GV N+ + I EKM+G LITKQT G K
Sbjct: 76 VIKAQVLTGGRGLGYFKENNFQGGVQECKNLDQLIDISEKMLGKTLITKQTGLEGKICKK 135
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V++ + + I +E Y I DR +I P GGT IE+ A + P+ + I ID +G+
Sbjct: 136 VLIVEKIPILKEMYLAIALDRESASTCIIFCPEGGTSIEDKAKENPNNIHKICIDPKEGL 195
Query: 168 TESLAQDIADFL--EFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD----LKAK 221
T + I++ L E+ G++K + NL ++ K D + F+ + LK +
Sbjct: 196 TRDITNKISNILLGEYFGNIKDMKS---DNFLNLNINKKNLKYFDKI-FKMNEVEMLKNE 251
Query: 222 AATEVQKLWNLFLSVDATQLEINPLV---------ETDE-REVISVDAKINFDDNAEFRQ 271
V KL+ LF D+T +E+NPLV + D + ++ D KIN DDNA +RQ
Sbjct: 252 MYEIVNKLYQLFRETDSTLIEVNPLVLKKNIPKLRDNDSIKNLLICDIKINIDDNASYRQ 311
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
K +F +V + D EV+A+KY LNY+ ++GN+GC+VNGAGLAMATMDIIK + EPANF
Sbjct: 312 KELFDIEDVEQKDQIEVEAAKYGLNYIRLNGNVGCIVNGAGLAMATMDIIKFYNAEPANF 371
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LD+GG +E + +A I+ +D+NVK I+VNVF GIV +A+G++ A ++ + P+V
Sbjct: 372 LDLGGTAQKEQVCKALEILHNDNNVKVIMVNVFAGIVRADVVAEGIIEAVETLNIKKPIV 431
Query: 392 VRLEGTNVQEGKRILDESK--LPLIFASDLDEAAS 424
VRL+GTN+++ K ++D+ K + + F +DLD A
Sbjct: 432 VRLQGTNIEQAKVLMDKKKDSINITFCTDLDSTAK 466
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESK--LPLIFASDLDEAA 519
A ++ A ++ + P+VVRL+GTN+++ K ++D+ K + + F +DLD A
Sbjct: 414 AEGIIEAVETLNIKKPIVVRLQGTNIEQAKVLMDKKKDSINITFCTDLDSTA 465
>gi|375008179|ref|YP_004981812.1| succinyl-CoA ligase [ADP-forming] subunit beta [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359287028|gb|AEV18712.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 386
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 230/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV +++++ +++G L+T
Sbjct: 31 AVEAAKELGAPVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASELLGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A+++A +
Sbjct: 144 IFKEYIDPAVGLQA-----------FQ----------------------ARRLAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L +A + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R ++
Sbjct: 171 KHLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDVL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +EE + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGASEEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVAATKQVGLTLPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL ES L +I A + + A
Sbjct: 351 GTNVELGKKILQESGLNIIAAESMADGA 378
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K L++PLVVRLEGTNV+ GK+IL ES L +I A + + A +
Sbjct: 329 ASGIVAATKQVGLTLPLVVRLEGTNVELGKKILQESGLNIIAAESMADGAQKIV 382
>gi|374288870|ref|YP_005035955.1| succinyl-CoA synthetase beta chain (SCS-beta) [Bacteriovorax
marinus SJ]
gi|301167411|emb|CBW26993.1| succinyl-CoA synthetase beta chain (SCS-beta) [Bacteriovorax
marinus SJ]
Length = 390
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/374 (43%), Positives = 219/374 (58%), Gaps = 39/374 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K L +V+KAQI AGGRG GV N+ ++ + ++G L+T QT
Sbjct: 36 KKLGGNVWVVKAQIHAGGRGKA-------GGVKLAKNLDEVKAHADDILGKTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++V + I E Y IV DR + S GG +IE VA +TP + +
Sbjct: 89 EGKKVLTLLVEEGCEIEHEYYAGIVLDRATGKITFMASSEGGVEIEKVAEETPEKIIKVA 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D G T + + +A + + K AT+ F+G
Sbjct: 149 VDPAAGFTPFIGRKLAYGIGIKDKDLVKEATKF--------------------FKG---- 184
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
L++L++ D T EINPLV+T + E+I++DAK+NFDDNA FR I +
Sbjct: 185 --------LYDLYVDTDCTIAEINPLVKTKQGEIIALDAKLNFDDNALFRHPEIEEMRDP 236
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E E+DA+KY L+Y+ +DGNIGCLVNGAGLAM TMDIIKLHGGEPANFLDVGGG +
Sbjct: 237 TEESAEELDAAKYGLSYISLDGNIGCLVNGAGLAMGTMDIIKLHGGEPANFLDVGGGATK 296
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E++ +AF II SDSNVK ILVN+FGGI+ C IA+G+V A KS +++PLVVRLEGTNV
Sbjct: 297 ETVEKAFSIILSDSNVKAILVNIFGGIMKCDIIAEGVVAAAKSLGVTVPLVVRLEGTNVA 356
Query: 401 EGKRILDESKLPLI 414
GK+IL+ES L +I
Sbjct: 357 LGKKILNESDLTII 370
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A KS +++PLVVRLEGTNV GK+IL+ES L +I
Sbjct: 330 AEGVVAAAKSLGVTVPLVVRLEGTNVALGKKILNESDLTII 370
>gi|254445276|ref|ZP_05058752.1| succinyl-CoA synthetase, beta subunit subfamily [Verrucomicrobiae
bacterium DG1235]
gi|198259584|gb|EDY83892.1| succinyl-CoA synthetase, beta subunit subfamily [Verrucomicrobiae
bacterium DG1235]
Length = 438
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 223/376 (59%), Gaps = 35/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QI AGGRG G F +GFK GV ++ KM+G+ L+T QT + G V V
Sbjct: 89 VVKSQIHAGGRGKGTFTDGFKGGVKLAKTKEEAIEYANKMLGNTLVTIQTGEAGRKVQTV 148
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+ +I +E Y ++ DR + PVV+ S GG DIE VA +TP + + +D G
Sbjct: 149 YFTEGADIEKEYYLAVLLDRATSRPVVVASTEGGMDIETVAEETPDKIFKVFVDPAYG-- 206
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKL-WNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
+ADF ++++L L L+ + K AA ++
Sbjct: 207 ------LADF-------------QLRELVTKLGLNKVESK-------------NAAKLIR 234
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ +F DA +E+NPL+ T EV+++DAK++FD NA +R I + +++E DP+E
Sbjct: 235 NLYTMFCEKDADMIEVNPLITTSTGEVLALDAKVSFDSNALYRHPEIVALRDLNEEDPKE 294
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK+ L+Y+ +DG I CLVNGAGLAM+TMDIIK +GG PANFLDVGGG +E ++ AF
Sbjct: 295 IEASKFGLSYIALDGTIACLVNGAGLAMSTMDIIKHYGGSPANFLDVGGGATKEQVVAAF 354
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II D NVK I VN+FGGI++C IA G+V A K L +PLVVRLEG NV+ GK L
Sbjct: 355 KIILGDPNVKGIFVNIFGGIMDCDVIANGIVEAVKEVGLKLPLVVRLEGNNVKAGKATLA 414
Query: 408 ESKLPLIFASDLDEAA 423
S L ++ + +AA
Sbjct: 415 GSGLTIVSGDSMADAA 430
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEG NV+ GK L S L ++ + +AA +
Sbjct: 381 ANGIVEAVKEVGLKLPLVVRLEGNNVKAGKATLAGSGLTIVSGDSMADAAQKIV 434
>gi|56419743|ref|YP_147061.1| succinyl-CoA synthetase subunit beta [Geobacillus kaustophilus
HTA426]
gi|261419408|ref|YP_003253090.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y412MC61]
gi|297530617|ref|YP_003671892.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. C56-T3]
gi|319766223|ref|YP_004131724.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y412MC52]
gi|448237364|ref|YP_007401422.1| succinyl-CoA ligase subunit beta [Geobacillus sp. GHH01]
gi|81347630|sp|Q5L0N7.1|SUCC_GEOKA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|56379585|dbj|BAD75493.1| succinyl-CoA synthetase beta subunit (succinate-CoA ligase beta
subunit) [Geobacillus kaustophilus HTA426]
gi|261375865|gb|ACX78608.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y412MC61]
gi|297253869|gb|ADI27315.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. C56-T3]
gi|317111089|gb|ADU93581.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y412MC52]
gi|445206206|gb|AGE21671.1| succinyl-CoA ligase subunit beta [Geobacillus sp. GHH01]
Length = 386
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 230/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV +++++ +++G L+T
Sbjct: 31 AVEAAKELGAPVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASELLGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A+++A +
Sbjct: 144 IFKEYIDPAVGLQA-----------FQ----------------------ARRLAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L +A + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R +I
Sbjct: 171 KHLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +EE + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGASEEKVREAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVAATKQVGLTLPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL ES L +I A + + A
Sbjct: 351 GTNVELGKKILQESGLNIIAAESMADGA 378
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K L++PLVVRLEGTNV+ GK+IL ES L +I A + + A +
Sbjct: 329 ASGIVAATKQVGLTLPLVVRLEGTNVELGKKILQESGLNIIAAESMADGAQKIV 382
>gi|149177237|ref|ZP_01855843.1| succinyl-CoA synthetase (beta subunit) [Planctomyces maris DSM
8797]
gi|148843951|gb|EDL58308.1| succinyl-CoA synthetase (beta subunit) [Planctomyces maris DSM
8797]
Length = 395
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 161/384 (41%), Positives = 229/384 (59%), Gaps = 34/384 (8%)
Query: 49 VIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
V+K+QI AGGRG G F + ++GV + +++ E+M+G L+T QT + G VN
Sbjct: 44 VVKSQIHAGGRGKGRFKEYPEQAGVVLARSAEEVRENAERMLGSTLVTIQTGEEGKQVNT 103
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+ + + ++I +E Y V DR GPV+I+S GG +IE VA ++P + + P +H G+
Sbjct: 104 LFIEQGLDIAQELYLGCVVDREAGGPVLILSTEGGMEIEVVAEESPEKILSEPFSIHTGL 163
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
L FQ A+K+A L G A +
Sbjct: 164 -----------LGFQ----------------------ARKLAFKLGMEGKTVRSAEKFLC 190
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
++ F+ D + EINPLV T E E++++DAK++FD+NA FR K + +++E +P E
Sbjct: 191 QMSRFFIDNDCSMTEINPLVITGEGELVALDAKVSFDENAMFRHKPLEELRDLTEEEPAE 250
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
VDA L+YV +DGNIGCLVNGAGLAM+TMD+IK HGGEPANFLDVGGG N + + +AF
Sbjct: 251 VDAGNAGLSYVKLDGNIGCLVNGAGLAMSTMDLIKHHGGEPANFLDVGGGANVDQVSEAF 310
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
RII +D NVK +LVN+FGGI+ C TI L+ A + ++PLVVRLEGTNV + + +L
Sbjct: 311 RIILADDNVKAVLVNIFGGIMKCDTIVTALLEAYEKVGFTVPLVVRLEGTNVDKAREMLA 370
Query: 408 ESKLPLIFASDLDEAASLVNACKS 431
S +I A+DL +AA V A S
Sbjct: 371 GSGRDIISATDLTDAAQKVVATLS 394
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 472 SLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
+L+ A + ++PLVVRLEGTNV + + +L S +I A+DL +AA +
Sbjct: 339 ALLEAYEKVGFTVPLVVRLEGTNVDKAREMLAGSGRDIISATDLTDAAQKVV 390
>gi|419768126|ref|ZP_14294263.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
aureus IS-250]
gi|383361047|gb|EID38430.1| succinate-CoA ligase, beta subunit [Staphylococcus aureus subsp.
aureus IS-250]
Length = 385
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 231/391 (59%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA+T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA +N+ +
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIA--------------------FNINIPK--------- 171
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 172 ----ESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV+ GK IL+ES L + A+ + E A
Sbjct: 348 RLEGTNVERGKAILNESGLAIEPAATMAEGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKAILNESGLAIEPAATMAEGAQ 379
>gi|110638636|ref|YP_678845.1| succinyl-CoA synthetase subunit beta [Cytophaga hutchinsonii ATCC
33406]
gi|110281317|gb|ABG59503.1| succinate--CoA ligase, ADP-forming (succinyl-CoA synthetase, beta
subunit) [Cytophaga hutchinsonii ATCC 33406]
Length = 403
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 245/429 (57%), Gaps = 50/429 (11%)
Query: 5 FNQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF 64
+N +I Y P S V + K+ +T T+I +V+KAQI AGGRG G F
Sbjct: 15 YNVKIGEGIYADSPESAVEAAKKL---KEQTGTDI--------FVVKAQIHAGGRGKGKF 63
Query: 65 DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVA-----KSVNITRE 119
GV + ++ +M+G+ L+T QT +G V++++VA K + +E
Sbjct: 64 VGTEHRGVMIAKSYDEVKEKAAQMLGNTLVTIQTGPSGKVVSRLLVAADVYQKGASEPKE 123
Query: 120 TYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFL 179
Y ++ DR V+I S GG DIE VA TPHL IT+
Sbjct: 124 LYLSMLLDRGTGQDVIIASTEGGMDIEEVAHSTPHL-----------ITKEFVDPAVGLQ 172
Query: 180 EFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDAT 239
FQ A+KIA L G + T V +L+ + + +A
Sbjct: 173 GFQ----------------------ARKIAFGLGLSGTAFKEMVTFVTRLYTAYKATNAE 210
Query: 240 QLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVG 299
+EINP+++T + E+++VDAK++ DDNA FR ++ + +V+E DP EV+A++ +LNYV
Sbjct: 211 MIEINPVLKTSKDEILAVDAKVSIDDNALFRHPDLAAYRDVTEEDPLEVEAAESHLNYVK 270
Query: 300 MDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCI 359
+DGN+GC+VNGAGLAMATMD+IKL GGEPANFLDVGGG N +++ FRII D NVK I
Sbjct: 271 LDGNVGCMVNGAGLAMATMDVIKLAGGEPANFLDVGGGANAKTVEAGFRIILKDPNVKAI 330
Query: 360 LVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASD 418
L+NVFGGIV C +A G+V A K+ ++IP++VRL+GTN +EG +I++ES L + A
Sbjct: 331 LINVFGGIVRCDRVANGVVEAYKNIGTINIPIIVRLQGTNAEEGAKIINESGLKVRSAVI 390
Query: 419 LDEAASLVN 427
L +AA LV
Sbjct: 391 LKDAAKLVT 399
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K+ ++IP++VRL+GTN +EG +I++ES L + A L +AA
Sbjct: 345 ANGVVEAYKNIGTINIPIIVRLQGTNAEEGAKIINESGLKVRSAVILKDAA 395
>gi|152976202|ref|YP_001375719.1| succinyl-CoA synthetase subunit beta [Bacillus cytotoxicus NVH
391-98]
gi|189046883|sp|A7GRG6.1|SUCC_BACCN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|152024954|gb|ABS22724.1| succinyl-CoA synthetase, beta subunit [Bacillus cytotoxicus NVH
391-98]
Length = 386
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 162/389 (41%), Positives = 229/389 (58%), Gaps = 40/389 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAENILGSTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFHINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRVFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAAS 424
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGAQ 379
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVVEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|335040237|ref|ZP_08533370.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Caldalkalibacillus
thermarum TA2.A1]
gi|334179905|gb|EGL82537.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Caldalkalibacillus
thermarum TA2.A1]
Length = 386
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 223/375 (59%), Gaps = 40/375 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV ++ ++ +++G L+T QT G V ++
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKVARSLDEVRTYASELLGKVLVTHQTGPEGKEVKRL 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+ + NI E Y +V DR V++ S GGT+IE VAAKTP + T ID G+
Sbjct: 97 WIEQGCNIENEYYIGVVVDRSTGRVVIMASEEGGTEIEEVAAKTPEKIFTEVIDPAVGL- 155
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
+ FQ A+K+A + +L KA +
Sbjct: 156 ----------MPFQ----------------------ARKLAYAINIPKNLVNKAVKFMLG 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+ F+ D + EINPLV T E +V+++DAK+NFD NA FR +I ++SE D +E+
Sbjct: 184 LYQAFVDKDCSMAEINPLVTTKEGDVLALDAKLNFDSNALFRHPDIVELRDLSEEDEKEI 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVGGG + E + +AF+
Sbjct: 244 EASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVGGGASTEKVTEAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD VK I VN+FGGI+ C IA G+V A K L++PLVVRLEGTNV+ GK+IL+E
Sbjct: 304 IILSDPKVKGIFVNIFGGIMKCDVIANGIVEAAKQVGLNVPLVVRLEGTNVELGKQILNE 363
Query: 409 SKLPLIFASDLDEAA 423
S L +I A + + A
Sbjct: 364 SGLNIIAAESMADGA 378
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL+ES L +I A + + A +
Sbjct: 329 ANGIVEAAKQVGLNVPLVVRLEGTNVELGKQILNESGLNIIAAESMADGAQKIV 382
>gi|315497282|ref|YP_004086086.1| succinyl-CoA synthetase subunit beta [Asticcacaulis excentricus CB
48]
gi|315415294|gb|ADU11935.1| succinyl-CoA synthetase, beta subunit [Asticcacaulis excentricus CB
48]
Length = 425
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 232/387 (59%), Gaps = 36/387 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
++A A LKD + K +V+K+QI AGGRG G F+ K GV + D+ ++
Sbjct: 54 KEALEAAKNLKDDSTKVWVVKSQIHAGGRGKGRFEGLGPDAKGGVRVVKSPADVEANADE 113
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + + +I +E Y ++ DR+ + V+ S GG DIE
Sbjct: 114 MLGRVLVTHQTGPAGKQVNRLYIEEGADIKKELYLSLLVDRVSSRISVVASTEGGMDIEE 173
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + + ID G+ + +A L +GDL A + KL
Sbjct: 174 VAHSTPEKIHSFTIDPATGVFPVHGRTLAHALGLKGDL----AKQGFKL----------- 218
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+Q+L+ F + D LEINPL+ T + +++ +DAK++FD N+
Sbjct: 219 ------------------LQQLYAAFNAKDMDMLEINPLIITGDDQLLVLDAKVSFDSNS 260
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FR +I + ++SE D +E++ASK++L+Y+ +DG IGC+VNGAGLAMAT+DIIKL+G E
Sbjct: 261 LFRHPDIQALRDLSEEDAKEIEASKFDLSYIALDGEIGCMVNGAGLAMATLDIIKLYGSE 320
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG E + AF+II+SD VK ILVN+FGGI+ C IA G++ A K L
Sbjct: 321 PANFLDVGGGATTEKVTAAFKIITSDPKVKGILVNIFGGIMKCDIIATGVIAAVKEVGLK 380
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLI 414
+PLVVRLEGTNV+ GK+I++ES L +I
Sbjct: 381 VPLVVRLEGTNVELGKKIINESGLNVI 407
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I
Sbjct: 367 ATGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVI 407
>gi|329847465|ref|ZP_08262493.1| succinyl-CoA ligase ADP-forming subunit beta [Asticcacaulis
biprosthecum C19]
gi|328842528|gb|EGF92097.1| succinyl-CoA ligase ADP-forming subunit beta [Asticcacaulis
biprosthecum C19]
Length = 401
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 227/387 (58%), Gaps = 36/387 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
E + A + K+ K +V+K+QI AGGRG G F+ K GV D+ ++
Sbjct: 30 EAKKAAETLAKEAGSKVFVVKSQIHAGGRGKGRFEGLGPDAKGGVRVVKTPDDVKSNADE 89
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + + +I +E Y ++ DR+ + V+ S GG IE+
Sbjct: 90 MLGRVLVTIQTGPAGKQVNRLYIEEGADIAKELYLSLLVDRVSSKVSVVASTEGGMSIED 149
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + + ID G+ W +LAQ
Sbjct: 150 VAHDTPEKIHSFTIDPATGV-----------------------------WPTHARALAQA 180
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
L +GDL + A + +L+ F + D LEINPL+ T + +++ +DAK +FD NA
Sbjct: 181 ----LNLKGDLAKQGAKLLSQLYAAFTAKDMDMLEINPLIVTGDDKLLVLDAKCSFDSNA 236
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FR ++ +V+E D +E++ASKY+L+Y+ +DG IGC+VNGAGLAMAT+DIIKL+G E
Sbjct: 237 LFRHPDMVELRDVTEEDEKEIEASKYDLSYIALDGEIGCMVNGAGLAMATLDIIKLYGSE 296
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG E + AF+II+SD VK ILVN+FGGI+ C IA+G++ A K L
Sbjct: 297 PANFLDVGGGATTEKVTAAFKIITSDPKVKGILVNIFGGIMKCDIIAQGVIVAVKEVGLK 356
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLI 414
+PLVVRLEGTNV+ GK+IL+ES L +I
Sbjct: 357 VPLVVRLEGTNVELGKKILNESGLNVI 383
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L +I
Sbjct: 343 AQGVIVAVKEVGLKVPLVVRLEGTNVELGKKILNESGLNVI 383
>gi|415886558|ref|ZP_11548338.1| succinyl-CoA synthetase subunit beta [Bacillus methanolicus MGA3]
gi|387587245|gb|EIJ79568.1| succinyl-CoA synthetase subunit beta [Bacillus methanolicus MGA3]
Length = 385
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 233/388 (60%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV +++++ +++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASEILGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRAKSRVVLMASEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+T A+ IA +N+ + + + F++F
Sbjct: 144 IFKEEIDPVVGLTAFQARRIA--------------------FNINIPK--ELVNQFVKF- 180
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ L+ ++ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 181 ----------MMGLYQAYIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDI+K +GGEPANFLDVG
Sbjct: 231 ELRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + E + +AF+II SD VK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGASAEKVTEAFKIILSDPKVKGIFVNIFGGIMKCDVIATGVVEAAKQVGLNVPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L +I A + + A
Sbjct: 351 GTNVELGKKILNESGLNIIAAESMADGA 378
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL+ES L +I A + + A +
Sbjct: 329 ATGVVEAAKQVGLNVPLVVRLEGTNVELGKKILNESGLNIIAAESMADGAQKIV 382
>gi|23098998|ref|NP_692464.1| succinyl-CoA synthetase subunit beta [Oceanobacillus iheyensis
HTE831]
gi|22777226|dbj|BAC13499.1| succinyl-CoA synthetase beta subunit [Oceanobacillus iheyensis
HTE831]
Length = 386
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 165/383 (43%), Positives = 228/383 (59%), Gaps = 41/383 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV ++ ++ ++++G L+T QT G V ++
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKVAKSLDEVRTYADEILGKTLVTHQTGPEGKEVKRL 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ + +I +E Y +V DR + V++ S GGT+IE VA TP + ID G+T
Sbjct: 97 LIEEGCDIQKEYYVGVVLDRATSRVVMMASEEGGTEIEEVAEATPEKIFKEVIDPVVGLT 156
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
FQ A+++A + DL KA +
Sbjct: 157 P-----------FQ----------------------ARRLAFNINIPEDLLGKAVKFMSG 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L++ F++ D + EINPLV T + EV+++DAK+NFDDNA +R K+I + E D +E+
Sbjct: 184 LYDAFVAKDCSIAEINPLVTTGDGEVLALDAKLNFDDNALYRHKDIQDLRDFEEEDEKEI 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
ASKY+L+YV +DGNIGC+VNGAGLAM+TMDIIK +GG+PANFLDVGGG E + +AF+
Sbjct: 244 QASKYDLSYVSLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVGGGATAEKVTEAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NVK I VN+FGGI+ C IA+G+V A K L IPLVVRLEGTNV GK+ILDE
Sbjct: 304 IILSDKNVKGIFVNIFGGIMKCDVIAEGVVEATKQIGLEIPLVVRLEGTNVDAGKKILDE 363
Query: 409 SKLPLIFASDL-DEAASLVNACK 430
S L + A+ + D A +V A K
Sbjct: 364 SGLNITTATSMADGAEKIVAAVK 386
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L IPLVVRLEGTNV GK+ILDES L + A+ + + A + A
Sbjct: 329 AEGVVEATKQIGLEIPLVVRLEGTNVDAGKKILDESGLNITTATSMADGAEKIVAA 384
>gi|190571356|ref|YP_001975714.1| succinyl-CoA synthetase subunit beta [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|213018752|ref|ZP_03334560.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|226734997|sp|B3CME9.1|SUCC_WOLPP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|190357628|emb|CAQ55069.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|212995703|gb|EEB56343.1| succinyl-CoA synthase, beta subunit [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 386
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 224/376 (59%), Gaps = 40/376 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+V+KAQI AGGRG GV +V++ ++ M+G L+T QT +G V +
Sbjct: 43 FVVKAQIHAGGRGKA-------GGVKLAKSVEEAQQFVKNMLGITLVTHQTGPSGQQVRR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+ + + +I +E Y +V D + V I S GG DIE VA +P + ID G
Sbjct: 96 IYIEEGSSIKKEYYLSLVVDPKLSRLVFIFSSEGGMDIEEVAKNSPTKIVKFDIDPATGF 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
T +A+ + +++++ N+ +
Sbjct: 156 TNLDNSKLANNFNLNSE-------QIERITNI--------------------------AK 182
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
+++ F++ DA+Q+EINPLVET+ + +++DAKINFDDNA +R I + E E
Sbjct: 183 NIYDAFITTDASQIEINPLVETNSGDFVALDAKINFDDNALYRHPEIVQLRDYDEEVKEE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK+ L+Y+ MDGNIGC+VNGAGLAMATMDIIK +G EPANFLDVGGG ++E++ +AF
Sbjct: 243 IEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPANFLDVGGGASKETVTEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II SDSNVK ILVN+FGGI+ C IA G+V A K + +PLVVRL GTN +EGK+IL+
Sbjct: 303 KIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPLVVRLSGTNFEEGKKILE 362
Query: 408 ESKLPLIFASDLDEAA 423
ES L +I A +L +AA
Sbjct: 363 ESGLNIIAADELGDAA 378
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN +EGK+IL+ES L +I A +L +AA +
Sbjct: 329 ASGIVAAAKEMSIKVPLVVRLSGTNFEEGKKILEESGLNIIAADELGDAAQKIV 382
>gi|418411666|ref|ZP_12984932.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
epidermidis BVS058A4]
gi|420167603|ref|ZP_14674255.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM087]
gi|394237631|gb|EJD83117.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM087]
gi|410891249|gb|EKS39046.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
epidermidis BVS058A4]
Length = 388
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 229/384 (59%), Gaps = 40/384 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+LN YV+KAQI AGGRG GV ++ ++ +++G +L+T QT
Sbjct: 36 KELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA+TP +
Sbjct: 89 EGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKET 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID G++ A+ IA +N+ + +
Sbjct: 149 IDPVVGLSPYQARRIA--------------------FNINIPK-------------ESVG 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
KA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K+I ++
Sbjct: 176 KATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDILELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFLDVGGG +
Sbjct: 236 EEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVGGGATK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVVRLEGTNV+
Sbjct: 296 EKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLEGTNVE 355
Query: 401 EGKRILDESKLPLIFASDLDEAAS 424
GK IL+ES L + A+ + E A
Sbjct: 356 RGKAILNESGLAIEPAATMAEGAQ 379
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKAILNESGLAIEPAATMAEGAQKIV 382
>gi|239636275|ref|ZP_04677277.1| succinyl-CoA synthetase beta chain [Staphylococcus warneri L37603]
gi|239597630|gb|EEQ80125.1| succinyl-CoA synthetase beta chain [Staphylococcus warneri L37603]
Length = 388
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 232/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELDSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIMELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D +VK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDEHVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL++S L + AS + E A +
Sbjct: 348 RLEGTNVERGKEILNDSGLAIEPASTMAEGAQKI 381
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL++S L + AS + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILNDSGLAIEPASTMAEGAQKIV 382
>gi|433446044|ref|ZP_20410175.1| succinyl-CoA ligase [ADP-forming] subunit beta [Anoxybacillus
flavithermus TNO-09.006]
gi|432000789|gb|ELK21681.1| succinyl-CoA ligase [ADP-forming] subunit beta [Anoxybacillus
flavithermus TNO-09.006]
Length = 386
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 230/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV +++++ +++G L+T
Sbjct: 31 AVEAAKELGSSVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASELLGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A+++A +
Sbjct: 144 IFKEYIDPAVGLQA-----------FQ----------------------ARRMAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVNQAVKFMLGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 231 EYRDLDEEDPKEIEASKYDLNYISLDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGATTEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIANGIVEATKQVGLNLPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L + A + + A
Sbjct: 351 GTNVELGKKILEESGLNITAAESMADGA 378
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL+ES L + A + + A +
Sbjct: 329 ANGIVEATKQVGLNLPLVVRLEGTNVELGKKILEESGLNITAAESMADGAQKIV 382
>gi|433462624|ref|ZP_20420201.1| succinyl-CoA synthetase subunit beta [Halobacillus sp. BAB-2008]
gi|432188572|gb|ELK45753.1| succinyl-CoA synthetase subunit beta [Halobacillus sp. BAB-2008]
Length = 386
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/375 (42%), Positives = 224/375 (59%), Gaps = 40/375 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV N+ ++ E+++G L+T QT G V ++
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKIAKNLDEVRTYAEEILGSTLVTHQTGPEGKEVKRL 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ + +I E Y +V DR + ++ S GGT+IE VA TP + +D G+T
Sbjct: 97 LIEEGCDIQSEYYIGLVLDRATSKVTMMASEEGGTEIEEVAEATPEKIFKEVVDPVTGLT 156
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
A+ +A FQ ++ +A KA +
Sbjct: 157 PFQARRLA----FQINIPKEAV-----------------------------GKAVKFMLG 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+++F+ D + EINPLV T + +VI++D+K+NFDDNA FRQK+I ++ E DP+EV
Sbjct: 184 LYDVFVQKDCSVAEINPLVTTGDGDVIALDSKLNFDDNALFRQKDIAELRDLDEEDPKEV 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASKY+L+Y+ +DGNIGC+VNGAGLAMATMD IK + G+PANFLDVGGG E + +AF+
Sbjct: 244 EASKYDLSYIALDGNIGCMVNGAGLAMATMDTIKHYSGDPANFLDVGGGATAEKVTEAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV GK+IL+E
Sbjct: 304 IILSDENVKGIFVNIFGGIMKCDVIAQGVVEATKQIGLTLPLVVRLEGTNVDAGKKILEE 363
Query: 409 SKLPLIFASDLDEAA 423
S L + A + E A
Sbjct: 364 SGLNITSADSMAEGA 378
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV GK+IL+ES L + A + E A +
Sbjct: 329 AQGVVEATKQIGLTLPLVVRLEGTNVDAGKKILEESGLNITSADSMAEGAQKIV 382
>gi|399047126|ref|ZP_10739258.1| succinyl-CoA synthetase, beta subunit [Brevibacillus sp. CF112]
gi|433546068|ref|ZP_20502406.1| succinyl-CoA synthetase subunit beta [Brevibacillus agri BAB-2500]
gi|398054959|gb|EJL47057.1| succinyl-CoA synthetase, beta subunit [Brevibacillus sp. CF112]
gi|432182684|gb|ELK40247.1| succinyl-CoA synthetase subunit beta [Brevibacillus agri BAB-2500]
Length = 386
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N+ ++ +++G L+T
Sbjct: 31 AVEAAKELGTQVVVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYASEILGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR V++ S GGT+IE VAA+TP
Sbjct: 84 HQTGPEGKEVKRLLIEQGCDIKKEYYVGVVVDRATGSVVMMASEEGGTEIEEVAAQTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A+++A +
Sbjct: 144 IFKEVIDPVTGLNA-----------FQ----------------------ARRLAYAINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L KAA + L+ F+ D + EINPLV T + EV+++DAK+NFD NA +R +I
Sbjct: 171 KELINKAAKFMMSLYQAFVEKDCSIAEINPLVVTGDGEVMALDAKLNFDSNALYRHPDIV 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ E D +E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDI+K +GG+PANFLDVG
Sbjct: 231 ALRDLDEEDEKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIVKFYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG EE + +AF+II D VK I VN+FGGI+ C IA G+VNA K KL PLVVRLE
Sbjct: 291 GGATEEKVTEAFKIILRDEKVKGIFVNIFGGIMKCDVIANGVVNAAKQIKLDKPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVDLGKKILNESGLNIVAAESMADGA 378
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +VNA K KL PLVVRLEGTNV GK+IL+ES L ++ A + + A +
Sbjct: 329 ANGVVNAAKQIKLDKPLVVRLEGTNVDLGKKILNESGLNIVAAESMADGAEKIV 382
>gi|114769504|ref|ZP_01447130.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
HTCC2255]
gi|114550421|gb|EAU53302.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
HTCC2255]
Length = 399
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/403 (40%), Positives = 232/403 (57%), Gaps = 42/403 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
+++ +++IKAQ+ AGGRG GV +N +I M+G KL+T QT
Sbjct: 36 REMGGNKWIIKAQVHAGGRGKA-------GGVKVCSNDNEIIEAASSMLGRKLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G + ++ V V I RE Y V DR +++ S GG +IE ++A P +
Sbjct: 89 EGKGIYRLYVEAGVPIDREIYLGFVLDRTTQRIMIVASSEGGMEIEEISANRPESIVRAS 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID G+ E A++IA FQ ++ SL Q++ L
Sbjct: 149 IDPAVGLVEFQAREIA----FQLGIE---------------PSLTQQMVRTL-------- 181
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+N F +DAT +EINPLV T + +VI++DAK+ FDDNA FR I +
Sbjct: 182 ------MGCFNAFQDLDATMVEINPLVVTTDHQVIALDAKMTFDDNALFRHPKISELRDK 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
S+ DPRE +A+ L+YVG+DGNIGC+VNGAGLAMATMD IKL GGEPANFLD+GGG
Sbjct: 236 SQEDPRESNAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLSGGEPANFLDIGGGATP 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + +AFR++ SD V+ ILVN+F GI C +A+G+V A K ++IP++VRL GTNV+
Sbjct: 296 ERVSKAFRLVRSDKKVEAILVNIFAGINRCDWVAEGVVQALKDDPINIPVIVRLSGTNVE 355
Query: 401 EGKRILDESKLPLIFASDLDEAASLVNACKSFKLSIPLVVRLE 443
EG+RIL +S LP+I A+ L EAA A ++K P + +L+
Sbjct: 356 EGQRILAKSGLPIIRAATLKEAAD--RAVSAWKADKPTITKLK 396
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K ++IP++VRL GTNV+EG+RIL +S LP+I A+ L EAA+ + A
Sbjct: 329 AEGVVQALKDDPINIPVIVRLSGTNVEEGQRILAKSGLPIIRAATLKEAADRAVSA 384
>gi|293366789|ref|ZP_06613465.1| succinyl-CoA synthase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417658995|ref|ZP_12308608.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU045]
gi|417909778|ref|ZP_12553511.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU037]
gi|418616682|ref|ZP_13179606.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU120]
gi|420182916|ref|ZP_14689049.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM049]
gi|420194016|ref|ZP_14699845.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM021]
gi|420197138|ref|ZP_14702862.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM020]
gi|420214274|ref|ZP_14719553.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH05005]
gi|420216104|ref|ZP_14721326.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH05001]
gi|420221962|ref|ZP_14726887.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH08001]
gi|420224825|ref|ZP_14729663.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH06004]
gi|420227037|ref|ZP_14731810.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH05003]
gi|420229360|ref|ZP_14734066.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH04003]
gi|291319090|gb|EFE59460.1| succinyl-CoA synthase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329736634|gb|EGG72900.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU045]
gi|341652387|gb|EGS76175.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU037]
gi|374820760|gb|EHR84836.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU120]
gi|394249379|gb|EJD94592.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM049]
gi|394265945|gb|EJE10591.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM020]
gi|394266714|gb|EJE11339.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM021]
gi|394283639|gb|EJE27804.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH05005]
gi|394289993|gb|EJE33863.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH08001]
gi|394292554|gb|EJE36296.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH05001]
gi|394294228|gb|EJE37914.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH06004]
gi|394297538|gb|EJE41135.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH05003]
gi|394299126|gb|EJE42677.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIH04003]
Length = 388
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 231/392 (58%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA+T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA +N+ +
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIA--------------------FNINIPK--------- 171
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA F+ K
Sbjct: 172 ----ESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFKHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+ GK IL+ES L + A+ + E A
Sbjct: 348 RLEGTNVERGKAILNESGLAIEPAATMAEGAQ 379
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKAILNESGLAIEPAATMAEGAQKIV 382
>gi|377813287|ref|YP_005042536.1| succinyl-CoA synthetase subunit beta [Burkholderia sp. YI23]
gi|357938091|gb|AET91649.1| succinyl-CoA synthetase, beta subunit [Burkholderia sp. YI23]
Length = 401
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/378 (42%), Positives = 226/378 (59%), Gaps = 35/378 (9%)
Query: 48 YVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
+V+K+QI AGGRG G F D K GV +V D+ +KM+ L+TKQT G V
Sbjct: 43 WVVKSQIHAGGRGAGRFVNDPDGKGGVRVVKSVDDVRDNAQKMLASVLVTKQTGPAGKEV 102
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
++ + + +I RE Y ++ DR + ++ S GG +IE VA TP + + ID
Sbjct: 103 KRLYIEEGCDIARELYLGMLVDRATSRITIMASTEGGMEIEEVAHHTPEKILKVAIDPAT 162
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+ + IA L G+ + KAA++ F+++
Sbjct: 163 GLQPFHTRQIAFGLGLTGN-QVKAASK-------FITA---------------------- 192
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
L+ F+ +DA+ +E+NPLV T +V+++DAK+NFDDNA +R +I + E DP
Sbjct: 193 ---LYQAFVDLDASIVEVNPLVVTGSGDVMALDAKLNFDDNALYRHPDIEKLRDEDEEDP 249
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
E++A+K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL+GGEPANFLDVGGG +E +
Sbjct: 250 AEIEAAKHGLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGGEPANFLDVGGGATQERVAT 309
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF++I D V+ ILVN+FGGI+ C IA+G+V A + L +PLVVRL GTNV G+ I
Sbjct: 310 AFKLILRDPKVQGILVNIFGGIMRCDVIAQGVVAAAREVDLRVPLVVRLAGTNVDAGREI 369
Query: 406 LDESKLPLIFASDLDEAA 423
L S L +I A +L +AA
Sbjct: 370 LRASGLAIIPAENLADAA 387
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRL GTNV G+ IL S L +I A +L +AA+ + A
Sbjct: 338 AQGVVAAAREVDLRVPLVVRLAGTNVDAGREILRASGLAIIPAENLADAADKIVTA 393
>gi|78188316|ref|YP_378654.1| succinyl-CoA synthetase subunit beta [Chlorobium chlorochromatii
CaD3]
gi|123580399|sp|Q3ATR4.1|SUCC_CHLCH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|78170515|gb|ABB27611.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Chlorobium
chlorochromatii CaD3]
Length = 390
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/397 (41%), Positives = 228/397 (57%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + + V+KAQI AGGRG GV + ++ I +MIG
Sbjct: 30 EAKQAAEQLFAETGSSVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAFEIARQMIG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
LIT QT G V+++++ + + I +E Y I DR + V+++S GG +IE VA
Sbjct: 83 MTLITHQTGPEGKVVSRLLIEEGMGIEKEFYVGITLDRATSRNVLMVSTEGGMEIETVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I ID G+ A++ A FL +G+
Sbjct: 143 ETPEKLLKIQIDPLFGMQGFQAREAAFFLGLEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+FR A + L+ + S+DA+ EINPLV T E +VI++DAKINFDDNA +R
Sbjct: 177 --QFR-----NAVNFITALYKAYTSIDASVAEINPLVVTSEGKVIALDAKINFDDNALYR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
K + SE DP EV+ASK NLNYV +DGN+GC+VNGAGLAM TMDII+L GG+PAN
Sbjct: 230 HKEYMELRDTSEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDIIQLAGGKPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGG + +++ + F+II SD NV+ ILVN+FGGIV C +A G++ A K L +P+
Sbjct: 290 FLDVGGTASPQTVEEGFKIILSDKNVRAILVNIFGGIVRCDRVAGGIMEAAKKMDLHLPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN +++LDES L LI A L +AA V
Sbjct: 350 IVRLEGTNASIAQQMLDESGLSLIAAKGLRDAAQKVQ 386
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L +P++VRLEGTN +++LDES L LI A L +AA
Sbjct: 333 AGGIMEAAKKMDLHLPVIVRLEGTNASIAQQMLDESGLSLIAAKGLRDAAQ 383
>gi|304394262|ref|ZP_07376185.1| succinyl-CoA ligase [ADP-forming] subunit beta [Ahrensia sp.
R2A130]
gi|303293702|gb|EFL88079.1| succinyl-CoA ligase [ADP-forming] subunit beta [Ahrensia sp.
R2A130]
Length = 397
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 218/366 (59%), Gaps = 38/366 (10%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV + ++ + +M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELPEDAKGGVRLAFSPDEVRSHVAEMLGNTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ +R + S GG DIE VA +TP + TI ID
Sbjct: 103 VNRLYLEDGADIDRELYCSILVNRETGKVSFVASTEGGMDIETVAEETPEKIHTIDIDHS 162
Query: 165 QGITES-LAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
G+T++ +A ++ F DL AA E L+
Sbjct: 163 AGVTDANVASLVSAF-----DLSGTAADEAPTLF-------------------------- 191
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
++L+ F D LE+NPL+ + + +DAK++FD NAEFRQ +I +++E
Sbjct: 192 ---RQLYKAFTDTDMAMLEVNPLIVMENGSLRVLDAKVSFDGNAEFRQADIQELRDLTEE 248
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
D +E++ASKY+L YV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG E +
Sbjct: 249 DDKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATTEKV 308
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
AF+II++D VK ILVN+FGGI+ C TIA+G+V A K L +PLVVRLEGT V+EGK
Sbjct: 309 TAAFKIITADPKVKGILVNIFGGIMRCDTIAEGVVTAVKEVGLQVPLVVRLEGTKVEEGK 368
Query: 404 RILDES 409
IL+ S
Sbjct: 369 AILNGS 374
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDES 505
A +V A K L +PLVVRLEGT V+EGK IL+ S
Sbjct: 339 AEGVVTAVKEVGLQVPLVVRLEGTKVEEGKAILNGS 374
>gi|403046826|ref|ZP_10902295.1| succinyl-CoA synthetase subunit beta [Staphylococcus sp. OJ82]
gi|402763522|gb|EJX17615.1| succinyl-CoA synthetase subunit beta [Staphylococcus sp. OJ82]
Length = 388
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 233/391 (59%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN K YV+KAQI AGGRG GV ++ ++ ++++G
Sbjct: 28 ADEAVEKAKELNSKVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++ + + +I +E Y V DR + ++ S GGT+IE VAA++
Sbjct: 81 LVTHQTGPEGKEIKRLYIEEGCDIQKEYYVGFVIDRATDSVTLMASEEGGTEIEEVAAES 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPIVGLAPYQARRIAFNINIPKESINKAAK--------FLVSL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T++ +V+++DAK+NFDDNA F+ K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTNDGDVLALDAKVNFDDNALFKHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDIIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV++GK IL++S L + A+ + E A
Sbjct: 348 RLEGTNVEKGKEILEDSGLAIESAATMAEGA 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV++GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVEKGKEILEDSGLAIESAATMAEGAQKIV 382
>gi|410460661|ref|ZP_11314335.1| succinyl-CoA synthetase subunit beta [Bacillus azotoformans LMG
9581]
gi|409926715|gb|EKN63869.1| succinyl-CoA synthetase subunit beta [Bacillus azotoformans LMG
9581]
Length = 386
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 227/376 (60%), Gaps = 40/376 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+V+KAQI AGGRG GV ++ ++ +++G L+T QT G V +
Sbjct: 43 WVVKAQIHAGGRGKA-------GGVKVAKSLDEVKQYASEILGKTLVTHQTGPEGKEVKR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+++ + +I +E Y +V DR + V++ S GGT+IE VAA TP + ID G+
Sbjct: 96 LLIEEGCDIKKEYYVGLVLDRATSRVVLMASEEGGTEIEEVAAATPEKIFKEEIDPAIGL 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
FQ A+++A + +L KA +
Sbjct: 156 QA-----------FQ----------------------ARRLAYQINIPNELVNKAVAFMM 182
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+N ++ D + EINPLV T + +V+++DAK+NFD NA +RQK++ + ++ E DP+E
Sbjct: 183 GLYNAYIDKDCSIAEINPLVVTGDGQVMALDAKLNFDSNALYRQKDVLAYRDLEEEDPKE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GG+PANFLDVGGG E + +AF
Sbjct: 243 IEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVGGGATAEKVTEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II SD NVK I VN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNV GK+IL
Sbjct: 303 KIILSDPNVKGIFVNIFGGIMKCDVIAEGVVEAAKQVGLSVPLVVRLEGTNVDLGKKILA 362
Query: 408 ESKLPLIFASDLDEAA 423
ES + ++ A + + A
Sbjct: 363 ESDIDIVPAESMADGA 378
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV GK+IL ES + ++ A + + A +
Sbjct: 329 AEGVVEAAKQVGLSVPLVVRLEGTNVDLGKKILAESDIDIVPAESMADGAQKIV 382
>gi|357008060|ref|ZP_09073059.1| succinyl-CoA synthetase subunit beta [Paenibacillus elgii B69]
Length = 386
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 228/393 (58%), Gaps = 40/393 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K L V+KAQI AGGRG GV N+ ++ ++++G L+T
Sbjct: 31 AVEAAKSLGTPVVVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAQEILGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR V++ S GGT+IE VAA TP
Sbjct: 84 HQTGPEGKEVKRLLIEQGCDIKKEYYIGLVVDRATGRVVMMASEEGGTEIEEVAAHTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A+K+A +
Sbjct: 144 IFKEVIDPAVGLQA-----------FQ----------------------ARKLAYAINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
G+L +KA + L+ F+ D + EINPLV T + V+++DAK+NFD NA FR K+I
Sbjct: 171 GELVSKAVKFMTALYAAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALFRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASK++L+Y+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKFDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K L PLVVRLE
Sbjct: 291 GGATKEKVTEAFKIILSDENVKGIFVNIFGGIMKCDIIAEGVVAAAKELGLDRPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
GTNV GK+IL+ES L ++ A + + A + A
Sbjct: 351 GTNVDLGKKILNESGLNIVAADSMADGAQKIVA 383
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L PLVVRLEGTNV GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVVAAAKELGLDRPLVVRLEGTNVDLGKKILNESGLNIVAADSMADGAQKIV 382
>gi|251772185|gb|EES52755.1| succinyl-CoA synthetase, beta subunit [Leptospirillum
ferrodiazotrophum]
Length = 395
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 220/387 (56%), Gaps = 41/387 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
Y +KAQI AGGRG GV +V +IP +E ++G L+T QT G V K
Sbjct: 49 YAVKAQIHAGGRGKA-------GGVKIAKSVSEIPGYVEALLGKTLVTHQTGPEGRLVRK 101
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V + + I RE Y +V DR ++ S GG +IE V+A P + T+ +D G
Sbjct: 102 VWIEEGAQIAREFYLSLVLDRSSRRISILASTEGGMEIEEVSAAHPEKILTLSVDPEMGC 161
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
S + +++A FL L +T +
Sbjct: 162 K---------------------------------SFVGRRVASFLGLPITLYGSFSTLLA 188
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ FL D +EINPL++T + ++++DAK++FDDNA +RQ+ I + ++ E + E
Sbjct: 189 NLYRFFLDTDCMMVEINPLIQTGDGRLLALDAKVSFDDNALYRQEKILALRDLFEENELE 248
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK+ LNYV +DG+I C+VNGAGLAMATMD+I L GG PANFLDVGGG ++E++ QAF
Sbjct: 249 IEASKHRLNYVKLDGSIACMVNGAGLAMATMDVIALAGGTPANFLDVGGGASKETVEQAF 308
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
RI+ D VK I VN+FGGIV C IA G++ A K KL +PLVVRL+GTN +EG+ +L
Sbjct: 309 RILLGDPEVKGIFVNIFGGIVRCERIAGGIIAAAKDVKLHVPLVVRLQGTNAKEGREMLR 368
Query: 408 ESKLPLIFASDLDEAAS-LVNACKSFK 433
ES L L A +L E A +V A K K
Sbjct: 369 ESGLDLQVAEELFEGAQKIVQAVKGAK 395
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K KL +PLVVRL+GTN +EG+ +L ES L L A +L E A + A
Sbjct: 335 AGGIIAAAKDVKLHVPLVVRLQGTNAKEGREMLRESGLDLQVAEELFEGAQKIVQA 390
>gi|212639579|ref|YP_002316099.1| succinyl-CoA synthetase subunit beta [Anoxybacillus flavithermus
WK1]
gi|212561059|gb|ACJ34114.1| Succinyl-CoA synthetase, beta subunit [Anoxybacillus flavithermus
WK1]
Length = 401
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 229/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV ++ ++ +++G L+T
Sbjct: 46 AVEAAKELGSSVCVVKAQIHAGGRGKA-------GGVKVAKSLDEVRTYASELLGKVLVT 98
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 99 HQTGPEGKEVKRLLIEEGCDIKKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEK 158
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A+++A +
Sbjct: 159 IFKEYIDPAVGLQA-----------FQ----------------------ARRMAFNINIP 185
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 186 KELVNQAVKFMLGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 245
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 246 EYRDLDEEDPKEVEASKYDLNYISLDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 305
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 306 GGATTEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIANGIVEATKQVGLNLPLVVRLE 365
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L + A + + A
Sbjct: 366 GTNVELGKKILEESGLNITAAESMADGA 393
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL+ES L + A + + A +
Sbjct: 344 ANGIVEATKQVGLNLPLVVRLEGTNVELGKKILEESGLNITAAESMADGAQKIV 397
>gi|420163417|ref|ZP_14670164.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM095]
gi|394235106|gb|EJD80680.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
NIHLM095]
Length = 385
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 229/384 (59%), Gaps = 40/384 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+LN YV+KAQI AGGRG GV ++ ++ +++G +L+T QT
Sbjct: 36 KELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA+TP +
Sbjct: 89 EGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKET 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID G++ A+ IA +N+ + +
Sbjct: 149 IDPVVGLSPYQARRIA--------------------FNINIPK-------------ESVG 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
KA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K+I ++
Sbjct: 176 KATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDILELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFLDVGGG +
Sbjct: 236 EEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVGGGATK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVVRLEGTNV+
Sbjct: 296 EKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLEGTNVE 355
Query: 401 EGKRILDESKLPLIFASDLDEAAS 424
GK IL+ES L + A+ + E A
Sbjct: 356 RGKAILNESGLAIEPAATMAEGAQ 379
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKAILNESGLAIEPAATMAEGAQ 379
>gi|403352555|gb|EJY75795.1| Succinyl-CoA synthetase, beta subunit [Oxytricha trifallax]
Length = 445
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/412 (40%), Positives = 228/412 (55%), Gaps = 46/412 (11%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+A T + L N ++KAQ+ AGGRG GH +G K GV ++I ++MIG
Sbjct: 67 EEAHTIASKLS--NKGGLILKAQVKAGGRGKGHLTSGLKGGVQICKTPEEIADKTKQMIG 124
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ LIT QTP G+ V V+V + V+I + Y + DR + G V+ S GG DIE VA
Sbjct: 125 YNLITHQTPPQGLLVKSVLVHEGVDIDGQIYLAFLHDRKNQGLCVVSSTQGGMDIEEVAE 184
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
K P +K ID+ +G +E A IAD L+ +G L+ + +Q+L L
Sbjct: 185 KNPQAIKVHTIDIVKGFSEQDAAKIADSLQLKGKLREQG---IQQLLKL----------- 230
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+++FL +DATQ+EINP T + ++ VDAKIN DDNA FR
Sbjct: 231 -------------------YSMFLKLDATQIEINPWAITPDNDLYCVDAKINIDDNALFR 271
Query: 271 QKNIFSQNEVSES----DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
+ I ++ S S DP E A LNY+ +DGNIGC+VNGAGLAMATMDII GG
Sbjct: 272 HQQIVEMHKQSASSEDVDPNEEKAVAAGLNYIALDGNIGCMVNGAGLAMATMDIISQKGG 331
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKL 386
PANFLDVGG + + + AF I+S VK I VN+FGGI+ C IA+G++ A K +
Sbjct: 332 SPANFLDVGGSASTDQVKTAFEILSQHPQVKAIFVNIFGGIMKCDVIAEGIIKAAKQVHV 391
Query: 387 SIPLVVRLEGTNVQEGKRILDE------SKLPLIFASDLDEAA-SLVNACKS 431
+P+VVRL GTN +++ E + +I D D AA ++V A KS
Sbjct: 392 PVPIVVRLTGTNADVAFKLMTEFAEKNKDTIKVIVNKDFDSAADNVVEAAKS 443
>gi|254294601|ref|YP_003060624.1| succinyl-CoA synthetase subunit beta [Hirschia baltica ATCC 49814]
gi|254043132|gb|ACT59927.1| succinyl-CoA synthetase, beta subunit [Hirschia baltica ATCC 49814]
Length = 398
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 224/385 (58%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F + G K GV + +D+ +M+G+ L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEAEAGEKGGVRLAFSKEDVISNAAQMLGNTLVTHQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I E Y ++ DR P + S GG DIE VA TP + TI ID
Sbjct: 103 VNRLYIEDGADIKTELYLSLLVDRASGQPAFVASTEGGMDIEEVAESTPEKILTITIDPV 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T+++A+ + D L +G + + LS +
Sbjct: 163 AGVTDAVAESLCDALGLEGTARED---------GIALSRI-------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D LE+NPL+ + + +DAK++FD NA FR +I + +E D
Sbjct: 194 ----LYKAFTEKDMDMLEVNPLIVMENERLRVLDAKMSFDGNALFRHPDIMELRDKTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++AS+++L Y+ ++G IGC+VNGAGLAMATMDIIKL+G EPANF DVGGG N E +
Sbjct: 250 EKEIEASEWDLAYIALEGTIGCMVNGAGLAMATMDIIKLYGEEPANFCDVGGGANAEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D VK ILVN+FGGI+ C IA+G++ A K L++PLVVRLEGTNV++GK
Sbjct: 310 AAFKIIMKDPAVKGILVNIFGGIMKCDVIAEGVLQAVKETNLAVPLVVRLEGTNVEKGKE 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I+ S L +I A+DLD+AA + A
Sbjct: 370 IIANSGLNVIPANDLDDAAQKIVAA 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L++PLVVRLEGTNV++GK I+ S L +I A+DLD+AA + A
Sbjct: 339 AEGVLQAVKETNLAVPLVVRLEGTNVEKGKEIIANSGLNVIPANDLDDAAQKIVAA 394
>gi|417643547|ref|ZP_12293589.1| succinate-CoA ligase, beta subunit [Staphylococcus warneri VCU121]
gi|445059834|ref|YP_007385238.1| succinyl-CoA synthetase subunit beta [Staphylococcus warneri SG1]
gi|330685654|gb|EGG97295.1| succinate-CoA ligase, beta subunit [Staphylococcus epidermidis
VCU121]
gi|443425891|gb|AGC90794.1| succinyl-CoA synthetase subunit beta [Staphylococcus warneri SG1]
Length = 388
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 232/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELDSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTGDGDVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIMELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D +VK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDEHVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 348 RLEGTNVERGKEILNDSGLAIEPAATMAEGAQKI 381
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILNDSGLAIEPAATMAEGAQKIV 382
>gi|320354457|ref|YP_004195796.1| succinyl-CoA synthetase subunit beta [Desulfobulbus propionicus DSM
2032]
gi|320122959|gb|ADW18505.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Desulfobulbus
propionicus DSM 2032]
Length = 385
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 211/355 (59%), Gaps = 33/355 (9%)
Query: 72 VHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHN 131
V D+ P+ + +IG L+TKQT G V KV+V + +NI +E Y I+ DR
Sbjct: 59 VKLAKTKADVKPVADSIIGMTLVTKQTGAQGKKVRKVLVEEGLNIKKELYLSIIPDRETA 118
Query: 132 GPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAAT 191
++ S GG DIE VAAKTP + T+ + I F F
Sbjct: 119 TVAIVCSQDGGMDIEEVAAKTPERIITVNV-----------SPITGFQPFH--------- 158
Query: 192 EVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDE 251
A+KI LE DL+ + + V+ L+ LF++ D + +EINPL+ T E
Sbjct: 159 -------------ARKICFGLEIEKDLQKQMSALVKNLYELFMAYDCSMVEINPLIITAE 205
Query: 252 REVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGA 311
++++DAK++ D NA FR ++ ++ E DP E +A+++ LNY+ +DGN+G +VNGA
Sbjct: 206 GNILALDAKMDIDGNAMFRHPDVKEMRDIDEEDPVEAEAAQFGLNYINLDGNVGNIVNGA 265
Query: 312 GLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCA 371
GLAMATMDI+KL G PANFLDVGGG N E+I FR+I D VK IL+NVFGGI+ C
Sbjct: 266 GLAMATMDIVKLAGASPANFLDVGGGANAEAIENGFRLIMKDPAVKGILINVFGGILRCD 325
Query: 372 TIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+AKG+V A KLS+P+VVR+EGTNV+EG+RIL ES L LI A DL +AA V
Sbjct: 326 ILAKGVVQAATKLKLSVPVVVRMEGTNVEEGRRILAESGLDLINAKDLADAAEKV 380
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A KLS+P+VVR+EGTNV+EG+RIL ES L LI A DL +AA
Sbjct: 328 AKGVVQAATKLKLSVPVVVRMEGTNVEEGRRILAESGLDLINAKDLADAA 377
>gi|239826601|ref|YP_002949225.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. WCH70]
gi|259511784|sp|C5D8V2.1|SUCC_GEOSW RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|239806894|gb|ACS23959.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. WCH70]
Length = 386
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 228/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV ++ ++ +++G L+T
Sbjct: 31 AVEAAKELGSPVCVVKAQIHAGGRGKA-------GGVKVAKSLDEVRTYASELLGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A+++A +
Sbjct: 144 IFKEYIDPAVGLQA-----------FQ----------------------ARRLAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVNQAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVEATKQVGLNLPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL ES L + A + + A
Sbjct: 351 GTNVELGKKILQESGLNITAADSMADGA 378
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K L++PLVVRLEGTNV+ GK+IL ES L + A + + A +
Sbjct: 329 ASGIVEATKQVGLNLPLVVRLEGTNVELGKKILQESGLNITAADSMADGAQKIV 382
>gi|255036495|ref|YP_003087116.1| succinyl-CoA synthetase subunit beta [Dyadobacter fermentans DSM
18053]
gi|254949251|gb|ACT93951.1| succinyl-CoA synthetase, beta subunit [Dyadobacter fermentans DSM
18053]
Length = 407
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 232/398 (58%), Gaps = 39/398 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + + K YV+K+QI AGGRG G + GV +V+D+ I ++G L+T
Sbjct: 35 ARELSQQTGTKWYVVKSQIHAGGRGKGRIVGSEQRGVALAKSVEDVRTISNNILGKVLVT 94
Query: 96 KQTPKTGINVNKVMVAKSVNI-----TRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
QT G VNKV++A+ V +E Y I+ DR N V++ S GG DIE VA
Sbjct: 95 HQTGAEGKRVNKVLIAEDVYYPGPSEPKEYYLSILLDRGRNCNVIMASTEGGMDIEEVAE 154
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + ID G+ A+ +A L +GD A E+ K F+S+
Sbjct: 155 RTPEKIIKEWIDPKVGLQPFQARKVAFALGLEGD----AFKEMVK----FISA------- 199
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L+ + D++ EINP+++T + ++++VDAK++ DDNA +R
Sbjct: 200 ------------------LYRAYAESDSSMFEINPVLKTSDNKILAVDAKVDLDDNALYR 241
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
+ + +E DP EV+A NLNYV +DGN+GC+VNGAGLAMATMD+IKL GGEPAN
Sbjct: 242 HPELAEMRDTNEEDPLEVEAGANNLNYVKLDGNVGCMVNGAGLAMATMDLIKLSGGEPAN 301
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIP 389
FLDVGGG N ++ FRII D NVK IL+N+FGGIV C +A G+V A K+ ++ +P
Sbjct: 302 FLDVGGGANARTVEAGFRIILKDPNVKAILINIFGGIVRCDRVAAGVVEAYKAIGEIPVP 361
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
++VRL+GTN +EG RI++ES L + A + EAA+ V+
Sbjct: 362 IIVRLQGTNAEEGARIINESGLKVYSAIEFKEAAAKVS 399
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA +V A K+ ++ +P++VRL+GTN +EG RI++ES L + A + EAA
Sbjct: 345 AAGVVEAYKAIGEIPVPIIVRLQGTNAEEGARIINESGLKVYSAIEFKEAA 395
>gi|312111692|ref|YP_003990008.1| succinyl-CoA synthetase subunit beta [Geobacillus sp. Y4.1MC1]
gi|336236067|ref|YP_004588683.1| succinyl-CoA synthetase subunit beta [Geobacillus
thermoglucosidasius C56-YS93]
gi|423720610|ref|ZP_17694792.1| succinyl-CoA ligase [ADP-forming] subunit beta [Geobacillus
thermoglucosidans TNO-09.020]
gi|311216793|gb|ADP75397.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. Y4.1MC1]
gi|335362922|gb|AEH48602.1| succinyl-CoA synthetase, beta subunit [Geobacillus
thermoglucosidasius C56-YS93]
gi|383365963|gb|EID43254.1| succinyl-CoA ligase [ADP-forming] subunit beta [Geobacillus
thermoglucosidans TNO-09.020]
Length = 386
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/389 (41%), Positives = 228/389 (58%), Gaps = 40/389 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV ++ ++ +++G L+T
Sbjct: 31 AVEAAKELGSPVCVVKAQIHAGGRGKA-------GGVKVAKSLDEVRTYASELLGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYIGFVVDRATSRVVLMGSEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A+++A +
Sbjct: 144 IFKEYIDPAVGLQA-----------FQ----------------------ARRLAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +AA + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVNQAAKFMLGLYQVFVEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD VK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGATTEKVTEAFKIILSDPKVKGIFVNIFGGIMKCDVIANGIVEATKQVGLNLPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAAS 424
GTNV+ GK+IL ES L ++ A + + A
Sbjct: 351 GTNVELGKKILQESGLNIVAAESMADGAQ 379
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL ES L ++ A + + A +
Sbjct: 329 ANGIVEATKQVGLNLPLVVRLEGTNVELGKKILQESGLNIVAAESMADGAQKIV 382
>gi|114769289|ref|ZP_01446915.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
HTCC2255]
gi|114550206|gb|EAU53087.1| succinyl-CoA synthetase subunit beta [Rhodobacterales bacterium
HTCC2255]
Length = 397
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/395 (41%), Positives = 226/395 (57%), Gaps = 41/395 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHF 74
PVS K +AR+A N +L +V+KAQI AGGRG G F G K GV
Sbjct: 18 PVSVGRPVYKAS--EARSAAN---ELGGPLWVVKAQIHAGGRGKGSFKEPAAGEKGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
T ++ + EKM+G+ L+T QT G VN++ + +I E Y ++ DR +
Sbjct: 73 TFSIDEAASEAEKMLGNTLVTHQTGPAGKQVNRIYIEDGSDIETELYLAVLLDRTTSRIS 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
+ S GG DIE VA KTP + T+ ID G T+ ++++ L+ G+
Sbjct: 133 FVASTEGGMDIEAVAEKTPEKIITVTIDPSFGFTKENGIEVSNALKLTGN---------- 182
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
I + +E L+ +F+ D LEINPL+ + +
Sbjct: 183 ------------NIDECIEL-----------TSNLYRMFVERDMDMLEINPLIVMENGGL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+DAK+ FD NA FRQ +I + + +E D +E++ASKY+L+Y+ +DG IGC+VNGAGLA
Sbjct: 220 KCLDAKMAFDGNALFRQPDILALRDETEEDAKELEASKYDLSYIALDGEIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL G EPANFLDVGGG E + AF+II+SD VK ILVN+FGGI+ C IA
Sbjct: 280 MATMDIIKLKGAEPANFLDVGGGATAEKVTAAFKIITSDPKVKGILVNIFGGIMRCDVIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDES 409
+G+V A K L++PLVVRLEGT VQEGK I++ S
Sbjct: 340 EGVVEAVKEVGLTVPLVVRLEGTKVQEGKDIINNS 374
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDES 505
A +V A K L++PLVVRLEGT VQEGK I++ S
Sbjct: 339 AEGVVEAVKEVGLTVPLVVRLEGTKVQEGKDIINNS 374
>gi|392971850|ref|ZP_10337242.1| succinyl-CoA synthetase beta subunit [Staphylococcus equorum subsp.
equorum Mu2]
gi|392509563|emb|CCI60532.1| succinyl-CoA synthetase beta subunit [Staphylococcus equorum subsp.
equorum Mu2]
Length = 388
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/391 (41%), Positives = 232/391 (59%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN K YV+KAQI AGGRG GV ++ ++ ++++G
Sbjct: 28 ADEAVEKAKELNSKVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYAKELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++ + + +I +E Y V DR + ++ S GGT+IE VAA++
Sbjct: 81 LVTHQTGPEGKEIKRLYIEEGCDIQKEYYVGFVIDRATDSVTLMASEEGGTEIEEVAAES 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPIVGLAPYQARRIAFNINIPKESINKAAK--------FLVSL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T++ +V+++DAK+NFDDNA F+ K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTNDGDVLALDAKVNFDDNALFKHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E+ ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIKASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDIIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV++GK IL++S L + A+ + E A
Sbjct: 348 RLEGTNVEKGKEILEDSGLAIESAATMAEGA 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV++GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVEKGKEILEDSGLAIESAATMAEGAQKIV 382
>gi|138894729|ref|YP_001125182.1| succinyl-CoA synthetase subunit beta [Geobacillus
thermodenitrificans NG80-2]
gi|196247652|ref|ZP_03146354.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. G11MC16]
gi|166979701|sp|A4IM83.1|SUCC_GEOTN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|134266242|gb|ABO66437.1| Succinyl-CoA synthase, beta subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196212436|gb|EDY07193.1| succinyl-CoA synthetase, beta subunit [Geobacillus sp. G11MC16]
Length = 386
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 230/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K L V+KAQI AGGRG GV +++++ +++G L+T
Sbjct: 31 AVEAAKALGTSVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASELLGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAAKTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +D G+ A+ +A F ++ +K+ +
Sbjct: 144 IFKEYVDPAVGLQAFQARRLA-----------------------FNINIPKKLVN----- 175
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+A + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +R +I
Sbjct: 176 -----QAVKFMMGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDIM 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK +GGEPANFLDVG
Sbjct: 231 EYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +EE + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGASEEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIASGIVAATKQVGLTLPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL ES L + A + + A
Sbjct: 351 GTNVELGKKILQESGLNITAAESMADGA 378
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K L++PLVVRLEGTNV+ GK+IL ES L + A + + A +
Sbjct: 329 ASGIVAATKQVGLTLPLVVRLEGTNVELGKKILQESGLNITAAESMADGAQKIV 382
>gi|410456953|ref|ZP_11310800.1| succinyl-CoA synthetase subunit beta [Bacillus bataviensis LMG
21833]
gi|409926927|gb|EKN64078.1| succinyl-CoA synthetase subunit beta [Bacillus bataviensis LMG
21833]
Length = 386
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/388 (41%), Positives = 230/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K L K V+KAQI AGGRG GV N++++ +++G L+T
Sbjct: 31 AVEAAKQLGTKVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYANEILGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSRVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEEIDPAIGLQP-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+N ++ D + EINPLV T + +V+++DAK+NFD NA +RQK+I
Sbjct: 171 TELVNQAVKFMTGLYNAYIENDCSIAEINPLVVTGDGKVMALDAKLNFDANALYRQKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ E DP+E++ASKY+L+YV +DGNIGC+VNGAGLAM+TMDII +GG+PANFLDVG
Sbjct: 231 AFRDLEEEDPKEIEASKYDLSYVALDGNIGCMVNGAGLAMSTMDIINHYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A K LS+PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDPNVKGIFVNIFGGIMKCDVIAEGVVEAAKQVGLSVPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV GK+IL ES + ++ A + + A
Sbjct: 351 GTNVDLGKKILAESSVEIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV GK+IL ES + ++ A + + A +
Sbjct: 329 AEGVVEAAKQVGLSVPLVVRLEGTNVDLGKKILAESSVEIVAAESMADGAQKIV 382
>gi|209965472|ref|YP_002298387.1| succinyl-CoA synthetase beta chain [Rhodospirillum centenum SW]
gi|226734979|sp|B6IP72.1|SUCC_RHOCS RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|209958938|gb|ACI99574.1| succinyl-CoA synthetase beta chain [Rhodospirillum centenum SW]
Length = 398
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 234/405 (57%), Gaps = 39/405 (9%)
Query: 29 CLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF--DNGFKSGVHFTNNVQDIPPILE 86
LE+AR + K+L +V+K+QI AGGRG G F D K GV ++ D+ +
Sbjct: 27 TLEEARA---VAKELGGPVWVVKSQIHAGGRGAGRFKDDPNGKGGVRVVKSIDDVVASTD 83
Query: 87 KMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIE 146
M+G L+TKQT G V ++ V + +I RE Y ++ DR + ++ S GG +IE
Sbjct: 84 AMLGKVLVTKQTGPEGKEVKRIYVEEGADIKRELYLSMLLDRATSRITIVASTEGGMEIE 143
Query: 147 NVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQ 206
VA +P + + ID QG+ A+ +A L +G +V L
Sbjct: 144 EVAHTSPEKIVKVAIDPVQGLQGYHARKVAFALGLEG-------KQVGACTKFLLG---- 192
Query: 207 KIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDN 266
++ F +D + +E+NPLV T EV+++DAK+NFDDN
Sbjct: 193 ----------------------MYKAFTDLDMSLVEVNPLVVTGSGEVLALDAKVNFDDN 230
Query: 267 AEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
A +R I + SE + E +A+++ LNYV +DGNIGC+VNGAGLAMATMDIIKL+GG
Sbjct: 231 ALYRHHEIEELRDESEEEASETEATRHGLNYVKLDGNIGCMVNGAGLAMATMDIIKLYGG 290
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKL 386
EPANFLDVGGG +E + AF++I SD +V+ ILVN+FGGI+ C IA G+V A + L
Sbjct: 291 EPANFLDVGGGATKERVTTAFKLILSDPHVEGILVNIFGGIMRCDVIADGVVAAAREVSL 350
Query: 387 SIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
+PLVVRLEGTNV GK+IL ES LP++ A +L D A +V A K
Sbjct: 351 HVPLVVRLEGTNVDLGKKILAESGLPILSADNLADAAEKIVKAVK 395
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV GK+IL ES LP++ A +L +AA + A
Sbjct: 338 ADGVVAAAREVSLHVPLVVRLEGTNVDLGKKILAESGLPILSADNLADAAEKIVKA 393
>gi|188996560|ref|YP_001930811.1| succinyl-CoA synthetase subunit beta [Sulfurihydrogenibium sp.
YO3AOP1]
gi|226734995|sp|B2V8I4.1|SUCC_SULSY RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|188931627|gb|ACD66257.1| succinyl-CoA synthetase, beta subunit [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 389
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 229/392 (58%), Gaps = 40/392 (10%)
Query: 32 DARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGH 91
D + A ++L V+KAQI AGGRG GV +++++ I +++G
Sbjct: 27 DVKEAVEAAEELGTWPVVVKAQIHAGGRGKA-------GGVKLAKSIEEVQQIASELLGK 79
Query: 92 KLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAK 151
KL T QT G+ V+++ + ++ I +E Y I DR + P++++S +GG +IE VAA
Sbjct: 80 KLATFQTGPEGLPVSRLYIEEATAIDKEFYVAITLDRSKSKPIIMVSAAGGMEIEEVAAT 139
Query: 152 TPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADF 211
P + T Q I F+ + S A+++A
Sbjct: 140 NPEAIIT--------------QTIEPFIGLR-------------------SYHARELALK 166
Query: 212 LEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQ 271
L +L KAA+ L+ +++ +DA+ +EINPLV T + ++ +DAKI FDDN FR
Sbjct: 167 LGLPKNLLNKAASIFTTLYKIYIELDASMVEINPLVLTKDGNIVILDAKIEFDDNGLFRH 226
Query: 272 KNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANF 331
I ++ ++ P EV+A K+NLNY+ +DGNI C+VNGAGLAM+TMD IKL GGEPANF
Sbjct: 227 PEIMEMDDPTQISPLEVEAKKFNLNYIKLDGNIACMVNGAGLAMSTMDTIKLAGGEPANF 286
Query: 332 LDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLV 391
LDVGG N I AF+II SD NVK I +N+FGGI+ C +A+G++ A K +++P++
Sbjct: 287 LDVGGSANATQIANAFKIILSDPNVKAIFINIFGGILRCDRLAEGIITAAKEVSINVPVI 346
Query: 392 VRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VR+EGTNV+ GK++L ES LPLI A + E A
Sbjct: 347 VRMEGTNVELGKKMLQESGLPLITADTMWEGA 378
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K +++P++VR+EGTNV+ GK++L ES LPLI A + E A
Sbjct: 329 AEGIITAAKEVSINVPVIVRMEGTNVELGKKMLQESGLPLITADTMWEGA 378
>gi|340355014|ref|ZP_08677708.1| succinyl-CoA ligase subunit beta [Sporosarcina newyorkensis 2681]
gi|339622811|gb|EGQ27324.1| succinyl-CoA ligase subunit beta [Sporosarcina newyorkensis 2681]
Length = 391
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/390 (40%), Positives = 228/390 (58%), Gaps = 40/390 (10%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
+ A + K++ + V+KAQI AGGRG GV ++ + ++IG +L
Sbjct: 34 KEAMTVAKEIGTEPIVVKAQIHAGGRGKA-------GGVKIVKTPDEVRAVAAELIGKQL 86
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+T QT G V +++V + ++I +E Y +V DR + ++ S GG +IE+VA K P
Sbjct: 87 VTHQTGPEGQEVKRLLVEEGIDIEKEFYIGLVVDRATDRVTLMGSAEGGVEIEDVAEKNP 146
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ ID G+ A+ +A +E L + K +LFL
Sbjct: 147 EKIFYEIIDPVVGLAPFQARRMAFNMEIPSGL-------INKAVSLFLG----------- 188
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
L+ +F DA+ +EINPLV T ++ V+++DAK NFDDNA FR K+
Sbjct: 189 ---------------LYKVFSEKDASIVEINPLVVTKDQRVLALDAKFNFDDNATFRHKD 233
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I + E DP+E++ASK +L+Y+ +DGNIGC+VNGAGLAMATMD I +GGEPANFLD
Sbjct: 234 IVELRDFDEEDPKEIEASKLDLSYISLDGNIGCMVNGAGLAMATMDTIHYYGGEPANFLD 293
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +E + AF+II SD NVK I VN+FGGI+ C IA+G++ A K +L +PLVVR
Sbjct: 294 VGGGAKKEKVAGAFKIILSDPNVKGIFVNIFGGIMKCDVIAEGVIEAAKEVELQVPLVVR 353
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LEGTNV+ GK +L+ES + ++ A + E A
Sbjct: 354 LEGTNVERGKALLEESGINIVAADSMAEGA 383
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K +L +PLVVRLEGTNV+ GK +L+ES + ++ A + E A +
Sbjct: 334 AEGVIEAAKEVELQVPLVVRLEGTNVERGKALLEESGINIVAADSMAEGAKKIV 387
>gi|223044213|ref|ZP_03614250.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
63) (VEG63) [Staphylococcus capitis SK14]
gi|314933426|ref|ZP_07840791.1| succinyl-CoA synthase, beta subunit [Staphylococcus caprae C87]
gi|417907040|ref|ZP_12550816.1| succinate-CoA ligase, beta subunit [Staphylococcus capitis VCU116]
gi|222442363|gb|EEE48471.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
63) (VEG63) [Staphylococcus capitis SK14]
gi|313653576|gb|EFS17333.1| succinyl-CoA synthase, beta subunit [Staphylococcus caprae C87]
gi|341596671|gb|EGS39262.1| succinate-CoA ligase, beta subunit [Staphylococcus capitis VCU116]
Length = 388
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 231/392 (58%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELDSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA +N+ +
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIA--------------------FNINIPK--------- 171
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 172 ----ESIGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIVELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NV+ I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVRGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+ GK IL++S L + A+ + E A
Sbjct: 348 RLEGTNVERGKEILNDSGLAIEPAATMAEGAQ 379
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILNDSGLAIEPAATMAEGAQKIV 382
>gi|414160553|ref|ZP_11416819.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410878073|gb|EKS25962.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 388
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 231/392 (58%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + K+L+ YV+KAQI AGGRG GV ++ ++ +++G
Sbjct: 28 AEEAVDKAKELDTDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVEAYANELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPQGKEVKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA +N+ + +
Sbjct: 141 PEKIFKETIDPVVGLAPYQARRIA--------------------FNINIPKESIN----- 175
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
KAA + L+N+F+ DA+ +EINPLV T + +V+++DAKINFDDNA FR K
Sbjct: 176 --------KAAKFLIALYNVFIEKDASIVEINPLVTTGDGDVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D +VK I VN+FGGI+ C IA+G+V A K L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDHVKGIFVNIFGGIMRCDVIAEGIVAAVKEVDLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+ GK+IL +S L + A+ + E A
Sbjct: 348 RLEGTNVEIGKQILKDSGLAIEPAATMAEGAQ 379
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL +S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVDLTLPLVVRLEGTNVEIGKQILKDSGLAIEPAATMAEGAQKIV 382
>gi|229086389|ref|ZP_04218565.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock3-44]
gi|228696905|gb|EEL49714.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock3-44]
Length = 386
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 228/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ ++ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 NELVGQAVKFMMGLYRAYIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|167644201|ref|YP_001681864.1| succinyl-CoA synthetase subunit beta [Caulobacter sp. K31]
gi|189046906|sp|B0T3D1.1|SUCC_CAUSK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|167346631|gb|ABZ69366.1| succinyl-CoA synthetase, beta subunit [Caulobacter sp. K31]
Length = 399
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/364 (42%), Positives = 219/364 (60%), Gaps = 34/364 (9%)
Query: 69 KSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDR 128
K GV +V+D+ +M+G L+T QT G VN++ V + I +E Y ++ DR
Sbjct: 67 KGGVRVVKSVEDVKTNAAEMLGRVLVTHQTGPKGKQVNRLYVEEGAAIAKEFYLSLLVDR 126
Query: 129 LHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAK 188
+ V+ S GG DIE+VA TP + + ID G+
Sbjct: 127 ETSMVSVVASTEGGMDIEDVAHATPEKIHSFSIDPATGV--------------------- 165
Query: 189 AATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVE 248
W + A+ +A L G L +AAT + +L+ FL+ D LEINPL+
Sbjct: 166 --------W----PTHARALAKALGLTGGLAKEAATLLGQLYTAFLAKDMAMLEINPLIV 213
Query: 249 TDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLV 308
T++ + +DAK++FD NA +R +I + + SE DP+E++ASKY+L Y+ +DG IGC+V
Sbjct: 214 TEDDHLKVLDAKLSFDGNALYRHPDIRALRDESEEDPKEIEASKYDLAYIALDGEIGCMV 273
Query: 309 NGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIV 368
NGAGLAMATMDIIKL+G EPANFLDVGGG ++E + AF+II++D VK ILVN+FGGI+
Sbjct: 274 NGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVKGILVNIFGGIM 333
Query: 369 NCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVN 427
C IA+G++ A K L +PLVVRLEGTNV+ GK+I+ ES L +I A+DL D A +V
Sbjct: 334 RCDIIAEGVIAAVKEVGLQVPLVVRLEGTNVELGKKIIRESGLNVIAANDLSDGAEKIVK 393
Query: 428 ACKS 431
A K
Sbjct: 394 AVKG 397
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I+ ES L +I A+DL + A + A
Sbjct: 339 AEGVIAAVKEVGLQVPLVVRLEGTNVELGKKIIRESGLNVIAANDLSDGAEKIVKA 394
>gi|312113427|ref|YP_004011023.1| succinyl-CoA synthetase subunit beta [Rhodomicrobium vannielii ATCC
17100]
gi|311218556|gb|ADP69924.1| succinyl-CoA synthetase, beta subunit [Rhodomicrobium vannielii
ATCC 17100]
Length = 399
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 230/396 (58%), Gaps = 36/396 (9%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A + K+L V+KAQI AGGRG G F + G K GV + D+ ++M+G
Sbjct: 31 AFAVAKELGGPIAVVKAQIHAGGRGKGSFKEPEAGEKGGVRIAKSFDDVRTFADEMLGRT 90
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++++ + I RE Y + DR + VI S GG DIE VA
Sbjct: 91 LVTVQTGPEGRVVKRLLIEEGAAIKRELYLSFLVDRATSRVAVIASTEGGMDIEEVAHDA 150
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + T ID G + +F G +K+A L
Sbjct: 151 PEKILTFSIDPASG-----------YSQFHG----------------------RKVAFEL 177
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
GD + + L+ F+ D +QLEINPL+ T++ +++ +DAK+NFD NA +R
Sbjct: 178 GLEGDQVKQCVKLIGSLYKAFVEKDMSQLEINPLIVTEKGDLVCLDAKLNFDSNALYRHP 237
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
I + ++ E DP EV AS+Y+L+YV +DG+IGCLVNGAGLAMATMDIIKL+G EPANFL
Sbjct: 238 EIVALRDLEEEDPAEVLASRYDLSYVKLDGSIGCLVNGAGLAMATMDIIKLYGSEPANFL 297
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II SD NVK ILVN+FGGI+ C IA+G++ A + L +PLVV
Sbjct: 298 DVGGGATKEKVTEAFKIILSDPNVKGILVNIFGGIMRCDIIAEGIIAAAREMSLKVPLVV 357
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
RLEGTNV+ GK I+ S L +I A +L +AA + A
Sbjct: 358 RLEGTNVELGKEIIRNSGLAVIPADNLADAAEKIVA 393
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
+ L +PLVVRLEGTNV+ GK I+ S L +I A +L +AA +
Sbjct: 347 REMSLKVPLVVRLEGTNVELGKEIIRNSGLAVIPADNLADAAEKIV 392
>gi|319649579|ref|ZP_08003735.1| succinyl-CoA synthetase subunit beta [Bacillus sp. 2_A_57_CT2]
gi|317398741|gb|EFV79423.1| succinyl-CoA synthetase subunit beta [Bacillus sp. 2_A_57_CT2]
Length = 386
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/388 (40%), Positives = 230/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N+ ++ +++G L+T
Sbjct: 31 AVEAAKELGTEVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYASEILGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA +TP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSRVVLMASEEGGTEIEEVAEQTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+T A+ IA +N+ + S
Sbjct: 144 IFKEEIDPVLGLTAFQARRIA--------------------FNINIPS------------ 171
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L +A + L+ ++ D + EINPLV T + +V+++DAK+NFD NA +RQK+I
Sbjct: 172 -KLVGQAVKFMMGLYRAYIEKDCSIAEINPLVVTGDGKVMALDAKLNFDGNALYRQKDIM 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ E D +E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDI+K +GG+PANFLDVG
Sbjct: 231 ALRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIVKHYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L++PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIATGVVEAAKQVGLTVPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL ES + +I A + + A
Sbjct: 351 GTNVELGKKILAESDIDIIAAESMADGA 378
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL ES + +I A + + A +
Sbjct: 329 ATGVVEAAKQVGLTVPLVVRLEGTNVELGKKILAESDIDIIAAESMADGAQKIV 382
>gi|339505143|ref|YP_004692563.1| malate--CoA ligase subunit beta [Roseobacter litoralis Och 149]
gi|338759136|gb|AEI95600.1| malate--CoA ligase subunit beta [Roseobacter litoralis Och 149]
Length = 399
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 233/422 (55%), Gaps = 48/422 (11%)
Query: 2 EMAFNQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGL 61
E + +ANF V + +S ++ AT ++L + +V+KAQI AGGRG
Sbjct: 5 EYQAKEVLANFGVTVPDGALAYSPEQ--------ATYRARELGGERWVVKAQIHAGGRGK 56
Query: 62 GHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETY 121
GV +N +I E M G K+IT QT G + +V V +V I RE Y
Sbjct: 57 A-------GGVKVCSNDIEIQKASEGMFGQKMITHQTGPEGKGIYRVYVEAAVPIDREIY 109
Query: 122 FCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEF 181
V DR +++ S GG +IE ++ K P + I ++ + EF
Sbjct: 110 LGFVLDRTTQRVMIVASAEGGMEIEEISEKRP-----------ESIVRAIVEPAVGLREF 158
Query: 182 QGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQL 241
Q ++IA L L + +Q + F +DAT +
Sbjct: 159 Q----------------------CRQIAFKLGVDAGLIQQMVRTLQGCYRAFTELDATMV 196
Query: 242 EINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMD 301
EINPLV T + VI++DAK+ FDDNA FR I + S+ DPRE A+ L+YVG+D
Sbjct: 197 EINPLVITTDNRVIALDAKMTFDDNALFRHPQISELRDKSQEDPRESRAADRGLSYVGLD 256
Query: 302 GNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILV 361
GNIGC+VNGAGLAMATMD IKL GGEPANFLD+GGG E + +AFR++ SD +V+ ILV
Sbjct: 257 GNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIGGGATPERVAKAFRLVLSDKSVQAILV 316
Query: 362 NVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
N+F GI C +A+G+V A K ++ +P++VRL GTNV+EG++IL +S LP+I A+ L+E
Sbjct: 317 NIFAGINRCDWVAEGVVQAIKEVQVDVPVIVRLAGTNVEEGQKILAQSGLPIIRAATLNE 376
Query: 422 AA 423
AA
Sbjct: 377 AA 378
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K ++ +P++VRL GTNV+EG++IL +S LP+I A+ L+EAA
Sbjct: 329 AEGVVQAIKEVQVDVPVIVRLAGTNVEEGQKILAQSGLPIIRAATLNEAA 378
>gi|224476371|ref|YP_002633977.1| succinyl-CoA synthetase subunit beta [Staphylococcus carnosus
subsp. carnosus TM300]
gi|254778452|sp|B9DPG0.1|SUCC_STACT RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|222420978|emb|CAL27792.1| putative succinyl-CoA synthetase, beta chain [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 388
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 230/392 (58%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELDTDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVEAYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAK+
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGADIKKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKS 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ FQ A++IA +
Sbjct: 141 PEKIFKETIDPVVGLAP-----------FQ----------------------ARRIAFNI 167
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KAA + L+N+F+ D + +EINPLV T E +V+++DAKINFDDNA FR K
Sbjct: 168 NIPKESINKAAKFLIALYNVFIEKDCSIVEINPLVLTGEGDVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMRCDIIAEGIVAAVKEVDLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+ GK+IL +S L + A+ + E A
Sbjct: 348 RLEGTNVELGKQILKDSGLAIEPAATMAEGAQ 379
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL +S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVDLTLPLVVRLEGTNVELGKQILKDSGLAIEPAATMAEGAQKIV 382
>gi|343087270|ref|YP_004776565.1| succinyl-CoA ligase (ADP-forming) subunit beta [Cyclobacterium
marinum DSM 745]
gi|342355804|gb|AEL28334.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Cyclobacterium
marinum DSM 745]
Length = 404
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 168/421 (39%), Positives = 240/421 (57%), Gaps = 43/421 (10%)
Query: 13 SYLVK-PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSG 71
SY VK V + + LE A+ T D YV+KAQI AGGRG G G
Sbjct: 14 SYGVKIQEGIVADSPEAALEAAKKLT---ADTGTSWYVLKAQIHAGGRGKGEIKETGSRG 70
Query: 72 VHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNIT-----RETYFCIVQ 126
V +++D+P + ++ L+T QT + G V K++VA+ V +E Y I+
Sbjct: 71 VVLAKSLEDVPEKAKDILNGTLVTIQTGEEGKLVKKILVAQDVYYPGNSEPKEYYLSILL 130
Query: 127 DRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLK 186
DR +++ S GG +IE +A TP + +D GI A+++A F+ L+
Sbjct: 131 DRATGSNIIMASTEGGVNIEEIAESTPEKIIKEWVDPMLGIQPYQARNVA----FKLGLE 186
Query: 187 AKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPL 246
A E+ K + L+ + + DA+Q EINP+
Sbjct: 187 GNAFKEMVKF-----------------------------IMALYAAYDASDASQFEINPV 217
Query: 247 VETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGC 306
++T + ++++VDAK+N DDNA +R K++ + ++ E DP EV+A++ LNYV +DGN+GC
Sbjct: 218 LKTSDDQILAVDAKVNLDDNALYRNKDLAAMRDLDEEDPFEVEAAESGLNYVKLDGNVGC 277
Query: 307 LVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGG 366
+VNGAGLAMATMD+IKL GGEPANFLDVGGG N +++ FRII D VK IL+NVFGG
Sbjct: 278 MVNGAGLAMATMDMIKLSGGEPANFLDVGGGANAQTVEAGFRIILKDPKVKAILINVFGG 337
Query: 367 IVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
IV C IA G+V A KS +S+P++VRL+GTN +EG +I+DES L + A L EAA
Sbjct: 338 IVRCDRIASGVVEAYKSIGDISVPIIVRLQGTNAEEGAKIIDESGLKVTSAITLKEAAEK 397
Query: 426 V 426
V
Sbjct: 398 V 398
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +V A KS +S+P++VRL+GTN +EG +I+DES L + A L EAA
Sbjct: 345 ASGVVEAYKSIGDISVPIIVRLQGTNAEEGAKIIDESGLKVTSAITLKEAA 395
>gi|338975708|ref|ZP_08631057.1| succinyl-CoA ligase (ADP-forming) beta chain [Bradyrhizobiaceae
bacterium SG-6C]
gi|338231017|gb|EGP06158.1| succinyl-CoA ligase (ADP-forming) beta chain [Bradyrhizobiaceae
bacterium SG-6C]
Length = 400
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 222/377 (58%), Gaps = 36/377 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQ 97
K L YV+K+QI AGGRG G F K GV +V ++ ++M+G L+T Q
Sbjct: 36 KSLPGPVYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVDEVAAFAKEMLGRTLVTVQ 95
Query: 98 TPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVK 157
T G VN++ + +I +E Y ++ DR + ++S GG DIE VA TP +
Sbjct: 96 TGPAGKQVNRLYIEDGSDIEKEFYLSMLVDRETSRIAYVVSTEGGMDIETVAHDTPEKIV 155
Query: 158 TIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD 217
T +D G+ ++ + +A L GD
Sbjct: 156 TFSVDPATGV---------------------------------MAHHGRHVAQALGLTGD 182
Query: 218 LKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQ 277
L +A+ +L+N F++ D LEINPLV T + E+ +DAKINFD NA +R +I
Sbjct: 183 LARQASILTAQLYNAFVTTDMAMLEINPLVVTRQGELRCLDAKINFDSNALYRHPDIVKL 242
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
+++E D +E++ASKY+LNY+ ++G IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG
Sbjct: 243 RDLTEEDEKEIEASKYDLNYIALEGTIGCMVNGAGLAMATMDIIKLYGATPANFLDVGGG 302
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
+E + AF+II+SD NVK ILVN+FGGI+ C +A+G+V A + L +PLVVRLEGT
Sbjct: 303 ATKEKVAAAFKIITSDPNVKGILVNIFGGIMRCDVVAEGVVAAVREVGLGVPLVVRLEGT 362
Query: 398 NVQEGKRILDESKLPLI 414
NV+ GK+++ ES L ++
Sbjct: 363 NVELGKKVIAESGLNVV 379
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
+ L +PLVVRLEGTNV+ GK+++ ES L ++
Sbjct: 347 REVGLGVPLVVRLEGTNVELGKKVIAESGLNVV 379
>gi|404418478|ref|ZP_11000245.1| succinyl-CoA synthetase subunit beta [Staphylococcus arlettae
CVD059]
gi|403489071|gb|EJY94649.1| succinyl-CoA synthetase subunit beta [Staphylococcus arlettae
CVD059]
Length = 388
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/394 (41%), Positives = 231/394 (58%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ + YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELSSEVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVESYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++ + + +I +E Y V DR + ++ S GGT+IE VAA T
Sbjct: 81 LVTHQTGPEGKEIKRLYIEEGCDIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAANT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVTGLAPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T + +V+++DAKINFDDNA FR K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTGDGDVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NV+ I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVQGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+EGK IL +S L + A+ + E A +
Sbjct: 348 RLEGTNVKEGKAILKDSGLAIEPAATMAEGAQKI 381
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+EGK IL +S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVKEGKAILKDSGLAIEPAATMAEGAQKIV 382
>gi|390944015|ref|YP_006407776.1| succinyl-CoA synthetase subunit beta [Belliella baltica DSM 15883]
gi|390417443|gb|AFL85021.1| succinyl-CoA synthetase, beta subunit [Belliella baltica DSM 15883]
Length = 403
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 233/418 (55%), Gaps = 43/418 (10%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKE----YVIKAQILAGGRGLGHFDNGFKSGVHFTNN 77
V + + E A K LN + YVIKAQI AGGRG G +GV
Sbjct: 17 VRIQEGIVAETPEAALEAAKKLNAETGTSWYVIKAQIHAGGRGKGKVQETDSNGVVLAKK 76
Query: 78 VQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNI-----TRETYFCIVQDRLHNG 132
++D+ + ++G L+T QT G VNKV++A+ V +E Y I+ DR
Sbjct: 77 LEDVAEKAKNILGGTLVTHQTGPEGKKVNKVLIAEDVYYPGDSEPKEYYLSILLDRAKGS 136
Query: 133 PVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATE 192
V++ S GG DIE VA P + ID G+ A+ +A F+ L+ A E
Sbjct: 137 NVIMASTEGGMDIEEVAENHPEKIIKEWIDPKVGLQGFQARKVA----FKLGLEGNAFKE 192
Query: 193 VQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDER 252
+ K + L+ + D++Q EINP+++T +
Sbjct: 193 MVKF-----------------------------ITALYAAYEGTDSSQFEINPVLKTSDN 223
Query: 253 EVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAG 312
++++VDAK+N DDNA +R K++ +++E DP EV+A + LNYV ++GN+GC+VNGAG
Sbjct: 224 KILAVDAKVNLDDNALYRHKDLADLRDLAEEDPLEVEAGESGLNYVKLEGNVGCMVNGAG 283
Query: 313 LAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCAT 372
LAMATMD+IKL GGEPANFLDVGGG N ++ FRII D NVK IL+NVFGGIV C
Sbjct: 284 LAMATMDMIKLSGGEPANFLDVGGGANATTVEAGFRIILKDPNVKAILINVFGGIVRCDR 343
Query: 373 IAKGLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
IA G+V A KS +S+P++VRL+GTN +EG RI+DES L + A L EAA V +
Sbjct: 344 IANGVVEAYKSIGDISVPIIVRLQGTNAEEGARIIDESGLKVSSAITLKEAAEKVKSA 401
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A KS +S+P++VRL+GTN +EG RI+DES L + A L EAA
Sbjct: 345 ANGVVEAYKSIGDISVPIIVRLQGTNAEEGARIIDESGLKVSSAITLKEAA 395
>gi|171921150|gb|ACB59226.1| succinyl-CoA synthetase beta chain [Advenella kashmirensis]
Length = 386
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 158/382 (41%), Positives = 226/382 (59%), Gaps = 40/382 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+V+KAQI A G GV ++ ++ + +++G +L+T QT G VN+
Sbjct: 43 WVVKAQIHA-------GGRGKGGGVKLAKSIDEVRQLSSEILGMQLVTHQTGPEGQKVNR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+++ + +I +E Y IV DR V+ S GG D+E VA KTP + + +D +G
Sbjct: 96 LLIEEGADIKKEYYVGIVTDRSSQRVCVMASSEGGMDVEEVAEKTPEKILKVFVDPAKGF 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
T+ A+++A +G A+ E KAA E Q
Sbjct: 156 TDDEARELA-----RGIGVPDASVE----------------------------KAAVEFQ 182
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
KL+ + D++ EINPL+ T ++I++DAK NFD NA FR I ++ E DP E
Sbjct: 183 KLYQAYWDTDSSLAEINPLILTGSGDIIALDAKFNFDSNALFRHPEIVEYRDLDEEDPAE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK++L Y+ +DGNIGCLVNGAGLAMATMD IKL GGEPANFLDVGGG E + +AF
Sbjct: 243 IEASKFDLAYIQLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATAEKVTEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+I+ + VK ILVN+FGGI+ C IA+G++ ACK+ LS+PLVVR++GTN + GK++L
Sbjct: 303 KIMLKNKEVKAILVNIFGGIMRCDVIAEGVIAACKAVNLSVPLVVRMKGTNEEMGKKMLA 362
Query: 408 ESKLPLIFASDLDEAASLVNAC 429
ES LP+I A + EAA+ V A
Sbjct: 363 ESGLPIISADTMAEAATKVVAA 384
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ ACK+ LS+PLVVR++GTN + GK++L ES LP+I A + EAA + A
Sbjct: 329 AEGVIAACKAVNLSVPLVVRMKGTNEEMGKKMLAESGLPIISADTMAEAATKVVAA 384
>gi|291279313|ref|YP_003496148.1| succinyl-CoA synthase subunit beta [Deferribacter desulfuricans
SSM1]
gi|290754015|dbj|BAI80392.1| succinyl-CoA synthase, beta subunit [Deferribacter desulfuricans
SSM1]
Length = 393
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 233/391 (59%), Gaps = 43/391 (10%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
+ A + DL+ +V+KAQI AGGRG GV + +++ I ++M+G KL
Sbjct: 33 KAAQQLGGDLDV--WVVKAQIHAGGRGKA-------GGVKLARSTEEVGLIAKQMLGSKL 83
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+T QT G V+++ + + VNI +E Y +V DR PV++ S GG +IE VAA++P
Sbjct: 84 VTHQTGPEGKVVHRIYIEEGVNIEKEFYLGMVLDRSLEMPVMMASSEGGVEIEEVAARSP 143
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ + I+ G F F G A ++L N F+S
Sbjct: 144 EKIIKVAINPTIG-----------FQGFHGRKLAFGLGLPRELVNKFISF---------- 182
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
Q ++N+++ DA +EINPLV T E + I++DAK++FDDNA +RQ
Sbjct: 183 ------------AQAIYNVYMDYDANLIEINPLVLTKEGKFIALDAKMSFDDNALYRQPE 230
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
I + +++E +P E++A+KY L+YV +DGN+GC+VNGAGLAMATMDIIK GG PANFLD
Sbjct: 231 ILAMRDLTEEEPTEIEAAKYGLSYVKLDGNVGCMVNGAGLAMATMDIIKHEGGRPANFLD 290
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG + E++ + F II D NVK I VN+FGGIV C +A G++ A K+ ++++P+VVR
Sbjct: 291 VGGGASAETVAKGFEIILRDPNVKSIFVNIFGGIVRCDRVANGIIEATKATQVNVPVVVR 350
Query: 394 LEGTNVQEGKRILDESKLP-LIFASDLDEAA 423
L+GTN +E IL+ S + LI A+DL + A
Sbjct: 351 LDGTNAEEAAEILNNSGIKQLIAATDLKDGA 381
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLP-LIFASDLDEAA 519
A ++ A K+ ++++P+VVRL+GTN +E IL+ S + LI A+DL + A
Sbjct: 331 ANGIIEATKATQVNVPVVVRLDGTNAEEAAEILNNSGIKQLIAATDLKDGA 381
>gi|242373538|ref|ZP_04819112.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
M23864:W1]
gi|242348901|gb|EES40503.1| succinyl-CoA synthetase subunit beta [Staphylococcus epidermidis
M23864:W1]
Length = 388
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 230/392 (58%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELDSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAA T
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAANT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA +N+ +
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIA--------------------FNINIPK--------- 171
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KA + L+N+F+ D + +EINPLV T + +V+++DAK+NFDDNA FR K
Sbjct: 172 ----ESIGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIVELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+ GK IL++S L + A+ + E A
Sbjct: 348 RLEGTNVERGKEILNDSGLAIEPAATMAEGAQ 379
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL++S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILNDSGLAIEPAATMAEGAQKIV 382
>gi|410478381|ref|YP_006766018.1| succinyl-CoA synthetase subunit beta [Leptospirillum ferriphilum
ML-04]
gi|424866330|ref|ZP_18290171.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum sp. Group II
'C75']
gi|124515902|gb|EAY57411.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum rubarum]
gi|387223127|gb|EIJ77499.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum sp. Group II
'C75']
gi|406773633|gb|AFS53058.1| succinyl-CoA synthetase, beta subunit [Leptospirillum ferriphilum
ML-04]
Length = 396
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 223/387 (57%), Gaps = 41/387 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+ +KAQI AGGRG GV ++IP ++ +++G L+T QT G V K
Sbjct: 50 WAVKAQIHAGGRGKA-------GGVKLARKSEEIPDLVSQILGKTLVTHQTGPEGKKVLK 102
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V + + NI RE Y +V DR +I S GG +IE VA K P + + +D +G
Sbjct: 103 VWIEEGSNIAREFYLGVVVDRTTRRMTLIASTEGGMEIEEVAEKHPEKIFHLALDPLEGY 162
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
+ + + ++ FL L S+ Q + V+
Sbjct: 163 SPYIGRRVSQFL------------------GLPFSTQTQMV---------------NIVR 189
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L + F DA+ +EINPLV T E +I++DAK+ FDDNA RQ I ++SE +P E
Sbjct: 190 DLLDFFQRRDASMVEINPLVLTREDRLIALDAKVGFDDNAVGRQPAIRGLRDLSEENPLE 249
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASKYNLNYV +DGNI C+VNGAGLAMATMD+I L GG PANFLDVGGG ++E++ QAF
Sbjct: 250 IEASKYNLNYVKLDGNIACMVNGAGLAMATMDVIALAGGSPANFLDVGGGASKETVEQAF 309
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
RII D +VK I VN+FGGIV C IA G++ A + K++IPLVVRL+GTN +EG+ +L
Sbjct: 310 RIILGDPHVKGIFVNIFGGIVRCERIAGGIIAAAQDVKITIPLVVRLQGTNAKEGREMLR 369
Query: 408 ESKLPLIFASDLDEAAS-LVNACKSFK 433
S L + A +L E A +V A K K
Sbjct: 370 SSGLAIQVAEELYEGAEKIVLAVKGDK 396
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + K++IPLVVRL+GTN +EG+ +L S L + A +L E A +LA
Sbjct: 336 AGGIIAAAQDVKITIPLVVRLQGTNAKEGREMLRSSGLAIQVAEELYEGAEKIVLA 391
>gi|228992564|ref|ZP_04152491.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
pseudomycoides DSM 12442]
gi|228998612|ref|ZP_04158199.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
Rock3-17]
gi|229006112|ref|ZP_04163800.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
Rock1-4]
gi|228755188|gb|EEM04545.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
Rock1-4]
gi|228761080|gb|EEM10039.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
Rock3-17]
gi|228767198|gb|EEM15834.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
pseudomycoides DSM 12442]
Length = 386
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ ++ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAYIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLEEEDPKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|429769844|ref|ZP_19301935.1| succinate-CoA ligase, beta subunit [Brevundimonas diminuta 470-4]
gi|429186165|gb|EKY27121.1| succinate-CoA ligase, beta subunit [Brevundimonas diminuta 470-4]
Length = 396
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 226/392 (57%), Gaps = 36/392 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
D V + A A K L YV+K+QI AGGRG G F K GV ++++
Sbjct: 20 ADGVAITSADQAEAAAKQLPGPLYVVKSQIHAGGRGKGKFKELGADAKGGVRLAFSIEEA 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
++M+G+ L+T QT + G VN++ + +I RE Y ++ DR ++S G
Sbjct: 80 VAHAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYCSLLVDRSVGQTAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA TP + TI I+ G+T I LE GD AA + + L+ +
Sbjct: 140 GMDIEEVAHATPEKIHTIAINPEAGVTAENVAAINAALELTGD----AAEDGKSLFPI-- 193
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L+ F+ D LEINPL+ + + +DAK+
Sbjct: 194 ---------------------------LYKAFVEKDMDMLEINPLIVMENGHLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA +R ++I + + +E D +E++ASK++L YV +DGNIGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALYRHEDIRALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANF DVGGG ++E + AF+II++D V+ ILVN+FGGI+ C IA+G+V A
Sbjct: 287 KLYGKEPANFCDVGGGASKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVVAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 413
K L +PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 347 KEVGLKVPLVVRLEGTNVELGKKILNESGLAI 378
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A +V A K L +PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAI 378
>gi|294500951|ref|YP_003564651.1| succinate-CoA ligase subunit beta [Bacillus megaterium QM B1551]
gi|295706297|ref|YP_003599372.1| succinate-CoA ligase subunit beta [Bacillus megaterium DSM 319]
gi|294350888|gb|ADE71217.1| succinate-CoA ligase, beta subunit [Bacillus megaterium QM B1551]
gi|294803956|gb|ADF41022.1| succinate-CoA ligase, beta subunit [Bacillus megaterium DSM 319]
Length = 386
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N+ ++ + ++G L+T
Sbjct: 31 AVEAAKELGSQVSVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAQDILGKTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V +++V + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLVEEGCDIKKEYYIGLVLDRATSQVVLMGSEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +D G+ FQ A+++A +
Sbjct: 144 IFKEYVDPAIGLQA-----------FQ----------------------ARRLAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L KA + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +RQK+I
Sbjct: 171 KELVGKAVKFMTGLYTVFVEKDCSIAEINPLVVTGDGDVMALDAKLNFDSNALYRQKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDIIK +GG+PANFLDVG
Sbjct: 231 EYRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K LS+PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIATGVVEATKQVGLSLPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK IL +S L + A + + A
Sbjct: 351 GTNVELGKEILQKSGLNITAAESMADGA 378
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV+ GK IL +S L + A + + A +
Sbjct: 329 ATGVVEATKQVGLSLPLVVRLEGTNVELGKEILQKSGLNITAAESMADGAQKIV 382
>gi|302036210|ref|YP_003796532.1| succinyl-CoA synthetase subunit beta [Candidatus Nitrospira
defluvii]
gi|300604274|emb|CBK40606.1| Succinyl-CoA synthetase, beta subunit [Candidatus Nitrospira
defluvii]
Length = 392
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 219/383 (57%), Gaps = 37/383 (9%)
Query: 42 DLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKT 101
+LN +V+KAQI AGGRG GV T + I +++IG LIT QT
Sbjct: 37 ELNTPVFVVKAQIHAGGRGKA-------GGVKITKEKGAVAGIAKELIGKTLITHQTGPK 89
Query: 102 GINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPI 161
G V+++++ + NI +E Y I+ DR P I S GG +IE VA KTP + I
Sbjct: 90 GRKVHRLLLEEGANIAKELYLSILVDRDTGWPTFIASTEGGMEIEEVAEKTPEKIIKEAI 149
Query: 162 DVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAK 221
D G +++A L Q A VQ L NL+
Sbjct: 150 DPAVGFQGHNGRNVAFALGLQAMEPAVINPFVQMLGNLY--------------------- 188
Query: 222 AATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVS 281
LF+ A +EINPL+ T E+ ++++D K++FDDN F+ ++ +++
Sbjct: 189 ---------RLFMEKHAALVEINPLIITKEKTLVALDGKVSFDDNGVFKHDDVQKMRDLN 239
Query: 282 ESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEE 341
E DP E++A+ NLNYV +DGNIGC+VNGAGLAMATMD+IKL G EPANFLDVGGG ++
Sbjct: 240 EEDPLEIEATANNLNYVKLDGNIGCMVNGAGLAMATMDVIKLAGSEPANFLDVGGGATKD 299
Query: 342 SIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQE 401
++ FRI+ D NVK I +N+FGGIV C IA G++ A K K+++PLVVRL+GTN E
Sbjct: 300 TVAAGFRILLKDPNVKGIFINIFGGIVRCERIAHGVIEAAKEVKITVPLVVRLQGTNADE 359
Query: 402 GKRILDESKLPLIFASDLDEAAS 424
G+++L ES L L A+DL EAA
Sbjct: 360 GRKLLAESGLKLEVANDLWEAAQ 382
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K K+++PLVVRL+GTN EG+++L ES L L A+DL EAA
Sbjct: 332 AHGVIEAAKEVKITVPLVVRLQGTNADEGRKLLAESGLKLEVANDLWEAA 381
>gi|384045197|ref|YP_005493214.1| succinyl-CoA synthetase subunit beta [Bacillus megaterium WSH-002]
gi|345442888|gb|AEN87905.1| Succinyl-CoA synthetase, beta subunit [Bacillus megaterium WSH-002]
Length = 392
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N+ ++ + ++G L+T
Sbjct: 37 AVEAAKELGSQVSVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAQDILGKTLVT 89
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V +++V + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 90 HQTGPEGKEVKRLLVEEGCDIKKEYYIGLVLDRATSQVVLMGSEEGGTEIEEVAEKTPEK 149
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +D G+ FQ A+++A +
Sbjct: 150 IFKEYVDPAIGLQA-----------FQ----------------------ARRLAFNINIP 176
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L KA + L+ +F+ D + EINPLV T + +V+++DAK+NFD NA +RQK+I
Sbjct: 177 KELVGKAVKFMTGLYTVFVEKDCSIAEINPLVVTGDGDVMALDAKLNFDSNALYRQKDIL 236
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDIIK +GG+PANFLDVG
Sbjct: 237 EYRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYGGDPANFLDVG 296
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K LS+PLVVRLE
Sbjct: 297 GGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIATGVVEATKQVGLSLPLVVRLE 356
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK IL +S L + A + + A
Sbjct: 357 GTNVELGKEILQKSGLNITAAESMADGA 384
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNV+ GK IL +S L + A + + A +
Sbjct: 335 ATGVVEATKQVGLSLPLVVRLEGTNVELGKEILQKSGLNITAAESMADGAQKIV 388
>gi|402820258|ref|ZP_10869825.1| hypothetical protein IMCC14465_10590 [alpha proteobacterium
IMCC14465]
gi|402511001|gb|EJW21263.1| hypothetical protein IMCC14465_10590 [alpha proteobacterium
IMCC14465]
Length = 389
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 212/344 (61%), Gaps = 33/344 (9%)
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
++M+G LIT QT G V +V V + I RE Y I+ DR + I S GG DI
Sbjct: 74 DRMLGMTLITHQTGPEGKEVGRVYVEEGSEIDRELYLSILVDRATSMVSFIASTEGGMDI 133
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VAA+TP + T+ +D G+T++ ++IA L+ G +V++ L
Sbjct: 134 EEVAAETPEKILTVGVDPVAGMTDANGREIAAALKLTGH-------QVEQCVAL------ 180
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
V+ L+ F+ D + LEINPLV ++I +DAK+NFD
Sbjct: 181 --------------------VKNLYKAFVETDMSLLEINPLVVNGAGDLICLDAKVNFDS 220
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA +R +I ++SE DP EV+ASKY+L+YV +DG+IGC+VNGAGLAMATMDIIKL+G
Sbjct: 221 NALYRHDDIVELRDLSEEDPAEVEASKYDLSYVKLDGSIGCMVNGAGLAMATMDIIKLYG 280
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
EPANFLDVGGG +E + +AF+II SD NVK ILVN+FGGI+ C IA+G++ A
Sbjct: 281 EEPANFLDVGGGATKEKVTEAFKIILSDQNVKGILVNIFGGIMRCDIIAEGVIAAASELA 340
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNAC 429
LS+PLVVRLEGTNV++GK I+ S L +I A +L++AA + A
Sbjct: 341 LSVPLVVRLEGTNVEQGKEIMAASGLAIIPADNLEDAAEKIVAA 384
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A LS+PLVVRLEGTNV++GK I+ S L +I A +L++AA + A
Sbjct: 329 AEGVIAAASELALSVPLVVRLEGTNVEQGKEIMAASGLAIIPADNLEDAAEKIVAA 384
>gi|229019031|ref|ZP_04175872.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AH1273]
gi|229025277|ref|ZP_04181697.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AH1272]
gi|423389857|ref|ZP_17367083.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG1X1-3]
gi|423418257|ref|ZP_17395346.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG3X2-1]
gi|228736030|gb|EEL86605.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AH1272]
gi|228742271|gb|EEL92430.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AH1273]
gi|401106530|gb|EJQ14491.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG3X2-1]
gi|401641948|gb|EJS59665.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG1X1-3]
Length = 386
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 229/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTEVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L++ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|441499025|ref|ZP_20981215.1| Succinyl-CoA ligase [ADP-forming] beta chain [Fulvivirga
imtechensis AK7]
gi|441437270|gb|ELR70624.1| Succinyl-CoA ligase [ADP-forming] beta chain [Fulvivirga
imtechensis AK7]
Length = 403
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 236/409 (57%), Gaps = 43/409 (10%)
Query: 28 VCLEDARTATNILKDLNFKE----YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPP 83
+ + A A N K+L+ + YVIKAQI AGGRG G +GV ++ +
Sbjct: 23 IVADTADKALNAAKELHSETGTDWYVIKAQIHAGGRGKGKIQETGSNGVVLAKSLDQVTE 82
Query: 84 ILEKMIGHKLITKQTPKTGINVNKVMVAKSVNI-----TRETYFCIVQDRLHNGPVVIIS 138
+ +IG L+T QT G VNKV++A+ V +E Y I+ DR + V++ S
Sbjct: 83 KAKNIIGGTLVTHQTGDEGKKVNKVLIAEDVYYPGDSEPKEFYLSILLDRAKSCNVIMAS 142
Query: 139 PSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWN 198
GG DIE VA KTP + ID G+ A+ IA L +G N
Sbjct: 143 TEGGMDIEEVAEKTPEKIVKEWIDPAVGLQGFQARKIAFALGLEG--------------N 188
Query: 199 LFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVD 258
F + ++F + L+ + + D++ EINP+++T + ++++VD
Sbjct: 189 AF--------KEMVKF-----------IYALYKAYEATDSSMFEINPVLKTSDNKILAVD 229
Query: 259 AKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATM 318
AK+N DDNA FR K++ ++SE DP EV+A + L+YV +DGN+GC+VNGAGLAMATM
Sbjct: 230 AKVNLDDNALFRHKDLAELRDLSEEDPAEVEAGRSGLSYVKLDGNVGCMVNGAGLAMATM 289
Query: 319 DIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLV 378
DIIKL GGEPANFLDVGGG N E++ FRII D NVK IL+N+FGGIV C +A G+V
Sbjct: 290 DIIKLSGGEPANFLDVGGGANAETVEAGFRIILKDPNVKAILINIFGGIVRCDRVANGVV 349
Query: 379 NACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
A K + IP++VRL+GTN +EG RI++ES L + A L +AA+ V
Sbjct: 350 EAYKKIGNIDIPIIVRLQGTNAEEGARIIEESGLKVSSAILLKDAATKV 398
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K + IP++VRL+GTN +EG RI++ES L + A L +AA
Sbjct: 345 ANGVVEAYKKIGNIDIPIIVRLQGTNAEEGARIIEESGLKVSSAILLKDAA 395
>gi|254420526|ref|ZP_05034250.1| succinyl-CoA synthetase, beta subunit subfamily [Brevundimonas sp.
BAL3]
gi|196186703|gb|EDX81679.1| succinyl-CoA synthetase, beta subunit subfamily [Brevundimonas sp.
BAL3]
Length = 396
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 229/392 (58%), Gaps = 36/392 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
+ V + A A K L YV+K+QI AGGRG G F K GV +++D+
Sbjct: 20 AEGVPITSADQAEAAAKQLPGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAFSIEDV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
++M+G+ L+T QT + G VN++ + +I RE Y ++ DR + ++S G
Sbjct: 80 VKNAKEMLGNTLVTAQTGEAGKQVNRLYIEDGADIARELYCSLLVDRQYGRVAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA TP ++TI ID G+TE+ D+A G L AA + + L+
Sbjct: 140 GMDIEAVAHDTPEKIQTIVIDPATGVTEA---DVAAINAAYG-LTGDAAEDGKSLF---- 191
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L+ F+ D LE+NPL+ + + +DAK+
Sbjct: 192 -------------------------PALYKAFVEKDMAMLEVNPLIVMENGRLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR +++ + + +E D +E++ASK++L YV +DGNIGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHEDMRALRDETEEDAKEIEASKWDLAYVSLDGNIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANF DVGGG +E + AF+II++D NV+ ILVN+FGGI+ C IA+G+V A
Sbjct: 287 KLYGKEPANFCDVGGGAGKEKVAAAFKIITADPNVQGILVNIFGGIMKCDVIAEGVVAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 413
K L +PLVVRLEGTN + GK+IL+ES L +
Sbjct: 347 KEVGLKVPLVVRLEGTNAELGKKILNESGLTI 378
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A +V A K L +PLVVRLEGTN + GK+IL+ES L +
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNAELGKKILNESGLTI 378
>gi|414168074|ref|ZP_11424278.1| succinyl-CoA ligase [ADP-forming] subunit beta [Afipia
clevelandensis ATCC 49720]
gi|410888117|gb|EKS35921.1| succinyl-CoA ligase [ADP-forming] subunit beta [Afipia
clevelandensis ATCC 49720]
Length = 400
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/377 (41%), Positives = 222/377 (58%), Gaps = 36/377 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQ 97
K L YV+K+QI AGGRG G F + GV +V ++ ++M+G L+T Q
Sbjct: 36 KSLPGPVYVVKSQIHAGGRGKGKFKELPADARGGVRLAKSVDEVAAFAKEMLGRTLVTVQ 95
Query: 98 TPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVK 157
T G VN++ + +I +E Y ++ DR + ++S GG DIE VA TP +
Sbjct: 96 TGPAGKQVNRLYIEDGSDIEKEFYLSMLVDRETSRIAYVVSTEGGMDIEKVAHDTPEKIV 155
Query: 158 TIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGD 217
T +D G+ ++ + +A L GD
Sbjct: 156 TFSVDPATGV---------------------------------MAHHGRHVAQALGLTGD 182
Query: 218 LKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQ 277
L +A+ +L+N F++ D LEINPLV T + E+ +DAKINFD NA +R +I
Sbjct: 183 LARQASILTAQLYNAFVTTDMAMLEINPLVVTKQGELRCLDAKINFDSNALYRHPDIVKL 242
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
+++E D +E++ASKY+LNY+ ++G IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG
Sbjct: 243 RDLTEEDEKEIEASKYDLNYIALEGTIGCMVNGAGLAMATMDIIKLYGATPANFLDVGGG 302
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
+E + AF+II+SD NVK ILVN+FGGI+ C +A+G+V A + L +PLVVRLEGT
Sbjct: 303 ATKEKVAAAFKIITSDPNVKGILVNIFGGIMRCDVVAEGVVAAVREVGLGVPLVVRLEGT 362
Query: 398 NVQEGKRILDESKLPLI 414
NV+ GK+++ ES L ++
Sbjct: 363 NVELGKKVIAESGLNVV 379
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
+ L +PLVVRLEGTNV+ GK+++ ES L ++
Sbjct: 347 REVGLGVPLVVRLEGTNVELGKKVIAESGLNVV 379
>gi|218898989|ref|YP_002447400.1| succinyl-CoA synthetase subunit beta [Bacillus cereus G9842]
gi|226734922|sp|B7IUJ5.1|SUCC_BACC2 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|218541995|gb|ACK94389.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
G9842]
Length = 386
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 226/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNIHIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T E +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|256425554|ref|YP_003126207.1| succinyl-CoA synthetase subunit beta [Chitinophaga pinensis DSM
2588]
gi|256040462|gb|ACU64006.1| succinyl-CoA synthetase, beta subunit [Chitinophaga pinensis DSM
2588]
Length = 404
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 225/385 (58%), Gaps = 39/385 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG G + GV N +D+ I ++G L+T QT + G VNKV
Sbjct: 48 VVKAQIHAGGRGKGTIRGKEQRGVAVGKNAEDVKTIAGNILGGVLVTIQTGEAGKLVNKV 107
Query: 109 MVAKSV-----NITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
+VA+ V N +E Y I+ DR V++ S GG DIE VA TP
Sbjct: 108 LVAQDVYYPGPNPIKEFYLSILLDRAKGQNVIMYSTEGGMDIEEVAHNTP---------- 157
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
I + L Q FQ A+KIA G+
Sbjct: 158 -DKIFKELVQPNTTLQPFQ----------------------ARKIAFNFGLSGEAFKNMV 194
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
V L+N ++ +DA LEINPL +T + ++I+VD K+N DDNA R ++ + +++E
Sbjct: 195 KFVTNLYNAYVGLDAAMLEINPLFKTSDEKIIAVDCKLNLDDNALMRHADLEALRDINEE 254
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DP EV+A K+NLNYV +DGN+GC+VNGAGLAMATMD+IKL GGEPANFLDVGG N +++
Sbjct: 255 DPTEVEAGKFNLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGGEPANFLDVGGTANAQTV 314
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQEG 402
FRII D VK IL+N+FGGIV C +A+G+++A +S + +P++VRL+GTN +E
Sbjct: 315 EAGFRIILKDPKVKAILINIFGGIVRCDRVAQGVIDAYQSIGDIKVPIIVRLQGTNAEEA 374
Query: 403 KRILDESKLPLIFASDLDEAASLVN 427
K++++ES L + A L EAA+LVN
Sbjct: 375 KKLIEESGLKVQSAILLSEAAALVN 399
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +++A +S + +P++VRL+GTN +E K++++ES L + A L EAA
Sbjct: 345 AQGVIDAYQSIGDIKVPIIVRLQGTNAEEAKKLIEESGLKVQSAILLSEAA 395
>gi|339008728|ref|ZP_08641301.1| succinyl-CoA ligase (ADP-forming) subunit beta [Brevibacillus
laterosporus LMG 15441]
gi|421872078|ref|ZP_16303697.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brevibacillus
laterosporus GI-9]
gi|338774528|gb|EGP34058.1| succinyl-CoA ligase (ADP-forming) subunit beta [Brevibacillus
laterosporus LMG 15441]
gi|372458690|emb|CCF13246.1| succinyl-CoA ligase [ADP-forming] subunit beta [Brevibacillus
laterosporus GI-9]
Length = 386
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/383 (42%), Positives = 225/383 (58%), Gaps = 40/383 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+L K V+KAQI AGGRG GV ++ ++ +++G L+T QT
Sbjct: 36 KELGTKVCVVKAQIHAGGRGKA-------GGVKVAKSLDEVKAYASEILGKTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++++ + +I +E Y +V DR + V++ S GGT+IE VAA TP +
Sbjct: 89 EGKEVKRLLIEEGCDIKKEYYLGLVLDRATSRVVLMGSEEGGTEIEEVAAATPEKIFKEY 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID G+T FQ A+++A + +L
Sbjct: 149 IDPVVGLTP-----------FQ----------------------ARRLAFNINIPTELIN 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
KAA + L+ F+ D + EINPLV T + V+++DAK+NFD NA +R K+I ++
Sbjct: 176 KAAAFMTALYTAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRHKDIMDYRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDIIK GG+PANFLDVGGG
Sbjct: 236 EEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHFGGDPANFLDVGGGATA 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L +PLVVRLEGTNV+
Sbjct: 296 EKVTEAFKIILSDKNVKGIFVNIFGGIMKCDIIATGVVEAAKQLSLEVPLVVRLEGTNVE 355
Query: 401 EGKRILDESKLPLIFASDLDEAA 423
GK+IL +S L + A + + A
Sbjct: 356 LGKQILKDSGLNITSADSMADGA 378
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV+ GK+IL +S L + A + + A +
Sbjct: 329 ATGVVEAAKQLSLEVPLVVRLEGTNVELGKQILKDSGLNITSADSMADGAQKIV 382
>gi|423498471|ref|ZP_17475088.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
CER074]
gi|401160520|gb|EJQ67898.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
CER074]
Length = 386
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 229/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTEVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPTVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L++ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRNKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLEEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|163941574|ref|YP_001646458.1| succinyl-CoA synthetase subunit beta [Bacillus weihenstephanensis
KBAB4]
gi|229013019|ref|ZP_04170184.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
DSM 2048]
gi|229061439|ref|ZP_04198784.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AH603]
gi|229134644|ref|ZP_04263453.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BDRD-ST196]
gi|229168575|ref|ZP_04296298.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AH621]
gi|423367880|ref|ZP_17345312.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD142]
gi|423452863|ref|ZP_17429716.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG5X1-1]
gi|423470050|ref|ZP_17446794.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG6O-2]
gi|423489012|ref|ZP_17465694.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BtB2-4]
gi|423494737|ref|ZP_17471381.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
CER057]
gi|423511870|ref|ZP_17488401.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuA2-1]
gi|423518526|ref|ZP_17495007.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuA2-4]
gi|423522334|ref|ZP_17498807.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuA4-10]
gi|423558601|ref|ZP_17534903.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
MC67]
gi|423592168|ref|ZP_17568199.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD048]
gi|423598853|ref|ZP_17574853.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD078]
gi|423661324|ref|ZP_17636493.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VDM022]
gi|423669410|ref|ZP_17644439.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VDM034]
gi|423674411|ref|ZP_17649350.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VDM062]
gi|226734925|sp|A9VT74.1|SUCC_BACWK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|163863771|gb|ABY44830.1| succinyl-CoA synthetase, beta subunit [Bacillus weihenstephanensis
KBAB4]
gi|228614981|gb|EEK72083.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AH621]
gi|228648690|gb|EEL04716.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BDRD-ST196]
gi|228717862|gb|EEL69510.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AH603]
gi|228748273|gb|EEL98133.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus mycoides
DSM 2048]
gi|401082741|gb|EJP91006.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD142]
gi|401139422|gb|EJQ46984.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG5X1-1]
gi|401150830|gb|EJQ58282.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
CER057]
gi|401160734|gb|EJQ68109.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuA2-4]
gi|401175028|gb|EJQ82231.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuA4-10]
gi|401191869|gb|EJQ98891.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
MC67]
gi|401232301|gb|EJR38803.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD048]
gi|401237123|gb|EJR43580.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD078]
gi|401298537|gb|EJS04137.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VDM034]
gi|401301365|gb|EJS06954.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VDM022]
gi|401309962|gb|EJS15295.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VDM062]
gi|402432260|gb|EJV64319.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BtB2-4]
gi|402437302|gb|EJV69326.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG6O-2]
gi|402450131|gb|EJV81965.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuA2-1]
Length = 386
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 229/388 (59%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTEVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L++ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRNKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLEEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|408675144|ref|YP_006874892.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Emticicia
oligotrophica DSM 17448]
gi|387856768|gb|AFK04865.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Emticicia
oligotrophica DSM 17448]
Length = 406
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/389 (42%), Positives = 228/389 (58%), Gaps = 39/389 (10%)
Query: 44 NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
N K V+K+QI AGGRG G+ + GV + D+ I ++G+ L+T QT G
Sbjct: 43 NSKFAVVKSQIHAGGRGKGNIVGSEQRGVQLAKSADDVQRISTNLLGNVLVTIQTGAEGK 102
Query: 104 NVNKVMVAKSVNI-----TRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKT 158
VNKV+VA+ +E Y I+ DR V++ S GG DIE VA P +
Sbjct: 103 KVNKVLVAEDAYYPGESEPKEYYMGILLDRAKGCNVIMASTEGGMDIEEVAEHHPEKIFK 162
Query: 159 IPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDL 218
+D G+ A+ IAD L G A E+ K F+SS
Sbjct: 163 EWVDPRVGLQPFQARKIADKLGLTG----TANKEMVK----FVSS--------------- 199
Query: 219 KAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQN 278
L+ ++ D++ EINP+++T + ++++VDAK+N DDNA +R ++ +
Sbjct: 200 ----------LYQAYVESDSSMFEINPVLKTSDNKILAVDAKVNLDDNALYRHADLAAMR 249
Query: 279 EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGV 338
+ SE DP EV+AS+ +LNYV +DGN+GC+VNGAGLAMATMDIIKL GGEPANFLDVGGG
Sbjct: 250 DKSEEDPLEVEASESDLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGGEPANFLDVGGGA 309
Query: 339 NEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGT 397
N +++ FRII D NVK IL+N+FGGIV C +A G+V A K+ ++ +P++VRL+GT
Sbjct: 310 NAKTVEAGFRIILKDPNVKAILINIFGGIVRCDRVANGVVEAYKAIGEIPVPIIVRLQGT 369
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
N EG +I+DES L + A L EAA LV
Sbjct: 370 NAAEGAKIIDESGLKVYSAIALKEAAELV 398
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K+ ++ +P++VRL+GTN EG +I+DES L + A L EAA
Sbjct: 345 ANGVVEAYKAIGEIPVPIIVRLQGTNAAEGAKIIDESGLKVYSAIALKEAA 395
>gi|228940924|ref|ZP_04103483.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228973853|ref|ZP_04134429.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228980443|ref|ZP_04140753.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis Bt407]
gi|384187896|ref|YP_005573792.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
serovar chinensis CT-43]
gi|410676210|ref|YP_006928581.1| succinyl-CoA ligase subunit beta [Bacillus thuringiensis Bt407]
gi|423385339|ref|ZP_17362595.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG1X1-2]
gi|423528303|ref|ZP_17504748.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuB1-1]
gi|452200275|ref|YP_007480356.1| Succinyl-CoA ligase [ADP-forming] beta chain [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|228779263|gb|EEM27520.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis Bt407]
gi|228785878|gb|EEM33881.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818760|gb|EEM64826.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326941605|gb|AEA17501.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
serovar chinensis CT-43]
gi|401635395|gb|EJS53150.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG1X1-2]
gi|402451966|gb|EJV83785.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuB1-1]
gi|409175339|gb|AFV19644.1| succinyl-CoA ligase subunit beta [Bacillus thuringiensis Bt407]
gi|452105668|gb|AGG02608.1| Succinyl-CoA ligase [ADP-forming] beta chain [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 386
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 226/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T E +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|302381585|ref|YP_003817408.1| succinyl-CoA synthetase subunit beta [Brevundimonas subvibrioides
ATCC 15264]
gi|302192213|gb|ADK99784.1| succinyl-CoA synthetase, beta subunit [Brevundimonas subvibrioides
ATCC 15264]
Length = 396
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 221/369 (59%), Gaps = 36/369 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V++ ++M+G+ L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAFSVEEAVAHAKEMLGNTLVTAQTGDAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR H ++S GG DIE VA TP ++TI ID
Sbjct: 103 VNRLYIEDGADIERELYCSLLVDRAHGRIAYVVSTEGGMDIEAVAHDTPDKIQTIVIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+TE+ D+A G L AA + + L+ +
Sbjct: 163 TGVTEA---DVAAINAAYG-LTGAAAEDGKSLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D LE+NPL+ + + +DAK++FD NA FR ++I + + +E D
Sbjct: 194 ----LYKAFVETDMDMLEVNPLIVMKDGHLRVLDAKVSFDGNALFRHEDIKTLRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANF DVGGG ++ +
Sbjct: 250 AKEIEASKWDLAYVSLDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKDKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NV+ ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTN + GK+
Sbjct: 310 AAFKIITADPNVQGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLEGTNAELGKK 369
Query: 405 ILDESKLPL 413
IL+ES L +
Sbjct: 370 ILNESGLAI 378
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A +V A K L +PLVVRLEGTN + GK+IL+ES L +
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNAELGKKILNESGLAI 378
>gi|229098305|ref|ZP_04229252.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock3-29]
gi|229104398|ref|ZP_04235067.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock3-28]
gi|229117322|ref|ZP_04246700.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock1-3]
gi|407706295|ref|YP_006829880.1| phage head-tail adaptor [Bacillus thuringiensis MC28]
gi|423378325|ref|ZP_17355609.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG1O-2]
gi|423441433|ref|ZP_17418339.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG4X2-1]
gi|423448341|ref|ZP_17425220.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG5O-1]
gi|423464507|ref|ZP_17441275.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG6O-1]
gi|423533849|ref|ZP_17510267.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuB2-9]
gi|423540882|ref|ZP_17517273.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuB4-10]
gi|423623088|ref|ZP_17598866.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD148]
gi|228666222|gb|EEL21686.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock1-3]
gi|228679096|gb|EEL33304.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock3-28]
gi|228685203|gb|EEL39134.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock3-29]
gi|401128935|gb|EJQ36618.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG5O-1]
gi|401172070|gb|EJQ79291.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuB4-10]
gi|401259861|gb|EJR66035.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD148]
gi|401636591|gb|EJS54345.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG1O-2]
gi|402418094|gb|EJV50394.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG4X2-1]
gi|402420774|gb|EJV53045.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG6O-1]
gi|402464068|gb|EJV95768.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuB2-9]
gi|407383980|gb|AFU14481.1| Succinyl-CoA ligase [Bacillus thuringiensis MC28]
Length = 386
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDSKEVEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|406893065|gb|EKD38229.1| succinyl-CoA synthetase subunit beta [uncultured bacterium]
Length = 385
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 209/341 (61%), Gaps = 33/341 (9%)
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
E ++G L+TKQT G V V+V K V I +E Y IV DR +I S GG DI
Sbjct: 73 EAILGMTLVTKQTGPEGRLVKTVLVEKGVAIKKEMYLSIVPDRSTATVTIIASQDGGMDI 132
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VAAKTPH + + ++ GI + Q ++ L L +
Sbjct: 133 EEVAAKTPHRIIKVQVNPLIGIQSYHLR--------------------QVMFGLELDKVL 172
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
K EF LK L+NLF+ D + +EINPL+ T+E +I++DAK++ D
Sbjct: 173 MK-----EFSAILK--------NLYNLFVDYDCSLVEINPLIVTEENTIIALDAKMDVDS 219
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FR ++ + ++ +E DP E +A+KYNLNY+ +DGN+G +VNGAGLAMATMDIIK G
Sbjct: 220 NALFRHPDVVAMHDPNEDDPAEAEAAKYNLNYINLDGNVGNMVNGAGLAMATMDIIKQAG 279
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
+PANFLDVGGG N E + FRII SDS VK IL+N+FGGI+ C +A+G+V A K +
Sbjct: 280 AQPANFLDVGGGANAEMVENGFRIILSDSKVKGILINIFGGILRCDVLAQGVVQAAKKVQ 339
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
LS+P+VVR+EGTNV EG+RIL ES L LI A+DL +AA V
Sbjct: 340 LSVPVVVRMEGTNVDEGRRILAESGLKLINATDLADAAKKV 380
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K +LS+P+VVR+EGTNV EG+RIL ES L LI A+DL +AA
Sbjct: 328 AQGVVQAAKKVQLSVPVVVRMEGTNVDEGRRILAESGLKLINATDLADAA 377
>gi|423615903|ref|ZP_17591737.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD115]
gi|401260440|gb|EJR66613.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD115]
Length = 386
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDSKEVEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|218234588|ref|YP_002368637.1| succinyl-CoA synthetase subunit beta [Bacillus cereus B4264]
gi|228902339|ref|ZP_04066496.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis IBL 4222]
gi|228909661|ref|ZP_04073484.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis IBL 200]
gi|228922590|ref|ZP_04085890.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228954112|ref|ZP_04116141.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228960052|ref|ZP_04121716.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228966781|ref|ZP_04127825.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar sotto str. T04001]
gi|229071334|ref|ZP_04204557.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
F65185]
gi|229081091|ref|ZP_04213601.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock4-2]
gi|229111307|ref|ZP_04240860.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock1-15]
gi|229129112|ref|ZP_04258085.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BDRD-Cer4]
gi|229146407|ref|ZP_04274778.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BDRD-ST24]
gi|229152035|ref|ZP_04280230.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
m1550]
gi|229180112|ref|ZP_04307456.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
172560W]
gi|229192005|ref|ZP_04318975.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
ATCC 10876]
gi|296504331|ref|YP_003666031.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
BMB171]
gi|365159387|ref|ZP_09355568.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus sp.
7_6_55CFAA_CT2]
gi|402558838|ref|YP_006601562.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
HD-771]
gi|423359128|ref|ZP_17336631.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD022]
gi|423425972|ref|ZP_17403003.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG3X2-2]
gi|423437291|ref|ZP_17414272.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG4X12-1]
gi|423503487|ref|ZP_17480079.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HD73]
gi|423561758|ref|ZP_17538034.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
MSX-A1]
gi|423582046|ref|ZP_17558157.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD014]
gi|423585755|ref|ZP_17561842.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD045]
gi|423628929|ref|ZP_17604678.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD154]
gi|423635393|ref|ZP_17611046.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD156]
gi|423641083|ref|ZP_17616701.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD166]
gi|423649699|ref|ZP_17625269.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD169]
gi|423656695|ref|ZP_17631994.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD200]
gi|434376939|ref|YP_006611583.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
HD-789]
gi|449090777|ref|YP_007423218.1| SucC [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|226734923|sp|B7HDV9.1|SUCC_BACC4 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|218162545|gb|ACK62537.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
B4264]
gi|228591556|gb|EEK49405.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
ATCC 10876]
gi|228603321|gb|EEK60798.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
172560W]
gi|228631384|gb|EEK88018.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
m1550]
gi|228637040|gb|EEK93499.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BDRD-ST24]
gi|228654349|gb|EEL10214.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BDRD-Cer4]
gi|228672083|gb|EEL27374.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock1-15]
gi|228702135|gb|EEL54611.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock4-2]
gi|228711788|gb|EEL63740.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
F65185]
gi|228792880|gb|EEM40438.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228799568|gb|EEM46521.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228805678|gb|EEM52268.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228837019|gb|EEM82360.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228849950|gb|EEM94781.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis IBL 200]
gi|228857308|gb|EEN01811.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis IBL 4222]
gi|296325383|gb|ADH08311.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
BMB171]
gi|363625385|gb|EHL76426.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus sp.
7_6_55CFAA_CT2]
gi|401085000|gb|EJP93246.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD022]
gi|401110719|gb|EJQ18618.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG3X2-2]
gi|401120446|gb|EJQ28242.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG4X12-1]
gi|401202015|gb|EJR08880.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
MSX-A1]
gi|401212925|gb|EJR19666.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD014]
gi|401233101|gb|EJR39597.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD045]
gi|401268474|gb|EJR74522.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD154]
gi|401278144|gb|EJR84080.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD156]
gi|401280144|gb|EJR86066.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD166]
gi|401282979|gb|EJR88876.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD169]
gi|401290436|gb|EJR96130.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD200]
gi|401787490|gb|AFQ13529.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
HD-771]
gi|401875496|gb|AFQ27663.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
HD-789]
gi|402458841|gb|EJV90581.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HD73]
gi|449024534|gb|AGE79697.1| SucC [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 386
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 226/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T E +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|206602146|gb|EDZ38628.1| Succinyl-CoA synthetase, beta subunit [Leptospirillum sp. Group II
'5-way CG']
Length = 396
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 223/387 (57%), Gaps = 41/387 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+ +KAQI AGGRG GV ++IP ++ +++G L+T QT G V K
Sbjct: 50 WAVKAQIHAGGRGKA-------GGVKLARKSEEIPDLVSQILGKTLVTHQTGPEGKKVLK 102
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V + + NI RE Y +V DR +I S GG +IE VA K P + + +D +G
Sbjct: 103 VWIEEGSNIAREFYLGVVVDRTTRRMTLIASTEGGMEIEEVAEKHPEKIFHLALDPLEGY 162
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
+ + + ++ FL L S+ Q + V+
Sbjct: 163 SPYIGRRVSQFL------------------GLPFSTQTQMV---------------NIVR 189
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L + F DA+ +EINPLV T E +I++DAK+ FDDNA RQ + ++SE +P E
Sbjct: 190 DLLDFFQRRDASMVEINPLVLTREDRLIALDAKVGFDDNAVGRQPVVRGLRDLSEENPLE 249
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASKYNLNYV +DGNI C+VNGAGLAMATMD+I L GG PANFLDVGGG ++E++ QAF
Sbjct: 250 IEASKYNLNYVKLDGNIACMVNGAGLAMATMDVIALAGGSPANFLDVGGGASKETVEQAF 309
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
RII D +VK I VN+FGGIV C IA G++ A + K++IPLVVRL+GTN +EG+ +L
Sbjct: 310 RIILGDPHVKGIFVNIFGGIVRCERIAGGIIAAAQDVKITIPLVVRLQGTNAKEGREMLR 369
Query: 408 ESKLPLIFASDLDEAAS-LVNACKSFK 433
S L + A +L E A +V A K K
Sbjct: 370 SSGLAIQVAEELYEGAEKIVLAVKGDK 396
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + K++IPLVVRL+GTN +EG+ +L S L + A +L E A +LA
Sbjct: 336 AGGIIAAAQDVKITIPLVVRLQGTNAKEGREMLRSSGLAIQVAEELYEGAEKIVLA 391
>gi|423612053|ref|ZP_17587914.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD107]
gi|401247060|gb|EJR53404.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD107]
Length = 386
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 228/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L++ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|423547120|ref|ZP_17523478.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuB5-5]
gi|401178841|gb|EJQ86014.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
HuB5-5]
Length = 386
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKGVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +EV+ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDSKEVEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|229162772|ref|ZP_04290729.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
R309803]
gi|228620654|gb|EEK77523.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
R309803]
Length = 386
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLEEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|429851686|gb|ELA26864.1| succinyl- ligase beta-chain [Colletotrichum gloeosporioides Nara
gc5]
Length = 409
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 222/401 (55%), Gaps = 57/401 (14%)
Query: 46 KEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
++ VIKAQ+LAGGRG G FDNG K GV + +
Sbjct: 62 EDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSAHEAEI---------------------- 99
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
V + + RE Y I+ DR PV++ S GG DIE VA + P + T ID+++
Sbjct: 100 -SVYICERKFARREFYLAILMDRATQAPVIVSSSQGGMDIETVAKENPEAIITTNIDINK 158
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
G+T+ +A+DIA L F Q I D A
Sbjct: 159 GVTDEIARDIAVKLGFS----------------------EQCIED-----------AKDT 185
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
+QKL+ +F+ DATQ+EINPL ET + +V+ +DAK FDDNA++RQK IF+ + ++ D
Sbjct: 186 IQKLYKIFVEKDATQIEINPLSETSDHKVLCMDAKFGFDDNADYRQKEIFTWRDTTQEDA 245
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
EV A++ LN++ +DG+IGCLVNGAGLAMATMDIIKL+ G PANFLDVGGG +I +
Sbjct: 246 DEVRAAQSGLNFIKLDGDIGCLVNGAGLAMATMDIIKLNKGAPANFLDVGGGATPAAIKE 305
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF +I+SD V I VN+FGGIV C IA GL+N K L IP++ RL+GTN++ I
Sbjct: 306 AFELITSDPKVTAIFVNIFGGIVRCDLIAHGLINTVKELNLKIPIIARLQGTNMEAAHEI 365
Query: 406 LDESKLPLIFASDLDEAA-SLVNACKSFKLSIPLVVRLEGT 445
++ S + + DL AA V K K++ + V +E T
Sbjct: 366 INNSGMKIFSIDDLQTAAEKAVQLSKVVKMARDIDVGVEFT 406
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L+N K L IP++ RL+GTN++ I++ S + + DL AA
Sbjct: 334 AHGLINTVKELNLKIPIIARLQGTNMEAAHEIINNSGMKIFSIDDLQTAA 383
>gi|182416040|ref|YP_001821106.1| succinyl-CoA synthetase subunit beta [Opitutus terrae PB90-1]
gi|226734967|sp|B1ZP17.1|SUCC_OPITP RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|177843254|gb|ACB77506.1| succinyl-CoA synthetase, beta subunit [Opitutus terrae PB90-1]
Length = 393
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/376 (41%), Positives = 220/376 (58%), Gaps = 35/376 (9%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+K+QI AGGRG G F +GFK GV + + KM+G+ L+T QT G V +
Sbjct: 44 VVKSQIHAGGRGKGTFTDGFKGGVKVCKSKAEAREAAGKMLGNTLVTAQTGPAGRKVQTI 103
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
I +E Y I+ DR + PV++ S GG +IE VA TP + + +D G+
Sbjct: 104 YFNVGSQIKKEYYLAILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGL- 162
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKL-WNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
ADF +V++L + L ++ K A L ++
Sbjct: 163 -------ADF-------------QVRELVFKLGFTAAEGKNASKL-------------IR 189
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ F DA+ +E+NPL+ T + +V ++DAK+ FDDNA FR + +++E DP+E
Sbjct: 190 ALYRCFWENDASMVEVNPLITTPDGQVEALDAKVAFDDNALFRHPELVELRDLNEEDPKE 249
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASK+ LNY+ +DGNI CLVNGAGLAM+TMDIIK GG PANFLDVGGG + E ++ AF
Sbjct: 250 IEASKHELNYIALDGNIACLVNGAGLAMSTMDIIKHFGGTPANFLDVGGGASREQVVAAF 309
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II D NV+ ILVN+FGGI++C IA+G+V+A K L +PLVVRLEG NV GK L
Sbjct: 310 KIILGDKNVRGILVNIFGGIMDCNVIAQGIVDAVKEVGLELPLVVRLEGNNVAAGKATLA 369
Query: 408 ESKLPLIFASDLDEAA 423
S L L+ + +AA
Sbjct: 370 TSGLKLVSGDSMADAA 385
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V+A K L +PLVVRLEG NV GK L S L L+ + +AA +
Sbjct: 336 AQGIVDAVKEVGLELPLVVRLEGNNVAAGKATLATSGLKLVSGDSMADAAQKIV 389
>gi|384915519|ref|ZP_10015735.1| succinyl-CoA synthetase beta chain [Methylacidiphilum fumariolicum
SolV]
gi|384527069|emb|CCG91606.1| succinyl-CoA synthetase beta chain [Methylacidiphilum fumariolicum
SolV]
Length = 394
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 230/393 (58%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E A +I L + V+KAQI AGGRG G F NG + GV + +++ I ++MIG
Sbjct: 26 ETPEAAFDIACKLAKRPLVVKAQIAAGGRGKGRFLNGLEGGVKICQSPEEVKQIAQRMIG 85
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT + G V KV+V++S++I+ E Y I +++ S +GG +IE +A
Sbjct: 86 SILVTAQTGEQGQLVKKVLVSESIDISSEIYLSISYSHSTASLLLMGSRAGGVEIEKIAV 145
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+ P Q I + + D+ LW+ A++
Sbjct: 146 ENP-----------QAIVKKFV--LPDY----------------SLWDF----QAREFGL 172
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
L FRG + + ++ L+ F+ DA+ EINPL ER+ ++DAKI DDNA FR
Sbjct: 173 DLGFRGKELVELSRILKSLYKTFVKHDASLCEINPLAMDRERKFWALDAKITIDDNALFR 232
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK + + + DP+E +A + +NYVG+DG IGC+VNGAGLAMATMDI+ GG PAN
Sbjct: 233 QKELLAYRYETIYDPQESEAIRSGVNYVGLDGQIGCMVNGAGLAMATMDILDRFGGRPAN 292
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++ + AFRI+ S+ N++ IL+N+FGGI+ C IA+ +V A K+ + SIPL
Sbjct: 293 FLDVGGGADQSQVENAFRILLSNRNLRVILINIFGGIMRCDLIAEAIVEATKTHRPSIPL 352
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
V+RLEGT V+EGK IL+ S L +FA DL++AA
Sbjct: 353 VIRLEGTRVKEGKIILENSSLEYLFADDLEDAA 385
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++V A K+ + SIPLV+RLEGT V+EGK IL+ S L +FA DL++AA
Sbjct: 336 AEAIVEATKTHRPSIPLVIRLEGTRVKEGKIILENSSLEYLFADDLEDAAR 386
>gi|423483426|ref|ZP_17460116.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG6X1-2]
gi|401140977|gb|EJQ48532.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG6X1-2]
Length = 386
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 228/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N++++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLEEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L++ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYSAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRNKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLEEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|222151080|ref|YP_002560234.1| succinyl-CoA synthetase subunit beta [Macrococcus caseolyticus
JCSC5402]
gi|254778443|sp|B9EBC7.1|SUCC_MACCJ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|222120203|dbj|BAH17538.1| succinyl-CoA synthetase beta subunit [Macrococcus caseolyticus
JCSC5402]
Length = 389
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L YV+KAQI AGGRG GV ++ ++ ++++G L+T
Sbjct: 31 AVEVAKGLKEGVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVESYAKELLGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V +++V + +I +E Y V DR + V++ S GGT+IE VA TP
Sbjct: 84 HQTGPEGKEVKRLLVEEGCDIKKEYYLGFVLDRATDSVVLMGSEEGGTEIEEVAEATPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ A+ +A F ++ ++ V K + L
Sbjct: 144 IFKEVIDPVVGLMPYQARRLA----FNINIPKES---VNKAVKIMLG------------- 183
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+++F+ DA+ +EINPLV T + EV+++DAKINFD NA FRQK++
Sbjct: 184 -------------LYDVFMKKDASIIEINPLVTTGDGEVLALDAKINFDANALFRQKDVM 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMD I GG PANFLDVG
Sbjct: 231 ELRDLDEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFGGNPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG +E + +AF+II D V+ I VN+FGGI+ C IA+G+V A K +L+IPLVVRLE
Sbjct: 291 GGATKEKVTEAFKIILGDEKVEGIFVNIFGGIMKCDVIAEGVVAAAKELELTIPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV +GK IL S L + AS + E A
Sbjct: 351 GTNVDQGKEILGNSGLAITPASTMAEGA 378
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L+IPLVVRLEGTNV +GK IL S L + AS + E A +
Sbjct: 329 AEGVVAAAKELELTIPLVVRLEGTNVDQGKEILGNSGLAITPASTMAEGAQKIV 382
>gi|254361864|ref|ZP_04977998.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213]
gi|452744496|ref|ZP_21944340.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
serotype 6 str. H23]
gi|153093403|gb|EDN74394.1| succinate--CoA ligase (ADP-forming) [Mannheimia haemolytica PHL213]
gi|452087449|gb|EME03828.1| succinyl-CoA synthetase subunit beta [Mannheimia haemolytica
serotype 6 str. H23]
Length = 386
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/401 (39%), Positives = 227/401 (56%), Gaps = 40/401 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPI 84
+ + + A A +K L +++ IK Q+ AGGRG GV N ++
Sbjct: 20 SQGIACKTAEEAVEAIKQLQGEQWAIKCQVHAGGRGKA-------GGVKLVRNEAEVREF 72
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+K +G +L+T QT G VN + + ++ NI RE Y V DR + + S +GG +
Sbjct: 73 ADKWLGKRLVTFQTDANGQPVNTLYLEETCNIDRELYLGAVVDRSAQKVIFMASSAGGMN 132
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VA KTP L+ ID G +++A L +GD EV++ ++F+
Sbjct: 133 IEEVAEKTPELIHKAVIDPLTGGQGYQGRELAFKLGLKGD-------EVKQFADIFV--- 182
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
KL NLF+ D LE+NPLV T E +++ +DAK++ D
Sbjct: 183 -----------------------KLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSID 219
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
NA +R + + S+ D RE +A K+NLNYV +DGNIGC+VNGAGLAM TMDI+KL+
Sbjct: 220 SNALYRHPELKELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIVKLY 279
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
GG+PANFLDVGGG +E + AF++I SD NVK +LVN+FGGIV C IA G++ A
Sbjct: 280 GGKPANFLDVGGGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIAAVNEV 339
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
+++P++VRLEGTN +G+ IL S L ++ AS L +AA L
Sbjct: 340 GVNVPVIVRLEGTNAAQGREILANSGLSILAASSLKQAAEL 380
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A +++P++VRLEGTN +G+ IL S L ++ AS L +AA
Sbjct: 329 ADGVIAAVNEVGVNVPVIVRLEGTNAAQGREILANSGLSILAASSLKQAA 378
>gi|319892262|ref|YP_004149137.1| succinyl-CoA ligase subunit beta [Staphylococcus pseudintermedius
HKU10-03]
gi|317161958|gb|ADV05501.1| Succinyl-CoA ligase [ADP-forming] beta chain [Staphylococcus
pseudintermedius HKU10-03]
Length = 388
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 230/392 (58%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ YV+KAQI AGGRG GV ++ ++ +++G
Sbjct: 28 AEEAVEKAKELDTDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVEAYANELLGKV 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + NI +E Y V DR + ++ S GGT+IE VAAK
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGANIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKN 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA F ++ ++ + K FL +L
Sbjct: 141 PEKIFKETIDPVIGLAPYQARRIA----FNINIPKESINKAVK----FLIAL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T E +V+++D+KINFDDNA FR K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVLTGEGDVLALDSKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMD I G PANFL
Sbjct: 228 DIVELRDLEEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFNGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDENVKGIFVNIFGGIMRCDIIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+EGK+IL +S L + A+ + E A
Sbjct: 348 RLEGTNVKEGKQILKDSGLAIEPANTMAEGAQ 379
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+EGK+IL +S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVKEGKQILKDSGLAIEPANTMAEGAQKIV 382
>gi|421589543|ref|ZP_16034672.1| succinyl-CoA synthetase subunit beta [Rhizobium sp. Pop5]
gi|403705483|gb|EJZ21063.1| succinyl-CoA synthetase subunit beta [Rhizobium sp. Pop5]
Length = 397
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 225/387 (58%), Gaps = 39/387 (10%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILE 86
+E+A A K L YV+K+QI AGGRG G F K GV ++ ++ +
Sbjct: 28 VEEAEAAA---KSLPGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSIDEVVAHAK 84
Query: 87 KMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIE 146
+M+GH L+T QT + G VN++ + +I RE Y ++ DR ++S GG DIE
Sbjct: 85 EMLGHTLVTAQTGEAGKQVNRLYIEDGADIARELYCSLLVDRSVGKVAFVVSTEGGMDIE 144
Query: 147 NVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQ 206
VA TP + TI ID G+T + I+ L+ G AA E K +LF +
Sbjct: 145 AVAHDTPEKIHTIAIDPEAGVTAADVAAISKALQLDG-----AAAEDAK--SLFPA---- 193
Query: 207 KIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDN 266
L+ F D LE+NPL+ + + +DAK++FD N
Sbjct: 194 ----------------------LYKAFNEKDMALLEVNPLIVMKDGHLRVLDAKMSFDGN 231
Query: 267 AEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
A FR ++ + + +E D +E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G
Sbjct: 232 ALFRHDDVRALRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGK 291
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKL 386
EPANF DVGGG +E + AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L
Sbjct: 292 EPANFCDVGGGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGL 351
Query: 387 SIPLVVRLEGTNVQEGKRILDESKLPL 413
+PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 352 KVPLVVRLEGTNVELGKKILNESGLAI 378
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAI 378
>gi|403745631|ref|ZP_10954426.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121349|gb|EJY55663.1| succinyl-CoA synthetase, beta subunit [Alicyclobacillus hesperidum
URH17-3-68]
Length = 384
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/380 (41%), Positives = 223/380 (58%), Gaps = 40/380 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV + +++++ +++G L+T QT G V ++
Sbjct: 43 VVKAQIHAGGRGKA-------GGVKVSKSLEEVEANARELLGKTLVTHQTGPEGKVVKRL 95
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
++ + +I +E Y +V DR V++ S GG +IE VAA+ P + ID G+
Sbjct: 96 LIEQLTDIRKEYYIGLVLDRAQGRIVMMASQEGGVEIEEVAAQHPEKIFRETIDPATGLN 155
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
A ++A LE T V+K +
Sbjct: 156 PFQANNLAYKLEL-------PPTAVRKAVQFMMG-------------------------- 182
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+N F++ D + EINPLV T E +++++DAK+NFDDNA +R +I + + E DP+E+
Sbjct: 183 LYNAFVAKDCSVAEINPLVLTGEGDILALDAKLNFDDNALYRHPDIVALRDEDEEDPKEI 242
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASKY L+Y+ +DGNIGC+VNGAGLAMATMD IK +GG PANFLDVGGG +EE + AF+
Sbjct: 243 EASKYGLSYIALDGNIGCMVNGAGLAMATMDTIKYYGGAPANFLDVGGGASEEKVTAAFK 302
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD V+ ILVN+FGGI+ C IA G+V A K L PLVVRLEGTNV++GK IL+E
Sbjct: 303 IILSDPKVQGILVNIFGGIMKCDVIANGVVAAAKQVGLDKPLVVRLEGTNVEQGKAILNE 362
Query: 409 SKLPLIFASDLDEAASLVNA 428
S L ++ A L +AA + A
Sbjct: 363 SGLSIVAADSLADAAQKIVA 382
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L PLVVRLEGTNV++GK IL+ES L ++ A L +AA +
Sbjct: 328 ANGVVAAAKQVGLDKPLVVRLEGTNVEQGKAILNESGLSIVAADSLADAAQKIV 381
>gi|381210006|ref|ZP_09917077.1| succinyl-CoA synthetase subunit beta [Lentibacillus sp. Grbi]
Length = 386
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/396 (42%), Positives = 239/396 (60%), Gaps = 41/396 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + + L+ +V+KAQI AGGRG GV N+ D+ +++G L+T
Sbjct: 31 AVKVAQKLDSDVFVVKAQIHAGGRGKA-------GGVKIAKNLDDVRTYANELLGKNLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I E Y +V DR + V++ S GGT+IE VAA+TP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIQNEYYVGLVLDRATSRVVMMASEEGGTEIEEVAAETPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G++ A+ +A +N+ +
Sbjct: 144 IFKEVIDPVVGLSGYQARRLA--------------------FNINIPD------------ 171
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L KAA + L+N+F+ D + EINPLV T + +V+++D+K+NFDDNA FRQK++
Sbjct: 172 -ELIGKAAKFMIGLYNVFVEKDCSIAEINPLVTTGDGQVMALDSKLNFDDNAMFRQKDVM 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+L+YV +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFLDVG
Sbjct: 231 ELRDLEEEDEKEIEASKYDLSYVALDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SDS+VK I VN+FGGI+ C IA+G+V A K L +PLVVRLE
Sbjct: 291 GGATTEKVTEAFKIILSDSHVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLEMPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDL-DEAASLVNACK 430
GTNV GK+ILDES L + A + D A +V+A K
Sbjct: 351 GTNVDLGKKILDESGLNITSAESMADGAEKIVSAVK 386
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+ILDES L + A + + A + A
Sbjct: 329 AEGVVEATKQVGLEMPLVVRLEGTNVDLGKKILDESGLNITSAESMADGAEKIVSA 384
>gi|158520091|ref|YP_001527961.1| succinyl-CoA synthetase subunit beta [Desulfococcus oleovorans
Hxd3]
gi|226734944|sp|A8ZRW7.1|SUCC_DESOH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|158508917|gb|ABW65884.1| succinyl-CoA synthetase, beta subunit [Desulfococcus oleovorans
Hxd3]
Length = 388
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 207/338 (61%), Gaps = 39/338 (11%)
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G +L+T QT G V KV+V + V+I +E Y +V DR G V++ S +GG DIE
Sbjct: 76 MLGSRLVTPQTGPEGTLVQKVLVEQGVSIAKELYLSVVADRETAGIVIMASEAGGMDIEA 135
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA TP + + ++ G++ + Q + L L A+
Sbjct: 136 VAETTPEKILKVFVNPLAGLSAFHCR--------------------QAAYGLNLP--AEA 173
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
I F + V L+ LF+ DA+ +EINPL+ T ++ V+++DAKINFDD+A
Sbjct: 174 IKPFTQV-----------VSGLFKLFVDYDASLVEINPLILTTDKAVMALDAKINFDDSA 222
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
FR K+I + + E DP EV+AS++NLNY+ MDGN+G +VNGAGLAMATMDIIKL G E
Sbjct: 223 LFRHKDILALRDTDEEDPLEVEASRFNLNYINMDGNVGNMVNGAGLAMATMDIIKLAGAE 282
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG N E + FRII SD VKCILVN+FGGI+ C +A G+V A ++ +
Sbjct: 283 PANFLDVGGGANAEMVENGFRIILSDPKVKCILVNIFGGILRCDVLASGIVQAARNTAIH 342
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
+PLVVR+EGTNV EGKRIL ES L DL AASL
Sbjct: 343 VPLVVRMEGTNVDEGKRILAESGL------DLHSAASL 374
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A+ +V A ++ + +PLVVR+EGTNV EGKRIL ES L L A+ L +
Sbjct: 329 ASGIVQAARNTAIHVPLVVRMEGTNVDEGKRILAESGLDLHSAASLKD 376
>gi|301065049|ref|ZP_07205394.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
gi|300440898|gb|EFK05318.1| succinate-CoA ligase, beta subunit [delta proteobacterium NaphS2]
Length = 393
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 211/343 (61%), Gaps = 31/343 (9%)
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
+ ++G L+T QT G+ VN+V++ + V+I RE Y +V DR P +I SP+GG I
Sbjct: 74 KSLLGSSLVTPQTGPEGVKVNQVLIEEGVDIDREFYLGMVVDRAAAMPAMIFSPAGGMSI 133
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VAA+TP L+ T +D G A+++A L+ + +++L N+
Sbjct: 134 EEVAAQTPELIWTECVDPATGWMPYQARNLAYRLD-----PLPSTETLRELINVM----- 183
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
L+ +F+S+D + +EINPL+ T +V+++DAK+N DD
Sbjct: 184 ---------------------ANLYKVFMSLDCSLVEINPLIITKAGKVLALDAKLNIDD 222
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FRQK I + S +DP E+ A+ YNLNY+ +DGNIG +VNGAGLAMATMD+IK G
Sbjct: 223 NALFRQKEIVKLEDTSGTDPLELTAAAYNLNYIRLDGNIGAMVNGAGLAMATMDLIKGAG 282
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
EPANFLDVGGG EE I + F II D V+ ILVN+FGGI+ C +A+G+V A + +
Sbjct: 283 AEPANFLDVGGGATEEMITKGFEIILGDDRVRAILVNIFGGILRCDVLARGVVAAAQKSR 342
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
+ +PL+VRLEGTNV EG++IL+ S L + A DL EAA LV A
Sbjct: 343 IQVPLIVRLEGTNVDEGRKILEGSGLKFLVAKDLSEAAGLVAA 385
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A + ++ +PL+VRLEGTNV EG++IL+ S L + A DL EAA
Sbjct: 331 ARGVVAAAQKSRIQVPLIVRLEGTNVDEGRKILEGSGLKFLVAKDLSEAAG 381
>gi|86359471|ref|YP_471363.1| succinyl-CoA synthetase subunit beta [Rhizobium etli CFN 42]
gi|123510555|sp|Q2K3F0.1|SUCC_RHIEC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|86283573|gb|ABC92636.1| succinyl-CoA synthetase beta subunit protein [Rhizobium etli CFN
42]
Length = 397
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 220/369 (59%), Gaps = 36/369 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +++D+ ++M+G+ L+T QT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSPEAKGGVRLAKSIEDVVANAKEMLGNTLVTAQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA TP ++TI ID
Sbjct: 103 VNRLYIEDGADIDRELYCSLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T + I+ L+ +G AA + + L+ L
Sbjct: 163 TGVTAADVAKISAALKLEG----AAAEDAKSLFPL------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + +DAK++FD NA FR ++ + + +E D
Sbjct: 194 ----LYRAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVRALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANF DVGGG +E +
Sbjct: 250 AKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPL 413
IL+ES L +
Sbjct: 370 ILNESGLAI 378
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAI 378
>gi|423412359|ref|ZP_17389479.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG3O-2]
gi|423431856|ref|ZP_17408860.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG4O-1]
gi|401104427|gb|EJQ12404.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG3O-2]
gi|401116612|gb|EJQ24450.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG4O-1]
Length = 386
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 225/388 (57%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T E +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGEGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDFDEEDSKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|228928884|ref|ZP_04091916.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228830691|gb|EEM76296.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 386
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 227/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTEVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|297623491|ref|YP_003704925.1| succinyl-CoA synthetase subunit beta [Truepera radiovictrix DSM
17093]
gi|297164671|gb|ADI14382.1| succinyl-CoA synthetase, beta subunit [Truepera radiovictrix DSM
17093]
Length = 407
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 224/387 (57%), Gaps = 47/387 (12%)
Query: 49 VIKAQILAGGRGLGHFD------------NGFKSGVHFTNNVQDIPPILEKMIGHKLITK 96
V+K+QI AGGRG G F +G K GV T + + + + M+G L+T
Sbjct: 48 VLKSQIHAGGRGKGRFKEHPEVAGVNVITDGLKGGVRATE--ERVRELAKAMLGSTLVTV 105
Query: 97 QTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLV 156
QT ++G VN++ + + ++I RE Y +V DR V++ S GG +IE VA ++P +
Sbjct: 106 QTGESGKQVNRLYIEQGIDIGRELYLSVVLDRAVGRNVMMASTEGGVEIEEVAERSPEKI 165
Query: 157 KTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRG 216
ID G+ A +A L GD K F+ +L
Sbjct: 166 LREHIDPLVGLANFQAARLAHGLGLTGD--------ALKNGVRFMRAL------------ 205
Query: 217 DLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFS 276
AKAA E +D +EINPLV T + +V+++D K++FD+NA FR K +
Sbjct: 206 ---AKAAEE----------LDTDMIEINPLVVTKQGQVMALDGKMSFDNNALFRHKMVAE 252
Query: 277 QNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGG 336
+ SE DP E++AS Y L+++ +DG IGCLVNGAGLAMATMDIIK GGEPANFLDVGG
Sbjct: 253 MRDTSEEDPAELEASNYGLSFIKLDGTIGCLVNGAGLAMATMDIIKHVGGEPANFLDVGG 312
Query: 337 GVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEG 396
G E++ AF+II+ D NV+ I VN+FGGI+ C TIA G+V A + L +PLVVRLEG
Sbjct: 313 GATTENVTAAFKIITKDPNVRGIFVNIFGGIMKCDTIANGVVEAVRQVGLEVPLVVRLEG 372
Query: 397 TNVQEGKRILDESKLPLIFASDLDEAA 423
TNV GKRI+DES L ++ A D+ + A
Sbjct: 373 TNVDLGKRIIDESGLNVVSAKDMKDGA 399
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L +PLVVRLEGTNV GKRI+DES L ++ A D+ + A +
Sbjct: 350 ANGVVEAVRQVGLEVPLVVRLEGTNVDLGKRIIDESGLNVVSAKDMKDGAQKIV 403
>gi|163792306|ref|ZP_02186283.1| succinyl-CoA synthetase, beta subunit [alpha proteobacterium
BAL199]
gi|159182011|gb|EDP66520.1| succinyl-CoA synthetase, beta subunit [alpha proteobacterium
BAL199]
Length = 389
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 214/346 (61%), Gaps = 34/346 (9%)
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
E+M+G L+T QT G V ++ + +I RE Y ++ DR + VI S GG DI
Sbjct: 74 ERMLGMTLVTHQTGPQGKEVKRLYIEDGCDIARELYLSLLVDRATSRVTVIASTEGGMDI 133
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VAA TP + ++ ID G++ A+ IA L +G
Sbjct: 134 EEVAAHTPDKILSVAIDPVVGMSAHYARRIAFSLGLEG---------------------- 171
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
++++ ++F + L+ F+ +DA+ +EINPLV T ++I++DAK+NFDD
Sbjct: 172 KQVSAAVKF-----------MISLYKSFVDLDASMMEINPLVVTGAGDIIALDAKMNFDD 220
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FR +I + E DP E++A K+ LNYV +DGNIGC+VNGAGLAMATMDIIKL G
Sbjct: 221 NALFRHPDIAELRDEDEEDPAELEAGKHELNYVKLDGNIGCMVNGAGLAMATMDIIKLVG 280
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
GEPANFLDVGGG ++ + AF+II SD NV+ ILVN+FGGI+ C IA+G+V A +
Sbjct: 281 GEPANFLDVGGGATKDRVTAAFKIILSDKNVEGILVNIFGGIMRCDVIAEGVVAAAREVS 340
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACK 430
L +PLVVRLEGTNV+ GK+IL +S LP++ A +L +AA +V A K
Sbjct: 341 LHVPLVVRLEGTNVELGKQILADSGLPIVSADNLGDAAEKIVKAVK 386
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A + L +PLVVRLEGTNV+ GK+IL +S LP++ A +L +AA + A
Sbjct: 329 AEGVVAAAREVSLHVPLVVRLEGTNVELGKQILADSGLPIVSADNLGDAAEKIVKA 384
>gi|313200691|ref|YP_004039349.1| succinyl-CoA synthetase subunit beta [Methylovorus sp. MP688]
gi|312440007|gb|ADQ84113.1| succinyl-CoA synthetase, beta subunit [Methylovorus sp. MP688]
Length = 392
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/393 (40%), Positives = 230/393 (58%), Gaps = 40/393 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ ++A K + +V+KAQI AGGRG GV + QD+ + ++G
Sbjct: 26 ENPQSAVEAAKSIGGDAWVVKAQIHAGGRG-------KAGGVKVVKSYQDVEAVAASLLG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T Q G V +V+V +++ I RE Y ++ DR V++ S +GG DIE +AA
Sbjct: 79 KPLVTYQNAPDGQPVLQVLVEQTLPIARELYLSLLVDRSLERVVMVASAAGGMDIEEIAA 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P E + Q++ D L D +A+ + L L+ ++IA
Sbjct: 139 TQP---------------EKILQEVCDPLNGLVDFQARNLA-----FGLGLAG--EQIAA 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
F+ + L+ LF D LEINPLV T E ++++D K++ DDNA +R
Sbjct: 177 FVRL-----------AKGLYKLFKENDLALLEINPLVVTAEGALVALDCKMSVDDNALYR 225
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK + Q + S+ D +E +A LNY+ ++GNIGC+VNGAGLAMATMD+IKLHGG PAN
Sbjct: 226 QKALAEQRDWSQDDAKEAEAHNAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGAPAN 285
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++ +AF+II +DSNVK ILVN+FGGI+ C IA+G++ A K + IP+
Sbjct: 286 FLDVGGGATAATVARAFKIILADSNVKAILVNIFGGIMRCDIIAEGIITAVKEVGIQIPV 345
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRLEGTNV+ G+++L ES L +I A+ L +AA
Sbjct: 346 VVRLEGTNVELGRKMLSESGLSIISAAGLTDAA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K + IP+VVRLEGTNV+ G+++L ES L +I A+ L +AA + A
Sbjct: 329 AEGIITAVKEVGIQIPVVVRLEGTNVELGRKMLSESGLSIISAAGLTDAAQQAVRA 384
>gi|386827409|ref|ZP_10114516.1| succinyl-CoA synthetase, beta subunit [Beggiatoa alba B18LD]
gi|386428293|gb|EIJ42121.1| succinyl-CoA synthetase, beta subunit [Beggiatoa alba B18LD]
Length = 388
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 223/388 (57%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
AT + L +++KAQ+ AGGRG GV N+++++ I + +IG +L+T
Sbjct: 31 ATQRAQALGGSSWMVKAQVHAGGRGKA-------GGVKKANSLEEVAEITKSLIGKRLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V V+V I E Y ++ DR VI S +GG DIE VAA TP
Sbjct: 84 HQTGADGQPVTCVLVESPSAINSELYLSLLVDRASKRIAVIASAAGGMDIEEVAAHTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ + ID GI +IA L AT+ ++L + S
Sbjct: 144 IARLLIDPTVGIQAYQCNEIAFALGLD-------ATQRKQLLYILPS------------- 183
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+ LF D + LEINPL+ TD+ +++++D KIN DDNA +R ++
Sbjct: 184 -------------LYRLFKDKDLSLLEINPLITTDKGDLLALDGKINLDDNALYRHTDLA 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + S+ D +E A +++LNYV +DG+I C+VNGAGLAMATMD+IKLHGG PANFLDVG
Sbjct: 231 ALYDASQEDEKEHRARQFDLNYVALDGDIACMVNGAGLAMATMDVIKLHGGNPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG N + +AF+II SDS VK ILVN+FGGIV C IA+G+++A K +P++VRLE
Sbjct: 291 GGTNTAKVTEAFKIILSDSKVKAILVNIFGGIVRCDMIAEGVIHAMKETGTKLPVIVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK +L ES L + A DL +AA
Sbjct: 351 GTNVEAGKSLLRESGLSVTAADDLTDAA 378
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +++A K +P++VRLEGTNV+ GK +L ES L + A DL +AA
Sbjct: 329 AEGVIHAMKETGTKLPVIVRLEGTNVEAGKSLLRESGLSVTAADDLTDAA 378
>gi|226313082|ref|YP_002772976.1| succinyl-CoA synthetase subunit beta [Brevibacillus brevis NBRC
100599]
gi|398814432|ref|ZP_10573113.1| succinyl-CoA synthetase, beta subunit [Brevibacillus sp. BC25]
gi|254778432|sp|C0ZFB3.1|SUCC_BREBN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|226096030|dbj|BAH44472.1| succinyl-CoA synthetase beta chain [Brevibacillus brevis NBRC
100599]
gi|398036701|gb|EJL29910.1| succinyl-CoA synthetase, beta subunit [Brevibacillus sp. BC25]
Length = 386
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/388 (40%), Positives = 225/388 (57%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N+ ++ +++G L+T
Sbjct: 31 AVEAAKELGTQVNVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYASEILGKVLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR V++ S GG DIE VAA P
Sbjct: 84 HQTGPEGKEVKRLLIEQGCDIKKEYYVGVVVDRATGSVVMMASEEGGMDIEEVAANNPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +D G+ FQ A+++A +
Sbjct: 144 IFKEVVDPVTGLNG-----------FQ----------------------ARRLAYAINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L KAA + L+ F+ DA+ EINPLV T + EV+++DAK+NFD NA +R +I
Sbjct: 171 KELINKAAKFMMSLYQAFVDKDASIAEINPLVVTGDGEVMALDAKLNFDSNALYRHPDIV 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ E D +E++ASK++L+Y+ +DGNIGC+VNGAGLAMATMDI+K +GG+PANFLDVG
Sbjct: 231 ALRDLDEEDEKEIEASKFDLSYIALDGNIGCMVNGAGLAMATMDIVKFYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG EE + +AF+II D VK I VN+FGGI+ C IA G+VNA K KL PLVVRLE
Sbjct: 291 GGATEEKVTEAFKIILRDEKVKGIFVNIFGGIMKCDVIANGVVNAAKQIKLDKPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVDLGKKILNESGLNIVAAESMADGA 378
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +VNA K KL PLVVRLEGTNV GK+IL+ES L ++ A + + A +
Sbjct: 329 ANGVVNAAKQIKLDKPLVVRLEGTNVDLGKKILNESGLNIVAAESMADGAEKIV 382
>gi|342904901|ref|ZP_08726697.1| Succinyl-CoA ligase ADP-forming subunit beta [Haemophilus
haemolyticus M21621]
gi|341952357|gb|EGT78887.1| Succinyl-CoA ligase ADP-forming subunit beta [Haemophilus
haemolyticus M21621]
Length = 389
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/431 (37%), Positives = 246/431 (57%), Gaps = 49/431 (11%)
Query: 2 EMAFNQQIANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGL 61
E Q ++ VK + S D+V L +L L+ ++ K Q+ AGGRG
Sbjct: 5 EYQAKQLFEHYGLPVKNGAVCQSVDEVDL--------VLAQLSGDKWAAKCQVHAGGRGK 56
Query: 62 GHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETY 121
GV +V++ EK +G +L+T QT K+G VN++ ++ +I +E Y
Sbjct: 57 A-------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKSGQPVNQIYFEETCDIDKEFY 109
Query: 122 FCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEF 181
V DR V I S +GG +IE +A +PHL+ + ID G +++A L
Sbjct: 110 LSAVVDRASQKVVFIASSAGGMNIEEIAQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGL 169
Query: 182 QGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQL 241
G T+ ++ ++F+ L LFL D + +
Sbjct: 170 SG-------TQNKQFTDIFMG--------------------------LSRLFLEKDLSLV 196
Query: 242 EINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMD 301
E+NPLV T + ++ +DAKI+ DDNA FR K++F+ +++++D RE +A K+ LNYV ++
Sbjct: 197 EVNPLVLTKQGNLVCLDAKISVDDNALFRHKDLFALQDLTQNDAREAEAEKFQLNYVALE 256
Query: 302 GNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILV 361
G+IGC+VNGAGLAM TMDI+KL+GG+PANFLDVGGG +E + +AF+II +D +VK ILV
Sbjct: 257 GDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVGGGATKERVAEAFKIILTDPSVKVILV 316
Query: 362 NVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
N+FGGIV C IA+G+++A + +P++VRLEGTN + G++IL ES + ++ A L +
Sbjct: 317 NIFGGIVRCDLIAEGVIDAVNEVGVRVPVIVRLEGTNAEIGRQILAESDVNILTAHSLQQ 376
Query: 422 AASL-VNACKS 431
AA L VNA K
Sbjct: 377 AAELAVNAAKG 387
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +++A + +P++VRLEGTN + G++IL ES + ++ A L +AA
Sbjct: 329 AEGVIDAVNEVGVRVPVIVRLEGTNAEIGRQILAESDVNILTAHSLQQAA 378
>gi|357619222|gb|EHJ71882.1| hypothetical protein KGM_20644 [Danaus plexippus]
Length = 283
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/259 (54%), Positives = 178/259 (68%), Gaps = 33/259 (12%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
L D+ + +L D EYV+KAQILAGGRG GHF+NGFK GVH T N +I + MI
Sbjct: 51 LLDSSLDSKVLSDFKANEYVVKAQILAGGRGKGHFNNGFKGGVHLTKNPNEIVNLARNMI 110
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
GHKLITKQTPK GI V+KVM+A+SVNI RETY IV +R +NG ++ SP+GG DIE VA
Sbjct: 111 GHKLITKQTPKDGILVDKVMIAESVNIKRETYLSIVLERAYNGAALVASPAGGMDIEAVA 170
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
KTPHL+KT+PID+++GIT+ A+++A+FLEF+G L K A E++KLW
Sbjct: 171 EKTPHLIKTVPIDIYEGITDKTAREVAEFLEFKGPLLNKCADEIKKLW------------ 218
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
LFL VDATQLEINPLVETD+ +V++VDAKINFD NAEF
Sbjct: 219 ---------------------QLFLKVDATQLEINPLVETDDGKVVAVDAKINFDGNAEF 257
Query: 270 RQKNIFSQNEVSESDPREV 288
RQK IF+ ++ SE+DPREV
Sbjct: 258 RQKEIFALDDKSETDPREV 276
>gi|30263839|ref|NP_846216.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. Ames]
gi|47529264|ref|YP_020613.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186686|ref|YP_029938.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
Sterne]
gi|65321163|ref|ZP_00394122.1| COG0045: Succinyl-CoA synthetase, beta subunit [Bacillus anthracis
str. A2012]
gi|165873311|ref|ZP_02217916.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0488]
gi|167642033|ref|ZP_02400263.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0193]
gi|170689662|ref|ZP_02880842.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0465]
gi|170709362|ref|ZP_02899776.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0389]
gi|177655998|ref|ZP_02937125.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0174]
gi|227813256|ref|YP_002813265.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. CDC
684]
gi|229604390|ref|YP_002868073.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
A0248]
gi|254683457|ref|ZP_05147317.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
CNEVA-9066]
gi|254721978|ref|ZP_05183767.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
A1055]
gi|254735874|ref|ZP_05193580.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
Western North America USA6153]
gi|254739601|ref|ZP_05197295.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
Kruger B]
gi|254751205|ref|ZP_05203244.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
Vollum]
gi|386737658|ref|YP_006210839.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
H9401]
gi|421507375|ref|ZP_15954295.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. UR-1]
gi|421639591|ref|ZP_16080182.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. BF1]
gi|81583679|sp|Q81WK0.1|SUCC_BACAN RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|254778428|sp|C3P5N7.1|SUCC_BACAA RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|254778429|sp|C3L791.1|SUCC_BACAC RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|30258483|gb|AAP27702.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. Ames]
gi|47504412|gb|AAT33088.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. 'Ames Ancestor']
gi|49180613|gb|AAT55989.1| succinyl-CoA synthase, beta subunit [Bacillus anthracis str.
Sterne]
gi|164710949|gb|EDR16521.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0488]
gi|167510013|gb|EDR85429.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0193]
gi|170125736|gb|EDS94649.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0389]
gi|170666386|gb|EDT17169.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0465]
gi|172079897|gb|EDT65005.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0174]
gi|227004887|gb|ACP14630.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. CDC 684]
gi|229268798|gb|ACQ50435.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus
anthracis str. A0248]
gi|384387510|gb|AFH85171.1| Succinyl-CoA synthetase beta chain [Bacillus anthracis str. H9401]
gi|401822509|gb|EJT21659.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. UR-1]
gi|403393256|gb|EJY90501.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str. BF1]
Length = 386
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 226/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMTDGA 378
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMTDGAQKIV 382
>gi|424916473|ref|ZP_18339837.1| succinyl-CoA synthetase, beta subunit [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392852649|gb|EJB05170.1| succinyl-CoA synthetase, beta subunit [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 397
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 218/369 (59%), Gaps = 36/369 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV ++ ++ ++M+GH L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSIDEVVAHAKEMLGHTLVTAQTGDAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP ++TI ID
Sbjct: 103 VNRLYIEDGADIARELYCSILVDRSVGRVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T + I+ L+ G AA E K +LF +
Sbjct: 163 AGVTAADVAAISKALQLDG-----AAAEDAK--SLFPA---------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D LE+NPL+ + + +DAK++FD NA FR ++ + + +E D
Sbjct: 194 ----LYKAFNEKDMALLEVNPLIVMKDGHLRVLDAKMSFDGNALFRHDDVKTLRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANF DVGGG +E +
Sbjct: 250 AKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPL 413
IL+ES L +
Sbjct: 370 ILNESGLAI 378
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAI 378
>gi|53803924|ref|YP_114179.1| succinyl-CoA synthetase subunit beta [Methylococcus capsulatus str.
Bath]
gi|53757685|gb|AAU91976.1| succinyl-CoA synthase, beta subunit [Methylococcus capsulatus str.
Bath]
Length = 389
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 228/395 (57%), Gaps = 45/395 (11%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEK 87
V DA+ A+ + +++ +V+KAQI AGGRG GV ++++++ +
Sbjct: 24 VAYSDAQAAS-VAEEIGGSRWVVKAQIHAGGRGKA-------GGVKVAHSIEEVRQYADA 75
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G V ++ V ++ +I +E Y V DR + +I S GG +IE
Sbjct: 76 MLGSHLVTHQTGPGGSLVQRLWVEQASHIKKEYYLGFVIDRGNQRITLIASSEGGMEIEE 135
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + +D G+ L+FQ +K
Sbjct: 136 VAKETPEKIVKEVVDPAIGL-----------LDFQ----------------------CRK 162
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLV---ETDEREVISVDAKINFD 264
+A + +G L +A ++ ++ DA Q EINPL E+DE ++ +DAK NFD
Sbjct: 163 VATAIGLKGKLMPQAVRLMKAIYRCMRDKDALQAEINPLAIVGESDE-SLMVLDAKFNFD 221
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
DNA +RQ+ I +++E DP+EV+AS + LNY+ +DGNIGC+VNGAGLAMA++D I LH
Sbjct: 222 DNALYRQRTITEMRDLAEEDPKEVEASGHGLNYIALDGNIGCIVNGAGLAMASLDAITLH 281
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
GG PANFLDVGGG + E + A RI+ D NV+CILVN+F GI C IAKGL+ AC S
Sbjct: 282 GGRPANFLDVGGGASPEKVTNACRIVLEDPNVRCILVNIFAGINRCDWIAKGLIQACDSL 341
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 419
++ +PL+VRL GTNV EG++IL ES L I A +L
Sbjct: 342 QIKVPLIVRLAGTNVDEGRKILAESGLSFITAENL 376
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 515
A L+ AC S ++ +PL+VRL GTNV EG++IL ES L I A +L
Sbjct: 331 AKGLIQACDSLQIKVPLIVRLAGTNVDEGRKILAESGLSFITAENL 376
>gi|423395863|ref|ZP_17373064.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG2X1-1]
gi|423406739|ref|ZP_17383888.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG2X1-3]
gi|401653605|gb|EJS71149.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG2X1-1]
gi|401660029|gb|EJS77512.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BAG2X1-3]
Length = 386
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 226/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLEEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|42782928|ref|NP_980175.1| succinyl-CoA synthetase subunit beta [Bacillus cereus ATCC 10987]
gi|47570337|ref|ZP_00240982.1| succinyl-CoA synthetase beta chain [Bacillus cereus G9241]
gi|49478405|ref|YP_037897.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|52141652|ref|YP_085177.1| succinyl-CoA synthetase subunit beta [Bacillus cereus E33L]
gi|118479058|ref|YP_896209.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis str.
Al Hakam]
gi|217961256|ref|YP_002339824.1| succinyl-CoA synthetase subunit beta [Bacillus cereus AH187]
gi|222097281|ref|YP_002531338.1| succinyl-CoA synthetase subunit beta [Bacillus cereus Q1]
gi|225865817|ref|YP_002751195.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
03BB102]
gi|228916473|ref|ZP_04080039.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228935150|ref|ZP_04097977.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228947555|ref|ZP_04109845.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228986979|ref|ZP_04147105.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229092878|ref|ZP_04224012.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock3-42]
gi|229123350|ref|ZP_04252554.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
95/8201]
gi|229140478|ref|ZP_04269033.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BDRD-ST26]
gi|229186076|ref|ZP_04313245.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BGSC 6E1]
gi|229197946|ref|ZP_04324661.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
m1293]
gi|301055326|ref|YP_003793537.1| succinyl-CoA synthetase subunit beta [Bacillus cereus biovar
anthracis str. CI]
gi|375285759|ref|YP_005106198.1| succinyl-CoA synthetase subunit beta [Bacillus cereus NC7401]
gi|376267732|ref|YP_005120444.1| Succinyl-CoA ligase (ADP-forming) beta chain [Bacillus cereus
F837/76]
gi|384181649|ref|YP_005567411.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
serovar finitimus YBT-020]
gi|402556043|ref|YP_006597314.1| succinyl-CoA synthetase subunit beta [Bacillus cereus FRI-35]
gi|423353538|ref|ZP_17331165.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
IS075]
gi|423374367|ref|ZP_17351705.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AND1407]
gi|423550415|ref|ZP_17526742.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
ISP3191]
gi|423567269|ref|ZP_17543516.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
MSX-A12]
gi|423574558|ref|ZP_17550677.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
MSX-D12]
gi|423604537|ref|ZP_17580430.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD102]
gi|81395103|sp|Q6HEX9.1|SUCC_BACHK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|81409456|sp|Q732N4.1|SUCC_BACC1 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|81686574|sp|Q636J0.1|SUCC_BACCZ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|189046882|sp|A0RHK9.1|SUCC_BACAH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|226734924|sp|B7HLG9.1|SUCC_BACC7 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|254778430|sp|C1EP60.1|SUCC_BACC3 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|254778431|sp|B9IVC5.1|SUCC_BACCQ RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|42738855|gb|AAS42783.1| succinyl-CoA synthase, beta subunit [Bacillus cereus ATCC 10987]
gi|47553002|gb|EAL11408.1| succinyl-CoA synthetase beta chain [Bacillus cereus G9241]
gi|49329961|gb|AAT60607.1| succinyl-CoA synthase, beta subunit [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975121|gb|AAU16671.1| succinyl-CoA synthase, beta subunit [Bacillus cereus E33L]
gi|118418283|gb|ABK86702.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Bacillus
thuringiensis str. Al Hakam]
gi|217067520|gb|ACJ81770.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
AH187]
gi|221241339|gb|ACM14049.1| succinyl-CoA synthase, beta subunit [Bacillus cereus Q1]
gi|225785683|gb|ACO25900.1| succinate-CoA ligase (ADP-forming), beta subunit [Bacillus cereus
03BB102]
gi|228585525|gb|EEK43628.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
m1293]
gi|228597252|gb|EEK54903.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BGSC 6E1]
gi|228643039|gb|EEK99315.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
BDRD-ST26]
gi|228660126|gb|EEL15762.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
95/8201]
gi|228690500|gb|EEL44283.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
Rock3-42]
gi|228772757|gb|EEM21197.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228812075|gb|EEM58406.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228824515|gb|EEM70320.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228843052|gb|EEM88134.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|300377495|gb|ADK06399.1| succinyl-CoA synthetase subunit beta [Bacillus cereus biovar
anthracis str. CI]
gi|324327733|gb|ADY22993.1| succinyl-CoA synthetase subunit beta [Bacillus thuringiensis
serovar finitimus YBT-020]
gi|358354286|dbj|BAL19458.1| succinyl-CoA synthase, beta subunit [Bacillus cereus NC7401]
gi|364513532|gb|AEW56931.1| Succinyl-CoA ligase (ADP-forming) beta chain [Bacillus cereus
F837/76]
gi|401089351|gb|EJP97522.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
IS075]
gi|401094279|gb|EJQ02361.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
AND1407]
gi|401190031|gb|EJQ97081.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
ISP3191]
gi|401212083|gb|EJR18829.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
MSX-D12]
gi|401214357|gb|EJR21087.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
MSX-A12]
gi|401245157|gb|EJR51515.1| succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
VD102]
gi|401797253|gb|AFQ11112.1| succinyl-CoA synthetase subunit beta [Bacillus cereus FRI-35]
Length = 386
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 226/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|229157412|ref|ZP_04285490.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
ATCC 4342]
gi|228626139|gb|EEK82888.1| Succinyl-CoA ligase [ADP-forming] subunit beta [Bacillus cereus
ATCC 4342]
Length = 386
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 226/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDRNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMADGA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIV 382
>gi|262277898|ref|ZP_06055691.1| succinyl-CoA synthase, beta subunit [alpha proteobacterium HIMB114]
gi|262225001|gb|EEY75460.1| succinyl-CoA synthase, beta subunit [alpha proteobacterium HIMB114]
Length = 386
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 230/393 (58%), Gaps = 45/393 (11%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K + + V+KAQI AGGRG GV NN+ ++ +++ G L+T QT
Sbjct: 36 KKITTNKIVLKAQIHAGGRGKA-------GGVKLVNNLNELKKEAKELFGKVLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ + + I +E Y + DR + I S GG DIE VAAKTP + T
Sbjct: 89 QGREVKRLYLEDASEIDQELYLSCLVDRATSKIAFISSAEGGMDIEEVAAKTPEKIITTR 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL--AQKIADFLEFRGDL 218
+ + + + +D+ D L K +NL ++L +KI
Sbjct: 149 VGIEDKVND---KDVLDIL---------------KPFNLDGNALEDGKKI---------- 180
Query: 219 KAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQN 278
VQ L+ + DA +E+NPL+ T + +VI +DAKINFDDNA FR I
Sbjct: 181 -------VQALYQSLIKTDANLIEVNPLILTKDNKVICLDAKINFDDNALFRHPEILELR 233
Query: 279 EVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGV 338
+ +E DP E++ASKY+L Y+ +DG IGC+VNGAGLAMATMDII L+G EPANFLDVGGG
Sbjct: 234 DQNEEDPMEIEASKYDLAYIKLDGQIGCMVNGAGLAMATMDIINLYGSEPANFLDVGGGA 293
Query: 339 NEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTN 398
++E + AF+II SD NVK IL+N+FGGI+ C IA+G++ A K +L+IPLVVRL GTN
Sbjct: 294 SKEKVTAAFKIILSDKNVKGILINIFGGIMRCDVIAEGVIAAAKETELNIPLVVRLAGTN 353
Query: 399 VQEGKRILDESKLPLIFASDLDEAA-SLVNACK 430
++GK IL+ S L +I A DL++AA +V A K
Sbjct: 354 FEKGKEILNNSGLKIIPADDLNDAAKKIVEAIK 386
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K +L+IPLVVRL GTN ++GK IL+ S L +I A DL++AA + A
Sbjct: 329 AEGVIAAAKETELNIPLVVRLAGTNFEKGKEILNNSGLKIIPADDLNDAAKKIVEA 384
>gi|49483408|ref|YP_040632.1| succinyl-CoA synthetase subunit beta [Staphylococcus aureus subsp.
aureus MRSA252]
gi|295427732|ref|ZP_06820364.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|418582079|ref|ZP_13146157.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1605]
gi|418891878|ref|ZP_13445993.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1176]
gi|418900652|ref|ZP_13454709.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1214]
gi|418908956|ref|ZP_13462959.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG149]
gi|418917040|ref|ZP_13470999.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1267]
gi|418922827|ref|ZP_13476744.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1233]
gi|418982158|ref|ZP_13529866.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1242]
gi|418985826|ref|ZP_13533512.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1500]
gi|77417488|sp|Q6GHJ0.1|SUCC_STAAR RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|49241537|emb|CAG40223.1| putative CoA synthetase protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|295128090|gb|EFG57724.1| succinyl-CoA ligase subunit beta [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|377703120|gb|EHT27436.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1214]
gi|377704439|gb|EHT28748.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1242]
gi|377705644|gb|EHT29948.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1500]
gi|377710489|gb|EHT34727.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1605]
gi|377731210|gb|EHT55267.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1176]
gi|377736150|gb|EHT60180.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1233]
gi|377750214|gb|EHT74152.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG1267]
gi|377753994|gb|EHT77904.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIG149]
Length = 388
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 228/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN YV+KAQI AGGRG GV T ++ ++ ++++G
Sbjct: 28 AEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKITKSLSEVETYAKELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++ + + I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ FQ A++IA +
Sbjct: 141 PEKIFKETIDPVIGLS-----------PFQ----------------------ARRIAFNI 167
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KAA + L+N+F+ D + +EINPLV T + +V+++DAKINFDDNA FR K
Sbjct: 168 NIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++ ++ E DP+E++ASK++L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GG E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K L++PLVV
Sbjct: 288 DAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV+ GK+IL +S L + A+ + E A
Sbjct: 348 RLEGTNVELGKKILKDSGLAIEPAATMAEGA 378
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL +S L + A+ + E A +
Sbjct: 329 AEGIVEAVKEVDLTLPLVVRLEGTNVELGKKILKDSGLAIEPAATMAEGAQKIV 382
>gi|358060973|ref|ZP_09147661.1| succinyl-CoA synthetase subunit beta [Staphylococcus simiae CCM
7213]
gi|357256548|gb|EHJ06908.1| succinyl-CoA synthetase subunit beta [Staphylococcus simiae CCM
7213]
Length = 388
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 227/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN YV+KAQI AGGRG GV ++ ++ +++G
Sbjct: 28 AEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAK+
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKS 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA F ++ ++ V K LS
Sbjct: 141 PEKIFKESIDPVVGLSPYQARRIA----FNINIPKES---VNKAAKFLLS---------- 183
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
L+N+F+ D + +EINPLV T + EV+++DAKINFDDNA FR K
Sbjct: 184 ----------------LYNVFIEKDCSIVEINPLVTTGDGEVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++ ++ E DP+E++ASK++L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DVVDMRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GG E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K L++PLVV
Sbjct: 288 DAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV+ GK+IL +S L + A+ + E A
Sbjct: 348 RLEGTNVELGKQILKDSGLAIEPAATMAEGA 378
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL +S L + A+ + E A +
Sbjct: 329 AEGIVEAVKEVDLTLPLVVRLEGTNVELGKQILKDSGLAIEPAATMAEGAQKIV 382
>gi|254759312|ref|ZP_05211337.1| succinyl-CoA synthetase subunit beta [Bacillus anthracis str.
Australia 94]
Length = 386
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 226/388 (58%), Gaps = 40/388 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L V+KAQI AGGRG GV N+ ++ E ++G L+T
Sbjct: 31 AVEAAKELGTDVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYAESILGTTLVT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA KTP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ ID G+ FQ A++IA +
Sbjct: 144 IFKEYIDPAVGLQG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+LNY+ +DGNIGC+VNGAGLAMATMDIIK + G+PANFLDVG
Sbjct: 231 ELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA+G++ A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+ GK+IL+ES L ++ A + + A
Sbjct: 351 GTNVELGKKILNESGLNIVAAESMTDGA 378
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L ++ A + + A +
Sbjct: 329 AEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMTDGAQKIV 382
>gi|424897354|ref|ZP_18320928.1| succinyl-CoA synthetase, beta subunit [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393181581|gb|EJC81620.1| succinyl-CoA synthetase, beta subunit [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 397
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 225/387 (58%), Gaps = 39/387 (10%)
Query: 30 LEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILE 86
+E+A A K L YV+K+QI AGGRG G F K GV ++ ++ +
Sbjct: 28 VEEAEAAA---KSLPGPLYVVKSQIHAGGRGKGKFKELSPESKGGVRLAKSIDEVVAHAK 84
Query: 87 KMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIE 146
+M+GH L+T QT G VN++ + +I RE Y ++ DR ++S GG DIE
Sbjct: 85 EMLGHTLVTAQTGDAGKQVNRLYIEDGADIARELYCSLLVDRSVGRVAFVVSTEGGMDIE 144
Query: 147 NVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQ 206
VA TP + TI ID G+T + I+ L+ +G AA E K +LF +
Sbjct: 145 AVAHDTPEKIHTIAIDPEAGVTAADVAAISKALQLEG-----AAAEDAK--SLFPA---- 193
Query: 207 KIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDN 266
L+ F D LE+NPL+ + + +DAK++FD N
Sbjct: 194 ----------------------LYKAFNDKDMALLEVNPLIVMKDGHLRVLDAKMSFDGN 231
Query: 267 AEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGG 326
A FR ++ + + +E D +E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G
Sbjct: 232 ALFRHDDVKTLRDETEEDAKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGK 291
Query: 327 EPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKL 386
EPANF DVGGG +E + AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L
Sbjct: 292 EPANFCDVGGGAGKEKVAAAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGL 351
Query: 387 SIPLVVRLEGTNVQEGKRILDESKLPL 413
+PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 352 KVPLVVRLEGTNVELGKKILNESGLAI 378
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAI 378
>gi|365922730|ref|ZP_09446913.1| succinate-CoA ligase, beta subunit [Cardiobacterium valvarum F0432]
gi|364572167|gb|EHM49726.1| succinate-CoA ligase, beta subunit [Cardiobacterium valvarum F0432]
Length = 386
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 218/372 (58%), Gaps = 40/372 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+V+KAQ+ AGGRG GV ++ ++ +M+G L TKQT G+ ++K
Sbjct: 43 WVVKAQVHAGGRGKA-------GGVKVAKSLDEVRQYANQMLGSTLKTKQTGDVGLPIHK 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V++ + ++I +E Y +V DR +I S GG DIE VA K+P + +I ID G
Sbjct: 96 VLIEEGLDIVKELYLSVVVDRASKRVSIIASAEGGMDIEEVAEKSPEKIHSIGIDPAAGY 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
+ + + F L +K L AT +Q
Sbjct: 156 FPYIGRRLG-----------------------FAMGLDKKQVGQL----------ATLLQ 182
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ LF+ D + +EINPL+ T + +++++DAKI DDNA +R K++ + ++ D RE
Sbjct: 183 GLYTLFIEKDLSMVEINPLIITGDGKLLALDAKIGTDDNALYRHKDLAEMRDPTQEDERE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
A + LNYV +DGNIGC+VNGAGLAMATMDIIKLHGGEPANFLDVGGG E + +AF
Sbjct: 243 NKAQELELNYVALDGNIGCMVNGAGLAMATMDIIKLHGGEPANFLDVGGGATAERVKEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
++I + VK ILVN+FGGIV C IA+G++NA K L +P+V RL+GTNV+ G+++LD
Sbjct: 303 KLILTAPQVKSILVNIFGGIVRCDLIAEGIINAAKEIDLKVPVVARLQGTNVELGRKMLD 362
Query: 408 ESKLPLIFASDL 419
ES L + A DL
Sbjct: 363 ESGLAITSAEDL 374
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL 515
A ++NA K L +P+V RL+GTNV+ G+++LDES L + A DL
Sbjct: 329 AEGIINAAKEIDLKVPVVARLQGTNVELGRKMLDESGLAITSAEDL 374
>gi|158319672|ref|YP_001512179.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus oremlandii
OhILAs]
gi|189046877|sp|A8MM16.1|SUCC_ALKOO RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|158139871|gb|ABW18183.1| succinyl-CoA synthetase, beta subunit [Alkaliphilus oremlandii
OhILAs]
Length = 386
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 160/390 (41%), Positives = 226/390 (57%), Gaps = 44/390 (11%)
Query: 34 RTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKL 93
R A +I D+ V+KAQI AGGRG GV ++ ++ +++G L
Sbjct: 33 RAAWHIESDI----AVVKAQIHAGGRGKA-------GGVKIAKSITEVEQFSRELLGKTL 81
Query: 94 ITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTP 153
+T QT + G V +++ + I +E Y DR ++ +I S GG DIE VAA P
Sbjct: 82 VTHQTGQEGRVVKAILIEEGCEIYKEYYIAFTLDRENSKIALIASEEGGMDIEEVAANRP 141
Query: 154 HLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLE 213
+ ID G+T+ FQG +++ L
Sbjct: 142 DKILKEIIDPLIGLTD-----------FQG----------------------RRVCFNLN 168
Query: 214 FRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKN 273
G L ++ L+ F+ D + LEINPLV T V+++DAKINFD N +R ++
Sbjct: 169 IDGSLINDTVELMKNLYRCFIEKDCSLLEINPLVITKNNRVMALDAKINFDGNGLYRNED 228
Query: 274 IFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLD 333
+ +++E D +E++ASKYNL+Y+ +DGNIGC+VNGAGLAMATMDIIKL+GG PANFLD
Sbjct: 229 VLKLRDLNEEDEKEIEASKYNLSYISLDGNIGCMVNGAGLAMATMDIIKLYGGNPANFLD 288
Query: 334 VGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVR 393
VGGG +EE ++ AF+II SD VK I VN+FGGI+ C IAKG+VNA KL++PLVVR
Sbjct: 289 VGGGASEEKVMNAFKIILSDPKVKGIFVNIFGGIMKCDVIAKGIVNAANEVKLNVPLVVR 348
Query: 394 LEGTNVQEGKRILDESKLPLIFASDLDEAA 423
LEGTNV+ GK IL++S L ++ A+ + + A
Sbjct: 349 LEGTNVELGKEILNQSNLNIVTATTMADGA 378
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +VNA KL++PLVVRLEGTNV+ GK IL++S L ++ A+ + + A +
Sbjct: 329 AKGIVNAANEVKLNVPLVVRLEGTNVELGKEILNQSNLNIVTATTMADGAKKIV 382
>gi|225850685|ref|YP_002730919.1| succinyl-CoA synthetase subunit beta [Persephonella marina EX-H1]
gi|254778447|sp|C0QQH3.1|SUCC_PERMH RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|225645431|gb|ACO03617.1| succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein
63) (VEG63) [Persephonella marina EX-H1]
Length = 388
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 158/375 (42%), Positives = 218/375 (58%), Gaps = 40/375 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
V+KAQI AGGRG GV NN+ ++ +++G L+T QT G+ V+++
Sbjct: 44 VVKAQIHAGGRGKA-------GGVKLANNLDEVQKYAAELLGKTLVTFQTGPEGLPVSRI 96
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+ + NI +E Y I DR + +++ S GG +IE VAAK P + T ID G+
Sbjct: 97 YIEEGTNIDKEFYVAITLDRSKSKLIIMASSEGGMEIEEVAAKNPEAIITEVIDPFLGLR 156
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
A++IA L +L KAA LF+ K
Sbjct: 157 PYQAREIALKLGLPKNLLNKAA-------GLFV--------------------------K 183
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+ L++ DA+ +EINPLV T E ++ +DAK++FDDNA FR +I + ++ EV
Sbjct: 184 LYELYMKEDASMVEINPLVLTKEGNIVILDAKVDFDDNALFRHPDIMEMEDPTQESELEV 243
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
A +YNLNY+ +DGNI C+VNGAGLAMATMD IKL GGEPANFLDVGG N E I AF+
Sbjct: 244 KAKQYNLNYIKLDGNIACMVNGAGLAMATMDTIKLAGGEPANFLDVGGSANAEQIANAFK 303
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NVK I +N+FGGI+ C +A+G++ A K +P++VR+EGTNV+ GK++L E
Sbjct: 304 IILSDPNVKAIFINIFGGILRCDRLAEGIIQASKEVNPHVPIIVRMEGTNVELGKKMLAE 363
Query: 409 SKLPLIFASDLDEAA 423
S L LI A + E A
Sbjct: 364 SGLDLIPADTMWEGA 378
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K +P++VR+EGTNV+ GK++L ES L LI A + E A
Sbjct: 329 AEGIIQASKEVNPHVPIIVRMEGTNVELGKKMLAESGLDLIPADTMWEGA 378
>gi|190893738|ref|YP_001980280.1| succinyl-CoA synthetase subunit beta [Rhizobium etli CIAT 652]
gi|226734977|sp|B3PQ90.1|SUCC_RHIE6 RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|190699017|gb|ACE93102.1| succinyl-CoA synthetase protein, beta subunit [Rhizobium etli CIAT
652]
Length = 397
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 219/369 (59%), Gaps = 36/369 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V+D+ +++M+G+ L+T QT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSPEAKGGVRLAKSVEDVVANVKEMLGNTLVTAQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA TP ++TI ID
Sbjct: 103 VNRLYIEDGADIERELYCSLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T + I+ L+ G A + + L+ L
Sbjct: 163 TGVTAADVAKISSALKLDG----AAGEDAKSLFPL------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ + +DAK++FD NA FR ++ + + +E D
Sbjct: 194 ----LYKAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVRALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANF DVGGG +E +
Sbjct: 250 AKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPL 413
IL+ES L +
Sbjct: 370 ILNESGLAI 378
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAI 378
>gi|311746758|ref|ZP_07720543.1| succinyl-CoA synthase, beta subunit [Algoriphagus sp. PR1]
gi|126578437|gb|EAZ82601.1| succinyl-CoA synthase, beta subunit [Algoriphagus sp. PR1]
Length = 404
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 163/388 (42%), Positives = 225/388 (57%), Gaps = 39/388 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YVIKAQI AGGRG G +GV ++D+ + ++G L+T QT G VNK
Sbjct: 47 YVIKAQIHAGGRGKGKIQQTGSNGVVLAKKLEDVADKAKAILGGTLVTHQTGPEGKVVNK 106
Query: 108 VMVAKSVNI-----TRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
++VA+ V +E Y I+ DR V++ S GG DIE+VA +P + ID
Sbjct: 107 ILVAEDVYYPGDSEPKEYYLSILLDRAQGCNVIMASTEGGMDIEDVAENSPEKIIKEWID 166
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
G+ + +A + L L+ A K + ++F
Sbjct: 167 PKVGLQGFQIRKVA--------------------FKLGLTGTAFK--EMVKF-------- 196
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
+ L+ + D++Q EINP+++T + ++++VDAK+N DDNA +R K++ ++SE
Sbjct: 197 ---IAALYKAYEGTDSSQFEINPVLKTSDDKILAVDAKVNLDDNALYRHKDLADLRDLSE 253
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP EV+A K LNYV +DGN+GC+VNGAGLAMATMD+IKL GGEPANFLDVGGG N +
Sbjct: 254 EDPLEVEAGKSGLNYVKLDGNVGCMVNGAGLAMATMDMIKLSGGEPANFLDVGGGANATT 313
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF-KLSIPLVVRLEGTNVQE 401
+ FRII D NVK IL+NVFGGIV C IA G+V A KS + +P++VRL+GTN E
Sbjct: 314 VEAGFRIILQDPNVKAILINVFGGIVRCDRIANGVVEAYKSIGDIRVPIIVRLQGTNAVE 373
Query: 402 GKRILDESKLPLIFASDLDEAASLVNAC 429
G +I+DES L + A L EAA V A
Sbjct: 374 GAKIIDESGLKVASAITLKEAADKVQAV 401
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A KS + +P++VRL+GTN EG +I+DES L + A L EAA+
Sbjct: 345 ANGVVEAYKSIGDIRVPIIVRLQGTNAVEGAKIIDESGLKVASAITLKEAAD 396
>gi|417109598|ref|ZP_11963279.1| succinyl-CoA synthetase protein, beta subunit [Rhizobium etli
CNPAF512]
gi|327188904|gb|EGE56096.1| succinyl-CoA synthetase protein, beta subunit [Rhizobium etli
CNPAF512]
Length = 397
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 219/369 (59%), Gaps = 36/369 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +++D+ ++ M+G+ L+T QT + G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSPEAKGGVRLAKSIEDVVANVKDMLGNTLVTAQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA TP ++TI ID
Sbjct: 103 VNRLYIEDGADIDRELYCSLLVDRSVGKVAFVVSTEGGMDIEAVAHDTPEKIQTIAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T A D+A KI+ L+ G A +
Sbjct: 163 TGVT---AADVA------------------------------KISSALKLDGAAAEDAKS 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ L+ F D + LEINPL+ + +DAK++FD NA FR ++ + + +E D
Sbjct: 190 LLPLLYKAFNEKDMSLLEINPLIVMKNGHLRVLDAKMSFDGNALFRHDDVRALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANF DVGGG +E +
Sbjct: 250 AKEIEASKWDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGKEPANFCDVGGGAGKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPKVEGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPL 413
IL+ES L +
Sbjct: 370 ILNESGLAI 378
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A ++ A K L +PLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKILNESGLAI 378
>gi|253998617|ref|YP_003050680.1| succinyl-CoA synthetase subunit beta [Methylovorus glucosetrophus
SIP3-4]
gi|253985296|gb|ACT50153.1| succinyl-CoA synthetase, beta subunit [Methylovorus glucosetrophus
SIP3-4]
Length = 392
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 231/393 (58%), Gaps = 40/393 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ ++A K + +V+KAQI AGGRG GV + +D+ + ++G
Sbjct: 26 ENPQSAVEAAKSIGGDAWVVKAQIHAGGRG-------KAGGVKVVKSYEDVEAVAASLLG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T Q G V +V+V +++ I RE Y ++ DR V++ S +GG DIE++AA
Sbjct: 79 KPLVTYQNAPDGQPVLQVLVEQTLPIARELYLSLLVDRSLERVVMVASAAGGMDIEDIAA 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P E + Q++ D L D +A+ + L L+ ++IA
Sbjct: 139 TQP---------------EKILQEVCDPLNGLVDFQAR-----NLAFGLGLAG--EQIAA 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
F+ + L+ LF D LEINPLV T E ++++D K++ DDNA +R
Sbjct: 177 FVRL-----------AKGLYKLFKENDLALLEINPLVVTAEGALVALDCKMSVDDNALYR 225
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK + Q + S+ D +E +A LNY+ ++GNIGC+VNGAGLAMATMD+IKLHGG PAN
Sbjct: 226 QKALAEQRDWSQDDAKEAEAHNAGLNYIALNGNIGCMVNGAGLAMATMDLIKLHGGAPAN 285
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++ +AF+II +DSNVK ILVN+FGGI+ C IA+G++ A K + IP+
Sbjct: 286 FLDVGGGATAATVARAFKIILADSNVKAILVNIFGGIMRCDIIAEGIITAVKEVGIQIPV 345
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRLEGTNV+ G+++L ES L +I A+ L +AA
Sbjct: 346 VVRLEGTNVELGRKMLSESGLSIISAAGLTDAA 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K + IP+VVRLEGTNV+ G+++L ES L +I A+ L +AA + A
Sbjct: 329 AEGIITAVKEVGIQIPVVVRLEGTNVELGRKMLSESGLSIISAAGLTDAAQQAVRA 384
>gi|197117851|ref|YP_002138278.1| succinyl-CoA synthetase subunit beta [Geobacter bemidjiensis Bem]
gi|197087211|gb|ACH38482.1| succinyl-CoA synthetase, beta subunit [Geobacter bemidjiensis Bem]
Length = 392
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 171/406 (42%), Positives = 227/406 (55%), Gaps = 45/406 (11%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNN 77
PV H VC A +A K L +V+KAQI A G GV +
Sbjct: 18 PVPDGH----VCYNGA-SAREWAKRLGEGPWVVKAQIHA-------GGRGKGGGVKLAKS 65
Query: 78 VQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVII 137
++ I M+G L T QT G V++V+V NI RE Y +V DR + V+
Sbjct: 66 ASEVQLIARDMLGMTLRTHQTGPEGKVVHRVLVENGCNIARELYVSLVVDRNSSKVAVMA 125
Query: 138 SPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLW 197
S GG DIE VAAKTP + T ID G+T+ FQG
Sbjct: 126 STEGGMDIEEVAAKTPEKIFTETIDPLVGLTQ-----------FQG-------------- 160
Query: 198 NLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISV 257
+KIA L G KA ++ L+ F++ D LE+NPLV T E E++++
Sbjct: 161 --------RKIAFSLGLEGKQVGKAVKMLEALYTTFIACDCAMLEVNPLVVTAEGELLAL 212
Query: 258 DAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMAT 317
DAK FDDNA FR I + E DP E++AS+++L+Y+ + GNIGCLVNGAGLAMAT
Sbjct: 213 DAKFGFDDNALFRHLQIGDMRDFDEEDPNEIEASQHDLSYISLTGNIGCLVNGAGLAMAT 272
Query: 318 MDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGL 377
MDIIK +GG+PANFLDVGGG E + +AF+II SD NV+ ILVN+FGGI+ C IA G+
Sbjct: 273 MDIIKHYGGDPANFLDVGGGATIERVTEAFKIILSDRNVEGILVNIFGGIMKCDVIATGV 332
Query: 378 VNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+ A + L +PLVVRLEGTNV++GK +L +S L ++ A + +AA
Sbjct: 333 IQAARQVALKVPLVVRLEGTNVEKGKELLAQSGLDIVAADGMADAA 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + L +PLVVRLEGTNV++GK +L +S L ++ A + +AA ++A
Sbjct: 329 ATGVIQAARQVALKVPLVVRLEGTNVEKGKELLAQSGLDIVAADGMADAAQKIVMA 384
>gi|373857307|ref|ZP_09600049.1| succinyl-CoA synthetase, beta subunit [Bacillus sp. 1NLA3E]
gi|372452957|gb|EHP26426.1| succinyl-CoA synthetase, beta subunit [Bacillus sp. 1NLA3E]
Length = 399
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/381 (41%), Positives = 223/381 (58%), Gaps = 40/381 (10%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTG 102
L K V+KAQI AGGRG GV N+ ++ +++G L+T QT G
Sbjct: 38 LGTKVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVRTYATEILGKTLVTHQTGPEG 90
Query: 103 INVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
V ++++ + +I +E Y +V DR + V++ S GGT+IE VA TP + ID
Sbjct: 91 KEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEATPEKIFKEQID 150
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
G+T FQ A++IA + +L +A
Sbjct: 151 PIIGLTA-----------FQ----------------------ARRIAFSINIPKELVNQA 177
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
+ L+ F+ D EINPLV T + +V+++DAK+NFDDNA +RQK + + ++ E
Sbjct: 178 VKFMLGLYTAFIENDCAIAEINPLVTTGDGKVMALDAKLNFDDNALYRQKEVLAYRDLDE 237
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
D +E++ASKY+L+YV +DGNIGC+VNGAGLAMATMDI+K + G+PANFLDVGGG E
Sbjct: 238 EDSKEIEASKYDLSYVSLDGNIGCMVNGAGLAMATMDIVKHYSGDPANFLDVGGGATAEK 297
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
+ +AF+II SD NVK I VN+FGGI+ C IA G+V A K L +PLVVRLEGTNV G
Sbjct: 298 VTEAFKIILSDPNVKGIFVNIFGGIMKCDVIATGVVEAAKQVGLEVPLVVRLEGTNVDLG 357
Query: 403 KRILDESKLPLIFASDLDEAA 423
K+IL+ES L +I A + + A
Sbjct: 358 KKILNESGLSIIAAESMADGA 378
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV GK+IL+ES L +I A + + A +
Sbjct: 329 ATGVVEAAKQVGLEVPLVVRLEGTNVDLGKKILNESGLSIIAAESMADGAQKIV 382
>gi|161075765|gb|ABX56630.1| succinyl-CoA synthetase subunit beta [Methylacidiphilum infernorum
V4]
Length = 394
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 228/394 (57%), Gaps = 35/394 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A +I LN V+KAQI AGGR G F NGF+ GV N+ +++ + EKMIG
Sbjct: 26 ETPQEAFDIAIKLNTTPLVVKAQISAGGRAKGKFVNGFEGGVKICNSPEEVKQVAEKMIG 85
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT TG V KV+V++S+++ +E Y + + + S +GG +IE +A
Sbjct: 86 GLLVTAQTGTTGQPVRKVIVSESIDVAKELYLSLTYSYAEAAILAMGSLAGGVNIERIAL 145
Query: 151 KTPH-LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+ P LVK K + LW+ L A +
Sbjct: 146 ENPQALVK------------------------------KYFYPEEPLWDFQLREFAAQ-- 173
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L F+G + ++ L+ F++ DAT EINPL E ++DAKI DDN+ F
Sbjct: 174 --LGFKGKPLVDFSKILKSLFYAFINHDATLCEINPLALDKENRFWALDAKITIDDNSLF 231
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R+ + + DP+E++A +Y +NYVG++G IGC+VNGAGLAMATMDI++ GG+PA
Sbjct: 232 RRNELLGYRFETVYDPQELEALRYGVNYVGLEGQIGCMVNGAGLAMATMDILERFGGKPA 291
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG ++ + AFR++ S+ N+K IL+N+FGGI+ C IA+ +V A K+ +P
Sbjct: 292 NFLDVGGGADQSQLQNAFRVLLSNPNLKVILINIFGGIMRCDLIAEAIVEAAKNHPPKVP 351
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+++RLEGT V+EGK+IL S L +FA DL+EAA
Sbjct: 352 IIIRLEGTRVEEGKKILKGSALQYVFAGDLEEAA 385
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++V A K+ +P+++RLEGT V+EGK+IL S L +FA DL+EAA
Sbjct: 336 AEAIVEAAKNHPPKVPIIIRLEGTRVEEGKKILKGSALQYVFAGDLEEAA 385
>gi|189219057|ref|YP_001939698.1| Succinyl-CoA synthetase, beta subunit [Methylacidiphilum infernorum
V4]
gi|189185915|gb|ACD83100.1| Succinyl-CoA synthetase, beta subunit [Methylacidiphilum infernorum
V4]
Length = 395
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 228/394 (57%), Gaps = 35/394 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A +I LN V+KAQI AGGR G F NGF+ GV N+ +++ + EKMIG
Sbjct: 27 ETPQEAFDIAIKLNTTPLVVKAQISAGGRAKGKFVNGFEGGVKICNSPEEVKQVAEKMIG 86
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT TG V KV+V++S+++ +E Y + + + S +GG +IE +A
Sbjct: 87 GLLVTAQTGTTGQPVRKVIVSESIDVAKELYLSLTYSYAEAAILAMGSLAGGVNIERIAL 146
Query: 151 KTPH-LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
+ P LVK K + LW+ L A +
Sbjct: 147 ENPQALVK------------------------------KYFYPEEPLWDFQLREFAAQ-- 174
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
L F+G + ++ L+ F++ DAT EINPL E ++DAKI DDN+ F
Sbjct: 175 --LGFKGKPLVDFSKILKSLFYAFINHDATLCEINPLALDKENRFWALDAKITIDDNSLF 232
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
R+ + + DP+E++A +Y +NYVG++G IGC+VNGAGLAMATMDI++ GG+PA
Sbjct: 233 RRNELLGYRFETVYDPQELEALRYGVNYVGLEGQIGCMVNGAGLAMATMDILERFGGKPA 292
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG ++ + AFR++ S+ N+K IL+N+FGGI+ C IA+ +V A K+ +P
Sbjct: 293 NFLDVGGGADQSQLQNAFRVLLSNPNLKVILINIFGGIMRCDLIAEAIVEAAKNHPPKVP 352
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+++RLEGT V+EGK+IL S L +FA DL+EAA
Sbjct: 353 IIIRLEGTRVEEGKKILKGSALQYVFAGDLEEAA 386
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++V A K+ +P+++RLEGT V+EGK+IL S L +FA DL+EAA
Sbjct: 337 AEAIVEAAKNHPPKVPIIIRLEGTRVEEGKKILKGSALQYVFAGDLEEAA 386
>gi|188581004|ref|YP_001924449.1| malate--CoA ligase subunit beta [Methylobacterium populi BJ001]
gi|179344502|gb|ACB79914.1| succinyl-CoA synthetase, beta subunit [Methylobacterium populi
BJ001]
Length = 390
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 161/387 (41%), Positives = 218/387 (56%), Gaps = 41/387 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
+ +KAQI AG RG G+ ++ ++G +L+T QT G V +
Sbjct: 43 WAVKAQIHAGARGKA-------GGIKLCRTYNEVRDAARDLLGKRLVTLQTGPEGKPVQR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
V V + RE Y V DR VI S GG DIE +AAK P + + ++ G+
Sbjct: 96 VYVETADPFERELYLGYVLDRKAERVRVIASQRGGMDIEEIAAKEPEALIQVVVEPAVGL 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
+ A++IA FQ L K + A +
Sbjct: 156 QQFQAREIA----FQLGLNIKQVS-----------------------------AAVKTIM 182
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
+ F D T LEINPLV T + V+++DAK++FDDNA FR++NI ++ S+ DPRE
Sbjct: 183 NAYRAFRDCDGTMLEINPLVVTKDDRVLALDAKMSFDDNALFRRRNIADMHDPSQGDPRE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
A+++NL+Y+G+DG IGC+VNGAGLAMATMD+IK GGEPANFLDVGGG + + + AF
Sbjct: 243 AQAAEHNLSYIGLDGEIGCIVNGAGLAMATMDMIKHAGGEPANFLDVGGGASPDRVATAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
R++ SD NVK ILVN+F GI C +A+G+V A + K+ +PLVVRL GTNV+EGK+IL
Sbjct: 303 RLVLSDRNVKAILVNIFAGINRCDWVAEGVVKAAREVKIDVPLVVRLAGTNVEEGKKILA 362
Query: 408 ESKLPLIFASDLDEAA-SLVNACKSFK 433
ES L LI A L EAA V AC+ K
Sbjct: 363 ESGLDLITADTLTEAARKAVEACRGAK 389
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A + K+ +PLVVRL GTNV+EGK+IL ES L LI A L EAA
Sbjct: 329 AEGVVKAAREVKIDVPLVVRLAGTNVEEGKKILAESGLDLITADTLTEAAR 379
>gi|157803807|ref|YP_001492356.1| succinyl-CoA synthetase subunit beta [Rickettsia canadensis str.
McKiel]
gi|189081785|sp|A8EYY8.1|SUCC_RICCK RecName: Full=Succinyl-CoA ligase [ADP-forming] subunit beta;
AltName: Full=Succinyl-CoA synthetase subunit beta;
Short=SCS-beta
gi|157785070|gb|ABV73571.1| succinyl-CoA synthetase subunit beta [Rickettsia canadensis str.
McKiel]
Length = 386
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/382 (41%), Positives = 221/382 (57%), Gaps = 40/382 (10%)
Query: 43 LNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTG 102
LN + YV+KAQI AGGRG GV + ++ I M G L+T QT G
Sbjct: 38 LNTEVYVVKAQIHAGGRGKA-------GGVKVVKSKEEAKKIAHDMFGINLVTHQTGPQG 90
Query: 103 INVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPID 162
V ++ + +I +E YF IV DR + I S +GG DIE VA KTP + +D
Sbjct: 91 QKVKRLYIESGCDILKEYYFSIVFDRSASCITFIASTAGGVDIEEVAKKTPEKIVKFSVD 150
Query: 163 VHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKA 222
G+ + + IA L F+ D + K E+
Sbjct: 151 PATGLQDFHMRGIAYELGFK-DNQVKQMKEI----------------------------- 180
Query: 223 ATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSE 282
V+ ++N F+ DATQ+EINPL+ + +++++DAKI FD+NA F+ N+ + + E
Sbjct: 181 ---VKSVYNAFIETDATQIEINPLIVKTDGDLLALDAKITFDENALFKHPNVTAMRDYDE 237
Query: 283 SDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEES 342
DP E A+ L+YV MDGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG + E
Sbjct: 238 EDPLETRAANAGLSYVKMDGNIGCMVNGAGLAMATMDIIKLYGALPANFLDVGGGADCER 297
Query: 343 IIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEG 402
I +AF+II SD V+ +LVN+FGGI+ C I++G++ A K + +PLVVRL GTNV++G
Sbjct: 298 IKEAFKIILSDKKVQGVLVNIFGGIMRCDIISEGIIAAAKEIDIKVPLVVRLAGTNVEKG 357
Query: 403 KRILDESKLPLIFASDLDEAAS 424
K+IL S L +I A DL +AA+
Sbjct: 358 KKILSNSGLEIITAHDLADAAN 379
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 472 SLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
++ A K + +PLVVRL GTNV++GK+IL S L +I A DL +AAN + A
Sbjct: 331 GIIAAAKEIDIKVPLVVRLAGTNVEKGKKILSNSGLEIITAHDLADAANKIVEA 384
>gi|418897782|ref|ZP_13451852.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIGC341D]
gi|377760817|gb|EHT84693.1| succinyl-CoA ligase [ADP-forming] subunit beta [Staphylococcus
aureus subsp. aureus CIGC341D]
Length = 374
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/391 (40%), Positives = 228/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+LN YV+KAQI AGGRG GV T ++ ++ ++++G
Sbjct: 14 AEEAVEKAKELNSDVYVVKAQIHAGGRGKA-------GGVKITKSLSEVETYAKELLGKT 66
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++ + + I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 67 LVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQVTLMASEEGGTEIEEVAAKT 126
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ FQ A++IA +
Sbjct: 127 PEKIFKETIDPVIGLS-----------PFQ----------------------ARRIAFNI 153
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ KAA + L+N+F+ D + +EINPLV T + +V+++DAKINFDDNA FR K
Sbjct: 154 NIPKESVNKAAKFLLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHK 213
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
++ ++ E DP+E++ASK++L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 214 DVVELRDLEEEDPKEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 273
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D GG E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K L++PLVV
Sbjct: 274 DAGGSATREKVTEAFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVV 333
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV+ GK+IL +S L + A+ + E A
Sbjct: 334 RLEGTNVELGKKILKDSGLAIEPAATMAEGA 364
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV+ GK+IL +S L + A+ + E A +
Sbjct: 315 AEGIVEAVKEVDLTLPLVVRLEGTNVELGKKILKDSGLAIEPAATMAEGAQKIV 368
>gi|386319470|ref|YP_006015633.1| succinyl-CoA synthetase subunit beta [Staphylococcus
pseudintermedius ED99]
gi|323464641|gb|ADX76794.1| succinyl-CoA synthetase, beta subunit [Staphylococcus
pseudintermedius ED99]
Length = 388
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 229/392 (58%), Gaps = 40/392 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L YV+KAQI AGGRG GV ++ ++ +++G
Sbjct: 28 AEEAVEKAKELVTDVYVVKAQIHAGGRGKA-------GGVKIAKSLSEVEAYANELLGKV 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + NI +E Y V DR + ++ S GGT+IE VAAK
Sbjct: 81 LVTHQTGPEGKEVKRLYIEEGANIQKEYYVGFVIDRATDRVTLMASEEGGTEIEEVAAKN 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G+ A+ IA F ++ ++ + K FL +L
Sbjct: 141 PEKIFKETIDPVIGLAPYQARRIA----FNINIPKESINKAVK----FLIAL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T E +V+++D+KINFDDNA FR K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVLTGEGDVLALDSKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMD I G PANFL
Sbjct: 228 DIVELRDLEEEDPKEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDTINHFNGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMRCDIIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAAS 424
RLEGTNV+EGK+IL +S L + A+ + E A
Sbjct: 348 RLEGTNVKEGKQILKDSGLAIEPANTMAEGAQ 379
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+EGK+IL +S L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVKEGKQILKDSGLAIEPANTMAEGAQKIV 382
>gi|311030144|ref|ZP_07708234.1| succinyl-CoA synthetase subunit beta [Bacillus sp. m3-13]
Length = 386
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 228/393 (58%), Gaps = 40/393 (10%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A K+L + V+KAQI AGGRG GV N+ ++ +++G LIT
Sbjct: 31 AVEAAKELGTEVCVVKAQIHAGGRGKA-------GGVKVAKNLDEVREYAGEILGKTLIT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
QT G V ++++ + +I +E Y +V DR + V++ S GGT+IE VA +TP
Sbjct: 84 HQTGPEGKEVKRLLIEEGCDIKKEYYIGLVLDRATSRVVLMASEEGGTEIEEVAEQTPEK 143
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +D G+T FQ A++IA +
Sbjct: 144 IFKEVVDPVVGLTG-----------FQ----------------------ARRIAFNINIP 170
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+L +A + L+ F+ D + EINPLV T + +V+++DAK+NFD NA +R K+I
Sbjct: 171 KELVGQAVKFMMSLYTAFVEKDCSIAEINPLVVTGDAKVMALDAKLNFDSNALYRHKDIL 230
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++ E D +E++ASKY+L+Y+ +DGNIGC+VNGAGLAMATMDIIK +GG+PANFLDVG
Sbjct: 231 EYRDLEEEDAKEIEASKYDLSYISLDGNIGCMVNGAGLAMATMDIIKHYGGDPANFLDVG 290
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG E + +AF+II SD NVK I VN+FGGI+ C IA G+V A K L +PLVVRLE
Sbjct: 291 GGATAEKVTEAFKIILSDDNVKGIFVNIFGGIMKCDIIATGVVEAAKQVGLEVPLVVRLE 350
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNA 428
GTNV GK+IL ES L ++ A + + A + A
Sbjct: 351 GTNVDLGKQILRESGLNIVAAESMADGAQKIVA 383
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L +PLVVRLEGTNV GK+IL ES L ++ A + + A +
Sbjct: 329 ATGVVEAAKQVGLEVPLVVRLEGTNVDLGKQILRESGLNIVAAESMADGAQKIV 382
>gi|257464603|ref|ZP_05628974.1| succinyl-CoA synthetase subunit beta [Actinobacillus minor 202]
gi|257450263|gb|EEV24306.1| succinyl-CoA synthetase subunit beta [Actinobacillus minor 202]
Length = 389
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 155/401 (38%), Positives = 227/401 (56%), Gaps = 40/401 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPI 84
+ + + A N LK LN + + K Q+ AGGRG GV +N Q+
Sbjct: 20 SQGIACQSADETVNALKRLNGEVWAAKCQVHAGGRGKA-------GGVKLVHNEQEARAF 72
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+ +G++L+T QT G VN + + ++ I E Y V DR + + S +GG +
Sbjct: 73 ADYWLGNRLVTFQTDSRGQPVNTIYIEETCQIAHELYLGAVIDRSSQKVIFMASSAGGMN 132
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE VA KTP L+ + +D G +++A L + D EV++ ++F+
Sbjct: 133 IEEVAEKTPELIHKVALDPLVGGQPYQGRELAFKLGLKND-------EVKQFSHIFV--- 182
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
+L LF+ D LE+NPLV T + ++I +DAK+ D
Sbjct: 183 -----------------------QLSKLFIEKDLALLEVNPLVVTQQGQLICLDAKMVID 219
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
NA +R + + + S+ DPRE +A+K+ LNYV ++GNIGC+VNGAGLAM TMDI+KLH
Sbjct: 220 SNALYRHPELLALQDPSQEDPREAEAAKWQLNYVALEGNIGCMVNGAGLAMGTMDIVKLH 279
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
GG+PANFLDVGGG +E + +AF++I SD NVK +LVN+FGGIV C IA+G++ A
Sbjct: 280 GGQPANFLDVGGGTTKERVAEAFKLILSDQNVKAVLVNIFGGIVRCDLIAEGIIAAVNEV 339
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASL 425
+ +P+VVRLEGTN + G+ IL +S L L+ A+ L EAA L
Sbjct: 340 GVQVPIVVRLEGTNAELGREILAKSGLSLLVANTLKEAAIL 380
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + +P+VVRLEGTN + G+ IL +S L L+ A+ L EAA
Sbjct: 329 AEGIIAAVNEVGVQVPIVVRLEGTNAELGREILAKSGLSLLVANTLKEAA 378
>gi|392399486|ref|YP_006436087.1| succinyl-CoA synthetase subunit beta [Flexibacter litoralis DSM
6794]
gi|390530564|gb|AFM06294.1| succinyl-CoA synthetase, beta subunit [Flexibacter litoralis DSM
6794]
Length = 404
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 168/412 (40%), Positives = 240/412 (58%), Gaps = 45/412 (10%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKEY-VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQD 80
V S DKV A+ L++ ++ V+KAQI AGGRG G +GV + +D
Sbjct: 25 VDSADKVV-----EASKELREQTGTDWIVVKAQIHAGGRGKGTVVGTDYNGVMLGKSPED 79
Query: 81 IPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNIT-----RETYFCIVQDRLHNGPVV 135
++++G+ L+T QT + G VNKV++A+ V +E Y ++ DR N V+
Sbjct: 80 AAEKAKQLLGNVLVTHQTGEEGKKVNKVLLAQDVYYKGESEIKEFYVAVLLDRDKNCNVI 139
Query: 136 IISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQK 195
+ S GG DIE VA P + ID G+ AQ +A F LK KA E+ K
Sbjct: 140 MASREGGMDIEEVAESNPDAIIKEWIDPKLGLQPFQAQKVA----FALGLKGKALKEMTK 195
Query: 196 LWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVI 255
++ L+ ++ +DA+Q+EINP +T + V+
Sbjct: 196 F-----------------------------IKSLYAAYIGIDASQVEINPAFKTSDDRVL 226
Query: 256 SVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAM 315
+VD+KI+ DDNA +R K++ + + SE P EV+AS++ LNYV +DGN+GC+VNGAGLAM
Sbjct: 227 AVDSKIDLDDNAFYRHKDLAALRDESEESPLEVEASQFGLNYVKLDGNVGCMVNGAGLAM 286
Query: 316 ATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAK 375
ATMD+IKL GGEPANFLDVGGG + E++ + FRII D NVK IL+N+FGGIV C +A
Sbjct: 287 ATMDMIKLAGGEPANFLDVGGGASAETVEKGFRIILKDPNVKAILINIFGGIVRCDRVAN 346
Query: 376 GLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
G+V A K+ K+ +P++VRL+GTN +EG I+ S L +I A+ L EAA V
Sbjct: 347 GVVEAYKNIGKIDVPIIVRLQGTNAEEGAEIIKGSGLNVISATVLKEAADRV 398
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 470 AASLVNACKSF-KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A +V A K+ K+ +P++VRL+GTN +EG I+ S L +I A+ L EAA+
Sbjct: 345 ANGVVEAYKNIGKIDVPIIVRLQGTNAEEGAEIIKGSGLNVISATVLKEAAD 396
>gi|114330621|ref|YP_746843.1| malate--CoA ligase subunit beta [Nitrosomonas eutropha C91]
gi|114307635|gb|ABI58878.1| succinyl-CoA synthetase (ADP-forming) beta subunit [Nitrosomonas
eutropha C91]
Length = 390
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 228/384 (59%), Gaps = 42/384 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSG-VHFTNNVQDIPPILEKMIGHKLITKQTP 99
+++ +V+KAQI +G RG K+G + + Q+I E ++G KL+T QT
Sbjct: 36 REIGSNVWVVKAQIHSGARG--------KAGAIKICRSHQEIETAAESLLGKKLVTHQTG 87
Query: 100 KTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTI 159
TG +K+ + +I RE Y ++ DR H V++ S GG DIE +A P +K I
Sbjct: 88 PTGKLCSKLYIEAGTDIAREVYLALMIDRSHERIVMVGSAQGGMDIETLAVTNPGAIKKI 147
Query: 160 PIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLK 219
I+ G+ QD FQ A+ +A L G+L
Sbjct: 148 HIEPAVGL-----QD------FQ----------------------ARTMAFSLGLDGELL 174
Query: 220 AKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNE 279
A ++ + +DA LEINPLV T E+I++DAK++FD+NA FR+ + +
Sbjct: 175 NHAIKTIRGCYRALRDLDANILEINPLVVTRNNELIALDAKMSFDENALFRRHRVSELRD 234
Query: 280 VSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVN 339
++ DPREV A++ L+YVG+DG+IGC++NGAGLAMATMD+IKL GGEPANFLDVGGG +
Sbjct: 235 NTQIDPREVAAAEAGLSYVGLDGDIGCMINGAGLAMATMDMIKLAGGEPANFLDVGGGAS 294
Query: 340 EESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNV 399
E +AFR++ +DSNVK +LVN+F GI C IA+G+V A ++ ++PLVVRL GTNV
Sbjct: 295 AERTEKAFRLVLADSNVKAMLVNIFAGINRCDWIAEGVVQAVRNIGTTVPLVVRLSGTNV 354
Query: 400 QEGKRILDESKLPLIFASDLDEAA 423
+EG+RI+ +S LP+I A L EAA
Sbjct: 355 EEGRRIIADSGLPIITAETLAEAA 378
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A ++ ++PLVVRL GTNV+EG+RI+ +S LP+I A L EAA
Sbjct: 329 AEGVVQAVRNIGTTVPLVVRLSGTNVEEGRRIIADSGLPIITAETLAEAA 378
>gi|289549229|ref|YP_003474217.1| succinyl-CoA synthetase subunit beta [Thermocrinis albus DSM 14484]
gi|289182846|gb|ADC90090.1| succinyl-CoA synthetase, beta subunit [Thermocrinis albus DSM
14484]
Length = 382
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 227/388 (58%), Gaps = 44/388 (11%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + ++L V+KAQ+ GGRG GV ++++++ +E M+G L T
Sbjct: 31 AQRVAEELGSFPLVVKAQVHCGGRGKA-------GGVKLVHSMEELTQAVESMLGKVLKT 83
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
Q P+ G V++V + K+ I +E YF I DR PV++ S GG +IE VA + P
Sbjct: 84 FQCPE-GKPVSRVWIEKATPIKKEYYFSITLDRSAAKPVIMASAEGGMEIEEVAKEKPDA 142
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ + +D G+ S A+ IA L V + L L+
Sbjct: 143 ILMLHVDPALGLMPSQARKIAFRL----------GLPVDRFVPLALN------------- 179
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+ L++ +DA+ +E+NPLV T+E +++ +DAK++ DDNA R ++I
Sbjct: 180 -------------LYKLYMDLDASLVEVNPLVLTEEGDLVILDAKVDVDDNALMRHRDIQ 226
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++++ DP EV+A KY LNY+ +DGNIGC+VNGAGLAM TMDIIKL GG PANFLDVG
Sbjct: 227 EMEDLTQLDPLEVEAKKYGLNYIKLDGNIGCMVNGAGLAMTTMDIIKLAGGNPANFLDVG 286
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + E I AFRI+ +D NVK + +N+FGGI+ C +A GL+ A K +S+P+VVR+E
Sbjct: 287 GGASVEQIANAFRILMADPNVKAVFINIFGGILRCDRLASGLIEAAKMVDISVPVVVRME 346
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV+EGKR+L ES L + A D+ + A
Sbjct: 347 GTNVEEGKRMLAESGLRFVTAEDMWDGA 374
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A+ L+ A K +S+P+VVR+EGTNV+EGKR+L ES L + A D+ + A
Sbjct: 325 ASGLIEAAKMVDISVPVVVRMEGTNVEEGKRMLAESGLRFVTAEDMWDGAR 375
>gi|307946997|ref|ZP_07662332.1| malate--CoA ligase subunit beta [Roseibium sp. TrichSKD4]
gi|307770661|gb|EFO29887.1| malate--CoA ligase subunit beta [Roseibium sp. TrichSKD4]
Length = 398
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 223/392 (56%), Gaps = 41/392 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
+++ +++++KAQI AGGRG GV + Q+I E M G KL+T QT
Sbjct: 36 REMGGEKWIVKAQIHAGGRGKA-------GGVKLCADDQEIQAACEAMFGRKLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G + +V V +V I RE Y V DR +++ S GG +IE+++A+ P
Sbjct: 89 EGKGIYRVYVEAAVPIDREIYLGFVLDRTSQRIMIVASAEGGMEIEDISAEKP------- 141
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I S + +FQ A++IA L L
Sbjct: 142 ----DSIVRSTVEPAVGLRDFQ----------------------AREIAFKLGIEPGLTQ 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+Q + F +DAT +EINPLV T + V+++DAK+ FD NA FR I +
Sbjct: 176 SMVRTLQGCYRAFRDLDATMVEINPLVITGDNRVLALDAKMTFDGNALFRHPQISELRDK 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
S+ DPRE A+ L+YVG+DGNIGC+VNGAGLAMATMD IKL GGEPANFLD+GGG
Sbjct: 236 SQEDPRESRAADRGLSYVGLDGNIGCIVNGAGLAMATMDTIKLAGGEPANFLDIGGGATP 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + +AFR++ SD NV+ +LVN+F GI C +A+G+V A K ++ +P++VRL GTNV+
Sbjct: 296 ERVAKAFRLVMSDKNVQAVLVNIFAGINRCDWVAEGVVQALKEVQVDVPVIVRLAGTNVE 355
Query: 401 EGKRILDESKLPLIFASDLDEAASL-VNACKS 431
EG++IL +S LP+I A+ L EAA V+A KS
Sbjct: 356 EGQKILAKSGLPIIRATTLMEAAERSVSAWKS 387
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A K ++ +P++VRL GTNV+EG++IL +S LP+I A+ L EAA
Sbjct: 329 AEGVVQALKEVQVDVPVIVRLAGTNVEEGQKILAKSGLPIIRATTLMEAA 378
>gi|110678492|ref|YP_681499.1| malate--CoA ligase subunit beta [Roseobacter denitrificans OCh 114]
gi|109454608|gb|ABG30813.1| malate-CoA ligase, beta subunit, putative [Roseobacter
denitrificans OCh 114]
Length = 399
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 230/415 (55%), Gaps = 48/415 (11%)
Query: 9 IANFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGF 68
+ANF V + +S ++ A+ ++L + +V+KAQI AGGRG
Sbjct: 12 LANFGVAVPDGALAYSPEQ--------ASYRARELGGERWVVKAQIHAGGRGKA------ 57
Query: 69 KSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDR 128
GV + +I E+M G K+IT QT G + +V V +V I RE Y V DR
Sbjct: 58 -GGVKVCESDVEIQKASEEMFGKKMITHQTGPEGKGIYRVYVEAAVPIDREIYLGFVLDR 116
Query: 129 LHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAK 188
+++ S GG +IE ++ K P + I ++ + EFQ
Sbjct: 117 TTQRVMIVASAEGGMEIEEISEKRP-----------ESIVRAIVEPAVGLREFQ------ 159
Query: 189 AATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVE 248
++IA L L + +Q + F +DAT +EINPLV
Sbjct: 160 ----------------CRQIAFKLGVDAGLTQQMVRTLQGCYRAFTELDATMVEINPLVI 203
Query: 249 TDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLV 308
T + VI++DAK+ FDDNA FR I + S+ DPRE A+ L+YVG+DGNIGC+V
Sbjct: 204 TADNRVIALDAKMTFDDNALFRHPQISELRDKSQEDPRESRAADRGLSYVGLDGNIGCIV 263
Query: 309 NGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIV 368
NGAGLAMATMD IKL GGEPANFLD+GGG E + +AFR++ SD +V+ ILVN+F GI
Sbjct: 264 NGAGLAMATMDTIKLAGGEPANFLDIGGGATPERVAKAFRLVLSDKSVQAILVNIFAGIN 323
Query: 369 NCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
C +A+G+V A + ++ +P++VRL GTNV+EG++IL +S LP+I A+ L EAA
Sbjct: 324 RCDWVAEGVVQALREVQVDVPVIVRLAGTNVEEGQKILAQSGLPIIRATTLMEAA 378
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V A + ++ +P++VRL GTNV+EG++IL +S LP+I A+ L EAA
Sbjct: 329 AEGVVQALREVQVDVPVIVRLAGTNVEEGQKILAQSGLPIIRATTLMEAA 378
>gi|406836672|ref|ZP_11096266.1| succinyl-CoA synthetase subunit beta [Schlesneria paludicola DSM
18645]
Length = 395
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 223/385 (57%), Gaps = 36/385 (9%)
Query: 49 VIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
V+K+QI AGGRG G F + + GV + + +M+ L+T QT G V+
Sbjct: 44 VVKSQIHAGGRGKGTFKQHPEQRGVVVIKSAEAAKDNAARMLTSTLVTLQTGAEGKVVST 103
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+++ + + I RE Y +V DR GP++I S GG DIE VA KTP + P DV G+
Sbjct: 104 LLIEEGLKIARELYLGVVVDRESGGPILIASTEGGMDIEVVAHKTPEKILREPFDVEAGL 163
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
A+++A + L L ++ + A+ L ++
Sbjct: 164 RGYQARNVA--------------------YRLGLEGVSVRAAEKL-------------LR 190
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
+L F+ D + +EINPLV T +++ DAK+ FDDNA FR +++ +++E +P E
Sbjct: 191 QLCQFFIDYDCSMVEINPLVVTAAGDLVVGDAKVTFDDNALFRHQDLLPLRDLTEEEPME 250
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
V A L+YV +DGN+GCLVNGAGLAM+TMDIIK HGG PANFLDVGGG N E + +AF
Sbjct: 251 VQAQAAGLSYVKLDGNLGCLVNGAGLAMSTMDIIKYHGGAPANFLDVGGGANVEQVTEAF 310
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
RII +D NVK ILVN+FGGI+ C TI L+ A +++PLVVRLEGTNV+ +++L
Sbjct: 311 RIILADPNVKGILVNIFGGIMKCDTIVTALLTAYDKIGITVPLVVRLEGTNVELARKMLA 370
Query: 408 ESKLPLIFASDLDEAASLVNACKSF 432
+S P+ +DL +AA A KS
Sbjct: 371 DSGKPITVGTDLTDAAK--KAVKSL 393
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 472 SLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
+L+ A +++PLVVRLEGTNV+ +++L +S P+ +DL +AA
Sbjct: 339 ALLTAYDKIGITVPLVVRLEGTNVELARKMLADSGKPITVGTDLTDAAK 387
>gi|357386206|ref|YP_004900930.1| succinyl-CoA ligase (ADP-forming) beta chain [Pelagibacterium
halotolerans B2]
gi|351594843|gb|AEQ53180.1| succinyl-CoA ligase (ADP-forming) beta chain [Pelagibacterium
halotolerans B2]
Length = 396
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 220/369 (59%), Gaps = 36/369 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV ++ ++ + M+G+ L+T QT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSIDEVVANVRDMLGNTLVTAQTGDAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y ++ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYCSLLVDRSVGKVAFVVSTEGGMDIEQVAHDTPEKIVTVAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G++ + +I+ L+ +G AA E K +LF +
Sbjct: 163 AGVSAANVTEISSALKLEG-----AAAEDAK--SLFPA---------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D LEINPL+ + + +DAK++FD NA FR +I + + +E D
Sbjct: 194 ----LYKAFVEKDMALLEINPLIVMTDGHLRVLDAKVSFDGNALFRHSDIVALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASK++L YV MDGNIGC+VNGAGLAMATMDII L+G EPANF DVGGG ++E +
Sbjct: 250 AKEIEASKWDLAYVPMDGNIGCMVNGAGLAMATMDIIHLYGKEPANFCDVGGGASKEKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D V+ ILVN+FGGI+ C IA+G+V A K L+IPLVVRLEGTNV+ GK+
Sbjct: 310 AAFKIITADPKVEGILVNIFGGIMKCDVIAEGVVAAVKEVGLTIPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPL 413
IL+ES L +
Sbjct: 370 ILNESGLAI 378
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPL 509
A +V A K L+IPLVVRLEGTNV+ GK+IL+ES L +
Sbjct: 339 AEGVVAAVKEVGLTIPLVVRLEGTNVELGKKILNESGLAI 378
>gi|350552337|ref|ZP_08921540.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Thiorhodospira
sibirica ATCC 700588]
gi|349794508|gb|EGZ48322.1| Succinyl-CoA ligase (ADP-forming) subunit beta [Thiorhodospira
sibirica ATCC 700588]
Length = 389
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/413 (39%), Positives = 235/413 (56%), Gaps = 48/413 (11%)
Query: 11 NFSYLVKPVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKS 70
++ + P V S D++ A+ L ++V KAQI AG RG
Sbjct: 14 DYGIALPPAVAVRSLDELPQACAQ--------LGGDQWVAKAQIYAGSRG-------KAG 58
Query: 71 GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLH 130
G+ ++ ++E M+G +L+T QT G+ V+ V++ V I RE Y ++ DR H
Sbjct: 59 GIRVAKGTAELREVVEAMLGSQLVTPQTGPEGLPVHTVLLETPVAIARELYVGLLVDRSH 118
Query: 131 NGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAA 190
+++S +GGTDIE VAA+TP + T+ +D IA + +Q
Sbjct: 119 GRITLVVSDAGGTDIEEVAAQTPERIITLFLD-----------PIAGLMPYQ-------- 159
Query: 191 TEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETD 250
A++ A L +G T + +L+ LFL+VDAT +EINPLV
Sbjct: 160 --------------ARRAAFGLNLQGAQINALVTLLTQLYRLFLAVDATLIEINPLVVDA 205
Query: 251 EREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNG 310
+ ++++DAKI DDNA +RQ + + +VS+ D REV A + LNY+ + GNIGC+VNG
Sbjct: 206 DGTLMALDAKITLDDNALYRQTALAALRDVSQEDEREVKAREQALNYIHLGGNIGCMVNG 265
Query: 311 AGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNC 370
AGLAMATMD+IKLHGGEPANFLDVGGG E + AF++I D V+ + VN+FGGIV C
Sbjct: 266 AGLAMATMDLIKLHGGEPANFLDVGGGTTAERVTYAFKLILEDPAVRAVFVNIFGGIVRC 325
Query: 371 ATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
IA+G++ A + + +P+VVRLEGTNV +G+ +L S L +I ASDL + A
Sbjct: 326 DLIAEGIIQAVREVGVKVPVVVRLEGTNVDQGRELLQASGLNIITASDLTDGA 378
>gi|253701392|ref|YP_003022581.1| succinyl-CoA synthetase subunit beta [Geobacter sp. M21]
gi|251776242|gb|ACT18823.1| succinyl-CoA synthetase, beta subunit [Geobacter sp. M21]
Length = 392
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/406 (42%), Positives = 227/406 (55%), Gaps = 45/406 (11%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNN 77
PV H VC A +A K L +V+KAQI A G GV +
Sbjct: 18 PVPDGH----VCYNGA-SAREWAKRLGEGPWVVKAQIHA-------GGRGKGGGVKLAKS 65
Query: 78 VQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVII 137
++ I M+G L T QT G V++V+V NI RE Y +V DR + V+
Sbjct: 66 AGEVQLIARDMLGMTLRTHQTGPEGKVVHRVLVENGCNIARELYVSLVVDRNSSKVAVMA 125
Query: 138 SPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLW 197
S GG DIE VAAKTP + T ID G+T+ FQG
Sbjct: 126 STEGGMDIEEVAAKTPEKIFTETIDPLVGLTQ-----------FQG-------------- 160
Query: 198 NLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISV 257
+KIA L G KA ++ L+ F++ D LE+NPLV T E E++++
Sbjct: 161 --------RKIAFSLGLEGKQVGKAVKMLEALYTTFIACDCAMLEVNPLVVTAEGELLAL 212
Query: 258 DAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMAT 317
DAK FDDNA FR I + E DP E++AS+++L+Y+ + GNIGCLVNGAGLAMAT
Sbjct: 213 DAKFGFDDNALFRHLQIGDMRDFDEEDPNEIEASQHDLSYISLTGNIGCLVNGAGLAMAT 272
Query: 318 MDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGL 377
MDIIK +GG+PANFLDVGGG E + +AF+II SD NV+ ILVN+FGGI+ C IA G+
Sbjct: 273 MDIIKHYGGDPANFLDVGGGATIERVTEAFKIILSDKNVEGILVNIFGGIMKCDVIATGV 332
Query: 378 VNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
+ A + L +PLVVRLEGTNV++GK +L +S L ++ A + +AA
Sbjct: 333 IQAARQVALKVPLVVRLEGTNVEKGKELLAQSGLDIVAADGMADAA 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A + L +PLVVRLEGTNV++GK +L +S L ++ A + +AA ++A
Sbjct: 329 ATGVIQAARQVALKVPLVVRLEGTNVEKGKELLAQSGLDIVAADGMADAAQKIVMA 384
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,719,844,065
Number of Sequences: 23463169
Number of extensions: 317378503
Number of successful extensions: 822568
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3400
Number of HSP's successfully gapped in prelim test: 346
Number of HSP's that attempted gapping in prelim test: 804632
Number of HSP's gapped (non-prelim): 13318
length of query: 525
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 378
effective length of database: 8,910,109,524
effective search space: 3368021400072
effective search space used: 3368021400072
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)