BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7785
(525 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z2I8|SUCB2_MOUSE Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
OS=Mus musculus GN=Suclg2 PE=2 SV=3
Length = 433
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/389 (51%), Positives = 271/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A+ A K LN KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG+
Sbjct: 66 AKEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYN 125
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR HNGPV++ SP GG DIE VAA +
Sbjct: 126 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASS 185
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 186 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 212
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA ++ KL++LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 213 GFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 273 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 332
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + +AF++++SD V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 333 DLGGGVKEAQVYEAFKLLTSDPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 392
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE + IL S LP+ A DL++
Sbjct: 393 RLEGTNVQEAQNILKSSGLPITSAVDLED 421
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE + IL S LP+ A DL++
Sbjct: 374 ANGITKACRELELKVPLVVRLEGTNVQEAQNILKSSGLPITSAVDLED 421
>sp|Q96I99|SUCB2_HUMAN Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
OS=Homo sapiens GN=SUCLG2 PE=1 SV=2
Length = 432
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/389 (52%), Positives = 270/389 (69%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F++G K GVH T + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIFEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK++AA ++ KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 392 RLEGTNVQEAQKILNNSGLPITSAIDLED 420
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNVQE ++IL+ S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVQEAQKILNNSGLPITSAIDLED 420
>sp|P53589|SUCB2_CAEEL Probable succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial OS=Caenorhabditis elegans GN=C50F7.4 PE=3
SV=1
Length = 415
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/380 (53%), Positives = 260/380 (68%), Gaps = 35/380 (9%)
Query: 47 EYVIKAQILAGGRGLGHFDNGFKS--GVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
EYV+KAQILAGGRG G F NG K GV T +++MIG +L+TKQT G+
Sbjct: 61 EYVVKAQILAGGRGKGKFINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVR 120
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
V+KVM+A+ V+I RETY ++ DR NGPVV+ SP GG DIE VA KTP + PID+
Sbjct: 121 VDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQ 180
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+TE Q L KIA L+F G L AA
Sbjct: 181 MGMTEG-----------------------QSL----------KIAKDLQFEGKLIGVAAQ 207
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
E+++L++LF++VDATQ+EINPLVET + V VDAK+NFDD+A +RQK IF+ E D
Sbjct: 208 EIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSAAYRQKEIFAYETFEEHD 267
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
PREVDA ++NLNY+GMDGNI CLVNGAGLAMATMD+IKLHGGEPANFLDVGG V E+++
Sbjct: 268 PREVDAHQFNLNYIGMDGNIACLVNGAGLAMATMDLIKLHGGEPANFLDVGGAVTEDAVF 327
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
A RII+SD VKC+L+N+FGGIVNCATIA G+V+A L++P+VVRLEGTNV K+
Sbjct: 328 NAVRIITSDPRVKCVLINIFGGIVNCATIANGVVSAVNKIGLNVPMVVRLEGTNVDAAKQ 387
Query: 405 ILDESKLPLIFASDLDEAAS 424
I+ +S L ++ A++LDEAA+
Sbjct: 388 IMKKSGLKILTANNLDEAAA 407
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A +V+A L++P+VVRLEGTNV K+I+ +S L ++ A++LDEAA
Sbjct: 357 ANGVVSAVNKIGLNVPMVVRLEGTNVDAAKQIMKKSGLKILTANNLDEAA 406
>sp|P53590|SUCB2_PIG Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
(Fragment) OS=Sus scrofa GN=SUCLG2 PE=1 SV=2
Length = 433
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 66 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYN 125
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ VNKVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 126 LATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 185
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 186 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 212
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G L+ +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 213 GFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 272
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 273 DIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 332
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 333 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 392
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV E + IL S LP+ A DL++AA
Sbjct: 393 RLEGTNVHEAQNILTNSGLPITSAVDLEDAA 423
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++AA
Sbjct: 374 ANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAA 423
>sp|Q9YI36|SUCB2_COLLI Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
(Fragment) OS=Columba livia GN=SUCLG2 PE=1 SV=1
Length = 391
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/391 (50%), Positives = 269/391 (68%), Gaps = 33/391 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
+ A A + L KE V+KAQILAGGRG G F++G K GVH T + + + + ++MIG
Sbjct: 22 DSANDALEAAQRLKAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKIVEQLAKQMIG 81
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
+ L TKQTPK G+ V KVMVA+++NI+RETYF I+ DR NGPV++ SP GG DIE VA
Sbjct: 82 YNLSTKQTPKDGVTVKKVMVAEALNISRETYFAILMDRACNGPVMVGSPQGGVDIEEVAV 141
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P L+ ID+ +GI + A +A L F+G L+ +AA +++KL+N
Sbjct: 142 TSPELIFKEEIDIFEGIKDHQALQMAKNLGFKGPLQQQAADQIKKLYN------------ 189
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
LFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFR
Sbjct: 190 ---------------------LFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFR 228
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
QK IF+ ++ SE++P E +A+KY+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PAN
Sbjct: 229 QKEIFAMDDKSENEPIENEAAKYDLKYIGLDGNIACFVNGAGLAMATCDIISLNGGKPAN 288
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLD+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PL
Sbjct: 289 FLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITRACRELELKVPL 348
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
VVRLEGTNV E +RIL+ES LP++ A+DL++
Sbjct: 349 VVRLEGTNVHEAQRILNESGLPIMSANDLED 379
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E +RIL+ES LP++ A+DL++
Sbjct: 332 ANGITRACRELELKVPLVVRLEGTNVHEAQRILNESGLPIMSANDLED 379
>sp|Q3MHX5|SUCB2_BOVIN Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
OS=Bos taurus GN=SUCLG2 PE=2 SV=1
Length = 432
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/389 (51%), Positives = 266/389 (68%), Gaps = 33/389 (8%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K LN KE V+KAQILAGGRG G F +G K GVH T + + + + ++MIG+
Sbjct: 65 ANEALEAAKRLNAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYN 124
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L TKQTPK G+ V KVMVA++++I+RETY I+ DR NGPV++ SP GG DIE VAA
Sbjct: 125 LATKQTPKEGVKVKKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASN 184
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P L+ ID+ +GI +S AQ ++A+ L
Sbjct: 185 PELIFKEQIDIIEGIKDSQAQ---------------------------------RMAENL 211
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
F G LK +AA +++KL+NLFL +DATQ+E+NP ET E +V+ DAKINFDDNAEFRQK
Sbjct: 212 GFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQK 271
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+IF+ ++ SE++P E +A++Y+L Y+G+DGNI C VNGAGLAMAT DII L+GG+PANFL
Sbjct: 272 DIFAMDDKSENEPIENEAARYDLKYIGLDGNIACFVNGAGLAMATCDIIFLNGGKPANFL 331
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
D+GGGV E + QAF+++++D V+ ILVN+FGGIVNCA IA G+ AC+ +L +PLVV
Sbjct: 332 DLGGGVKESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVV 391
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDE 421
RLEGTNV E + IL S LP+ A DL++
Sbjct: 392 RLEGTNVHEAQNILSNSGLPITSAVDLED 420
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A + AC+ +L +PLVVRLEGTNV E + IL S LP+ A DL++
Sbjct: 373 ANGITKACRELELKVPLVVRLEGTNVHEAQNILSNSGLPITSAVDLED 420
>sp|Q869S7|SUCB2_DICDI Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=scsB PE=3 SV=1
Length = 420
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/378 (51%), Positives = 253/378 (66%), Gaps = 34/378 (8%)
Query: 47 EYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINV 105
E V+KAQ+ AGGRG G F + GFK GVH ++ + ++M+G L+TKQT K G V
Sbjct: 67 ELVVKAQVHAGGRGKGSFIETGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKV 126
Query: 106 NKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQ 165
VM+A+SV+ RE YF IV DR + GPV+I SP GG DIE+VA +TP L+ PID+ +
Sbjct: 127 QSVMLAESVDPKRELYFAIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVK 186
Query: 166 GITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATE 225
GI +++A+ L F G+ KAK A + +
Sbjct: 187 GIRPEQTKNLAEKLGFTGE-KAKIAQQ--------------------------------Q 213
Query: 226 VQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDP 285
++ L+ LF+ DATQ+EINP ET + +VI +DAKINFDDNA FRQK IF + +E DP
Sbjct: 214 MENLYQLFIKSDATQVEINPFAETTDGQVICMDAKINFDDNASFRQKEIFEMRDTAEEDP 273
Query: 286 REVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQ 345
REV+A K+ LNY+G+DGNIGC+VNGAGLAMATMDIIKL GG PANFLDVGG +E+++ +
Sbjct: 274 REVEAGKFGLNYIGLDGNIGCMVNGAGLAMATMDIIKLKGGIPANFLDVGGSASEQAVTE 333
Query: 346 AFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRI 405
AF+I++ D VKC+LVN+FGGI+ C IA G+VNA K L IPLVVRLEGTNV GK I
Sbjct: 334 AFKILTKDPRVKCLLVNIFGGIMKCDIIASGIVNASKQVGLKIPLVVRLEGTNVNIGKEI 393
Query: 406 LDESKLPLIFASDLDEAA 423
L++S L + ASDLD+AA
Sbjct: 394 LEKSGLNITSASDLDDAA 411
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 37/50 (74%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A+ +VNA K L IPLVVRLEGTNV GK IL++S L + ASDLD+AA
Sbjct: 362 ASGIVNASKQVGLKIPLVVRLEGTNVNIGKEILEKSGLNITSASDLDDAA 411
>sp|Q84LB6|SUCB_SOLLC Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Solanum lycopersicum PE=1 SV=1
Length = 417
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/380 (49%), Positives = 251/380 (66%), Gaps = 34/380 (8%)
Query: 44 NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
N E V+K+Q+LAGGRGLG F NGF+ GVH Q I KM+G L+TKQT G
Sbjct: 64 NQSEVVVKSQVLAGGRGLGTFKNGFQGGVHIVKADQ-AEDIASKMLGQILVTKQTGAQGK 122
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
V+KV + + +++ E YF I+ DR GP++I GGT IE++A K P ++ +PIDV
Sbjct: 123 VVSKVYLCEKMSLVNEMYFSIILDRATAGPLIIACRKGGTSIEDLAEKFPDMIIKVPIDV 182
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
+GI+++ A + D LA K+AD R D +
Sbjct: 183 FKGISDADAAKVVD-------------------------GLAPKVAD----RND----SI 209
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
+V+KL+ LF D T LEINPL ET + ++++ DAK+NFDDNA +RQK IFS + S+
Sbjct: 210 EQVKKLYKLFCETDCTMLEINPLAETSDNKLVAADAKLNFDDNAAYRQKEIFSLRDSSQE 269
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG E +
Sbjct: 270 DPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNATEGQV 329
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
++AF+I+++D VK ILVN+FGGI+ C IA G+VNA K +L +P++VRLEGTNV++GK
Sbjct: 330 VEAFKILTADEKVKAILVNIFGGIMKCDVIASGIVNAAKQVQLKVPVIVRLEGTNVEQGK 389
Query: 404 RILDESKLPLIFASDLDEAA 423
RIL ES + LI A DLD+AA
Sbjct: 390 RILKESGMKLITAEDLDDAA 409
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K +L +P++VRLEGTNV++GKRIL ES + LI A DLD+AA + A
Sbjct: 360 ASGIVNAAKQVQLKVPVIVRLEGTNVEQGKRILKESGMKLITAEDLDDAAEKAVKA 415
>sp|O82662|SUCB_ARATH Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1
Length = 421
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/380 (49%), Positives = 245/380 (64%), Gaps = 34/380 (8%)
Query: 44 NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGI 103
N E V+K+QILAGGRGLG F +G K GVH + I KM+G L+TKQT G
Sbjct: 67 NESELVVKSQILAGGRGLGTFKSGLKGGVHIVKR-DEAEEIAGKMLGQVLVTKQTGPQGK 125
Query: 104 NVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDV 163
V+KV + + +++ E YF I+ DR GP++I GGT IE++A K P ++ +PIDV
Sbjct: 126 VVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDV 185
Query: 164 HQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAA 223
GIT+ A + D LA K AD + +
Sbjct: 186 FAGITDEDAAKVVD-------------------------GLAPKAAD--------RKDSI 212
Query: 224 TEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSES 283
+V+KL+ LF D T LEINPL ET ++++ DAK+NFDDNA FRQK +F+ + ++
Sbjct: 213 EQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQE 272
Query: 284 DPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESI 343
DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVGG +E +
Sbjct: 273 DPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQV 332
Query: 344 IQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGK 403
++AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLEGTNV++GK
Sbjct: 333 VEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGK 392
Query: 404 RILDESKLPLIFASDLDEAA 423
RIL ES + LI A DLD+AA
Sbjct: 393 RILKESGMKLITADDLDDAA 412
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV++GKRIL ES + LI A DLD+AA + A
Sbjct: 363 ASGIVNAAKEVALKVPVVVRLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKA 418
>sp|Q6K9N6|SUCB_ORYSJ Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0621700 PE=1
SV=1
Length = 422
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/388 (48%), Positives = 252/388 (64%), Gaps = 36/388 (9%)
Query: 38 NILKDL--NFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
N LK++ + KE V+K+QILAGGRGLG F +G + GVH ++ + KM+G L+T
Sbjct: 60 NTLKNVFPSEKEIVVKSQILAGGRGLGTFKSGLQGGVHIVK-AEEAESLAAKMLGQILVT 118
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT G V+KV + + +++ E YF I DR GP++I GGT IE++A K P +
Sbjct: 119 KQTGPQGKIVSKVYLCEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDM 178
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ +PIDV +GIT+ A + D LA K AD
Sbjct: 179 IIKVPIDVFKGITDDDAAKVVD-------------------------GLAPKTAD----- 208
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ + +++KL+ LF D T LEINPL ET + ++++ DAK+NFDDNA FRQK IF
Sbjct: 209 ---RQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKEIF 265
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ + ++ DPREV A+K +LNY+G+DG IGC+VNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 266 AMRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVG 325
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G +E +++AF+I++SD VK ILVN+FGGI+ C IA G+VNA K L +P+VVRLE
Sbjct: 326 GSASEGQVVEAFKILTSDDRVKAILVNIFGGIMKCDVIASGIVNAAKQVDLKVPVVVRLE 385
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAA 423
GTNV +GKRIL ES + LI A DLD+AA
Sbjct: 386 GTNVDQGKRILKESGMTLITAEDLDDAA 413
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A+ +VNA K L +P+VVRLEGTNV +GKRIL ES + LI A DLD+AA + A
Sbjct: 364 ASGIVNAAKQVDLKVPVVVRLEGTNVDQGKRILKESGMTLITAEDLDDAAEKAVKA 419
>sp|Q03184|SUCB_TRIVA Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal
OS=Trichomonas vaginalis PE=1 SV=1
Length = 407
Score = 351 bits (901), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 183/401 (45%), Positives = 246/401 (61%), Gaps = 35/401 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHF-DNGFKSGVHFTNNVQDIPPILEKMIGHKLI 94
A + +N VIKAQ+ GGRG GH+ + GFKSGVHF + + I ++M+GH L+
Sbjct: 40 AAEAFRKMNLPAAVIKAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLV 99
Query: 95 TKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPH 154
TKQT K G+ VM++ V + RE YF I+ DR PVVI S GG +IE VAA P
Sbjct: 100 TKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPE 159
Query: 155 LVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEF 214
+ +D +GITE +A++I+ L G K ++
Sbjct: 160 KIHKFVLDGVEGITEEVAKNISTKLGLTG-----------KAYD---------------- 192
Query: 215 RGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNI 274
E+QKLW LF+ DATQ+E+NPL ET + +I+VD+K NFDD+A +RQK I
Sbjct: 193 ------NGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQI 246
Query: 275 FSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDV 334
F ++ + +P E+ A KY LNYV +DGN+ CLVNGAGLAMATMD+IKL GG+PANFLD+
Sbjct: 247 FGYRDLKQVNPFEIRAEKYGLNYVPLDGNVACLVNGAGLAMATMDVIKLAGGDPANFLDL 306
Query: 335 GGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRL 394
GG +E ++ + F IIS S+VK ILVN+FGGIV C +A G++ A K L +PLVVRL
Sbjct: 307 GGAASEAAVTEGFTIISQQSHVKAILVNIFGGIVRCDMVAAGVIAAFKKVGLKVPLVVRL 366
Query: 395 EGTNVQEGKRILDESKLPLIFASDLDEAA-SLVNACKSFKL 434
EGTNV+ GK+++ ES LP+I A +L +A V A K K
Sbjct: 367 EGTNVEAGKKLIRESGLPIISADNLTDAGEKAVKAAKGEKF 407
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
AA ++ A K L +PLVVRLEGTNV+ GK+++ ES LP+I A +L +A
Sbjct: 346 AAGVIAAFKKVGLKVPLVVRLEGTNVEAGKKLIRESGLPIISADNLTDAG 395
>sp|Q55AI5|SUCB1_DICDI Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Dictyostelium discoideum GN=scsC PE=3 SV=1
Length = 445
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/393 (45%), Positives = 249/393 (63%), Gaps = 33/393 (8%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E A I + +N ++ V+KAQ+LAGGRG G F +G K GV ++ +D+ KM+G
Sbjct: 60 ETPEEAEKIAEVMNTQDLVVKAQVLAGGRGKGIFTSGLKGGVQLCSSAEDVKKFASKMLG 119
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
H L+TKQT + G V++V V + + +E YF I+ DR GPV++ SP GG DIE VA
Sbjct: 120 HTLVTKQTGEDGKVVHQVYVTERHFLRKEMYFAILMDRKAGGPVMVASPEGGVDIEGVAR 179
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P + PID+ G+ + +A+ L F N+ S+AQ
Sbjct: 180 DNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFSKK-------------NI---SMAQ---- 219
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+++KL++ F+ D T +EINPL ET +V+ +DAK+NFDDNA FR
Sbjct: 220 -------------DQMKKLYDFFIKNDCTLVEINPLAETASGDVLCMDAKLNFDDNAAFR 266
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
+IF + S+ DPREV A++++LNY+G+DGNIGCLVNGAGLAMA+MDIIKL+GG PAN
Sbjct: 267 HPDIFKLRDKSQEDPREVKAAEFDLNYIGLDGNIGCLVNGAGLAMASMDIIKLYGGSPAN 326
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++ + +A ++ISSD VK ILVN+FGGI+ C IA G++ A K ++ PL
Sbjct: 327 FLDVGGGATQKQVTEAIKLISSDKKVKSILVNIFGGIMKCDVIALGIIAALKELSIATPL 386
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRL+GTNV+ K+I+++S L LI A +LD+AA
Sbjct: 387 VVRLQGTNVEAAKKIMEDSGLRLIAADNLDDAA 419
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K ++ PLVVRL+GTNV+ K+I+++S L LI A +LD+AA
Sbjct: 370 ALGIIAALKELSIATPLVVRLQGTNVEAAKKIMEDSGLRLIAADNLDDAAQ 420
>sp|B2UMH5|SUCC_AKKM8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Akkermansia
muciniphila (strain ATCC BAA-835) GN=sucC PE=3 SV=1
Length = 393
Score = 342 bits (878), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 185/400 (46%), Positives = 252/400 (63%), Gaps = 33/400 (8%)
Query: 22 VHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDI 81
V + + A+ A +++ +YV+KAQ+ AGGRG G F NGFK GVH +V+++
Sbjct: 17 VATPKGIAASTAQEAAQTARNMGLSQYVVKAQVHAGGRGKGTFKNGFKGGVHVVKSVEEV 76
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ KM+ L+TKQT + G V+K+MVA++V++ +E YF I+QDR PV++ S G
Sbjct: 77 EEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYFAILQDRARECPVIVASTEG 136
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VAA P + + + I +L L FQ
Sbjct: 137 GMDIEEVAATRPEAI------IREHINPALG-----ILPFQ------------------- 166
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
A KIA LE G L +A + ++ LF ++D + +EINPLV T + V ++DAK
Sbjct: 167 ---ALKIAVALELTGPLLRQATKLITNVYKLFTALDCSLVEINPLVVTTDDRVCALDAKF 223
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
NFDDNA +R I + +E DPREV+A KY+LNY+G+DGNIGC+VNGAGLAMATMDII
Sbjct: 224 NFDDNALYRHPEIMEMRDETEEDPREVEAGKYDLNYIGLDGNIGCMVNGAGLAMATMDII 283
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
K +GGEPANFLDVGG EE + AFRI++SD NVK +LVN+FGGI+ C IA+G+V A
Sbjct: 284 KYYGGEPANFLDVGGSATEEMVTNAFRILTSDKNVKALLVNIFGGIMRCDVIAQGIVAAA 343
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 421
K+ + IPLVVRLEGTNV+ GK+IL +S + +I A +LDE
Sbjct: 344 KNIDMKIPLVVRLEGTNVEIGKKILADSGIAIIPADNLDE 383
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDE 517
A +V A K+ + IPLVVRLEGTNV+ GK+IL +S + +I A +LDE
Sbjct: 336 AQGIVAAAKNIDMKIPLVVRLEGTNVEIGKKILADSGIAIIPADNLDE 383
>sp|Q4R517|SUCB1_MACFA Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Macaca fascicularis GN=SUCLA2 PE=2 SV=1
Length = 463
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 245/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAVAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ T PID+ +GI + A LAQK+ F
Sbjct: 203 IITEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA++ NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAQANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI++C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMSCDVIAQGIVTALKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIAGSGLKILACDDLDEAARMV 440
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 388 AQGIVTALKDLEIKIPVVVRLQGTRVDDAKALIAGSGLKILACDDLDEAARMVV 441
>sp|O97580|SUCB1_PIG Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
(Fragment) OS=Sus scrofa GN=SUCLA2 PE=2 SV=1
Length = 425
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 183/391 (46%), Positives = 243/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 45 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 104
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 105 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEA 164
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 165 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 191
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL+NLFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 192 PSIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 251
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 252 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 311
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 312 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 371
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 372 GTRVDDAKALIADSGLKILACDDLDEAAKMV 402
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 350 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 403
>sp|Q9P2R7|SUCB1_HUMAN Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Homo sapiens GN=SUCLA2 PE=1 SV=3
Length = 463
Score = 339 bits (869), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA++P
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IIKEPIDIEEGIKKEQAL-----------------------------QLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL++LFL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 PNIVESAAENMVKLYSLFLKYDATMIEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K NLNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKANLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAARMV 440
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAARMVV 441
>sp|Q9Z2I9|SUCB1_MOUSE Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Mus musculus GN=Sucla2 PE=1 SV=2
Length = 463
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 181/391 (46%), Positives = 247/391 (63%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F +G K GV + ++ + +MIG KLIT
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLIT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+ P
Sbjct: 143 KQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI K +A T LAQK+ F
Sbjct: 203 IVKEPIDIVEGIK-----------------KEQAVT------------LAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
++ AA + KL+NLFL DAT +EINP+VE + +V+ +DAKINFD N+ +RQK IF
Sbjct: 230 SNIVDSAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ S+ D R+ +A+ ++NY+G+DG+IGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWSQEDERDKEAANADINYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + + +AF++I+SD V+ ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVQQVTEAFKLITSDKKVQAILVNIFGGIMRCDVIAQGIVMAVKDLEIRIPVVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIRIPVVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>sp|Q148D5|SUCB1_BOVIN Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Bos taurus GN=SUCLA2 PE=2 SV=1
Length = 463
Score = 335 bits (858), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/391 (46%), Positives = 242/391 (61%), Gaps = 33/391 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A I K L K+ VIKAQ+LAGGRG G F++G K GV + ++ + +MIG KL T
Sbjct: 83 AYAIAKKLGSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFT 142
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
KQT + G N+V+V + RE YF I +R GPV+I S GG +IE+VAA+TP
Sbjct: 143 KQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEA 202
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ PID+ +GI + A LAQK+ F
Sbjct: 203 IVKEPIDIVEGIKKEQA-----------------------------VRLAQKMG----FP 229
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
+ AA + KL++ FL DAT +EINP+VE + V+ +DAKINFD N+ +RQK IF
Sbjct: 230 ASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDSDGAVLCMDAKINFDSNSAYRQKKIF 289
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
+ ++ D R+ DA+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PANFLDVG
Sbjct: 290 DLQDWTQEDERDKDAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPANFLDVG 349
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
GG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K ++ IP+VVRL+
Sbjct: 350 GGATVHQVTEAFKLITSDKKVLSILVNIFGGIMRCDVIAQGIVMAVKDLEIKIPIVVRLQ 409
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLV 426
GT V + K ++ +S L ++ DLDEAA +V
Sbjct: 410 GTRVDDAKALIADSGLKILACDDLDEAAKMV 440
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K ++ IP+VVRL+GT V + K ++ +S L ++ DLDEAA +
Sbjct: 388 AQGIVMAVKDLEIKIPIVVRLQGTRVDDAKALIADSGLKILACDDLDEAAKMVV 441
>sp|Q9YI37|SUCB1_COLLI Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
(Fragment) OS=Columba livia GN=SUCLA2 PE=1 SV=1
Length = 413
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/397 (46%), Positives = 242/397 (60%), Gaps = 36/397 (9%)
Query: 33 ART---ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMI 89
ART A I K++ K+ VIKAQ+LAGGRG G F+ G K GV + ++ + +MI
Sbjct: 27 ARTPDEAYKIAKEIGSKDLVIKAQVLAGGRGKGTFEGGLKGGVKIVFSPEEAKAVSSRMI 86
Query: 90 GHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVA 149
G KL TKQT + G N+V V + RE YF I +R GPV+I S GG +IE+VA
Sbjct: 87 GKKLFTKQTGEKGRICNQVFVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVA 146
Query: 150 AKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIA 209
A+ P + PID+ +GI + A LAQK+
Sbjct: 147 AENPDAIIKEPIDIVEGIKKEQA-----------------------------VRLAQKMG 177
Query: 210 DFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEF 269
F +L +AA + KL+NLFL DAT +EINP+VE V+ +DAKINFD N+ +
Sbjct: 178 ----FPSNLVDEAAENMIKLYNLFLKYDATMIEINPMVEDASGVVMCMDAKINFDSNSAY 233
Query: 270 RQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPA 329
RQK IF + ++ D R+ A+K +LNY+G+DGNIGCLVNGAGLAMATMDIIKLHGG PA
Sbjct: 234 RQKKIFDMQDWTQEDERDRQAAKADLNYIGLDGNIGCLVNGAGLAMATMDIIKLHGGTPA 293
Query: 330 NFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIP 389
NFLDVGGG + +AF++I+SD V ILVN+FGGI+ C IA+G+V A K L IP
Sbjct: 294 NFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVVAVKDLDLKIP 353
Query: 390 LVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
+VVRL+GT V + K ++ S L ++ DLDEAA +V
Sbjct: 354 VVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMV 390
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L IP+VVRL+GT V + K ++ S L ++ DLDEAA +
Sbjct: 338 AQGIVVAVKDLDLKIPVVVRLQGTRVDDAKALITASGLKILACDDLDEAAKMVV 391
>sp|P53312|SUCB_YEAST Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=LSC2 PE=1 SV=1
Length = 427
Score = 330 bits (847), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/389 (43%), Positives = 234/389 (60%), Gaps = 36/389 (9%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K LN + VIKAQ L GGRG GHFD G+KSGVH + Q + ++M+ H LITKQT
Sbjct: 66 KKLNTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGI 125
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V+ V + K V+ E Y I+ DR P++I S GG +IE VA +TP +K
Sbjct: 126 AGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFS 185
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
I+ +G++ +A+D+A L F D + +AA V L+ +F+
Sbjct: 186 IETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMER----------------- 228
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDE---REVISVDAKINFDDNAEFRQKNIFSQ 277
DATQ+EINPL E + +++ DAK FDDNA FRQ+ I+S
Sbjct: 229 ----------------DATQVEINPLSEIEHDPTHKIMCTDAKFGFDDNASFRQEKIYSW 272
Query: 278 NEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGG 337
++S+ DP EV A KY+LN+V + GNIGCLVNGAGLAMATMD+IKL+GG+PANFLD GGG
Sbjct: 273 RDLSQEDPDEVKAKKYDLNFVKLKGNIGCLVNGAGLAMATMDVIKLNGGDPANFLDCGGG 332
Query: 338 VNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGT 397
E+I Q F +I S+ NV I VN+FGGIV C +A GLV A + ++ +P+V RL+GT
Sbjct: 333 ATPETIKQGFELILSNKNVDAIFVNIFGGIVRCDYVALGLVEAARELEVRVPIVARLQGT 392
Query: 398 NVQEGKRILDESKLPLIFASDLDEAASLV 426
V+EG+ I+++S + + +LD AA V
Sbjct: 393 KVEEGRDIINKSGVKIYSFDELDPAAKKV 421
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A LV A + ++ +P+V RL+GT V+EG+ I+++S + + +LD AA +
Sbjct: 369 ALGLVEAARELEVRVPIVARLQGTKVEEGRDIINKSGVKIYSFDELDPAAKKVV 422
>sp|O94415|SUCB_SCHPO Probable succinyl-CoA ligase [GDP-forming] subunit beta,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC1620.08 PE=3 SV=1
Length = 433
Score = 325 bits (834), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 233/395 (58%), Gaps = 35/395 (8%)
Query: 36 ATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLIT 95
A + +DL + V+KAQ+LAGGRG G FD+G + GV + + E+MIGHKLIT
Sbjct: 53 AEKVARDLKVTDLVVKAQVLAGGRGKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLIT 112
Query: 96 KQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHL 155
+QT G N V V + I +E YF I+ DR + P+++ S GG DIE VAA+ P
Sbjct: 113 RQTGPAGKICNVVYVCERKFIRKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSA 172
Query: 156 VKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFR 215
+ + + +A+++ D L F K KA + K
Sbjct: 173 IIKRSLPNSPNLDPHIAEELVDKLGFSSSSKPKAVDAIVK-------------------- 212
Query: 216 GDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIF 275
L+ +F DATQ+EINPL ET + +V+ +DAK+NFDDNAEFR NIF
Sbjct: 213 -------------LYKVFNDCDATQVEINPLAETTDHKVLCMDAKLNFDDNAEFRHSNIF 259
Query: 276 SQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 335
++S+ DP E A+K LN++ +DGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG
Sbjct: 260 VLRDISQEDPDEARAAKVGLNFIKLDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVG 319
Query: 336 GGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLE 395
G N E+I +AF +I++D I VN+FGGIV C IAKGL++ + L+IP++ RL+
Sbjct: 320 GNANAEAIREAFSLITNDPKTTAIFVNIFGGIVRCDVIAKGLISVVSALNLNIPIICRLQ 379
Query: 396 GTNVQEGKRILDESKLPLIFASDLDEAASLVNACK 430
GTN K +++ S L + DLDEAA AC+
Sbjct: 380 GTNQGAAKEVINNSGLRIFSFDDLDEAAK--KACR 412
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A L++ + L+IP++ RL+GTN K +++ S L + DLDEAA
Sbjct: 358 AKGLISVVSALNLNIPIICRLQGTNQGAAKEVINNSGLRIFSFDDLDEAA 407
>sp|Q2G3G8|SUCC_NOVAD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=sucC PE=3 SV=1
Length = 399
Score = 315 bits (807), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 168/384 (43%), Positives = 235/384 (61%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+KAQI AGGRG G F K GV +++++ ++M+G+ L+T QT + G
Sbjct: 43 YVVKAQIHAGGRGKGKFKELPADAKGGVRLAKSIEEVEAFAKEMLGNTLVTVQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V V+I +E Y +V DR +I+S GG DIE VA TP + TI ID
Sbjct: 103 VNRLYVTDGVDIDKEYYLSMVVDRATGRVAIIVSTEGGMDIEEVAHSTPEKIATIVIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G F+ + + L+ GDL +AA
Sbjct: 163 EG---------------------------------FMPHHGRAVGFALKLSGDLLKQAAK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+ F+++D + LEINPLV+T + ++ +D K++FD NA +R ++ + + +E D
Sbjct: 190 IAEQLYTAFVALDCSMLEINPLVQTKDGNLLVLDTKMSFDSNALYRHPDVVALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++ASKY+L Y+ +DGNIGC+VNGAGLAMATMDIIKL+G PANFLDVGGG N+E +
Sbjct: 250 PAEIEASKYDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGEFPANFLDVGGGANKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II D VK ILVN+FGGI+ C IA+G+V A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILKDPAVKGILVNIFGGIMKCDIIAEGIVAAAKEVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
IL S LP++ A+DL +AA + A
Sbjct: 370 ILANSGLPIVPANDLGDAAKKIVA 393
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K LS+PLVVRLEGTNVQ+GK IL S LP++ A+DL +AA +
Sbjct: 339 AEGIVAAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVPANDLGDAAKKIV 392
>sp|A1UQV9|SUCC_BARBK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella
bacilliformis (strain ATCC 35685 / KC583) GN=sucC PE=3
SV=1
Length = 398
Score = 315 bits (807), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 242/384 (63%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHF---DNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G+F D+ K GV +V+++ +++M+G L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGNFKELDSDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + NI RE Y ++ DR ++S GG DIE VAA+TP + T+ ID
Sbjct: 103 VNRLYIEDGANIERELYLSLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T++ + D L G+ A + +KL+ +
Sbjct: 163 EGVTDADCVKLCDELNLSGN----AREDGEKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LEINPL+ D+ + +DAK++FD+NA FR +I ++SE D
Sbjct: 194 ----LYKAFCEKDMSLLEINPLIVMDDGRLRVLDAKVSFDNNALFRHPDILGLRDISEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASK++L Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKHDLAYIALDGMIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV++GK
Sbjct: 310 HAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVEQGKA 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
I+++S L +I A+DLD+AA + A
Sbjct: 370 IINDSGLNVISANDLDDAAQKIVA 393
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I+++S L +I A+DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVEQGKAIINDSGLNVISANDLDDAAQKIVAA 394
>sp|Q9EYG9|SUCC_RHIME Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium
meliloti (strain 1021) GN=sucC PE=3 SV=1
Length = 398
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 166/385 (43%), Positives = 236/385 (61%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +V ++ + M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + +AD L+ +G+ +A A +KL+ +
Sbjct: 163 KGVTAENLKTLADALKLEGEARADA----EKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 DKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
QAF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 QAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>sp|A7HT39|SUCC_PARL1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=sucC PE=3 SV=1
Length = 389
Score = 309 bits (791), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/391 (43%), Positives = 233/391 (59%), Gaps = 41/391 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K+L +V+KAQI AGGRG GV ++ D+ ++IG L+T QT
Sbjct: 36 KELGGPVWVVKAQIHAGGRGKA-------GGVKVVKSLDDVKKEATRLIGSTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G VN++ + +I+RE Y I+ DR + I+S GG DIE VA KTP + +
Sbjct: 89 DGKEVNRLYIEDGSSISRELYLSILVDRATSRVSFIVSTEGGMDIEEVAKKTPEKILSFS 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
+D GI+ F G +K+A L GD
Sbjct: 149 VDPASGISG-----------FHG----------------------RKVAYALGLEGDQVK 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+ ++KL+ F++ D + LEINPLV T E ++ +DAK+NFD NA +R K+I ++
Sbjct: 176 QGVALIEKLYKAFVTEDMSMLEINPLVVTGEGNLLCLDAKVNFDSNALYRHKDIVELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E DP EV+ASKY+LNY+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG +
Sbjct: 236 TEEDPAEVEASKYDLNYIKLDGKIGCMVNGAGLAMATMDIIKLYGSEPANFLDVGGGATK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + AF+II SD +V+ ILVN+FGGI+ C IA+G++ A K LS+PLVVRLEGTNV
Sbjct: 296 EKVTAAFKIILSDPSVEGILVNIFGGIMRCDIIAEGVIAAAKEVSLSVPLVVRLEGTNVD 355
Query: 401 EGKRILDESKLPLIFASDL-DEAASLVNACK 430
GK+I+ ES LP+I A +L D A +V A K
Sbjct: 356 LGKKIMAESGLPIISADNLADAAEKIVKAVK 386
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K LS+PLVVRLEGTNV GK+I+ ES LP+I A +L +AA + A
Sbjct: 329 AEGVIAAAKEVSLSVPLVVRLEGTNVDLGKKIMAESGLPIISADNLADAAEKIVKA 384
>sp|A6UDP2|SUCC_SINMW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium
medicae (strain WSM419) GN=sucC PE=3 SV=1
Length = 398
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 234/385 (60%), Gaps = 36/385 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV + ++ +M+G+ L+TKQT +G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR ++S GG DIE VA TP + T+ ID
Sbjct: 103 VNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPD 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + + + L+ G+ +A A +KL+ +
Sbjct: 163 KGVTADDLKTLTEALKLDGEARADA----EKLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F+ D + LE+NPL+ + +DAK++FD NA FR +++ + + +E D
Sbjct: 194 ----LYKAFVEKDMSLLEVNPLIVMTNGRMRVLDAKVSFDGNALFRHEDVVALRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DGNIGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
QAF+II++D VK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV+ GK+
Sbjct: 310 QAFKIITADPAVKGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKK 369
Query: 405 ILDESKLPLIFASDLDEAASLVNAC 429
I++ES L +I A DLD+AA + A
Sbjct: 370 IINESGLNVISADDLDDAAQKIVAA 394
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVAA 394
>sp|Q4FP29|SUCC_PELUB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelagibacter
ubique (strain HTCC1062) GN=sucC PE=3 SV=1
Length = 386
Score = 305 bits (780), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/391 (42%), Positives = 239/391 (61%), Gaps = 41/391 (10%)
Query: 41 KDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPK 100
K L +++V+KAQI AGGRG GV N + ++ ++++G L+T QT
Sbjct: 36 KSLKTEKFVLKAQIHAGGRGKA-------GGVKILNTIDELSVAAKELLGKTLVTHQTGP 88
Query: 101 TGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIP 160
G V ++ V +S NI +E Y + DR + V I S GG DIE VA KTP + T
Sbjct: 89 AGREVKRLYVEESSNIDKEFYLSCLVDRASSKIVFISSDQGGMDIEEVAEKTPEKIITTK 148
Query: 161 IDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKA 220
ID+ I+++ + +K+ ++ +AD D K
Sbjct: 149 IDITDEISDA---------------------DCEKIIAIY------ALAD------DAKK 175
Query: 221 KAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEV 280
+A ++ ++ +FL DA +E+NPL+ T E+++I +DAK+NFD NA FR I ++
Sbjct: 176 QAIALIKSVYKMFLGTDANMVEVNPLILTKEKKIICLDAKVNFDSNALFRHPEIIELRDL 235
Query: 281 SESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNE 340
+E DP E+DASK++L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++
Sbjct: 236 NEEDPTEIDASKHDLAYIKLDGSIGCMVNGAGLAMATMDIIKLYGEEPANFLDVGGGASK 295
Query: 341 ESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQ 400
E + A +II SD NVK IL+N+FGGI+ C +A+G+V+A K +S+PLVVRL GTN +
Sbjct: 296 EKVSAALKIILSDKNVKGILINIFGGIMRCDVLAQGVVDAAKEINISVPLVVRLAGTNFK 355
Query: 401 EGKRILDESKLPLIFASDLDEAAS-LVNACK 430
EGK ILD S L LI A +LD+AA +V A K
Sbjct: 356 EGKEILDNSGLKLISAENLDDAAQKIVEAIK 386
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V+A K +S+PLVVRL GTN +EGK ILD S L LI A +LD+AA + A
Sbjct: 329 AQGVVDAAKEINISVPLVVRLAGTNFKEGKEILDNSGLKLISAENLDDAAQKIVEA 384
>sp|B4RCH3|SUCC_PHEZH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Phenylobacterium
zucineum (strain HLK1) GN=sucC PE=3 SV=1
Length = 399
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/388 (42%), Positives = 232/388 (59%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F+ K GV +V ++ E+M+G L+T QT G
Sbjct: 43 FVVKSQIHAGGRGKGRFEGLGPDAKGGVRVVKSVDEVKANAEEMLGRVLVTHQTGAAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + I +E Y ++ DR + V+ S GG DIE VA TP + T ID
Sbjct: 103 VNRLYIEEGAQIAKEFYLSLLVDRETSWVSVVASTEGGMDIEEVAHATPEKIVTFSIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + +A L G L +AAT
Sbjct: 163 TGV---------------------------------FPHHGRHLAKALGLTGGLAKEAAT 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ +L+ FL+ D + LEINPL+ T + + +DAK++FD NA FR ++ + + SE D
Sbjct: 190 LLNQLYAAFLAKDMSMLEINPLIVTGDDHLRVLDAKVSFDSNALFRHADVVALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P+E++ASKY+L+Y+ +DG IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 PKEIEASKYDLSYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDIIAEGVVAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLIFASDL-DEAASLVNACKS 431
I++ES L +I A+DL D A +V A +
Sbjct: 370 IINESGLNVIAANDLSDGAEKIVKAVRG 397
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I++ES L +I A+DL + A + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIINESGLNVIAANDLSDGAEKIVKA 394
>sp|Q3B5J6|SUCC_PELLD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pelodictyon
luteolum (strain DSM 273) GN=sucC PE=3 SV=1
Length = 391
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/383 (43%), Positives = 229/383 (59%), Gaps = 40/383 (10%)
Query: 49 VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNKV 108
VIKAQI AGGRG GV + ++ I +M+G L+T QT G V ++
Sbjct: 48 VIKAQIHAGGRGKA-------GGVKLAKSPEEAHEIASQMLGTTLVTHQTGPEGKEVRRL 100
Query: 109 MVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGIT 168
+V + +NI RE Y I DR + V++IS GG +IE VA +TP L+ I +D G+
Sbjct: 101 LVEEGMNIDREFYVGITLDRATSNNVLMISTEGGMEIEKVAEETPELLLKIQVDARFGLQ 160
Query: 169 ESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQK 228
A++ A FL +G+ +FR A + +
Sbjct: 161 GFQAREAAFFLGLEGE----------------------------QFR-----NAVSFITA 187
Query: 229 LWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPREV 288
L+N + S+DA EINPLV T E V+++DAKINFD NA +R K+ ++SE DP EV
Sbjct: 188 LYNAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYRHKDFIELRDISEEDPFEV 247
Query: 289 DASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAFR 348
+ASK NLNYV +DGN+GC+VNGAGLAMATMD+I+L GG PANFLDVGGG + +++ + F+
Sbjct: 248 EASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGRPANFLDVGGGASPQTVEEGFK 307
Query: 349 IISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDE 408
II SD NVK ILVN+FGGIV C +A G++ A + L++P++VRLEGTN +++LDE
Sbjct: 308 IILSDKNVKAILVNIFGGIVRCDRVAGGIIEAARKIGLNLPVIVRLEGTNADIAQKMLDE 367
Query: 409 SKLPLIFASDLDEAASLVNACKS 431
S L LI A L +AA VN S
Sbjct: 368 SGLNLIAADGLKDAAQKVNQALS 390
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + L++P++VRLEGTN +++LDES L LI A L +AA
Sbjct: 333 AGGIIEAARKIGLNLPVIVRLEGTNADIAQKMLDESGLNLIAADGLKDAA 382
>sp|Q21CW8|SUCC_RHOPB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodopseudomonas
palustris (strain BisB18) GN=sucC PE=3 SV=1
Length = 399
Score = 302 bits (774), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/407 (41%), Positives = 241/407 (59%), Gaps = 37/407 (9%)
Query: 28 VCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPI 84
V + A A K L +V+K+QI AGGRG G F G K GV +++++
Sbjct: 23 VAILKATDAEAAAKQLGGPIWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIEEVKQY 82
Query: 85 LEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTD 144
+M+G L+T QT G VN++ + +I +E Y ++ DR+ + ++S GG +
Sbjct: 83 AAEMLGATLVTIQTGPAGKQVNRLYIEDGSDIEKEFYLSLLVDRVTSRISFVVSTEGGMN 142
Query: 145 IENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSL 204
IE+VA TP + + +D GI + +A L GDL A + ++L
Sbjct: 143 IEDVAHDTPEKIISFSVDPATGIMGHHGRTVAKALGLTGDL----AKQAERL-------- 190
Query: 205 AQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFD 264
V +L+ F+S D LEINPLV T + E+ +DAK++FD
Sbjct: 191 ---------------------VAQLYAAFISKDMEMLEINPLVVTKQGELKCLDAKMSFD 229
Query: 265 DNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLH 324
NA +R +I + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+
Sbjct: 230 GNALYRHPDISALRDETEEDAKEIEASKYDLNYVTLDGTIGCMVNGAGLAMATMDIIKLY 289
Query: 325 GGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSF 384
G PANFLDVGGG N+E + AF+II++D NVK IL+N+FGGI+ C IA+G+V A K
Sbjct: 290 GMTPANFLDVGGGANKEKVTAAFKIITADPNVKGILINIFGGIMKCDIIAEGVVAAVKDV 349
Query: 385 KLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACK 430
L +PLVVRLEGTNV+ GK+I+ ES L ++ A DLD+AA +V A K
Sbjct: 350 GLKVPLVVRLEGTNVEAGKKIIQESGLNVLSADDLDDAAQKIVKAVK 396
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV+ GK+I+ ES L ++ A DLD+AA + A
Sbjct: 339 AEGVVAAVKDVGLKVPLVVRLEGTNVEAGKKIIQESGLNVLSADDLDDAAQKIVKA 394
>sp|Q73FW3|SUCC_WOLPM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia
pipientis wMel GN=sucC PE=3 SV=1
Length = 383
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/395 (43%), Positives = 236/395 (59%), Gaps = 50/395 (12%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ +T + LK F V+KAQI AGGRG GV +V++ ++ MIG
Sbjct: 29 EEVKTQVSQLKSDVF---VVKAQIHAGGRGKA-------GGVKLAKSVEEAQQFVKDMIG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT +G V KV V + +I +E Y +V D + P+ I S GG DIE VA
Sbjct: 79 MTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAK 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQ--KI 208
+P A ++F D+ + + KL + F S Q KI
Sbjct: 139 NSP----------------------AKIVKF--DIDPATSFDSSKLSSRFHLSPEQIEKI 174
Query: 209 ADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAE 268
++ +K+++ F++ DA+Q+EINPLVET+ + I++DAKINFDDNA
Sbjct: 175 SNI--------------AKKIYDAFIATDASQIEINPLVETNSGDFIALDAKINFDDNAL 220
Query: 269 FRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEP 328
+R I + E E++ASKY L+Y+ MDG+IGC+VNGAGLAMATMDIIK +G EP
Sbjct: 221 YRHPEIMELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEP 280
Query: 329 ANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSI 388
ANFLDVGGG ++E++ +AF+II SDSNVK ILVN+FGGI+ C IA G+V A K + +
Sbjct: 281 ANFLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKV 340
Query: 389 PLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
PLVVRL GTN +EGK+IL+ES L +I A +LDEAA
Sbjct: 341 PLVVRLSGTNFEEGKKILEESGLNIIAADELDEAA 375
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN +EGK+IL+ES L +I A +LDEAA +
Sbjct: 326 ASGIVAAAKEMSIKVPLVVRLSGTNFEEGKKILEESGLNIIAADELDEAAQKIV 379
>sp|Q11CV8|SUCC_MESSB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mesorhizobium sp.
(strain BNC1) GN=sucC PE=3 SV=1
Length = 397
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/388 (42%), Positives = 233/388 (60%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
YV+K+QI AGGRG G F K GV +++++ ++M+G+ L+TKQT G
Sbjct: 43 YVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEEVVANAKEMLGNTLVTKQTGPEGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I RE Y I+ DR P ++S GG DIE VA +TP + T+ I
Sbjct: 103 VNRLYIEDGADIARELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKILTLAIAPE 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G+T + L+ G AA + + L+ +
Sbjct: 163 RGVTNDDVTKLNAALKLDG----AAAKDGETLFPI------------------------- 193
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
L+ F D + LE+NPL+ + +DAK++FD+NA FR +++ + SE D
Sbjct: 194 ----LYKAFTEKDMSLLEVNPLIVMQNGRLRVLDAKVSFDNNALFRHEDVVELRDTSEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG ++E +
Sbjct: 250 EKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G++ A K L +PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVDLGKK 369
Query: 405 ILDESKLPLIFASDLDEAA-SLVNACKS 431
I+ +S L +I A DLD+AA +V A KS
Sbjct: 370 IISQSGLNVIPADDLDDAAKKIVAAVKS 397
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV GK+I+ +S L +I A DLD+AA + A
Sbjct: 339 AEGVIAAVKEVGLKVPLVVRLEGTNVDLGKKIISQSGLNVIPADDLDDAAKKIVAA 394
>sp|B9JCF4|SUCC_AGRRK Succinyl-CoA ligase [ADP-forming] subunit beta OS=Agrobacterium
radiobacter (strain K84 / ATCC BAA-868) GN=sucC PE=3
SV=1
Length = 397
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 238/411 (57%), Gaps = 37/411 (9%)
Query: 25 TDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDI 81
D V + A A K L YV+K+QI AGGRG G F K GV +++D+
Sbjct: 20 ADGVAIFSADEAEAAAKQLPGPLYVVKSQIHAGGRGKGKFKELSPDAKGGVRLAKSIEDV 79
Query: 82 PPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSG 141
+ M+G+ L+TKQT G VN++ + +I RE Y I+ DR ++S G
Sbjct: 80 VANSKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEG 139
Query: 142 GTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFL 201
G DIE VA TP + T+ ID G+T + + I+D L+ +G + A KL+ +
Sbjct: 140 GMDIETVAHDTPEKIITVAIDPAAGVTAADSTAISDALKLEGAAREDGA----KLFPI-- 193
Query: 202 SSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKI 261
L+ F+ D LE+NPL+ + +DAK+
Sbjct: 194 ---------------------------LYKAFVEKDMALLEVNPLIVMTNGRLRVLDAKV 226
Query: 262 NFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDII 321
+FD NA FR ++I + + SE D +E+ A +Y+L YV +DGNIGC+VNGAGLAMATMDII
Sbjct: 227 SFDGNALFRHEDIRALRDKSEEDEKEIQAHEYDLAYVALDGNIGCMVNGAGLAMATMDII 286
Query: 322 KLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNAC 381
KL+G EPANFLDVGGG +E + AF+II++D V+ ILVN+FGGI+ C IA+G++ A
Sbjct: 287 KLYGAEPANFLDVGGGATKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVLAAV 346
Query: 382 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA +V A K
Sbjct: 347 KEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKAVKG 397
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV+ GK+I++ES L +I A DLD+AA + A
Sbjct: 339 AEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDDAAQKIVKA 394
>sp|A4YKC6|SUCC_BRASO Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bradyrhizobium
sp. (strain ORS278) GN=sucC PE=3 SV=1
Length = 398
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/405 (41%), Positives = 240/405 (59%), Gaps = 40/405 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEK 87
EDA A K L +V+K+QI AGGRG G F G K GV ++ ++ +
Sbjct: 29 EDADAAA---KTLGGPVWVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVNTFARQ 85
Query: 88 MIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIEN 147
M+G L+T QT G VN++ + +I +E Y ++ DR + ++S GG +IE+
Sbjct: 86 MLGATLVTVQTGPDGKQVNRLYIEDGSDIDKEFYLSLLVDRETSKVAFVVSTEGGVNIED 145
Query: 148 VAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQK 207
VA +TP + T +D G+ + +A L+ GDL A + +KL
Sbjct: 146 VAHETPEKIVTFSVDPATGVMGHHGRAVAKALKLSGDL----AKQAEKLTT--------- 192
Query: 208 IADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNA 267
+L+N F++ D LEINPLV T + ++ +DAK++FD NA
Sbjct: 193 --------------------QLYNAFVAKDMAMLEINPLVVTKQGQLRVLDAKVSFDSNA 232
Query: 268 EFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGE 327
F+ + + + +E D +E++ASKY+LNYV +DG IGC+VNGAGLAMATMDIIKL+G E
Sbjct: 233 LFKHPEVVALRDETEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGME 292
Query: 328 PANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLS 387
PANFLDVGGG ++E + AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L
Sbjct: 293 PANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLK 352
Query: 388 IPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAS-LVNACKS 431
+PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA +V A K
Sbjct: 353 VPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKAVKG 397
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L +PLVVRLEGTNV GK+I+ ES L ++ A +LD+AA + A
Sbjct: 339 AEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDDAAQKIVKA 394
>sp|B3EFL3|SUCC_CHLL2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium
limicola (strain DSM 245 / NBRC 103803) GN=sucC PE=3
SV=1
Length = 392
Score = 299 bits (765), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/397 (42%), Positives = 237/397 (59%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + ++ V+KAQI AGGRG GV + + I +M+G
Sbjct: 30 EAKQAAQQLFEEQGSPVVVVKAQIHAGGRGKA-------GGVKLAKSPDEAMEIARQMLG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V++++V + +NI RE Y I DR + V+++S GG +IE VA
Sbjct: 83 ATLVTHQTGPEGKQVSRLLVEEGMNIDREFYVGITLDRSTSRNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I +D G+ A++ A FL +G+
Sbjct: 143 ETPDKLLKIQVDPLYGLQGFQAREAAFFLGLEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+FR A T + L+N ++++DA+ EINPLV T E V+++DAKINFD NA FR
Sbjct: 177 --QFR-----NAVTFIIALYNAYMTIDASLAEINPLVVTKEGRVLALDAKINFDGNALFR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
KN + +E DP EV+ASK NLNYV +DGN+GC+VNGAGLAMATMD+I+L GG PAN
Sbjct: 230 HKNFLELRDTNEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAGGRPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + E++ + F+II SD NV+ ILVN+FGGIV C +A G++ A + L++P+
Sbjct: 290 FLDVGGGASPETVEEGFKIILSDKNVRAILVNIFGGIVRCDRVAGGIIQAARKIGLNLPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN + +++LDES L LI A+ L +AA+ VN
Sbjct: 350 IVRLEGTNAEIAQKMLDESGLNLIAANGLHDAAAKVN 386
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A + L++P++VRLEGTN + +++LDES L LI A+ L +AA
Sbjct: 333 AGGIIQAARKIGLNLPVIVRLEGTNAEIAQKMLDESGLNLIAANGLHDAA 382
>sp|Q8KFE7|SUCC_CHLTE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium
tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN=sucC
PE=3 SV=1
Length = 392
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/397 (40%), Positives = 234/397 (58%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + ++ + V+KAQI AGGRG GV + +++ I +KM+G
Sbjct: 30 EAKQAAEQLFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEVFEIAQKMLG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V ++++ + +NI +E Y I DR + V+++S GG +IE VA
Sbjct: 83 ATLVTHQTGPEGKEVRRLLIEEGMNIDKEFYLGITLDRTTSSNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I +D G+ A+ A FL QG+
Sbjct: 143 ETPEKLLKIHVDPVYGLQGFQARKAAFFLGLQGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+FR +K ++ L+N + ++DA+ EINPLV T E V+++DAKINFDDNA +R
Sbjct: 177 --QFRNGVKF-----IEALYNAYTTIDASLAEINPLVITKEGRVLALDAKINFDDNALYR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
+ +++E DP E +ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG PAN
Sbjct: 230 HSDFHDLRDITEEDPLEYEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDLIQLSGGRPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + +++ + F+II D NVK ILVN+FGGIV C +A G++ A K+ L +P+
Sbjct: 290 FLDVGGGASSKTVEEGFKIILGDKNVKAILVNIFGGIVRCDRVAGGIIEAAKNIGLKVPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN E +++LDES L LI A L +AA V
Sbjct: 350 IVRLEGTNATEAQKMLDESGLNLISAKGLRDAAEKVQ 386
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K+ L +P++VRLEGTN E +++LDES L LI A L +AA
Sbjct: 333 AGGIIEAAKNIGLKVPVIVRLEGTNATEAQKMLDESGLNLISAKGLRDAA 382
>sp|Q5GSB6|SUCC_WOLTR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia sp.
subsp. Brugia malayi (strain TRS) GN=sucC PE=3 SV=1
Length = 386
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/393 (44%), Positives = 231/393 (58%), Gaps = 43/393 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+A T N LK V+KAQI AGGRG GV + ++ ++ M+G
Sbjct: 29 EEAETKINQLKS---DVLVVKAQIHAGGRGKA-------GGVKLAKSAEEAQQFVKGMLG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V +V + + +I +E Y IV D + P I S GG DIE VA
Sbjct: 79 ITLVTHQTGPNGQQVRRVYIEEGSSIKKEYYLSIVIDPKLSRPAFIFSSEGGMDIEEVAK 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
P + + ID ADF F + +KL N+F S Q
Sbjct: 139 NFPTKIVKLDIDYA-----------ADFASF----------DSRKLSNIFNLSPEQ---- 173
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+E K + +++ F++ DA Q+EINPLVET+ + I++DAKI+FDDNA +R
Sbjct: 174 -IE-------KITNVAKNIYDTFIATDANQIEINPLVETNSGDFIALDAKISFDDNALYR 225
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
I + E E++ASK+ L+Y+ MDGNIGC+VNGAGLAMATMDIIK +G EPAN
Sbjct: 226 HPEIVELRDYDEEVKEEIEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKYYGAEPAN 285
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++E++ +AF+II SDSNVK ILVN+FGGI+ C IA G+V A K + +PL
Sbjct: 286 FLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVEAAKGMSIKVPL 345
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRL GTN ++GKRIL+ES L +I A +LDEAA
Sbjct: 346 VVRLSGTNFEKGKRILEESGLNIIAADELDEAA 378
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN ++GKRIL+ES L +I A +LDEAA +
Sbjct: 329 ASGIVEAAKGMSIKVPLVVRLSGTNFEKGKRILEESGLNIIAADELDEAAQKIV 382
>sp|Q28U74|SUCC_JANSC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Jannaschia sp.
(strain CCS1) GN=sucC PE=3 SV=1
Length = 397
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/418 (40%), Positives = 236/418 (56%), Gaps = 42/418 (10%)
Query: 18 PVSTVHSTDKVCLEDARTATNILKDLNFKEYVIKAQILAGGRGLGHF---DNGFKSGVHF 74
PVS K EDA+TA +++ +V+KAQI AGGRG G F D G GV
Sbjct: 18 PVSDGRVVTKA--EDAKTAAG---EMDGPLWVVKAQIHAGGRGKGKFKEADAGEAGGVRL 72
Query: 75 TNNVQDIPPILEKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPV 134
+ Q+ +KM+G L+T QT G VN++ + I E Y ++ DR +
Sbjct: 73 AKSAQEAADEAKKMLGRTLVTHQTGPVGKQVNRIYIEDGSGIETEMYLALLVDRQSSRIS 132
Query: 135 VIISPSGGTDIENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQ 194
+ S GG DIE VAA TP + + +D G + +A L +G
Sbjct: 133 FVCSTEGGMDIEEVAASTPEKILSFSVDPATGYQPYHGRRVAFSLGLEG----------- 181
Query: 195 KLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREV 254
Q++ ++ G +L+ F D LEINPL+ TDE +
Sbjct: 182 -----------QQVKQCVKLMG-----------QLFTAFQEKDMEMLEINPLIVTDEGNL 219
Query: 255 ISVDAKINFDDNAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLA 314
+DAK++FD NA +R ++ S + +E DP+E+ ASK++LNY+ +DG IGC+VNGAGLA
Sbjct: 220 KVLDAKVSFDGNAVYRHADVASLRDETEEDPKELAASKFDLNYIALDGEIGCMVNGAGLA 279
Query: 315 MATMDIIKLHGGEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIA 374
MATMDIIKL+G EPANFLDVGGG +E + +AF+II+SD VK I VN+FGGI+ C IA
Sbjct: 280 MATMDIIKLYGAEPANFLDVGGGATKEKVTEAFKIITSDPQVKGIFVNIFGGIMRCDIIA 339
Query: 375 KGLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDL-DEAASLVNACKS 431
+G++ A K L +PLVVRLEGTNV++GK I++ S L +I A DL D A +V A K
Sbjct: 340 EGVIAAVKEVGLQMPLVVRLEGTNVEKGKEIINNSGLDVIAADDLKDGAQKIVKAVKG 397
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A ++ A K L +PLVVRLEGTNV++GK I++ S L +I A DL + A + A
Sbjct: 339 AEGVIAAVKEVGLQMPLVVRLEGTNVEKGKEIINNSGLDVIAADDLKDGAQKIVKA 394
>sp|P80886|SUCC_BACSU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus subtilis
(strain 168) GN=sucC PE=1 SV=2
Length = 385
Score = 295 bits (755), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 230/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K L+ YV+KAQI AGGRG GV ++ ++ E+++G
Sbjct: 28 AEEAVESAKSLSSSVYVVKAQIHAGGRGKA-------GGVKIAKSLDEVKAYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYIGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILSESGLNITSAESMADGA 378
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILSESGLNITSAESMADGAQKIV 382
>sp|B4S612|SUCC_PROA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Prosthecochloris
aestuarii (strain DSM 271 / SK 413) GN=sucC PE=3 SV=1
Length = 390
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/406 (42%), Positives = 238/406 (58%), Gaps = 49/406 (12%)
Query: 31 EDARTATNILKDLNFKEY-----VIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPIL 85
E+AR A L F+E V+KAQI AGGRG GV + ++ I
Sbjct: 29 EEARQAAEQL----FEEQENPVVVVKAQIHAGGRGKA-------GGVKLAKSPDEVFDIA 77
Query: 86 EKMIGHKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDI 145
+MIG L+T QT G V +++V + +NI +E Y I DR + V+++S GG +I
Sbjct: 78 RQMIGCTLVTHQTGPEGKEVRRLLVEEGMNIEKEFYVGITLDRATSQNVLMVSTEGGMEI 137
Query: 146 ENVAAKTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLA 205
E VA +TP + I I QG+ A+ A FL +GD
Sbjct: 138 ETVAEETPEKLLKIQIHPLQGLQGFQARQAAFFLGLEGD--------------------- 176
Query: 206 QKIADFLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDD 265
K + ++F + L+ + ++DA+ EINPLV T E +V+++DAKINFD
Sbjct: 177 -KFKNTVKF-----------ITALYKAYTAIDASIAEINPLVITKEGKVMALDAKINFDS 224
Query: 266 NAEFRQKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHG 325
NA FR K+ ++SE DP EV+ASK NLNYV +DGN+GC+VNGAGLAMATMD+I+L G
Sbjct: 225 NALFRHKDFLELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMATMDMIQLAG 284
Query: 326 GEPANFLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFK 385
G+PANFLDVGG + E++ + F+II SD NVK IL+N+FGGIV C +A G++ A K
Sbjct: 285 GKPANFLDVGGSASPETVEEGFKIIMSDKNVKAILINIFGGIVRCDRVAGGVIEAAKKVG 344
Query: 386 LSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKS 431
L +P++VRLEGTN + +++LDES L LI A+ L EAA VN S
Sbjct: 345 LDMPVIVRLEGTNAEIAQKMLDESGLNLIAANGLREAAQKVNEALS 390
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L +P++VRLEGTN + +++LDES L LI A+ L EAA
Sbjct: 333 AGGVIEAAKKVGLDMPVIVRLEGTNAEIAQKMLDESGLNLIAANGLREAAQ 383
>sp|A5VB78|SUCC_SPHWW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sphingomonas
wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=sucC
PE=3 SV=1
Length = 399
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/384 (42%), Positives = 233/384 (60%), Gaps = 36/384 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+KAQI AGGRG G F K GV + ++ ++ M+G+ L+T QT + G
Sbjct: 43 WVVKAQIHAGGRGKGKFKELPADAKGGVRLSKSIDEVKANAADMLGNTLVTIQTGEAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ V +I E Y ++ DR +I+S GG DIE VA TP ++TI ID
Sbjct: 103 VNRLYVTDGADIKSEYYLSMLVDRKTGRIAMIVSTEGGMDIEQVAHDTPEKIRTIVIDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
+G F + +A L+ +GDL +A
Sbjct: 163 EG---------------------------------FQPHHGRAVAFALKLKGDLNKQAVK 189
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
++L+N F++ D + LE+NPLVET + +++ +DAK++FD NA +R +I + + +E D
Sbjct: 190 LAEQLYNAFIATDMSMLEVNPLVETTDGKLLVLDAKVSFDSNALYRHPDILALRDETEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
P E++AS+Y+L Y+ +DG+IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG +E +
Sbjct: 250 PAEIEASQYDLAYIKLDGDIGCMVNGAGLAMATMDIIKLNGMFPANFLDVGGGATKEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II SD VK ILVN+FGGI+ C IA+G++ A K LS+PLVVRLEGTNVQ+GK
Sbjct: 310 AAFKIILSDPAVKGILVNIFGGIMRCDIIAEGIIAAAKEVNLSVPLVVRLEGTNVQQGKD 369
Query: 405 ILDESKLPLIFASDLDEAASLVNA 428
+L S LP++ A DL +AA + A
Sbjct: 370 LLAGSGLPIVAADDLGDAARKIVA 393
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 478 KSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
K LS+PLVVRLEGTNVQ+GK +L S LP++ A DL +AA +
Sbjct: 347 KEVNLSVPLVVRLEGTNVQQGKDLLAGSGLPIVAADDLGDAARKIV 392
>sp|B3QWF8|SUCC_CHLT3 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroherpeton
thalassium (strain ATCC 35110 / GB-78) GN=sucC PE=3 SV=1
Length = 392
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 232/397 (58%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A +L + V+KAQI AGGRG GV + + + +MIG
Sbjct: 30 EAKKAAETLLTEQGGGVVVVKAQIHAGGRGKA-------GGVKLVRSADEAFEVATQMIG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V +++V + +NI +E Y I DR + V+++S GG +IE VA
Sbjct: 83 TTLVTHQTGPEGKEVRRLLVEEGMNIEKELYLGITLDRATSCNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I I G+ + A++ A FL +G+
Sbjct: 143 ETPEKLLKIQIHPTLGLQPNQAREAAFFLGLEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+F+ +K +A L+N ++ D + EINPLV T E VI++DAKINFDDNA FR
Sbjct: 177 --QFKNAVKFISA-----LYNAYMKADCSLAEINPLVVTKEGRVIALDAKINFDDNALFR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
K+ + SE DP EV+ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG+PAN
Sbjct: 230 HKDYIDLRDTSEEDPLEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGKPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG N +++ + FRII +D NVK ILVN+FGGIV C +A G++ A K+ + +P+
Sbjct: 290 FLDVGGGANPQTVQEGFRIILTDPNVKAILVNIFGGIVRCDRVAGGVIEAAKNIDIHVPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN +++LDES L L+ A L +AA VN
Sbjct: 350 IVRLEGTNADIAQKMLDESGLNLVSAKGLSDAAKKVN 386
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K+ + +P++VRLEGTN +++LDES L L+ A L +AA
Sbjct: 333 AGGVIEAAKNIDIHVPVIVRLEGTNADIAQKMLDESGLNLVSAKGLSDAA 382
>sp|A1BE51|SUCC_CHLPD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium
phaeobacteroides (strain DSM 266) GN=sucC PE=3 SV=1
Length = 392
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 234/397 (58%), Gaps = 40/397 (10%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + ++ N VIKAQI AGGRG GV + +++ I ++M+G
Sbjct: 30 EAKQAAIQLFEEQNSPVVVIKAQIHAGGRGKA-------GGVKLAKSPEEVFDIAQQMLG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V +++V + +NI +E Y I DR + V+++S GG +IE VA
Sbjct: 83 ITLVTHQTGPEGKEVRRLLVEEGMNIDKEFYVGITLDRSTSQNVLMVSTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I ++ G+ A+ A FLE +G+
Sbjct: 143 ETPEKLLKIQVNPLFGLQAFQARQAAFFLELEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+F+ +K + L+N + S+DA EINPLV T E V+++DAKINFD NA FR
Sbjct: 177 --QFKNTVKF-----ITALYNAYTSIDAAIAEINPLVVTKEGRVLALDAKINFDSNALFR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
K+ ++SE DP EV+ASK NLNYV +DGN+GC+VNGAGLAM TMD+I+L GG PAN
Sbjct: 230 HKDFLELRDISEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDMIQLAGGRPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + +++ + F+II SD NVK ILVN+FGGIV C +A G++ A K L +P+
Sbjct: 290 FLDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKVDLHLPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVN 427
+VRLEGTN +++LDES L LI A L +AA V+
Sbjct: 350 IVRLEGTNASIAQKMLDESGLNLIAAKGLHDAAKKVH 386
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 519
A ++ A K L +P++VRLEGTN +++LDES L LI A L +AA
Sbjct: 333 AGGIIEAAKKVDLHLPVIVRLEGTNASIAQKMLDESGLNLIAAKGLHDAA 382
>sp|A4SDL6|SUCC_PROVI Succinyl-CoA ligase [ADP-forming] subunit beta OS=Prosthecochloris
vibrioformis (strain DSM 265) GN=sucC PE=3 SV=1
Length = 391
Score = 293 bits (750), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 233/401 (58%), Gaps = 40/401 (9%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E + A + ++ + V+KAQI AGGRG GV + ++ I +MIG
Sbjct: 30 EAKQAAEQLFEEQSSPVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAYEIASQMIG 82
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT G V +++V + +NI RE Y I DR + V++IS GG +IE VA
Sbjct: 83 TTLVTHQTGPEGKEVRRLLVEEGMNIDREFYVGITLDRATSQNVLMISTEGGMEIEKVAE 142
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+TP + I +D G+ A++ A FL +G+
Sbjct: 143 ETPDRLLKIQVDPLFGLQGFQAREAAFFLGLEGE-------------------------- 176
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+FR A + + L+ + S+DA EINPLV T E V+++DAKINFD NA +R
Sbjct: 177 --QFR-----SAVSFIMSLYKAYTSIDAALAEINPLVVTKEGRVLALDAKINFDSNALYR 229
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
K+ +++E DP EV+ASK NLNYV +DGN+GC+VNGAGLAM TMDII+L GG+PAN
Sbjct: 230 HKDFLELRDITEEDPFEVEASKSNLNYVRLDGNVGCMVNGAGLAMGTMDIIQLAGGKPAN 289
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG + +++ + F+II SD NVK ILVN+FGGIV C +A G++ A K L++P+
Sbjct: 290 FLDVGGGASPQTVEEGFKIILSDKNVKAILVNIFGGIVRCDRVAGGIIEAAKKIGLNLPV 349
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAASLVNACKS 431
+VRLEGTN +++LDES L LI A L +AA V S
Sbjct: 350 IVRLEGTNADIAQKMLDESGLNLIAADGLKDAAQKVTEALS 390
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAAN 520
A ++ A K L++P++VRLEGTN +++LDES L LI A L +AA
Sbjct: 333 AGGIIEAAKKIGLNLPVIVRLEGTNADIAQKMLDESGLNLIAADGLKDAAQ 383
>sp|Q1QQR3|SUCC_NITHX Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitrobacter
hamburgensis (strain X14 / DSM 10229) GN=sucC PE=3 SV=1
Length = 397
Score = 293 bits (749), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/388 (40%), Positives = 231/388 (59%), Gaps = 37/388 (9%)
Query: 48 YVIKAQILAGGRGLGHFDN---GFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F G K GV ++ ++ +M+G L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKEASAGDKGGVRLAKSIDEVKQFASQMLGATLVTVQTGPAGKQ 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + + +I +E Y + DR + ++S GG +IE+VA +P + + +D
Sbjct: 103 VNRLYIEEGSDIDKEFYLSALVDRETSRVAFVVSTEGGVNIEDVAHTSPEKIVSFSVDPA 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+ + +A L +GDL +A V +L+N F++
Sbjct: 163 TGVMSHHGRTVAKALGLRGDLGKQAEKLVAQLYNAFIAK--------------------- 201
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
D LEINPLV T + E+ +DAK++FDDNA +R + + + SE D
Sbjct: 202 ------------DMALLEINPLVVTRQGELRVLDAKVSFDDNALYRHPDAVALRDESEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++AS+++L+YV +DG IGC+VNGAGLAMATMDIIKL+G PANFLDVGGG ++ +
Sbjct: 250 AKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMSPANFLDVGGGATKDKVA 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKQVGLNVPLVVRLEGTNVDAGKK 369
Query: 405 ILDESKLPLIFASDLDEAAS-LVNACKS 431
I+ ES L ++ A DLD+AA +V A K
Sbjct: 370 IIRESGLNVLPADDLDDAAQKIVKAVKG 397
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFILA 525
A +V A K L++PLVVRLEGTNV GK+I+ ES L ++ A DLD+AA + A
Sbjct: 339 AEGVVAAVKQVGLNVPLVVRLEGTNVDAGKKIIRESGLNVLPADDLDDAAQKIVKA 394
>sp|Q4L5U8|SUCC_STAHJ Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=sucC PE=3 SV=1
Length = 388
Score = 292 bits (748), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/394 (42%), Positives = 233/394 (59%), Gaps = 40/394 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A K+L+ + YV+KAQI AGGRG GV ++ ++ +++G +
Sbjct: 28 AEEAVEKAKELDTEIYVVKAQIHAGGRGKA-------GGVKIAKSLSEVETYANELLGKQ 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G V ++ + + +I +E Y V DR + ++ S GGT+IE VAAKT
Sbjct: 81 LVTHQTGPEGKEVKRLYIEQGCDIQKEYYVGFVIDRATDRITLMASEEGGTEIEEVAAKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P + ID G++ A+ IA + + KAA FL SL
Sbjct: 141 PEKIFKETIDPVVGLSPYQARRIAFNINIPKESINKAAK--------FLISL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+N+F+ D + +EINPLV T E EV+++DAKINFDDNA FR K
Sbjct: 185 -----------------YNVFIEKDCSIVEINPLVTTGEGEVLALDAKINFDDNALFRHK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DG+IGC+VNGAGLAMATMD I GG PANFL
Sbjct: 228 DIQELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG +E + +AF+II D NVK I VN+FGGI+ C IA+G+V A K +L++PLVV
Sbjct: 288 DVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAASLV 426
RLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 348 RLEGTNVERGKEILNESGLAIEPAATMAEGAQKI 381
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K +L++PLVVRLEGTNV+ GK IL+ES L + A+ + E A +
Sbjct: 329 AEGIVAAVKEVELTLPLVVRLEGTNVERGKEILNESGLAIEPAATMAEGAQKIV 382
>sp|A7Z4M9|SUCC_BACA2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
amyloliquefaciens (strain FZB42) GN=sucC PE=3 SV=1
Length = 385
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 163/391 (41%), Positives = 229/391 (58%), Gaps = 40/391 (10%)
Query: 33 ARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHK 92
A A + L+ YV+KAQI AGGRG GV ++ E+++G
Sbjct: 28 AEEAVEKAESLSSSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKEYAEELLGKT 80
Query: 93 LITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKT 152
L+T QT G + ++++ + +I +E Y +V DR + V++ S GGT+IE VA KT
Sbjct: 81 LVTHQTGPDGQVIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKT 140
Query: 153 PHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFL 212
P +K ID G+ A++IA + +L KAA F+ L
Sbjct: 141 PEKIKKAVIDPAVGLQGYQAREIAFAINIPKELVGKAAK--------FMLGL-------- 184
Query: 213 EFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQK 272
+ F+ D + EINPLV T + V+++DAK+NFD NA +RQK
Sbjct: 185 -----------------YKAFVEKDCSIAEINPLVVTGDGNVMALDAKLNFDSNALYRQK 227
Query: 273 NIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFL 332
+I ++ E DP+E++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFL
Sbjct: 228 DIMEYRDLDEEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFL 287
Query: 333 DVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVV 392
DVGGG E + +AF+II SD NVK I VN+FGGI+ C IA+G+V A + L++PLVV
Sbjct: 288 DVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATRQVGLTLPLVV 347
Query: 393 RLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
RLEGTNV GK+IL+ES L + A + + A
Sbjct: 348 RLEGTNVDLGKKILNESGLNITSAESMADGA 378
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A + L++PLVVRLEGTNV GK+IL+ES L + A + + A +
Sbjct: 329 AEGVVEATRQVGLTLPLVVRLEGTNVDLGKKILNESGLNITSAESMADGAQKIV 382
>sp|C0R4N4|SUCC_WOLWR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Wolbachia sp.
subsp. Drosophila simulans (strain wRi) GN=sucC PE=3
SV=1
Length = 383
Score = 291 bits (746), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 231/393 (58%), Gaps = 46/393 (11%)
Query: 31 EDARTATNILKDLNFKEYVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIG 90
E+ +T + LK F V+KAQI AGGRG GV + ++ ++ MIG
Sbjct: 29 EEVKTQVSQLKSDVF---VVKAQIHAGGRGKA-------GGVKLAKSAEEAQQFVKDMIG 78
Query: 91 HKLITKQTPKTGINVNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAA 150
L+T QT +G V KV V + +I +E Y +V D + P+ I S GG DIE VA
Sbjct: 79 MTLVTHQTGPSGQQVRKVYVEEGSSIKKEYYLSLVIDPKLSRPIFIFSSEGGMDIEEVAK 138
Query: 151 KTPHLVKTIPIDVHQGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIAD 210
+P K + D+ + ++ + F + +++K+ N+
Sbjct: 139 NSP--AKIVKFDIDSATSFDSSKLSSSF--------HLSPEQIEKITNV----------- 177
Query: 211 FLEFRGDLKAKAATEVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFR 270
+ +++ F++ DA+Q+EINPLVET + I++DAKINFDDNA +R
Sbjct: 178 ---------------AKNIYDAFIATDASQIEINPLVETSSGDFIALDAKINFDDNALYR 222
Query: 271 QKNIFSQNEVSESDPREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPAN 330
I + E E++ASKY L+Y+ MDG+IGC+VNGAGLAMATMDIIK +G EPAN
Sbjct: 223 HPEIMELRDYDEEVKEEIEASKYGLSYIKMDGSIGCMVNGAGLAMATMDIIKYYGAEPAN 282
Query: 331 FLDVGGGVNEESIIQAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPL 390
FLDVGGG ++E++ +AF+II SDSNVK ILVN+FGGI+ C IA G+V A K + +PL
Sbjct: 283 FLDVGGGASKETVTEAFKIILSDSNVKGILVNIFGGIMRCDIIASGIVAAAKEMSIKVPL 342
Query: 391 VVRLEGTNVQEGKRILDESKLPLIFASDLDEAA 423
VVRL GTN +EGK+IL+ES L +I A +L +AA
Sbjct: 343 VVRLSGTNFEEGKKILEESGLNIIAADELGDAA 375
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A+ +V A K + +PLVVRL GTN +EGK+IL+ES L +I A +L +AA +
Sbjct: 326 ASGIVAAAKEMSIKVPLVVRLSGTNFEEGKKILEESGLNIIAADELGDAAQKIV 379
>sp|Q65JP0|SUCC_BACLD Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus
licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3
SV=1
Length = 386
Score = 291 bits (746), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 224/376 (59%), Gaps = 40/376 (10%)
Query: 48 YVIKAQILAGGRGLGHFDNGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGINVNK 107
YV+KAQI AGGRG GV + +++ E+++G L+T QT G + +
Sbjct: 43 YVVKAQIHAGGRGKA-------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKR 95
Query: 108 VMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVHQGI 167
+++ + +I +E Y +V DR + V++ S GGT+IE VA KTP + ID G+
Sbjct: 96 LLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGL 155
Query: 168 TESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAATEVQ 227
S A+KIA + +L +A +
Sbjct: 156 Q---------------------------------SYQARKIAFAINIPKELVGQAVKFMM 182
Query: 228 KLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESDPRE 287
L+ F D + EINPLV T + +V+++DAK+NFD NA +RQK+I ++ E DP+E
Sbjct: 183 GLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKDILEYRDLDEEDPKE 242
Query: 288 VDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESIIQAF 347
++ASKY+L+Y+ +DGNIGC+VNGAGLAM+TMDIIK +GGEPANFLDVGGG E + +AF
Sbjct: 243 IEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGEPANFLDVGGGATAEKVTEAF 302
Query: 348 RIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKRILD 407
+II SD NVK I VN+FGGI+ C IA+G+V A K L++PLVVRLEGTNV GK+ILD
Sbjct: 303 KIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLEGTNVDLGKKILD 362
Query: 408 ESKLPLIFASDLDEAA 423
+S L + A + + A
Sbjct: 363 DSGLNITSAESMADGA 378
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLIFASDLDEAANWFI 523
A +V A K L++PLVVRLEGTNV GK+ILD+S L + A + + A +
Sbjct: 329 AEGVVEATKQVGLTLPLVVRLEGTNVDLGKKILDDSGLNITSAESMADGAQKIV 382
>sp|Q0AKU3|SUCC_MARMM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Maricaulis maris
(strain MCS10) GN=sucC PE=3 SV=1
Length = 399
Score = 291 bits (745), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 159/370 (42%), Positives = 223/370 (60%), Gaps = 36/370 (9%)
Query: 48 YVIKAQILAGGRGLGHFD---NGFKSGVHFTNNVQDIPPILEKMIGHKLITKQTPKTGIN 104
+V+K+QI AGGRG G F + K GV + +D+ ++M+G+ L+T QT G
Sbjct: 43 WVVKSQIHAGGRGKGKFKELGSDAKGGVRLAFSKEDVVKNAKEMLGNTLVTHQTGPEGKR 102
Query: 105 VNKVMVAKSVNITRETYFCIVQDRLHNGPVVIISPSGGTDIENVAAKTPHLVKTIPIDVH 164
VN++ + +I E Y ++ +R ++S GG DIE VAA+TP ++TI ID
Sbjct: 103 VNRLYIEDGADIATELYCSLLVNRETGQVAFVVSTEGGMDIEEVAAETPEKIQTIDIDPS 162
Query: 165 QGITESLAQDIADFLEFQGDLKAKAATEVQKLWNLFLSSLAQKIADFLEFRGDLKAKAAT 224
G+T++ A + D L+ +G + R D+ A
Sbjct: 163 TGVTDASAAAVCDALKLEG-----------------------------QAREDMMGLA-- 191
Query: 225 EVQKLWNLFLSVDATQLEINPLVETDEREVISVDAKINFDDNAEFRQKNIFSQNEVSESD 284
+ L+ F D + LEINPL+ D V +DAK++FD NA FR +I + +E D
Sbjct: 192 --KILYTAFCEKDMSMLEINPLIVMDNGHVRVLDAKVSFDGNALFRHPDIMELRDTTEED 249
Query: 285 PREVDASKYNLNYVGMDGNIGCLVNGAGLAMATMDIIKLHGGEPANFLDVGGGVNEESII 344
+E++ASKY+L YV +DG+IGC+VNGAGLAMATMDIIKL+G EPANFLDVGGG E +
Sbjct: 250 EKEIEASKYDLAYVALDGDIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGATTEKVT 309
Query: 345 QAFRIISSDSNVKCILVNVFGGIVNCATIAKGLVNACKSFKLSIPLVVRLEGTNVQEGKR 404
AF+II++D NVK ILVN+FGGI+ C IA+G+V A K L +PLVVRLEGTNV +GK+
Sbjct: 310 AAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVTAVKDVGLQVPLVVRLEGTNVAKGKQ 369
Query: 405 ILDESKLPLI 414
I++ES L +I
Sbjct: 370 IINESGLNVI 379
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 470 AASLVNACKSFKLSIPLVVRLEGTNVQEGKRILDESKLPLI 510
A +V A K L +PLVVRLEGTNV +GK+I++ES L +I
Sbjct: 339 AEGVVTAVKDVGLQVPLVVRLEGTNVAKGKQIINESGLNVI 379
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,769,357
Number of Sequences: 539616
Number of extensions: 7828134
Number of successful extensions: 25089
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 22230
Number of HSP's gapped (non-prelim): 2171
length of query: 525
length of database: 191,569,459
effective HSP length: 122
effective length of query: 403
effective length of database: 125,736,307
effective search space: 50671731721
effective search space used: 50671731721
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)