BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7786
(252 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157130314|ref|XP_001661885.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108871945|gb|EAT36170.1| AAEL011744-PA [Aedes aegypti]
Length = 619
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/156 (69%), Positives = 129/156 (82%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSW+ PR ILS D H+ +R +RILV+G++VPP CSFR MK P++
Sbjct: 131 LAKGIQYEDPIKTSWKPPRYILSRTDASHERVREKMRILVDGENVPPPICSFREMKFPKA 190
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ ALE + I+KP+PIQVQGIPA LSGRD+IGIAFTGSGKTLVFVLPI+MF LEQE +LP
Sbjct: 191 ILAALEKRNIRKPSPIQVQGIPAVLSGRDLIGIAFTGSGKTLVFVLPIVMFSLEQELRLP 250
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIG 250
F+ EGPYGLIICPSRELA+QTHDIIQYYC L +
Sbjct: 251 FISKEGPYGLIICPSRELAKQTHDIIQYYCQHLQMS 286
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 80/97 (82%), Gaps = 4/97 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLPI+MF LEQE +LPF+ EGPYGLIICPSRELA+QTHDI
Sbjct: 216 SGRDLIGIAFTGSGKTLVFVLPIVMFSLEQELRLPFISKEGPYGLIICPSRELAKQTHDI 275
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKG 98
IQYYC L + +R+ LAIGGVP+N +L I++G
Sbjct: 276 IQYYCQHLQMSGMPEIRSALAIGGVPVNDALATIQQG 312
>gi|270014204|gb|EFA10652.1| hypothetical protein TcasGA2_TC016289 [Tribolium castaneum]
Length = 619
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/151 (70%), Positives = 127/151 (84%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KGIQY+DPIKTSWR PR +L++P+ H+ IR LRILVEG+D+PP +FR MKL E ++
Sbjct: 131 KGIQYSDPIKTSWRPPRYVLAMPENRHEKIRNELRILVEGEDIPPPLKTFREMKLHEGII 190
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
L+ K IKKPTPIQ+QGIP LSGRD+IGIAFTGSGKTLVFVLP++MFCLEQE KLPF+
Sbjct: 191 SGLKEKKIKKPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFVLPLIMFCLEQEVKLPFI 250
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGPYGLIICPSRELA+QT DIIQ++C +L
Sbjct: 251 KNEGPYGLIICPSRELAKQTFDIIQHFCNSL 281
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 85/102 (83%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVFVLP++MFCLEQE KLPF+ EGPYGLIICPSRELA+QT
Sbjct: 211 TVLSGRDMIGIAFTGSGKTLVFVLPLIMFCLEQEVKLPFIKNEGPYGLIICPSRELAKQT 270
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
DIIQ++C +L +RT LAIGGVP+++++DVI++G+
Sbjct: 271 FDIIQHFCNSLRKHGMPEIRTSLAIGGVPVSEAVDVIQRGVH 312
>gi|158298027|ref|XP_318117.4| AGAP004711-PA [Anopheles gambiae str. PEST]
gi|157014611|gb|EAA13218.5| AGAP004711-PA [Anopheles gambiae str. PEST]
Length = 613
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 127/153 (83%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSW PR ILS P+ H+ IR LRIL EG++VPP +FR MKLP++
Sbjct: 125 LAKGIQYEDPIKTSWTPPRYILSKPESRHEKIREKLRILTEGENVPPPLRTFREMKLPKA 184
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ AL + IKKP+PIQVQGIPA L+GRD+IGIAFTGSGKTLVFVLPI+MFCLEQE +LP
Sbjct: 185 VLAALAKRNIKKPSPIQVQGIPAVLAGRDLIGIAFTGSGKTLVFVLPIIMFCLEQELRLP 244
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QTHDIIQYYC L
Sbjct: 245 FIKREGPYGLIICPSRELAKQTHDIIQYYCRHL 277
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 82/96 (85%), Gaps = 6/96 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLPI+MFCLEQE +LPF+ EGPYGLIICPSRELA+QTHDIIQ
Sbjct: 212 RDLIGIAFTGSGKTLVFVLPIIMFCLEQELRLPFIKREGPYGLIICPSRELAKQTHDIIQ 271
Query: 68 YYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKG 98
YYC A +P +RT LAIGGVP+N ++ +I++G
Sbjct: 272 YYCRHLQEAGMP-EIRTVLAIGGVPVNDAIAIIQQG 306
>gi|193683780|ref|XP_001952119.1| PREDICTED: ATP-dependent RNA helicase abstrakt-like [Acyrthosiphon
pisum]
Length = 615
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/156 (67%), Positives = 127/156 (81%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KGIQY+DPIKTSW APR IL++P++ H+ +R LRILVEG+++PP SF+ MKL + ++
Sbjct: 127 KGIQYDDPIKTSWTAPRYILAMPEERHENVRLKLRILVEGEEIPPPLKSFKEMKLNKGIM 186
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
L KGIKKPTPIQ+QGIP LSGRD+IGIAFTGSGKTLVFVLP+LMFCLEQE KLPF
Sbjct: 187 AGLSQKGIKKPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFVLPLLMFCLEQEIKLPFK 246
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
P EGPYGLIICPSRELA+QT DII +Y L ++
Sbjct: 247 PNEGPYGLIICPSRELAKQTFDIINHYMTFLERSNY 282
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 82/102 (80%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVFVLP+LMFCLEQE KLPF P EGPYGLIICPSRELA+QT
Sbjct: 207 TVLSGRDMIGIAFTGSGKTLVFVLPLLMFCLEQEIKLPFKPNEGPYGLIICPSRELAKQT 266
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
DII +Y L LR+CLAIGG+P+ +SLDVIK+G+
Sbjct: 267 FDIINHYMTFLERSNYPRLRSCLAIGGIPVFESLDVIKRGVH 308
>gi|170059153|ref|XP_001865238.1| ATP-dependent RNA helicase abstrakt [Culex quinquefasciatus]
gi|167878066|gb|EDS41449.1| ATP-dependent RNA helicase abstrakt [Culex quinquefasciatus]
Length = 619
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/153 (67%), Positives = 126/153 (82%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSW+ PR IL+ D H+ +R +RILV+G++VPP C+FR MK P+S
Sbjct: 131 LAKGIQYEDPIKTSWKPPRYILARADVSHEKVRERMRILVDGENVPPPICTFREMKFPKS 190
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE + I+KP+PIQVQGIPA L+GRD+IGIAFTGSGKTLVFVLPI+MF LEQE +LP
Sbjct: 191 ILAGLEKRNIRKPSPIQVQGIPAVLAGRDLIGIAFTGSGKTLVFVLPIVMFSLEQEIRLP 250
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT DI+QYYC L
Sbjct: 251 FMAKEGPYGLIICPSRELAKQTFDIVQYYCQHL 283
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 81/96 (84%), Gaps = 6/96 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLPI+MF LEQE +LPF+ EGPYGLIICPSRELA+QT DI+Q
Sbjct: 218 RDLIGIAFTGSGKTLVFVLPIVMFSLEQEIRLPFMAKEGPYGLIICPSRELAKQTFDIVQ 277
Query: 68 YYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKG 98
YYC A +P +R+ LAIGGVP+N++L VI++G
Sbjct: 278 YYCQHLQQAGMP-EIRSALAIGGVPVNEALAVIQQG 312
>gi|357623365|gb|EHJ74551.1| putative ATP-dependent RNA helicase abstrakt [Danaus plexippus]
Length = 613
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/158 (66%), Positives = 128/158 (81%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY++PIKTSW+ P CI SLP + H+ +RR LRI VEG++VPP +FR MK P+
Sbjct: 126 LAKGIQYSEPIKTSWKPPGCISSLPPERHERVRRELRIQVEGENVPPPIRTFRHMKFPKG 185
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++ LEAKGIKKPTPIQVQGIPA LSGRD+IGIAFTGSGKTLVF LPI+M CLEQE ++P
Sbjct: 186 ILQGLEAKGIKKPTPIQVQGIPAVLSGRDMIGIAFTGSGKTLVFTLPIIMMCLEQEIEMP 245
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F+ EGPYGLIICPSRELA+QTHDII ++ L +
Sbjct: 246 FIRNEGPYGLIICPSRELAKQTHDIIMHFVKHLKMAGH 283
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 80/99 (80%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LPI+M CLEQE ++PF+ EGPYGLIICPSRELA+QTHDI
Sbjct: 211 SGRDMIGIAFTGSGKTLVFTLPIIMMCLEQEIEMPFIRNEGPYGLIICPSRELAKQTHDI 270
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I ++ L + +R+CLAIGGV +++ ++V+++G+
Sbjct: 271 IMHFVKHLKMAGHPEIRSCLAIGGVSVSECMEVVQRGVH 309
>gi|383858565|ref|XP_003704771.1| PREDICTED: ATP-dependent RNA helicase abstrakt-like [Megachile
rotundata]
Length = 625
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/153 (68%), Positives = 124/153 (81%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSWR PR +L+L + H+ +RR LRILVEGDD+PP SF+ MK
Sbjct: 135 LAKGIQYEDPIKTSWRPPRAVLALGEARHERVRRKLRILVEGDDIPPPLKSFKEMKFHRG 194
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQVQGIP LSGRD+IGIAFTGSGKTLVFVLPI+MFCLEQE +P
Sbjct: 195 ILNGLEQKGIIKPTPIQVQGIPTVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMP 254
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT+DII++Y +L
Sbjct: 255 FVRNEGPYGLIICPSRELAKQTYDIIRHYTNSL 287
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 84/102 (82%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVFVLPI+MFCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 217 TVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMPFVRNEGPYGLIICPSRELAKQT 276
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII++Y +L +R+CLAIGGVP+++SL+VI KG+
Sbjct: 277 YDIIRHYTNSLRQAGCPEIRSCLAIGGVPVSESLEVINKGVH 318
>gi|47222980|emb|CAF99136.1| unnamed protein product [Tetraodon nigroviridis]
Length = 509
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/157 (66%), Positives = 127/157 (80%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW+APR IL++PD H+ +R+ ILV+GD++PP SFR MK
Sbjct: 47 SVKEMAKGIIYDDPIKTSWKAPRYILNMPDTRHERVRKKFHILVDGDNIPPPIKSFREMK 106
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LP ++++ L+ KGI PTPIQ+QG+P LSGRD+IGIAFTGSGKTLVF LPI+MFCLEQE
Sbjct: 107 LPPAILKGLKKKGIVHPTPIQIQGMPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQE 166
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH II+YYC L
Sbjct: 167 KRLPFCKREGPYGLIICPSRELARQTHGIIEYYCKLL 203
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 78/104 (75%), Gaps = 4/104 (3%)
Query: 1 MVTYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 60
M T + RD+IGIAFTGSGKTLVF LPI+MFCLEQE +LPF EGPYGLIICPSRELAR
Sbjct: 131 MPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSRELAR 190
Query: 61 QTHDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
QTH II+YYC L LRT L IGG+ + + ++VIK G+
Sbjct: 191 QTHGIIEYYCKLLEEEGAPQLRTALCIGGMSVKEQMEVIKHGVH 234
>gi|340725455|ref|XP_003401085.1| PREDICTED: ATP-dependent RNA helicase abstrakt-like [Bombus
terrestris]
Length = 625
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 122/153 (79%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSWR PR +L+ + H+ IRR LRILVEGDDVPP SF+ MK
Sbjct: 135 LAKGIQYEDPIKTSWRPPRAVLAAGEARHERIRRKLRILVEGDDVPPPLKSFKEMKFHRG 194
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQVQGIP LSGRD+IGIAFTGSGKTLVFVLPI+MFCLEQE +P
Sbjct: 195 ILNGLEQKGIVKPTPIQVQGIPTVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMP 254
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT+DII++Y L
Sbjct: 255 FVRNEGPYGLIICPSRELAKQTYDIIRHYTNTL 287
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 83/102 (81%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVFVLPI+MFCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 217 TVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMPFVRNEGPYGLIICPSRELAKQT 276
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII++Y L +R+CLAIGGVP+++SL+VI KG+
Sbjct: 277 YDIIRHYTNTLRQAGCPEIRSCLAIGGVPVSESLEVINKGVH 318
>gi|350415294|ref|XP_003490595.1| PREDICTED: ATP-dependent RNA helicase abstrakt-like [Bombus
impatiens]
Length = 625
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 122/153 (79%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSWR PR +L+ + H+ IRR LRILVEGDDVPP SF+ MK
Sbjct: 135 LAKGIQYEDPIKTSWRPPRAVLAAGEARHERIRRKLRILVEGDDVPPPLKSFKEMKFHRG 194
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQVQGIP LSGRD+IGIAFTGSGKTLVFVLPI+MFCLEQE +P
Sbjct: 195 ILNGLEQKGIVKPTPIQVQGIPTVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMP 254
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT+DII++Y L
Sbjct: 255 FVRNEGPYGLIICPSRELAKQTYDIIRHYTNTL 287
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 83/102 (81%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVFVLPI+MFCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 217 TVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMPFVRNEGPYGLIICPSRELAKQT 276
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII++Y L +R+CLAIGGVP+++SL+VI KG+
Sbjct: 277 YDIIRHYTNTLRQAGCPEIRSCLAIGGVPVSESLEVINKGVH 318
>gi|326928431|ref|XP_003210383.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like
[Meleagris gallopavo]
Length = 604
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/162 (64%), Positives = 127/162 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSWRAPR IL++ + HD +R+ ILVEG+ +PP SF+ MK
Sbjct: 110 SVKEMAKGITYDDPIKTSWRAPRYILAMSEARHDRVRKKYHILVEGEGIPPPIKSFKEMK 169
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI++PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 170 FPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 229
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+LPF EGPYGLIICPSRELARQTH II+YYC L S
Sbjct: 230 KRLPFSKREGPYGLIICPSRELARQTHGIIEYYCRLLQEDSL 271
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 6/103 (5%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 196 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 255
Query: 63 HDIIQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
H II+YYC +LP PLR L IGG+ + + ++ IK G+
Sbjct: 256 HGIIEYYCRLLQEDSLP-PLRCALCIGGMSVKEQMETIKHGVH 297
>gi|410914046|ref|XP_003970499.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Takifugu
rubripes]
Length = 614
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 127/157 (80%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW+APR IL++PD H+ +R+ ILV+GD++P SFR MK
Sbjct: 120 SVKEMAKGIIYDDPIKTSWKAPRYILNMPDTRHERVRKKFHILVDGDNIPAPIKSFREMK 179
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LP ++++ L+ KGI PTPIQ+QG+P LSGRD+IGIAFTGSGKTLVF+LPI+MFCLEQE
Sbjct: 180 LPPAILKGLKKKGIVHPTPIQIQGMPTVLSGRDMIGIAFTGSGKTLVFILPIIMFCLEQE 239
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH II+YYC L
Sbjct: 240 KRLPFCKREGPYGLIICPSRELARQTHGIIEYYCKLL 276
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Query: 1 MVTYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 60
M T + RD+IGIAFTGSGKTLVF+LPI+MFCLEQE +LPF EGPYGLIICPSRELAR
Sbjct: 204 MPTVLSGRDMIGIAFTGSGKTLVFILPIIMFCLEQEKRLPFCKREGPYGLIICPSRELAR 263
Query: 61 QTHDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
QTH II+YYC L LRT L IGG+ + + ++VIK G+
Sbjct: 264 QTHGIIEYYCKLLEEEGAPQLRTALCIGGMSVKEQMEVIKHGVH 307
>gi|380024659|ref|XP_003696110.1| PREDICTED: ATP-dependent RNA helicase abstrakt-like [Apis florea]
Length = 621
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 123/153 (80%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY +PIKTSWR PR +L+ + H+ IRR LRILVEGDDVPP SF+ MK
Sbjct: 131 LAKGIQYEEPIKTSWRPPRAVLAAGEARHERIRRKLRILVEGDDVPPPLKSFKEMKFHRG 190
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQ+QGIP LSGRD+IGIAFTGSGKTLVFVLPI+MFCLEQE +P
Sbjct: 191 ILNGLEQKGIVKPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMP 250
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT+DII++Y +L
Sbjct: 251 FVRNEGPYGLIICPSRELAKQTYDIIRHYTNSL 283
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 84/102 (82%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVFVLPI+MFCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 213 TVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMPFVRNEGPYGLIICPSRELAKQT 272
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII++Y +L +R+CLAIGGVP+++SL+VI KG+
Sbjct: 273 YDIIRHYTNSLRQAGCPEIRSCLAIGGVPVSESLEVINKGVH 314
>gi|327265659|ref|XP_003217625.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Anolis
carolinensis]
Length = 672
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 126/157 (80%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSWRAPR +L++ + HD +R+ ILVEG+ +PP SF+ MK
Sbjct: 178 SVKEMAKGITYDDPIKTSWRAPRYVLAMSEARHDRVRKKYHILVEGEAIPPPLKSFKEMK 237
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI++PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 238 FPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 297
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 298 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 334
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQTH I
Sbjct: 267 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGI 326
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
++YYC L LR L IGG+ + + ++ IK G+
Sbjct: 327 LEYYCRLLHEDGMPSLRCALCIGGMSVKEQMETIKHGVH 365
>gi|224067501|ref|XP_002193843.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Taeniopygia
guttata]
Length = 617
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 125/157 (79%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSWRAPR IL + + HD +R+ ILVEG+ +PP SF+ MK
Sbjct: 123 SVKEMAKGITYDDPIKTSWRAPRYILGMSEARHDRVRKKYHILVEGEGIPPPIKSFKEMK 182
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI++PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 183 FPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 242
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 243 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 279
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 209 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 268
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L PLR L IGG+ + + ++ IK G+
Sbjct: 269 HGILEYYCRLLQEDGLPPLRCALCIGGMSVKEQMETIKHGVH 310
>gi|444706640|gb|ELW47966.1| putative ATP-dependent RNA helicase DDX41 [Tupaia chinensis]
Length = 587
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 126/161 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +RR RILVEGD +PP SF+ MK
Sbjct: 93 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRRKHRILVEGDAIPPPIKSFKEMK 152
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI +PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 153 FPAAILRGLKKKGIHQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 212
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
+LPF EGPYGLIICPSRELARQTH I++YYC L S
Sbjct: 213 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 253
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 179 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 238
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 239 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 280
>gi|363746590|ref|XP_003643723.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like, partial
[Gallus gallus]
Length = 497
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 103/162 (63%), Positives = 127/162 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSWRAPR IL++ + H+ +R+ ILVEG+ +PP SF+ MK
Sbjct: 3 SVKEMAKGITYDDPIKTSWRAPRYILAMSEARHNRVRKKYHILVEGEGIPPPIKSFKEMK 62
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI++PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 63 FPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 122
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+LPF EGPYGLIICPSRELARQTH II+YYC L S
Sbjct: 123 KRLPFSKREGPYGLIICPSRELARQTHGIIEYYCRLLQEDSL 164
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 6/103 (5%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 89 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 148
Query: 63 HDIIQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
H II+YYC +LP PLR L IGG+ + + ++ IK G+
Sbjct: 149 HGIIEYYCRLLQEDSLP-PLRCALCIGGMSVKEQMETIKHGVH 190
>gi|328783258|ref|XP_392069.4| PREDICTED: ATP-dependent RNA helicase abstrakt isoform 1 [Apis
mellifera]
Length = 621
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 122/153 (79%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY +PIKTSWR PR L+ + H+ IRR LRILVEGDDVPP SF+ MK
Sbjct: 131 LAKGIQYEEPIKTSWRPPRAALTAGEARHERIRRKLRILVEGDDVPPPLKSFKEMKFHRG 190
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQ+QGIP LSGRD+IGIAFTGSGKTLVFVLPI+MFCLEQE +P
Sbjct: 191 ILNGLEQKGIVKPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMP 250
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT+DII++Y +L
Sbjct: 251 FVRNEGPYGLIICPSRELAKQTYDIIRHYTNSL 283
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 84/102 (82%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVFVLPI+MFCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 213 TVLSGRDMIGIAFTGSGKTLVFVLPIIMFCLEQEVAMPFVRNEGPYGLIICPSRELAKQT 272
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII++Y +L +R+CLAIGGVP+++SL+VI KG+
Sbjct: 273 YDIIRHYTNSLRQAGCPEIRSCLAIGGVPVSESLEVINKGVH 314
>gi|395505230|ref|XP_003756946.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Sarcophilus
harrisii]
Length = 624
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 124/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW+APR +LS+ + HD +R+ ILVEG+ +PP SF+ MK
Sbjct: 130 SVKEMAKGITYDDPIKTSWKAPRYVLSMSEARHDRVRKKYHILVEGEGIPPPLKSFKEMK 189
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 190 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 249
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 250 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 286
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 216 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 275
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L PLR L IGG+ + + ++ I+ G+
Sbjct: 276 HGILEYYCRLLQEDSSPPLRCALCIGGMSVKEQMETIRHGVH 317
>gi|334311247|ref|XP_001381058.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Monodelphis
domestica]
Length = 617
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 125/161 (77%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW+APR +LS+ + HD +R+ ILVEG+ +PP SF+ MK
Sbjct: 123 SVKEMAKGITYDDPIKTSWKAPRYVLSMSEARHDRVRKKYHILVEGEGIPPPLKSFKEMK 182
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 183 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 242
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
+LPF EGPYGLIICPSRELARQTH I++YYC L S
Sbjct: 243 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 283
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 209 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 268
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L PLR L IGG+ + + ++ I+ G+
Sbjct: 269 HGILEYYCRLLQEDSSPPLRCALCIGGMSVKEQMETIRHGVH 310
>gi|449267073|gb|EMC78039.1| putative ATP-dependent RNA helicase DDX41, partial [Columba livia]
Length = 605
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 125/157 (79%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW APR IL++ + HD +R+ ILVEG+ +PP SF+ MK
Sbjct: 122 SVKEMAKGITYDDPIKTSWTAPRYILAMSEARHDRVRKKYHILVEGEGIPPPIKSFKEMK 181
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI++PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFC+EQE
Sbjct: 182 FPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCMEQE 241
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH II+YYC L
Sbjct: 242 KRLPFSKREGPYGLIICPSRELARQTHGIIEYYCRLL 278
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFC+EQE +LPF EGPYGLIICPSRELARQT
Sbjct: 208 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCMEQEKRLPFSKREGPYGLIICPSRELARQT 267
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
H II+YYC L PLR L IGG+ + + ++ IK G+
Sbjct: 268 HGIIEYYCRLLQEDGLPPLRCALCIGGMSVKEQMETIKHGVH 309
>gi|348516780|ref|XP_003445915.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like
[Oreochromis niloticus]
Length = 614
Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW+APR IL++PD H+ +R+ ILV+GD +P SFR MK
Sbjct: 120 SVKEMAKGIIYDDPIKTSWKAPRYILNMPDTRHERVRKKFHILVDGDGIPAPIKSFREMK 179
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P ++++ L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LPI+MF LEQE
Sbjct: 180 FPPAILKGLKKKGIVHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQE 239
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH II+YYC L
Sbjct: 240 KRLPFFKREGPYGLIICPSRELARQTHGIIEYYCKLL 276
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LPI+MF LEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 206 TVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQEKRLPFFKREGPYGLIICPSRELARQT 265
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H II+YYC L LRT L IGG+ + + ++V+K G+
Sbjct: 266 HGIIEYYCKLLEEEGAPQLRTALCIGGMSVKEQMEVVKHGVH 307
>gi|432879043|ref|XP_004073424.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Oryzias
latipes]
Length = 614
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW+APR IL++P+ H+ +R+ ILV+GD +P SFR MK
Sbjct: 120 SVKEMAKGIIYDDPIKTSWKAPRYILNMPETRHERVRKKFHILVDGDGIPAPIKSFREMK 179
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P ++++ L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LPI+MF LEQE
Sbjct: 180 FPPAILKGLKKKGIVHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQE 239
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH II+YYC L
Sbjct: 240 KRLPFFKREGPYGLIICPSRELARQTHSIIEYYCKLL 276
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LPI+MF LEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 206 TVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQEKRLPFFKREGPYGLIICPSRELARQT 265
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H II+YYC L LRT L IGG+ + + ++V+K G+
Sbjct: 266 HSIIEYYCKLLEEEGAPQLRTALCIGGMSVKEQMEVVKHGVH 307
>gi|426229383|ref|XP_004008770.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Ovis aries]
Length = 622
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/161 (62%), Positives = 124/161 (77%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
+LPF EGPYGLIICPSRELARQTH I++YYC L S
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDS 288
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|417515860|gb|JAA53735.1| putative ATP-dependent RNA helicase DDX41 [Sus scrofa]
Length = 622
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|129277522|ref|NP_001076071.1| probable ATP-dependent RNA helicase DDX41 [Bos taurus]
gi|126717403|gb|AAI33466.1| DDX41 protein [Bos taurus]
gi|296485512|tpg|DAA27627.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Bos taurus]
Length = 622
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|417411966|gb|JAA52400.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 620
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 126 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 185
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 186 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 245
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 246 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 282
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 212 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 271
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 272 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 313
>gi|281342094|gb|EFB17678.1| hypothetical protein PANDA_018093 [Ailuropoda melanoleuca]
Length = 613
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 119 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 178
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 179 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 238
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 239 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 275
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 205 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 264
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 265 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 306
>gi|432104108|gb|ELK30938.1| Putative ATP-dependent RNA helicase DDX41 [Myotis davidii]
Length = 657
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR ILS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 163 SVKEMAKGITYDDPIKTSWTPPRYILSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 222
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 223 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 282
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 283 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 319
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 249 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 308
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 309 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 350
>gi|355750468|gb|EHH54806.1| hypothetical protein EGM_15715 [Macaca fascicularis]
Length = 622
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|355683291|gb|AER97077.1| DEAD box polypeptide 41 [Mustela putorius furo]
Length = 621
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|296193469|ref|XP_002744529.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Callithrix
jacchus]
Length = 622
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|157820683|ref|NP_001101516.1| probable ATP-dependent RNA helicase DDX41 [Rattus norvegicus]
gi|149039854|gb|EDL93970.1| rCG24134 [Rattus norvegicus]
gi|187469705|gb|AAI66825.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Rattus norvegicus]
Length = 622
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 124/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LP +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 LPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|410949088|ref|XP_003981256.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Felis catus]
Length = 622
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|403290044|ref|XP_003936143.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Saimiri
boliviensis boliviensis]
Length = 622
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|149726038|ref|XP_001502240.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Equus
caballus]
Length = 622
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|73953218|ref|XP_536417.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 isoform 1
[Canis lupus familiaris]
Length = 622
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|395861175|ref|XP_003802869.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Otolemur
garnettii]
Length = 622
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|301785524|ref|XP_002928176.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like
[Ailuropoda melanoleuca]
Length = 622
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|21071032|ref|NP_057306.2| probable ATP-dependent RNA helicase DDX41 [Homo sapiens]
gi|55625482|ref|XP_518135.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 isoform 3 [Pan
troglodytes]
gi|397470614|ref|XP_003806913.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Pan paniscus]
gi|426351200|ref|XP_004043145.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Gorilla
gorilla gorilla]
gi|20532370|sp|Q9UJV9.2|DDX41_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX41; AltName:
Full=DEAD box protein 41; AltName: Full=DEAD box protein
abstrakt homolog
gi|15930065|gb|AAH15476.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Homo sapiens]
gi|119605387|gb|EAW84981.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_d [Homo
sapiens]
gi|189067937|dbj|BAG37875.1| unnamed protein product [Homo sapiens]
gi|306921323|dbj|BAJ17741.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [synthetic construct]
gi|325463517|gb|ADZ15529.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [synthetic construct]
gi|410219864|gb|JAA07151.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
gi|410264084|gb|JAA20008.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
gi|410289890|gb|JAA23545.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
Length = 622
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|62896755|dbj|BAD96318.1| DEAD-box protein abstrakt variant [Homo sapiens]
Length = 622
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|440898373|gb|ELR49887.1| Putative ATP-dependent RNA helicase DDX41, partial [Bos grunniens
mutus]
Length = 614
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 120 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 179
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 180 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 239
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 240 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 276
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 206 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 265
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 266 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 307
>gi|392341227|ref|XP_003754285.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Rattus
norvegicus]
Length = 796
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 124/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 302 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 361
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LP +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 362 LPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 421
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 422 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 458
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 388 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 447
Query: 63 HDIIQYYCAAL---PIPLRTC-LAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L PL C L IGGV + + ++ ++ G+
Sbjct: 448 HGILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETMRHGVH 489
>gi|380798911|gb|AFE71331.1| putative ATP-dependent RNA helicase DDX41, partial [Macaca mulatta]
Length = 606
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 112 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 171
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 172 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 231
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 232 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 268
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 198 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 257
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 258 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 299
>gi|301615062|ref|XP_002936986.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Xenopus
(Silurana) tropicalis]
Length = 614
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/162 (62%), Positives = 122/162 (75%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW+ PR IL + + HD +R ILVEG+ +P SF+ MK
Sbjct: 120 SVKEMAKGITYDDPIKTSWKPPRHILEMSEARHDRVRSKYHILVEGERIPQPIKSFKEMK 179
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 180 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 239
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+LPF EGPYGLIICPSRELARQTH II+YYC L +F
Sbjct: 240 KRLPFAKREGPYGLIICPSRELARQTHSIIEYYCHLLQEDNF 281
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 76/99 (76%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQTH I
Sbjct: 209 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFAKREGPYGLIICPSRELARQTHSI 268
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
I+YYC L LRT L IGG+ + + ++ IK+G+
Sbjct: 269 IEYYCHLLQEDNFPHLRTALCIGGMSVKEQMETIKQGVH 307
>gi|7022398|dbj|BAA91585.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPATILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|343961729|dbj|BAK62454.1| probable ATP-dependent RNA helicase DDX41 [Pan troglodytes]
Length = 622
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|109079956|ref|XP_001092587.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 isoform 3
[Macaca mulatta]
Length = 622
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|344265764|ref|XP_003404952.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX41-like, partial [Loxodonta africana]
Length = 613
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMXKGITYDDPIKTSWMPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|30584005|gb|AAP36251.1| Homo sapiens DEAD-box protein abstrakt [synthetic construct]
gi|61369941|gb|AAX43416.1| DEAD box polypeptide 41 [synthetic construct]
gi|61369946|gb|AAX43417.1| DEAD box polypeptide 41 [synthetic construct]
Length = 623
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|332263067|ref|XP_003280577.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Nomascus
leucogenys]
Length = 578
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|402873575|ref|XP_003900647.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Papio anubis]
gi|355691902|gb|EHH27087.1| hypothetical protein EGK_17201 [Macaca mulatta]
gi|387542592|gb|AFJ71923.1| putative ATP-dependent RNA helicase DDX41 [Macaca mulatta]
Length = 622
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|6118555|gb|AAF04150.1|AF195417_1 DEAD-box protein abstrakt [Homo sapiens]
Length = 621
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 127 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 186
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 187 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 246
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 247 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 283
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 213 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 272
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 273 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 314
>gi|119605383|gb|EAW84977.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_a [Homo
sapiens]
gi|119605386|gb|EAW84980.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_a [Homo
sapiens]
gi|193787208|dbj|BAG52414.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 2 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 61
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 62 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 121
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 122 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 158
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 88 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 147
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 148 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 189
>gi|392348989|ref|XP_003750258.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Rattus
norvegicus]
Length = 360
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 124/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 159 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEEQHERVRKKYHILVEGDGIPPPIKSFKEMK 218
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LP +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 219 LPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 278
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 279 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 315
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/68 (76%), Positives = 59/68 (86%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQTH I
Sbjct: 248 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGI 307
Query: 66 IQYYCAAL 73
++YYC L
Sbjct: 308 LEYYCRLL 315
>gi|34364998|emb|CAE46035.1| hypothetical protein [Homo sapiens]
Length = 496
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 2 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 61
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 62 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 121
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 122 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 158
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 88 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 147
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 148 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 189
>gi|213510948|ref|NP_001133799.1| probable ATP-dependent RNA helicase DDX41 [Salmo salar]
gi|209155372|gb|ACI33918.1| Probable ATP-dependent RNA helicase DDX41 [Salmo salar]
Length = 615
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW APR IL++P HD +R+ ILV+GD +PP SFR MK
Sbjct: 121 SVKEMAKGIIYDDPIKTSWLAPRYILNMPPARHDRVRKKYHILVDGDGIPPPIKSFREMK 180
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P+++++ L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LPI+MF LEQE
Sbjct: 181 FPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFSLEQE 240
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELA+QTH II+YYC L
Sbjct: 241 KRLPFCKSEGPYGLIICPSRELAKQTHTIIEYYCKLL 277
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LPI+MF LEQE +LPF EGPYGLIICPSRELA+QT
Sbjct: 207 TILSGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKRLPFCKSEGPYGLIICPSRELAKQT 266
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H II+YYC L +R+ L IGG+ + ++V+K G+
Sbjct: 267 HTIIEYYCKLLEEEGAPHMRSVLCIGGMSVKDQMEVVKHGVH 308
>gi|74207549|dbj|BAE40025.1| unnamed protein product [Mus musculus]
Length = 622
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|14042692|dbj|BAB55355.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 122/157 (77%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVREKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|119605384|gb|EAW84978.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_b [Homo
sapiens]
Length = 347
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 80/112 (71%), Gaps = 6/112 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQTH I
Sbjct: 217 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGI 276
Query: 66 IQYYCAAL-----PIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAP 112
++YYC L P+ LR L IGG+ + + ++ I+ +Q + + W P
Sbjct: 277 LEYYCRLLQEDSSPL-LRCALCIGGMSVKEQMETIRHAVQSSADHQRPWTRP 327
>gi|270047502|ref|NP_598820.2| probable ATP-dependent RNA helicase DDX41 [Mus musculus]
gi|341940433|sp|Q91VN6.2|DDX41_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX41; AltName:
Full=DEAD box protein 41
gi|74142777|dbj|BAE33914.1| unnamed protein product [Mus musculus]
Length = 622
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|15030112|gb|AAH11308.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Mus musculus]
Length = 622
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|74191640|dbj|BAE30391.1| unnamed protein product [Mus musculus]
Length = 622
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|395837035|ref|XP_003791451.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Otolemur
garnettii]
Length = 621
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +L++ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 127 SVKEMAKGITYDDPIKTSWTPPRYVLNMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 186
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 187 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 246
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 247 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 283
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 213 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 272
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 273 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 314
>gi|90075638|dbj|BAE87499.1| unnamed protein product [Macaca fascicularis]
Length = 457
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 76/100 (76%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQTH I
Sbjct: 217 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGI 276
Query: 66 IQYYCAAL-----PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++YYC L P+ LR L IGG+ + + ++ I+ G+
Sbjct: 277 LEYYCRLLQEDSSPL-LRCALCIGGMSVKEQMETIRHGVH 315
>gi|348575047|ref|XP_003473301.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Cavia
porcellus]
Length = 622
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|156543608|ref|XP_001604318.1| PREDICTED: ATP-dependent RNA helicase abstrakt [Nasonia
vitripennis]
Length = 594
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/153 (68%), Positives = 121/153 (79%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGI+Y DPIKTSWR PR IL+ + H+ IRR I VEG+DVPP SF+ MK +
Sbjct: 130 LAKGIEYTDPIKTSWRPPRTILTKDNVRHERIRRKFGITVEGEDVPPPLRSFKEMKFHKG 189
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQVQGIPA LSGRDIIGIAFTGSGKTLVFVLP++MFCLEQE LP
Sbjct: 190 ILLGLEQKGITKPTPIQVQGIPAVLSGRDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALP 249
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F EGPYGLIICPSRELA+QT+DIIQ+Y +L
Sbjct: 250 FGRNEGPYGLIICPSRELAKQTYDIIQHYTNSL 282
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 81/99 (81%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIAFTGSGKTLVFVLP++MFCLEQE LPF EGPYGLIICPSRELA+QT+DI
Sbjct: 215 SGRDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDI 274
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ+Y +L +R CLAIGGVP+++SLDVI +G+
Sbjct: 275 IQHYTNSLRHHHCPEIRCCLAIGGVPVSESLDVISRGVH 313
>gi|148709265|gb|EDL41211.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Mus musculus]
Length = 633
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 139 SVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 198
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 199 FPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 258
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 259 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 295
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 225 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 284
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 285 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 326
>gi|395736563|ref|XP_002816330.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Pongo abelii]
Length = 802
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +L++ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 308 SVKEMAKGITYDDPIKTSWTPPRYVLNMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 367
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 368 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 427
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 428 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 464
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 394 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 453
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 454 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 495
>gi|41054858|ref|NP_957339.1| probable ATP-dependent RNA helicase DDX41 [Danio rerio]
gi|27881965|gb|AAH44528.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Danio rerio]
Length = 306
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 121/157 (77%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y DPIKTSW APR ILS+P H+ R+ ILVEG+ +P SFR MK
Sbjct: 119 SVKEMAKGITYEDPIKTSWNAPRYILSMPAVRHERARKKYHILVEGEGIPAPIKSFREMK 178
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P+++++ L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LPI+MFCLEQE
Sbjct: 179 FPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQE 238
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH II+YYC L
Sbjct: 239 KRLPFCKREGPYGLIICPSRELARQTHGIIEYYCKLL 275
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 4/98 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LPI+MFCLEQE +LPF EGPYGLIICPSRELARQTH I
Sbjct: 208 SGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSRELARQTHGI 267
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGI 99
I+YYC L +R L IGG+ + + ++V+K G+
Sbjct: 268 IEYYCKLLEDEGAPQMRCALCIGGMSVKEQMEVVKHGV 305
>gi|344240368|gb|EGV96471.1| putative ATP-dependent RNA helicase DDX41 [Cricetulus griseus]
Length = 622
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +L++ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 128 SVKEMAKGITYDDPIKTSWTPPRYVLNMSEERHERVRKRYHILVEGDGIPPPIKSFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 188 FPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 248 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 284
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 274 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 315
>gi|354471937|ref|XP_003498197.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Cricetulus
griseus]
Length = 638
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/157 (63%), Positives = 123/157 (78%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW PR +L++ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 144 SVKEMAKGITYDDPIKTSWTPPRYVLNMSEERHERVRKRYHILVEGDGIPPPIKSFKEMK 203
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 204 FPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 263
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 264 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 300
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 230 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 289
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 290 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 331
>gi|307203840|gb|EFN82776.1| ATP-dependent RNA helicase abstrakt [Harpegnathos saltator]
Length = 624
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/153 (67%), Positives = 120/153 (78%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSW PR IL L + H+ +RR LRILVEGD+VPP SF+ MK
Sbjct: 134 LAKGIQYKDPIKTSWHPPRVILHLGEIRHEKVRRKLRILVEGDEVPPPLKSFKEMKFHRG 193
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQVQGIP LSGRD+IGIA TGSGKTLVFVLPI+ FCLEQE +P
Sbjct: 194 ILYGLEQKGIIKPTPIQVQGIPTVLSGRDMIGIASTGSGKTLVFVLPIIEFCLEQELDMP 253
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT+DII++Y +L
Sbjct: 254 FIKKEGPYGLIICPSRELAKQTYDIIRHYTNSL 286
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 81/102 (79%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIA TGSGKTLVFVLPI+ FCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 216 TVLSGRDMIGIASTGSGKTLVFVLPIIEFCLEQELDMPFIKKEGPYGLIICPSRELAKQT 275
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII++Y +L +R+CLAIGGVP+++SL +I KG+
Sbjct: 276 YDIIRHYTNSLRQADCPEIRSCLAIGGVPVSESLVIINKGVH 317
>gi|307174080|gb|EFN64767.1| ATP-dependent RNA helicase abstrakt [Camponotus floridanus]
Length = 620
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/153 (66%), Positives = 122/153 (79%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKT+W+ PR ILS + H+ +RR LRILVEGD+VPP +F+ MK +
Sbjct: 130 LAKGIQYKDPIKTNWQPPRIILSFGEARHERVRRKLRILVEGDEVPPPLKTFKEMKFHKG 189
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQVQGIP LSGRD+IGIA TGSGKTLVFVLPI+ FCLEQE +P
Sbjct: 190 ILYGLEQKGIIKPTPIQVQGIPTVLSGRDMIGIASTGSGKTLVFVLPIIEFCLEQEIDMP 249
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT+DII++Y +L
Sbjct: 250 FIKKEGPYGLIICPSRELAKQTYDIIRHYTNSL 282
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIA TGSGKTLVFVLPI+ FCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 212 TVLSGRDMIGIASTGSGKTLVFVLPIIEFCLEQEIDMPFIKKEGPYGLIICPSRELAKQT 271
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII++Y +L +R CLAIGGVP+++SL +I KG+
Sbjct: 272 YDIIRHYTNSLRQVDCPEIRCCLAIGGVPVSESLAIINKGVH 313
>gi|405975997|gb|EKC40522.1| Putative ATP-dependent RNA helicase DDX41 [Crassostrea gigas]
Length = 624
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 119/156 (76%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KGIQY+ PIKT WR PRCIL L + H+ +R+ ILVEG+++PP +F+ MK P++++
Sbjct: 136 KGIQYDKPIKTGWRPPRCILKLSESYHEKVRKKRHILVEGEELPPPIKTFKEMKFPKAIL 195
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
L+ KGI PTPIQ+QG+P L GRD+IGIAFTGSGKTLVF LPI+MF LEQE KL F+
Sbjct: 196 SGLKKKGIVTPTPIQIQGLPTVLQGRDMIGIAFTGSGKTLVFTLPIIMFALEQEKKLSFV 255
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
EGPYGL ICPSRELARQT+DII+YYC L F
Sbjct: 256 KNEGPYGLCICPSRELARQTNDIIEYYCKCLADDGF 291
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T RD+IGIAFTGSGKTLVF LPI+MF LEQE KL F+ EGPYGL ICPSRELARQT
Sbjct: 216 TVLQGRDMIGIAFTGSGKTLVFTLPIIMFALEQEKKLSFVKNEGPYGLCICPSRELARQT 275
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII+YYC L LR L IGGV + ++ IK+G+
Sbjct: 276 NDIIEYYCKCLADDGFPLLRNVLCIGGVSVKDQMEAIKQGVH 317
>gi|125777504|ref|XP_001359629.1| GA13135 [Drosophila pseudoobscura pseudoobscura]
gi|54639377|gb|EAL28779.1| GA13135 [Drosophila pseudoobscura pseudoobscura]
Length = 619
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/153 (66%), Positives = 120/153 (78%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSWR PR I ++ ++ I+++LRILVEG++ P SFR MK P+
Sbjct: 128 LAKGIQYEDPIKTSWRPPRYIEAMSEEERQAIQKHLRILVEGENPSPPIRSFREMKFPKG 187
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L AKGIK PTPIQVQG+P L+GRD+IGIAFTGSGKTLVFVLPILMF LEQE LP
Sbjct: 188 ILDGLAAKGIKTPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPILMFALEQEYSLP 247
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F EGPYGLIICPSRELA+QTH+IIQ+Y L
Sbjct: 248 FERNEGPYGLIICPSRELAKQTHEIIQHYSKHL 280
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 79/97 (81%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLPILMF LEQE LPF EGPYGLIICPSRELA+QTH+IIQ
Sbjct: 215 RDLIGIAFTGSGKTLVFVLPILMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQ 274
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+Y L +R+CLA+GG+P++++LDVI +G+
Sbjct: 275 HYSKHLQACGMPEVRSCLAMGGLPVSEALDVISRGVH 311
>gi|332024917|gb|EGI65105.1| ATP-dependent RNA helicase abstrakt [Acromyrmex echinatior]
Length = 625
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/153 (65%), Positives = 122/153 (79%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY D IKT+W+ PR IL+L + H+ +RR LRILVEGD+VPP +F+ MK +
Sbjct: 135 LAKGIQYKDSIKTNWQPPRVILNLGEMRHERVRRKLRILVEGDEVPPPLKTFKEMKFHKG 194
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQVQGIP LSGRD+IGIA TGSGKTLVFVLPI+ FCLEQE +P
Sbjct: 195 ILYGLEQKGIIKPTPIQVQGIPTVLSGRDMIGIASTGSGKTLVFVLPIIEFCLEQEIDMP 254
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT+DII++Y +L
Sbjct: 255 FIKKEGPYGLIICPSRELAKQTYDIIRHYTNSL 287
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIA TGSGKTLVFVLPI+ FCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 217 TVLSGRDMIGIASTGSGKTLVFVLPIIEFCLEQEIDMPFIKKEGPYGLIICPSRELAKQT 276
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII++Y +L +R CLAIGGVP+++SL +I KG+
Sbjct: 277 YDIIRHYTNSLRQTDCPEIRCCLAIGGVPVSESLAIINKGVH 318
>gi|431892730|gb|ELK03163.1| hypothetical protein PAL_GLEAN10016954 [Pteropus alecto]
Length = 1458
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/157 (62%), Positives = 122/157 (77%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DPIKTSW P +L++ ++ H+ +R+ ILVEGD +PP SF+ MK
Sbjct: 964 SVKEMAKGITYDDPIKTSWTPPCYVLNMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK 1023
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 1024 FPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 1083
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 1084 KRLPFSKREGPYGLIICPSRELARQTHSILEYYCRLL 1120
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 76/100 (76%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQTH I
Sbjct: 1053 SGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHSI 1112
Query: 66 IQYYCAAL-----PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++YYC L P+ LR L IGG+ + + ++ I+ G+
Sbjct: 1113 LEYYCRLLQEDSSPL-LRCALCIGGMSVKEQMETIRHGVH 1151
>gi|322784405|gb|EFZ11376.1| hypothetical protein SINV_10914 [Solenopsis invicta]
Length = 626
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/153 (65%), Positives = 121/153 (79%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKT+W+ PR IL+L + H+ +RR LRILVEGD VPP +F+ MK +
Sbjct: 136 LAKGIQYKDPIKTNWQPPRVILNLGEMRHERVRRKLRILVEGDKVPPPLKAFKEMKFHKG 195
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ LE KGI KPTPIQVQGIP LSGRD+IGIA TGSGKTLVFVLPI+ FCLEQE +P
Sbjct: 196 ILYGLEQKGIVKPTPIQVQGIPTVLSGRDMIGIASTGSGKTLVFVLPIIEFCLEQEIDMP 255
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLIICPSRELA+QT DII++Y ++
Sbjct: 256 FIKKEGPYGLIICPSRELAKQTFDIIRHYTNSI 288
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIA TGSGKTLVFVLPI+ FCLEQE +PF+ EGPYGLIICPSRELA+QT
Sbjct: 218 TVLSGRDMIGIASTGSGKTLVFVLPIIEFCLEQEIDMPFIKKEGPYGLIICPSRELAKQT 277
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
DII++Y ++ +R CLAIGGVP+++SL VI KG+
Sbjct: 278 FDIIRHYTNSIRQTDCPEIRCCLAIGGVPVSESLAVINKGVH 319
>gi|6118254|gb|AAF04040.1|AF187729_1 DEAD-box protein abstrakt [Drosophila melanogaster]
Length = 614
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 116/153 (75%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY PIKT+W+ PR I + ++ + +R LRILVEG+ P SFR MK P+
Sbjct: 123 LAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKG 182
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L AKGIK PTPIQVQG+P L+GRD+IGIAFTGSGKTLVFVLP++MF LEQE LP
Sbjct: 183 ILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLP 242
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F EGPYGLIICPSRELA+QTH+IIQ+Y L
Sbjct: 243 FERNEGPYGLIICPSRELAKQTHEIIQHYSKHL 275
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 79/97 (81%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLP++MF LEQE LPF EGPYGLIICPSRELA+QTH+IIQ
Sbjct: 210 RDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQ 269
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+Y L +R+CLA+GG+P++++LDVI +G+
Sbjct: 270 HYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVH 306
>gi|118344314|ref|NP_001071981.1| zinc finger protein [Ciona intestinalis]
gi|92081542|dbj|BAE93318.1| zinc finger protein [Ciona intestinalis]
Length = 627
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/163 (60%), Positives = 117/163 (71%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
QS+ + +GI YN P+ T W P I Q+HD IR +LRI VEG +VPP SFR M
Sbjct: 132 QSVQDLAQGITYNTPLVTGWSPPHFIRERTQQIHDKIRFHLRIDVEGQNVPPPIRSFRDM 191
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
K P+ ++ L+ K I+KPTPIQ QGIP LSGRD+IGIAFTGSGKTLVF LP+LMFC+EQ
Sbjct: 192 KFPKPIIIGLKKKHIRKPTPIQTQGIPVVLSGRDMIGIAFTGSGKTLVFTLPLLMFCIEQ 251
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
E KLPFL EGPYGLI+CPSRELARQTH ++ YY L G
Sbjct: 252 EKKLPFLQNEGPYGLIVCPSRELARQTHQVMSYYAKHLEGGGL 294
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 77/97 (79%), Gaps = 4/97 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP+LMFC+EQE KLPFL EGPYGLI+CPSRELARQTH +
Sbjct: 222 SGRDMIGIAFTGSGKTLVFTLPLLMFCIEQEKKLPFLQNEGPYGLIVCPSRELARQTHQV 281
Query: 66 IQYYCAALP---IP-LRTCLAIGGVPMNQSLDVIKKG 98
+ YY L +P LR L IGG+P +++++I+KG
Sbjct: 282 MSYYAKHLEGGGLPSLRIALCIGGIPAKETVNIIRKG 318
>gi|17977678|ref|NP_524220.1| abstrakt [Drosophila melanogaster]
gi|12643521|sp|Q9V3C0.1|DDX41_DROME RecName: Full=ATP-dependent RNA helicase abstrakt; Short=DEAD box
protein abstrakt
gi|6635811|gb|AAF19985.1|AF212866_1 abstrakt protein [Drosophila melanogaster]
gi|7296891|gb|AAF52165.1| abstrakt [Drosophila melanogaster]
gi|15291815|gb|AAK93176.1| LD28839p [Drosophila melanogaster]
gi|220945834|gb|ACL85460.1| abs-PA [synthetic construct]
gi|220955594|gb|ACL90340.1| abs-PA [synthetic construct]
Length = 619
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 116/153 (75%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY PIKT+W+ PR I + ++ + +R LRILVEG+ P SFR MK P+
Sbjct: 128 LAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKG 187
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L AKGIK PTPIQVQG+P L+GRD+IGIAFTGSGKTLVFVLP++MF LEQE LP
Sbjct: 188 ILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLP 247
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F EGPYGLIICPSRELA+QTH+IIQ+Y L
Sbjct: 248 FERNEGPYGLIICPSRELAKQTHEIIQHYSKHL 280
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 79/97 (81%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLP++MF LEQE LPF EGPYGLIICPSRELA+QTH+IIQ
Sbjct: 215 RDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQ 274
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+Y L +R+CLA+GG+P++++LDVI +G+
Sbjct: 275 HYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVH 311
>gi|345308684|ref|XP_003428729.1| PREDICTED: probable ATP-dependent RNA helicase DDX41, partial
[Ornithorhynchus anatinus]
Length = 609
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 115/157 (73%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + GI SW+ PR +LS+ + HD +R+ ILVEG+ +PP SFR MK
Sbjct: 117 SVKEMANGITXXXXXXRSWKPPRSVLSMSEARHDRVRKKYHILVEGEGIPPPIKSFREMK 176
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLEQE
Sbjct: 177 FPAAVLRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQE 236
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 237 KRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 273
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 203 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 262
Query: 63 HDIIQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L PLR L IGG+ + + ++ I+ G+
Sbjct: 263 HGILEYYCRLLQEENSPPLRCALCIGGMSVKEQMETIRHGVH 304
>gi|75321947|sp|Q5Z6G5.1|RH35B_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 35B
gi|53793229|dbj|BAD54454.1| putative DEAD-box protein abstrakt [Oryza sativa Japonica Group]
gi|125598365|gb|EAZ38145.1| hypothetical protein OsJ_22496 [Oryza sativa Japonica Group]
Length = 619
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 137/196 (69%), Gaps = 14/196 (7%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
+ P+ L +Q ++I++ R L +P+ + I KGI Y++PI T WR
Sbjct: 95 VTPAERLLQQEREMIEHLSD------RKAL----MPVGE----IAKGISYSEPITTGWRP 140
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + +P D +RR+ ILV+GDDVPP SF ++LPE ++RAL KGI+KPTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
VQG+P ALSGRD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+GLI+CPSRE
Sbjct: 201 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRE 260
Query: 232 LARQTHDIIQYYCAAL 247
LARQTH++I+ + A L
Sbjct: 261 LARQTHEVIEMFLAPL 276
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+GLI+CPSRELARQTH++
Sbjct: 209 SGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELARQTHEV 268
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A L +R L IGGV M ++V+KKG+
Sbjct: 269 IEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVH 307
>gi|125556618|gb|EAZ02224.1| hypothetical protein OsI_24319 [Oryza sativa Indica Group]
Length = 620
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 137/196 (69%), Gaps = 14/196 (7%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
+ P+ L +Q ++I++ R L +P+ + I KGI Y++PI T WR
Sbjct: 96 VTPAERLLQQEREMIEHLSD------RKAL----MPVGE----IAKGISYSEPITTGWRP 141
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + +P D +RR+ ILV+GDDVPP SF ++LPE ++RAL KGI+KPTPIQ
Sbjct: 142 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 201
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
VQG+P ALSGRD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+GLI+CPSRE
Sbjct: 202 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRE 261
Query: 232 LARQTHDIIQYYCAAL 247
LARQTH++I+ + A L
Sbjct: 262 LARQTHEVIELFLAPL 277
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+GLI+CPSRELARQTH++
Sbjct: 210 SGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELARQTHEV 269
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A L +R L IGGV M ++V+KKG+
Sbjct: 270 IELFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVH 308
>gi|390351458|ref|XP_796437.3| PREDICTED: probable ATP-dependent RNA helicase DDX41
[Strongylocentrotus purpuratus]
Length = 620
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 114/151 (75%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KGI Y++ + T W+ PRCI L + HD +R+ L ILVEG D+PP F+ MK P+S++
Sbjct: 132 KGIIYSESLVTGWKPPRCITELGEARHDRVRKKLHILVEGHDIPPPIKHFKEMKFPKSII 191
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
L+ KGI KPTPIQ+QG+P L GRD+IGIAFTGSGKTLVF LPI+MF LEQE ++PF+
Sbjct: 192 YGLKKKGITKPTPIQIQGLPVILEGRDMIGIAFTGSGKTLVFSLPIVMFALEQEKRMPFI 251
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGPYGLIICPSRELARQTHD I ++ L
Sbjct: 252 KNEGPYGLIICPSRELARQTHDGIMHFIKCL 282
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 72/97 (74%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF LPI+MF LEQE ++PF+ EGPYGLIICPSRELARQTHD I
Sbjct: 217 RDMIGIAFTGSGKTLVFSLPIVMFALEQEKRMPFIKNEGPYGLIICPSRELARQTHDGIM 276
Query: 68 YYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
++ L LR+ L IGGV + + +D ++ G+
Sbjct: 277 HFIKCLEADNQPTLRSMLCIGGVSVKEQMDAVRSGVH 313
>gi|321479275|gb|EFX90231.1| hypothetical protein DAPPUDRAFT_190268 [Daphnia pulex]
Length = 623
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 119/153 (77%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ +GIQY DPIKTSW PRC+L++P DI+R L I VEG+DVP SF MK P+
Sbjct: 133 LARGIQYEDPIKTSWTPPRCVLNMPRDYPDILRGKLCITVEGEDVPLPIPSFNAMKFPKG 192
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L+ KGIK+P+PIQ+QG+P LSGRD+IGIAFTGSGKTLVFVLPI++F LEQE K+P
Sbjct: 193 ILVGLQKKGIKQPSPIQIQGLPTVLSGRDMIGIAFTGSGKTLVFVLPIVVFSLEQELKMP 252
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
FLP EGP+GLI+CPSRELA+Q + ++++ L
Sbjct: 253 FLPNEGPFGLIVCPSRELAKQILETVEHFADCL 285
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 81/102 (79%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVFVLPI++F LEQE K+PFLP EGP+GLI+CPSRELA+Q
Sbjct: 215 TVLSGRDMIGIAFTGSGKTLVFVLPIVVFSLEQELKMPFLPNEGPFGLIVCPSRELAKQI 274
Query: 63 HDIIQYYCAALP---IP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++++ L +P +++CL IGG P+NQSL++I +G+
Sbjct: 275 LETVEHFADCLAQQGMPRIKSCLIIGGTPVNQSLEIINRGVH 316
>gi|281207287|gb|EFA81470.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 922
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/151 (62%), Positives = 115/151 (76%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
K I Y D IKTSW+AP I + DQ + IR++L ILV G+DVPP SFR MKLP +++
Sbjct: 159 KDIVYKDSIKTSWKAPTYIRNRSDQENQKIRQDLHILVSGEDVPPPITSFREMKLPHAII 218
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
L+ KGIKKPTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP+++F +E E KLP +
Sbjct: 219 DCLKKKGIKKPTPIQIQGIPVILSGRDMIGIAFTGSGKTLVFTLPMVLFAMEMELKLPLI 278
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGP+GLIICPSRELARQT+D + AL
Sbjct: 279 SGEGPFGLIICPSRELARQTYDGVVEMAGAL 309
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 69/98 (70%), Gaps = 5/98 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF LP+++F +E E KLP + GEGP+GLIICPSRELARQT+D +
Sbjct: 244 RDMIGIAFTGSGKTLVFTLPMVLFAMEMELKLPLISGEGPFGLIICPSRELARQTYDGVV 303
Query: 68 YYCAALPI-----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
AL PLRT L +GG+ + ++KG+
Sbjct: 304 EMAGALSKAGGYPPLRTLLCMGGIDFREQEPELRKGVH 341
>gi|427797625|gb|JAA64264.1| Putative abstrakt, partial [Rhipicephalus pulchellus]
Length = 656
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 119/153 (77%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY+ PI+T WR P +++ + + +R+ RILVEG+ +P +F+ MK P +
Sbjct: 166 LAKGIQYDQPIQTGWRPPAYLVNTTLEQQEKVRQKYRILVEGEGIPAPITTFKEMKFPRT 225
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ +L KGI KPTPIQ+QG+PA LSGRD+IGIAFTGSGKTLVFVLP+LMFCLEQE +LP
Sbjct: 226 ILSSLRHKGITKPTPIQMQGLPAVLSGRDMIGIAFTGSGKTLVFVLPLLMFCLEQEKRLP 285
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLI+CPSRELA+QT++I+ ++ L
Sbjct: 286 FIQNEGPYGLIVCPSRELAKQTYEIVSFFVRDL 318
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 77/99 (77%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP+LMFCLEQE +LPF+ EGPYGLI+CPSRELA+QT++I
Sbjct: 251 SGRDMIGIAFTGSGKTLVFVLPLLMFCLEQEKRLPFIQNEGPYGLIVCPSRELAKQTYEI 310
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ L LR CL IGG + + L+V+++G+
Sbjct: 311 VSFFVRDLEGAGYPSLRGCLCIGGTSVREQLEVVRRGVH 349
>gi|326673881|ref|XP_003200020.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like, partial
[Danio rerio]
Length = 477
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 109/139 (78%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPT 168
W APR ILS+P H+ +R+ ILVEG+ +P SFR MK P+++++ L+ KGI PT
Sbjct: 1 WNAPRYILSMPAVRHERVRKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPT 60
Query: 169 PIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICP 228
PIQ+QGIP LSGRD+IGIAFTGSGKTLVF LPI+MFCLEQE +LPF EGPYGLIICP
Sbjct: 61 PIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICP 120
Query: 229 SRELARQTHDIIQYYCAAL 247
SRELARQTH II+YYC L
Sbjct: 121 SRELARQTHGIIEYYCKLL 139
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LPI+MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 69 TILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSRELARQT 128
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H II+YYC L +R L IGG+ + + ++V+K G+
Sbjct: 129 HGIIEYYCKLLEDEGAPQMRCALCIGGMSVKEQMEVVKHGVH 170
>gi|391330570|ref|XP_003739731.1| PREDICTED: ATP-dependent RNA helicase abstrakt-like [Metaseiulus
occidentalis]
Length = 609
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 117/153 (76%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG+QY + I+TSW+ P I ++ D IR RILVEG+D+PP +F+ MK P
Sbjct: 117 LAKGVQYTESIRTSWKPPSYICDWDEKKCDKIREKYRILVEGEDIPPPIRTFKEMKFPRI 176
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+ AL+ + I KP+PIQ+QG+PA LSGRDIIGIAFTGSGKTLVFVLP++MFC+EQE K+P
Sbjct: 177 IRSALKKRDIVKPSPIQIQGLPAVLSGRDIIGIAFTGSGKTLVFVLPLIMFCVEQERKIP 236
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F EGPYGLI+CPSRELA+QTHDI++++ L
Sbjct: 237 FGTKEGPYGLIVCPSRELAKQTHDIVEHFINQL 269
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 76/101 (75%), Gaps = 6/101 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIAFTGSGKTLVFVLP++MFC+EQE K+PF EGPYGLI+CPSRELA+QTHDI
Sbjct: 202 SGRDIIGIAFTGSGKTLVFVLPLIMFCVEQERKIPFGTKEGPYGLIVCPSRELAKQTHDI 261
Query: 66 IQYYCAALPI------PLRTCLAIGGVPMNQSLDVIKKGIQ 100
++++ L LR+CL IGG + L+ +++G+
Sbjct: 262 VEHFINQLGREPNRFPKLRSCLCIGGTALKDQLETVRRGVH 302
>gi|240994916|ref|XP_002404560.1| DEAD box protein abstrakt, putative [Ixodes scapularis]
gi|215491582|gb|EEC01223.1| DEAD box protein abstrakt, putative [Ixodes scapularis]
Length = 568
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 120/159 (75%), Gaps = 2/159 (1%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILS-LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPE 153
+ KGIQY+ PI+T WR P + S LP Q DI R+ ILVEG+ +P +F+ MK P
Sbjct: 78 LAKGIQYDQPIQTGWRPPAYLTSMLPKQQEDI-RKKFHILVEGEGIPSPITTFKEMKFPR 136
Query: 154 SLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
+++ +L KGI +PTPIQ+QG+PA LSGRD+IGIAFTGSGKTLVFVLP+LMFCLEQE +L
Sbjct: 137 TILASLRRKGITQPTPIQMQGLPAVLSGRDMIGIAFTGSGKTLVFVLPLLMFCLEQEKRL 196
Query: 214 PFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
PF+ EGPYGL++CPSRELA+QT +I+ ++ AL +
Sbjct: 197 PFVQNEGPYGLVVCPSRELAKQTFEIVSFFVRALEEAGY 235
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 77/99 (77%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP+LMFCLEQE +LPF+ EGPYGL++CPSRELA+QT +I
Sbjct: 163 SGRDMIGIAFTGSGKTLVFVLPLLMFCLEQEKRLPFVQNEGPYGLVVCPSRELAKQTFEI 222
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ AL LR CL IGG + + L+++++G+
Sbjct: 223 VSFFVRALEEAGYPSLRGCLCIGGTSVREQLEIVRRGVH 261
>gi|299471815|emb|CBN79482.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 660
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 118/158 (74%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG +Y + + TSWR P+ + ++ D +R ILV+G+ VPP SFR MKLP+
Sbjct: 168 VAKGTRYTEALTTSWRPPKYYRDMTEEDCDKLREKWSILVDGEKVPPPIKSFREMKLPDP 227
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ ALEAKGIK+PTPIQVQG+P ALSGRD+IGIAFTGSGKT+ F +P++M LE+E KLP
Sbjct: 228 MLAALEAKGIKRPTPIQVQGVPVALSGRDMIGIAFTGSGKTVTFSIPLIMLALEEEMKLP 287
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+ GEGP+G+I+CPSRELARQT D++ Y+C L G F
Sbjct: 288 VVGGEGPFGVILCPSRELARQTFDVVDYFCKHLHRGGF 325
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 16/126 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKT+ F +P++M LE+E KLP + GEGP+G+I+CPSRELARQT D+
Sbjct: 253 SGRDMIGIAFTGSGKTVTFSIPLIMLALEEEMKLPVVGGEGPFGVILCPSRELARQTFDV 312
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
+ Y+C L LRT L IGG +D I++ + CI++ P +
Sbjct: 313 VDYFCKHLHRGGFPELRTVLCIGGEDKRSQIDPIQR------------QGVHCIVATPGR 360
Query: 122 VHDIIR 127
+ D++
Sbjct: 361 ISDLLH 366
>gi|320170169|gb|EFW47068.1| ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC 30864]
Length = 712
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 114/158 (72%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
I KG+ Y + + SWR PR I +L D I + I+VEGDD+PP +FR MKLP+S
Sbjct: 218 IAKGVVYTESMPKSWRPPRYIEALTDDERQKIWEEMHIIVEGDDIPPPIKTFREMKLPKS 277
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++ L +GIK PTPIQ++GIP ALSGRD+IGIAFTGSGKTLVF LPI+MF LEQE KL
Sbjct: 278 IIKHLAKRGIKAPTPIQIEGIPVALSGRDMIGIAFTGSGKTLVFSLPIVMFALEQELKLG 337
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F GEGPYGLI+ PSRELA+QT+D +Q Y L F
Sbjct: 338 FTSGEGPYGLILVPSRELAKQTYDNLQAYAKVLATEGF 375
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LPI+MF LEQE KL F GEGPYGLI+ PSRELA+QT+D
Sbjct: 303 SGRDMIGIAFTGSGKTLVFSLPIVMFALEQELKLGFTSGEGPYGLILVPSRELAKQTYDN 362
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+Q Y L LR L +GGV M + LD ++ G+
Sbjct: 363 LQAYAKVLATEGFPLLRVALCMGGVNMREQLDSMRDGVH 401
>gi|443704392|gb|ELU01455.1| hypothetical protein CAPTEDRAFT_148841 [Capitella teleta]
Length = 580
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 113/146 (77%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY + I+T W+ P+ I +P+ H+ +RR ILVEG+ +P +F+ MK P+
Sbjct: 90 LAKGIQYQESIQTGWQPPKHIQDMPESRHNRVRRKHHILVEGESLPAPIKTFKEMKFPKP 149
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
L+ L+ GIK PTPIQ+QGIP LSGRD+IGIAFTGSGKT+VF LP++MFCLEQE +LP
Sbjct: 150 LLSCLKKMGIKAPTPIQIQGIPTVLSGRDMIGIAFTGSGKTIVFTLPLMMFCLEQEKRLP 209
Query: 215 FLPGEGPYGLIICPSRELARQTHDII 240
F+ EGPYGLIICPSRELARQT+DII
Sbjct: 210 FIRDEGPYGLIICPSRELARQTNDII 235
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKT+VF LP++MFCLEQE +LPF+ EGPYGLIICPSRELARQT
Sbjct: 172 TVLSGRDMIGIAFTGSGKTIVFTLPLMMFCLEQEKRLPFIRDEGPYGLIICPSRELARQT 231
Query: 63 HDII----QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII QY +R+ L IGGV + + +DVI KG+
Sbjct: 232 NDIIVSISQYMENEGFPAIRSGLCIGGVAVKEQMDVIHKGVH 273
>gi|218190067|gb|EEC72494.1| hypothetical protein OsI_05864 [Oryza sativa Indica Group]
Length = 513
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 119/162 (73%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DP+KT W+ P + +P D +RR ILV+GDDVPP FR ++
Sbjct: 129 SVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLR 188
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LPE ++R L KGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 189 LPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEE 248
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+P +PGEGP+G+IICPSRELA+QT+D+I+ + L +
Sbjct: 249 MMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGY 290
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 218 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDV 277
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + L +R L IGGV M LDV+KKG+
Sbjct: 278 IEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVH 316
>gi|143455555|sp|Q0E3X4.2|RH35A_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 35A
gi|51535964|dbj|BAD38045.1| putative DEAD-box protein abstrakt [Oryza sativa Japonica Group]
Length = 627
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 119/162 (73%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DP+KT W+ P + +P D +RR ILV+GDDVPP FR ++
Sbjct: 129 SVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLR 188
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LPE ++R L KGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 189 LPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEE 248
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+P +PGEGP+G+IICPSRELA+QT+D+I+ + L +
Sbjct: 249 MMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGY 290
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 218 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDV 277
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + L +R L IGGV M LDV+KKG+
Sbjct: 278 IEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVH 316
>gi|196015847|ref|XP_002117779.1| hypothetical protein TRIADDRAFT_51106 [Trichoplax adhaerens]
gi|190579664|gb|EDV19755.1| hypothetical protein TRIADDRAFT_51106 [Trichoplax adhaerens]
Length = 569
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 116/153 (75%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGI+Y ++TSW+ P + L + D +R+ I+VEG DVPP +F+ MK P+S
Sbjct: 79 LAKGIKYEKSLRTSWQPPGYLQRLSEGARDRLRKKWHIIVEGADVPPPVKTFKEMKFPKS 138
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ +L+ +GI PTPIQ+QGIPA L GRD+IGIAFTGSGKTLVF LP++MF LEQET LP
Sbjct: 139 IIHSLKKQGITHPTPIQIQGIPAVLFGRDMIGIAFTGSGKTLVFTLPLIMFALEQETGLP 198
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLI+CPSRELARQT++ I+ +C AL
Sbjct: 199 FVRNEGPYGLIMCPSRELARQTYNTIKRFCQAL 231
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF LP++MF LEQET LPF+ EGPYGLI+CPSRELARQT++ I+
Sbjct: 166 RDMIGIAFTGSGKTLVFTLPLIMFALEQETGLPFVRNEGPYGLIMCPSRELARQTYNTIK 225
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+C AL +RT L IGG+ M + D +++G+
Sbjct: 226 RFCQALTADGHPEIRTMLCIGGISMKEQTDAMRRGVH 262
>gi|324504798|gb|ADY42068.1| ATP-dependent RNA helicase DDX41 [Ascaris suum]
Length = 657
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 115/157 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
I +G++Y + IKTSWR PR ILS+ + H +RR I+V+G+D+PP SF MK P +
Sbjct: 166 IARGVKYEESIKTSWRPPRHILSMSEAEHAAVRRKKGIVVDGEDIPPPIGSFIEMKFPPA 225
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++R+L K I PT IQ+QGIP LSGRD+IGIA TGSGKTL F LP++MFCLEQE LP
Sbjct: 226 IIRSLREKKIISPTVIQMQGIPVVLSGRDMIGIASTGSGKTLTFALPLVMFCLEQEISLP 285
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
F GEGPYGLII PSRELA+Q HD+I+ ++ IGS
Sbjct: 286 FRHGEGPYGLIIVPSRELAKQIHDVIERIFESITIGS 322
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F LP++MFCLEQE LPF GEGPYGLII PSRELA+Q HD+
Sbjct: 251 SGRDMIGIASTGSGKTLTFALPLVMFCLEQEISLPFRHGEGPYGLIIVPSRELAKQIHDV 310
Query: 66 IQYYCAALPI-----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ ++ I LR L IGG+P+ + V ++G+
Sbjct: 311 IERIFESITIGSGFPRLRVGLCIGGLPIGEQARVFERGVH 350
>gi|125580822|gb|EAZ21753.1| hypothetical protein OsJ_05388 [Oryza sativa Japonica Group]
Length = 516
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 119/162 (73%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y+DP+KT W+ P + +P D +RR ILV+GDDVPP FR ++
Sbjct: 18 SVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLR 77
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LPE ++R L KGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 78 LPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEE 137
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+P +PGEGP+G+IICPSRELA+QT+D+I+ + L +
Sbjct: 138 MMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGY 179
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 107 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDV 166
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + L +R L IGGV M LDV+KKG+
Sbjct: 167 IEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVH 205
>gi|66807079|ref|XP_637262.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|74996736|sp|Q54KG1.1|DDX41_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx41; AltName:
Full=DEAD box protein 41
gi|60465669|gb|EAL63748.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 671
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 116/151 (76%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
K + Y D IKT+WRAPR IL ++ H +R L I+ +G+D+PP +F+ MK+P+ ++
Sbjct: 175 KDVIYTDSIKTNWRAPRYILERDEKDHQKVRDQLNIITDGEDIPPPITTFKEMKIPKPVI 234
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
L KGIKKP+PIQVQG+P LSGRD+IGIA+TGSGKTLVF LP+++F LE+E KLP +
Sbjct: 235 DVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPII 294
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGP+GLI+CPSRELARQT+D++ + AL
Sbjct: 295 QGEGPFGLILCPSRELARQTYDLVNSFTNAL 325
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 73/98 (74%), Gaps = 5/98 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA+TGSGKTLVF LP+++F LE+E KLP + GEGP+GLI+CPSRELARQT+D++
Sbjct: 260 RDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVN 319
Query: 68 YYCAALPI-----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ AL LRT LAIGG+ + + + KKG+
Sbjct: 320 SFTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVH 357
>gi|358342033|dbj|GAA49588.1| ATP-dependent RNA helicase DDX41 [Clonorchis sinensis]
Length = 1343
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 116/158 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY+ PI+T W P I + D IR+ RIL++G+DVPP +F M+ P +
Sbjct: 854 LAKGIQYDKPIQTGWTPPSYIREQTQEKSDEIRKKHRILIDGEDVPPPIRNFIEMRFPVA 913
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
LV L+A+GI PTPIQ+QG+PA LSGRD+IGIAFTGSGKT+VF +PI++FC++QE K+P
Sbjct: 914 LVDILKARGISNPTPIQMQGLPAVLSGRDMIGIAFTGSGKTMVFAIPIVLFCMDQELKIP 973
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F+PGEGPYGLI+ PSRELARQTH+++ L F
Sbjct: 974 FIPGEGPYGLILGPSRELARQTHEVLSSLVDGLVAAGF 1011
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 68/96 (70%), Gaps = 6/96 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKT+VF +PI++FC++QE K+PF+PGEGPYGLI+ PSRELARQTH+++
Sbjct: 941 RDMIGIAFTGSGKTMVFAIPIVLFCMDQELKIPFIPGEGPYGLILGPSRELARQTHEVLS 1000
Query: 68 Y-----YCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
A P +R L IGG + + ++
Sbjct: 1001 SLVDGLVAAGFP-EIRCNLCIGGTAVKDQAETFRRS 1035
>gi|221113161|ref|XP_002160326.1| PREDICTED: ATP-dependent RNA helicase abstrakt [Hydra
magnipapillata]
Length = 605
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/150 (60%), Positives = 112/150 (74%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
GI Y DPIKTSW PR +L+ ++ H R+ ILVEG +VPP F+ MK P S+++
Sbjct: 119 GITYTDPIKTSWVPPRYVLNYSEERHAQTRKRYCILVEGHNVPPPLKRFKDMKFPRSILQ 178
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
L+ K IK PTPIQ+QG+P LSGRD+IGIAFTGSGKTLVF LPI+MFC+EQE LPF
Sbjct: 179 CLKRKDIKSPTPIQMQGLPTVLSGRDMIGIAFTGSGKTLVFTLPIVMFCVEQEKVLPFRK 238
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGPYGL+I PSRELA+QT+DII + +L
Sbjct: 239 GEGPYGLLIAPSRELAKQTYDIILEFSESL 268
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 71/102 (69%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LPI+MFC+EQE LPF GEGPYGL+I PSRELA+QT
Sbjct: 198 TVLSGRDMIGIAFTGSGKTLVFTLPIVMFCVEQEKVLPFRKGEGPYGLLIAPSRELAKQT 257
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+DII + +L + L+ L IGG + + IK G+
Sbjct: 258 YDIILEFSESLRMDGAPTLKILLCIGGTSVKDQAENIKHGVH 299
>gi|326430321|gb|EGD75891.1| DEAD box polypeptide 41 [Salpingoeca sp. ATCC 50818]
Length = 619
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 116/163 (71%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
+S++ + KGI Y +PI+TSWR PR + +Q ++ IR+ I+VEG D PA +FR M
Sbjct: 128 KSVEELAKGISYAEPIRTSWRPPRHVRHRTEQKNERIRKKWNIIVEGRDCAPAVTNFRDM 187
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
KLP LV L+++GIK PTPIQ+QG+P ALSGRD+IGIAFTGSGKTL F LP +M +EQ
Sbjct: 188 KLPTCLVDYLDSQGIKTPTPIQMQGLPVALSGRDMIGIAFTGSGKTLCFSLPAIMLTMEQ 247
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
E K+PF GEGPY ++CPSRELARQT D ++ Y L G
Sbjct: 248 EIKMPFQRGEGPYACVLCPSRELARQTFDAVKEYAGVLHKGGM 290
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP +M +EQE K+PF GEGPY ++CPSRELARQT D
Sbjct: 218 SGRDMIGIAFTGSGKTLCFSLPAIMLTMEQEIKMPFQRGEGPYACVLCPSRELARQTFDA 277
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSL 92
++ Y L L L +GGV M + L
Sbjct: 278 VKEYAGVLHKGGMPKLNIVLCMGGVDMREQL 308
>gi|169853643|ref|XP_001833501.1| DEAD-box protein abstrakt [Coprinopsis cinerea okayama7#130]
gi|116505540|gb|EAU88435.1| DEAD-box protein abstrakt [Coprinopsis cinerea okayama7#130]
Length = 619
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 116/153 (75%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGI+Y +P+KTSWR P I + + IR I+VEG+DVPP SFR MK+P+
Sbjct: 135 LAKGIRYTEPLKTSWRPPGFIRERSAEKNQAIRDKYHIIVEGEDVPPPIESFRDMKIPDP 194
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++ L++K IK PTPIQ+QGIPAA SGRDIIGIAFTGSGKTL F +P++M LE+E KLP
Sbjct: 195 ILQYLKSKNIKNPTPIQLQGIPAAFSGRDIIGIAFTGSGKTLAFCMPLIMLALEEEAKLP 254
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT++ IQ +C +L
Sbjct: 255 FVQGEGPVGIILCPSRELASQTYENIQTWCTSL 287
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIAFTGSGKTL F +P++M LE+E KLPF+ GEGP G+I+CPSRELA QT++
Sbjct: 220 SGRDIIGIAFTGSGKTLAFCMPLIMLALEEEAKLPFVQGEGPVGIILCPSRELASQTYEN 279
Query: 66 IQYYCAALP----IPLRTC-LAIGGVPMNQSLDVIKKGIQ 100
IQ +C +L P C L IGGV M++ V+ KG+
Sbjct: 280 IQTWCTSLSQSGKYPQLNCLLCIGGVSMSEQSRVLNKGLH 319
>gi|340372344|ref|XP_003384704.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Amphimedon
queenslandica]
Length = 622
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 115/157 (73%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KG+ Y + + T WR P I H+ IR+ IL EG+++PP +F+ MK
Sbjct: 128 SVGELAKGVVYKESLVTGWRPPHYINVASKGRHERIRKKWHILTEGENLPPPIKTFKEMK 187
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P ++ AL+ KGI +PTPIQ+QG+P ALSGRD+IGIAFTGSGKTLVF LPI+MFCLEQE
Sbjct: 188 FPRPILTALKKKGITRPTPIQIQGLPTALSGRDMIGIAFTGSGKTLVFTLPIVMFCLEQE 247
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
KLPF PGEGP+GL+ICPSRELA QT D+++ + + L
Sbjct: 248 KKLPFAPGEGPFGLVICPSRELANQTFDVVKDFTSHL 284
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LPI+MFCLEQE KLPF PGEGP+GL+ICPSRELA QT
Sbjct: 214 TALSGRDMIGIAFTGSGKTLVFTLPIVMFCLEQEKKLPFAPGEGPFGLVICPSRELANQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
D+++ + + L +R L IGGVPM +D +K+G+
Sbjct: 274 FDVVKDFTSHLQAEGYPVVRPLLCIGGVPMKDQIDRLKRGVH 315
>gi|393223045|gb|EJD08529.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 618
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/158 (56%), Positives = 118/158 (74%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY +P+K+SW PR I + P +V+ IR ILVEG+D+PP SF MK+P+
Sbjct: 134 LAKGIQYTEPLKSSWTPPRYIQARPKEVNQRIREQYHILVEGEDIPPPIPSFADMKIPDV 193
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
L++ L++KGI PTPIQ QG+P AL+GRD+IGIAFTGSGKTL F LP++MF E+ETKLP
Sbjct: 194 LLKNLKSKGIVSPTPIQTQGLPVALAGRDMIGIAFTGSGKTLAFCLPLIMFAAEEETKLP 253
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F+ GEGP G+I+CPSRELA QT + + + +AL G +
Sbjct: 254 FVRGEGPVGIILCPSRELASQTFENVLGWTSALASGGY 291
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LP++MF E+ETKLPF+ GEGP G+I+CPSRELA QT + +
Sbjct: 221 RDMIGIAFTGSGKTLAFCLPLIMFAAEEETKLPFVRGEGPVGIILCPSRELASQTFENVL 280
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +AL L T L IGG+ M++ + KG+
Sbjct: 281 GWTSALASGGYPQLNTLLCIGGISMSEQSHTLNKGLH 317
>gi|168049229|ref|XP_001777066.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671509|gb|EDQ58059.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 616
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 119/153 (77%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGI Y +P++T W+ P I +L ++ IRR ILVEGD++PP +F+ M+ P+
Sbjct: 122 LAKGISYTEPMQTGWKPPLAIRNLSEKDCKDIRRQWHILVEGDEIPPPIKNFKDMRFPDP 181
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++ L+AKGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E ++P
Sbjct: 182 ILKKLKAKGITRPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMLALQEEVRMP 241
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+ GEGP+GL++CPSRELARQT+D+++ + A L
Sbjct: 242 LIGGEGPFGLVVCPSRELARQTYDVVEEFTAVL 274
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 75/99 (75%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E ++P + GEGP+GL++CPSRELARQT+D+
Sbjct: 207 SGRDMIGIAFTGSGKTLVFVLPLIMLALQEEVRMPLIGGEGPFGLVVCPSRELARQTYDV 266
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + A L LR+ L IGG+ M L+V+K G+
Sbjct: 267 VEEFTAVLSEKGYPQLRSMLCIGGIDMRSQLEVVKHGVH 305
>gi|428176607|gb|EKX45491.1| hypothetical protein GUITHDRAFT_87080 [Guillardia theta CCMP2712]
Length = 523
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 116/154 (75%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
++Y +P+KT WR PR + ++ D +R+ I+VEG+DVPP F+ M+ P+ +
Sbjct: 86 VKYTEPMKTDWRPPRHLRETTEEERDRLRKKWHIIVEGEDVPPPIKDFKDMRFPKPTLDL 145
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
L+AKGI++PTPIQVQG+P ALSGRD+IGIAFTGSGKTLVF LP++M LEQETK+P G
Sbjct: 146 LKAKGIERPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFSLPMVMIALEQETKMPIARG 205
Query: 219 EGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
EGP+GL I PSRELARQT+++++ +C AL G F
Sbjct: 206 EGPFGLCINPSRELARQTYEVMKEHCDALGFGGF 239
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 82/125 (65%), Gaps = 17/125 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP++M LEQETK+P GEGP+GL I PSRELARQT+++
Sbjct: 167 SGRDMIGIAFTGSGKTLVFSLPMVMIALEQETKMPIARGEGPFGLCINPSRELARQTYEV 226
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
++ +C AL PLR L +GG+ + + DV+ G+ C+++ P +
Sbjct: 227 MKEHCDALGFGGFPPLRCLLCMGGIDLREQGDVLAGGVH-------------CVVATPGR 273
Query: 122 VHDII 126
+ D++
Sbjct: 274 LMDLL 278
>gi|426200365|gb|EKV50289.1| hypothetical protein AGABI2DRAFT_216865 [Agaricus bisporus var.
bisporus H97]
Length = 613
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 112/153 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DP++ SWR PR I + H+ +R ILVEG+DVPP F MK+P+
Sbjct: 129 LAKGIQYTDPLRASWRPPRYIRERTLEEHEKLRDKYHILVEGEDVPPPIEHFEDMKIPDP 188
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++R L++ I PTPIQ+QGIPAA SGRDIIGIAFTGSGKTL F LP++M LE+E KLP
Sbjct: 189 ILRHLKSNRIITPTPIQLQGIPAAFSGRDIIGIAFTGSGKTLAFCLPLIMLALEEEKKLP 248
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT + + +C+AL
Sbjct: 249 FVRGEGPVGVILCPSRELANQTFENVNTWCSAL 281
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIAFTGSGKTL F LP++M LE+E KLPF+ GEGP G+I+CPSRELA QT +
Sbjct: 214 SGRDIIGIAFTGSGKTLAFCLPLIMLALEEEKKLPFVRGEGPVGVILCPSRELANQTFEN 273
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +C+AL L + L +GG+ MN+ V+ KGI
Sbjct: 274 VNTWCSALARDNKYPQLNSLLCMGGIAMNEQSHVLSKGIH 313
>gi|170593039|ref|XP_001901272.1| DEAD [Brugia malayi]
gi|158591339|gb|EDP29952.1| DEAD, putative [Brugia malayi]
Length = 689
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 111/147 (75%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
I KG++Y++ IKTSW PR IL++ D+ H IRR ILV+G++VPP SF MK P
Sbjct: 198 IAKGVRYDESIKTSWHPPRHILAVSDEEHATIRRKKGILVDGENVPPPIGSFIEMKFPPP 257
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++AL K I PT IQ+QGIP ALSGRD+IGIA TGSGKTL F LP++MFCLEQE LP
Sbjct: 258 VIKALRDKKIICPTVIQMQGIPVALSGRDMIGIASTGSGKTLTFALPLIMFCLEQEVSLP 317
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQ 241
F GEGPYGLII PSRELA+Q HD+I+
Sbjct: 318 FRHGEGPYGLIIVPSRELAKQIHDVIE 344
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F LP++MFCLEQE LPF GEGPYGLII PSRELA+Q HD+
Sbjct: 283 SGRDMIGIASTGSGKTLTFALPLIMFCLEQEVSLPFRHGEGPYGLIIVPSRELAKQIHDV 342
Query: 66 IQYY----CAALPIP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ C P LR L IGG+P+++ V ++G+
Sbjct: 343 IEKLFENICDGTKFPRLRVGLCIGGLPISEQARVFERGVH 382
>gi|330793454|ref|XP_003284799.1| hypothetical protein DICPUDRAFT_28243 [Dictyostelium purpureum]
gi|325085293|gb|EGC38703.1| hypothetical protein DICPUDRAFT_28243 [Dictyostelium purpureum]
Length = 558
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 115/156 (73%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
K I Y + +KTSWR P I ++ + IR + I+V+GDD PP +F+ MK+P S++
Sbjct: 62 KDITYTESMKTSWRPPLYIRERDEKDNQKIRNQMNIIVDGDDTPPPITTFKEMKIPRSII 121
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+ L+ KGIKKP+PIQ+QG+P LSGRD+IGIA+TGSGKTLVF LP+++F LE+E KLP +
Sbjct: 122 QVLDKKGIKKPSPIQMQGLPVVLSGRDMIGIAYTGSGKTLVFTLPMVLFALEEEKKLPII 181
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
GEGP+GLI+ PSRELARQT+D++ + +L F
Sbjct: 182 QGEGPFGLILSPSRELARQTYDLVNSFTDSLAKDGF 217
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 72/97 (74%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA+TGSGKTLVF LP+++F LE+E KLP + GEGP+GLI+ PSRELARQT+D++
Sbjct: 147 RDMIGIAYTGSGKTLVFTLPMVLFALEEEKKLPIIQGEGPFGLILSPSRELARQTYDLVN 206
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +L LRT LAIGG+ M + V +KGI
Sbjct: 207 SFTDSLAKDGFPKLRTLLAIGGIDMREQEQVFRKGIH 243
>gi|339241041|ref|XP_003376446.1| ATP-dependent RNA helicase abstrakt [Trichinella spiralis]
gi|316974837|gb|EFV58309.1| ATP-dependent RNA helicase abstrakt [Trichinella spiralis]
Length = 1902
Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/153 (54%), Positives = 113/153 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
I K ++Y + I+T W+ PR + +L + R+ IL EG+++P SFR MK P+S
Sbjct: 1494 IAKDVKYVEAIRTGWQPPRYVENLTYEQIVRFRKLHGILAEGENIPAPLRSFREMKFPKS 1553
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ AL K I PTPIQ+QG+P AL GRD+IGIA+TGSGKTLVFVLP++MFC+EQ+ +LP
Sbjct: 1554 ILSALTKKNITVPTPIQMQGLPIALKGRDMIGIAYTGSGKTLVFVLPLIMFCMEQQIRLP 1613
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGPYGLI+ PSRELA+Q +DI+ YYC AL
Sbjct: 1614 FIDNEGPYGLIVVPSRELAKQIYDIVCYYCEAL 1646
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/97 (59%), Positives = 77/97 (79%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA+TGSGKTLVFVLP++MFC+EQ+ +LPF+ EGPYGLI+ PSRELA+Q +DI+
Sbjct: 1581 RDMIGIAYTGSGKTLVFVLPLIMFCMEQQIRLPFIDNEGPYGLIVVPSRELAKQIYDIVC 1640
Query: 68 YYCAAL---PIP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
YYC AL +P LR CL IGGV +++ L ++G+
Sbjct: 1641 YYCEALYADNLPKLRVCLCIGGVSLSEQLSTARRGVH 1677
>gi|325192108|emb|CCA26569.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
gi|325192439|emb|CCA26875.1| predicted protein putative [Albugo laibachii Nc14]
Length = 648
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 117/156 (75%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
+GIQY PI+T+WRAP+ + + + + IR+ ILV+GDD+PP SF +M+ PE+++
Sbjct: 149 EGIQYTTPIQTTWRAPKAVAEITLEKCESIRKKWHILVDGDDIPPPIKSFEMMRFPEAIL 208
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+AL+AK I +PTPIQVQ +P LSGRD+IGIAFTGSGKT+ F LP++MF LE+E K+P +
Sbjct: 209 KALKAKKINRPTPIQVQALPCILSGRDLIGIAFTGSGKTITFTLPLIMFALEEEMKMPII 268
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
EGP+G+I+ PSREL RQT +++Q++ AL +
Sbjct: 269 GQEGPFGIIVGPSRELMRQTFEVVQHFTEALSAAGY 304
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKT+ F LP++MF LE+E K+P + EGP+G+I+ PSREL RQT ++
Sbjct: 232 SGRDLIGIAFTGSGKTITFTLPLIMFALEEEMKMPIIGQEGPFGIIVGPSRELMRQTFEV 291
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVI-KKGIQ 100
+Q++ AL LR+ L IGG ++I +KG+
Sbjct: 292 VQHFTEALSAAGYPQLRSLLLIGGEDKRTQCELIARKGVH 331
>gi|409082532|gb|EKM82890.1| hypothetical protein AGABI1DRAFT_68941 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 613
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 112/153 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DP++ SWR PR I + H+ +R ILVEG+DVPP F MK+P+
Sbjct: 129 LAKGIQYTDPLRASWRPPRYIRERTLEEHEKLRDKYHILVEGEDVPPPIEHFEDMKIPDP 188
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++ L++ I PTPIQ+QGIPAA SGRDIIGIAFTGSGKTL F LP++M LE+E KLP
Sbjct: 189 ILKHLKSNRIITPTPIQLQGIPAAFSGRDIIGIAFTGSGKTLAFCLPLIMLALEEEKKLP 248
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT + + +C+AL
Sbjct: 249 FVRGEGPVGVILCPSRELANQTFENVNTWCSAL 281
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIAFTGSGKTL F LP++M LE+E KLPF+ GEGP G+I+CPSRELA QT +
Sbjct: 214 SGRDIIGIAFTGSGKTLAFCLPLIMLALEEEKKLPFVRGEGPVGVILCPSRELANQTFEN 273
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +C+AL L + L +GG+ MN+ V+ KGI
Sbjct: 274 VNTWCSALARDNKYPQLNSLLCMGGIAMNEQSHVLSKGIH 313
>gi|328869570|gb|EGG17948.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 631
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
K + Y D IKT WR PR +L + H +R+ L I V G++VPP SF MKLP ++
Sbjct: 138 KDVVYKDSIKTDWRPPRYVLDRGESTHGDLRQALHIHVAGEEVPPPLTSFAEMKLPREII 197
Query: 157 RAL-EAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF 215
R L EAKGIKKPTPIQ+QG+P ALSGRD+IGIAFTGSGKTLVF LP+++ ++ E +LP
Sbjct: 198 RYLKEAKGIKKPTPIQIQGLPVALSGRDMIGIAFTGSGKTLVFALPMVLLAMDAEKRLPI 257
Query: 216 LPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGP+GLIICPSRELARQT+D++ A+
Sbjct: 258 EAGEGPFGLIICPSRELARQTYDLVNALSDAI 289
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVF LP+++ ++ E +LP GEGP+GLIICPSRELARQT+D+
Sbjct: 222 SGRDMIGIAFTGSGKTLVFALPMVLLAMDAEKRLPIEAGEGPFGLIICPSRELARQTYDL 281
Query: 66 IQYYCAALP----IPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ LRT LAIGG+ M + + K+GI
Sbjct: 282 VNALSDAIKKERGFELRTLLAIGGIDMGEQEHLFKRGIH 320
>gi|312082520|ref|XP_003143478.1| ATP-dependent RNA helicase DDX41 [Loa loa]
gi|307761359|gb|EFO20593.1| ATP-dependent RNA helicase DDX41 [Loa loa]
Length = 657
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/147 (61%), Positives = 109/147 (74%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
I +G++Y + IKTSW PR IL++ D+ H +RR ILV+GD VPP SF MK P
Sbjct: 166 IARGVRYEESIKTSWHPPRHILAVSDEEHAAVRRKKGILVDGDSVPPPIGSFIEMKFPPP 225
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++AL K I PT IQ+QGIP ALSGRD+IGIA TGSGKTL F LP++MFCLEQE LP
Sbjct: 226 VIKALRDKKIICPTVIQMQGIPVALSGRDMIGIASTGSGKTLTFALPLVMFCLEQEVSLP 285
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQ 241
F GEGPYGLII PSRELA+Q HD+I+
Sbjct: 286 FRHGEGPYGLIIVPSRELAKQIHDVIE 312
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F LP++MFCLEQE LPF GEGPYGLII PSRELA+Q HD+
Sbjct: 251 SGRDMIGIASTGSGKTLTFALPLVMFCLEQEVSLPFRHGEGPYGLIIVPSRELAKQIHDV 310
Query: 66 IQYY----CAALPIP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ C P LR L IGG+P+++ V ++G+
Sbjct: 311 IEKLFENICDGTKFPRLRVGLCIGGLPISEQARVFERGVH 350
>gi|256087995|ref|XP_002580146.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 679
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 113/146 (77%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY+ PI+TSW P I ++ + IR+N RIL EGDDVPP F M+ P++
Sbjct: 146 LAKGIQYDKPIQTSWVPPVYIQEQSEEKSEEIRKNFRILTEGDDVPPPIRHFSEMRFPKA 205
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
L+ L+ +GI KPTPIQ+QG+PA LSGRD+IGIAFTGSGKT+VF +P+++F ++QE K+P
Sbjct: 206 LIDLLKLRGITKPTPIQMQGLPAVLSGRDMIGIAFTGSGKTMVFSIPVILFSMDQEQKIP 265
Query: 215 FLPGEGPYGLIICPSRELARQTHDII 240
F+ EGPYGL++ PSRELARQTH++I
Sbjct: 266 FIQNEGPYGLVLGPSRELARQTHEVI 291
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 71/98 (72%), Gaps = 6/98 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKT+VF +P+++F ++QE K+PF+ EGPYGL++ PSRELARQTH++
Sbjct: 231 SGRDMIGIAFTGSGKTMVFSIPVILFSMDQEQKIPFIQNEGPYGLVLGPSRELARQTHEV 290
Query: 66 I-----QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
I A P +R CL IGG+ + + D++K+
Sbjct: 291 ICSLIDGLVKAGFP-SIRCCLCIGGMAVKEQADIVKRS 327
>gi|238008396|gb|ACR35233.1| unknown [Zea mays]
gi|413955780|gb|AFW88429.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 618
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 117/154 (75%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
+S+ I KGI Y +PI+T W+ P + +P + RR I+V+GDD+PP FR +
Sbjct: 119 RSVREIAKGIIYTEPIQTGWKPPLRLRRMPLAKANEFRRKWHIIVDGDDIPPPARDFRDL 178
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
+LPE ++R L +GI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++
Sbjct: 179 RLPEPMLRKLRERGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQE 238
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
E+ +P +PGEGP+G+IICPSRELA+QT+D+I+ +
Sbjct: 239 ESLMPIVPGEGPFGMIICPSRELAKQTYDVIEQF 272
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E+ +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 209 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEESLMPIVPGEGPFGMIICPSRELAKQTYDV 268
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P +R L IGGV M LDV+KKG+
Sbjct: 269 IEQFLIPLKEAGYP-EIRHLLCIGGVDMRTQLDVLKKGVH 307
>gi|226502378|ref|NP_001147853.1| ATP-dependent RNA helicase DDX41 [Zea mays]
gi|195614138|gb|ACG28899.1| ATP-dependent RNA helicase DDX41 [Zea mays]
Length = 616
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 117/154 (75%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
+S+ I KGI Y +PI+T W+ P + +P + RR I+V+GDD+PP FR +
Sbjct: 117 RSVREIAKGIIYTEPIQTGWKPPLRLRRMPLAKANEFRRKWHIIVDGDDIPPPARDFRDL 176
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
+LPE ++R L +GI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++
Sbjct: 177 RLPEPMLRKLRERGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQE 236
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
E+ +P +PGEGP+G+IICPSRELA+QT+D+I+ +
Sbjct: 237 ESLMPIVPGEGPFGMIICPSRELAKQTYDVIEQF 270
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 76/100 (76%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E+ +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 207 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEESLMPIVPGEGPFGMIICPSRELAKQTYDV 266
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P +R L IGGV M LDV+KKG+
Sbjct: 267 IEQFLIPLKEAGYP-EIRHLLCIGGVDMRTQLDVLKKGVH 305
>gi|409046310|gb|EKM55790.1| hypothetical protein PHACADRAFT_161837 [Phanerochaete carnosa
HHB-10118-sp]
Length = 623
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 116/158 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG+QY + +KT+WR P+ + ++ H +R I+VEG+D+PP +F MK+PE
Sbjct: 139 LAKGVQYTESLKTAWRPPKFVRERTEEAHRRLREKYHIIVEGEDIPPPIENFTDMKVPEP 198
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
LV+ L++K I KPTPIQ+QGIP A SGRD+IGIAFTGSGKTL F LP++MF LE+E+KL
Sbjct: 199 LVKFLKSKRITKPTPIQLQGIPIAFSGRDMIGIAFTGSGKTLAFCLPLIMFALEEESKLS 258
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F+ GEGP G+I+CPSRELA QT++ + + AL G +
Sbjct: 259 FVRGEGPVGVILCPSRELATQTYENVLTWTDALAKGGY 296
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP++MF LE+E+KL F+ GEGP G+I+CPSRELA QT++
Sbjct: 224 SGRDMIGIAFTGSGKTLAFCLPLIMFALEEESKLSFVRGEGPVGVILCPSRELATQTYEN 283
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + AL L T L IGG+ M V+ KG+
Sbjct: 284 VLTWTDALAKGGYPHLSTLLCIGGISMGDQSHVLSKGLH 322
>gi|357138723|ref|XP_003570939.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35A-like
[Brachypodium distachyon]
Length = 613
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 116/162 (71%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P + +P D +RR ILVEGD+VPP F+ ++
Sbjct: 116 SVRELAKGITYTEPLLTGWKPPLRLRRMPRTKADELRRKWHILVEGDEVPPPARQFQDLR 175
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
PE ++R L KGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 176 FPEPILRMLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEE 235
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+P + GEGP+G+IICPSRELA+QT+D+I+ + A L F
Sbjct: 236 MMMPIVAGEGPFGMIICPSRELAKQTYDVIEMFLAPLKQAGF 277
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P + GEGP+G+IICPSRELA+QT+D+
Sbjct: 205 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVAGEGPFGMIICPSRELAKQTYDV 264
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A L +R L IGG+ M LDV+K+G+
Sbjct: 265 IEMFLAPLKQAGFPEIRPLLCIGGIDMRTQLDVVKRGVH 303
>gi|449436164|ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
sativus]
Length = 597
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 132/192 (68%), Gaps = 14/192 (7%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
+ P+ ++ +Q ++I++ R L S+ + KGI Y +P+ T W+
Sbjct: 74 VSPTEQIVQQEKEMIEHLSD------RKTL--------MSVRELAKGITYTEPLLTGWKP 119
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P I +P + D+IR+ I+V+GD++PP +F+ M+LPE +++ L+ KGI +PTPIQ
Sbjct: 120 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 179
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
VQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E +P + GEGP+GLIICPSRE
Sbjct: 180 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 239
Query: 232 LARQTHDIIQYY 243
LARQT+++++ +
Sbjct: 240 LARQTYEVVEQF 251
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 74/100 (74%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P + GEGP+GLIICPSRELARQT+++
Sbjct: 188 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 247
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + A P LR L IGGV M ++V+KKG+
Sbjct: 248 VEQFLIPMKEAGYP-ELRPLLCIGGVDMRSQIEVVKKGVH 286
>gi|449509297|ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
sativus]
Length = 597
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 132/192 (68%), Gaps = 14/192 (7%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
+ P+ ++ +Q ++I++ R L S+ + KGI Y +P+ T W+
Sbjct: 74 VSPTEQIVQQEKEMIEHLSD------RKTL--------MSVRELAKGITYTEPLLTGWKP 119
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P I +P + D+IR+ I+V+GD++PP +F+ M+LPE +++ L+ KGI +PTPIQ
Sbjct: 120 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 179
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
VQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E +P + GEGP+GLIICPSRE
Sbjct: 180 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 239
Query: 232 LARQTHDIIQYY 243
LARQT+++++ +
Sbjct: 240 LARQTYEVVEQF 251
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 74/100 (74%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P + GEGP+GLIICPSRELARQT+++
Sbjct: 188 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 247
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + A P LR L IGGV M ++V+KKG+
Sbjct: 248 VEQFLIPMKEAGYP-ELRPLLCIGGVDMRSQIEVVKKGVH 286
>gi|302692416|ref|XP_003035887.1| hypothetical protein SCHCODRAFT_65679 [Schizophyllum commune H4-8]
gi|300109583|gb|EFJ00985.1| hypothetical protein SCHCODRAFT_65679 [Schizophyllum commune H4-8]
Length = 620
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 112/153 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY +P+K+SWR P I ++ ++ +R+ ILVEG D+PP F MK+P
Sbjct: 134 LAKGIQYTEPLKSSWRPPHYIRGRTEEENERVRQKHHILVEGKDIPPPVEHFEDMKIPRG 193
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L++K I PTPIQ+QGIP A SGRDIIGIAFTGSGKTL F LP++MF LE+E KLP
Sbjct: 194 ILDYLKSKRIIDPTPIQIQGIPTAFSGRDIIGIAFTGSGKTLAFCLPLIMFALEEEMKLP 253
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT++ + +C AL
Sbjct: 254 FVRGEGPVGVILCPSRELANQTYENVLAWCEAL 286
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIAFTGSGKTL F LP++MF LE+E KLPF+ GEGP G+I+CPSRELA QT++
Sbjct: 219 SGRDIIGIAFTGSGKTLAFCLPLIMFALEEEMKLPFVRGEGPVGVILCPSRELANQTYEN 278
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +C AL L T L IGG+ MN V+ KGI
Sbjct: 279 VLAWCEALAKEGRYPQLNTLLCIGGISMNDQAHVMSKGIH 318
>gi|242035801|ref|XP_002465295.1| hypothetical protein SORBIDRAFT_01g035760 [Sorghum bicolor]
gi|241919149|gb|EER92293.1| hypothetical protein SORBIDRAFT_01g035760 [Sorghum bicolor]
Length = 618
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 116/154 (75%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
+S+ I KGI Y D I+T W+ P + +P + +RR I+V+GDDVPP FR +
Sbjct: 119 RSVREIAKGIIYTDSIQTGWKPPLRLRRMPLAKANELRRKWHIIVDGDDVPPPARDFRDL 178
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
+LPE ++R L +GI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M +++
Sbjct: 179 RLPEPMLRKLRERGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVAVQE 238
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
E +P +PGEGP+G+IICPSRELA+QT+D+I+ +
Sbjct: 239 EILMPIVPGEGPFGMIICPSRELAKQTYDVIEQF 272
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 75/100 (75%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M +++E +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 209 SGRDMIGIAFTGSGKTLVFVLPLIMVAVQEEILMPIVPGEGPFGMIICPSRELAKQTYDV 268
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P +R L IGGV M LDV+KKG+
Sbjct: 269 IEQFLIPLKEAGYP-EIRPLLCIGGVDMRTQLDVLKKGVH 307
>gi|392575235|gb|EIW68369.1| hypothetical protein TREMEDRAFT_32503 [Tremella mesenterica DSM
1558]
Length = 619
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 110/153 (71%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
I +G + D +KT+WRAP I ++ + H+ +R I+ EGDD+PP +F MK+P+
Sbjct: 135 ISQGTVWTDSLKTTWRAPWFIRNMSQEEHEAVRDKYHIICEGDDLPPPVQNFVDMKIPKP 194
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L KGIKKPTPIQ+QG+P A SGRD+IGIAFTGSGKTL F LP +M LE E +LP
Sbjct: 195 ILDYLLNKGIKKPTPIQIQGLPTAFSGRDMIGIAFTGSGKTLTFTLPAIMLALEAEMRLP 254
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP GLIICPSRELARQT++ Q C AL
Sbjct: 255 FVRGEGPVGLIICPSRELARQTYEGCQAMCKAL 287
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP +M LE E +LPF+ GEGP GLIICPSRELARQT++
Sbjct: 220 SGRDMIGIAFTGSGKTLTFTLPAIMLALEAEMRLPFVRGEGPVGLIICPSRELARQTYEG 279
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C AL LR+ L IGG+ M DV+ +G+
Sbjct: 280 CQAMCKALSDSGDYPELRSLLCIGGISMADQADVLNRGVH 319
>gi|195614644|gb|ACG29152.1| ATP-dependent RNA helicase DDX41 [Zea mays]
Length = 618
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 116/154 (75%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
+S+ I KGI Y +PI+T W+ P + +P + RR I+V+GDD+PP FR +
Sbjct: 119 RSVREIAKGIIYTEPIQTGWKPPLRLRRMPLAKANEFRRKWHIIVDGDDIPPPARDFRDL 178
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
+LPE ++R L +GI +PTPIQVQG+P LSGRD+IGIAFT SGKTLVFVLP++M L++
Sbjct: 179 RLPEPMLRKLRERGIVQPTPIQVQGLPVVLSGRDMIGIAFTRSGKTLVFVLPLIMVALQE 238
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
E+ +P +PGEGP+G+IICPSRELA+QT+D+I+ +
Sbjct: 239 ESLMPIVPGEGPFGMIICPSRELAKQTYDVIEQF 272
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 75/100 (75%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFT SGKTLVFVLP++M L++E+ +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 209 SGRDMIGIAFTRSGKTLVFVLPLIMVALQEESLMPIVPGEGPFGMIICPSRELAKQTYDV 268
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P +R L IGGV M LDV+KKG+
Sbjct: 269 IEQFLIPLKEAGYP-EIRHLLCIGGVDMRTQLDVLKKGVH 307
>gi|156406955|ref|XP_001641310.1| predicted protein [Nematostella vectensis]
gi|156228448|gb|EDO49247.1| predicted protein [Nematostella vectensis]
Length = 487
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/146 (58%), Positives = 106/146 (72%)
Query: 107 TSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKK 166
SW PR IL +P + + IR+ ILVEGDD+PP +F+ MK P ++ AL+ KGI
Sbjct: 10 ASWTPPRYILHMPKEKIERIRKKWHILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITH 69
Query: 167 PTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLII 226
PTPIQVQG+PA L+GRD+IGIAFTGSGKTLVF LPI+MF LEQE +PF EGPYG+I+
Sbjct: 70 PTPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIV 129
Query: 227 CPSRELARQTHDIIQYYCAALPIGSF 252
PSRELARQT ++I ++ AL F
Sbjct: 130 VPSRELARQTFEVITHFSRALEAHGF 155
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF LPI+MF LEQE +PF EGPYG+I+ PSRELARQT ++I
Sbjct: 85 RDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVIT 144
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ AL LRT L IGG + + D +K+G+
Sbjct: 145 HFSRALEAHGFPSLRTNLCIGGSSIKEQSDAMKRGVH 181
>gi|393236526|gb|EJD44074.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 609
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 112/158 (70%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGI Y +P KTSWR PR I + H +R I+V+GDDVPP F MK+PE
Sbjct: 124 LAKGITYTEPFKTSWRPPRHIRERTEDQHRKLREKHHIIVDGDDVPPPIARFLDMKIPEV 183
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+V+ ++K I PTPIQ+QG+P A +GRD+IGIAFTGSGKTL F LP++M LE+E+K+P
Sbjct: 184 IVKHFKSKRIVDPTPIQIQGLPTAFAGRDMIGIAFTGSGKTLAFCLPLIMRALEEESKMP 243
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F+ GEGP G+I+CPSRELA QT++ + + +AL G +
Sbjct: 244 FVRGEGPVGIILCPSRELATQTYENVLDWSSALSRGGY 281
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LP++M LE+E+K+PF+ GEGP G+I+CPSRELA QT++ +
Sbjct: 211 RDMIGIAFTGSGKTLAFCLPLIMRALEEESKMPFVRGEGPVGIILCPSRELATQTYENVL 270
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +AL PL T L IGG+ M++ V+ KGI
Sbjct: 271 DWSSALSRGGYPPLNTLLCIGGISMSEQGHVLNKGIH 307
>gi|328767309|gb|EGF77359.1| hypothetical protein BATDEDRAFT_91848 [Batrachochytrium
dendrobatidis JAM81]
Length = 630
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y + ++TSW PR I + + H+ R+ IL EG D+PP +FR M++P ++V
Sbjct: 137 IKYTESMRTSWTPPRHIRDISAKEHESTRKEFHILSEGLDLPPPIKTFREMRIPSAIVSY 196
Query: 159 LE-AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
L+ KGI KPTPIQVQG+P A SGRD+IGIAFTGSGKTLVF+LP++M LE ET+LP++
Sbjct: 197 LKNTKGIVKPTPIQVQGLPTAFSGRDMIGIAFTGSGKTLVFILPLVMLALEAETRLPWIQ 256
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
GEGP GLI+CPSRELARQT+D + C AL +
Sbjct: 257 GEGPVGLILCPSRELARQTYDFTKELCEALEQSGY 291
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 17/126 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF+LP++M LE ET+LP++ GEGP GLI+CPSRELARQT+D +
Sbjct: 221 RDMIGIAFTGSGKTLVFILPLVMLALEAETRLPWIQGEGPVGLILCPSRELARQTYDFTK 280
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
C AL +R L +GG+ M + V++ G +++ P ++
Sbjct: 281 ELCEALEQSGYPSIRVLLCMGGISMAEQGSVLRAGAH-------------IVVATPGRLQ 327
Query: 124 DIIRRN 129
D++ +N
Sbjct: 328 DMLEKN 333
>gi|356505847|ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Glycine
max]
Length = 587
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 117/153 (76%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P + + + D+IR+ I+V+G D+PP +F+ M+
Sbjct: 89 SVRELAKGITYTEPLPTGWKPPLHVRRMSKKECDLIRKQWHIIVDGGDIPPPIKNFKDMR 148
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
PE +++ L+AKGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M +++E
Sbjct: 149 FPEPVLKKLKAKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEE 208
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
+P +PGEGP+GLIICPSRELARQT+++I+ +
Sbjct: 209 IMMPIVPGEGPFGLIICPSRELARQTYEVIEQF 241
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 75/100 (75%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M +++E +P +PGEGP+GLIICPSRELARQT+++
Sbjct: 178 SGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEV 237
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P LR L IGGV M LD++KKG+
Sbjct: 238 IEQFLIPLKEAGYP-ELRPLLCIGGVDMRSQLDIVKKGVH 276
>gi|302801267|ref|XP_002982390.1| hypothetical protein SELMODRAFT_116186 [Selaginella moellendorffii]
gi|300149982|gb|EFJ16635.1| hypothetical protein SELMODRAFT_116186 [Selaginella moellendorffii]
Length = 577
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 13/194 (6%)
Query: 54 PSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPR 113
PS EL RQ D++ + L P+++ I KGI+Y +P+ T W P
Sbjct: 65 PSEELQRQEKDMLDRLNDEKRMLL---------PVSE----ISKGIKYTEPMHTGWTPPS 111
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ + + IR L ILVEG+DVPP SF+ M LP+S++R L+ KG+K PTPIQVQ
Sbjct: 112 HVSEMGAVEIEAIRNKLHILVEGEDVPPPIRSFKDMGLPKSVLRKLKEKGVKHPTPIQVQ 171
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
G+PA LSGRD+IG+AFTGSGKTL FVLP++M LE+E K GEGP GLI+CPSRELA
Sbjct: 172 GLPAILSGRDMIGVAFTGSGKTLAFVLPLIMLALEEEEKSRLKGGEGPVGLILCPSRELA 231
Query: 234 RQTHDIIQYYCAAL 247
+QT D+I+ + + +
Sbjct: 232 KQTLDVIEEFVSVV 245
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+AFTGSGKTL FVLP++M LE+E K GEGP GLI+CPSRELA+QT D+
Sbjct: 178 SGRDMIGVAFTGSGKTLAFVLPLIMLALEEEEKSRLKGGEGPVGLILCPSRELAKQTLDV 237
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + + LR L IGG M L+ I++G+
Sbjct: 238 IEEFVSVVNSSRCCHLRAMLCIGGTDMRSQLEAIRRGVH 276
>gi|353240517|emb|CCA72383.1| probable DEAD-box ATP-dependent RNA helicase 35 [Piriformospora
indica DSM 11827]
Length = 616
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 111/153 (72%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY + +KTSWR P+ I ++ + IR ILVEG+DVPP +F MK+P +
Sbjct: 132 LAKGIQYTESLKTSWRPPKHIRERTEEENARIREKYHILVEGEDVPPPIETFAEMKIPPA 191
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++ L++ I PTPIQ+QGIP A SGRD+IGIAFTGSGKTL F +P +M LE E +LP
Sbjct: 192 ILKHLKSNRINSPTPIQLQGIPTAFSGRDMIGIAFTGSGKTLAFCIPAIMMALEAEARLP 251
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT + IQ +C+AL
Sbjct: 252 FIRGEGPIGVILCPSRELANQTFENIQAWCSAL 284
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTL F +P +M LE E +LPF+ GEGP G+I+CPSRELA QT
Sbjct: 214 TAFSGRDMIGIAFTGSGKTLAFCIPAIMMALEAEARLPFIRGEGPIGVILCPSRELANQT 273
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ IQ +C+AL LRT L IGG+ M+ + +GI
Sbjct: 274 FENIQAWCSALEKDGYPRLRTLLCIGGISMSDQGHTLSQGIH 315
>gi|389749353|gb|EIM90530.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 620
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 112/153 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ +G+QY +P+KTSWR P I + D+ IR +I+VEG D+PP SF MKLPE
Sbjct: 135 LAQGVQYTEPLKTSWRPPHYIRNRSDEEQAKIREKHQIIVEGQDIPPPIPSFADMKLPEP 194
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
L++ L++K I PTPIQ+QG+P A SGRD+IGIAFTGSGKTL F +PI+M LE+E+KL
Sbjct: 195 LLKFLKSKRITTPTPIQIQGLPVAFSGRDMIGIAFTGSGKTLAFCIPIIMLALEEESKLA 254
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT++ I + AL
Sbjct: 255 FVRGEGPVGVILCPSRELASQTYENIVQWTEAL 287
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F +PI+M LE+E+KL F+ GEGP G+I+CPSRELA QT++
Sbjct: 220 SGRDMIGIAFTGSGKTLAFCIPIIMLALEEESKLAFVRGEGPVGVILCPSRELASQTYEN 279
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
I + AL L T L +GG+ M + V+ KG+
Sbjct: 280 IVQWTEALSSTGQYPRLNTLLCMGGISMGEQSHVLNKGLH 319
>gi|302766257|ref|XP_002966549.1| hypothetical protein SELMODRAFT_230807 [Selaginella moellendorffii]
gi|300165969|gb|EFJ32576.1| hypothetical protein SELMODRAFT_230807 [Selaginella moellendorffii]
Length = 581
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 13/194 (6%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
+ PS EL RQ D++ + L P+++ I KGI+Y +P+ T W
Sbjct: 64 LSPSEELQRQEKDMLDRLNDEKRVLL---------PVSE----ISKGIKYTEPMHTGWTP 110
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + + + IR L ILVEG+DVPP SF+ M LP+S++R L+ KG+K PTPIQ
Sbjct: 111 PLHVSEMSAVEIEAIRNKLHILVEGEDVPPPIRSFKDMGLPKSVLRKLKEKGVKHPTPIQ 170
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
VQG+PA LSGRD+IG+AFTGSGKTL FVLP++M L++E + GEGP GLI+CPSRE
Sbjct: 171 VQGLPAILSGRDMIGVAFTGSGKTLAFVLPLIMLALKEEERSRLKGGEGPVGLILCPSRE 230
Query: 232 LARQTHDIIQYYCA 245
LA+QT D+I+ + +
Sbjct: 231 LAKQTFDVIEEFVS 244
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+AFTGSGKTL FVLP++M L++E + GEGP GLI+CPSRELA+QT D+
Sbjct: 179 SGRDMIGVAFTGSGKTLAFVLPLIMLALKEEERSRLKGGEGPVGLILCPSRELAKQTFDV 238
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + + LR L IGG M L+ I++G+
Sbjct: 239 IEEFVSMVNSSRCCHLRAMLCIGGTGMRSQLEAIRRGVH 277
>gi|359482396|ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
vinifera]
gi|147861063|emb|CAN78736.1| hypothetical protein VITISV_003102 [Vitis vinifera]
gi|297743544|emb|CBI36411.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 131/192 (68%), Gaps = 14/192 (7%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
I P+ ++ +Q ++I++ R L S+ + KGI Y +P+ T W+
Sbjct: 64 ISPAEQIVQQEKEMIEHLSD------RKTL--------MSVRELAKGITYTEPLLTGWKP 109
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P I + + + IR+ I+V+GD++PP +F+ M+ PE +++ L+AKGI +PTPIQ
Sbjct: 110 PLPIRRMSRKECESIRKQWHIIVDGDEIPPPIKNFKDMRFPEPILKNLKAKGIVQPTPIQ 169
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
VQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+GL+ICPSRE
Sbjct: 170 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICPSRE 229
Query: 232 LARQTHDIIQYY 243
LARQT+++++ +
Sbjct: 230 LARQTYEVVEQF 241
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 76/103 (73%), Gaps = 12/103 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+GL+ICPSRELARQT+++
Sbjct: 178 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICPSRELARQTYEV 237
Query: 66 IQYYCAALPIPLRTC--------LAIGGVPMNQSLDVIKKGIQ 100
++ + +P+R C L IGGV M L+V+KKG+
Sbjct: 238 VEQFL----VPMRECGYPELRPLLCIGGVDMRSQLEVVKKGVH 276
>gi|343425474|emb|CBQ69009.1| probable DEAD-box ATP-dependent RNA helicase 35 [Sporisorium
reilianum SRZ2]
Length = 656
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 112/159 (70%), Gaps = 1/159 (0%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY +P+ TSWRAP I S + +D IR IL +G DVPP +FR MK+PE
Sbjct: 171 LAKGIQYTEPLTTSWRAPSYIRSRTQEENDKIREKNHILADGVDVPPVITNFRDMKVPEC 230
Query: 155 LVRALEA-KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
++ L+ K I KP+PIQ+QG+P A +GRD+IGIAFTGSGKTL F LPI+M E+E +L
Sbjct: 231 VIDYLKTQKKIVKPSPIQMQGLPTAFAGRDMIGIAFTGSGKTLAFSLPIIMLAAEEERRL 290
Query: 214 PFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
PF+ GEGP G+I+CPSRELARQT + I+ AL G +
Sbjct: 291 PFVRGEGPVGMIVCPSRELARQTFESIKGIAEALVHGGY 329
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LPI+M E+E +LPF+ GEGP G+I+CPSRELARQT + I+
Sbjct: 259 RDMIGIAFTGSGKTLAFSLPIIMLAAEEERRLPFVRGEGPVGMIVCPSRELARQTFESIK 318
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
AL + L IGG+ M + + KG
Sbjct: 319 GIAEALVHGGYPHIGVLLCIGGISMAEQHHTMSKGFH 355
>gi|336363645|gb|EGN92023.1| hypothetical protein SERLA73DRAFT_173192 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380499|gb|EGO21652.1| hypothetical protein SERLADRAFT_451670 [Serpula lacrymans var.
lacrymans S7.9]
Length = 618
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 112/153 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY + +KTSWR P+ IL D+ H +R I+V+G+D+PP F MK+P+
Sbjct: 133 LAKGIQYAESLKTSWRPPKYILDRSDEQHRKLREKYHIIVDGEDIPPPIEHFVDMKIPDP 192
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++R L++ I PTPIQ+QGIP A SGRD+IGIAFTGSGKTL F LP++M LE+ETKL
Sbjct: 193 MLRFLKSNKIVTPTPIQLQGIPTAFSGRDMIGIAFTGSGKTLAFCLPLIMLALEEETKLS 252
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT++ + + AA+
Sbjct: 253 FVRGEGPVGVILCPSRELATQTYENMLTWTAAI 285
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP++M LE+ETKL F+ GEGP G+I+CPSRELA QT++
Sbjct: 218 SGRDMIGIAFTGSGKTLAFCLPLIMLALEEETKLSFVRGEGPVGVILCPSRELATQTYEN 277
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + AA+ L T L IGG+ M + V+ KG+
Sbjct: 278 MLTWTAAIAKEGKYPRLNTLLCIGGISMGEQSHVLNKGLH 317
>gi|297841061|ref|XP_002888412.1| hypothetical protein ARALYDRAFT_315588 [Arabidopsis lyrata subsp.
lyrata]
gi|297334253|gb|EFH64671.1| hypothetical protein ARALYDRAFT_315588 [Arabidopsis lyrata subsp.
lyrata]
Length = 587
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 114/157 (72%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P I + ++ D+IR+ I+V GDD+PP +F+ MK
Sbjct: 89 SVRELAKGITYTEPLLTGWKPPLHIRRMSNKQRDLIRKQWHIIVNGDDIPPPIKNFKDMK 148
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P ++ L+ KGI +PTPIQVQG+P L+GRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 149 FPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEE 208
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+P GEGP GLI+CPSRELARQT+++++ + A L
Sbjct: 209 MMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPL 245
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLP++M L++E +P GEGP GLI+CPSRELARQT+++++
Sbjct: 180 RDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVE 239
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A L PLR+ L IGG+ M L+V+K+G+
Sbjct: 240 QFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVH 276
>gi|403419684|emb|CCM06384.1| predicted protein [Fibroporia radiculosa]
Length = 618
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 115/153 (75%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG+QY + +KT+WR P+ I ++ H ++R ILV+G+D+PP +F MK+P+
Sbjct: 133 LAKGVQYTESMKTTWRPPKFIRDRSEEEHRLLREKYHILVDGEDIPPPIDNFTDMKVPDI 192
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
LV+ L++K I PTPIQ+QGIP A +GRD+IGIAFTGSGKTL F LP++M LE+E+KLP
Sbjct: 193 LVKFLKSKRIFTPTPIQLQGIPTACAGRDMIGIAFTGSGKTLAFCLPVIMLALEEESKLP 252
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT++ + + +AL
Sbjct: 253 FVRGEGPVGVILCPSRELATQTYENVLTWTSAL 285
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 68/98 (69%), Gaps = 5/98 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LP++M LE+E+KLPF+ GEGP G+I+CPSRELA QT++ +
Sbjct: 220 RDMIGIAFTGSGKTLAFCLPVIMLALEEESKLPFVRGEGPVGVILCPSRELATQTYENVL 279
Query: 68 YYCAALPI-----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +AL L L IGG+ M+ V+ KG+
Sbjct: 280 TWTSALSKEGRYPSLNVLLCIGGISMSDQSHVMNKGLH 317
>gi|297792439|ref|XP_002864104.1| hypothetical protein ARALYDRAFT_918160 [Arabidopsis lyrata subsp.
lyrata]
gi|297309939|gb|EFH40363.1| hypothetical protein ARALYDRAFT_918160 [Arabidopsis lyrata subsp.
lyrata]
Length = 587
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 114/157 (72%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P I + ++ D+IR+ I+V GDD+PP +F+ MK
Sbjct: 89 SVRELAKGITYTEPLLTGWKPPLHIRRMSNKQRDLIRKQWHIIVNGDDIPPPIKNFKDMK 148
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P ++ L+ KGI +PTPIQVQG+P L+GRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 149 FPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEE 208
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+P GEGP GLI+CPSRELARQT+++++ + A L
Sbjct: 209 MMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPL 245
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLP++M L++E +P GEGP GLI+CPSRELARQT+++++
Sbjct: 180 RDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVE 239
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A L PLR+ L IGG+ M L+V+K+G+
Sbjct: 240 QFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVH 276
>gi|356571471|ref|XP_003553900.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform 1
[Glycine max]
gi|356571473|ref|XP_003553901.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform 2
[Glycine max]
Length = 588
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 115/153 (75%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P + + + D+IR+ I+ +G D+PP +F+ M+
Sbjct: 90 SVRELAKGITYTEPLPTGWKPPLHVRRMSKKECDLIRKQWHIIADGGDIPPPIKNFKDMR 149
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
PE +++ L+AKGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M +++E
Sbjct: 150 FPEPVLKKLKAKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMVAMQEE 209
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
+P +PGEGP+GLIICPSRELARQT ++I+ +
Sbjct: 210 IMMPIVPGEGPFGLIICPSRELARQTFEVIEQF 242
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 74/100 (74%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M +++E +P +PGEGP+GLIICPSRELARQT ++
Sbjct: 179 SGRDMIGIAFTGSGKTLVFVLPMIMVAMQEEIMMPIVPGEGPFGLIICPSRELARQTFEV 238
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P LR L IGGV M LD++KKG+
Sbjct: 239 IEQFLIPLKEAGYP-ELRPLLCIGGVDMRSQLDIVKKGVH 277
>gi|392567512|gb|EIW60687.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 619
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 111/153 (72%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG+ Y +P+K+SWR P+ + ++ + IR IL+EGDD+PP +F MK+PE
Sbjct: 134 LAKGVSYTEPLKSSWRPPKFVRDRTEEENMRIREQHHILIEGDDLPPPIDNFTDMKVPEP 193
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
LV+ L+ K I KPTPIQ+QGIP A SGRD+IGIAFTGSGKTL F LP++M LE+E +LP
Sbjct: 194 LVKFLKTKRITKPTPIQLQGIPTAFSGRDMIGIAFTGSGKTLAFCLPLIMLALEEEARLP 253
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGP G+I+CPSRELA QT++ I + AAL
Sbjct: 254 LSRGEGPVGVILCPSRELATQTYENILVWTAAL 286
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTL F LP++M LE+E +LP GEGP G+I+CPSRELA QT
Sbjct: 216 TAFSGRDMIGIAFTGSGKTLAFCLPLIMLALEEEARLPLSRGEGPVGVILCPSRELATQT 275
Query: 63 HDIIQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
++ I + AAL L T L IGG+ M++ V KGI
Sbjct: 276 YENILVWTAALAKDGRYPQLNTLLCIGGISMSEQSHVFNKGIH 318
>gi|15241415|ref|NP_199941.1| DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis thaliana]
gi|75335491|sp|Q9LU46.1|RH35_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 35
gi|8843865|dbj|BAA97391.1| DEAD-box protein abstrakt [Arabidopsis thaliana]
gi|110740861|dbj|BAE98527.1| DEAD-box protein abstrakt [Arabidopsis thaliana]
gi|332008678|gb|AED96061.1| DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis thaliana]
Length = 591
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 113/157 (71%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P I + + D+IR+ I+V GDD+PP +F+ MK
Sbjct: 93 SVRELAKGITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMK 152
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P ++ L+ KGI +PTPIQVQG+P L+GRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 153 FPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEE 212
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+P GEGP GLI+CPSRELARQT+++++ + A L
Sbjct: 213 MMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPL 249
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLP++M L++E +P GEGP GLI+CPSRELARQT+++++
Sbjct: 184 RDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVE 243
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A L PLR+ L IGG+ M L+V+K+G+
Sbjct: 244 QFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVH 280
>gi|405121875|gb|AFR96643.1| DEAD-box protein abstrakt [Cryptococcus neoformans var. grubii H99]
Length = 615
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 109/153 (71%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ +G+ + + +KTSWRAP I + + +R I+VEG+D+PP F MK+P+
Sbjct: 131 LAQGVTWTESLKTSWRAPHYIRNKTEDEQQAVRDKYHIIVEGEDIPPPIPHFADMKIPKP 190
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L+AKGIK PTPIQ+QG+P A SGRD+IGIAFTGSGKTL F+LP +M LE E K+P
Sbjct: 191 ILSYLQAKGIKSPTPIQMQGLPTAFSGRDMIGIAFTGSGKTLAFILPAIMTALEMEAKVP 250
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP GLIICPSRELARQT++ CA L
Sbjct: 251 FVRGEGPVGLIICPSRELARQTYEQCVAMCAVL 283
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F+LP +M LE E K+PF+ GEGP GLIICPSRELARQT++
Sbjct: 216 SGRDMIGIAFTGSGKTLAFILPAIMTALEMEAKVPFVRGEGPVGLIICPSRELARQTYEQ 275
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
CA L LR+ L IGG+ M DV+ KG+
Sbjct: 276 CVAMCAVLKESGNYPELRSLLCIGGISMADQADVLNKGVH 315
>gi|302818865|ref|XP_002991105.1| hypothetical protein SELMODRAFT_132834 [Selaginella moellendorffii]
gi|300141199|gb|EFJ07913.1| hypothetical protein SELMODRAFT_132834 [Selaginella moellendorffii]
Length = 601
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 124/196 (63%), Gaps = 14/196 (7%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
I + +L RQ D+I + R L S+ + KGI Y +P++T WR
Sbjct: 78 ISATEQLVRQEKDMIDR------LSERKTLM--------SVRELAKGITYTNPMQTDWRP 123
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + + + D IR+ ILVEG+++PP +F+ M+ P+ ++R L+ K I +PTPIQ
Sbjct: 124 PSHVRHMSEAECDEIRKQWHILVEGEEIPPPIKNFKDMRFPDPILRKLKEKSITRPTPIQ 183
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
VQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E GEGP+GL++CPSRE
Sbjct: 184 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMLALQEEQSSSLGGGEGPFGLVVCPSRE 243
Query: 232 LARQTHDIIQYYCAAL 247
LARQT D++Q + L
Sbjct: 244 LARQTFDVVQEFTNVL 259
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E GEGP+GL++CPSRELARQT D+
Sbjct: 192 SGRDMIGIAFTGSGKTLVFVLPLIMLALQEEQSSSLGGGEGPFGLVVCPSRELARQTFDV 251
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+Q + L LR+ L IGG+ M L+V+KKG+
Sbjct: 252 VQEFTNVLREKNYPELRSMLCIGGIDMRSQLEVVKKGVH 290
>gi|302819961|ref|XP_002991649.1| hypothetical protein SELMODRAFT_236355 [Selaginella moellendorffii]
gi|300140498|gb|EFJ07220.1| hypothetical protein SELMODRAFT_236355 [Selaginella moellendorffii]
Length = 585
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 123/196 (62%), Gaps = 14/196 (7%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
I + +L RQ D+I R L S+ + KGI Y +P++T WR
Sbjct: 62 ISVTEQLVRQEKDMIDRLSE------RKTLM--------SVRELAKGITYTNPMQTDWRP 107
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + + + D IR+ ILVEG+++PP +F+ M+ P+ ++R L+ K I +PTPIQ
Sbjct: 108 PSHVRHMSEAECDEIRKQWHILVEGEEIPPPIKNFKDMRFPDPILRKLKEKSITRPTPIQ 167
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
VQG+P LSGRD+IGIAFTGSGKTLVFVLP++M L++E GEGP+GL++CPSRE
Sbjct: 168 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMLALQEEQSSSLGSGEGPFGLVVCPSRE 227
Query: 232 LARQTHDIIQYYCAAL 247
LARQT D++Q + L
Sbjct: 228 LARQTFDVVQEFTNVL 243
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E GEGP+GL++CPSRELARQT D+
Sbjct: 176 SGRDMIGIAFTGSGKTLVFVLPLIMLALQEEQSSSLGSGEGPFGLVVCPSRELARQTFDV 235
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+Q + L LR+ L IGG+ M L+V+KKG+
Sbjct: 236 VQEFTNVLREKNYPELRSMLCIGGIDMRSQLEVVKKGVH 274
>gi|402225571|gb|EJU05632.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 613
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 112/158 (70%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ K + Y +P+KTSWR P I ++ D +R I V+G+D+PP +F MK+P
Sbjct: 127 LAKDVHYTEPLKTSWRPPHWIREQSERDFDRLRDKYHIQVDGEDIPPPIETFSDMKIPSP 186
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
L++ ++KGIKKPTPIQ+QG+ A +GRD+IGIAFTGSGKTLVF LP++M +E+E KLP
Sbjct: 187 LLKFFKSKGIKKPTPIQIQGLTTAFAGRDMIGIAFTGSGKTLVFCLPLIMLAMEEEKKLP 246
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F+ GEGP G+I+CPSRELA QT++ + + AL G +
Sbjct: 247 FVRGEGPVGIILCPSRELANQTYENVIAWTKALEEGGY 284
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF LP++M +E+E KLPF+ GEGP G+I+CPSRELA QT++ +
Sbjct: 214 RDMIGIAFTGSGKTLVFCLPLIMLAMEEEKKLPFVRGEGPVGIILCPSRELANQTYENVI 273
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ AL + T L +GG+ M V+++GI
Sbjct: 274 AWTKALEEGGYPRVNTLLCMGGISMADQSHVMQRGIH 310
>gi|255575815|ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223531759|gb|EEF33579.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 500
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 115/153 (75%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P I + + D IR+ I+V+G+D+PP +F+ M+
Sbjct: 2 SVRELAKGITYTEPLLTGWKPPLQIRRMSRKQCDAIRKQWHIIVDGEDIPPPIKNFKSMR 61
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
PE +++ L+ KGI +PTPIQVQG+P L+GRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 62 FPEPILKKLKDKGIVQPTPIQVQGLPVILTGRDMIGIAFTGSGKTLVFVLPMIMVALQEE 121
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
+P PGEGP+GLIICPSRELARQT+++++ +
Sbjct: 122 IMMPIAPGEGPFGLIICPSRELARQTYEVVEQF 154
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 73/98 (74%), Gaps = 6/98 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLP++M L++E +P PGEGP+GLIICPSRELARQT+++++
Sbjct: 93 RDMIGIAFTGSGKTLVFVLPMIMVALQEEIMMPIAPGEGPFGLIICPSRELARQTYEVVE 152
Query: 68 YYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A P LR L IGGV M L+V+KKG+
Sbjct: 153 QFLIPMKEAGYP-ELRPLLCIGGVDMRSQLEVVKKGVH 189
>gi|170094876|ref|XP_001878659.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647113|gb|EDR11358.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 617
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 111/156 (71%), Gaps = 3/156 (1%)
Query: 95 IKKGIQYNDPIKTS---WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKL 151
+ +GI Y + +KT WR P+ I + H +R ILVEGDD+PP F MK+
Sbjct: 129 LARGITYTESLKTRHDIWRPPKYIRERSEAQHHALRGKFHILVEGDDIPPPIEHFVDMKI 188
Query: 152 PESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQET 211
PE+++ L++K I PTPIQ+QGIP A SGRDIIGIAFTGSGKTL F LP++M LE+E+
Sbjct: 189 PEAILEYLKSKRIVTPTPIQLQGIPTAFSGRDIIGIAFTGSGKTLAFCLPLIMLALEEES 248
Query: 212 KLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
KLPF+ GEGP G+I+CPSRELA QT++ + +CAAL
Sbjct: 249 KLPFVRGEGPVGIILCPSRELANQTYENVVTWCAAL 284
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIAFTGSGKTL F LP++M LE+E+KLPF+ GEGP G+I+CPSRELA QT++
Sbjct: 217 SGRDIIGIAFTGSGKTLAFCLPLIMLALEEESKLPFVRGEGPVGIILCPSRELANQTYEN 276
Query: 66 IQYYCAALPI-----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +CAAL PL + L +GG+ M+ V+ KG+
Sbjct: 277 VVTWCAALAKDGKYPPLNSLLCMGGISMSDQSHVMSKGLH 316
>gi|387169548|gb|AFJ66207.1| hypothetical protein 34G24.5 [Capsella rubella]
Length = 591
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 112/157 (71%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + +GI Y +P+ T W+ P I SL + D++R+ L I+V GDDVPP +F MK
Sbjct: 93 SVRELARGITYTEPLLTGWKPPLDIRSLSSKQRDLLRKQLHIIVNGDDVPPPIKNFEDMK 152
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P ++ L+ KGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTL FVLP++M L++E
Sbjct: 153 FPRPVLDTLKEKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLAFVLPMIMIALQEE 212
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+P P EGP GLI+CPSRELA QT+++I+ + A L
Sbjct: 213 MMMPIAPREGPIGLIVCPSRELASQTYEVIEQFVAPL 249
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL FVLP++M L++E +P P EGP GLI+CPSRELA QT+++
Sbjct: 182 SGRDMIGIAFTGSGKTLAFVLPMIMIALQEEMMMPIAPREGPIGLIVCPSRELASQTYEV 241
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A L LR+ L IGGV M L+V+K+G+
Sbjct: 242 IEQFVAPLVKAGYPTLRSLLCIGGVDMRSQLEVVKRGVH 280
>gi|440798731|gb|ELR19798.1| DEADbox ATP-dependent RNA helicase 35B, putative [Acanthamoeba
castellanii str. Neff]
Length = 606
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 106/151 (70%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
K I ++D I+TSWR PR + + ++ IR ILVEG+ VP F MK P ++
Sbjct: 149 KDITFSDSIETSWRPPRWVREMSEEDCQEIRDEWHILVEGERVPNPIKRFEDMKFPRPII 208
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+L KGIKKPTPIQ+QG+P LSGRD+IG+AFTGSGKTLVF LP++M LE+E K+P
Sbjct: 209 ESLRDKGIKKPTPIQIQGLPVILSGRDMIGLAFTGSGKTLVFSLPLIMLALEEEKKMPIT 268
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGP+G+I+CPSRELA+QTH +I C L
Sbjct: 269 SGEGPFGIIVCPSRELAKQTHSVISRICDYL 299
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+AFTGSGKTLVF LP++M LE+E K+P GEGP+G+I+CPSRELA+QTH +
Sbjct: 232 SGRDMIGLAFTGSGKTLVFSLPLIMLALEEEKKMPITSGEGPFGIIVCPSRELAKQTHSV 291
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
I C L LRT L IGGVP + D++++GI
Sbjct: 292 ISRICDYLARAGNPQLRTLLCIGGVPFKEQADLVRRGIH 330
>gi|164659842|ref|XP_001731045.1| hypothetical protein MGL_2044 [Malassezia globosa CBS 7966]
gi|159104943|gb|EDP43831.1| hypothetical protein MGL_2044 [Malassezia globosa CBS 7966]
Length = 606
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
I + I Y + ++ SW+AP + D + +R R+ VEG D PP +FR MK+P+
Sbjct: 121 IARDIHYTETVRRSWQAPHFVRRRTDLENAKLREKYRVSVEGRDPPPLISNFRDMKVPDC 180
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L+AKGI+ PTPIQ+QG+P A SGRD+IGIAFTGSGKTL F LP+++F +E E +LP
Sbjct: 181 IIDHLKAKGIQAPTPIQMQGLPTAFSGRDMIGIAFTGSGKTLTFSLPLILFAVEAERRLP 240
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F GEGP GLI+CPSRELARQT+D I AL G +
Sbjct: 241 FEQGEGPVGLIVCPSRELARQTYDSIIAMAEALEYGGY 278
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP+++F +E E +LPF GEGP GLI+CPSRELARQT+D
Sbjct: 206 SGRDMIGIAFTGSGKTLTFSLPLILFAVEAERRLPFEQGEGPVGLIVCPSRELARQTYDS 265
Query: 66 IQYYCAALP----IPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I AL +RT L IGG+ M++ V+++G+
Sbjct: 266 IIAMAEALEYGGYARIRTLLCIGGIHMSEQSHVLRRGVH 304
>gi|449547738|gb|EMD38706.1| hypothetical protein CERSUDRAFT_113886 [Ceriporiopsis subvermispora
B]
Length = 618
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 115/153 (75%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ K +QY +P+KT+WR PR + ++ H +R I+VEG+D+PP +F MK+PES
Sbjct: 133 LAKDVQYTEPLKTTWRPPRFVRERSEEEHRRLREKYHIIVEGEDIPPPIENFTDMKVPES 192
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
LV+ L++K I PTPIQ+QGIP A SGRD+IGIAFTGSGKTL F LP++MF LE+E KLP
Sbjct: 193 LVKFLKSKRITIPTPIQLQGIPTAFSGRDMIGIAFTGSGKTLAFCLPLIMFALEEECKLP 252
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP G+I+CPSRELA QT++ + + +AL
Sbjct: 253 FVRGEGPVGVILCPSRELATQTYENVLTWTSAL 285
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 5/103 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTL F LP++MF LE+E KLPF+ GEGP G+I+CPSRELA QT
Sbjct: 215 TAFSGRDMIGIAFTGSGKTLAFCLPLIMFALEEECKLPFVRGEGPVGVILCPSRELATQT 274
Query: 63 HDIIQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + + +AL L L IGG+ M+ V+ KG+
Sbjct: 275 YENVLTWTSALAKDGKYPQLNVLLCIGGISMSDQSHVLNKGLH 317
>gi|255553305|ref|XP_002517695.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223543327|gb|EEF44859.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 585
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 111/153 (72%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P CI + + D IR+ I +GDD+PP +F+ M+
Sbjct: 86 SVQELAKGITYTEPLLTGWKPPLCIRKMSQKQCDSIRKKWHIKADGDDIPPPVKNFQDMR 145
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
PE +++ L+AKGI +PTPIQ+QG+P LSGRD+IGIAFTGSGKTL FVLP++ ++E
Sbjct: 146 FPEPILKTLKAKGIVQPTPIQIQGLPVILSGRDMIGIAFTGSGKTLAFVLPMITIAFQEE 205
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
+P P EGP+GLIICPSRELARQT+++++ +
Sbjct: 206 IMMPIAPREGPFGLIICPSRELARQTYEVVEQF 238
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 70/100 (70%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL FVLP++ ++E +P P EGP+GLIICPSRELARQT+++
Sbjct: 175 SGRDMIGIAFTGSGKTLAFVLPMITIAFQEEIMMPIAPREGPFGLIICPSRELARQTYEV 234
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + A P LR L +GGV M L+V+KKG+
Sbjct: 235 VEQFLIPTRRAGYP-ELRALLCVGGVDMRSQLEVVKKGVH 273
>gi|301090390|ref|XP_002895410.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262098662|gb|EEY56714.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 565
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 109/151 (72%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
+GI Y + +KT+WR PR I + + D +R+ ILVEG+DVPP SF M+ P +++
Sbjct: 44 EGIHYKESMKTTWRPPRSIADMTQEECDAVRKKWHILVEGEDVPPPIKSFEYMRFPPAIL 103
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
AL+AK I +PTPIQVQ IP L+GRD+IGIAFTGSGKT+ F LP++M LE+E K+P +
Sbjct: 104 DALKAKNILRPTPIQVQAIPCILAGRDMIGIAFTGSGKTVTFTLPLVMLALEEEKKMPII 163
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGP+GLI+ PSREL RQT D++ ++ + L
Sbjct: 164 GHEGPFGLIVGPSRELMRQTFDVVTHFTSHL 194
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 4/92 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKT+ F LP++M LE+E K+P + EGP+GLI+ PSREL RQT D++
Sbjct: 129 RDMIGIAFTGSGKTVTFTLPLVMLALEEEKKMPIIGHEGPFGLIVGPSRELMRQTFDVVT 188
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVI 95
++ + L LR L IGG Q D+I
Sbjct: 189 HFTSHLFKAGYPELRGLLCIGGEDKRQQSDLI 220
>gi|388493098|gb|AFK34615.1| unknown [Medicago truncatula]
Length = 589
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 116/153 (75%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P I + + D+I++ I+V G+++PP +F+ M+
Sbjct: 91 SVRELAKGITYTEPLPTGWKPPLHIRRMSKKDCDLIQKQWHIIVNGEEIPPPIKNFKDMR 150
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P+ +++ L+ KGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M +++E
Sbjct: 151 FPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEE 210
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
+P +PGEGP+GLIICPSRELARQT+++I+ +
Sbjct: 211 IMMPIVPGEGPFGLIICPSRELARQTYEVIEEF 243
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 75/100 (75%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M +++E +P +PGEGP+GLIICPSRELARQT+++
Sbjct: 180 SGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEV 239
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P LR L IGG+ M L+++KKG+
Sbjct: 240 IEEFLLPLKEAGYP-ELRPLLCIGGIDMRSQLEIVKKGVH 278
>gi|84468270|dbj|BAE71218.1| putative DEAD-box protein abstrakt [Trifolium pratense]
Length = 588
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 122/164 (74%), Gaps = 3/164 (1%)
Query: 83 IGGVPMNQSLDVIK---KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDV 139
I +P N++L ++ KGI Y +P+ T W+ P I + + ++I++ I+V+G++
Sbjct: 79 IENLPDNKTLKSVRELAKGITYTEPLPTGWKPPLHIRRMSKKGCELIQKQWHIIVDGEEN 138
Query: 140 PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFV 199
PP +F+ M+ P+ +++ L+ KGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFV
Sbjct: 139 PPPIKNFKDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFV 198
Query: 200 LPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
LP++M +++E +P +PGEGP+GLIICPSRELARQT+++I+ +
Sbjct: 199 LPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEVIEQF 242
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 75/100 (75%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M +++E +P +PGEGP+GLIICPSRELARQT+++
Sbjct: 179 SGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEV 238
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P LR L IGG+ M L+++KKG+
Sbjct: 239 IEQFLLPLKEAGYP-ELRPLLCIGGIDMRSQLEIVKKGVH 277
>gi|357443391|ref|XP_003591973.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355481021|gb|AES62224.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 589
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 116/153 (75%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P I + + D+I++ I+V G+++PP +F+ M+
Sbjct: 91 SVRELAKGITYTEPLPTGWKPPLHIRRMSKKDCDLIQKQWHIIVNGEEIPPPIKNFKDMR 150
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P+ +++ L+ KGI +PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP++M +++E
Sbjct: 151 FPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEE 210
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
+P +PGEGP+GLIICPSRELARQT+++I+ +
Sbjct: 211 IMMPIVPGEGPFGLIICPSRELARQTYEVIEEF 243
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 75/100 (75%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M +++E +P +PGEGP+GLIICPSRELARQT+++
Sbjct: 180 SGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSRELARQTYEV 239
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + A P LR L IGG+ M L+++KKG+
Sbjct: 240 IEEFLLPLKEAGYP-ELRPLLCIGGIDMRSQLEIVKKGVH 278
>gi|224129414|ref|XP_002328711.1| predicted protein [Populus trichocarpa]
gi|222839009|gb|EEE77360.1| predicted protein [Populus trichocarpa]
Length = 587
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 114/153 (74%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI Y +P+ T W+ P I + + D IR+ I+V+G+ +PP F+ M+
Sbjct: 89 SVRELAKGITYTEPLLTGWKPPLPIRKMSRKECDAIRKQWHIIVDGEKIPPPIKHFKDMR 148
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
PE +++ L+AKGI +PTPIQVQG+P L+GRD+IGIAFTGSGKTLVFVLP++M L++E
Sbjct: 149 FPEPILKMLKAKGIVQPTPIQVQGLPVILTGRDMIGIAFTGSGKTLVFVLPLIMIALQEE 208
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
+P +PGEGP GLI+CPSRELARQT+++++ +
Sbjct: 209 IMMPIMPGEGPVGLIVCPSRELARQTYEVVEEF 241
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 73/98 (74%), Gaps = 6/98 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP GLI+CPSRELARQT+++++
Sbjct: 180 RDMIGIAFTGSGKTLVFVLPLIMIALQEEIMMPIMPGEGPVGLIVCPSRELARQTYEVVE 239
Query: 68 YY-----CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A P LR L IGGV M L+V+KKG+
Sbjct: 240 EFLIPMRAAGYP-ELRPLLCIGGVDMRSQLEVVKKGVH 276
>gi|321261169|ref|XP_003195304.1| hypothetical protein CGB_G4440W [Cryptococcus gattii WM276]
gi|317461777|gb|ADV23517.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 615
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 108/153 (70%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ +G+ + + +KTSWRAP I + + +R I+ EGD +PP F MK+P+
Sbjct: 131 LAQGVTWTESLKTSWRAPHYIRNKTELEQQAVRDKYHIIAEGDHIPPPIPHFADMKIPKP 190
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L+AKGIK+PTPIQ+QG+P A SGRD+IGIAFTGSGKTL FVLP +M LE E ++P
Sbjct: 191 ILSYLQAKGIKRPTPIQMQGLPTAFSGRDMIGIAFTGSGKTLAFVLPAIMAALEMEARVP 250
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP GLIICPSRELARQT++ CA L
Sbjct: 251 FVRGEGPVGLIICPSRELARQTYEQCVAVCAVL 283
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL FVLP +M LE E ++PF+ GEGP GLIICPSRELARQT++
Sbjct: 216 SGRDMIGIAFTGSGKTLAFVLPAIMAALEMEARVPFVRGEGPVGLIICPSRELARQTYEQ 275
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
CA L LR+ L IGG+ M DV+ KG+
Sbjct: 276 CVAVCAVLKESGNYPELRSLLCIGGISMADQADVLNKGVH 315
>gi|348673476|gb|EGZ13295.1| hypothetical protein PHYSODRAFT_546996 [Phytophthora sojae]
Length = 544
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 112/152 (73%), Gaps = 2/152 (1%)
Query: 97 KGIQYNDPIKTSWRAPRCILSL-PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESL 155
+GI Y + ++T+WR PR I ++ PD+ D +R+ ILVEG+DVPP SF M+ P ++
Sbjct: 44 EGIHYKEAMQTTWRPPRSIAAMTPDEC-DAVRKKWHILVEGEDVPPPIKSFEYMRFPPAI 102
Query: 156 VRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF 215
+ AL+AK I +PTPIQVQ IP L+GRDIIGIAFTGSGKT+ F LP++M LE+E K+P
Sbjct: 103 LEALKAKNIMRPTPIQVQAIPCILAGRDIIGIAFTGSGKTVTFTLPLVMLALEEEKKMPI 162
Query: 216 LPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+ EGP+GLI+ PSREL RQT D+++++ L
Sbjct: 163 IGHEGPFGLIVGPSRELMRQTFDVVKHFTNHL 194
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 64/93 (68%), Gaps = 6/93 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+ F LP++M LE+E K+P + EGP+GLI+ PSREL RQT D+++
Sbjct: 129 RDIIGIAFTGSGKTVTFTLPLVMLALEEEKKMPIIGHEGPFGLIVGPSRELMRQTFDVVK 188
Query: 68 YYC-----AALPIPLRTCLAIGGVPMNQSLDVI 95
++ A P LR+ L IGG Q D+I
Sbjct: 189 HFTNHLFKAGYP-ELRSLLCIGGEDKRQQSDLI 220
>gi|255085454|ref|XP_002505158.1| DEAD/DEAH box helicase [Micromonas sp. RCC299]
gi|226520427|gb|ACO66416.1| DEAD/DEAH box helicase [Micromonas sp. RCC299]
Length = 675
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 109/157 (69%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + K + Y I+T W+AP I L ++ D +R I+VEG D+PP +FR MK
Sbjct: 175 SVQELSKDVAYTHSIETGWKAPAHIRKLTEEERDDVRNKWHIIVEGVDIPPPIKTFREMK 234
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P+ ++ L KGI +PTPIQ+QG+P LSGRDIIGIAFTGSGK+L FVLP++M + +E
Sbjct: 235 FPKPIIDELTRKGIARPTPIQIQGLPVILSGRDIIGIAFTGSGKSLTFVLPMIMAAMMEE 294
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
++P GEGP GLI+CPSRELARQTH++I+ + L
Sbjct: 295 HRMPLEGGEGPVGLILCPSRELARQTHEVIEGFTVEL 331
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 4/96 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIAFTGSGK+L FVLP++M + +E ++P GEGP GLI+CPSRELARQTH++
Sbjct: 264 SGRDIIGIAFTGSGKSLTFVLPMIMAAMMEEHRMPLEGGEGPVGLILCPSRELARQTHEV 323
Query: 66 IQYYCAALP----IPLRTCLAIGGVPMNQSLDVIKK 97
I+ + L +R L IGGV + D+++
Sbjct: 324 IEGFTVELAKQGMAQMRIMLCIGGVDSREQSDIVRN 359
>gi|397630020|gb|EJK69601.1| hypothetical protein THAOC_09127, partial [Thalassiosira oceanica]
Length = 583
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 112/158 (70%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
Q+ + +G++Y + T WR PR IL L + + IR ILVEG+D PP SF M
Sbjct: 80 QAASELAEGVKYRTSLPTGWRCPRKILKLGEGEWNKIRDKWHILVEGEDCPPPIRSFVDM 139
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
P ++ AL K +K+PTPIQ+QG+PAAL GRD++GIAFTGSGKTL F LP++M +E+
Sbjct: 140 AFPRPIIDALTRKNVKRPTPIQMQGLPAALGGRDMVGIAFTGSGKTLSFSLPLVMAAVEE 199
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
E ++P +PGEGP G+++ PSRELARQT++++ +CAAL
Sbjct: 200 EARMPLVPGEGPVGIVLAPSRELARQTYEVVTEFCAAL 237
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 79/126 (62%), Gaps = 17/126 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIAFTGSGKTL F LP++M +E+E ++P +PGEGP G+++ PSRELARQT++++
Sbjct: 172 RDMVGIAFTGSGKTLSFSLPLVMAAVEEEARMPLVPGEGPVGIVLAPSRELARQTYEVVT 231
Query: 68 YYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQV 122
+CAAL +R+ L IGG L Q+ D R C+++ P ++
Sbjct: 232 EFCAALDADPKYPGIRSQLLIGGESGRDQLQ------QFRD------RGVHCVVATPGRL 279
Query: 123 HDIIRR 128
D +++
Sbjct: 280 RDFLKK 285
>gi|388583375|gb|EIM23677.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 590
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 103/141 (73%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
GI Y+ ++TSW+ P I + + +IRR ILVEG D+PP C +F MKLP +++R
Sbjct: 115 GISYSRIMETSWKPPEYIRQRSSEGNSLIRRKHHILVEGSDIPPPCETFADMKLPGAILR 174
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
L+ K I PTPIQ+QGI A SGRD+IGIAFTGSGKTL F LP LMF LE+E+KL F
Sbjct: 175 YLKFKKILSPTPIQIQGISTAFSGRDMIGIAFTGSGKTLSFSLPTLMFALEEESKLGFDK 234
Query: 218 GEGPYGLIICPSRELARQTHD 238
GEGP G+I+CPSRELARQTHD
Sbjct: 235 GEGPIGIILCPSRELARQTHD 255
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTL F LP LMF LE+E+KL F GEGP G+I+CPSRELARQT
Sbjct: 194 TAFSGRDMIGIAFTGSGKTLSFSLPTLMFALEEESKLGFDKGEGPIGIILCPSRELARQT 253
Query: 63 HDIIQYYCAALP---IPL-RTCLAIGGVPMNQSLDVIKKGIQ 100
HD + AL PL R+ L IGG+ M + ++ G
Sbjct: 254 HDGLIQMSRALNDDGYPLVRSLLCIGGISMQDQSETLQNGFH 295
>gi|15234166|ref|NP_195063.1| putative DEAD-box ATP-dependent RNA helicase 43 [Arabidopsis
thaliana]
gi|75337897|sp|Q9SZB4.1|RH43_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 43
gi|4490304|emb|CAB38795.1| putative protein [Arabidopsis thaliana]
gi|7270285|emb|CAB80054.1| putative protein [Arabidopsis thaliana]
gi|332660816|gb|AEE86216.1| putative DEAD-box ATP-dependent RNA helicase 43 [Arabidopsis
thaliana]
Length = 542
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 111/157 (70%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + +GI Y +P+ T W+ P + + + D+IR+ I V G+D+PP +F MK
Sbjct: 44 SVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMK 103
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P L+R L+ KGI PTPIQVQG+P LSGRD+IGIAFTGSGKTLVFVLP+++ L++E
Sbjct: 104 FPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEE 163
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+P GEGP L+ICPSRELA+QT+D+++ + A+L
Sbjct: 164 IMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASL 200
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 73/99 (73%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP+++ L++E +P GEGP L+ICPSRELA+QT+D+
Sbjct: 133 SGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDV 192
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + A+L LR+ L IGGV M LDV+KKG+
Sbjct: 193 VEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVH 231
>gi|342320808|gb|EGU12747.1| DEAD-box protein abstrakt [Rhodotorula glutinis ATCC 204091]
Length = 637
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 108/160 (67%)
Query: 93 DVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLP 152
+ + KGI Y + +K +WR P I ++ + IR ILV GDD+PP +FR MKLP
Sbjct: 149 EEVAKGIVYTERMKATWRPPHYIRGKSEEELEAIRDKFHILVSGDDIPPPIPNFRDMKLP 208
Query: 153 ESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETK 212
+ L+ L+ K I PTPIQ+QG+P A SGRD+IGIAFTGSGKTL F LP+LM LE+E +
Sbjct: 209 KPLLEYLKKKKISAPTPIQLQGLPVAFSGRDMIGIAFTGSGKTLAFSLPLLMLALEEEKR 268
Query: 213 LPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
LPF+ GEGP G+I+CPSRELARQT + + L G +
Sbjct: 269 LPFMQGEGPVGIIMCPSRELARQTFEGLNEMARCLEQGGY 308
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 76/123 (61%), Gaps = 9/123 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP+LM LE+E +LPF+ GEGP G+I+CPSRELARQT +
Sbjct: 236 SGRDMIGIAFTGSGKTLAFSLPLLMLALEEEKRLPFMQGEGPVGIIMCPSRELARQTFEG 295
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + CL GG P +SL I GI + +T +++ P ++ D+
Sbjct: 296 LN--------EMARCLEQGGYPQVRSLLCI-GGISMAEQGQTLANGFHMVVATPGRLQDM 346
Query: 126 IRR 128
+ +
Sbjct: 347 LEK 349
>gi|58269456|ref|XP_571884.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134114169|ref|XP_774332.1| hypothetical protein CNBG3130 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256967|gb|EAL19685.1| hypothetical protein CNBG3130 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228120|gb|AAW44577.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 615
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 108/153 (70%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ +G+ + + +KTSWRAP I + + +R I+VEG+++PP F MK+P+
Sbjct: 131 LAQGVSWTESLKTSWRAPHYIRNKTEDEQQAVRDKYHIIVEGENIPPPIPHFADMKIPKP 190
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ L+AKGIK PTPIQ+QG+P A SGRD+IGIAFTGSGKTL F+LP +M LE E K+P
Sbjct: 191 ILGYLQAKGIKHPTPIQMQGLPTAFSGRDMIGIAFTGSGKTLAFILPAIMAALEMEAKVP 250
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ GEGP GLIICPSRELARQT++ C L
Sbjct: 251 FVRGEGPVGLIICPSRELARQTYEQCVAMCTVL 283
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 67/100 (67%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F+LP +M LE E K+PF+ GEGP GLIICPSRELARQT++
Sbjct: 216 SGRDMIGIAFTGSGKTLAFILPAIMAALEMEAKVPFVRGEGPVGLIICPSRELARQTYEQ 275
Query: 66 IQYYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
C L LR+ L IGG+ M DV+ KG+
Sbjct: 276 CVAMCTVLKESGSYPELRSLLCIGGISMADQADVLNKGVH 315
>gi|406698049|gb|EKD01295.1| hypothetical protein A1Q2_04373 [Trichosporon asahii var. asahii
CBS 8904]
Length = 539
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S + KG Y + +K++WR P I SL + +R I+VEG+D PP +F MK
Sbjct: 121 SAQELAKGTVYTESMKSTWRPPHYIRSLSAEEQQAVRDKYSIIVEGNDPPPTIENFADMK 180
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
+P+ ++ L+ KGIK+P+ IQ+QGIPAA +GRD+IGIAFTGSGKTL F LP +M LE E
Sbjct: 181 IPQPILEYLDNKGIKRPSLIQMQGIPAAFAGRDMIGIAFTGSGKTLTFTLPAVMQALEME 240
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+KLPF+ GEGP GLIICPSRELARQT D C AL
Sbjct: 241 SKLPFVKGEGPAGLIICPSRELARQTFDGCVAMCKAL 277
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LP +M LE E+KLPF+ GEGP GLIICPSRELARQT D
Sbjct: 212 RDMIGIAFTGSGKTLTFTLPAVMQALEMESKLPFVKGEGPAGLIICPSRELARQTFDGCV 271
Query: 68 YYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
C AL LR+ L IGG+ M DV+ KG+
Sbjct: 272 AMCKALSDSGKYPELRSLLCIGGISMADQADVLNKGVH 309
>gi|388857803|emb|CCF48697.1| probable DEAD-box ATP-dependent RNA helicase 35 [Ustilago hordei]
Length = 639
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 110/159 (69%), Gaps = 1/159 (0%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY +P+ TSWR P I S D+ ++ +R IL +G D+P +FR MK+P
Sbjct: 155 LAKGIQYTEPLTTSWRPPSYIRSRTDEENEKLREKNHILTDGLDIPAVITNFRDMKVPGC 214
Query: 155 LVRAL-EAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
++ L E K I KP+PIQ+QG+P A SGRD+IGIAFTGSGKTL F LPI+MF E+E +L
Sbjct: 215 VINYLKEQKKIIKPSPIQMQGLPTAFSGRDMIGIAFTGSGKTLAFSLPIVMFAAEEEQRL 274
Query: 214 PFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
F GEGP G+I+CPSRELARQT++ I+ A+ G +
Sbjct: 275 AFTRGEGPVGMIVCPSRELARQTYESIKALAEAVEHGGY 313
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 17/128 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LPI+MF E+E +L F GEGP G+I+CPSRELARQT++
Sbjct: 241 SGRDMIGIAFTGSGKTLAFSLPIVMFAAEEEQRLAFTRGEGPVGMIVCPSRELARQTYES 300
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
I+ A+ + L IGG+ M + + KG +++ P +
Sbjct: 301 IKALAEAVEHGGYPQIGVLLCIGGISMAEQHHTMSKGFH-------------IVVATPGR 347
Query: 122 VHDIIRRN 129
+ D++ +N
Sbjct: 348 LQDMLSKN 355
>gi|443925919|gb|ELU44676.1| DEAD-box protein abstrakt [Rhizoctonia solani AG-1 IA]
Length = 731
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 106/149 (71%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
IQY +P+KT+WRAPR + + + IR I+ EGD++PP SF MK+P+ L+
Sbjct: 227 IQYTEPLKTTWRAPRFVRERTEDQNIKIREAHHIIAEGDNIPPPIASFADMKVPKQLLTH 286
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
++K I PTPIQ+QG+P A SGRD+IGIAFTGSGKTL F LP++M +E+E KLPF G
Sbjct: 287 FKSKRIFAPTPIQIQGLPTAFSGRDMIGIAFTGSGKTLTFCLPLIMLAMEEEAKLPFQRG 346
Query: 219 EGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGP G+I+CPSRELA QT+D + + AL
Sbjct: 347 EGPVGIILCPSRELANQTYDNVLEWTNAL 375
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 11/106 (10%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP++M +E+E KLPF GEGP G+I+CPSRELA QT+D
Sbjct: 308 SGRDMIGIAFTGSGKTLTFCLPLIMLAMEEEAKLPFQRGEGPVGIILCPSRELANQTYDN 367
Query: 66 IQYYCAALPIP-----------LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + AL P +RT L IGG+ M++ V+ +G
Sbjct: 368 VLEWTNALATPSEPGGRPPYPRVRTLLCIGGINMSEQSHVMGQGFH 413
>gi|401883338|gb|EJT47551.1| hypothetical protein A1Q1_03572 [Trichosporon asahii var. asahii
CBS 2479]
Length = 596
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 108/157 (68%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S + KG Y + +K++WR P I SL + +R I+VEG+D PP +F MK
Sbjct: 121 SAQELAKGTVYTESMKSTWRPPHYIRSLSAEEQQAVRDKYSIIVEGNDPPPTIENFADMK 180
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
+P+ ++ L+ KGIK+P+ IQ+QGIPAA +GRD+IGIAFTGSGKTL F LP +M LE E
Sbjct: 181 IPQPILEYLDNKGIKRPSLIQMQGIPAAFAGRDMIGIAFTGSGKTLTFTLPAVMQALEME 240
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+KLPF+ GEGP GLIICPSRELARQT D C AL
Sbjct: 241 SKLPFVKGEGPAGLIICPSRELARQTFDGCVAMCKAL 277
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LP +M LE E+KLPF+ GEGP GLIICPSRELARQT D
Sbjct: 212 RDMIGIAFTGSGKTLTFTLPAVMQALEMESKLPFVKGEGPAGLIICPSRELARQTFDGCV 271
Query: 68 YYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
C AL LR+ L IGG+ M DV+ KG+
Sbjct: 272 AMCKALSDSGKYPELRSLLCIGGISMADQADVLNKGVH 309
>gi|71021007|ref|XP_760734.1| hypothetical protein UM04587.1 [Ustilago maydis 521]
gi|46100328|gb|EAK85561.1| hypothetical protein UM04587.1 [Ustilago maydis 521]
Length = 645
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 111/159 (69%), Gaps = 1/159 (0%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY +P+ TSW AP + + + ++ +R IL +G DVPP +FR MK+PE
Sbjct: 160 LAKGIQYTEPLTTSWTAPSFVRNRSLEQNEKLREKNHILTDGVDVPPVITNFRDMKVPEC 219
Query: 155 LVRALEA-KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
++ L+ K I KP+PIQ+QG+P A SGRD+IGIAFTGSGKTL F LPILM E+E +L
Sbjct: 220 VIDYLKTQKKIVKPSPIQMQGLPTAFSGRDMIGIAFTGSGKTLAFSLPILMLAAEEERRL 279
Query: 214 PFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
PF GEGP G+I+CPSRELARQT++ I+ AL G +
Sbjct: 280 PFTRGEGPVGMIVCPSRELARQTYESIKGLAEALVQGGY 318
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LPILM E+E +LPF GEGP G+I+CPSRELARQT++
Sbjct: 246 SGRDMIGIAFTGSGKTLAFSLPILMLAAEEERRLPFTRGEGPVGMIVCPSRELARQTYES 305
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ AL + L IGG+ M + + KG
Sbjct: 306 IKGLAEALVQGGYPQIGVLLCIGGISMAEQHHTMSKGFH 344
>gi|395330116|gb|EJF62500.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 619
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 114/154 (74%), Gaps = 2/154 (1%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSL-PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPE 153
+ KG+ Y +P+K+SWR P+ I P++ I +N I+VEGD++PP +F MK+PE
Sbjct: 134 LAKGVLYTEPMKSSWRPPKFIRDRNPEETRRIWEKN-HIIVEGDNIPPPIENFTDMKVPE 192
Query: 154 SLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
LV+ L++K I KPTPIQ+QGIP A +GRD+IGIAFTGSGKTL F LP++M LE+E +L
Sbjct: 193 PLVKFLKSKRITKPTPIQLQGIPTAFAGRDMIGIAFTGSGKTLAFCLPLMMVALEEEARL 252
Query: 214 PFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
P + GEGP G+I+CPSRELA QT++ + + AAL
Sbjct: 253 PLVRGEGPVGIILCPSRELATQTYENVLTWTAAL 286
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LP++M LE+E +LP + GEGP G+I+CPSRELA QT++ +
Sbjct: 221 RDMIGIAFTGSGKTLAFCLPLMMVALEEEARLPLVRGEGPVGIILCPSRELATQTYENVL 280
Query: 68 YYCAALPIP-----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ AAL L T L IGG+ M + V+ KG+
Sbjct: 281 TWTAALAKDGQYPQLNTLLCIGGISMGEQSHVLNKGLH 318
>gi|384484476|gb|EIE76656.1| hypothetical protein RO3G_01360 [Rhizopus delemar RA 99-880]
Length = 594
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 106/155 (68%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
G Y +P+K+SW PR I L ++ H IR ILVEG+D+ P F+ MK P+ ++
Sbjct: 111 GKLYTEPMKSSWTPPRYIRELSEKEHQAIRDKYHILVEGEDLVPPIRHFKDMKFPQPILD 170
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
L+ K I KPTPIQ+QG+P AL GRD+IGIAFTGSGKTL F LP++MF LE ET+LP
Sbjct: 171 YLKEKKIDKPTPIQLQGLPVALKGRDMIGIAFTGSGKTLSFSLPLVMFALEAETRLPLTQ 230
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
GEGP G+I+CPSRELARQT + + AL G +
Sbjct: 231 GEGPIGMILCPSRELARQTFEGLNNMAIALYKGGY 265
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/98 (56%), Positives = 66/98 (67%), Gaps = 6/98 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD--- 64
RD+IGIAFTGSGKTL F LP++MF LE ET+LP GEGP G+I+CPSRELARQT +
Sbjct: 195 RDMIGIAFTGSGKTLSFSLPLVMFALEAETRLPLTQGEGPIGMILCPSRELARQTFEGLN 254
Query: 65 --IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I Y P LR L IGG+ M DV+K+G+
Sbjct: 255 NMAIALYKGGYP-ELRPLLCIGGIDMRDQYDVLKRGVH 291
>gi|390598234|gb|EIN07632.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 620
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/154 (55%), Positives = 109/154 (70%), Gaps = 2/154 (1%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILS-LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPE 153
+ KGI Y + KTSWR P+ I PDQ H IR I+VEG+D PP F MK+PE
Sbjct: 135 LAKGISYTESRKTSWRPPKHIRDRTPDQ-HQRIREKHHIIVEGNDPPPPVERFADMKIPE 193
Query: 154 SLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
L++ L++K I +PTPIQ+QGIP A SGRD+IGIAFTGSGKTL F LP++M E+E KL
Sbjct: 194 PLLKLLKSKRIIEPTPIQIQGIPVAFSGRDMIGIAFTGSGKTLAFCLPVIMTAAEEEAKL 253
Query: 214 PFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
PF+ GEGP G+I+CPSRELA QT++ + + AL
Sbjct: 254 PFVRGEGPVGIILCPSRELATQTYENVLAWTDAL 287
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 67/100 (67%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP++M E+E KLPF+ GEGP G+I+CPSRELA QT++
Sbjct: 220 SGRDMIGIAFTGSGKTLAFCLPVIMTAAEEEAKLPFVRGEGPVGIILCPSRELATQTYEN 279
Query: 66 IQYYCAALPI-----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + AL L T L IGG+ M + V+ KG+
Sbjct: 280 VLAWTDALSSNGQYPKLNTLLCIGGISMGEQSHVLNKGLH 319
>gi|358057602|dbj|GAA96600.1| hypothetical protein E5Q_03270 [Mixia osmundae IAM 14324]
Length = 620
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 108/162 (66%), Gaps = 4/162 (2%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRI----LVEGDDVPPACCSFRLMK 150
+ KGI Y +P+KTSWRAPR I + H+ IR I E D++PP +F MK
Sbjct: 131 LAKGIVYREPLKTSWRAPRYIRERTEVEHEAIRTKFHIHAETTAEDDEIPPPIPTFAEMK 190
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LP +++ L+AK I PTPIQ+QGIP AL GRD+IG+AFTGSGKTL F LP+LMF +E E
Sbjct: 191 LPRPILKHLKAKKILAPTPIQLQGIPVALQGRDMIGVAFTGSGKTLAFSLPLLMFAVEAE 250
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+LPF EGP G+IICPSRELARQT++ + AL +
Sbjct: 251 KRLPFTSSEGPIGVIICPSRELARQTYEGLLEMAKALEYDGY 292
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IG+AFTGSGKTL F LP+LMF +E E +LPF EGP G+IICPSRELARQT++ +
Sbjct: 222 RDMIGVAFTGSGKTLAFSLPLLMFAVEAEKRLPFTSSEGPIGVIICPSRELARQTYEGLL 281
Query: 68 YYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
AL + T LAIGG+ M + V KG+
Sbjct: 282 EMAKALEYDGYPQVNTLLAIGGLDMREQQHVFAKGVH 318
>gi|452820850|gb|EME27887.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 1885
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 108/158 (68%), Gaps = 2/158 (1%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
I K I Y +PI+TSW P+ + L +R+ + VEG+++PP C +FR MK P+
Sbjct: 111 IAKNIHYTEPIRTSWNPPKYLEELSAVQWQTLRQKYGVSVEGEEIPPMCFTFREMKFPKP 170
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+ AL+ +K+PTPIQ+QG+P AL+GRD+IGIA TGSGKTL F+LP++M E E KLP
Sbjct: 171 IRTALKEMKVKRPTPIQMQGLPVALTGRDLIGIASTGSGKTLAFLLPLVMMAWEAERKLP 230
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+PGEGP GLIICPSRELARQ +D + C I SF
Sbjct: 231 LIPGEGPLGLIICPSRELARQIYDNTE--CFVRHIQSF 266
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 17/125 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL F+LP++M E E KLP +PGEGP GLIICPSRELARQ +D +
Sbjct: 198 RDLIGIASTGSGKTLAFLLPLVMMAWEAERKLPLIPGEGPLGLIICPSRELARQIYDNTE 257
Query: 68 YYCAALP----IPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
+ + +R+ LAIGGV +++ L+++ +G+ C+ + P ++H
Sbjct: 258 CFVRHIQSFDGTTIRSILAIGGVSIHEQLEIMSEGVHI------------CV-ATPGRLH 304
Query: 124 DIIRR 128
D+++R
Sbjct: 305 DLLKR 309
>gi|17507945|ref|NP_491962.1| Protein SACY-1 [Caenorhabditis elegans]
gi|351064176|emb|CCD72466.1| Protein SACY-1 [Caenorhabditis elegans]
Length = 630
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 106/147 (72%), Gaps = 1/147 (0%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG +Y +PI T+WR P I + ++I R+ L I EGD +PP SF MK P+S
Sbjct: 140 LTKGEKYEEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKS 199
Query: 155 LVRALEA-KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
L+ ++ KGI PT IQ+QGIP ALSGRD+IGIA TGSGKT+ FVLP++MFCLEQE KL
Sbjct: 200 LLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKL 259
Query: 214 PFLPGEGPYGLIICPSRELARQTHDII 240
PF+ EGP+GLII PSRELARQ D+I
Sbjct: 260 PFMRSEGPFGLIIVPSRELARQIFDLI 286
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 71/100 (71%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD- 64
+ RD+IGIA TGSGKT+ FVLP++MFCLEQE KLPF+ EGP+GLII PSRELARQ D
Sbjct: 226 SGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDL 285
Query: 65 IIQYY----CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
II+ + A LP +R L IGGVP+ + ++ GI
Sbjct: 286 IIEMFDALGKAGLP-EMRAGLCIGGVPIGEQAKDVRDGIH 324
>gi|350854466|emb|CAZ36385.2| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 311
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 104/138 (75%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KGIQY+ PI+TSW P I ++ + IR+N RIL EGDDVPP F M+ P++L+
Sbjct: 148 KGIQYDKPIQTSWVPPVYIQEQSEEKSEEIRKNFRILTEGDDVPPPIRHFSEMRFPKALI 207
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
L+ +GI KPTPIQ+QG+PA LSGRD+IGIAFTGSGKT+VF +P+++F ++QE K+PF+
Sbjct: 208 DLLKLRGITKPTPIQMQGLPAVLSGRDMIGIAFTGSGKTMVFSIPVILFSMDQEQKIPFI 267
Query: 217 PGEGPYGLIICPSRELAR 234
EGPYGL++ PSR L +
Sbjct: 268 QNEGPYGLVLGPSRLLKQ 285
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 46/55 (83%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 60
+ RD+IGIAFTGSGKT+VF +P+++F ++QE K+PF+ EGPYGL++ PSR L +
Sbjct: 231 SGRDMIGIAFTGSGKTMVFSIPVILFSMDQEQKIPFIQNEGPYGLVLGPSRLLKQ 285
>gi|346474154|gb|AEO36921.1| hypothetical protein [Amblyomma maculatum]
Length = 485
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 99/127 (77%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R+ RILVEG+ +P +F+ MK P ++ +L KGI KPTPIQ+QG+PA L GRD+I
Sbjct: 26 VRQKCRILVEGEGIPAPITTFKEMKFPRPILSSLRRKGITKPTPIQMQGLPAVLYGRDMI 85
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
GIAFTGSGKTLVFVLP+LMFCLEQE +LPF+ EGPYGLI+CPSRELA+QT++I+ ++
Sbjct: 86 GIAFTGSGKTLVFVLPLLMFCLEQEKRLPFIQNEGPYGLIVCPSRELAKQTYEIVSFFVR 145
Query: 246 ALPIGSF 252
L +
Sbjct: 146 GLEDAGY 152
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 76/97 (78%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVFVLP+LMFCLEQE +LPF+ EGPYGLI+CPSRELA+QT++I+
Sbjct: 82 RDMIGIAFTGSGKTLVFVLPLLMFCLEQEKRLPFIQNEGPYGLIVCPSRELAKQTYEIVS 141
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ L LR CL IGG + + L+V+++G+
Sbjct: 142 FFVRGLEDAGYPSLRGCLCIGGTSVREQLEVVRRGVH 178
>gi|392596009|gb|EIW85332.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 620
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 106/156 (67%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGI Y + +KT+W P+ IL ++ H IR I+V+G+D+PP F MK+P
Sbjct: 135 LAKGISYLESLKTTWNPPKYILDQTEEHHRQIREKYHIIVDGEDIPPPIEHFADMKIPHE 194
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
LV + K I PTPIQ+QGIP A +GRD+IGIAFTGSGKTL F LP++M LE+E KLP
Sbjct: 195 LVDFFKTKRIVTPTPIQLQGIPTAFAGRDMIGIAFTGSGKTLAFCLPLIMLALEEEGKLP 254
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIG 250
+ GEGP G+++CPSRELA QT++ + + AL G
Sbjct: 255 LIRGEGPVGVVLCPSRELATQTYENVLVWTDALAKG 290
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LP++M LE+E KLP + GEGP G+++CPSRELA QT++ +
Sbjct: 222 RDMIGIAFTGSGKTLAFCLPLIMLALEEEGKLPLIRGEGPVGVVLCPSRELATQTYENVL 281
Query: 68 YYCAALPI-----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ AL L T L IGG+ M + V+ KG+
Sbjct: 282 VWTDALAKGGRYPQLNTLLCIGGISMGEQSHVMNKGMH 319
>gi|384253261|gb|EIE26736.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 576
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 105/151 (69%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
+GI Y +KT W+ P + L + +R I+VEG+++ P F+ MK P ++
Sbjct: 85 QGISYTRNLKTGWKPPLKVRQLSEDQAQDLRDRFHIIVEGENLLPPILDFKDMKFPAPVL 144
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
R L +K I +PTPIQ+QG+P L+GRD+IG+AFTGSGKTLVF LP+LM L++E ++P
Sbjct: 145 RQLASKNISRPTPIQMQGLPVILAGRDMIGVAFTGSGKTLVFALPLLMLSLQEEVRMPLE 204
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGP G+I+CPSRELARQTH++IQ Y A+
Sbjct: 205 GGEGPVGMIVCPSRELARQTHEVIQGYITAM 235
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 72/97 (74%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IG+AFTGSGKTLVF LP+LM L++E ++P GEGP G+I+CPSRELARQTH++IQ
Sbjct: 170 RDMIGVAFTGSGKTLVFALPLLMLSLQEEVRMPLEGGEGPVGMIVCPSRELARQTHEVIQ 229
Query: 68 YYCAALP---IP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A+ +P LR+ L +GG+ M D +++G+
Sbjct: 230 GYITAMKEDGLPELRSLLVMGGIDMRTQTDALRRGVH 266
>gi|124506471|ref|XP_001351833.1| RNA helicase-1 [Plasmodium falciparum 3D7]
gi|23504859|emb|CAD51640.1| RNA helicase-1 [Plasmodium falciparum 3D7]
Length = 665
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 123/201 (61%), Gaps = 12/201 (5%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
I + E+ ++ ++ AL PL QS+ KGI Y + +++ W+
Sbjct: 137 IDETEEIRKREEKLLAQVSKALNAPL------------QSVKERAKGIVYKENVESIWKL 184
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P+ L + IRR I V GDD+P +F+ MK P+++++ L K IKKPT IQ
Sbjct: 185 PKKYKLLKKSYVEKIRRIFYIDVNGDDIPAPIKNFKDMKFPKAILKGLRKKNIKKPTQIQ 244
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
+QG+P+ L GRDIIGIAFTGSGKT+VFVLP++M CLE E + GEGP GLIICPSRE
Sbjct: 245 MQGLPSILLGRDIIGIAFTGSGKTIVFVLPLIMKCLEAEIRCKLEEGEGPIGLIICPSRE 304
Query: 232 LARQTHDIIQYYCAALPIGSF 252
LA QTH+II+Y+C L +F
Sbjct: 305 LATQTHNIIKYFCEFLYKDNF 325
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+VFVLP++M CLE E + GEGP GLIICPSRELA QTH+II+
Sbjct: 255 RDIIGIAFTGSGKTIVFVLPLIMKCLEAEIRCKLEEGEGPIGLIICPSRELATQTHNIIK 314
Query: 68 YYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
Y+C L LR+ IGG+ + I+KGI
Sbjct: 315 YFCEFLYKDNFPTLRSLCMIGGISAYEQGREIQKGIH 351
>gi|308504808|ref|XP_003114587.1| hypothetical protein CRE_28204 [Caenorhabditis remanei]
gi|308258769|gb|EFP02722.1| hypothetical protein CRE_28204 [Caenorhabditis remanei]
Length = 631
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG +Y++PI T+WR P I ++ R+ L I EG+++PP SF MK P++
Sbjct: 141 LTKGEKYDEPITTAWRPPGHIRRQTQSDYENQRKRLGISCEGENIPPPIGSFLEMKFPKT 200
Query: 155 LVRALE-AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
L+ ++ KGI PT IQ+QGIP ALSGRD+IGIA TGSGKT+ FVLP++MFCLEQE KL
Sbjct: 201 LLEFMQNEKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQELKL 260
Query: 214 PFLPGEGPYGLIICPSRELARQTHDII 240
PF+ EGP+GLII PSRELARQ +D++
Sbjct: 261 PFMRNEGPFGLIIVPSRELARQIYDLV 287
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 71/100 (71%), Gaps = 6/100 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD- 64
+ RD+IGIA TGSGKT+ FVLP++MFCLEQE KLPF+ EGP+GLII PSRELARQ +D
Sbjct: 227 SGRDMIGIASTGSGKTMTFVLPLVMFCLEQELKLPFMRNEGPFGLIIVPSRELARQIYDL 286
Query: 65 IIQYY----CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+I+ + A LP +R L IGGVP+ + + GI
Sbjct: 287 VIEMFDAINKAGLP-EMRAGLCIGGVPIGEQAKDFRNGIH 325
>gi|221480806|gb|EEE19233.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
Length = 657
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 85 GVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACC 144
G P+ Q + KGI Y +++SWR P + + +R I V G+D PP
Sbjct: 150 GAPL-QGVRERAKGIVYTSRMQSSWRLPDKYAEMTLAEANEVRERFFIDVSGEDPPPPFR 208
Query: 145 SFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILM 204
+F+ M+ P+ +++ L+ +GI PT IQ+QGIPA L GRDIIGIAFTGSGKTLVF LP++M
Sbjct: 209 NFKDMRFPQPILKGLQERGISYPTQIQMQGIPAILQGRDIIGIAFTGSGKTLVFSLPMIM 268
Query: 205 FCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
LE E + P+LPGEGP+GL++CPSRELA QT+D+ ++C L G +
Sbjct: 269 GALESEIRSPYLPGEGPFGLVVCPSRELASQTNDVCSFFCKKLEDGGY 316
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 77/127 (60%), Gaps = 17/127 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
RDIIGIAFTGSGKTLVF LP++M LE E + P+LPGEGP+GL++CPSRELA QT+D+
Sbjct: 244 QGRDIIGIAFTGSGKTLVFSLPMIMGALESEIRSPYLPGEGPFGLVVCPSRELASQTNDV 303
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
++C L LR IGG + +++G+ CI++ P +
Sbjct: 304 CSFFCKKLEDGGYPALRCVCIIGGCSAVEQAKEVRQGVH-------------CIVATPGR 350
Query: 122 VHDIIRR 128
+ D++ +
Sbjct: 351 LTDMLNK 357
>gi|313226956|emb|CBY22101.1| unnamed protein product [Oikopleura dioica]
Length = 664
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 106/155 (68%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
G Y+ P++ +W+ P I L D+ +R+ L ILV+G P C FR MK+P L+
Sbjct: 164 GTIYDKPLQKNWQPPSWITDLGDKYARDVRKRLGILVDGKGCPAPCKRFRDMKIPACLIS 223
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
AL+ KGI PTPIQ+QGIPAA +GRD+IGI+FTGSGKTL F +P++M LEQE ++PF+
Sbjct: 224 ALKRKGINIPTPIQMQGIPAAFTGRDMIGISFTGSGKTLSFSIPLIMAALEQEIEMPFVR 283
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
EGP+ L+ICPSRELA+QT ++Y L G F
Sbjct: 284 DEGPFSLVICPSRELAKQTGHELEYLADHLDAGGF 318
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGI+FTGSGKTL F +P++M LEQE ++PF+ EGP+ L+ICPSRELA+QT ++
Sbjct: 248 RDMIGISFTGSGKTLSFSIPLIMAALEQEIEMPFVRDEGPFSLVICPSRELAKQTGHELE 307
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y L LR +AIGG + +++DV+KKG+
Sbjct: 308 YLADHLDAGGFSKLRVAVAIGGTAVKETMDVVKKGVH 344
>gi|82915217|ref|XP_729012.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485792|gb|EAA20577.1| RNA helicase-1 [Plasmodium yoelii yoelii]
Length = 654
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 121/196 (61%), Gaps = 12/196 (6%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCIL 116
E+ ++ I+ AL PL QS+ KGI Y D KT W P
Sbjct: 130 EIRKKEEHILAQISKALNAPL------------QSVKERSKGIVYKDSFKTIWTLPNKYK 177
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
+P + D IR+ I V G+D+PP +F+ MK P+++++ L+ K I KPT IQ+QG+P
Sbjct: 178 KMPKEYVDKIRKVFYIDVSGNDIPPPIKNFKDMKFPKAILKGLKKKKINKPTQIQMQGLP 237
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 236
+ L GRDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLIICPSRELA QT
Sbjct: 238 SILLGRDIIGIAFTGSGKTIVFVLPLIMTCLEAELRCPIEEGEGPLGLIICPSRELASQT 297
Query: 237 HDIIQYYCAALPIGSF 252
H+II+Y+C L F
Sbjct: 298 HNIIKYFCEYLYKDKF 313
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLIICPSRELA QTH+II+
Sbjct: 243 RDIIGIAFTGSGKTIVFVLPLIMTCLEAELRCPIEEGEGPLGLIICPSRELASQTHNIIK 302
Query: 68 YYCAAL---PIP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
Y+C L P L++ IGGV + + IKKG+
Sbjct: 303 YFCEYLYKDKFPMLKSLCVIGGVSTYEQGNEIKKGVH 339
>gi|237845101|ref|XP_002371848.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211969512|gb|EEB04708.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|221501473|gb|EEE27248.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 657
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 85 GVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACC 144
G P+ Q + KGI Y +++SWR P + + +R I V G+D PP
Sbjct: 150 GAPL-QGVRERAKGIVYTSRMQSSWRLPDKYAEMTLAEANEVRERFFIDVSGEDPPPPFR 208
Query: 145 SFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILM 204
+F+ M+ P+ +++ L+ +GI PT IQ+QGIPA L GRDIIGIAFTGSGKTLVF LP++M
Sbjct: 209 NFKDMRFPQPILKGLQERGISYPTQIQMQGIPAILQGRDIIGIAFTGSGKTLVFSLPMIM 268
Query: 205 FCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
LE E + P+LPGEGP+GL++CPSRELA QT+D+ ++C L G +
Sbjct: 269 GALESEIRSPYLPGEGPFGLVVCPSRELASQTNDVCSFFCKKLEDGGY 316
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 77/127 (60%), Gaps = 17/127 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
RDIIGIAFTGSGKTLVF LP++M LE E + P+LPGEGP+GL++CPSRELA QT+D+
Sbjct: 244 QGRDIIGIAFTGSGKTLVFSLPMIMGALESEIRSPYLPGEGPFGLVVCPSRELASQTNDV 303
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
++C L LR IGG + +++G+ CI++ P +
Sbjct: 304 CSFFCKKLEDGGYPALRCVCIIGGCSAVEQAKEVRQGVH-------------CIVATPGR 350
Query: 122 VHDIIRR 128
+ D++ +
Sbjct: 351 LTDMLNK 357
>gi|443900316|dbj|GAC77642.1| DEAD-box protein abstrakt [Pseudozyma antarctica T-34]
Length = 641
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 109/159 (68%), Gaps = 1/159 (0%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY +P+ T+W P I + + ++ +R IL +G D+PP +FR MK+PE
Sbjct: 156 LAKGIQYTEPLTTTWTPPSYIRTRSELDNEKLRDKNHILADGVDIPPVITNFRDMKVPEC 215
Query: 155 LVRALEA-KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
++ L+ K I KP+PIQ+QG+P A +GRD+IGIAFTGSGKTL F LPI+M E+E +L
Sbjct: 216 VIEYLKTQKKIVKPSPIQMQGLPTAFAGRDMIGIAFTGSGKTLAFSLPIIMLACEEEKRL 275
Query: 214 PFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
PF GEGP G+I+CPSRELARQT + I+ AL G +
Sbjct: 276 PFTRGEGPVGMIVCPSRELARQTFESIKGIADALVQGEY 314
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTL F LPI+M E+E +LPF GEGP G+I+CPSRELARQT + I+
Sbjct: 244 RDMIGIAFTGSGKTLAFSLPIIMLACEEEKRLPFTRGEGPVGMIVCPSRELARQTFESIK 303
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
AL + L IGG+ M + + KG
Sbjct: 304 GIADALVQGEYPQIGVLLCIGGISMAEQQHTMSKGFH 340
>gi|219120692|ref|XP_002181079.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407795|gb|EEC47731.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 500
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 107/151 (70%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
+G+ Y P+ +SWR PR IL ++ IR + V+G+D+PP F MK P+ ++
Sbjct: 9 QGVVYEKPMPSSWRVPRYILEQGEEAWQAIRDEWHMEVQGNDIPPPLKRFVDMKFPQPIL 68
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+L+ KGI +PTPIQ+QG+P AL+GRD++GIAFTGSGKTL F LP++M LE+E ++P
Sbjct: 69 ASLKQKGIARPTPIQMQGLPVALAGRDMVGIAFTGSGKTLTFGLPLVMAALEEELRMPIA 128
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
PGEGP G+I+ PSRELARQT++++ AL
Sbjct: 129 PGEGPVGIILAPSRELARQTYELVSELATAL 159
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 27/137 (19%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDII 66
RD++GIAFTGSGKTL F LP++M LE+E ++P PGEGP G+I+ PSRELARQT++++
Sbjct: 93 GRDMVGIAFTGSGKTLTFGLPLVMAALEEELRMPIAPGEGPVGIILAPSRELARQTYELV 152
Query: 67 QYYCAALPIP-------------LRTCLAIGGVPM-NQSLDVIKKGIQYNDPIKTSWRAP 112
AL P LRT L IGG + +Q V ++GI
Sbjct: 153 SELATALTTPPAGDSREKNRYPQLRTQLLIGGESVRDQVQTVQQQGIH------------ 200
Query: 113 RCILSLPDQVHDIIRRN 129
C+++ P ++ D+++R
Sbjct: 201 -CVVATPGRLRDLLKRK 216
>gi|224006724|ref|XP_002292322.1| DEAD/DEAH box RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220971964|gb|EED90297.1| DEAD/DEAH box RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 663
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 111/158 (70%), Gaps = 1/158 (0%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
Q+ + +G +Y + T+WR P ++ + +I R+ ILVEG+D+PP SF M
Sbjct: 164 QAASELAEGTKYKFSLPTAWRCPAKVMREASEWENI-RKKWHILVEGEDIPPPIRSFGDM 222
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
P ++ AL+ K +K+PTPIQ+QG+ ALSGRD++GIAFTGSGKTL F LP++M LE+
Sbjct: 223 AFPPPIMEALKKKNVKRPTPIQMQGLTVALSGRDMVGIAFTGSGKTLSFSLPLVMAALEE 282
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
E ++P +PGEGP G+++ PSRELARQT++++ +C AL
Sbjct: 283 EARMPLVPGEGPVGIVLAPSRELARQTYEVVTEFCTAL 320
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 79/130 (60%), Gaps = 20/130 (15%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIAFTGSGKTL F LP++M LE+E ++P +PGEGP G+++ PSRELARQT+++
Sbjct: 253 SGRDMVGIAFTGSGKTLSFSLPLVMAALEEEARMPLVPGEGPVGIVLAPSRELARQTYEV 312
Query: 66 IQYYCAALPI------PLRTCLAIGGVPMNQSLDVIK-KGIQYNDPIKTSWRAPRCILSL 118
+ +C AL +R+ L IGG L + KG+ C+++
Sbjct: 313 VTEFCTALTESGGRYPSIRSQLLIGGESARDQLQPFRDKGVH-------------CVVAT 359
Query: 119 PDQVHDIIRR 128
P ++ D +++
Sbjct: 360 PGRLRDFLKK 369
>gi|302850370|ref|XP_002956712.1| hypothetical protein VOLCADRAFT_77220 [Volvox carteri f.
nagariensis]
gi|300257927|gb|EFJ42169.1| hypothetical protein VOLCADRAFT_77220 [Volvox carteri f.
nagariensis]
Length = 648
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 89 NQSLDVIKK---GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCS 145
Q+L +K+ G+ Y+ ++T W+ P LP ++ +R LRI+ +G ++PP S
Sbjct: 141 KQALKAVKELATGVTYSRSMETGWKPPLRYRRLPQELQQQLRDALRIVCDGKNIPPPIPS 200
Query: 146 FRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMF 205
F MKLP +++R L KGIKKPT IQ+QG+P ALSGRD+IGIA TGSGKTLVF LP+++
Sbjct: 201 FADMKLPPAVLRVLAGKGIKKPTQIQMQGLPVALSGRDMIGIASTGSGKTLVFALPMVLI 260
Query: 206 CLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
L++E ++P EGP G++ICPSRELA QT++I YC AL
Sbjct: 261 ALQEEMRMPLGQNEGPIGMVICPSRELATQTYEIADMYCKAL 302
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTLVF LP+++ L++E ++P EGP G++ICPSRELA QT++I
Sbjct: 235 SGRDMIGIASTGSGKTLVFALPMVLIALQEEMRMPLGQNEGPIGMVICPSRELATQTYEI 294
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC AL +R L IGG+ + I++G+
Sbjct: 295 ADMYCKALGADRYPEIRAMLCIGGIDAKPMYETIRRGVH 333
>gi|401402766|ref|XP_003881329.1| hypothetical protein NCLIV_043620 [Neospora caninum Liverpool]
gi|325115741|emb|CBZ51296.1| hypothetical protein NCLIV_043620 [Neospora caninum Liverpool]
Length = 673
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 85 GVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACC 144
G P+ Q + KGI Y ++++WR P + + +R I V G+D PP
Sbjct: 166 GAPL-QGVRERAKGIVYTSRMQSTWRLPDKYAGMTLAEANEVRERFFIDVSGEDPPPPFR 224
Query: 145 SFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILM 204
+F+ M+ P+ +++ L+ +GI PT IQ+QGIPA L GRDIIGIAFTGSGKTLVF LP++M
Sbjct: 225 NFKDMRFPQPILKGLQERGISFPTQIQMQGIPAILQGRDIIGIAFTGSGKTLVFSLPMIM 284
Query: 205 FCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
LE ET+ +LPGEGP+GL++CPSRELA QT+D+ ++C L G +
Sbjct: 285 GALESETRAAYLPGEGPFGLVVCPSRELASQTNDVCSFFCKKLEEGGY 332
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 17/127 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
RDIIGIAFTGSGKTLVF LP++M LE ET+ +LPGEGP+GL++CPSRELA QT+D+
Sbjct: 260 QGRDIIGIAFTGSGKTLVFSLPMIMGALESETRAAYLPGEGPFGLVVCPSRELASQTNDV 319
Query: 66 IQYYCAALP---IPLRTCL-AIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
++C L P CL IGG + + +++G+ CI++ P +
Sbjct: 320 CSFFCKKLEEGGYPALRCLCVIGGCSVVEQAREVRQGVH-------------CIVATPGR 366
Query: 122 VHDIIRR 128
+ D++ +
Sbjct: 367 LTDMLNK 373
>gi|70948515|ref|XP_743756.1| RNA helicase-1 [Plasmodium chabaudi chabaudi]
gi|56523410|emb|CAH76963.1| RNA helicase-1, putative [Plasmodium chabaudi chabaudi]
Length = 633
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 120/196 (61%), Gaps = 12/196 (6%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCIL 116
E+ ++ I+ AL PL QS+ KGI Y D KT W P
Sbjct: 109 EIRKKEEHILAQISKALNAPL------------QSVKERAKGIVYKDSFKTIWTLPSKYK 156
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
+ + D IR+ I V G+DVPP +F+ MK P+++++ L+ K I KPT IQ+QG+P
Sbjct: 157 KMSKEYVDKIRKVFYIDVSGNDVPPPIKNFKDMKFPKAILKGLKKKKINKPTQIQMQGLP 216
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 236
+ L GRDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLIICPSRELA QT
Sbjct: 217 SILIGRDIIGIAFTGSGKTIVFVLPLIMTCLEAELRCPIEEGEGPLGLIICPSRELASQT 276
Query: 237 HDIIQYYCAALPIGSF 252
H+II Y+C L +F
Sbjct: 277 HNIINYFCEYLHKDNF 292
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLIICPSRELA QTH+II
Sbjct: 222 RDIIGIAFTGSGKTIVFVLPLIMTCLEAELRCPIEEGEGPLGLIICPSRELASQTHNIIN 281
Query: 68 YYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
Y+C L L++ IGGV + IKKG+
Sbjct: 282 YFCEYLHKDNFPMLKSLCVIGGVSTYEQGKEIKKGVH 318
>gi|68076513|ref|XP_680176.1| RNA helicase-1 [Plasmodium berghei strain ANKA]
gi|56501072|emb|CAH93553.1| RNA helicase-1, putative [Plasmodium berghei]
Length = 632
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 121/196 (61%), Gaps = 12/196 (6%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCIL 116
E+ ++ I+ AL PL QS+ KGI Y + KT W P
Sbjct: 108 EIRKKEEHILAQISKALNAPL------------QSVKERSKGIVYKNSFKTIWTLPSKYK 155
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
+P + D IR+ I + G+DVPP +F+ MK P+++++ L+ K I KPT IQ+QG+P
Sbjct: 156 KMPKEYVDKIRKVFYIDISGNDVPPPIKNFKDMKFPKAILKGLKKKKINKPTQIQMQGLP 215
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 236
+ L GRDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLIICPSRELA QT
Sbjct: 216 SILIGRDIIGIAFTGSGKTIVFVLPLIMTCLEAELRCPIEEGEGPLGLIICPSRELASQT 275
Query: 237 HDIIQYYCAALPIGSF 252
H+II+Y+C L F
Sbjct: 276 HNIIKYFCEYLYKDKF 291
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLIICPSRELA QTH+II+
Sbjct: 221 RDIIGIAFTGSGKTIVFVLPLIMTCLEAELRCPIEEGEGPLGLIICPSRELASQTHNIIK 280
Query: 68 YYCAAL---PIP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
Y+C L P L++ IGGV + IKKG+
Sbjct: 281 YFCEYLYKDKFPMLKSLCVIGGVSTYEQGKEIKKGVH 317
>gi|159484128|ref|XP_001700112.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272608|gb|EDO98406.1| predicted protein [Chlamydomonas reinhardtii]
Length = 637
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 111/167 (66%), Gaps = 3/167 (1%)
Query: 89 NQSLDVIKK---GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCS 145
Q+L +K+ G++Y I T W+ P +P + +R LRI+ +G +PP S
Sbjct: 133 KQALKAVKELATGVEYTHSIGTGWKPPLRYRRIPQDLQQQLRDLLRIVCDGRSIPPPIPS 192
Query: 146 FRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMF 205
F MKLP +++R L +KGIKKPT IQ+QG+P ALSGRD+IGIA TGSGKTLVF LP+++
Sbjct: 193 FADMKLPPAVLRVLASKGIKKPTQIQMQGLPVALSGRDMIGIASTGSGKTLVFTLPMILI 252
Query: 206 CLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
L++E ++P EGP G++ICPSRELA QT++I YC AL +
Sbjct: 253 ALQEEMRMPLGQNEGPIGMVICPSRELATQTYEIADMYCQALNADRY 299
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTLVF LP+++ L++E ++P EGP G++ICPSRELA QT++I
Sbjct: 227 SGRDMIGIASTGSGKTLVFTLPMILIALQEEMRMPLGQNEGPIGMVICPSRELATQTYEI 286
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC AL +R L IGG+ + +++G+
Sbjct: 287 ADMYCQALNADRYPEVRVMLCIGGIDPKPMYETLRRGLH 325
>gi|341885714|gb|EGT41649.1| hypothetical protein CAEBREN_04532 [Caenorhabditis brenneri]
Length = 631
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KG +Y +PI T+WR P I ++ R+ L I EGD +PP SF MK P+ L+
Sbjct: 143 KGEKYEEPIVTAWRPPGHIRRQTQADYENQRKRLGISCEGDSIPPPIGSFLEMKFPKELL 202
Query: 157 RALEA-KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF 215
L+ KGI PT IQ+QGIP ALSGRD+IGIA TGSGKT+ FVLP++MFCLEQE KL F
Sbjct: 203 EFLQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLIMFCLEQEMKLHF 262
Query: 216 LPGEGPYGLIICPSRELARQTHDII 240
EGP+GLII PSRELARQ +D+I
Sbjct: 263 TRNEGPFGLIIVPSRELARQIYDLI 287
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ FVLP++MFCLEQE KL F EGP+GLII PSRELARQ +D+
Sbjct: 227 SGRDMIGIASTGSGKTMTFVLPLIMFCLEQEMKLHFTRNEGPFGLIIVPSRELARQIYDL 286
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I A+ LR L IGGVP+ + + GI
Sbjct: 287 IIEMSEAIAKVGLPELRAGLCIGGVPIGEQAKEFRLGIH 325
>gi|115444241|ref|NP_001045900.1| Os02g0150100 [Oryza sativa Japonica Group]
gi|113535431|dbj|BAF07814.1| Os02g0150100, partial [Oryza sativa Japonica Group]
Length = 460
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/122 (60%), Positives = 96/122 (78%)
Query: 131 RILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFT 190
ILV+GDDVPP FR ++LPE ++R L KGI +PTPIQVQG+P LSGRD+IGIAFT
Sbjct: 2 HILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFT 61
Query: 191 GSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIG 250
GSGKTLVFVLP++M L++E +P +PGEGP+G+IICPSRELA+QT+D+I+ + L
Sbjct: 62 GSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEA 121
Query: 251 SF 252
+
Sbjct: 122 GY 123
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 51 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDV 110
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + L +R L IGGV M LDV+KKG+
Sbjct: 111 IEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVH 149
>gi|341885245|gb|EGT41180.1| hypothetical protein CAEBREN_03374 [Caenorhabditis brenneri]
Length = 631
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KG +Y +PI T+WR P I ++ R+ L I EGD +PP SF MK P+ L+
Sbjct: 143 KGEKYEEPIVTAWRPPGHIRRQTQTDYENQRKRLGISCEGDSIPPPIGSFLEMKFPKELL 202
Query: 157 RALEA-KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF 215
L+ KGI PT IQ+QGIP ALSGRD+IGIA TGSGKT+ FVLP++MFCLEQE KL F
Sbjct: 203 EFLQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLIMFCLEQEMKLHF 262
Query: 216 LPGEGPYGLIICPSRELARQTHDII 240
EGP+GLII PSRELARQ +D+I
Sbjct: 263 TRNEGPFGLIIVPSRELARQIYDLI 287
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ FVLP++MFCLEQE KL F EGP+GLII PSRELARQ +D+
Sbjct: 227 SGRDMIGIASTGSGKTMTFVLPLIMFCLEQEMKLHFTRNEGPFGLIIVPSRELARQIYDL 286
Query: 66 IQYYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I A+ LR L IGGVP+ + + GI
Sbjct: 287 IIEMSEAIAKVGLPELRAGLCIGGVPIGEQAKEFRLGIH 325
>gi|268568362|ref|XP_002640231.1| Hypothetical protein CBG12746 [Caenorhabditis briggsae]
Length = 631
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KG +Y +PI T+WR P I ++ R+ L I EG+ +PP SF MK P+ L+
Sbjct: 143 KGEKYEEPITTAWRPPGHIRRQTQTDYENQRKRLGISCEGETIPPPIGSFLEMKFPKPLL 202
Query: 157 RALEA-KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF 215
+ L+ KGI PT IQ+QGIP AL GRD+IGIA TGSGKT+ FVLP++MFC+EQE KLPF
Sbjct: 203 QFLQKQKGIVTPTAIQIQGIPVALCGRDMIGIASTGSGKTMTFVLPLIMFCIEQEVKLPF 262
Query: 216 LPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+ EGP+GLII PSRELARQ +D+I A+ F
Sbjct: 263 MRNEGPFGLIIVPSRELARQIYDLIIEMSEAIAKAGF 299
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKT+ FVLP++MFC+EQE KLPF+ EGP+GLII PSRELARQ +D+I
Sbjct: 229 RDMIGIASTGSGKTMTFVLPLIMFCIEQEVKLPFMRNEGPFGLIIVPSRELARQIYDLII 288
Query: 68 YYCAALPI----PLRTCLAIGGVPMNQSLDVIKKGIQ 100
A+ LR L IGGVP+ + ++GI
Sbjct: 289 EMSEAIAKAGFPELRAGLCIGGVPIGEQAKDFRQGIH 325
>gi|303282327|ref|XP_003060455.1| DEAD/DEAH box helicase [Micromonas pusilla CCMP1545]
gi|226457926|gb|EEH55224.1| DEAD/DEAH box helicase [Micromonas pusilla CCMP1545]
Length = 671
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 107/157 (68%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S I K + Y I+T W+ P IL++ ++ + +R I+VEG D+PP SF+ MK
Sbjct: 171 SAQEISKDVTYTQSIETGWKPPTHILNMTEEECEDVRDKWHIIVEGVDIPPPIKSFKEMK 230
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P ++ L KGI +PTPIQ+QG+P L+GRDIIGIAFTGSGK+L F+LP++M + +E
Sbjct: 231 FPGPILNELARKGIARPTPIQIQGLPVILTGRDIIGIAFTGSGKSLTFILPMIMSAMMEE 290
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
++P EGP GLI+CPSRELARQTH++I+ + L
Sbjct: 291 RRMPLQGMEGPCGLILCPSRELARQTHEVIEGFTVEL 327
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 16/126 (12%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGK+L F+LP++M + +E ++P EGP GLI+CPSRELARQTH++I+
Sbjct: 262 RDIIGIAFTGSGKSLTFILPMIMSAMMEERRMPLQGMEGPCGLILCPSRELARQTHEVIE 321
Query: 68 YYCAALP----IPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
+ L +R L IGG+ + D+++ R + + P ++
Sbjct: 322 GFTVELSKQGMSEMRIMLCIGGIDSREQSDIVRD------------RGVHMVTATPGRLK 369
Query: 124 DIIRRN 129
D++ R
Sbjct: 370 DLLHRK 375
>gi|221056789|ref|XP_002259532.1| RNA helicase-1 [Plasmodium knowlesi strain H]
gi|193809604|emb|CAQ40305.1| RNA helicase-1, putative [Plasmodium knowlesi strain H]
Length = 669
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 121/199 (60%), Gaps = 12/199 (6%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
+ + E+ ++ I+ AL PL QS+ KGI YN+ KT W
Sbjct: 139 VDETEEIRKKEEKILAQVSKALNAPL------------QSVKERAKGIVYNENFKTIWTL 186
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P L D+ +R L I V G D+PP +FR MK P+ +++AL+ K I KPT IQ
Sbjct: 187 PSKYKRLSDKYVSKVRNVLYIDVNGSDIPPPIKNFRDMKFPKPILKALKKKKIDKPTQIQ 246
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
+QG+P+ L GRDIIGIAFTGSGKT+VFVLP++M CLE E + GEGP GLIICPSRE
Sbjct: 247 MQGLPSILLGRDIIGIAFTGSGKTIVFVLPLVMICLEGELRCQIEEGEGPLGLIICPSRE 306
Query: 232 LARQTHDIIQYYCAALPIG 250
LA QTH++I+Y+C L G
Sbjct: 307 LATQTHNVIKYFCEFLHEG 325
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 7/99 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+VFVLP++M CLE E + GEGP GLIICPSRELA QTH++I+
Sbjct: 257 RDIIGIAFTGSGKTIVFVLPLVMICLEGELRCQIEEGEGPLGLIICPSRELATQTHNVIK 316
Query: 68 YYCAAL------PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y+C L P+ LR+ IGGV I+KGI
Sbjct: 317 YFCEFLHEGGKYPM-LRSLCMIGGVSTFDQGREIQKGIH 354
>gi|389584055|dbj|GAB66788.1| RNA helicase-1 [Plasmodium cynomolgi strain B]
Length = 638
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 122/201 (60%), Gaps = 12/201 (5%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
+ + E+ ++ I+ AL PL QS+ KGI YN+ KT W
Sbjct: 141 VDETEEIRKKEEKILAQVSKALNAPL------------QSVKERAKGIVYNENFKTIWTL 188
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P L D+ +R I V G D+PP +FR MK P+ +++AL+ K I KPT IQ
Sbjct: 189 PSKYKLLSDKYVSKVRNVFYIDVSGSDIPPPIKNFRDMKFPKPILKALKKKKIDKPTQIQ 248
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
+QG+P+ L GRDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLI+CPSRE
Sbjct: 249 MQGLPSILLGRDIIGIAFTGSGKTIVFVLPLVMICLEGELRCPIEEGEGPLGLIVCPSRE 308
Query: 232 LARQTHDIIQYYCAALPIGSF 252
LA QTH++I+Y+C L ++
Sbjct: 309 LATQTHNVIKYFCEFLHEDNY 329
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 55/66 (83%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLI+CPSRELA QTH++I+
Sbjct: 259 RDIIGIAFTGSGKTIVFVLPLVMICLEGELRCPIEEGEGPLGLIVCPSRELATQTHNVIK 318
Query: 68 YYCAAL 73
Y+C L
Sbjct: 319 YFCEFL 324
>gi|328848613|gb|EGF97819.1| hypothetical protein MELLADRAFT_51140 [Melampsora larici-populina
98AG31]
Length = 602
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/146 (56%), Positives = 108/146 (73%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG++Y++P+ TSW+ P I ++ + +R L ILVEGDD P F+ MKL
Sbjct: 116 LAKGVEYDNPMTTSWKPPSYIRRRTEEELERLRDKLGILVEGDDCPSPIEHFQDMKLLPP 175
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
L++ L+ K IK PTPIQ+QG+P ALSGRD+IGIAFTGSGKTL F LP+L+F LE E KLP
Sbjct: 176 LLKYLKEKKIKAPTPIQMQGLPVALSGRDMIGIAFTGSGKTLAFSLPLLLFALEAEKKLP 235
Query: 215 FLPGEGPYGLIICPSRELARQTHDII 240
F+ GEGP G+I+CPSRELARQT++ I
Sbjct: 236 FIQGEGPVGIIVCPSRELARQTYETI 261
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP+L+F LE E KLPF+ GEGP G+I+CPSRELARQT++
Sbjct: 201 SGRDMIGIAFTGSGKTLAFSLPLLLFALEAEKKLPFIQGEGPVGIIVCPSRELARQTYET 260
Query: 66 IQYYCAALPIPLR-----TCLAIGGVPMNQSLDVIKKGIQ 100
I A + T L IGG+ M V+ KG
Sbjct: 261 IVAMALACAQSGKYPQVGTLLCIGGISMADQSHVMSKGFH 300
>gi|357017643|gb|AET50850.1| hypothetical protein [Eimeria tenella]
Length = 693
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 106/168 (63%), Gaps = 1/168 (0%)
Query: 85 GVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACC 144
G P+ Q + KGI Y + TSW P + + +R + V G DVPP
Sbjct: 186 GAPL-QGVRERAKGIVYPKRMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFR 244
Query: 145 SFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILM 204
+F+ M P+ ++ AL+ K I PT IQ+QGIPA L GRD+IGIAFTGSGKTLVF LP+LM
Sbjct: 245 NFKDMCFPQPILDALKKKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLM 304
Query: 205 FCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
LE E + P++ GEGP+GL++CPSRELA QT D++ ++ AL G +
Sbjct: 305 GALESEMRSPYIAGEGPWGLVVCPSRELASQTTDVVNFFATALHEGGY 352
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 77/125 (61%), Gaps = 17/125 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF LP+LM LE E + P++ GEGP+GL++CPSRELA QT D++
Sbjct: 282 RDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWGLVVCPSRELASQTTDVVN 341
Query: 68 YYCAALP---IPLRTCL-AIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
++ AL P CL IGGV + I+ G+ C+++ P ++
Sbjct: 342 FFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVH-------------CVVATPGRLT 388
Query: 124 DIIRR 128
D++ +
Sbjct: 389 DMLNK 393
>gi|209879417|ref|XP_002141149.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556755|gb|EEA06800.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 590
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 104/153 (67%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGI Y+ +KTSWR P L +R L I V G D+PP SF+ M P+
Sbjct: 59 LAKGIVYDGRMKTSWRPPPKYAVLTPAECSNLRSQLLIDVNGVDIPPPIMSFKDMGFPKG 118
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
L+ AL AKGI KPT IQ+QG+P LSGRD+IGIAFTGSGKT+VF LP++M+ LE E KL
Sbjct: 119 LIDALNAKGIMKPTQIQMQGLPVILSGRDMIGIAFTGSGKTIVFTLPMVMYSLESELKLH 178
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F+ EGP GLI+CPSRELA QT II+++ + L
Sbjct: 179 FMGMEGPDGLILCPSRELALQTTSIIEHFVSFL 211
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 54/68 (79%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKT+VF LP++M+ LE E KL F+ EGP GLI+CPSRELA QT I
Sbjct: 144 SGRDMIGIAFTGSGKTIVFTLPMVMYSLESELKLHFMGMEGPDGLILCPSRELALQTTSI 203
Query: 66 IQYYCAAL 73
I+++ + L
Sbjct: 204 IEHFVSFL 211
>gi|67970455|dbj|BAE01570.1| unnamed protein product [Macaca fascicularis]
Length = 437
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 83/99 (83%)
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
MK P +++R L+ KGI PTPIQ+QGIP LSGRD+IGIAFTGSGKTLVF LP++MFCLE
Sbjct: 1 MKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLE 60
Query: 209 QETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
QE +LPF EGPYGLIICPSRELARQTH I++YYC L
Sbjct: 61 QEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLL 99
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIAFTGSGKTLVF LP++MFCLEQE +LPF EGPYGLIICPSRELARQT
Sbjct: 29 TILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQT 88
Query: 63 HDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
H I++YYC L LR L IGG+ + + ++ I+ G+
Sbjct: 89 HGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVH 130
>gi|156095288|ref|XP_001613679.1| RNA helicase-1 [Plasmodium vivax Sal-1]
gi|148802553|gb|EDL43952.1| RNA helicase-1, putative [Plasmodium vivax]
Length = 667
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 120/196 (61%), Gaps = 12/196 (6%)
Query: 52 ICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRA 111
+ + E+ ++ I+ AL PL QS+ KGI Y++ KT W
Sbjct: 138 VDETEEIRKKEEKILAQVSKALNAPL------------QSVKERAKGIVYSENFKTIWTL 185
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P L D+ +R I V G D+PP +FR MK P+ +++AL+ K I KPT IQ
Sbjct: 186 PSKYKLLSDKYVSKVRNVFYIDVSGSDIPPPIKNFRDMKFPKPILKALKKKKIDKPTQIQ 245
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
+QG+P+ L GRDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLI+CPSRE
Sbjct: 246 MQGLPSILLGRDIIGIAFTGSGKTIVFVLPLVMICLEGELRCPIEEGEGPLGLIVCPSRE 305
Query: 232 LARQTHDIIQYYCAAL 247
LA QTH++I+Y+C L
Sbjct: 306 LATQTHNVIKYFCEFL 321
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+VFVLP++M CLE E + P GEGP GLI+CPSRELA QTH++I+
Sbjct: 256 RDIIGIAFTGSGKTIVFVLPLVMICLEGELRCPIEEGEGPLGLIVCPSRELATQTHNVIK 315
Query: 68 YYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
Y+C L LR+ IGGV I+KG+
Sbjct: 316 YFCEFLHQDKYPLLRSLCMIGGVSTFDQGREIQKGMH 352
>gi|66363286|ref|XP_628609.1| abstrakt protein SF II helicase + Znknuckle C2HC (PA)
[Cryptosporidium parvum Iowa II]
gi|46229614|gb|EAK90432.1| abstrakt protein SF II helicase + Znknuckle C2HC (PA)
[Cryptosporidium parvum Iowa II]
Length = 570
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 104/158 (65%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
+++ I KGI ++ +TSWR P+ SL +R L I+V G DVPP SF+ M
Sbjct: 54 KAVHEIAKGITFSKREETSWRVPKKYSSLSASECQDLRSRLLIVVNGSDVPPPILSFKDM 113
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
P+ ++ AL +KGI KP+ IQ+QG+P L GRD+IG+AFTGSGKT+VFVLP++MF LE
Sbjct: 114 GFPQEILDALASKGISKPSQIQMQGLPIILMGRDLIGLAFTGSGKTIVFVLPMIMFSLEA 173
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
E LPF EGP+ L++CPSRELA Q II + L
Sbjct: 174 ELSLPFKGMEGPHSLVLCPSRELALQIKRIIDEFIEFL 211
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IG+AFTGSGKT+VFVLP++MF LE E LPF EGP+ L++CPSRELA Q II
Sbjct: 146 RDLIGLAFTGSGKTIVFVLPMIMFSLEAELSLPFKGMEGPHSLVLCPSRELALQIKRIID 205
Query: 68 YYCAAL 73
+ L
Sbjct: 206 EFIEFL 211
>gi|429327422|gb|AFZ79182.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 628
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 99/140 (70%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
I+T +R + +P+ + + IR L I V+G DVPP F+ MK P S++ AL+ KGI
Sbjct: 142 IETIYRIHKKYRRVPESLANEIREALFIHVDGFDVPPPIVKFKDMKFPRSILIALKDKGI 201
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGL 224
+ PT IQ+Q +P AL GRDIIGI+ TGSGKTLVFVLP++M LE E + + GEGP+GL
Sbjct: 202 RDPTHIQMQALPIALLGRDIIGISSTGSGKTLVFVLPMIMKALEMEVRSKLIEGEGPFGL 261
Query: 225 IICPSRELARQTHDIIQYYC 244
IICPSRELA QTHDI+ Y+
Sbjct: 262 IICPSRELALQTHDIVSYFS 281
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 125/262 (47%), Gaps = 55/262 (20%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGI+ TGSGKTLVFVLP++M LE E + + GEGP+GLIICPSRELA QTHDI+
Sbjct: 219 RDIIGISSTGSGKTLVFVLPMIMKALEMEVRSKLIEGEGPFGLIICPSRELALQTHDIVS 278
Query: 68 Y---YCAALPIPLRTCLA-IGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
Y Y P LA IGG +++ ++ G+ +++ P +++
Sbjct: 279 YFSKYIEKFDGPKLFSLAIIGGSSLSKQSYKLENGVH-------------MVIATPGRLN 325
Query: 124 DIIRRNLRILVEGDDVPPACCSF-------RLMKLP-ESLVRALEAKGIKKP-------- 167
D++ + + L + C + RL+ L E +R++ A G + P
Sbjct: 326 DLLMKKMLNLSQ--------CKYLCFDEADRLVDLGFEDEIRSVLA-GFRNPRQTLLFSA 376
Query: 168 -TPIQVQGI-PAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF----LPGEGP 221
P ++Q AL I+ + TG+ T V L + E KLP L P
Sbjct: 377 TMPRKIQEFAKTALVDPIIVNVGRTGASNTNVIQYVEL---VTDEEKLPAILRCLQKTAP 433
Query: 222 YGLIICPSRELARQTHDIIQYY 243
LI C + RQ D+I Y
Sbjct: 434 PVLIFCEN----RQDVDVIHEY 451
>gi|403177235|ref|XP_003335784.2| hypothetical protein PGTG_17019 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172785|gb|EFP91365.2| hypothetical protein PGTG_17019 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 645
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 107/144 (74%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KG+QY +P++TSW P I + Q + +R L ILVEGD+ PP F+ M+LP
Sbjct: 159 LAKGVQYTEPMRTSWSPPGYIRNRTAQENSKLRERLGILVEGDNCPPPIEHFQDMRLPSP 218
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
+++ L+ K IK PTPIQ+QG+P ALSGRD+IGIAFTGSGKTL F LP+L+ LE E KLP
Sbjct: 219 VLKYLKEKKIKLPTPIQLQGLPVALSGRDMIGIAFTGSGKTLAFSLPLLLLALEAEMKLP 278
Query: 215 FLPGEGPYGLIICPSRELARQTHD 238
F+ GEGP G+I+CPSRELARQT++
Sbjct: 279 FIQGEGPVGIIVCPSRELARQTYE 302
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD--- 64
RD+IGIAFTGSGKTL F LP+L+ LE E KLPF+ GEGP G+I+CPSRELARQT++
Sbjct: 246 RDMIGIAFTGSGKTLAFSLPLLLLALEAEMKLPFIQGEGPVGIIVCPSRELARQTYEGLV 305
Query: 65 IIQYYCAALPI--PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ CA L T L IGG+ M V+ KG
Sbjct: 306 AMALACAQSGKYPQLGTLLCIGGISMADQSHVMSKGFH 343
>gi|323454961|gb|EGB10830.1| hypothetical protein AURANDRAFT_21789 [Aureococcus anophagefferens]
Length = 510
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 102/154 (66%), Gaps = 3/154 (1%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
QS I ++ + ++ WR PR +S D D +RR ILV+GDDVP SF M
Sbjct: 14 QSAAEIATDARFTESLRVDWR-PRDAMSEADA--DKLRRKWCILVDGDDVPAPIKSFAGM 70
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
L L+ AL K I +PTPIQVQG+P AL+GRD+IGIAFTGSGKT+ F +P+++ LE
Sbjct: 71 GLERDLLDALGEKRITRPTPIQVQGMPVALAGRDMIGIAFTGSGKTVAFSVPLIVRALEA 130
Query: 210 ETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
E + P GEGP GL++CPSRELARQT +++ ++
Sbjct: 131 ERRSPLRAGEGPVGLVLCPSRELARQTWEVVDFF 164
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 7/97 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKT+ F +P+++ LE E + P GEGP GL++CPSRELARQT +++
Sbjct: 103 RDMIGIAFTGSGKTVAFSVPLIVRALEAERRSPLRAGEGPVGLVLCPSRELARQTWEVVD 162
Query: 68 YYCAALPIP-------LRTCLAIGGVPMNQSLDVIKK 97
++ A L LR+ IGG P LD +++
Sbjct: 163 FFMARLRGAGGRRGDVLRSACCIGGEPKGPQLDDLRR 199
>gi|294893610|ref|XP_002774558.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239879951|gb|EER06374.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 639
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
Query: 97 KGIQYND--PIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
KGI Y+ P W PR + ++ IR I V GDDV P SF+ M P+
Sbjct: 144 KGITYDMSMPNIAGWTLPRKYRQMTEEEAQAIRDKFFIEVNGDDVCPPIKSFKEMLFPQG 203
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ AL++KGI +PT IQ+QG+P AL GRD+IGIAFTGSGKTLVF +P ++ +E E + P
Sbjct: 204 ILEALKSKGISRPTQIQMQGLPEALLGRDLIGIAFTGSGKTLVFAIPAILRAMEMEMRAP 263
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGP+ L+I PSRELA+QTH++++YY + L
Sbjct: 264 VTDSEGPFCLLIAPSRELAQQTHEVVEYYASYL 296
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 11/104 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF +P ++ +E E + P EGP+ L+I PSRELA+QTH++++
Sbjct: 231 RDLIGIAFTGSGKTLVFAIPAILRAMEMEMRAPVTDSEGPFCLLIAPSRELAQQTHEVVE 290
Query: 68 YYCAALP-IP----------LRTCLAIGGVPMNQSLDVIKKGIQ 100
YY + L +P LR L IGG + + +++G+
Sbjct: 291 YYASYLTGLPSSRSRHRLPRLRCQLCIGGESLGRQAANVRRGVH 334
>gi|294933513|ref|XP_002780743.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
gi|239890799|gb|EER12538.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
Length = 634
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 2/153 (1%)
Query: 97 KGIQYND--PIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
KGI Y+ P W P+ + ++ IR I V GDDV P SF+ M P+
Sbjct: 139 KGITYDMSMPNIAGWTLPKKYRQMTEEEAQAIRDKFFIEVNGDDVCPPIKSFKDMLFPQG 198
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
++ AL++KGI +PT IQ+QG+P AL GRD+IGIAFTGSGKTLVF +P ++ +E E + P
Sbjct: 199 VLEALKSKGISRPTQIQMQGLPEALLGRDLIGIAFTGSGKTLVFAIPAILRAMEMEMRAP 258
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGP+ L+I PSRELA+QTH++++YY + L
Sbjct: 259 VADSEGPFCLLIAPSRELAQQTHEVVEYYASYL 291
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 11/104 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIAFTGSGKTLVF +P ++ +E E + P EGP+ L+I PSRELA+QTH++++
Sbjct: 226 RDLIGIAFTGSGKTLVFAIPAILRAMEMEMRAPVADSEGPFCLLIAPSRELAQQTHEVVE 285
Query: 68 YYCAALP----------IP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
YY + L +P LR L IGG + + +++G+
Sbjct: 286 YYASYLTGRPSSRSRHRLPRLRCQLCIGGESLGRQAANVRRGVH 329
>gi|403221898|dbj|BAM40030.1| helicase [Theileria orientalis strain Shintoku]
Length = 648
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 106/162 (65%), Gaps = 7/162 (4%)
Query: 86 VPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCS 145
VP+ Q +G+ Y I++ + P C ++P+ V +++R L I V G DVPP
Sbjct: 136 VPVKQR----SQGVVYEKSIESIYTIPSCYRNIPESVLNVVRDVLFIDVSGSDVPPPIVK 191
Query: 146 FRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG---SGKTLVFVLPI 202
F MKLP +++RAL K I +PT IQ+Q +PAAL GRD+IGI+ TG SGKT+VFV+P+
Sbjct: 192 FDHMKLPSAIMRALNDKRILEPTNIQMQALPAALLGRDVIGISSTGRTSSGKTIVFVIPM 251
Query: 203 LMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
+M E E +LP EGP+GL++CPSRELA Q ++++Y+
Sbjct: 252 VMQAWEMELRLPLKAFEGPFGLVVCPSRELASQITEVVKYFA 293
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 7/100 (7%)
Query: 8 RDIIGIAFTG---SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 64
RD+IGI+ TG SGKT+VFV+P++M E E +LP EGP+GL++CPSRELA Q +
Sbjct: 228 RDVIGISSTGRTSSGKTIVFVIPMVMQAWEMELRLPLKAFEGPFGLVVCPSRELASQITE 287
Query: 65 IIQYYCAALPI---PLRTCL-AIGGVPMNQSLDVIKKGIQ 100
+++Y+ + P CL IGG + + D ++ G+
Sbjct: 288 VVKYFARHVHKHGGPSLECLCVIGGSDIWRQKDALRDGVH 327
>gi|84995362|ref|XP_952403.1| RNA helicase [Theileria annulata strain Ankara]
gi|65302564|emb|CAI74671.1| RNA helicase, putative [Theileria annulata]
Length = 620
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 97/149 (65%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
K Y PI + ++ P L++ V D IR L I V GD VPP +F MKLP+ ++
Sbjct: 142 KATVYGSPIDSIYKIPFKYLAVDSNVVDSIRNALLIDVSGDQVPPPILNFEDMKLPKPIL 201
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+AL K I +PT IQ+Q +P+ L GRD+IG++ TG+GKTLVFV+P++M E E +LP
Sbjct: 202 KALNHKKIFEPTKIQMQALPSVLLGRDVIGVSSTGTGKTLVFVIPMIMQSWEIELRLPIE 261
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCA 245
EGP+GL+ICPSRELA Q DI +Y+
Sbjct: 262 SREGPFGLVICPSRELASQISDITKYFTG 290
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IG++ TG+GKTLVFV+P++M E E +LP EGP+GL+ICPSRELA Q DI +
Sbjct: 227 RDVIGVSSTGTGKTLVFVIPMIMQSWEIELRLPIESREGPFGLVICPSRELASQISDITK 286
Query: 68 YYCAAL-----PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y+ + P +C+ IGG + IK G+
Sbjct: 287 YFTGYIYNYGGPKLYCSCV-IGGTDIKDQEFTIKSGVH 323
>gi|242016149|ref|XP_002428698.1| predicted protein [Pediculus humanus corporis]
gi|212513369|gb|EEB15960.1| predicted protein [Pediculus humanus corporis]
Length = 513
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 95/158 (60%), Gaps = 13/158 (8%)
Query: 95 IKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPES 154
+ KGIQY DPIKTSW AP+CIL+L ++ H+ +R LRILVEG+D+PP F+ MK PE
Sbjct: 36 LAKGIQYADPIKTSWTAPKCILALGEKRHNRVRNKLRILVEGEDIPPPIKDFKGMKFPEP 95
Query: 155 LVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP 214
L+ AL+ +GI +PTPIQ+QG+P + R + + F LP
Sbjct: 96 LLVALQKRGIMRPTPIQIQGLPTVIWTRHDWHRVYRKREN--------ISFRSSTHNVLP 147
Query: 215 FLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
G LIICPSRELA+QTHDI QYYC +L F
Sbjct: 148 -----GTRSLIICPSRELAKQTHDIFQYYCKSLLESGF 180
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 46 GPYGLIICPSRELARQTHDIIQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
G LIICPSRELA+QTHDI QYYC +L +R CL IGGVP+++SL+VI +G+
Sbjct: 148 GTRSLIICPSRELAKQTHDIFQYYCKSLLESGFPEIRCCLGIGGVPVSESLEVIARGLH 206
>gi|71030480|ref|XP_764882.1| RNA helicase-1 [Theileria parva strain Muguga]
gi|68351838|gb|EAN32599.1| RNA helicase-1, putative [Theileria parva]
Length = 598
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 108/177 (61%), Gaps = 15/177 (8%)
Query: 83 IGGV--PMNQSLDVIK---KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGD 137
IG V +N +L +K K I Y PI + ++ P L++ V D +R L I V GD
Sbjct: 126 IGSVTGSINSALSPVKDSPKAIVYKSPIDSIYKIPSKYLTIDPNVVDSVRNALVIDVSGD 185
Query: 138 DVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIA--------- 188
VPP +F MKLP +++AL K I +PT IQ+Q +PA L GRD+IGI+
Sbjct: 186 QVPPPILTFEDMKLPRPILKALRHKKIFEPTKIQMQAMPAVLLGRDVIGISPTGTLTKFN 245
Query: 189 -FTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
F G+GKTLVFV+P++M E E +LP P EGP+GL+ICPSRELA Q +DI +Y+
Sbjct: 246 LFLGTGKTLVFVIPMIMQSWEIELRLPIEPREGPFGLVICPSRELASQIYDITKYFA 302
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 61/107 (57%), Gaps = 14/107 (13%)
Query: 8 RDIIGIA----------FTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 57
RD+IGI+ F G+GKTLVFV+P++M E E +LP P EGP+GL+ICPSRE
Sbjct: 230 RDVIGISPTGTLTKFNLFLGTGKTLVFVIPMIMQSWEIELRLPIEPREGPFGLVICPSRE 289
Query: 58 LARQTHDIIQYYCAALPIPLRTCL----AIGGVPMNQSLDVIKKGIQ 100
LA Q +DI +Y+ + R L IGG + IK G+
Sbjct: 290 LASQIYDITKYFAEYISKYDRPKLYCACVIGGTGIKDQEHSIKSGVH 336
>gi|255542020|ref|XP_002512074.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549254|gb|EEF50743.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 578
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 100/155 (64%)
Query: 93 DVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLP 152
D+I +D + T W+ P + + D I ++V+G D+P +F MK
Sbjct: 118 DMIGVASTGSDTLFTGWKPPLPYRRISKEKQDSIPEQCHVIVDGQDIPSPLINFEDMKFT 177
Query: 153 ESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETK 212
E +++ L+ KGI +PTPIQ+QG+P LSGRD+IG+ TGSGKTLV VLP++M L++E
Sbjct: 178 EPILQKLKVKGISQPTPIQMQGLPVILSGRDMIGVVSTGSGKTLVVVLPLIMIALQEEIM 237
Query: 213 LPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+P GEGP+GLIICPSRELA +T+ ++Q + ++
Sbjct: 238 MPIASGEGPFGLIICPSRELATRTYHLVQEFSISM 272
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 63/102 (61%)
Query: 91 SLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK 150
S+ + KGI + D + T W+ P + + D IR ++V+G D+P SF MK
Sbjct: 26 SVSELAKGIIFTDTLFTGWKPPLPYRRISKEKQDAIREECHVIVDGQDIPSPLISFEDMK 85
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGS 192
E +++ L+ KGI +PTPIQ+QG+P LSGRD+IG+A TGS
Sbjct: 86 FTEPILQKLKVKGISQPTPIQMQGLPVILSGRDMIGVASTGS 127
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 6/92 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+ TGSGKTLV VLP++M L++E +P GEGP+GLIICPSRELA +T+ +
Sbjct: 205 SGRDMIGVVSTGSGKTLVVVLPLIMIALQEEIMMPIASGEGPFGLIICPSRELATRTYHL 264
Query: 66 IQYYC-----AALPIPLRTCLAIGGVPMNQSL 92
+Q + A P LR+ L IG V + L
Sbjct: 265 VQEFSISMREAGYP-ELRSLLCIGVVDVKSQL 295
>gi|312379953|gb|EFR26085.1| hypothetical protein AND_08061 [Anopheles darlingi]
Length = 244
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/99 (66%), Positives = 79/99 (79%)
Query: 97 KGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
KGIQY DPIKTSW PR IL+ H+ IR NLRIL +G+DVPP CSFR MKLP++++
Sbjct: 107 KGIQYEDPIKTSWTPPRYILAKSISRHEKIRENLRILTDGEDVPPPLCSFREMKLPKAIL 166
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKT 195
A+ + IKKP+PIQVQGIPA L+GRD+IGIAFTGSGKT
Sbjct: 167 LAMAKRNIKKPSPIQVQGIPAVLAGRDLIGIAFTGSGKT 205
>gi|5679690|emb|CAB51742.1| RNA helicase-1 [Plasmodium falciparum]
Length = 386
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 81/104 (77%)
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
MK P+++++ L K IKKPT IQ+QG+P+ L GRDIIGIAFTGSGKT+VFVLP++M CLE
Sbjct: 1 MKFPKAILKGLRKKNIKKPTQIQMQGLPSILLGRDIIGIAFTGSGKTIVFVLPLIMKCLE 60
Query: 209 QETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
E + GEGP GLIICPSRELA QTH+II+Y+C L +F
Sbjct: 61 AEIRCKLEEGEGPIGLIICPSRELATQTHNIIKYFCEFLYKDNF 104
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIAFTGSGKT+VFVLP++M CLE E + GEGP GLIICPSRELA QTH+II+
Sbjct: 34 RDIIGIAFTGSGKTIVFVLPLIMKCLEAEIRCKLEEGEGPIGLIICPSRELATQTHNIIK 93
Query: 68 YYCAAL---PIP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
Y+C L P LR+ IGG+ + I+KGI
Sbjct: 94 YFCEFLYKDNFPTLRSLCMIGGISAYEQGREIQKGIH 130
>gi|412990376|emb|CCO19694.1| probable ATP-dependent RNA helicase DDX41 [Bathycoccus prasinos]
Length = 551
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 79/113 (69%)
Query: 136 GDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKT 195
G+ VP CSF M LP ++ L KGI KPT IQ+QGIP LSGRD+IGIA TGSGKT
Sbjct: 109 GNLVPMPSCSFLTMGLPNKILHTLRQKGIMKPTAIQMQGIPLILSGRDMIGIASTGSGKT 168
Query: 196 LVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALP 248
L FVLPIL + ++ ++P + GEGP LIICPSRELARQTH+++ Y P
Sbjct: 169 LAFVLPILTSVMIEQLRMPLVRGEGPLSLIICPSRELARQTHEVLLLYSQKRP 221
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL FVLPIL + ++ ++P + GEGP LIICPSRELARQTH+++
Sbjct: 155 RDMIGIASTGSGKTLAFVLPILTSVMIEQLRMPLVRGEGPLSLIICPSRELARQTHEVLL 214
Query: 68 YYCAALPIPLRTC------LAIGGVPMNQ 90
Y P + L IGG+ + +
Sbjct: 215 LYSQKRPKEQKKSESISVILCIGGLNVQE 243
>gi|145493274|ref|XP_001432633.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399746|emb|CAK65236.1| unnamed protein product [Paramecium tetraurelia]
Length = 566
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 95/145 (65%), Gaps = 2/145 (1%)
Query: 109 WRAPRCILSLPDQVH-DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKP 167
WR P+ L DQ D I + I++EG+D PP SF+ +++ +++ L IKKP
Sbjct: 82 WR-PKKKQRLWDQYKIDKILKKYSIMIEGNDPPPPIKSFQDLRVDHRILKILSKMKIKKP 140
Query: 168 TPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIIC 227
TPIQ+QG+PA L GRDIIG+A +G GKTLVF+LP L+ C+E+E K+P + GEGP+ LI+
Sbjct: 141 TPIQMQGLPAVLMGRDIIGVAPSGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALILL 200
Query: 228 PSRELARQTHDIIQYYCAALPIGSF 252
PS ELA T+++ + YC F
Sbjct: 201 PSHELAILTYELAKQYCQKFQKKGF 225
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIG+A +G GKTLVF+LP L+ C+E+E K+P + GEGP+ LI+ PS ELA T+++ +
Sbjct: 155 RDIIGVAPSGQGKTLVFLLPALLQCIEEEMKMPVIRGEGPFALILLPSHELAILTYELAK 214
Query: 68 YYCAALP---IPLRTC-LAIGGVPMNQSLDVIKKGIQ 100
YC P C L IGG+ M+ L I+ G+
Sbjct: 215 QYCQKFQKKGFPAIHCLLGIGGMDMSSQLQSIRNGVH 251
>gi|402593119|gb|EJW87046.1| ATP-dependent RNA helicase [Wuchereria bancrofti]
Length = 438
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 74/93 (79%)
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
MK P +++AL K I PT IQ+QGIP ALSGRD+IGIA TGSGKTL F LP++MFCLE
Sbjct: 1 MKFPPPVIKALRDKKIICPTVIQMQGIPVALSGRDMIGIASTGSGKTLTFALPLIMFCLE 60
Query: 209 QETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 241
QE LPF GEGPYGLII PSRELA+Q HD+I+
Sbjct: 61 QEVSLPFRHGEGPYGLIIVPSRELAKQIHDVIE 93
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 5/100 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F LP++MFCLEQE LPF GEGPYGLII PSRELA+Q HD+
Sbjct: 32 SGRDMIGIASTGSGKTLTFALPLIMFCLEQEVSLPFRHGEGPYGLIIVPSRELAKQIHDV 91
Query: 66 IQYY----CAALPIP-LRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ C P LR L IGG+P+++ V ++G+
Sbjct: 92 IEKLFENICDGTKFPRLRVGLCIGGLPISEQAKVFERGVH 131
>gi|145501031|ref|XP_001436498.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403638|emb|CAK69101.1| unnamed protein product [Paramecium tetraurelia]
Length = 553
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 97/149 (65%), Gaps = 2/149 (1%)
Query: 105 IKTSWRAPRCILSLPDQVH-DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKG 163
+K+ WR P+ L DQ D I + I++EG+D PP SF+ +++ +++ L
Sbjct: 69 VKSKWR-PKKKQRLWDQYKIDKILKKYSIMIEGNDPPPPIKSFQDLRVDHRILKILSKMK 127
Query: 164 IKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYG 223
IKKPTPIQ+QG+P L GRDIIG+A +G GKTLVF+LP L+ C++++ K+P + GEGP+
Sbjct: 128 IKKPTPIQMQGLPTVLMGRDIIGVAPSGQGKTLVFLLPALLQCVDEQMKMPIIRGEGPFA 187
Query: 224 LIICPSRELARQTHDIIQYYCAALPIGSF 252
LI+ PS ELA T+++ + YC F
Sbjct: 188 LILLPSHELAILTYELAKQYCQKFQKKGF 216
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIG+A +G GKTLVF+LP L+ C++++ K+P + GEGP+ LI+ PS ELA T+++ +
Sbjct: 146 RDIIGVAPSGQGKTLVFLLPALLQCVDEQMKMPIIRGEGPFALILLPSHELAILTYELAK 205
Query: 68 YYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
YC + L IGG+ M+ L IK G+
Sbjct: 206 QYCQKFQKKGFPGIHCLLGIGGMDMSSQLQSIKNGVH 242
>gi|399217929|emb|CCF74816.1| unnamed protein product [Babesia microti strain RI]
Length = 638
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 89/139 (64%), Gaps = 6/139 (4%)
Query: 109 WRAPRCILSLP-DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKP 167
W P+ + D++ + RN I + G +VPP SFR MK P+ +++ L K IK P
Sbjct: 155 WTLPKKYKKMTLDEIEKVRARNY-IDINGTNVPPPIRSFRDMKFPKPILKYLAKKNIKTP 213
Query: 168 TPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIIC 227
T IQ+Q IPA L GRDII IA+TGSGK++VF+LP++M E E ++ L GEGP+ L++C
Sbjct: 214 TQIQMQAIPAVLQGRDIIAIAYTGSGKSMVFILPMIMVAWEYELRMRILKGEGPFALVLC 273
Query: 228 PSRELARQT----HDIIQY 242
PSRELA QT DI Y
Sbjct: 274 PSRELASQTCSIVDDITHY 292
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT----H 63
RDII IA+TGSGK++VF+LP++M E E ++ L GEGP+ L++CPSRELA QT
Sbjct: 228 RDIIAIAYTGSGKSMVFILPMIMVAWEYELRMRILKGEGPFALVLCPSRELASQTCSIVD 287
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
DI Y + L+T IGGV + D I +GI
Sbjct: 288 DITHYIYDYTGLRLKTLCLIGGVNLFDQSDKISRGIH 324
>gi|167533981|ref|XP_001748669.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772910|gb|EDQ86556.1| predicted protein [Monosiga brevicollis MX1]
Length = 592
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 90/161 (55%), Gaps = 26/161 (16%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
+S++ + KGI Y +P+KTSWR PR S P C +
Sbjct: 116 KSVEELAKGISYTEPLKTSWRPPRRQYS-----------------------PTCAPLSRL 152
Query: 150 KLPESLVRALEAKG---IKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFC 206
+ + A +G + + G+P ALSGRD+IGIAFTGSGKTL F LP LM
Sbjct: 153 EACPAHSAAFGRQGYCQTNSNSDARFVGVPVALSGRDMIGIAFTGSGKTLAFSLPALMLA 212
Query: 207 LEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
L+QE K+PF+ GEGP+ +I+ PSRELARQT+D++ + AL
Sbjct: 213 LDQEIKMPFVGGEGPFAIIMAPSRELARQTYDVLIEFTDAL 253
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL F LP LM L+QE K+PF+ GEGP+ +I+ PSRELARQT+D+
Sbjct: 186 SGRDMIGIAFTGSGKTLAFSLPALMLALDQEIKMPFVGGEGPFAIIMAPSRELARQTYDV 245
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + AL L L IGG+ M + ++ + G+
Sbjct: 246 LIEFTDALAKEGYPQLGIMLCIGGLSMQEVMERCQNGVH 284
>gi|156343647|ref|XP_001621066.1| hypothetical protein NEMVEDRAFT_v1g248720 [Nematostella vectensis]
gi|156206666|gb|EDO28966.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 65/81 (80%)
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
MK P ++ AL+ KGI PTPIQVQG+PA L+GRD+IGIAFTGSGKTLVF LPI+MF LE
Sbjct: 249 MKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPIIMFSLE 308
Query: 209 QETKLPFLPGEGPYGLIICPS 229
QE +PF EGPYG+I+ PS
Sbjct: 309 QEKAMPFQRNEGPYGMIVVPS 329
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 40/48 (83%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPS 55
RD+IGIAFTGSGKTLVF LPI+MF LEQE +PF EGPYG+I+ PS
Sbjct: 282 RDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPS 329
>gi|326488617|dbj|BAJ97920.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 4/99 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+G+IICPSRELA+QT+D+
Sbjct: 101 SGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMLMPIVPGEGPFGMIICPSRELAKQTYDV 160
Query: 66 IQYYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
I + L +R L IGG+ M LDV+KKG+
Sbjct: 161 IDMFLTPLKQAGFPEIRPLLCIGGIDMRTQLDVVKKGVH 199
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 66/86 (76%)
Query: 167 PTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLII 226
P P + +G P LSGRD+IGIAFTGSGKTLVFVLP++M L++E +P +PGEGP+G+II
Sbjct: 88 PRPSRCRGFPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMLMPIVPGEGPFGMII 147
Query: 227 CPSRELARQTHDIIQYYCAALPIGSF 252
CPSRELA+QT+D+I + L F
Sbjct: 148 CPSRELAKQTYDVIDMFLTPLKQAGF 173
>gi|146180580|ref|XP_001021192.2| Helicase conserved C-terminal domain containing protein
[Tetrahymena thermophila]
gi|146144450|gb|EAS00947.2| Helicase conserved C-terminal domain containing protein
[Tetrahymena thermophila SB210]
Length = 602
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 24/177 (13%)
Query: 94 VIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRL----- 148
+I++ Q + +KT+WR P+ ++ + + + +L+EG + PP SF +
Sbjct: 68 LIERKEQIKERVKTTWRIPKAYRTVTQREIQKVLKKYSVLLEGQNTPPPIQSFEVNLLIA 127
Query: 149 -------------MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKT 195
MK P+ ++ L+ K +KKPTPIQ+ G+P L GRD+IGIA TG GKT
Sbjct: 128 QFSHQYSLIVLKEMKFPKKIIAILKEKKVKKPTPIQMVGLPTVLLGRDMIGIAPTGQGKT 187
Query: 196 LVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGSF 252
+VF+LP L+ +E E +P GEGP +II PS T+++ YY L +
Sbjct: 188 IVFLLPALVMAIEHEMNMPLFRGEGPLAIIIVPS------TYELACYYSQKLQEAGY 238
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TG GKT+VF+LP L+ +E E +P GEGP +II PS T+++
Sbjct: 174 RDMIGIAPTGQGKTIVFLLPALVMAIEHEMNMPLFRGEGPLAIIIVPS------TYELAC 227
Query: 68 YYCAALPIP----LRTCLAIGGVPMNQSLDVIKKGIQ 100
YY L +R L+IGG+ M Q + +++G+
Sbjct: 228 YYSQKLQEAGYPQIRCSLSIGGMDMMQQIAQVREGVH 264
>gi|291000746|ref|XP_002682940.1| predicted protein [Naegleria gruberi]
gi|284096568|gb|EFC50196.1| predicted protein [Naegleria gruberi]
Length = 483
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 89/140 (63%), Gaps = 5/140 (3%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPT 168
W P +L + D+IR+N I V+G PP +F +KLP+ L++ L K I+ PT
Sbjct: 1 WTVPEYYRNLTVEELDLIRKNFGIQVDGVCAPPPILTFEHLKLPKCLLKLLLEKNIETPT 60
Query: 169 PIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-----GEGPYG 223
PIQ+QG+P L GRD+IGIAFTGSGKTLVF LPI+M+ E P GP G
Sbjct: 61 PIQMQGLPCLLEGRDVIGIAFTGSGKTLVFSLPIIMYSYLNEHLYATRPKSIRRNNGPLG 120
Query: 224 LIICPSRELARQTHDIIQYY 243
LI+CP+RELA+QT + I+Y+
Sbjct: 121 LILCPNRELAKQTFEFIEYF 140
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 14/93 (15%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-----GEGPYGLIICPSRELARQT 62
RD+IGIAFTGSGKTLVF LPI+M+ E P GP GLI+CP+RELA+QT
Sbjct: 74 RDVIGIAFTGSGKTLVFSLPIIMYSYLNEHLYATRPKSIRRNNGPLGLILCPNRELAKQT 133
Query: 63 HDIIQYYCAAL---------PIPLRTCLAIGGV 86
+ I+Y+ + L L +GG+
Sbjct: 134 FEFIEYFFNGINEQEKKRSQTFKLNVSLCMGGI 166
>gi|448104053|ref|XP_004200189.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
gi|359381611|emb|CCE82070.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
Length = 900
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 5/161 (3%)
Query: 93 DVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKL 151
DV I Y K ++ P+ I + + D++R +L I V+G P + + L
Sbjct: 251 DVNHSEIDYKPFRKDFYKEPKEIADMTEAEIDLLRLDLGGIRVKGSSPPRPISKWSHLGL 310
Query: 152 PESLVRALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P S++ L+ K G P+PIQ Q +PA + GRDIIG+A TGSGKTL F LP+L +Q
Sbjct: 311 PNSIMTILKEKLGYTSPSPIQSQALPAIMKGRDIIGVAKTGSGKTLSFSLPLLRHVQDQT 370
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
P LPG+GP GLI+ P+RELA Q H I ++ L I +
Sbjct: 371 ---PLLPGDGPIGLIMTPTRELASQIHKEISHFSKRLNIST 408
Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIG+A TGSGKTL F LP+L +Q P LPG+GP GLI+ P+RELA Q H I
Sbjct: 342 RDIIGVAKTGSGKTLSFSLPLLRHVQDQT---PLLPGDGPIGLIMTPTRELASQIHKEIS 398
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ L I TC GG + + +KKG Q
Sbjct: 399 HFSKRLNI--STCCCFGGSSIEPQIGELKKGSQ 429
>gi|195565659|ref|XP_002106416.1| GD16140 [Drosophila simulans]
gi|194203792|gb|EDX17368.1| GD16140 [Drosophila simulans]
Length = 800
Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + QV DI RR L I V G+++P SF LP ++ ++ +G KPT IQ
Sbjct: 207 PNTLAKSEQQVADI-RRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQ 265
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
QG P ALSGRD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RE
Sbjct: 266 SQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRE 322
Query: 232 LARQTHDIIQYY 243
LA+Q +++ Y
Sbjct: 323 LAQQIQSVVRDY 334
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +
Sbjct: 274 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRELAQQIQSV 330
Query: 66 IQYYCAALPIPLRTCLAIGG---VPMNQSLD 93
++ Y +R GG VP + LD
Sbjct: 331 VRDYGHLCKPEIRHTCIFGGSSKVPQARDLD 361
>gi|194763631|ref|XP_001963936.1| GF20995 [Drosophila ananassae]
gi|190618861|gb|EDV34385.1| GF20995 [Drosophila ananassae]
Length = 996
Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + QV D+ RR L I V G+D+P +F LP ++ ++ +G KPT IQ
Sbjct: 214 PNTLAKTEQQVADM-RRELEITVSGNDLPHPVANFEECSLPAHVIDEMKRQGFTKPTAIQ 272
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
QG P ALSGRD++GIA TGSGKTL ++LP ++ Q P L GEGP L++ P+RE
Sbjct: 273 SQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PILRGEGPVALVLAPTRE 329
Query: 232 LARQTHDIIQYY 243
LA+Q +++ Y
Sbjct: 330 LAQQIQSVVRDY 341
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P L GEGP L++ P+RELA+Q +
Sbjct: 281 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PILRGEGPVALVLAPTRELAQQIQSV 337
Query: 66 IQYYCAALPIPLR-TCLAIGGVPMNQSLDVIKKGIQ 100
++ Y +R TC+ G + Q+ D +++G++
Sbjct: 338 VRDYGHLCKPEIRHTCIFGGSSKVPQARD-LERGVE 372
>gi|195480298|ref|XP_002101215.1| GE17497 [Drosophila yakuba]
gi|194188739|gb|EDX02323.1| GE17497 [Drosophila yakuba]
Length = 962
Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats.
Identities = 58/132 (43%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + QV DI RR L I V G+++P SF LP ++ ++ +G KPT IQ
Sbjct: 208 PNTLAKSEQQVADI-RRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQ 266
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
QG P ALSGRD++GIA TGSGKTL ++LP ++ Q P L GEGP L++ P+RE
Sbjct: 267 SQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PILRGEGPIALVLAPTRE 323
Query: 232 LARQTHDIIQYY 243
LA+Q +++ Y
Sbjct: 324 LAQQIQSVVRDY 335
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P L GEGP L++ P+RELA+Q +
Sbjct: 275 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PILRGEGPIALVLAPTRELAQQIQSV 331
Query: 66 IQYYCAALPIPLRTCLAIGG---VPMNQSLD 93
++ Y +R GG VP + LD
Sbjct: 332 VRDYGHLCKPEIRHTCIFGGSSKVPQARDLD 362
>gi|198470572|ref|XP_001355346.2| GA10556 [Drosophila pseudoobscura pseudoobscura]
gi|198145515|gb|EAL32403.2| GA10556 [Drosophila pseudoobscura pseudoobscura]
Length = 939
Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 3/128 (2%)
Query: 116 LSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGI 175
L++ +Q +RR L I V G+D+P +F LP ++ ++ +G KPT IQ QG
Sbjct: 210 LNMSEQAVAELRRELEITVSGNDLPHPVANFEECSLPAHVIDEMKRQGFTKPTAIQSQGW 269
Query: 176 PAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
P ALSGRD++GIA TGSGKTL ++LP ++ +Q P L GEGP L++ P+RELA+Q
Sbjct: 270 PIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGKQP---PILRGEGPIALVLAPTRELAQQ 326
Query: 236 THDIIQYY 243
+++ Y
Sbjct: 327 IQSVVRDY 334
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ +Q P L GEGP L++ P+RELA+Q +
Sbjct: 274 SGRDLVGIAQTGSGKTLAYMLPAIVHIGKQP---PILRGEGPIALVLAPTRELAQQIQSV 330
Query: 66 IQYYCAALPIPLR-TCLAIGGVPMNQSLDVIKKGIQ 100
++ Y +R TC+ G + Q+ D +++G++
Sbjct: 331 VRDYGHLCQPEIRHTCIFGGSSKVPQARD-LERGVE 365
>gi|399219035|emb|CCF75922.1| unnamed protein product [Babesia microti strain RI]
Length = 635
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 83/141 (58%), Gaps = 9/141 (6%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPT 168
WR +C + D+ I R + I V+G +PP S+ KLP+ L+ A++ G KPT
Sbjct: 190 WR-EKCRDEMNDRDWMIFREDYSICVKGGRIPPPMRSWDESKLPKELLEAVKVAGYNKPT 248
Query: 169 PIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGL 224
PIQ+Q IP AL RD+IGIA TGSGKT FVLP+L + LP L E GPY L
Sbjct: 249 PIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYV----KSLPLLDDETGQDGPYSL 304
Query: 225 IICPSRELARQTHDIIQYYCA 245
++ PSRELA Q +D + + A
Sbjct: 305 VLAPSRELAIQIYDETRKFAA 325
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + LP L E GPY L++ PSRELA Q +
Sbjct: 262 RDLIGIAETGSGKTAAFVLPMLAYV----KSLPLLDDETGQDGPYSLVLAPSRELAIQIY 317
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
D + + A R + +GG + +++G +
Sbjct: 318 DETRKFAAYC--ECRAIVIVGGRSVESQAFELRRGTE 352
>gi|195355988|ref|XP_002044465.1| GM11962 [Drosophila sechellia]
gi|194131630|gb|EDW53672.1| GM11962 [Drosophila sechellia]
Length = 946
Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + QV DI RR L I V G+++P SF LP ++ ++ +G KPT IQ
Sbjct: 207 PNTLAKSEQQVADI-RRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQ 265
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
QG P ALSGRD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RE
Sbjct: 266 SQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRE 322
Query: 232 LARQTHDIIQYY 243
LA+Q +++ Y
Sbjct: 323 LAQQIQSVVRDY 334
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +
Sbjct: 274 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRELAQQIQSV 330
Query: 66 IQYYCAALPIPLRTCLAIGG---VPMNQSLD 93
++ Y +R GG VP + LD
Sbjct: 331 VRDYGHLCKPEIRHTCIFGGSSKVPQARDLD 361
>gi|194897089|ref|XP_001978588.1| GG17597 [Drosophila erecta]
gi|190650237|gb|EDV47515.1| GG17597 [Drosophila erecta]
Length = 955
Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 4/132 (3%)
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + QV DI RR L I V G+++P SF LP ++ ++ +G KPT IQ
Sbjct: 210 PNTLAKSEQQVADI-RRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQ 268
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
QG P ALSGRD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RE
Sbjct: 269 SQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRE 325
Query: 232 LARQTHDIIQYY 243
LA+Q +++ Y
Sbjct: 326 LAQQIQSVVRDY 337
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +
Sbjct: 277 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRELAQQIQSV 333
Query: 66 IQYYCAALPIPLRTCLAIGG---VPMNQSLD 93
++ Y +R GG VP + LD
Sbjct: 334 VRDYGHLCKPEIRHTCIFGGSSKVPQARDLD 364
>gi|260826097|ref|XP_002608002.1| hypothetical protein BRAFLDRAFT_74954 [Branchiostoma floridae]
gi|229293352|gb|EEN64012.1| hypothetical protein BRAFLDRAFT_74954 [Branchiostoma floridae]
Length = 430
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 64/94 (68%), Gaps = 14/94 (14%)
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
MK P ++ AL+ +GI PTPIQ+QG+PA LSGRD+IGIAFTGSGKTL
Sbjct: 1 MKFPRGVIHALKKRGIHHPTPIQIQGLPAILSGRDMIGIAFTGSGKTL------------ 48
Query: 209 QETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 242
+LPF +GPY LIICPSRELARQTH I +
Sbjct: 49 --KRLPFTKNDGPYSLIICPSRELARQTHQFITH 80
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 55/106 (51%), Gaps = 25/106 (23%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIAFTGSGKTL +LPF +GPY LIICPSRELARQTH
Sbjct: 32 SGRDMIGIAFTGSGKTL--------------KRLPFTKNDGPYSLIICPSRELARQTHQF 77
Query: 66 IQY--------YCAALPI---PLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + Y PI +RT L IGG + K+G+
Sbjct: 78 ITHNMISRSDEYHFLYPIGMPAMRTMLCIGGESAKDQFEQSKRGVH 123
>gi|85682863|gb|ABC73407.1| CG10777 [Drosophila miranda]
Length = 346
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 3/128 (2%)
Query: 116 LSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGI 175
L++ +Q +RR L I V G+D+P +F LP ++ ++ +G KPT IQ QG
Sbjct: 124 LNMSEQAVAELRRELEITVSGNDLPHPVANFEECSLPAHVIDEMKRQGFTKPTAIQSQGW 183
Query: 176 PAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
P ALSGRD++GIA TGSGKTL ++LP ++ +Q P L GEGP L++ P+RELA+Q
Sbjct: 184 PIALSGRDLVGIAQTGSGKTLAYMLPAIVHISKQP---PILRGEGPIALVLAPTRELAQQ 240
Query: 236 THDIIQYY 243
+++ Y
Sbjct: 241 IQSVVRDY 248
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++LP ++ +Q P L GEGP L++ P+RELA+Q +++
Sbjct: 190 RDLVGIAQTGSGKTLAYMLPAIVHISKQP---PILRGEGPIALVLAPTRELAQQIQSVVR 246
Query: 68 YYCAALPIPLR-TCLAIGGVPMNQSLDVIKKGIQ 100
Y +R TC+ G + Q+ D +++G++
Sbjct: 247 DYGHLCQPEIRHTCIFGGSSKVPQARD-LERGVE 279
>gi|448100355|ref|XP_004199330.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
gi|359380752|emb|CCE82993.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
Length = 900
Score = 109 bits (273), Expect = 9e-22, Method: Composition-based stats.
Identities = 64/161 (39%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 93 DVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKL 151
DV I Y K ++ P+ I + + D++R +L I V+G P + + L
Sbjct: 251 DVNHSEIDYKPFRKDFYKEPKEIADMTEAEVDLMRLDLGGIRVKGSSPPRPISKWSHLGL 310
Query: 152 PESLVRALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
P S++ L+ K P+PIQ Q +PA + GRDIIG+A TGSGKTL F LP+L +Q
Sbjct: 311 PNSIMTILKEKLAYNSPSPIQSQALPAIMKGRDIIGVAKTGSGKTLSFSLPLLRHVQDQP 370
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
P LPG+GP GLI+ P+RELA Q H I ++ L I +
Sbjct: 371 ---PLLPGDGPIGLIMTPTRELASQIHKEISHFSKRLNIST 408
Score = 83.6 bits (205), Expect = 8e-14, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIG+A TGSGKTL F LP+L +Q P LPG+GP GLI+ P+RELA Q H I
Sbjct: 342 RDIIGVAKTGSGKTLSFSLPLLRHVQDQP---PLLPGDGPIGLIMTPTRELASQIHKEIS 398
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ L I TC GG + + +KKG Q
Sbjct: 399 HFSKRLNI--STCCCFGGSSIEPQIGELKKGSQ 429
>gi|443706339|gb|ELU02447.1| hypothetical protein CAPTEDRAFT_155002 [Capitella teleta]
Length = 806
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 93 DVIKKGIQYNDPIKTSWRAPRCILSL-PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKL 151
D+ I+Y K + I SL P++VHD+ R +L I V G P SF +
Sbjct: 161 DIDHHEIEYEKFTKNFYDPHPEISSLTPEKVHDL-RNSLGIKVSGIMPPHPVSSFPHFQF 219
Query: 152 PESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQET 211
E+L++++ G +PTPIQ QGIP LSGRDIIGIA TGSGKT F+ P+L+ ++Q+
Sbjct: 220 DENLMKSIRKAGYTQPTPIQAQGIPIGLSGRDIIGIAKTGSGKTAAFIWPLLVHIMDQK- 278
Query: 212 KLPFLPGEGPYGLIICPSRELARQ 235
P PG+GP GLI P+REL++Q
Sbjct: 279 --PLKPGDGPIGLICAPTRELSQQ 300
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q+ P PG+GP GLI P+REL++Q +
Sbjct: 248 SGRDIIGIAKTGSGKTAAFIWPLLVHIMDQK---PLKPGDGPIGLICAPTRELSQQIYQE 304
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + I + A GG M + IK P I+ P ++ D+
Sbjct: 305 AKKFGKVYNI--KVVCAYGGGSMWEQ-------------IKACEECPEIIVCTPGRMIDL 349
Query: 126 IRRNLRILV 134
+R+ L+
Sbjct: 350 VRKKATNLL 358
>gi|222639930|gb|EEE68062.1| hypothetical protein OsJ_26071 [Oryza sativa Japonica Group]
Length = 938
Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/123 (45%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+NL + V G DVP ++ L L+ ++ G +KP PIQ Q +P +SGRD IG
Sbjct: 277 RKNLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIG 336
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q H I+ + +
Sbjct: 337 IAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIHSDIKKFAKS 393
Query: 247 LPI 249
L I
Sbjct: 394 LGI 396
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q H
Sbjct: 330 SGRDCIGIAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIHSD 386
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + +L I C+AI GG + Q + +K+G +
Sbjct: 387 IKKFAKSLGI---NCVAIYGGSGVAQQISELKRGAE 419
>gi|143456125|sp|Q0J7Y8.2|RH45_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 45
Length = 947
Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/123 (45%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+NL + V G DVP ++ L L+ ++ G +KP PIQ Q +P +SGRD IG
Sbjct: 268 RKNLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIG 327
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q H I+ + +
Sbjct: 328 IAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIHSDIKKFAKS 384
Query: 247 LPI 249
L I
Sbjct: 385 LGI 387
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q H
Sbjct: 321 SGRDCIGIAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIHSD 377
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + +L I C+AI GG + Q + +K+G +
Sbjct: 378 IKKFAKSLGI---NCVAIYGGSGVAQQISELKRGAE 410
>gi|18857967|ref|NP_572424.1| CG10777 [Drosophila melanogaster]
gi|7290853|gb|AAF46295.1| CG10777 [Drosophila melanogaster]
gi|16648356|gb|AAL25443.1| LD32873p [Drosophila melanogaster]
gi|220947598|gb|ACL86342.1| CG10777-PB [synthetic construct]
Length = 945
Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/118 (44%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
IRR L I V G+++P SF LP ++ ++ +G KPT IQ QG P ALSGRD++
Sbjct: 219 IRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLV 278
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +++ Y
Sbjct: 279 GIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRELAQQIQSVVRDY 333
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +
Sbjct: 273 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRELAQQIQSV 329
Query: 66 IQYYCAALPIPLRTCLAIGG---VPMNQSLD 93
++ Y +R GG VP + LD
Sbjct: 330 VRDYGHLCKPEIRHTCIFGGSSKVPQARDLD 360
>gi|301612200|ref|XP_002935570.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Xenopus (Silurana)
tropicalis]
Length = 943
Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/119 (44%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ ++ R L + V G P C SF E L+ + +PTPIQ QG+P A
Sbjct: 227 PQQITEL-RHKLNLRVSGAAPPRLCSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 285
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ PIL+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 286 LSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKE---LQPGDGPIAVIVCPTRELCQQIH 341
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ PIL+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 287 SGRDMIGIAKTGSGKTAAFIWPILVHIMDQKE---LQPGDGPIAVIVCPTRELCQQIHSE 343
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 344 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 376
>gi|163915660|gb|AAI57684.1| LOC100135374 protein [Xenopus (Silurana) tropicalis]
Length = 898
Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/119 (44%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ ++ R L + V G P C SF E L+ + +PTPIQ QG+P A
Sbjct: 182 PQQITEL-RHKLNLRVSGAAPPRLCSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 240
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ PIL+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 241 LSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKE---LQPGDGPIAVIVCPTRELCQQIH 296
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ PIL+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 242 SGRDMIGIAKTGSGKTAAFIWPILVHIMDQKE---LQPGDGPIAVIVCPTRELCQQIHSE 298
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 299 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 331
>gi|320166884|gb|EFW43783.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 876
Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
IQY + K + A I L D +RR L++ V G +VP C SF L+
Sbjct: 244 AIQYREFEKDFYSAHSDISGLDPLEVDSLRRKLQLRVSGSNVPSPCVSFGHFGFDSPLMA 303
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
A+ G +PTPIQ Q +P LSGRDIIGIA TGSGKT F+ P+L+ ++Q+
Sbjct: 304 AISKHGYTQPTPIQAQAVPVGLSGRDIIGIAKTGSGKTAAFLWPMLVHIMDQDE---LDV 360
Query: 218 GEGPYGLIICPSRELARQTHD 238
GEGP G+I+ P+REL +Q ++
Sbjct: 361 GEGPIGVIVAPTRELCQQIYN 381
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 10/132 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q+ GEGP G+I+ P+REL +Q ++
Sbjct: 326 SGRDIIGIAKTGSGKTAAFLWPMLVHIMDQDE---LDVGEGPIGVIVAPTRELCQQIYNE 382
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ LR GG + V+++G++ R I L D++ ++
Sbjct: 383 ATKFGRVY--GLRVAAIYGGESKYEQSKVLQQGVEI-----LVATPGRLIEMLKDKLTNM 435
Query: 126 IRRNLRILVEGD 137
+R +L E D
Sbjct: 436 LRATFLVLDEAD 447
>gi|159478699|ref|XP_001697438.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274317|gb|EDP00100.1| predicted protein [Chlamydomonas reinhardtii]
Length = 515
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Query: 103 DPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACC---SFRLMKLPESLVRAL 159
+P+ +W+ +LSL D IR+ L++ VEG + A SF M L ++V +
Sbjct: 69 EPVFNTWQPTSRVLSLSDDTIAEIRQRLKVTVEGTEDDKAASPIESFAEMNLHPNIVADI 128
Query: 160 EAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE 219
+ + PTPIQ QG+P ALSGRDI+G A TGSGKT F +P++ CL Q+ P G+
Sbjct: 129 QHHKYETPTPIQAQGLPIALSGRDILGCAETGSGKTASFSIPMIQHCLNQQ---PLRAGD 185
Query: 220 GPYGLIICPSRELARQTHDIIQYYC 244
GP L++ P+RELA+Q ++ +
Sbjct: 186 GPMALVLAPTRELAQQIEREVKAFS 210
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDI+G A TGSGKT F +P++ CL Q+ P G+GP L++ P+RELA+Q
Sbjct: 149 SGRDILGCAETGSGKTASFSIPMIQHCLNQQ---PLRAGDGPMALVLAPTRELAQQIERE 205
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + + +RT + +GGVPM++ ++ G++
Sbjct: 206 VKAFSRSSGRSVRTSIVVGGVPMHEQRHDLRNGVE 240
>gi|427788695|gb|JAA59799.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 870
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y + K + I +L D D +R L + V G P SF + ES+++A
Sbjct: 224 IEYKEFTKNFYVEHEEIAALSDAEVDQLRAKLGVKVTGAIPPKPVTSFGHLGFDESMLKA 283
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +P+PIQ QG+P ALSGRD+IGIA TGSGKT F+ P+L ++Q PG
Sbjct: 284 IRKAEYTQPSPIQAQGVPVALSGRDMIGIAKTGSGKTAAFIWPLLTHIMDQRE---LAPG 340
Query: 219 EGPYGLIICPSRELARQTH 237
EGP GLI+ P+RELA+Q +
Sbjct: 341 EGPIGLILAPTRELAQQIY 359
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 63
+ RD+IGIA TGSGKT F+ P+L ++Q PGEGP GLI+ P+RELA+Q +
Sbjct: 305 SGRDMIGIAKTGSGKTAAFIWPLLTHIMDQRE---LAPGEGPIGLILAPTRELAQQIY 359
>gi|383857449|ref|XP_003704217.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Megachile
rotundata]
Length = 774
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/139 (42%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
IQY K + I SL Q D +R+ L I V G P SF ++L++A
Sbjct: 210 IQYESFEKNFYNVHDEIASLSKQQIDDLRKTLGIKVSGPSPPNPVTSFGHFGFDDALIKA 269
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +PAALSGRDIIGIA TGSGKT F+ P+L+ ++Q G
Sbjct: 270 IRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAG 326
Query: 219 EGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL++Q +
Sbjct: 327 DGPIGLILAPTRELSQQIY 345
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q G+GP GLI+ P+REL++Q +
Sbjct: 291 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAGDGPIGLILAPTRELSQQIYQE 347
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 348 ARKFGKVYNIQVCCCYG-GGSKWEQS 372
>gi|348509262|ref|XP_003442169.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oreochromis
niloticus]
Length = 909
Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R L + V G P C SF E L+ + +PTPIQ QG+P ALSGRD+I
Sbjct: 234 LRHKLNLRVSGAAPPKPCTSFAHFNFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMI 293
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
GIA TGSGKT F+ P+L+ ++Q+ PGEGP +I+CP+REL +Q H
Sbjct: 294 GIAKTGSGKTAAFIWPMLVHIMDQKE---LEPGEGPIAVIVCPTRELCQQIH 342
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PGEGP +I+CP+REL +Q H
Sbjct: 288 SGRDMIGIAKTGSGKTAAFIWPMLVHIMDQKE---LEPGEGPIAVIVCPTRELCQQIHAE 344
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 345 CKRFGKAY--SLRSVAVYGGGSMWEQAKALQEGAE 377
>gi|432867546|ref|XP_004071236.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oryzias latipes]
Length = 903
Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R+ L + V G P C SF E L+ + +PTPIQ QG+P ALSGRD+I
Sbjct: 233 LRQKLNLRVSGAAPPKLCTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMI 292
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
GIA TGSGKT F+ P+L+ ++Q+ PGEGP +I+CP+REL +Q H
Sbjct: 293 GIAKTGSGKTAAFIWPMLVHIMDQKE---LEPGEGPIAVIVCPTRELCQQIH 341
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PGEGP +I+CP+REL +Q H
Sbjct: 287 SGRDMIGIAKTGSGKTAAFIWPMLVHIMDQKE---LEPGEGPIAVIVCPTRELCQQIHAE 343
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 344 CKRFGKAY--SLRSVAVYGGGSMWEQAKALQEGAE 376
>gi|303390338|ref|XP_003073400.1| DEAD box RNA helicase-like protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302546|gb|ADM12040.1| DEAD box RNA helicase-like protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 493
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K ++ I + + D R+ + V+G D+P F P +V LE KG
Sbjct: 49 KNFYKEAESISRMSSRDVDSFRKTNEMTVKGMDIPHPISRFEEAGFPSRIVEELEGKGFS 108
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLI 225
PTPIQ QG P ALSGRD++GIA TGSGKTL F+LP L+ +Q+ P G+GP L+
Sbjct: 109 GPTPIQAQGWPMALSGRDMVGIAQTGSGKTLSFILPGLVHAKDQQ---PLRRGDGPIALV 165
Query: 226 ICPSRELARQTHDIIQYYCAALPIGS 251
+ P+REL Q + +C + S
Sbjct: 166 LAPTRELVMQIKKVADEFCGMFGLRS 191
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL F+LP L+ +Q+ P G+GP L++ P+REL Q +
Sbjct: 123 SGRDMVGIAQTGSGKTLSFILPGLVHAKDQQ---PLRRGDGPIALVLAPTRELVMQIKKV 179
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+C LR+ GG + + +G++
Sbjct: 180 ADEFCGMF--GLRSTAVYGGASSQPQIKALHEGVE 212
>gi|147904944|ref|NP_001086205.1| MGC84147 protein [Xenopus laevis]
gi|49522819|gb|AAH74323.1| MGC84147 protein [Xenopus laevis]
Length = 450
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ ++ R L + V G P C SF E L+ + KPTPIQ QGIP A
Sbjct: 227 PQQITEL-RHKLNLRVSGAAAPRLCSSFAHFGFDEQLMHQIRKSEYTKPTPIQCQGIPVA 285
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
LSGRD+IGIA TGSGKT F+ PIL+ ++Q+ PG+GP +I+CP+REL +Q H+
Sbjct: 286 LSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKE---LQPGDGPIAVIVCPTRELCQQIHN 342
Query: 239 IIQYYCAALPIGS 251
+ + A + S
Sbjct: 343 ECKRFGKAYNLRS 355
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKT F+ PIL+ ++Q+ PG+GP +I+CP+REL +Q H+ +
Sbjct: 289 RDMIGIAKTGSGKTAAFIWPILVHIMDQKE---LQPGDGPIAVIVCPTRELCQQIHNECK 345
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A LR+ GG M + +++G +
Sbjct: 346 RFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 376
>gi|147904603|ref|NP_001080569.1| ATP-dependent RNA helicase DDX42 [Xenopus laevis]
gi|82209788|sp|Q7ZY47.1|DDX42_XENLA RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|27696431|gb|AAH43977.1| Ddx42-prov protein [Xenopus laevis]
Length = 947
Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats.
Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ ++ R L + V G P C SF E L+ + +PTPIQ QGIP A
Sbjct: 226 PQQITEL-RHKLNLRVSGAAPPRLCSSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVA 284
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ PIL+ ++Q+ P +GP +I+CP+REL +Q H
Sbjct: 285 LSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKE---LQPADGPIAVIVCPTRELCQQIH 340
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ PIL+ ++Q+ P +GP +I+CP+REL +Q H
Sbjct: 286 SGRDMIGIAKTGSGKTAAFIWPILVHIMDQKE---LQPADGPIAVIVCPTRELCQQIHSE 342
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 343 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 375
>gi|24662330|ref|NP_648413.1| CG6418 [Drosophila melanogaster]
gi|7294797|gb|AAF50131.1| CG6418 [Drosophila melanogaster]
gi|16769458|gb|AAL28948.1| LD32732p [Drosophila melanogaster]
gi|220946788|gb|ACL85937.1| CG6418-PB [synthetic construct]
Length = 791
Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
I +L D+ +RR L + V G P SF E L++A+ +PTPIQ Q
Sbjct: 240 IAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQA 299
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
+P ALSGRDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+
Sbjct: 300 VPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQ---LKPGDGPIGLILAPTRELSL 356
Query: 235 QTHD 238
Q ++
Sbjct: 357 QIYN 360
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+ Q
Sbjct: 302 TALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQ---LKPGDGPIGLILAPTRELSLQI 358
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQS 91
++ + + + + C GG QS
Sbjct: 359 YNEAKKFGKVYNLNVVCCYG-GGSKWEQS 386
>gi|328697410|ref|XP_001948642.2| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Acyrthosiphon pisum]
Length = 718
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 86/146 (58%), Gaps = 6/146 (4%)
Query: 104 PIKTSWRAPR--CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
P K + AP + PD+V ++ R + I + G +VP F PES+V+ L+
Sbjct: 66 PFKKDFYAPHVDTVSRSPDEV-NLYRVDKAITIRGANVPDPSQFFIEGNFPESVVQELKK 124
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
+G +PT IQ QG P ALSGRD++GIA TGSGKTL ++LP + QE P G+GP
Sbjct: 125 QGFSEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLPAAVHISNQE---PLQRGDGP 181
Query: 222 YGLIICPSRELARQTHDIIQYYCAAL 247
L++ P+RELA+Q + + + +++
Sbjct: 182 IALVLAPTRELAQQIQSVAKMFSSSI 207
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++LP + QE P G+GP L++ P+RELA+Q + +
Sbjct: 145 RDLVGIAQTGSGKTLAYMLPAAVHISNQE---PLQRGDGPIALVLAPTRELAQQIQSVAK 201
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +++ TC+ GG P ++ G++
Sbjct: 202 MFSSSI---RNTCI-FGGTPKGPQAHDLQNGVE 230
>gi|413917331|gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 1065
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++L + V G DVP ++ L L+ ++ G +KP PIQ Q +P +SGRD IG
Sbjct: 423 RKHLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQTQALPIIMSGRDCIG 482
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q H I+ +
Sbjct: 483 IAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKV 539
Query: 247 LPI 249
L I
Sbjct: 540 LGI 542
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q H
Sbjct: 476 SGRDCIGIAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIHSD 532
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + L I C+AI GG + Q + +K+G +
Sbjct: 533 IKKFSKVLGI---NCVAIYGGSGVAQQISELKRGAE 565
>gi|242080665|ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
gi|241941451|gb|EES14596.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
Length = 1062
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 55/123 (44%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++L + V G DVP ++ L L+ ++ G +KP PIQ Q +P +SGRD IG
Sbjct: 420 RKHLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQTQALPIIMSGRDCIG 479
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q H I+ +
Sbjct: 480 IAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKV 536
Query: 247 LPI 249
L I
Sbjct: 537 LGI 539
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q H
Sbjct: 473 SGRDCIGIAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIHSD 529
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + L I C+AI GG + Q + +K+G +
Sbjct: 530 IKKFSKVLGI---NCVAIYGGSGVAQQISELKRGAE 562
>gi|403339941|gb|EJY69232.1| hypothetical protein OXYTRI_10149 [Oxytricha trifallax]
Length = 1032
Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats.
Identities = 50/118 (42%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR L++ V+G+ VP F+ + + + ++ ++ +PTPIQ Q +P +LSGRDIIG
Sbjct: 258 RRQLQVRVQGERVPKPITEFKHLLVDQWILDRIKKMNYVEPTPIQAQSLPCSLSGRDIIG 317
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
IA TGSGKTL F++P+L+ L+Q P EGP GL++ P+REL +Q ++ + YC
Sbjct: 318 IAKTGSGKTLAFLIPMLVHILDQR---PLEKNEGPIGLVMAPTRELCQQIYNEYRKYC 372
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 17/123 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKTL F++P+L+ L+Q P EGP GL++ P+REL +Q ++
Sbjct: 311 SGRDIIGIAKTGSGKTLAFLIPMLVHILDQR---PLEKNEGPIGLVMAPTRELCQQIYNE 367
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ YC P + GGV +Q IK G +++ P ++ D+
Sbjct: 368 YRKYCK--PYNVNVLPIFGGVQQHQLWKDIKAGKN------------EIVIATPGRLIDM 413
Query: 126 IRR 128
IR+
Sbjct: 414 IRK 416
>gi|66522071|ref|XP_624210.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Apis mellifera]
Length = 772
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
IQY K + I +L Q D +R+ L I V G P SF ++L++A
Sbjct: 210 IQYESFEKNFYNVHDEIANLNKQQVDDLRKTLGIKVSGPSPPNPVTSFGHFGFDDALIKA 269
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +PAALSGRDIIGIA TGSGKT F+ P+L+ ++Q G
Sbjct: 270 IRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKEG 326
Query: 219 EGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL++Q +
Sbjct: 327 DGPIGLILAPTRELSQQIY 345
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q G+GP GLI+ P+REL++Q +
Sbjct: 291 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKEGDGPIGLILAPTRELSQQIYQE 347
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + + + C GG QS
Sbjct: 348 ARKFGKVYNVQVCCCYG-GGSKWEQS 372
>gi|380022612|ref|XP_003695134.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX42-like [Apis florea]
Length = 772
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
IQY K + I +L Q D +R+ L I V G P SF ++L++A
Sbjct: 210 IQYESFEKNFYNVHDEIANLNKQQVDDLRKTLGIKVSGPSPPNPVTSFGHFGFDDALIKA 269
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +PAALSGRDIIGIA TGSGKT F+ P+L+ ++Q G
Sbjct: 270 IRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKEG 326
Query: 219 EGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL++Q +
Sbjct: 327 DGPIGLILAPTRELSQQIY 345
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 63
+ RDIIGIA TGSGKT F+ P+L+ ++Q G+GP GLI+ P+REL++Q +
Sbjct: 291 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKEGDGPIGLILAPTRELSQQIY 345
>gi|302318882|ref|NP_001032894.2| ATP-dependent RNA helicase DDX42 [Danio rerio]
Length = 908
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+RR L + V G P SF E L+ + +PTPIQ QG+P ALSGRD I
Sbjct: 237 LRRKLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAI 296
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
GIA TGSGKT F+ PIL+ ++Q+ PGEGP +I+CP+REL +Q H
Sbjct: 297 GIAKTGSGKTAAFIWPILVHIMDQKE---LEPGEGPIAVIVCPTRELCQQIH 345
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKT F+ PIL+ ++Q+ PGEGP +I+CP+REL +Q H
Sbjct: 291 SGRDAIGIAKTGSGKTAAFIWPILVHIMDQKE---LEPGEGPIAVIVCPTRELCQQIHAE 347
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 348 CKRFGKAY--GLRSVAVYGGGSMWEQAKALQEGAE 380
>gi|194751055|ref|XP_001957842.1| GF23818 [Drosophila ananassae]
gi|190625124|gb|EDV40648.1| GF23818 [Drosophila ananassae]
Length = 795
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y+ K + I +L ++ +RR L + V G P SF E L++A
Sbjct: 220 IEYDSFEKNFYTEHEDIAALDEEKVRDLRRTLGVKVTGPSPPKPVTSFGHFGFDEPLLKA 279
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +P ALSGRDIIGIA TGSGKT F+ P+LM ++Q+ PG
Sbjct: 280 VRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPLLMHLMDQKE---LQPG 336
Query: 219 EGPYGLIICPSRELARQTHD 238
+GP GLI+ P+REL+ Q ++
Sbjct: 337 DGPIGLILAPTRELSLQIYN 356
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+ Q
Sbjct: 298 TALSGRDIIGIAKTGSGKTAAFIWPLLMHLMDQKE---LQPGDGPIGLILAPTRELSLQI 354
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQS 91
++ + + + + C GG QS
Sbjct: 355 YNEAKKFGKVYNLNVVCCYG-GGSKWEQS 382
>gi|194868558|ref|XP_001972305.1| GG13958 [Drosophila erecta]
gi|190654088|gb|EDV51331.1| GG13958 [Drosophila erecta]
Length = 786
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/119 (45%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
+QV ++ RR L + V G P SF E L++A+ +PTPIQ Q +P AL
Sbjct: 244 EQVREL-RRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTAL 302
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
SGRDIIGIA TGSGKT F+ P+LM ++Q PG+GP GLI+ P+REL+ Q ++
Sbjct: 303 SGRDIIGIAKTGSGKTAAFIWPMLMHVMDQRQ---LKPGDGPIGLILAPTRELSLQIYN 358
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RDIIGIA TGSGKT F+ P+LM ++Q PG+GP GLI+ P+REL+ Q
Sbjct: 300 TALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQRQ---LKPGDGPIGLILAPTRELSLQI 356
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQS 91
++ + + + + C GG QS
Sbjct: 357 YNEAKKFGKVYNLNVVCCYG-GGSKWEQS 384
>gi|84996425|ref|XP_952934.1| DEAD-family helicase [Theileria annulata strain Ankara]
gi|65303931|emb|CAI76310.1| DEAD-family helicase, putative [Theileria annulata]
Length = 757
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/119 (47%), Positives = 73/119 (61%), Gaps = 10/119 (8%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G VPP ++ LP L+ A++ G KPTPIQ+Q IP AL RD+
Sbjct: 320 IFREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDL 379
Query: 185 IGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
IGIA TGSGKT FVLP+L + L+ ET L +GPY LI+ PSRELA Q +D
Sbjct: 380 IGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSL-----DGPYALILAPSRELALQIYD 433
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 69/136 (50%), Gaps = 19/136 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQT 62
RD+IGIA TGSGKT FVLP+L + L+ ET L +GPY LI+ PSRELA Q
Sbjct: 377 RDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSL-----DGPYALILAPSRELALQI 431
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQV 122
+D + A R+ +GG ++KG + I T R C+ D+
Sbjct: 432 YDETVKFSAF--CSCRSVAVVGGRNAESQAFELRKGCEI--IIGTPGRVKDCL----DRA 483
Query: 123 HDIIRR-NLRILVEGD 137
+ ++ + N IL E D
Sbjct: 484 YTVLSQCNYVILDEAD 499
>gi|195493240|ref|XP_002094331.1| GE20258 [Drosophila yakuba]
gi|194180432|gb|EDW94043.1| GE20258 [Drosophila yakuba]
Length = 789
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
+QV ++ RR L + V G P SF E L++A+ +PTPIQ Q +P AL
Sbjct: 246 EQVREL-RRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTAL 304
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
SGRDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+ Q ++
Sbjct: 305 SGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQ---LKPGDGPIGLILAPTRELSLQIYN 360
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+ Q
Sbjct: 302 TALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQ---LKPGDGPIGLILAPTRELSLQI 358
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQS 91
++ + + + + C GG QS
Sbjct: 359 YNEAKKFGKVYNLNVVCCYG-GGSKWEQS 386
>gi|195326619|ref|XP_002030023.1| GM24798 [Drosophila sechellia]
gi|194118966|gb|EDW41009.1| GM24798 [Drosophila sechellia]
Length = 786
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
+QV ++ RR L + V G P SF E L++A+ +PTPIQ Q +P AL
Sbjct: 243 EQVREL-RRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTAL 301
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
SGRDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+ Q ++
Sbjct: 302 SGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQ---LKPGDGPIGLILAPTRELSLQIYN 357
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+ Q
Sbjct: 299 TALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQ---LKPGDGPIGLILAPTRELSLQI 355
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQS 91
++ + + + + C GG QS
Sbjct: 356 YNEAKKFGKVYNLNVVCCYG-GGSKWEQS 383
>gi|321476533|gb|EFX87493.1| hypothetical protein DAPPUDRAFT_306483 [Daphnia pulex]
Length = 805
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/135 (41%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
I +LP + +R L + V G +P CSF E L+ + PTPIQ Q
Sbjct: 271 IKNLPLNQANELRETLGLKVSGISIPKPVCSFAHFNFDEKLMNVIRKSEFTNPTPIQSQA 330
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IPAALSGRD+IGIA TGSGKT F+ P+++ L+Q PG+GP GLI+ P+REL++
Sbjct: 331 IPAALSGRDVIGIAQTGSGKTAAFLWPMIVHILDQPD---LKPGDGPIGLILAPTRELSQ 387
Query: 235 QTHDIIQYYCAALPI 249
Q + + +C I
Sbjct: 388 QIYTEAKKFCKVFGI 402
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+++ L+Q PG+GP GLI+ P+REL++Q +
Sbjct: 336 SGRDVIGIAQTGSGKTAAFLWPMIVHILDQPD---LKPGDGPIGLILAPTRELSQQIYTE 392
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDV 94
+ +C I + C GG QS D+
Sbjct: 393 AKKFCKVFGISVVCCYG-GGSKWEQSKDL 420
>gi|387594137|gb|EIJ89161.1| ATP-dependent RNA helicase DBP2 [Nematocida parisii ERTm3]
gi|387595665|gb|EIJ93288.1| ATP-dependent RNA helicase DBP2 [Nematocida parisii ERTm1]
Length = 511
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 116 LSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGI 175
++L +Q + +R+ + + G+++P C +F P S++ A ++ G PTPIQ QG
Sbjct: 65 VNLTEQEVNDLRKQFDMTITGENIPKPCLNFEYFGFPSSVMAAFKSAGYSAPTPIQAQGW 124
Query: 176 PAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
P ALSGRD++G+A TGSGKTL F+LP L+ Q+ P G+GP L++ P+REL Q
Sbjct: 125 PMALSGRDMVGVANTGSGKTLSFILPALIHAKAQK---PLRSGDGPIVLVLAPTRELVSQ 181
Query: 236 THDIIQYYC 244
+ Y
Sbjct: 182 IEEEASKYA 190
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++G+A TGSGKTL F+LP L+ Q+ P G+GP L++ P+REL Q +
Sbjct: 131 RDMVGVANTGSGKTLSFILPALIHAKAQK---PLRSGDGPIVLVLAPTRELVSQIEEEAS 187
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A LRT GG P I++G +
Sbjct: 188 KY--AKYFGLRTVAVYGGAPAGPQKGAIRRGAE 218
>gi|195552710|ref|XP_002076525.1| GD17585 [Drosophila simulans]
gi|194202136|gb|EDX15712.1| GD17585 [Drosophila simulans]
Length = 786
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
+QV ++ RR L + V G P SF E L++A+ +PTPIQ Q +P AL
Sbjct: 243 EQVREL-RRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTAL 301
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
SGRDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+ Q ++
Sbjct: 302 SGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQ---LKPGDGPIGLILAPTRELSLQIYN 357
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RDIIGIA TGSGKT F+ P+LM ++Q+ PG+GP GLI+ P+REL+ Q
Sbjct: 299 TALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQ---LKPGDGPIGLILAPTRELSLQI 355
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQS 91
++ + + + + C GG QS
Sbjct: 356 YNEAKKFGKVYNLNVVCCYG-GGSKWEQS 383
>gi|195438679|ref|XP_002067260.1| GK16276 [Drosophila willistoni]
gi|194163345|gb|EDW78246.1| GK16276 [Drosophila willistoni]
Length = 950
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R L I V G+D+P +F LP ++ ++ +G KPT IQ QG P ALSGRD++
Sbjct: 223 MRHELEITVSGNDLPHPVANFEEASLPPHIIDEMKRQGFTKPTAIQAQGWPIALSGRDLV 282
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
GIA TGSGKTL ++LP ++ Q P L GEGP L++ P+RELA+Q +++ Y
Sbjct: 283 GIAQTGSGKTLAYMLPAIVHIGNQP---PILRGEGPVALVLAPTRELAQQIQSVVRDY 337
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P L GEGP L++ P+RELA+Q +
Sbjct: 277 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PILRGEGPVALVLAPTRELAQQIQSV 333
Query: 66 IQYYCAALPIPLR-TCLAIGGVPMNQSLDVIKKGIQ 100
++ Y +R TC+ G + Q+ D +++G++
Sbjct: 334 VRDYGHLCQPEIRHTCIFGGSSKVPQARD-LERGVE 368
>gi|356497367|ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1104
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
+ R+ L + + G DVP S+ LP ++ ++ + P PIQ Q +P +SGRD
Sbjct: 465 VYRKQLELKIHGKDVPKPIKSWHQTGLPSKILETIKKMNFEMPMPIQAQALPVIMSGRDC 524
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
IGIA TGSGKTL FVLP+L +Q P + G+GP GLI+ P+REL +Q H I+ +
Sbjct: 525 IGIAKTGSGKTLAFVLPMLRHIKDQP---PVVAGDGPIGLIMAPTRELVQQIHSDIKKFA 581
Query: 245 AAL 247
L
Sbjct: 582 KVL 584
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P + G+GP GLI+ P+REL +Q H
Sbjct: 520 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP---PVVAGDGPIGLIMAPTRELVQQIHSD 576
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + L LR GG + Q + +K+G +
Sbjct: 577 IKKFAKVL--GLRCVPVYGGSGVAQQISELKRGAE 609
>gi|291225668|ref|XP_002732809.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 795
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+RR L + V G D P SF E L+ + PTPIQ QG+P A+SGRDII
Sbjct: 239 LRRKLGVKVSGYDPPKPVSSFGHFGFDEQLMHYIRKSEYSTPTPIQAQGVPIAMSGRDII 298
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
GIA TGSGKT F+ P+L+ ++Q+ PG+GP GLI P+REL++Q H
Sbjct: 299 GIAKTGSGKTAAFIWPLLIHIMDQKD---IKPGDGPIGLICAPTRELSQQIH 347
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 18/123 (14%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q+ PG+GP GLI P+REL++Q H
Sbjct: 293 SGRDIIGIAKTGSGKTAAFIWPLLIHIMDQKD---IKPGDGPIGLICAPTRELSQQIHQE 349
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + A I T A GG M + + G + +++ P ++ D+
Sbjct: 350 CKKFGKAYNI--HTVCAYGGGNMWEQTKACQAGCE-------------ILVATPGRLIDL 394
Query: 126 IRR 128
++R
Sbjct: 395 VKR 397
>gi|195048170|ref|XP_001992482.1| GH24775 [Drosophila grimshawi]
gi|193893323|gb|EDV92189.1| GH24775 [Drosophila grimshawi]
Length = 977
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/128 (41%), Positives = 78/128 (60%), Gaps = 3/128 (2%)
Query: 116 LSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGI 175
L+ +Q +R L I V G+D+P +F LP ++ ++ +G KPT IQ QG
Sbjct: 211 LNRSEQAVAEMRHELEITVSGNDLPHPVANFEESSLPTHVIDEMKRQGFTKPTAIQSQGW 270
Query: 176 PAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
P ALSGRD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q
Sbjct: 271 PIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIMRGEGPIALVLAPTRELAQQ 327
Query: 236 THDIIQYY 243
+++ Y
Sbjct: 328 IQSVVRDY 335
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +
Sbjct: 275 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIMRGEGPIALVLAPTRELAQQIQSV 331
Query: 66 IQYYCAALPIPLR-TCLAIGGVPMNQSLDVIKKGIQ 100
++ Y +R TC+ G + Q D +++G++
Sbjct: 332 VRDYGHLCKPEIRHTCIFGGSSKVPQVRD-LERGVE 366
>gi|403224137|dbj|BAM42267.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
Length = 776
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I ++G VPP ++ LP L+ +++ G KPTPIQ+Q IP
Sbjct: 303 MTDRDWRIFREDFDIYIKGGRVPPPIRTWAESPLPWELLESIKKAGYTKPTPIQMQAIPI 362
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSREL 232
AL RD+IGIA TGSGKT FVLP+L + L+ ET + +GPY L++ PSREL
Sbjct: 363 ALEMRDLIGIAVTGSGKTAAFVLPMLTYVKMLPPLDDETSM-----DGPYALVMAPSREL 417
Query: 233 ARQTHD 238
A Q +D
Sbjct: 418 ALQIYD 423
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 31/136 (22%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQT 62
RD+IGIA TGSGKT FVLP+L + L+ ET + +GPY L++ PSRELA Q
Sbjct: 367 RDLIGIAVTGSGKTAAFVLPMLTYVKMLPPLDDETSM-----DGPYALVMAPSRELALQI 421
Query: 63 HD---IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLP 119
+D YC R+ +GG ++KG + I+ P
Sbjct: 422 YDETNKFSTYCTC-----RSVAVVGGRSAEAQAFELRKGCE-------------IIIGTP 463
Query: 120 DQVHDIIRRNLRILVE 135
++ D + R +L +
Sbjct: 464 GRIKDCLDRAYTVLSQ 479
>gi|395532890|ref|XP_003768499.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Sarcophilus harrisii]
Length = 943
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P QV D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQVIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LDPGDGPIAVIVCPTRELCQQIH 343
Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LDPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|449525702|ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
42-like [Cucumis sativus]
Length = 1098
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP ++ L ++ ++ +KP PIQ Q +P +SGRD IG
Sbjct: 455 RKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIG 514
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL +Q H I+ +
Sbjct: 515 IAKTGSGKTLAFVLPMLRHIKDQS---PVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKV 571
Query: 247 L 247
+
Sbjct: 572 M 572
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL +Q H
Sbjct: 508 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQS---PVVPGDGPIGLIMAPTRELVQQIHSD 564
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + LR GG + Q + +K+G +
Sbjct: 565 IKKFSKVM--GLRCVPVYGGSGVAQQISELKRGAE 597
>gi|449439147|ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Cucumis sativus]
Length = 1118
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP ++ L ++ ++ +KP PIQ Q +P +SGRD IG
Sbjct: 455 RKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIG 514
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL +Q H I+ +
Sbjct: 515 IAKTGSGKTLAFVLPMLRHIKDQS---PVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKV 571
Query: 247 L 247
+
Sbjct: 572 M 572
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL +Q H
Sbjct: 508 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQS---PVVPGDGPIGLIMAPTRELVQQIHSD 564
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + LR GG + Q + +K+G +
Sbjct: 565 IKKFSKVM--GLRCVPVYGGSGVAQQISELKRGAE 597
>gi|260800277|ref|XP_002595060.1| hypothetical protein BRAFLDRAFT_125765 [Branchiostoma floridae]
gi|229280302|gb|EEN51071.1| hypothetical protein BRAFLDRAFT_125765 [Branchiostoma floridae]
Length = 875
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/119 (46%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P +V+++ RR L I + G P SF E L+ + +PTPIQ QGIP A
Sbjct: 212 PAEVNEL-RRKLDIRISGAAPPKLVTSFAHFGFDEQLLHQIRKSEYSQPTPIQAQGIPVA 270
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRDIIGIA TGSGKT FV P+L+ ++Q+ PG+GP GLI P+REL++Q +
Sbjct: 271 LSGRDIIGIAKTGSGKTAAFVWPMLVHIMDQKE---LEPGDGPIGLICAPTRELSQQIY 326
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 63
+ RDIIGIA TGSGKT FV P+L+ ++Q+ PG+GP GLI P+REL++Q +
Sbjct: 272 SGRDIIGIAKTGSGKTAAFVWPMLVHIMDQKE---LEPGDGPIGLICAPTRELSQQIY 326
>gi|195131547|ref|XP_002010212.1| GI14822 [Drosophila mojavensis]
gi|193908662|gb|EDW07529.1| GI14822 [Drosophila mojavensis]
Length = 963
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/118 (42%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R L I V G+++P +F LP ++ ++ +G KPT IQ QG P ALSGRD++
Sbjct: 218 MRHELEITVSGNELPHPVANFEESSLPPHIIDEMKRQGFTKPTAIQAQGWPIALSGRDLV 277
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +++ Y
Sbjct: 278 GIAQTGSGKTLAYMLPAIVHISNQP---PLMRGEGPIALVLAPTRELAQQIQSVVRDY 332
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +
Sbjct: 272 SGRDLVGIAQTGSGKTLAYMLPAIVHISNQP---PLMRGEGPIALVLAPTRELAQQIQSV 328
Query: 66 IQYYCAALPIPLR-TCLAIGGVPMNQSLDVIKKGIQ 100
++ Y +R TC+ G + Q+ D +++G++
Sbjct: 329 VRDYGHLCKPEIRHTCIFGGSSKVPQARD-LERGVE 363
>gi|429961399|gb|ELA40944.1| hypothetical protein VICG_02033 [Vittaforma corneae ATCC 50505]
Length = 508
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 3/119 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R + R+ + G+D+P SF + PE ++R EAKG PTPIQ QG P ALSGRD++
Sbjct: 70 LRESNRMRLVGNDIPLPIRSFSSVSFPEEVLRHFEAKGYANPTPIQAQGWPMALSGRDMV 129
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKT+ FVLP L+ +++ P +GP LI+ P+REL Q +++ Y
Sbjct: 130 GIADTGSGKTISFVLPALIHA---QSQPPLREDDGPIVLILAPTRELCTQIETVVREYT 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKT+ FVLP L+ +++ P +GP LI+ P+REL Q +++
Sbjct: 126 RDMVGIADTGSGKTISFVLPALIHA---QSQPPLREDDGPIVLILAPTRELCTQIETVVR 182
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y LR+C GG + +K+GI+
Sbjct: 183 EYTPYY--NLRSCAVYGGASIVPQKRALKRGIE 213
>gi|449439149|ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
[Cucumis sativus]
Length = 1040
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP ++ L ++ ++ +KP PIQ Q +P +SGRD IG
Sbjct: 377 RKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSGRDCIG 436
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL +Q H I+ +
Sbjct: 437 IAKTGSGKTLAFVLPMLRHIKDQS---PVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKV 493
Query: 247 L 247
+
Sbjct: 494 M 494
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL +Q H
Sbjct: 430 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQS---PVVPGDGPIGLIMAPTRELVQQIHSD 486
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + LR GG + Q + +K+G +
Sbjct: 487 IKKFSKVM--GLRCVPVYGGSGVAQQISELKRGAE 519
>gi|393215693|gb|EJD01184.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 868
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/140 (40%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I Y K +RAP I + D+ D++R L I + G D P + LP S +
Sbjct: 155 IVYEPFRKEFYRAPPEIAEMTDEEADLLRLELDGIKIRGIDCPRPITKWSHCGLPASCLD 214
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ G PTPIQ Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +Q P P
Sbjct: 215 VIKKLGFTGPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQR---PLEP 271
Query: 218 GEGPYGLIICPSRELARQTH 237
EGP +++ P+RELA Q H
Sbjct: 272 MEGPMAIVMTPTRELATQIH 291
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P P EGP +++ P+RELA Q H
Sbjct: 237 SGRDVIGVAKTGSGKTIAFLLPLFRHIKDQR---PLEPMEGPMAIVMTPTRELATQIHRE 293
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 294 CKPFLKVL--NLRAVCAYGGSPIKDQIAEMKKGAE 326
>gi|300120970|emb|CBK21212.2| unnamed protein product [Blastocystis hominis]
Length = 617
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
I +PD + R + +I+ +G+++P SF + P ++ + G K PTPIQ Q
Sbjct: 162 AITKMPDSEVEQWRHDNQIICQGENIPKPVLSFDVSPFPADVLDVIHRAGFKAPTPIQSQ 221
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P ALSGRD++GIA TGSGKTL F+LP ++ Q P L PG+GP L++ P+REL
Sbjct: 222 GWPMALSGRDVVGIAATGSGKTLAFILPAIIHIRAQ----PMLRPGDGPICLVLSPTREL 277
Query: 233 ARQTHDIIQYYCAALPIGS 251
A QT Q CA S
Sbjct: 278 ANQT----QEECARFGTSS 292
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL F+LP ++ Q P L PG+GP L++ P+RELA QT
Sbjct: 228 SGRDVVGIAATGSGKTLAFILPAIIHIRAQ----PMLRPGDGPICLVLSPTRELANQT-- 281
Query: 65 IIQYYCAALPIP--LRTCLAIGGVPMNQSLDVIKKGIQ 100
Q CA +R GGVP Q +++G +
Sbjct: 282 --QEECARFGTSSGIRNTCVYGGVPRRQQAYDLRRGAE 317
>gi|242019547|ref|XP_002430222.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212515318|gb|EEB17484.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 763
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y D K + + +L + +R+ L I V G P F E+L++
Sbjct: 224 IEYQDFEKNFYVVHDDVANLSKSKVEELRKTLGIKVTGPQPPHPVVGFAYFGFDEALMKV 283
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ PTPIQ Q +PAALSGRDIIGIA TGSGKT FV P+L+ ++Q+ PG
Sbjct: 284 IRKSEYTTPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFVWPMLIHIMDQKE---LKPG 340
Query: 219 EGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL++Q +
Sbjct: 341 DGPIGLILAPTRELSQQIY 359
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT FV P+L+ ++Q+ PG+GP GLI+ P+REL++Q +
Sbjct: 305 SGRDIIGIAKTGSGKTAAFVWPMLIHIMDQKE---LKPGDGPIGLILAPTRELSQQIYSE 361
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 362 AKKFGKVYNIQVICCYG-GGSKWEQS 386
>gi|356538821|ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1107
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
+ R+ L + + G DVP S+ L ++ ++ +KP PIQ Q +P +SGRD
Sbjct: 468 VYRKQLELKIHGKDVPKPIKSWHQTGLASKILETIKKMNFEKPMPIQAQALPVIMSGRDC 527
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
IGIA TGSGKTL FVLP+L +Q P + G+GP GLI+ P+REL +Q H I+ +
Sbjct: 528 IGIAKTGSGKTLAFVLPMLRHIKDQP---PVVAGDGPIGLIMAPTRELVQQIHSDIKKFA 584
Query: 245 AAL 247
L
Sbjct: 585 KVL 587
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P + G+GP GLI+ P+REL +Q H
Sbjct: 523 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP---PVVAGDGPIGLIMAPTRELVQQIHSD 579
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + L LR GG + Q + +K+G +
Sbjct: 580 IKKFAKVL--GLRCVPVYGGSGVAQQISELKRGAE 612
>gi|405969088|gb|EKC34097.1| ATP-dependent RNA helicase DDX42 [Crassostrea gigas]
Length = 788
Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats.
Identities = 55/119 (46%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P++V D +R+ L I V G + P SF E+L+ A+ +PTPIQ QGIP A
Sbjct: 273 PNEV-DELRKKLGIRVSGFNPPKPVSSFAHFGFDENLMSAIRKSEFSQPTPIQAQGIPLA 331
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
L+GRDIIGIA TGSGKT F+ P+L+ ++Q GEGP GLI+ P+REL++Q +
Sbjct: 332 LNGRDIIGIAKTGSGKTAAFLWPLLVHIMDQRE---LEEGEGPVGLILAPTRELSQQIY 387
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 63
N RDIIGIA TGSGKT F+ P+L+ ++Q GEGP GLI+ P+REL++Q +
Sbjct: 333 NGRDIIGIAKTGSGKTAAFLWPLLVHIMDQRE---LEEGEGPVGLILAPTRELSQQIY 387
>gi|322799398|gb|EFZ20748.1| hypothetical protein SINV_08125 [Solenopsis invicta]
Length = 764
Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K + I SL Q D +++ L I V G P SF ++L++
Sbjct: 209 IEYEPFEKNFYNVHEEIASLSKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIKT 268
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +PAALSGRDIIGIA TGSGKT F+ P+L+ ++Q G
Sbjct: 269 IRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAG 325
Query: 219 EGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL++Q +
Sbjct: 326 DGPIGLILAPTRELSQQIY 344
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q G+GP GLI+ P+REL++Q +
Sbjct: 290 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAGDGPIGLILAPTRELSQQIYQE 346
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 347 AKKFGKVYNIQVCCCYG-GGSKWEQS 371
>gi|294875381|ref|XP_002767294.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
gi|239868857|gb|EER00012.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
Length = 1227
Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPD-QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
I+Y K ++ R I ++P+ +V + + N I V G P SF + L ++R
Sbjct: 450 IEYYPIKKNLYKQVREISNMPEHEVAQLRQSNGDIRVRGKHCPRPIKSFAMAGLDVRILR 509
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
L+ KGI P PIQ+Q IPA L GRD+I IA TGSGKTL ++LP++ + Q P
Sbjct: 510 MLDRKGITTPFPIQMQAIPALLCGRDVIAIAPTGSGKTLAYLLPMVRHVMAQP---PLFF 566
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGP GL+I P+RELA Q ++ + C A+
Sbjct: 567 NEGPIGLVIAPTRELALQINEQAEALCHAV 596
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+I IA TGSGKTL ++LP++ + Q P EGP GL+I P+RELA Q ++ +
Sbjct: 534 RDVIAIAPTGSGKTLAYLLPMVRHVMAQP---PLFFNEGPIGLVIAPTRELALQINEQAE 590
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
C A + L+ A GG M L +K G
Sbjct: 591 ALCHA--VNLKCACAYGGGIMGPQLSKLKAG 619
>gi|350426308|ref|XP_003494399.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus impatiens]
Length = 774
Score = 103 bits (258), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K + I +L Q D +++ L I V G P SF ++L++A
Sbjct: 210 IKYESFEKNFYNVHDEIANLSKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIKA 269
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +PAALSGRDIIGIA TGSGKT F+ P+L+ ++Q G
Sbjct: 270 IRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAG 326
Query: 219 EGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL++Q +
Sbjct: 327 DGPIGLILAPTRELSQQIY 345
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q G+GP GLI+ P+REL++Q +
Sbjct: 291 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAGDGPIGLILAPTRELSQQIYQE 347
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 348 ARKFGKVYNIQVCCCYG-GGSKWEQS 372
>gi|71029108|ref|XP_764197.1| RNA helicase [Theileria parva strain Muguga]
gi|68351151|gb|EAN31914.1| RNA helicase, putative [Theileria parva]
Length = 635
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 74/122 (60%), Gaps = 4/122 (3%)
Query: 115 ILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ Q D IRR I +V G DVP F P ++ ++EA G K+PTPIQVQ
Sbjct: 180 VKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPRYILSSIEAAGFKEPTPIQVQ 239
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
P ALSGRD+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+RELA
Sbjct: 240 SWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQAL---LRPGDGPIVLVLAPTRELA 296
Query: 234 RQ 235
Q
Sbjct: 297 EQ 298
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+RELA Q +
Sbjct: 248 RDMIGIAETGSGKTLAFLLPAIVHINAQAL---LRPGDGPIVLVLAPTRELAEQIKETAL 304
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L+T +A GGVP +++G++
Sbjct: 305 VFGRS--SKLKTSVAYGGVPKRFQTIALRRGVE 335
>gi|444726996|gb|ELW67506.1| ATP-dependent RNA helicase DDX42 [Tupaia chinensis]
Length = 939
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 125 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 183
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 184 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 239
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 185 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 241
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 242 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 274
>gi|431908881|gb|ELK12473.1| ATP-dependent RNA helicase DDX42 [Pteropus alecto]
Length = 927
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 220 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 278
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 279 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 334
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 280 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 336
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 337 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 369
>gi|426347141|ref|XP_004041217.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Gorilla
gorilla gorilla]
gi|426347143|ref|XP_004041218.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Gorilla
gorilla gorilla]
Length = 938
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|426238255|ref|XP_004013070.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Ovis aries]
Length = 948
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|157817897|ref|NP_001100529.1| ATP-dependent RNA helicase DDX42 [Rattus norvegicus]
gi|149054552|gb|EDM06369.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (predicted) [Rattus
norvegicus]
Length = 929
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|74152734|dbj|BAE42635.1| unnamed protein product [Mus musculus]
Length = 929
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|75061727|sp|Q5R7D1.1|DDX42_PONAB RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|55731230|emb|CAH92329.1| hypothetical protein [Pongo abelii]
Length = 942
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 GKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|26340024|dbj|BAC33675.1| unnamed protein product [Mus musculus]
Length = 810
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 110 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 168
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 169 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 224
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 170 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 226
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 227 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 259
>gi|417405318|gb|JAA49373.1| Putative rna helicase [Desmodus rotundus]
Length = 933
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|410981498|ref|XP_003997105.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Felis catus]
Length = 934
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|403303756|ref|XP_003942489.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403303758|ref|XP_003942490.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 933
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|402900734|ref|XP_003913323.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Papio
anubis]
gi|402900736|ref|XP_003913324.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Papio
anubis]
Length = 937
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|395826079|ref|XP_003786247.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Otolemur garnettii]
Length = 936
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|401827392|ref|XP_003887788.1| ATP-dependent RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998795|gb|AFM98807.1| ATP-dependent RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 493
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ ++V+G DVP F P +V L AKG + PTPIQ QG P ALSGRD++
Sbjct: 69 FRKANEMVVKGTDVPHPIQKFEDAGFPSRVVEDLAAKGFEGPTPIQAQGWPMALSGRDMV 128
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
GIA TGSGKTL F+LP L+ +Q+ P G+GP L++ P+REL Q + +C
Sbjct: 129 GIAQTGSGKTLSFILPALVHAKDQQ---PLRRGDGPIVLVLAPTRELVMQIKKVADEFCG 185
Query: 246 ALPIGS 251
+ S
Sbjct: 186 MFNLRS 191
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL F+LP L+ +Q+ P G+GP L++ P+REL Q +
Sbjct: 123 SGRDMVGIAQTGSGKTLSFILPALVHAKDQQ---PLRRGDGPIVLVLAPTRELVMQIKKV 179
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
+C LR+ GG + + +G + I T P ++ L DQ H
Sbjct: 180 ADEFCGMF--NLRSTAVYGGASSQPQIRALHEGAEV--VIAT----PGRLIDLHDQGH 229
>gi|358417495|ref|XP_003583658.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
gi|359077050|ref|XP_003587506.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
Length = 947
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|351704433|gb|EHB07352.1| ATP-dependent RNA helicase DDX42 [Heterocephalus glaber]
Length = 935
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 230 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 288
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 344
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 290 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 346
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 347 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 379
>gi|345804940|ref|XP_537598.3| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
isoform 1 [Canis lupus familiaris]
Length = 934
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|344285247|ref|XP_003414374.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Loxodonta africana]
Length = 934
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|354479437|ref|XP_003501916.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
gi|344243071|gb|EGV99174.1| ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
Length = 928
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 228 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 286
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 287 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 342
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 344
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 345 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 377
>gi|332243110|ref|XP_003270725.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Nomascus leucogenys]
Length = 938
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|301778305|ref|XP_002924562.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Ailuropoda
melanoleuca]
Length = 935
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|296201782|ref|XP_002748184.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Callithrix jacchus]
Length = 934
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|291406357|ref|XP_002719521.1| PREDICTED: DEAD box polypeptide 42 protein [Oryctolagus cuniculus]
Length = 935
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|281351661|gb|EFB27245.1| hypothetical protein PANDA_013938 [Ailuropoda melanoleuca]
Length = 940
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 234 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 292
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 293 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 348
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 294 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 350
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 351 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 383
>gi|206725493|ref|NP_001126368.1| ATP-dependent RNA helicase DDX42 [Pongo abelii]
Length = 942
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 GKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|194216767|ref|XP_001501051.2| PREDICTED: ATP-dependent RNA helicase DDX42 [Equus caballus]
Length = 935
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|148702332|gb|EDL34279.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Mus
musculus]
Length = 927
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 227 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 285
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 286 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 341
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 287 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 343
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 344 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 376
>gi|148702333|gb|EDL34280.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Mus
musculus]
Length = 1012
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 312 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 370
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 371 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 426
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 372 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 428
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 429 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 461
>gi|133777033|gb|AAH43036.4| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Mus musculus]
Length = 810
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 110 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 168
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 169 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 224
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 170 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 226
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 227 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 259
>gi|119614682|gb|EAW94276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Homo
sapiens]
Length = 828
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 119 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 177
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 178 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 233
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 179 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 235
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 236 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 268
>gi|119614684|gb|EAW94278.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_c [Homo
sapiens]
Length = 936
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 227 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 285
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 286 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 341
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 287 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 343
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 344 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 376
>gi|114669830|ref|XP_001147818.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 7 [Pan
troglodytes]
gi|114669832|ref|XP_001147880.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 8 [Pan
troglodytes]
gi|397480220|ref|XP_003811385.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Pan
paniscus]
gi|397480222|ref|XP_003811386.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Pan
paniscus]
gi|410223570|gb|JAA09004.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410223572|gb|JAA09005.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410254498|gb|JAA15216.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294570|gb|JAA25885.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294572|gb|JAA25886.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338913|gb|JAA38403.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338915|gb|JAA38404.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
Length = 938
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|387763217|ref|NP_001248484.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|355568823|gb|EHH25104.1| hypothetical protein EGK_08866 [Macaca mulatta]
gi|355754284|gb|EHH58249.1| hypothetical protein EGM_08053 [Macaca fascicularis]
gi|380809324|gb|AFE76537.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|383415577|gb|AFH31002.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|384945118|gb|AFI36164.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
Length = 937
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|51258614|gb|AAH78667.1| DDX42 protein, partial [Homo sapiens]
Length = 919
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 210 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 268
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 269 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 324
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 270 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 326
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 327 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 359
>gi|15930131|gb|AAH15505.1| DDX42 protein [Homo sapiens]
gi|23336904|tpg|DAA00077.1| TPA_exp: SF3b125 DEAD-box protein [Homo sapiens]
gi|158259277|dbj|BAF85597.1| unnamed protein product [Homo sapiens]
Length = 819
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 110 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 168
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 169 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 224
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 170 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 226
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 227 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 259
>gi|157838001|ref|NP_082350.3| ATP-dependent RNA helicase DDX42 [Mus musculus]
gi|123796460|sp|Q810A7.3|DDX42_MOUSE RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|74146847|dbj|BAE41388.1| unnamed protein product [Mus musculus]
Length = 929
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|45446743|ref|NP_031398.2| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|45446747|ref|NP_987095.1| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|74750541|sp|Q86XP3.1|DDX42_HUMAN RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42; AltName: Full=RNA helicase-like protein;
Short=RHELP; AltName: Full=RNA helicase-related protein;
Short=RNAHP; AltName: Full=SF3b DEAD box protein;
AltName: Full=Splicing factor 3B-associated 125 kDa
protein; Short=SF3b125
gi|29420431|dbj|BAC66466.1| RNA helicase-related protein [Homo sapiens]
gi|62205357|gb|AAH93081.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Homo sapiens]
gi|119614683|gb|EAW94277.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Homo
sapiens]
gi|168277556|dbj|BAG10756.1| ATP-dependent RNA helicase DDX42 [synthetic construct]
Length = 938
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|307190551|gb|EFN74538.1| ATP-dependent RNA helicase DDX42 [Camponotus floridanus]
Length = 769
Score = 103 bits (257), Expect = 6e-20, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 87 PMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSF 146
PM+ S I+Y K + I SL Q D +++ L I V G P SF
Sbjct: 203 PMDHS------EIEYETFDKNFYNVHEEIASLSKQQIDDLKKTLGIKVSGPSPPNPVTSF 256
Query: 147 RLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFC 206
++L++ + +PTPIQ Q +PAALSGRDIIGIA TGSGKT F+ P+L+
Sbjct: 257 GHFGFDDALMKTIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHI 316
Query: 207 LEQETKLPFLPGEGPYGLIICPSRELARQTH 237
++Q G+GP GLI+ P+REL++Q +
Sbjct: 317 MDQRE---LKAGDGPIGLILAPTRELSQQIY 344
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q G+GP GLI+ P+REL++Q +
Sbjct: 290 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAGDGPIGLILAPTRELSQQIYQE 346
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 347 AKKFGKVYNIQVCCCYG-GGSKWEQS 371
>gi|125979227|ref|XP_001353646.1| GA19578 [Drosophila pseudoobscura pseudoobscura]
gi|54642411|gb|EAL31160.1| GA19578 [Drosophila pseudoobscura pseudoobscura]
Length = 812
Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats.
Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K + A I SL ++ +R L + V G P SF E L++A
Sbjct: 230 IEYEPFEKNFYTAHEEIASLDEEGVRELRHTLGVKVTGPSPPNPVTSFGHFGFDEQLIKA 289
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +P AL+GRDIIGIA TGSGKT F+ P+LM ++Q PG
Sbjct: 290 VRKAEYTQPTPIQAQAVPTALAGRDIIGIAKTGSGKTAAFIWPLLMHLMDQRE---LKPG 346
Query: 219 EGPYGLIICPSRELARQTHD 238
+GP GLI+ P+REL+ Q ++
Sbjct: 347 DGPIGLILAPTRELSLQIYN 366
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIA TGSGKT F+ P+LM ++Q PG+GP GLI+ P+REL+ Q ++ +
Sbjct: 313 RDIIGIAKTGSGKTAAFIWPLLMHLMDQRE---LKPGDGPIGLILAPTRELSLQIYNEAK 369
Query: 68 YYCAALPIPLRTCLAIGGVPMNQS 91
+ I + C GG QS
Sbjct: 370 KFGKVYNINVVCCYG-GGSKWEQS 392
>gi|195394063|ref|XP_002055665.1| GJ19487 [Drosophila virilis]
gi|194150175|gb|EDW65866.1| GJ19487 [Drosophila virilis]
Length = 953
Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/118 (42%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R L I V G+++P +F LP ++ ++ +G KPT IQ QG P ALSGRD++
Sbjct: 219 MRHELEITVSGNELPHPVANFEESSLPPHIIDEMKRQGFTKPTAIQAQGWPIALSGRDLV 278
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +++ Y
Sbjct: 279 GIAQTGSGKTLAYMLPAIVHIGNQP---PIMRGEGPIALVLAPTRELAQQIQSVVRDY 333
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q P + GEGP L++ P+RELA+Q +
Sbjct: 273 SGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIMRGEGPIALVLAPTRELAQQIQSV 329
Query: 66 IQYYCAALPIPLR-TCLAIGGVPMNQSLDVIKKGIQ 100
++ Y +R TC+ G + Q+ D +++G++
Sbjct: 330 VRDYGHLCKPEIRHTCIFGGSSKVPQARD-LERGVE 364
>gi|195171504|ref|XP_002026545.1| GL21821 [Drosophila persimilis]
gi|194111461|gb|EDW33504.1| GL21821 [Drosophila persimilis]
Length = 812
Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats.
Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K + A I SL ++ +R L + V G P SF E L++A
Sbjct: 230 IEYEPFEKNFYTAHEEIASLDEEGVRELRHTLGVKVTGPSPPNPVTSFGHFGFDEQLIKA 289
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +P AL+GRDIIGIA TGSGKT F+ P+LM ++Q PG
Sbjct: 290 VRKAEYTQPTPIQAQAVPTALAGRDIIGIAKTGSGKTAAFIWPLLMHLMDQRE---LKPG 346
Query: 219 EGPYGLIICPSRELARQTHD 238
+GP GLI+ P+REL+ Q ++
Sbjct: 347 DGPIGLILAPTRELSLQIYN 366
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIA TGSGKT F+ P+LM ++Q PG+GP GLI+ P+REL+ Q ++ +
Sbjct: 313 RDIIGIAKTGSGKTAAFIWPLLMHLMDQRE---LKPGDGPIGLILAPTRELSLQIYNEAK 369
Query: 68 YYCAALPIPLRTCLAIGGVPMNQS 91
+ I + C GG QS
Sbjct: 370 KFGKVYNINVVCCYG-GGSKWEQS 392
>gi|378755949|gb|EHY65974.1| ATP-dependent RNA helicase DBP2 [Nematocida sp. 1 ERTm2]
Length = 517
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ +Q + +R I + GD VP C F P S++ A ++ G +PTPIQ QG P
Sbjct: 67 MTNQEVEELRNKFDITITGDGVPKPCTKFEYFGFPASVMAAFKSAGYSEPTPIQAQGWPL 126
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
ALSGRD++G+A TGSGKTL F+LP L+ Q+ P G+GP L++ P+REL Q
Sbjct: 127 ALSGRDMVGVANTGSGKTLSFILPALIHAKAQK---PLRQGDGPIVLVLAPTRELVSQIE 183
Query: 238 D 238
+
Sbjct: 184 E 184
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++G+A TGSGKTL F+LP L+ Q+ P G+GP L++ P+REL Q +
Sbjct: 131 RDMVGVANTGSGKTLSFILPALIHAKAQK---PLRQGDGPIVLVLAPTRELVSQIEEEAC 187
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A LRT GG P I++G +
Sbjct: 188 KY--AKYFGLRTVAVFGGAPAGPQKGAIRRGAE 218
>gi|340723638|ref|XP_003400196.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus
terrestris]
Length = 774
Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K + I +L Q D +++ L I V G P SF ++L++A
Sbjct: 210 IKYESFEKNFYNVHDEIANLNKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIKA 269
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +PAALSGRDIIGIA TGSGKT F+ P+L+ ++Q G
Sbjct: 270 IRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAG 326
Query: 219 EGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL++Q +
Sbjct: 327 DGPIGLILAPTRELSQQIY 345
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q G+GP GLI+ P+REL++Q +
Sbjct: 291 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAGDGPIGLILAPTRELSQQIYQE 347
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 348 ARKFGKVYNIQVCCCYG-GGSKWEQS 372
>gi|312375424|gb|EFR22803.1| hypothetical protein AND_14200 [Anopheles darlingi]
Length = 971
Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats.
Identities = 52/142 (36%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
Query: 103 DPIKTSWRAPR-CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
+P + + P +++ D+ + R + ++ V G++VP C SF PE ++ ++
Sbjct: 225 EPFQKDFYVPHPNVMARSDEEVQVFRESTQVTVMGNNVPHPCQSFEEGNFPEYVMNEIKK 284
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
+G +PT IQ QG P ALSGRD++GIA TGSGKTL ++LP L+ Q+ P G+GP
Sbjct: 285 QGFPRPTAIQSQGWPIALSGRDMVGIAQTGSGKTLAYMLPGLVHISHQK---PLTRGDGP 341
Query: 222 YGLIICPSRELARQTHDIIQYY 243
L++ P+RELA+Q +++ +
Sbjct: 342 IVLVLAPTRELAQQIQTVVREF 363
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP L+ Q+ P G+GP L++ P+RELA+Q +
Sbjct: 303 SGRDMVGIAQTGSGKTLAYMLPGLVHISHQK---PLTRGDGPIVLVLAPTRELAQQIQTV 359
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + +R GG + +++G++
Sbjct: 360 VREFGNHSKPNIRYTCIFGGALKGPQVRDLERGVE 394
>gi|224086197|ref|XP_002193200.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Taeniopygia guttata]
Length = 923
Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P QV ++ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQVVEL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHSE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|327275873|ref|XP_003222696.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Anolis
carolinensis]
Length = 924
Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P QV ++ R L + V G P SF E L+ + +PTPIQ QGIP A
Sbjct: 229 PQQVVEL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGIPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
+SGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 MSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|307204462|gb|EFN83169.1| ATP-dependent RNA helicase DDX42 [Harpegnathos saltator]
Length = 770
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I Y K + I +L Q D +R+ L I V G P SF ++L++A
Sbjct: 209 IDYESFEKNFYNVHEEIANLNKQQVDNLRKTLGIKVSGPSPPNPVTSFGHFGFDDALMKA 268
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PTPIQ Q +PAAL+GRDIIGIA TGSGKT F+ P+L+ ++Q G
Sbjct: 269 IRKNEFTQPTPIQAQAVPAALNGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAG 325
Query: 219 EGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL++Q +
Sbjct: 326 DGPIGLILAPTRELSQQIY 344
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
N RDIIGIA TGSGKT F+ P+L+ ++Q G+GP GLI+ P+REL++Q +
Sbjct: 290 NGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRE---LKAGDGPIGLILAPTRELSQQIYQE 346
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 347 AKKFGKVYNIQVCCCYG-GGSKWEQS 371
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP ++ L ++ ++ ++P PIQ Q +P +SGRD IG
Sbjct: 482 RKQLELKIHGKDVPKPVKTWHQTGLTTKILDTIKKLNYERPMPIQAQALPIIMSGRDCIG 541
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL +Q H I+ +
Sbjct: 542 IAKTGSGKTLAFVLPMLRHIKDQP---PVMPGDGPIGLIMAPTRELVQQIHSDIKKFAKV 598
Query: 247 LPI 249
+ I
Sbjct: 599 VGI 601
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL +Q H
Sbjct: 535 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP---PVMPGDGPIGLIMAPTRELVQQIHSD 591
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + + I +C+ + GG + Q + +K+G +
Sbjct: 592 IKKFAKVVGI---SCVPVYGGSGVAQQISELKRGAE 624
>gi|71896321|ref|NP_001026097.1| ATP-dependent RNA helicase DDX42 [Gallus gallus]
gi|82194905|sp|Q5F485.1|DDX42_CHICK RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|60098437|emb|CAH65049.1| hypothetical protein RCJMB04_2e15 [Gallus gallus]
Length = 944
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P QV ++ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQVVEL-RHKLNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
+SGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 MSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHSE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|195998213|ref|XP_002108975.1| hypothetical protein TRIADDRAFT_63563 [Trichoplax adhaerens]
gi|190589751|gb|EDV29773.1| hypothetical protein TRIADDRAFT_63563 [Trichoplax adhaerens]
Length = 654
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R + +I+V G ++P SF P+ ++ + +G K PTPIQ Q P LSGRD++G
Sbjct: 62 RDDNKIIVFGRNIPKPVLSFSEASFPDYVMSEINNQGFKLPTPIQAQSWPVGLSGRDVVG 121
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
IA TGSGKTL +VLP ++ Q P G+GP LI+CP+RELA+Q H +
Sbjct: 122 IAQTGSGKTLAYVLPSIIHIKNQP---PLRHGDGPIALILCPTRELAQQVHSV 171
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL +VLP ++ Q P G+GP LI+CP+RELA+Q H +
Sbjct: 117 RDVVGIAQTGSGKTLAYVLPSIIHIKNQP---PLRHGDGPIALILCPTRELAQQVHSVST 173
Query: 68 YYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
+ I C I GG P L + +G++
Sbjct: 174 TFGRLARI---NCACIYGGSPKGPQLRELSRGVE 204
>gi|156084736|ref|XP_001609851.1| DEAD box RNA helicase [Babesia bovis T2Bo]
gi|154797103|gb|EDO06283.1| DEAD box RNA helicase, putative [Babesia bovis]
Length = 714
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 11/141 (7%)
Query: 102 NDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
+D + T W A + ++ + I R + I V+G VPP ++ LP L+RA++
Sbjct: 256 DDDVDTHWSA-KTKENMTQRDWRIFREDFDIYVKGTRVPPPMRTWAESNLPSELLRAIKD 314
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFL 216
G K PTPIQ+Q IP L RD+IG+A TGSGKT+ FVLP+L + L ++T
Sbjct: 315 AGFKSPTPIQMQAIPIGLGMRDLIGLAETGSGKTVAFVLPMLTYVKALPPLNEDT----- 369
Query: 217 PGEGPYGLIICPSRELARQTH 237
+GPY L + P+RELA Q H
Sbjct: 370 LQDGPYALTLAPTRELATQIH 390
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 31/136 (22%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQT 62
RD+IG+A TGSGKT+ FVLP+L + L ++T +GPY L + P+RELA Q
Sbjct: 335 RDLIGLAETGSGKTVAFVLPMLTYVKALPPLNEDT-----LQDGPYALTLAPTRELATQI 389
Query: 63 H-DIIQY--YCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLP 119
H + +++ +C+ RT L +GG ++Q ++ G + ++ P
Sbjct: 390 HAETVKFSAFCSC-----RTVLVVGGHSVDQQGFELRNGAE-------------IVIGTP 431
Query: 120 DQVHDIIRRNLRILVE 135
++ D + R+ +L +
Sbjct: 432 GRIKDCLDRSYTVLTQ 447
>gi|357126556|ref|XP_003564953.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like
[Brachypodium distachyon]
Length = 496
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 79/133 (59%), Gaps = 6/133 (4%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
D+V + RR I V+G DVP C FR + PE +++ + G +PTPIQ QG P AL
Sbjct: 70 DEV-EAYRRRREITVDGHDVPKPVCDFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMAL 128
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 238
GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 129 KGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQIQQ 184
Query: 239 IIQYYCAALPIGS 251
+ A+ I S
Sbjct: 185 ETTKFGASSKIKS 197
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 131 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQIQQET 186
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 187 TKFGASSKIK-STCI-YGGVPKGPQVRDLQKGVE 218
>gi|294658221|ref|XP_002770738.1| DEHA2F04466p [Debaryomyces hansenii CBS767]
gi|218511822|sp|Q6BML1.2|PRP5_DEBHA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|202952969|emb|CAR66268.1| DEHA2F04466p [Debaryomyces hansenii CBS767]
Length = 913
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 64/165 (38%), Positives = 91/165 (55%), Gaps = 13/165 (7%)
Query: 93 DVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMK-- 150
DV IQY+ K + P I LP++ NLR+ ++G V C+ +++
Sbjct: 264 DVDHNQIQYHPFRKDFYTEPTEISKLPEEE----VANLRLKLDGIKVRGVNCTRPIIRWS 319
Query: 151 ---LPESLVRALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFC 206
LP +++ +E + P+ IQ Q IPA +SGRDIIG+A TGSGKTL FVLP+L
Sbjct: 320 QLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHI 379
Query: 207 LEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
+Q P G+GP GLI+ P+RELA Q H + ++ L I S
Sbjct: 380 QDQP---PLKKGDGPIGLIMTPTRELALQIHKELNHFTKKLNISS 421
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIG+A TGSGKTL FVLP+L +Q P G+GP GLI+ P+RELA Q H
Sbjct: 353 SGRDIIGVAKTGSGKTLSFVLPLLRHIQDQP---PLKKGDGPIGLIMTPTRELALQIHKE 409
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ L I +C GG + + +KKG Q
Sbjct: 410 LNHFTKKLNI--SSCCCFGGSSIESQIAELKKGAQ 442
>gi|326934003|ref|XP_003213086.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Meleagris
gallopavo]
Length = 944
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P QV ++ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 229 PQQVVEL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 287
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
+SGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 288 MSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 343
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 289 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHSE 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 346 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|157117281|ref|XP_001653010.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108883352|gb|EAT47577.1| AAEL001317-PA [Aedes aegypti]
Length = 799
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R L + V G P SF E L++A+ +PTPIQ QG+PAALSGRDII
Sbjct: 261 LRNKLGVKVSGPAPPAPVTSFAHFGFDEQLMKAIRKSEYTQPTPIQAQGVPAALSGRDII 320
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
GIA TGSGKT F+ P+L+ ++Q+ PG+GP GLI+ P+REL+ Q +
Sbjct: 321 GIAKTGSGKTAAFLWPMLVHIMDQKE---LGPGDGPIGLILAPTRELSLQIY 369
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L+ ++Q+ PG+GP GLI+ P+REL+ Q +
Sbjct: 315 SGRDIIGIAKTGSGKTAAFLWPMLVHIMDQKE---LGPGDGPIGLILAPTRELSLQIYQE 371
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 372 AKKFGKIYNISVCCCYG-GGSKWEQS 396
>gi|328868659|gb|EGG17037.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 834
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 1/133 (0%)
Query: 103 DPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAK 162
D T W + + + S+ D+ I + + I +G +P ++R LP ++ A+ +
Sbjct: 369 DVPSTHW-SKKDLRSMTDRDWRIFKEDFNISTKGGSIPNPIRTWRESSLPADMLEAIAKQ 427
Query: 163 GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPY 222
G +KP+P+Q+Q IP ALSGRD++GIA TGSGKT FV+P+L++ +Q +GPY
Sbjct: 428 GYEKPSPVQMQAIPVALSGRDVLGIAETGSGKTAAFVIPMLVYISKQPRMTKESEQDGPY 487
Query: 223 GLIICPSRELARQ 235
+++ P+RELA Q
Sbjct: 488 AVVMAPTRELALQ 500
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKT FV+P+L++ +Q +GPY +++ P+RELA Q
Sbjct: 445 SGRDVLGIAETGSGKTAAFVIPMLVYISKQPRMTKESEQDGPYAVVMAPTRELALQIEKE 504
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L RT +GG P+ + + + KG +
Sbjct: 505 ARVFANFL--GYRTVALVGGQPIEEQIYQLSKGCE 537
>gi|357445503|ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
gi|355482077|gb|AES63280.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
Length = 1148
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP S+ L ++ ++ +KP PIQ Q +P +SGRD IG
Sbjct: 516 RKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIG 575
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
+A TGSGKTL FVLP+L +Q P + G+GP GLI+ P+REL +Q H I+ +
Sbjct: 576 VAKTGSGKTLAFVLPMLRHIKDQP---PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKV 632
Query: 247 LPI 249
+ I
Sbjct: 633 MGI 635
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IG+A TGSGKTL FVLP+L +Q P + G+GP GLI+ P+REL +Q H
Sbjct: 569 SGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP---PVVVGDGPIGLIMAPTRELVQQIHSD 625
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + I R GG + Q + +K+G +
Sbjct: 626 IRKFTKVMGI--RCVPVYGGSGVAQQISELKRGTE 658
>gi|50927797|gb|AAH79483.1| Ddx42 protein [Danio rerio]
Length = 402
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+RR L + V G P SF E L+ + +PTPIQ QG+P ALSGRD I
Sbjct: 237 LRRKLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAI 296
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
GIA TGSGKT F+ PIL+ ++Q+ PGEGP +I+CP+REL +Q H
Sbjct: 297 GIAKTGSGKTAAFIWPILVHIMDQKE---LEPGEGPIAVIVCPTRELCQQIH 345
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKT F+ PIL+ ++Q+ PGEGP +I+CP+REL +Q H
Sbjct: 291 SGRDAIGIAKTGSGKTAAFIWPILVHIMDQKE---LEPGEGPIAVIVCPTRELCQQIHAE 347
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 348 CKRFGKAY--GLRSVAVYGGGSMWEQAKALQEGAE 380
>gi|195376889|ref|XP_002047225.1| GJ13322 [Drosophila virilis]
gi|194154383|gb|EDW69567.1| GJ13322 [Drosophila virilis]
Length = 797
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 4/119 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
+QV ++ RR L + V G P SF E L++++ +PTPIQ Q +PAAL
Sbjct: 256 EQVREL-RRTLGVKVSGALPPKPVSSFGHFGFDEQLLKSVRKAEYTQPTPIQAQAVPAAL 314
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
SGRDIIGIA TGSGKT F+ P+L ++Q PG+GP GLI+ P+REL+ Q ++
Sbjct: 315 SGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRE---LRPGDGPIGLILAPTRELSLQIYN 370
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L ++Q PG+GP GLI+ P+REL+ Q ++
Sbjct: 315 SGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRE---LRPGDGPIGLILAPTRELSLQIYNE 371
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 372 AKKFGKVYNINVVCCYG-GGSKWEQS 396
>gi|241172335|ref|XP_002410726.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215494955|gb|EEC04596.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 658
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I Y + K ++ I +L + D +R L + V G P SF + E ++RA
Sbjct: 137 ISYKEFTKNFYQEHEEIAALSPEEVDALRATLGVKVTGPLPPKPVTSFAHLGFDEPMLRA 196
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +P+PIQ QG+P A+SGRD+IGIA TGSGKT F+ P+L ++Q + G
Sbjct: 197 IRKAEYTQPSPIQAQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLTHIMDQRE---LVEG 253
Query: 219 EGPYGLIICPSRELARQ 235
EGP GLI+ P+RELA+Q
Sbjct: 254 EGPIGLILAPTRELAQQ 270
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 61
+ RD+IGIA TGSGKT F+ P+L ++Q + GEGP GLI+ P+RELA+Q
Sbjct: 218 SGRDMIGIAKTGSGKTAAFIWPMLTHIMDQRE---LVEGEGPIGLILAPTRELAQQ 270
>gi|115474897|ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|75328149|sp|Q84UQ1.1|RH42_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|29467560|dbj|BAC66730.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|37806159|dbj|BAC99664.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113623014|dbj|BAF22959.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|218200507|gb|EEC82934.1| hypothetical protein OsI_27901 [Oryza sativa Indica Group]
gi|222639953|gb|EEE68085.1| hypothetical protein OsJ_26125 [Oryza sativa Japonica Group]
Length = 1049
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/123 (43%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + V G DVP ++ L L+ ++ G +KP IQ Q +P +SGRD IG
Sbjct: 407 RKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIG 466
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q +PG+GP GLI+ P+REL Q H I+ + A
Sbjct: 467 IAKTGSGKTLAFVLPMLRHVKDQPA---VVPGDGPIGLIMAPTRELVVQIHSDIKKFSKA 523
Query: 247 LPI 249
L I
Sbjct: 524 LGI 526
Score = 76.6 bits (187), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q +PG+GP GLI+ P+REL Q H
Sbjct: 460 SGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPA---VVPGDGPIGLIMAPTRELVVQIHSD 516
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + AL I C+AI GG + Q + +K+G +
Sbjct: 517 IKKFSKALGI---NCVAIYGGSGVAQQISELKRGAE 549
>gi|345487283|ref|XP_001603249.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Nasonia
vitripennis]
Length = 793
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
I +L Q D +R+ L I V G P SF +SL++++ +PTPIQ Q
Sbjct: 226 IANLNKQQIDELRKTLGIKVTGPAPPNPVTSFGHFGFDDSLIKSIRKHEYTQPTPIQAQS 285
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IP ALSGRD+IGIA TGSGKT FV P+L+ ++Q+ G+GP GLI+ P+REL++
Sbjct: 286 IPVALSGRDLIGIAKTGSGKTAAFVWPMLVHIMDQKE---LDSGDGPIGLILAPTRELSQ 342
Query: 235 QTH 237
Q +
Sbjct: 343 QIY 345
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT FV P+L+ ++Q+ G+GP GLI+ P+REL++Q +
Sbjct: 291 SGRDLIGIAKTGSGKTAAFVWPMLVHIMDQKE---LDSGDGPIGLILAPTRELSQQIYHE 347
Query: 66 IQYYCAALPIPLRTCLAIGG 85
+ + I R C GG
Sbjct: 348 AKKFGKVYNI--RVCCCYGG 365
>gi|307109616|gb|EFN57854.1| hypothetical protein CHLNCDRAFT_6836, partial [Chlorella
variabilis]
Length = 461
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
GI Y++ K + I +L RR L + V G D P +F+ L+
Sbjct: 17 GIAYSEFNKDFYEEAPDIAALTHAQVAEYRRQLGMRVSGFDAPRPIQTFKQCGFDGPLMA 76
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL- 216
A+ G +KPT IQ Q +PAAL GRD++GIA TGSGKT FVLP+++ ++Q P L
Sbjct: 77 AITKAGYQKPTAIQAQALPAALCGRDVLGIAKTGSGKTAAFVLPMIVHIMDQ----PELQ 132
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAALPIG 250
GEGP G+I+ P+RELA Q H + + A +G
Sbjct: 133 KGEGPIGVIVAPTRELAEQIHKETRRFSKAYNLG 166
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKT FVLP+++ ++Q P L GEGP G+I+ P+RELA Q H
Sbjct: 101 RDVLGIAKTGSGKTAAFVLPMIVHIMDQ----PELQKGEGPIGVIVAPTRELAEQIHKET 156
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + A + + A GG+ +Q +K G
Sbjct: 157 RRFSKAYNLGV--AAAFGGLSKHQQFKDLKAG 186
>gi|290972392|ref|XP_002668937.1| predicted protein [Naegleria gruberi]
gi|284082475|gb|EFC36193.1| predicted protein [Naegleria gruberi]
Length = 898
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 52/116 (44%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V G D+PP ++ L ++++ LE G KP IQ Q +P +SGR+IIGIA TG
Sbjct: 367 IKVHGHDIPPPVKTWTQCGLNDTILGVLETHGYTKPFAIQSQALPCIMSGRNIIGIAKTG 426
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
SGKTL FVLP+L L+Q P +GP G+++ P+RELA Q H I+ + A L
Sbjct: 427 SGKTLAFVLPMLRHVLDQP---PLKTVDGPIGIVMAPTRELAMQIHSDIEKFSAPL 479
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ R+IIGIA TGSGKTL FVLP+L L+Q P +GP G+++ P+RELA Q H
Sbjct: 415 SGRNIIGIAKTGSGKTLAFVLPMLRHVLDQP---PLKTVDGPIGIVMAPTRELAMQIHSD 471
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
I+ + A P+ L+T GG + + + ++K G
Sbjct: 472 IEKFSA--PLMLKTACVYGGAGIAEQIALLKNG 502
>gi|168059277|ref|XP_001781630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666944|gb|EDQ53586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1072
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP ++ L ++ ++ G +KP PIQ Q +P +SGRD IG
Sbjct: 461 RKELELKIRGKDVPRPLKTWNQTGLNSKVLDVIKKSGFEKPMPIQTQALPIIMSGRDCIG 520
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
IA TGSGKTL FVLP+L ++Q P G+GP GLI+ P+REL +Q ++ I+ +
Sbjct: 521 IAKTGSGKTLAFVLPMLRHIMDQP---PLQQGDGPIGLIMAPTRELVQQIYNDIRKF 574
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L ++Q P G+GP GLI+ P+REL +Q ++
Sbjct: 514 SGRDCIGIAKTGSGKTLAFVLPMLRHIMDQP---PLQQGDGPIGLIMAPTRELVQQIYND 570
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + + + TC+ + GG + Q + +K+G +
Sbjct: 571 IRKFSKVVGL---TCVPVYGGSGVAQQISDLKRGTE 603
>gi|429329363|gb|AFZ81122.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 732
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 96 KKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESL 155
KK + + I + + + D+ I R + I + G VPP ++ LP L
Sbjct: 263 KKSSELDTNIANTHWTQKKREDMTDRDWRIFREDFDIYIRGGRVPPPIRTWAESPLPWEL 322
Query: 156 VRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF 215
+ A++ G KPTPIQ+Q IP AL RD+IGIA TGSGKT FVLP+L + LP
Sbjct: 323 LEAIKKAGYSKPTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYV----KSLPP 378
Query: 216 LPGE----GPYGLIICPSRELARQTHDIIQYYCA 245
L E GPY LI+ PSRELA Q D + A
Sbjct: 379 LNDETGQDGPYSLILAPSRELALQIFDETNKFAA 412
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + LP L E GPY LI+ PSRELA Q
Sbjct: 349 RDLIGIAVTGSGKTAAFVLPMLTYV----KSLPPLNDETGQDGPYSLILAPSRELALQIF 404
Query: 64 DIIQYYCA 71
D + A
Sbjct: 405 DETNKFAA 412
>gi|325185113|emb|CCA19605.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 711
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 7/156 (4%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLP-DQVHDIIRRNLRILVEGDDVPPACCSFRL 148
Q+LD K I+Y K + I S+ DQV +R L++ VEGD++P SF
Sbjct: 131 QALDHTK--IEYEAFQKNFYIPAAEIASMTTDQVK-TLRNELQLQVEGDEIPHPIQSFMQ 187
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
++L ++ L G++ PT IQ Q P ALSGRD+IGIA TGSGKTL F +P++ ++
Sbjct: 188 LQLDRKILNLLMKLGLEAPTAIQAQTFPVALSGRDMIGIAKTGSGKTLAFTIPMIWHVMD 247
Query: 209 QETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
Q GEGP ++I P+RELA Q + ++ +
Sbjct: 248 QR---ELSKGEGPIAIVISPTRELAHQIYTQVKMFT 280
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL F +P++ ++Q GEGP ++I P+RELA Q + ++
Sbjct: 221 RDMIGIAKTGSGKTLAFTIPMIWHVMDQR---ELSKGEGPIAIVISPTRELAHQIYTQVK 277
Query: 68 YYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
+ C+A+ GGV + + ++KG +
Sbjct: 278 MFTKLYGAE---CVAVYGGVGKWEQVQALRKGAE 308
>gi|388851757|emb|CCF54563.1| related to RNA helicase [Ustilago hordei]
Length = 1171
Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRLMKLPESLVR 157
+ Y K + P I + +++ + IR + I V G D P + LP S +
Sbjct: 448 VDYEPFCKVFYHPPAEIEDMSEELANQIRLEMDAIAVRGKDCPKPLIKWSHCGLPASALD 507
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ G PTPIQ Q +PA +SGRDIIG+A TGSGKT+ F+LP+ +Q P P
Sbjct: 508 VIKKLGYAAPTPIQSQAVPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQR---PVEP 564
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGP G+I+ P+RELA Q + ++ + AL
Sbjct: 565 SEGPIGIIMTPTRELAVQIYREMRPFIKAL 594
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIG+A TGSGKT+ F+LP+ +Q P P EGP G+I+ P+RELA Q +
Sbjct: 530 SGRDIIGVAKTGSGKTMAFLLPMFRHIKDQR---PVEPSEGPIGIIMTPTRELAVQIYRE 586
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKK 97
++ + AL LR GG P+++ + +KK
Sbjct: 587 MRPFIKAL--GLRAACVYGGAPISEQIAEMKK 616
>gi|410903051|ref|XP_003965007.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Takifugu
rubripes]
Length = 872
Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R+ L + V G P SF E L+ + +PTPIQ QG+P ALSGRD+I
Sbjct: 228 LRQKLNLRVSGAAPPKPSTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMI 287
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
GIA TGSGKT F+ P+L+ ++Q+ GEGP +I+CP+REL +Q H
Sbjct: 288 GIAKTGSGKTAAFIWPMLVHIMDQKE---LEAGEGPIAVIVCPTRELCQQIH 336
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ GEGP +I+CP+REL +Q H
Sbjct: 282 SGRDMIGIAKTGSGKTAAFIWPMLVHIMDQKE---LEAGEGPIAVIVCPTRELCQQIHAE 338
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 339 CKRFGKAY--SLRSVAVYGGGSMWEQAKALQEGAE 371
>gi|384498823|gb|EIE89314.1| hypothetical protein RO3G_14025 [Rhizopus delemar RA 99-880]
Length = 674
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K + + I +L D+ + + + + V G ++P C SF E L+ + G
Sbjct: 211 KNFYEEHQDIAALDDERVKALLQEMGLRVSGYNIPKPCISFAHFGFDEDLMNTIIKAGYT 270
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLI 225
+P+ IQ Q IPAALSGRD+IGIA TGSGKT FVLP+L+ ++Q + G+GP GLI
Sbjct: 271 EPSAIQRQAIPAALSGRDVIGIAKTGSGKTAAFVLPMLIHIMDQP---ELVKGDGPIGLI 327
Query: 226 ICPSRELARQTHDIIQYYCAA 246
+ P+RELA Q + + + A
Sbjct: 328 LAPTRELAIQIYQETRKFAKA 348
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKT FVLP+L+ ++Q + G+GP GLI+ P+RELA Q + +
Sbjct: 287 RDVIGIAKTGSGKTAAFVLPMLIHIMDQP---ELVKGDGPIGLILAPTRELAIQIYQETR 343
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ A L+ GG + ++ G
Sbjct: 344 KFAKAY--GLKVAAVYGGASKLEQFKDLRSG 372
>gi|403223854|dbj|BAM41984.1| DEAD-box family RNA-dependent helicase [Theileria orientalis strain
Shintoku]
Length = 587
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 133 LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGS 192
+V G DVP F P+ ++ ++E G K+PTPIQVQ P ALSGRD+IGIA TGS
Sbjct: 139 VVSGKDVPNPVVKFEQTSFPKYILSSIEQAGFKEPTPIQVQSWPVALSGRDMIGIAETGS 198
Query: 193 GKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
GKTL F+LP ++ Q PG+GP L++ P+RELA Q D
Sbjct: 199 GKTLAFLLPAIVHINAQSL---LRPGDGPIVLVLAPTRELAEQIKD 241
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+RELA Q D
Sbjct: 188 RDMIGIAETGSGKTLAFLLPAIVHINAQSL---LRPGDGPIVLVLAPTRELAEQIKDTAV 244
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I +T +A GGVP + +K+G++
Sbjct: 245 TFGKSSKI--KTSVAYGGVPKKLQIINLKRGVE 275
>gi|156084974|ref|XP_001609970.1| p68-like protein [Babesia bovis]
gi|154797222|gb|EDO06402.1| p68-like protein [Babesia bovis]
Length = 529
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 124 DIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +R+ I ++ G DVP SF P+ +++A+ A G PTPIQVQG P ALSGR
Sbjct: 87 DRVRKEREITIIAGRDVPKPVVSFEHTSFPDYILKAIRAAGFTAPTPIQVQGWPIALSGR 146
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
D+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+REL Q
Sbjct: 147 DVIGIAETGSGKTLAFLLPAVVHINAQHL---LRPGDGPIVLVLAPTRELVEQ 196
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+REL Q
Sbjct: 144 SGRDVIGIAETGSGKTLAFLLPAVVHINAQHL---LRPGDGPIVLVLAPTRELVEQIRQQ 200
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I ++ +A GGVP Q + +K+G++
Sbjct: 201 CVQFGASSRI--KSSVAYGGVPKRQQMYELKRGVE 233
>gi|397646742|gb|EJK77411.1| hypothetical protein THAOC_00764 [Thalassiosira oceanica]
Length = 418
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 7/161 (4%)
Query: 88 MNQSLD---VIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACC 144
MN+ + V ++Y K + PR + L + R + + V G P
Sbjct: 207 MNKKRELRSVDHGSVEYLAVRKNLYTVPRSLAGLGPEEVAARRARIGVRVRGRGAPAPVS 266
Query: 145 SFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILM 204
SF L E LV L+ +GI +P P+Q Q IPA ++GRD+IGIA TGSGKTL FVLP+L
Sbjct: 267 SFGEAGLSEKLVGLLDRRGITEPFPVQAQCIPAIMAGRDVIGIAKTGSGKTLAFVLPMLR 326
Query: 205 FCLEQETKLPFLPGE-GPYGLIICPSRELARQTHDIIQYYC 244
L+Q P GE GP GL++ P+RELA Q H + + C
Sbjct: 327 HILDQP---PLAVGETGPIGLVLAPARELAYQIHIVCKGLC 364
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE-GPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL FVLP+L L+Q P GE GP GL++ P+RELA Q H +
Sbjct: 304 RDVIGIAKTGSGKTLAFVLPMLRHILDQP---PLAVGETGPIGLVLAPARELAYQIHIVC 360
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ C I LR+ GG + + + +K+G
Sbjct: 361 KGLCKH--IGLRSTAVYGGAGVAEQIGDLKRGTH 392
>gi|149242263|ref|XP_001526437.1| hypothetical protein LELG_02995 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032665|sp|A5E058.1|PRP5_LODEL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|146450560|gb|EDK44816.1| hypothetical protein LELG_02995 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 994
Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/153 (37%), Positives = 91/153 (59%), Gaps = 5/153 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRLMKLPESLVR 157
I+Y K ++ P + ++ ++ D++R L + G +VPP ++ + +PES++
Sbjct: 341 IEYPKFRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMS 400
Query: 158 ALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
++ G KP+PIQ Q IP LSGRD+IG+A TGSGKTL +VLP++ Q+ P
Sbjct: 401 VIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHI--QDQLFP-K 457
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
PGEGP GL++ P+RELA Q I + + + +
Sbjct: 458 PGEGPIGLVLSPTRELALQIEKEILKFSSTMDL 490
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKTL +VLP++ Q+ P PGEGP GL++ P+RELA Q
Sbjct: 424 SGRDMIGVAKTGSGKTLSYVLPMVRHI--QDQLFP-KPGEGPIGLVLSPTRELALQIEKE 480
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGI 99
I + + + L+ C GG + + +K+G+
Sbjct: 481 ILKFSSTM--DLKVCCCYGGSNIENQISELKRGV 512
>gi|294892441|ref|XP_002774065.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239879269|gb|EER05881.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 674
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 7/126 (5%)
Query: 112 PRCILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPI 170
PR P++V D +RR L I ++ G++VP +F LP+ +++ + G +KPTPI
Sbjct: 180 PRVAAMTPEEV-DQVRRTLDIEILRGENVPNPIQTFDEACLPDYILKEINRAGFEKPTPI 238
Query: 171 QVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPS 229
QVQG P ALSGRD++GIA TGSGKTL F++P ++ Q P+L G+GP LI+ P+
Sbjct: 239 QVQGWPVALSGRDMVGIAETGSGKTLAFMIPAVIHINAQ----PYLQKGDGPIVLILAPT 294
Query: 230 RELARQ 235
RELA Q
Sbjct: 295 RELALQ 300
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 5/57 (8%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 61
+ RD++GIA TGSGKTL F++P ++ Q P+L G+GP LI+ P+RELA Q
Sbjct: 248 SGRDMVGIAETGSGKTLAFMIPAVIHINAQ----PYLQKGDGPIVLILAPTRELALQ 300
>gi|8489871|gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]
Length = 622
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 81 LAIGGVPMNQSLDVIKKGIQYNDPIKTSWR-APRCILSLPDQVHDIIRRNLRILVEGDDV 139
LA G + + I + + D + +W+ + R PDQ+ +++R NL + V D
Sbjct: 52 LANGSRRTSAATSAISELVTVPDTVFPNWQPSERVSRMNPDQIEEVVRLNLDVTVSSDST 111
Query: 140 --PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLV 197
P SF M L S+++ + +P+ IQ Q +P ALSGRD++G A TGSGKT
Sbjct: 112 AAPGPIESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAA 171
Query: 198 FVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
F +P+L CL Q P G+GP L++ P+RELA+Q +Q + +L
Sbjct: 172 FTIPMLQHCLVQP---PIRRGDGPLALVLAPTRELAQQIEKEVQAFSRSL 218
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++G A TGSGKT F +P+L CL Q P G+GP L++ P+RELA+Q +Q
Sbjct: 156 RDLLGCAETGSGKTAAFTIPMLQHCLVQP---PIRRGDGPLALVLAPTRELAQQIEKEVQ 212
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +L L+ C+ +GG + + ++ G++
Sbjct: 213 AFSRSLE-SLKNCIVVGGTNIEKQRSELRAGVE 244
>gi|242051719|ref|XP_002455005.1| hypothetical protein SORBIDRAFT_03g002860 [Sorghum bicolor]
gi|241926980|gb|EES00125.1| hypothetical protein SORBIDRAFT_03g002860 [Sorghum bicolor]
Length = 488
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ + ++ + RR I VEG DVP FR + PE +++ + G +PTPIQ Q
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVLEFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTREL 176
Query: 233 ARQTHDIIQYYCAALPIGS 251
A Q + A+ I S
Sbjct: 177 AVQIQQEATKFGASSKIKS 195
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQIQQEA 184
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 185 TKFGASSKIK-STCI-YGGVPKGPQVRDLQKGVE 216
>gi|297833724|ref|XP_002884744.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
gi|297330584|gb|EFH61003.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
Length = 930
Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 3/151 (1%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K + + I + V + R+ L + V G DVP ++ L ++
Sbjct: 292 IEYEPFRKNFYIEVKDISRMTQDVVNAYRKELELKVHGKDVPRPIKAWHQTGLTSKILDT 351
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
L+ KP PIQ Q +P +SGRD IGIA TGSGKTL FVLP+L +Q P G
Sbjct: 352 LKKLNYVKPMPIQAQALPIIMSGRDCIGIANTGSGKTLAFVLPMLRHIKDQP---PIEAG 408
Query: 219 EGPYGLIICPSRELARQTHDIIQYYCAALPI 249
+GP GL++ P+REL +Q H I+ + AL +
Sbjct: 409 DGPIGLVMAPTRELVQQIHSDIKRFAKALGV 439
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 27/197 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q H
Sbjct: 373 SGRDCIGIANTGSGKTLAFVLPMLRHIKDQP---PIEAGDGPIGLVMAPTRELVQQIHSD 429
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
I+ + AL + C+A+ GG + Q ++ +K+G + + T R + + ++ +
Sbjct: 430 IKRFAKALGV---RCVAVYGGSGVAQQINELKRGTEI--VVCTPGRMIDVLCTSSGKITN 484
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESL----------------VRALEAKGIKKPT 168
+ R ++ E D + ++ ++ +++ V L K + KP
Sbjct: 485 LRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVVDKPV 544
Query: 169 PIQVQGIPAALSGRDII 185
IQV G ++ +DII
Sbjct: 545 EIQVGG--RSVVNKDII 559
>gi|225442260|ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
gi|297743075|emb|CBI35942.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ ++ + R I VEG DVP +FR + LPE +++ + G +PTPIQ Q
Sbjct: 70 AVAAMSEKEVEQYRERREITVEGRDVPKPVMNFRDVGLPEYVMQEITKAGFAEPTPIQAQ 129
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 130 GWPMALKGRDVIGIAETGSGKTLAYLLPAIIHVNAQ----PILAPGDGPIVLVLAPTREL 185
Query: 233 ARQTHDIIQYYCAALPI 249
A Q + A+ I
Sbjct: 186 AVQIQQEAAKFGASSRI 202
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 136 KGRDVIGIAETGSGKTLAYLLPAIIHVNAQ----PILAPGDGPIVLVLAPTRELAVQIQQ 191
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 192 EAAKFGASSRIK-NTCIH-GGVPKGPQIRDLQKGVE 225
>gi|71028514|ref|XP_763900.1| small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68350854|gb|EAN31617.1| small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 744
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G VPP ++ LP L+ A++ G KPTPIQ+Q IP AL RD+
Sbjct: 310 IFREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDL 369
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FVLP+L + KLP L E GPY L++ PSRELA Q +D
Sbjct: 370 IGIAVTGSGKTAAFVLPMLTYV----KKLPPLDDETSLDGPYALVLAPSRELALQIYDET 425
Query: 241 QYYCA 245
+ A
Sbjct: 426 VKFSA 430
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + KLP L E GPY L++ PSRELA Q +
Sbjct: 367 RDLIGIAVTGSGKTAAFVLPMLTYV----KKLPPLDDETSLDGPYALVLAPSRELALQIY 422
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + A R+ +GG ++KG
Sbjct: 423 DETVKFSAF--CSCRSVAVVGGRNAETQAFELRKG 455
>gi|195021550|ref|XP_001985416.1| GH17046 [Drosophila grimshawi]
gi|193898898|gb|EDV97764.1| GH17046 [Drosophila grimshawi]
Length = 811
Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats.
Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
DQV ++ RR L + V G P SF + L++++ +PTPIQ Q +P AL
Sbjct: 269 DQVREL-RRTLGVKVSGALPPKPVSSFGHFGFDDQLLKSVRKAEYTQPTPIQAQAVPTAL 327
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
SGRDIIGIA TGSGKT F+ P+L ++Q PG+GP GLI+ P+REL+ Q ++
Sbjct: 328 SGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRE---LRPGDGPIGLILAPTRELSLQIYN 383
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RDIIGIA TGSGKT F+ P+L ++Q PG+GP GLI+ P+REL+ Q
Sbjct: 325 TALSGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRE---LRPGDGPIGLILAPTRELSLQI 381
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQS 91
++ + + I + C GG QS
Sbjct: 382 YNEAKKFGKVYNINVVCCYG-GGSKWEQS 409
>gi|390354880|ref|XP_003728430.1| PREDICTED: ATP-dependent RNA helicase DDX42-like
[Strongylocentrotus purpuratus]
Length = 892
Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R+ L I V G D P SF E L+ + PTPIQ QG+P A+ GRD+I
Sbjct: 135 LRQKLNIKVSGADPPKPVTSFAHFGFDEQLMHCIRKSDFSSPTPIQAQGVPIAMCGRDVI 194
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
GIA TGSGKT FV P+L+ ++Q G+GP GLI P+RELA+Q + ++ +
Sbjct: 195 GIAKTGSGKTAAFVWPMLVHIMDQRA---IKKGDGPIGLICAPTRELAQQIYMEVKKFGK 251
Query: 246 ALPI 249
A I
Sbjct: 252 AYNI 255
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 21/127 (16%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKT FV P+L+ ++Q G+GP GLI P+RELA+Q + ++
Sbjct: 191 RDVIGIAKTGSGKTAAFVWPMLVHIMDQRA---IKKGDGPIGLICAPTRELAQQIYMEVK 247
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIR 127
+ A I A GG M++ ++G P I++ P ++ D+++
Sbjct: 248 KFGKAYNI--HVVCAYGGGNMHEQQRACEEG-------------PEVIVATPGRLIDLVK 292
Query: 128 R---NLR 131
+ NLR
Sbjct: 293 KKATNLR 299
>gi|258617566|gb|ACV83780.1| DEAD box ATP-dependent RNA helicase-like protein [Heliconius
melpomene]
Length = 646
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
D+V ++ R I V G+DVP F P+ ++ ++ +G ++PT IQ QG P AL
Sbjct: 212 DEV-EMFRATKEITVSGNDVPRPNQVFDEGNFPDHIMNTIKEQGWEEPTGIQAQGWPIAL 270
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
SGRD++GIA TGSGKTL ++LP + + Q+ G+GP LI+ P+RELA+Q +
Sbjct: 271 SGRDMVGIASTGSGKTLAYMLPAAVHIVHQQR---IQRGDGPIALILAPTRELAQQIQSV 327
Query: 240 IQYYCA 245
Q Y A
Sbjct: 328 AQAYSA 333
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++LP + + Q+ G+GP LI+ P+RELA+Q + Q
Sbjct: 273 RDMVGIASTGSGKTLAYMLPAAVHIVHQQR---IQRGDGPIALILAPTRELAQQIQSVAQ 329
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A I TCL GG P +++G++
Sbjct: 330 AYSAHGCI-RNTCL-FGGSPKGPQARDLERGVE 360
>gi|143361556|sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
Length = 494
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ + ++ + RR I VEG DVP FR + PE +++ + G +PTPIQ Q
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTREL 176
Query: 233 ARQTHDIIQYYCAALPIGS 251
A Q + A+ I S
Sbjct: 177 AVQIQQEATKFGASSKIKS 195
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQIQQEA 184
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 185 TKFGASSKIK-STCI-YGGVPKGPQVRDLQKGVE 216
>gi|348677782|gb|EGZ17599.1| hypothetical protein PHYSODRAFT_300617 [Phytophthora sojae]
Length = 841
Score = 99.8 bits (247), Expect = 9e-19, Method: Composition-based stats.
Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
SL +Q +R L + V+G DVP SF + ++ L G++ PT IQ Q P
Sbjct: 112 SLSNQEVAKLRLELSVKVDGSDVPAPVQSFMHLGFDRKMLHTLMKLGLEAPTAIQAQAFP 171
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 236
ALSGRD+IGIA TGSGKTL F LP++ ++Q GEGP +++ P+RELA QT
Sbjct: 172 VALSGRDLIGIAKTGSGKTLAFTLPMVCHVMDQRE---LQRGEGPIAVVLAPTRELAHQT 228
Query: 237 H 237
+
Sbjct: 229 Y 229
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F LP++ ++Q GEGP +++ P+RELA QT+
Sbjct: 175 SGRDLIGIAKTGSGKTLAFTLPMVCHVMDQRE---LQRGEGPIAVVLAPTRELAHQTYVQ 231
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
+ + A +C AI GG + + +KKG++
Sbjct: 232 AKKFLAVYGA---SCAAIYGGAGKWEQVQALKKGVE 264
>gi|198432373|ref|XP_002121386.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
[Ciona intestinalis]
Length = 727
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K +R I SL + D +RR L I V G P SF E ++ A+
Sbjct: 205 KNFYREHDEIKSLTNDGVDSLRRRLGIKVSGFFPPKPVSSFGHFGFDEKIISAIRKHNFT 264
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
+PTPIQ QGIP +SGRD+IGIA TGSGKT F+ P+L+ ++Q P L G+GP GL
Sbjct: 265 QPTPIQAQGIPCGMSGRDVIGIAKTGSGKTAAFIWPMLVHIMDQ----PELKKGDGPVGL 320
Query: 225 IICPSRELARQ 235
I+ P+REL +Q
Sbjct: 321 IVAPTRELCQQ 331
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKT F+ P+L+ ++Q P L G+GP GLI+ P+REL +Q I
Sbjct: 281 RDVIGIAKTGSGKTAAFIWPMLVHIMDQ----PELKKGDGPVGLIVAPTRELCQQ----I 332
Query: 67 QYYCAALP--IPLRTCLAIGGVPMNQSLDVIKKG 98
+ C LR+ GG M++ + G
Sbjct: 333 YFECKRFGKVYGLRSVCCYGGGNMHEQQKGLSDG 366
>gi|242023199|ref|XP_002432023.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212517381|gb|EEB19285.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 755
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + D+V++ R + I V G +VP +F P +++ ++ +G KPT IQ
Sbjct: 112 PNVLKRTDDEVNEY-RELMEITVNGKNVPNPNQTFEESNFPANVMAVIKKQGFLKPTAIQ 170
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
QG P ALSGRD++GIA TGSGKTL + LP + Q+ P G+GP L++ P+RE
Sbjct: 171 AQGWPIALSGRDMVGIAQTGSGKTLAYALPATVHITNQK---PLSKGDGPIALVLAPTRE 227
Query: 232 LARQTHDIIQYYCAALPI 249
LA+Q + + + A+ I
Sbjct: 228 LAQQIQSVAKDFGASCSI 245
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL + LP + Q+ P G+GP L++ P+RELA+Q + +
Sbjct: 181 RDMVGIAQTGSGKTLAYALPATVHITNQK---PLSKGDGPIALVLAPTRELAQQIQSVAK 237
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GG P +++G++
Sbjct: 238 DFGASCSI-RNTCI-FGGAPKGSQARDLERGVE 268
>gi|326435582|gb|EGD81152.1| ATP-dependent RNA helicase DBP2 [Salpingoeca sp. ATCC 50818]
Length = 553
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K ++ L++ D R +I V G +VP F P ++ L ++G +
Sbjct: 92 KNFYKEHEATLNMTDSDVQAFRSESKITVHGREVPRPVTRFEHANFPRYIMDVLSSQGFE 151
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
KPTPIQ QG P AL GR++IGIA TGSGKTL F+LP ++ Q P L PG+GP L
Sbjct: 152 KPTPIQAQGWPMALKGRNMIGIADTGSGKTLSFILPGIVHINHQ----PLLKPGDGPIVL 207
Query: 225 IICPSRELARQTHDIIQYYCAALPIGS 251
++ P+RELA+Q + Y ++ I S
Sbjct: 208 VLAPTRELAQQIGQVAFQYGSSSRIQS 234
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
R++IGIA TGSGKTL F+LP ++ Q P L PG+GP L++ P+RELA+Q +
Sbjct: 168 RNMIGIADTGSGKTLSFILPGIVHINHQ----PLLKPGDGPIVLVLAPTRELAQQIGQVA 223
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y ++ I TC+ GG P + +++G++
Sbjct: 224 FQYGSSSRIQ-STCV-FGGAPRGRQARELQRGVE 255
>gi|82539888|ref|XP_724299.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii 17XNL]
gi|23478899|gb|EAA15864.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii]
Length = 967
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I ++G VPP + L L++A++ +KPTPIQ+Q IP
Sbjct: 517 MTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPI 576
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELA 233
AL RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA
Sbjct: 577 ALEMRDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALIIAPSRELA 632
Query: 234 RQTHD 238
Q +D
Sbjct: 633 IQIYD 637
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA Q +
Sbjct: 581 RDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALIIAPSRELAIQIY 636
Query: 64 D---IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
D YC+ RT +GG +++G++
Sbjct: 637 DETNKFASYCSC-----RTVAVVGGRNAEAQAFELRRGVE 671
>gi|158300606|ref|XP_320481.4| AGAP012045-PA [Anopheles gambiae str. PEST]
gi|157013241|gb|EAA00456.4| AGAP012045-PA [Anopheles gambiae str. PEST]
Length = 910
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R ++I V G++VP C +F PE ++ ++ +G +PT IQ QG P ALSGRD++G
Sbjct: 208 REQMQITVMGNNVPHPCQNFEEGNFPEYVMTEIKKQGFPRPTAIQSQGWPIALSGRDMVG 267
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 241
IA TGSGKTL ++LP L+ Q+ P GEGP L++ P+RELA+Q +++
Sbjct: 268 IAQTGSGKTLAYMLPGLVHISHQK---PLSRGEGPIVLVLAPTRELAQQIQTVVR 319
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP L+ Q+ P GEGP L++ P+RELA+Q +
Sbjct: 261 SGRDMVGIAQTGSGKTLAYMLPGLVHISHQK---PLSRGEGPIVLVLAPTRELAQQIQTV 317
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + +R GG + +++G++
Sbjct: 318 VRDFGNHSKPNIRYTCVFGGALKGPQVRDLERGVE 352
>gi|281206116|gb|EFA80305.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 858
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 69/111 (62%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I +G +P S+R LP ++ A+ G +KP+PIQ+Q IP AL GRD+
Sbjct: 413 IFREDFNISTKGSGIPNPMRSWRESILPREILEAIAKMGYEKPSPIQMQAIPIALWGRDV 472
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
+GIA TGSGKT FV+P+L++ +Q +GPY L++ P+RELA Q
Sbjct: 473 LGIAETGSGKTAAFVIPMLVYISKQPRLNKETEADGPYALVMAPTRELALQ 523
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKT FV+P+L++ +Q +GPY L++ P+RELA Q +
Sbjct: 470 RDVLGIAETGSGKTAAFVIPMLVYISKQPRLNKETEADGPYALVMAPTRELALQIEKEAR 529
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A R +GG P+ + + KG +
Sbjct: 530 NF--ANHFGFRCVALVGGQPIEDQIFQLSKGCE 560
>gi|71005310|ref|XP_757321.1| hypothetical protein UM01174.1 [Ustilago maydis 521]
gi|74703958|sp|Q4PFD9.1|PRP5_USTMA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|46096725|gb|EAK81958.1| hypothetical protein UM01174.1 [Ustilago maydis 521]
Length = 1156
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 4/151 (2%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRLMKLPESLV 156
I Y K + P I + +++ + IR + I V G D P + LP S +
Sbjct: 429 AIDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCL 488
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
++ G PTPIQ Q +PA +SGRDIIG+A TGSGKT+ F+LP+ +Q P
Sbjct: 489 DVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQR---PVE 545
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
P EGP G+I+ P+RELA Q + ++ + AL
Sbjct: 546 PSEGPVGIIMTPTRELAVQIYREMRPFIKAL 576
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 1 MVTYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 60
M + RDIIG+A TGSGKT+ F+LP+ +Q P P EGP G+I+ P+RELA
Sbjct: 507 MPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQR---PVEPSEGPVGIIMTPTRELAV 563
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKK 97
Q + ++ + AL LR GG P+++ + +KK
Sbjct: 564 QIYREMRPFIKAL--GLRAACVYGGAPISEQIAEMKK 598
>gi|167525138|ref|XP_001746904.1| p68DDX5 RNA helicase [Monosiga brevicollis MX1]
gi|163774684|gb|EDQ88311.1| p68DDX5 RNA helicase [Monosiga brevicollis MX1]
Length = 487
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R + +I VEG DVP +F P ++ L +G PTPIQ QG P AL+GR+++
Sbjct: 43 FRASHQISVEGRDVPKPITTFERASFPAYVMDVLMREGFSTPTPIQAQGWPMALAGRNMV 102
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
G+A TGSGKTL F+LP ++ Q P L PG+GP L++ P+RELA+Q ++ Y
Sbjct: 103 GVADTGSGKTLSFILPAIVHINNQ----PLLRPGDGPIALVLAPTRELAQQIAEVAHKYG 158
Query: 245 AALPIGS 251
++ I +
Sbjct: 159 SSSRIKT 165
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 9/95 (9%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
R+++G+A TGSGKTL F+LP ++ Q P L PG+GP L++ P+RELA+Q ++
Sbjct: 99 RNMVGVADTGSGKTLSFILPAIVHINNQ----PLLRPGDGPIALVLAPTRELAQQIAEVA 154
Query: 67 QYYCAALPIPLRTCLAIGGVPMN-QSLDVIKKGIQ 100
Y ++ I +T GG P Q++D +++G++
Sbjct: 155 HKYGSSSRI--KTTCVFGGAPKRGQAMD-LERGVE 186
>gi|358400668|gb|EHK49994.1| hypothetical protein TRIATDRAFT_161675, partial [Trichoderma
atroviride IMI 206040]
Length = 1258
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 85/149 (57%), Gaps = 8/149 (5%)
Query: 91 SLDVIKKGIQYNDPIKTS-WRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRL 148
S+D K +Q PI+ + W P + +L + +R L I V G DVP +
Sbjct: 574 SVDYSKIDLQ---PIRKNFWVEPAELNTLSEADVTDLRLELDGIKVNGKDVPKPVQKWAQ 630
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
L + + + G +KPTPIQ+Q +P+ +SGRD++G+A TGSGKT+ F+LP+ +
Sbjct: 631 CGLTRQTLDVISSLGFEKPTPIQMQALPSLMSGRDVVGVAKTGSGKTMAFLLPMFRHIKD 690
Query: 209 QETKLPFLPGEGPYGLIICPSRELARQTH 237
QE P G+GP GLI+ P+RELA Q H
Sbjct: 691 QE---PLKDGDGPIGLIMTPTRELATQIH 716
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++G+A TGSGKT+ F+LP+ +QE P G+GP GLI+ P+RELA Q H
Sbjct: 662 SGRDVVGVAKTGSGKTMAFLLPMFRHIKDQE---PLKDGDGPIGLIMTPTRELATQIHRD 718
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + LR A GG P+ + +K+G +
Sbjct: 719 CKPFLKMM--NLRAVCAYGGAPIRDQIAELKRGAE 751
>gi|390601156|gb|EIN10550.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 966
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRLMKLPESLVR 157
+QY K + AP I ++ D+ +++R L I + G D P + LP S +
Sbjct: 255 VQYEPFRKEFYIAPPDIAAMTDEDAELVRLELDSIKIRGVDCPRPVTKWSHFGLPASCLE 314
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ PTPIQ Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +Q P
Sbjct: 315 VIKRLNFTAPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEQ 371
Query: 218 GEGPYGLIICPSRELARQTH 237
EGP G+I+ P+RELA Q H
Sbjct: 372 MEGPIGVIMTPTRELAVQIH 391
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P EGP G+I+ P+RELA Q H
Sbjct: 337 SGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEQMEGPIGVIMTPTRELAVQIHRE 393
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 394 CKPFLKVL--NLRAVCAYGGSPIKDQIADMKKGAE 426
>gi|401398216|ref|XP_003880249.1| dead-box helicase family protein, related [Neospora caninum
Liverpool]
gi|325114658|emb|CBZ50214.1| dead-box helicase family protein, related [Neospora caninum
Liverpool]
Length = 856
Score = 99.0 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 10/126 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G VPP ++ LP L+ A++ ++PTPIQ+Q IP AL RD+
Sbjct: 603 IFREDFEIYIKGGRVPPPIRTWAESALPWELIEAVKHANYERPTPIQMQAIPIALEQRDL 662
Query: 185 IGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
IGIA TGSGKT FVLP+L + L +ET +GPY LI+ PSRELA Q +
Sbjct: 663 IGIAETGSGKTAAFVLPMLTYVKGLPPLNEETG-----QDGPYALILAPSRELAIQIDEE 717
Query: 240 IQYYCA 245
Q + +
Sbjct: 718 TQKFAS 723
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQT 62
RD+IGIA TGSGKT FVLP+L + L +ET +GPY LI+ PSRELA Q
Sbjct: 660 RDLIGIAETGSGKTAAFVLPMLTYVKGLPPLNEETG-----QDGPYALILAPSRELAIQI 714
Query: 63 HDIIQYYCA 71
+ Q + +
Sbjct: 715 DEETQKFAS 723
>gi|356572801|ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 768
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 5/112 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++L I V G DVP +F P ++ A++ +G +KPT IQ Q +P LSGRDIIG
Sbjct: 209 RKSLAIRVSGFDVPKPIKTFEDCGFPSQIMNAIKKQGYEKPTSIQCQALPVVLSGRDIIG 268
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 237
IA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 269 IAKTGSGKTASFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRELAHQIY 316
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 262 SGRDIIGIAKTGSGKTASFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRELAHQIYL 317
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A + R GG+ + +K G +
Sbjct: 318 EAKKFAKAYGV--RVSAVYGGMSKLEQFKELKAGCE 351
>gi|224065635|ref|XP_002301895.1| predicted protein [Populus trichocarpa]
gi|222843621|gb|EEE81168.1| predicted protein [Populus trichocarpa]
Length = 1112
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP ++ L ++ ++ +KP IQ Q +P +SGRD IG
Sbjct: 455 RKELELKLHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKPMTIQAQALPIIMSGRDCIG 514
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P GEGP GL++ P+REL +Q H I+ + A
Sbjct: 515 IAKTGSGKTLAFVLPMLRHIKDQP---PVEAGEGPIGLVMAPTRELVQQIHSDIKKFAKA 571
Query: 247 LPI 249
L I
Sbjct: 572 LSI 574
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P GEGP GL++ P+REL +Q H
Sbjct: 508 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP---PVEAGEGPIGLVMAPTRELVQQIHSD 564
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + AL I R GG + Q + +K+G +
Sbjct: 565 IKKFAKALSI--RCVPVYGGSGVAQQISELKRGTE 597
>gi|367020544|ref|XP_003659557.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
gi|347006824|gb|AEO54312.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
Length = 993
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I+ N K W P+ + + ++ +R L I V G +VP + L ++
Sbjct: 313 IELNPIRKNFWVEPQELSQMTEEEAAELRMELDGIKVSGKNVPKPVQKWSQCGLTRPILD 372
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
+E G +KPTPIQ+Q +P +SGRD+IG+A TGSGKT+ FVLP+L +Q+ P
Sbjct: 373 VIEGLGYEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKDQD---PVSG 429
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
+GP GLI+ P+REL Q + +Q + AL +
Sbjct: 430 DDGPIGLIMTPTRELCTQIYTDLQPFAKALKL 461
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ FVLP+L +Q+ P +GP GLI+ P+REL Q +
Sbjct: 395 SGRDVIGVAKTGSGKTMAFVLPMLRHIKDQD---PVSGDDGPIGLIMTPTRELCTQIYTD 451
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+Q + AL LR A GG + + +K+G +
Sbjct: 452 LQPFAKAL--KLRAVAAYGGNAIKDQIAELKRGAE 484
>gi|193573502|ref|XP_001943796.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Acyrthosiphon
pisum]
Length = 737
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 73/111 (65%), Gaps = 5/111 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R+ L + V G D+P SF ++L++ + +PTPIQ Q +PAAL+GRDII
Sbjct: 224 LRKTLGLRVNGADLPYPVTSFAHFNFDDALMKIIRKSDYVQPTPIQSQAVPAALAGRDII 283
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQ 235
GIA TGSGKTL F+ P+L+ ++Q P L G+GP GLI+ P+REL++Q
Sbjct: 284 GIAKTGSGKTLAFIWPMLVHIMDQ----PELKEGDGPVGLILAPTRELSQQ 330
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 5/55 (9%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQ 61
RDIIGIA TGSGKTL F+ P+L+ ++Q P L G+GP GLI+ P+REL++Q
Sbjct: 280 RDIIGIAKTGSGKTLAFIWPMLVHIMDQ----PELKEGDGPVGLILAPTRELSQQ 330
>gi|301101090|ref|XP_002899634.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262103942|gb|EEY61994.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 456
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
+ Y K+ + A +L Q +R L + V+G DVP SF + L +++
Sbjct: 17 VTYEPFRKSFYSAHSETCALKAQEVANLRSELDVRVDGVDVPAPVRSFMHLGLDRKMLQT 76
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
L G++ PT IQ Q P ALSGRD+IGIA TGSGKTL F LP++ ++Q G
Sbjct: 77 LMKLGLEAPTAIQTQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQR---ELQRG 133
Query: 219 EGPYGLIICPSRELARQTHDIIQYYCA 245
EGP L++ P+RELA QT+ + + A
Sbjct: 134 EGPIALVLAPTRELAHQTYVQAKKFLA 160
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F LP++ ++Q GEGP L++ P+RELA QT+
Sbjct: 98 SGRDLIGIAKTGSGKTLAFTLPMVRHVMDQR---ELQRGEGPIALVLAPTRELAHQTYVQ 154
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
+ + A +C AI GG + + +KKG++
Sbjct: 155 AKKFLAVYGA---SCAAIYGGAGKWEQVQALKKGVE 187
>gi|242080401|ref|XP_002444969.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
gi|241941319|gb|EES14464.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
Length = 946
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/125 (40%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
+ R+ L + V G DVP ++ L+ ++ G +KP PIQ Q +P +SGRD
Sbjct: 346 VYRKELELKVHGKDVPKPIKTWLQSGQTSKLLDTIKKLGFEKPMPIQAQALPVIMSGRDC 405
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
IG+A TGSGKTL F+LP+L +Q P PG+GP GLI+ P+REL Q + I+ +
Sbjct: 406 IGVAKTGSGKTLAFLLPMLRHVKDQP---PVAPGDGPVGLIVAPTRELVVQIYLDIKKFS 462
Query: 245 AALPI 249
L I
Sbjct: 463 KVLGI 467
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IG+A TGSGKTL F+LP+L +Q P PG+GP GLI+ P+REL Q +
Sbjct: 401 SGRDCIGVAKTGSGKTLAFLLPMLRHVKDQP---PVAPGDGPVGLIVAPTRELVVQIYLD 457
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + L I +C+A+ GG + Q + +K+G +
Sbjct: 458 IKKFSKVLGI---SCVAVYGGSGVAQQISELKRGAE 490
>gi|429329582|gb|AFZ81341.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 518
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 122 VHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSG 181
V +I + ++ G +VP F P ++RA+E+ G + PTPIQVQG P ALSG
Sbjct: 81 VENIRKEKEITIISGANVPKPVTKFEYTSFPNYILRAIESVGFQAPTPIQVQGWPIALSG 140
Query: 182 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
RD+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+REL Q
Sbjct: 141 RDMIGIAETGSGKTLAFLLPAIVHINAQHL---LRPGDGPIVLVLAPTRELVEQ 191
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ-THDII 66
RD+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+REL Q +
Sbjct: 141 RDMIGIAETGSGKTLAFLLPAIVHINAQHL---LRPGDGPIVLVLAPTRELVEQIRQQCL 197
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q+ ++ +++ +A GGVP + ++KG++
Sbjct: 198 QFGSSS---KIKSSVAYGGVPKRPQIVELRKGVE 228
>gi|226506900|ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea mays]
gi|194704910|gb|ACF86539.1| unknown [Zea mays]
gi|194707190|gb|ACF87679.1| unknown [Zea mays]
gi|414875847|tpg|DAA52978.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 494
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ + ++ + RR I V+G DVP FR + PE +++ + G +PTPIQ Q
Sbjct: 61 AVAGMTEEEVEAYRRRREITVDGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILSPGDGPIVLVLAPTREL 176
Query: 233 ARQTHDIIQYYCAALPIGS 251
A Q + A+ I S
Sbjct: 177 AVQIQQEATKFGASSKIKS 195
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILSPGDGPIVLVLAPTRELAVQIQQEA 184
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 185 TKFGASSKIK-STCI-YGGVPKGPQVRDLQKGVE 216
>gi|449549675|gb|EMD40640.1| hypothetical protein CERSUDRAFT_80293 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I+Y K + AP I + D D++R L I + G D P + LP S +
Sbjct: 177 IKYEPFRKEFYTAPPDIAEMTDDEADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCLE 236
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ G PTPIQ Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +Q P
Sbjct: 237 VIKKLGYTAPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEQ 293
Query: 218 GEGPYGLIICPSRELARQTH 237
EGP +++ P+RELA Q H
Sbjct: 294 MEGPVAVVMTPTRELAVQIH 313
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P EGP +++ P+RELA Q H
Sbjct: 259 SGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEQMEGPVAVVMTPTRELAVQIHRE 315
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 316 CKPFLRVL--GLRAVCAYGGSPIKDQIAEMKKGAE 348
>gi|300123821|emb|CBK25092.2| unnamed protein product [Blastocystis hominis]
Length = 512
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 74/129 (57%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
I SW+ P I +R+ +R+ V G ++PP F M+LP+ L L + +
Sbjct: 68 IHYSWKPPHNIRKHTSAEFAALRQEMRVEVTGRNLPPIIPQFHQMRLPKFLQNLLRSLSL 127
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGL 224
KPT +Q+Q IP+ L GR+I+ I+ SGK L + +P+ +F +E+E KL L EGP L
Sbjct: 128 TKPTSLQMQCIPSILQGRNILSISPHHSGKHLSYAIPLFLFSMEEEMKLQILSNEGPIAL 187
Query: 225 IICPSRELA 233
I+C SR+ A
Sbjct: 188 ILCSSRDAA 196
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
R+I+ I+ SGK L + +P+ +F +E+E KL L EGP LI+C SR+ A + +
Sbjct: 145 RNILSISPHHSGKHLSYAIPLFLFSMEEEMKLQILSNEGPIALILCSSRDAASAAYSLNH 204
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ LR L GG + ++KG+
Sbjct: 205 ALRDETRLQLRISLCCGGDSKTDQIAQLRKGVH 237
>gi|164655062|ref|XP_001728662.1| hypothetical protein MGL_4141 [Malassezia globosa CBS 7966]
gi|159102545|gb|EDP41448.1| hypothetical protein MGL_4141 [Malassezia globosa CBS 7966]
Length = 623
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 78/126 (61%), Gaps = 1/126 (0%)
Query: 125 IIRRNLRILVEG-DDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
I R + +I V G +DVPP ++R ++P +++ A+EA G ++PT IQ Q IP L RD
Sbjct: 207 IFREDYQIQVRGGEDVPPPLRTWRESRIPGAILDAIEAMGYREPTSIQRQAIPIGLIPRD 266
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
+IG+A TGSGKT FV+P+L + + Q P GPYGLI+ P+RELA Q + +
Sbjct: 267 LIGLAETGSGKTASFVVPMLAYVMAQPRMAPGDVYMGPYGLILAPTRELALQIEAETRKF 326
Query: 244 CAALPI 249
A L I
Sbjct: 327 AARLQI 332
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IG+A TGSGKT FV+P+L + + Q P GPYGLI+ P+RELA Q +
Sbjct: 265 RDLIGLAETGSGKTASFVVPMLAYVMAQPRMAPGDVYMGPYGLILAPTRELALQIEAETR 324
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIR 127
+ A L I + + +GG D+ ++ ND +++ P ++ D +
Sbjct: 325 KFAARLQIQVVSL--VGG------RDLGEQAFHLND-------GAEIVIATPGRLQDCLE 369
Query: 128 RNLRIL 133
R++ +L
Sbjct: 370 RHMLVL 375
>gi|312373386|gb|EFR21141.1| hypothetical protein AND_17503 [Anopheles darlingi]
Length = 615
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
I++LP +R L + V G P SF ESL++A+ +PTPIQ Q
Sbjct: 62 IVNLPYGKIQELRNTLGVKVSGPSPPNPVTSFAHFGFDESLMKAIRKSEYSQPTPIQAQA 121
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IPAAL GRDIIGIA TGSGKT F+ P+L+ ++Q PG+GP GLI+ P+REL+
Sbjct: 122 IPAALGGRDIIGIAKTGSGKTAAFLWPMLVHIMDQRE---LGPGDGPIGLILAPTRELS- 177
Query: 235 QTHDIIQYYCAALPIG 250
+Q Y A G
Sbjct: 178 -----LQIYGEAKKFG 188
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIA TGSGKT F+ P+L+ ++Q PG+GP GLI+ P+REL+ Q + +
Sbjct: 129 RDIIGIAKTGSGKTAAFLWPMLVHIMDQRE---LGPGDGPIGLILAPTRELSLQIYGEAK 185
Query: 68 YYCAALPIPLRTCLAIGGVPMNQS 91
+ I + C GG QS
Sbjct: 186 KFGKVYNISVCCCYG-GGSKWEQS 208
>gi|440798652|gb|ELR19719.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 906
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 76/127 (59%), Gaps = 8/127 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G VP ++ KLP L+ A+E+ G K+P PIQ+Q IP L GRD+
Sbjct: 456 IFKEDHSISTKGGRVPVPMRNWGESKLPTVLLDAIESAGYKQPMPIQMQSIPIGLQGRDL 515
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IG+A TGSGKT FVLP+L++ +KLP + E GPY LI+ P+RELA Q
Sbjct: 516 IGLAETGSGKTCAFVLPMLVYI----SKLPPMTAENAADGPYALIMAPTRELALQIEQEA 571
Query: 241 QYYCAAL 247
+ +A+
Sbjct: 572 AKFASAM 578
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IG+A TGSGKT FVLP+L++ +KLP + E GPY LI+ P+RELA Q
Sbjct: 513 RDLIGLAETGSGKTCAFVLPMLVYI----SKLPPMTAENAADGPYALIMAPTRELALQIE 568
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +A+ RT +GG + + +++G +
Sbjct: 569 QEAAKFASAM--GFRTVAVVGGQSIEEQGFSLRRGAE 603
>gi|345319068|ref|XP_003430097.1| PREDICTED: ATP-dependent RNA helicase DDX42, partial
[Ornithorhynchus anatinus]
Length = 717
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P QV D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 197 PQQVIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 255
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 256 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHA 312
Query: 239 IIQYYCAALPIGS 251
+ + A + S
Sbjct: 313 ECKRFGKAYNLRS 325
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 257 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 313
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 314 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 346
>gi|241118310|ref|XP_002402175.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215493275|gb|EEC02916.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 332
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 122 VHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSG 181
V +I + ++ G +VP F P ++RA+E+ G + PTPIQVQG P ALSG
Sbjct: 78 VENIRKEKEITIISGANVPKPVTKFEYTSFPNYILRAIESVGFQAPTPIQVQGWPIALSG 137
Query: 182 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
RD+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+REL Q
Sbjct: 138 RDMIGIAETGSGKTLAFLLPAIVHINAQHL---LRPGDGPIVLVLAPTRELVEQ 188
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ-THDII 66
RD+IGIA TGSGKTL F+LP ++ Q PG+GP L++ P+REL Q +
Sbjct: 138 RDMIGIAETGSGKTLAFLLPAIVHINAQHL---LRPGDGPIVLVLAPTRELVEQIRQQCL 194
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q+ ++ +++ +A GGVP + ++KG++
Sbjct: 195 QFGSSS---KIKSSVAYGGVPKRPQIVELRKGVE 225
>gi|156375300|ref|XP_001630019.1| predicted protein [Nematostella vectensis]
gi|156217032|gb|EDO37956.1| predicted protein [Nematostella vectensis]
Length = 411
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
L D+V D IR I +EG+D P SF + LP L L K + PTPIQ+Q +
Sbjct: 14 LSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSC 73
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
+SGRDIIG+A TGSGKTL + LP+ C+ TK P PG+ P LI+ P+REL +Q
Sbjct: 74 VMSGRDIIGLAETGSGKTLAYSLPL---CMLLRTKAPSNPGDTPVALILTPTRELMQQ 128
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 19/100 (19%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH-- 63
+ RDIIG+A TGSGKTL + LP+ C+ TK P PG+ P LI+ P+REL +Q
Sbjct: 76 SGRDIIGLAETGSGKTLAYSLPL---CMLLRTKAPSNPGDTPVALILTPTRELMQQVFMN 132
Query: 64 -----DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D+I+ C P+ GGVP++ +++G
Sbjct: 133 VSEMLDVIR--CPGNPV-------CGGVPVSTQTIALREG 163
>gi|225437591|ref|XP_002277419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera]
gi|297743992|emb|CBI36962.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++L I V G DVP +F L+ A+ +G +KPTPIQ Q P LSGRDIIG
Sbjct: 209 RKSLSIRVSGFDVPRPIKTFEDCGFSPQLMNAITKQGYEKPTPIQCQAFPIVLSGRDIIG 268
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
IA TGSGKT FVLP+++ ++Q EGP G+I P+RELA Q +
Sbjct: 269 IAKTGSGKTAAFVLPMIVHIMDQPE---LAKEEGPIGVICAPTRELAHQIY 316
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT FVLP+++ ++Q EGP G+I P+RELA Q +
Sbjct: 262 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE---LAKEEGPIGVICAPTRELAHQIY-- 316
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P +R GG+ + +K G +
Sbjct: 317 LESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCE 351
>gi|147821303|emb|CAN74586.1| hypothetical protein VITISV_041989 [Vitis vinifera]
Length = 771
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++L I V G DVP +F L+ A+ +G +KPTPIQ Q P LSGRDIIG
Sbjct: 209 RKSLSIRVSGFDVPRPIKTFEDCGFSPQLMNAITKQGYEKPTPIQCQAFPIVLSGRDIIG 268
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
IA TGSGKT FVLP+++ ++Q EGP G+I P+RELA Q +
Sbjct: 269 IAKTGSGKTAAFVLPMIVHIMDQPE---LAKEEGPIGVICAPTRELAHQIY 316
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT FVLP+++ ++Q EGP G+I P+RELA Q +
Sbjct: 262 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE---LAKEEGPIGVICAPTRELAHQIY-- 316
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P +R GG+ + +K G +
Sbjct: 317 LESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCE 351
>gi|427781447|gb|JAA56175.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 681
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P D R+ I + G DVP +F LP+ + A+ PTPIQ QG P A
Sbjct: 64 PKHEVDAFRKQHDITIRGKDVPNPILTFEEANLPDFCMSAIRQAQYNTPTPIQAQGWPIA 123
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTH 237
LSGRD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 124 LSGRDMVGIAQTGSGKTLAYILPAILHISHQ----PYLERGDGPIALVVAPTRELAQQIQ 179
Query: 238 DIIQYYCAALPI 249
+ + A I
Sbjct: 180 QVASEFGRASRI 191
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 127 RDMVGIAQTGSGKTLAYILPAILHISHQ----PYLERGDGPIALVVAPTRELAQQIQQVA 182
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A I R GG P + +++G++
Sbjct: 183 SEFGRASRI--RNTCVFGGAPKGPQIRDLERGVE 214
>gi|343427053|emb|CBQ70581.1| related to RNA helicase [Sporisorium reilianum SRZ2]
Length = 1155
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRLMKLPESLVR 157
+ Y K + P I + +++ + IR + I V G D P + LP S +
Sbjct: 433 VDYEPFRKEFYNPPAEIQDMSEELANQIRLEMDAITVRGKDCPKPLTKWSHCGLPASCLD 492
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ G PTPIQ Q IPA +SGRDIIG+A TGSGKT+ F+LP+ +Q P
Sbjct: 493 VIKRLGYAAPTPIQSQAIPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQR---PVEV 549
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGP G+++ P+RELA Q + ++ + AL
Sbjct: 550 GEGPVGIVMTPTRELAVQIYREMRPFIKAL 579
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIG+A TGSGKT+ F+LP+ +Q P GEGP G+++ P+RELA Q +
Sbjct: 515 SGRDIIGVAKTGSGKTMAFLLPMFRHIKDQR---PVEVGEGPVGIVMTPTRELAVQIYRE 571
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKK 97
++ + AL LR GG P+++ + +KK
Sbjct: 572 MRPFIKAL--GLRAACVYGGAPISEQIAEMKK 601
>gi|224284362|gb|ACN39916.1| unknown [Picea sitchensis]
Length = 593
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ +L D R+ I VEG DVP SFR + ++R LE G +PT IQ Q
Sbjct: 140 AVAALSDHEVSAYRKRREITVEGRDVPKPLRSFREASFTDHVLRELERAGFSEPTAIQAQ 199
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L G+GP L++ P+REL
Sbjct: 200 GWPMALKGRDLIGIAETGSGKTLAYLLPAIVHINAQ----PHLAHGDGPIVLVLAPTREL 255
Query: 233 ARQ 235
A Q
Sbjct: 256 AVQ 258
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L G+GP L++ P+RELA Q
Sbjct: 208 RDLIGIAETGSGKTLAYLLPAIVHINAQ----PHLAHGDGPIVLVLAPTRELAVQIQQES 263
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I TC+ GG P + +++G++
Sbjct: 264 VKFGTSSKIK-STCI-YGGAPKGPQIRDLQRGVE 295
>gi|427779853|gb|JAA55378.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 686
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P D R+ I + G DVP +F LP+ + A+ PTPIQ QG P A
Sbjct: 69 PKHEVDAFRKQHDITIRGKDVPNPILTFEEANLPDFCMSAIRQAQYNTPTPIQAQGWPIA 128
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTH 237
LSGRD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 129 LSGRDMVGIAQTGSGKTLAYILPAILHISHQ----PYLERGDGPIALVVAPTRELAQQIQ 184
Query: 238 DIIQYYCAALPI 249
+ + A I
Sbjct: 185 QVASEFGRASRI 196
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 132 RDMVGIAQTGSGKTLAYILPAILHISHQ----PYLERGDGPIALVVAPTRELAQQIQQVA 187
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A I R GG P + +++G++
Sbjct: 188 SEFGRASRI--RNTCVFGGAPKGPQIRDLERGVE 219
>gi|222617918|gb|EEE54050.1| hypothetical protein OsJ_00740 [Oryza sativa Japonica Group]
Length = 468
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ + ++ + RR I VEG DVP FR + PE +++ + G +PTPIQ Q
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTREL 176
Query: 233 ARQ 235
A Q
Sbjct: 177 AVQ 179
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQ 179
>gi|156095474|ref|XP_001613772.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium vivax
Sal-1]
gi|148802646|gb|EDL44045.1| pre-mRNA splicing factor RNA helicase PRP28, putative [Plasmodium
vivax]
Length = 1006
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/125 (45%), Positives = 73/125 (58%), Gaps = 8/125 (6%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I ++G VPP + L L++A++ +KPTPIQ+Q IP
Sbjct: 555 MTDRDWRIFREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPI 614
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELA 233
AL RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA
Sbjct: 615 ALEMRDLIGIAETGSGKTAAFVLPMLAYV----KQLPPLTYETSQDGPYALIIAPSRELA 670
Query: 234 RQTHD 238
Q D
Sbjct: 671 IQIFD 675
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 64/133 (48%), Gaps = 29/133 (21%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA Q
Sbjct: 619 RDLIGIAETGSGKTAAFVLPMLAYV----KQLPPLTYETSQDGPYALIIAPSRELAIQIF 674
Query: 64 D---IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPD 120
D YC+ RT +GG ++KG++ I+ P
Sbjct: 675 DETNKFASYCSC-----RTVAVVGGRNAEAQAFELRKGVE-------------IIIGTPG 716
Query: 121 QVHDIIRRNLRIL 133
++HD + + +L
Sbjct: 717 RIHDCLEKAYTVL 729
>gi|340500096|gb|EGR26997.1| hypothetical protein IMG5_203370 [Ichthyophthirius multifiliis]
Length = 661
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
I SL + I+++ I V+G +P SF + E L+ + +G +KPTPIQ Q
Sbjct: 275 IQSLQQTQIEKIKKDFEIKVKGYCIPAPLVSFGYLGFDEQLINQISKQGFQKPTPIQSQA 334
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
+P ALSGRD++G+A TGSGKT+ +V P+L+ L+Q+ +GP GLI+ P+REL +
Sbjct: 335 LPCALSGRDVVGVAKTGSGKTVSYVWPLLIHILDQQ---ELEKNQGPIGLILAPTRELCQ 391
Query: 235 QTH 237
Q +
Sbjct: 392 QIY 394
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++G+A TGSGKT+ +V P+L+ L+Q+ +GP GLI+ P+REL +Q + +
Sbjct: 342 RDVVGVAKTGSGKTVSYVWPLLIHILDQQ---ELEKNQGPIGLILAPTRELCQQIYLECK 398
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y I + L GG ++ ++K G++
Sbjct: 399 KYAKIYNISVGALL--GGENKHEQWRMLKTGVE 429
>gi|334322878|ref|XP_003340311.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Monodelphis
domestica]
Length = 730
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 115 ILSL-PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
I SL P QV D+ R L + V G P SF E L+ + +PTPIQ Q
Sbjct: 224 ITSLTPQQVIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQ 282
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
G+P ALSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL
Sbjct: 283 GVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LDPGDGPIAVIVCPTRELC 339
Query: 234 RQTHDIIQYYCAALPIGS 251
+Q H + + A + S
Sbjct: 340 QQIHAECKRFGKAYNLRS 357
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H +
Sbjct: 291 RDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LDPGDGPIAVIVCPTRELCQQIHAECK 347
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A LR+ GG M + +++G +
Sbjct: 348 RFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 378
>gi|358332200|dbj|GAA50893.1| ATP-dependent RNA helicase DDX5/DBP2 [Clonorchis sinensis]
Length = 887
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R ++ + G ++P SF + LP+ ++R + + G PTPIQ QG+P LSGRD++
Sbjct: 356 FRTEYKMTLSGPNIPRPVLSFGELNLPDHVLRVIASNGWHGPTPIQAQGLPMGLSGRDVV 415
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
GIA TGSGKT F++P ++ L Q L GEGP L++ P+RELA+Q + Q +
Sbjct: 416 GIAQTGSGKTASFIIPAIVHILAQPR---LLRGEGPICLVLVPTRELAQQVLSVAQQFAT 472
Query: 246 A 246
A
Sbjct: 473 A 473
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKT F++P ++ L Q L GEGP L++ P+RELA+Q +
Sbjct: 410 SGRDVVGIAQTGSGKTASFIIPAIVHILAQPR---LLRGEGPICLVLVPTRELAQQVLSV 466
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
Q + A LRT GG L +++G
Sbjct: 467 AQQFATA--AGLRTMCFYGGASRGPQLRDLQRG 497
>gi|357130377|ref|XP_003566825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like
[Brachypodium distachyon]
Length = 1045
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/123 (42%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + V G DVP ++ L L+ ++ G +KP IQ Q +P +SGRD IG
Sbjct: 405 RKLLELKVRGKDVPKPIKTWIQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIG 464
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
+A TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q + I+ +
Sbjct: 465 VAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIYSDIKKFSKV 521
Query: 247 LPI 249
L I
Sbjct: 522 LGI 524
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IG+A TGSGKTL FVLP+L +Q P +PG+GP GLI+ P+REL Q +
Sbjct: 458 SGRDCIGVAKTGSGKTLAFVLPMLRHVKDQP---PVVPGDGPIGLIMAPTRELVVQIYSD 514
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + L I C+ I GG + Q + +K+G +
Sbjct: 515 IKKFSKVLGI---NCVPIYGGSGVAQQISELKRGAE 547
>gi|299117107|emb|CBN73878.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 467
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 5/122 (4%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ S + D RR++ I ++GD +P +F +PE ++R + +G KPTPIQ QG
Sbjct: 32 VTSRSQEEGDAWRRSVGITIQGDGIPKPVMTFEEASMPEYVLREVLKQGFPKPTPIQSQG 91
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELA 233
P AL GRD++GI+ TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA
Sbjct: 92 WPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQ----PYLEQGDGPIVLVVAPTRELA 147
Query: 234 RQ 235
Q
Sbjct: 148 VQ 149
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GI+ TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q +
Sbjct: 99 RDMVGISATGSGKTLAFLLPAMIHINAQ----PYLEQGDGPIVLVVAPTRELAVQIKEEC 154
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I TC+ GGVP + + +G++
Sbjct: 155 DKFGGSSDIK-NTCV-YGGVPKRSQVYDLSRGVE 186
>gi|392594865|gb|EIW84189.1| RNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 447
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ ++ D+ + RR I + G DVP SF + PE ++ + A+G PTPIQ Q
Sbjct: 75 VSAMSDREIEEFRRTKEIKIHGRDVPRPVTSFDELGFPEYILSTIRAQGFPNPTPIQCQA 134
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELA 233
P ALSGRD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA
Sbjct: 135 WPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRELA 190
Query: 234 RQTHDIIQYYCAAL 247
Q IQ C
Sbjct: 191 VQ----IQQECTKF 200
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 140 SGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRELAVQ--- 192
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C +R GG P + + +G++
Sbjct: 193 -IQQECTKFGSTSRIRNTAIYGGAPKGPQVRDLTRGVE 229
>gi|218187683|gb|EEC70110.1| hypothetical protein OsI_00766 [Oryza sativa Indica Group]
Length = 470
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ + ++ + RR I VEG DVP FR + PE +++ + G +PTPIQ Q
Sbjct: 63 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 122
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 123 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTREL 178
Query: 233 ARQ 235
A Q
Sbjct: 179 AVQ 181
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 131 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQ 181
>gi|170058665|ref|XP_001865019.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167877695|gb|EDS41078.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 686
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 3/138 (2%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K ++ I++L + + L I ++G D+P C +F LP+ ++ +G
Sbjct: 78 KNFYKPSEQIMALSETDFNAYLAKLEITLKGRDIPRPCITFGDCGLPDYILEETVKQGFT 137
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLI 225
KPT IQ QG+P A++GRD++GIA TGSGKTL +V P L+ QET G+GP LI
Sbjct: 138 KPTAIQAQGMPIAMTGRDMVGIAQTGSGKTLAYVAPALVHIQHQET---VHRGDGPIALI 194
Query: 226 ICPSRELARQTHDIIQYY 243
+ P+RELA+Q + +
Sbjct: 195 LAPTRELAQQIQQVANDF 212
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL +V P L+ QET G+GP LI+ P+RELA+Q +
Sbjct: 154 RDMVGIAQTGSGKTLAYVAPALVHIQHQET---VHRGDGPIALILAPTRELAQQIQQVAN 210
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ TC+ GG P + +++G +
Sbjct: 211 DFGQRTNTN-NTCV-FGGAPKGPQIRDLERGAE 241
>gi|56201870|dbj|BAD73320.1| putative ethylene-responsive RNA helicase [Oryza sativa Japonica
Group]
Length = 521
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ + ++ + RR I VEG DVP FR + PE +++ + G +PTPIQ Q
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTREL 176
Query: 233 ARQ 235
A Q
Sbjct: 177 AVQ 179
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQ 179
>gi|255578793|ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1173
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP ++ L ++ ++ +KP PIQ Q +P +SGRD IG
Sbjct: 510 RKQLELKIHGKDVPKPVKTWHQTGLASKILETIKKLNYEKPMPIQAQALPIIMSGRDCIG 569
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL FVLP+L +Q P + G+GP GLI+ P+REL +Q H I+ +
Sbjct: 570 IAKTGSGKTLAFVLPMLRHIKDQ----PLVEAGDGPIGLIMAPTRELVQQIHSDIKKFAK 625
Query: 246 ALPI 249
L I
Sbjct: 626 VLGI 629
Score = 70.1 bits (170), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD IGIA TGSGKTL FVLP+L +Q P + G+GP GLI+ P+REL +Q H
Sbjct: 563 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQ----PLVEAGDGPIGLIMAPTRELVQQIHS 618
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + L I R GG + Q + +K+G +
Sbjct: 619 DIKKFAKVLGI--RCVPVYGGSGVAQQISELKRGTE 652
>gi|449458179|ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
gi|449476660|ref|XP_004154799.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
Length = 505
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ ++ + R+ I VEG DVP SFR + P+ +++ + G +PTPIQ Q
Sbjct: 69 SVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQ 128
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 129 GWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILSPGDGPIVLVLAPTREL 184
Query: 233 ARQTHDIIQYYCAALPI 249
A Q + A+ I
Sbjct: 185 AVQIQQEATKFGASSKI 201
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 137 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILSPGDGPIVLVLAPTRELAVQIQQEA 192
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 193 TKFGASSKIK-NTCV-YGGVPKGPQVRDLQKGVE 224
>gi|221481559|gb|EEE19941.1| DEAD-box helicase family protein [Toxoplasma gondii GT1]
Length = 1158
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 10/126 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G VPP ++ LP L+ A++ +PTPIQ+Q IP AL RD+
Sbjct: 718 IFREDFEIYIKGGRVPPPIRTWAESALPWELIEAVKHANYDRPTPIQMQAIPIALEQRDL 777
Query: 185 IGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
IGIA TGSGKT FVLP+L + L ++T +GPY LI+ PSRELA Q +
Sbjct: 778 IGIAETGSGKTAAFVLPMLTYVKGLPPLNEDTG-----QDGPYALILAPSRELALQIDEE 832
Query: 240 IQYYCA 245
Q + +
Sbjct: 833 TQKFAS 838
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQT 62
RD+IGIA TGSGKT FVLP+L + L ++T +GPY LI+ PSRELA Q
Sbjct: 775 RDLIGIAETGSGKTAAFVLPMLTYVKGLPPLNEDTG-----QDGPYALILAPSRELALQI 829
Query: 63 HDIIQYYCA 71
+ Q + +
Sbjct: 830 DEETQKFAS 838
>gi|237843843|ref|XP_002371219.1| DEAD-box ATP-dependent RNA helicase, putative [Toxoplasma gondii
ME49]
gi|211968883|gb|EEB04079.1| DEAD-box ATP-dependent RNA helicase, putative [Toxoplasma gondii
ME49]
Length = 1158
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 10/126 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G VPP ++ LP L+ A++ +PTPIQ+Q IP AL RD+
Sbjct: 718 IFREDFEIYIKGGRVPPPIRTWAESALPWELIEAVKHANYDRPTPIQMQAIPIALEQRDL 777
Query: 185 IGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
IGIA TGSGKT FVLP+L + L ++T +GPY LI+ PSRELA Q +
Sbjct: 778 IGIAETGSGKTAAFVLPMLTYVKGLPPLNEDTG-----QDGPYALILAPSRELALQIDEE 832
Query: 240 IQYYCA 245
Q + +
Sbjct: 833 TQKFAS 838
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 10/69 (14%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQT 62
RD+IGIA TGSGKT FVLP+L + L ++T +GPY LI+ PSRELA Q
Sbjct: 775 RDLIGIAETGSGKTAAFVLPMLTYVKGLPPLNEDTG-----QDGPYALILAPSRELALQI 829
Query: 63 HDIIQYYCA 71
+ Q + +
Sbjct: 830 DEETQKFAS 838
>gi|224002607|ref|XP_002290975.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972751|gb|EED91082.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 681
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R L + V G P +FR L E + LE+K + P P+Q Q +P ++GRD+IG
Sbjct: 43 RAKLGVKVRGKGAPSPVSTFREAGLSERINAVLESKNMVNPFPVQAQCLPCIMAGRDVIG 102
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE-GPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL FVLP+L L+Q P PGE GP GLI+ P+RELA Q H + + +
Sbjct: 103 IAKTGSGKTLAFVLPMLRHILDQP---PLAPGETGPIGLILAPARELAYQIHVVCKGFTK 159
Query: 246 ALPIGS 251
L + S
Sbjct: 160 HLGLKS 165
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE-GPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL FVLP+L L+Q P PGE GP GLI+ P+RELA Q H +
Sbjct: 98 RDVIGIAKTGSGKTLAFVLPMLRHILDQP---PLAPGETGPIGLILAPARELAYQIHVVC 154
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L L++ GG + + + +K+G
Sbjct: 155 KGFTKHL--GLKSTAVYGGAGVAEQIGDLKRGTH 186
>gi|3435312|gb|AAC32396.1| RNA helicase-related protein [Homo sapiens]
Length = 709
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P Q+ D+ R L + V G P SF E L+ + +PTPIQ QG+P A
Sbjct: 110 PQQLIDL-RHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVA 168
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
LSGRD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 169 LSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQK---ELEPGDGPIAVIVCPTRELCQQIH 224
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H +
Sbjct: 172 RDMIGIAKTGSGKTAAFIWPMLIHIMDQK---ELEPGDGPIAVIVCPTRELCQQIHAECK 228
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A LR+ GG M + +++G +
Sbjct: 229 RFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 259
>gi|409049919|gb|EKM59396.1| hypothetical protein PHACADRAFT_249858 [Phanerochaete carnosa
HHB-10118-sp]
Length = 851
Score = 97.8 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I Y K + AP + ++ D+ D++R L I + G D P + LP S +
Sbjct: 147 INYEPFRKEFYIAPPDVAAMTDEEADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCLD 206
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ G PTPIQ Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +Q P
Sbjct: 207 VIKKLGYAGPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEQ 263
Query: 218 GEGPYGLIICPSRELARQTH 237
EGP +++ P+RELA Q H
Sbjct: 264 MEGPVAVVMTPTRELAVQIH 283
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P EGP +++ P+RELA Q H
Sbjct: 229 SGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEQMEGPVAVVMTPTRELAVQIHRE 285
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 286 CKPFLRVL--NLRAVCAYGGSPIKDQIAEMKKGAE 318
>gi|118359808|ref|XP_001013142.1| CLN3 protein [Tetrahymena thermophila]
gi|89294909|gb|EAR92897.1| CLN3 protein [Tetrahymena thermophila SB210]
Length = 1138
Score = 97.8 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K ++ I L +Q + IR+ I V G P SF + E L+R
Sbjct: 17 IKYEAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEELMRQ 76
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ G +KPT IQ Q +P LSGRDI+G+A TGSGKT+ ++ P+L+ L+Q
Sbjct: 77 ITKLGFEKPTQIQCQALPCGLSGRDIVGVAKTGSGKTVSYLWPLLIHILDQRE---LEKN 133
Query: 219 EGPYGLIICPSRELARQTH 237
EGP GLI+ P+REL +Q +
Sbjct: 134 EGPIGLILAPTRELCQQVY 152
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDI+G+A TGSGKT+ ++ P+L+ L+Q EGP GLI+ P+REL +Q +
Sbjct: 98 SGRDIVGVAKTGSGKTVSYLWPLLIHILDQRE---LEKNEGPIGLILAPTRELCQQVYTE 154
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y I + L GG ++ ++K G++
Sbjct: 155 SKRYAKIYNISVGALL--GGENKHEQWKMLKAGVE 187
>gi|302854279|ref|XP_002958649.1| hypothetical protein VOLCADRAFT_69703 [Volvox carteri f.
nagariensis]
gi|300256038|gb|EFJ40315.1| hypothetical protein VOLCADRAFT_69703 [Volvox carteri f.
nagariensis]
Length = 582
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Query: 108 SWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACC----SFRLMKLPESLVRALEAKG 163
+W+ + +L D+ IR+ L++ V+ + P SF+ M L +++ +
Sbjct: 95 NWQPTSRVQALSDENIQEIRQRLKVTVDVTEGEPKAAPPIESFQEMNLHPNILADIAHHK 154
Query: 164 IKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYG 223
+ PTPIQ QG+P ALSGRDI+G A TGSGKT F +P++ CL Q P PG+GP
Sbjct: 155 YETPTPIQAQGLPIALSGRDILGCAETGSGKTASFSIPMIQHCLNQP---PLRPGDGPMA 211
Query: 224 LIICPSRELARQTHDIIQYYC 244
L++ P+RELA+Q ++ +
Sbjct: 212 LVLAPTRELAQQIEREVRAFS 232
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDI+G A TGSGKT F +P++ CL Q P PG+GP L++ P+RELA+Q
Sbjct: 171 SGRDILGCAETGSGKTASFSIPMIQHCLNQP---PLRPGDGPMALVLAPTRELAQQIERE 227
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + + +RT + +GGVPM + ++ G++
Sbjct: 228 VRAFSRSSSRNVRTSIVVGGVPMQEQRHDLRNGVE 262
>gi|350590222|ref|XP_003131337.3| PREDICTED: ATP-dependent RNA helicase DDX42 [Sus scrofa]
Length = 906
Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 134 VEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSG 193
V G P SF E L+ + +PTPIQ QG+P ALSGRD+IGIA TGSG
Sbjct: 208 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSG 267
Query: 194 KTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
KT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 268 KTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIH 308
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP +I+CP+REL +Q H
Sbjct: 254 SGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKE---LEPGDGPIAVIVCPTRELCQQIHAE 310
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 311 CKRFGKAY--NLRSVAVYGGGSMWEQAKALQEGAE 343
>gi|303278630|ref|XP_003058608.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459768|gb|EEH57063.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 471
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVE---GDDVPPACCSFRLMKLPESLVRALEAKGIK 165
W+ + +L + IRR + + VE GD+ P SF M L ++ +
Sbjct: 8 WKPSERVQALTVNQIEEIRRRMDVTVECKEGDEAAPPVESFEDMMLNAKILLDIRFHEYD 67
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLI 225
KPTPIQ Q IP LSGRD++G A TGSGKT F +P++ CLEQ+ P G+GP+ ++
Sbjct: 68 KPTPIQAQAIPIILSGRDVLGCAETGSGKTAAFSIPMIQHCLEQD---PIKRGDGPFAIV 124
Query: 226 ICPSRELARQ 235
+ P+RELA+Q
Sbjct: 125 MAPTRELAQQ 134
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++G A TGSGKT F +P++ CLEQ+ P G+GP+ +++ P+RELA+Q
Sbjct: 82 SGRDVLGCAETGSGKTAAFSIPMIQHCLEQD---PIKRGDGPFAIVMAPTRELAQQIEKE 138
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + +T + +GG M+ +++G++
Sbjct: 139 AKVFSRSSK-GFKTTIVVGGTNMSDQRSDLRQGVE 172
>gi|224083374|ref|XP_002307002.1| predicted protein [Populus trichocarpa]
gi|222856451|gb|EEE93998.1| predicted protein [Populus trichocarpa]
Length = 895
Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/123 (42%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + + G DVP ++ L ++ ++ +KP IQ Q +P +SGRD IG
Sbjct: 238 RKLLELKIHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKPMTIQAQALPIIMSGRDCIG 297
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL FVLP+L +Q P GEGP GLI+ P+REL +Q H I+ + A
Sbjct: 298 IAKTGSGKTLAFVLPMLRHIKDQP---PVEAGEGPIGLIMAPTRELVQQIHSDIRKFTKA 354
Query: 247 LPI 249
L I
Sbjct: 355 LGI 357
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL FVLP+L +Q P GEGP GLI+ P+REL +Q H
Sbjct: 291 SGRDCIGIAKTGSGKTLAFVLPMLRHIKDQP---PVEAGEGPIGLIMAPTRELVQQIHSD 347
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + AL I R GG + Q + +K+G +
Sbjct: 348 IRKFTKALGI--RCVPVYGGSGVAQQISELKRGTE 380
>gi|68074371|ref|XP_679100.1| snrnp protein [Plasmodium berghei strain ANKA]
gi|56499760|emb|CAH95922.1| snrnp protein, putative [Plasmodium berghei]
Length = 782
Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I ++G VPP + L L++A++ +KPTPIQ+Q IP
Sbjct: 332 MTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPI 391
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELA 233
AL RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA
Sbjct: 392 ALEMRDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALIIAPSRELA 447
Query: 234 RQTHD 238
Q ++
Sbjct: 448 IQIYE 452
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA Q +
Sbjct: 396 RDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALIIAPSRELAIQIY 451
Query: 64 D---IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ YC+ RT +GG +++G++
Sbjct: 452 EETNKFASYCSC-----RTVAVVGGRNAEAQAFELRRGVE 486
>gi|328771122|gb|EGF81162.1| hypothetical protein BATDEDRAFT_10391 [Batrachochytrium
dendrobatidis JAM81]
Length = 521
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
+ Y D K + + I L D IR+ L + V G VP C SF ESL+
Sbjct: 22 MDYPDFSKNFYTEHQDISQLSDTQVQTIRQQLDMRVFGKHVPRPCISFAHFGFDESLLNC 81
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP- 217
+ G +PT IQ Q +P ALSG D+IGIA TGSGKT F+ P+L+ ++Q P L
Sbjct: 82 IIKHGYTEPTGIQRQAVPVALSGHDLIGIAQTGSGKTAAFLWPMLVHLMDQ----PELER 137
Query: 218 GEGPYGLIICPSRELARQ 235
G+GP GL++ P+RELA Q
Sbjct: 138 GDGPIGLVLAPTRELAHQ 155
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ D+IGIA TGSGKT F+ P+L+ ++Q P L G+GP GL++ P+RELA Q +
Sbjct: 103 SGHDLIGIAQTGSGKTAAFLWPMLVHLMDQ----PELERGDGPIGLVLAPTRELAHQIYL 158
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A +R + GGV N ++ G++
Sbjct: 159 EAKKFSKAYQ-GVRVTVLYGGVSKNDQFKELRAGVE 193
>gi|170099095|ref|XP_001880766.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644291|gb|EDR08541.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 498
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 113 RCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + +L D+ + RR I V+G +VP SF + PE L+ ++ A+G PTPIQ
Sbjct: 30 KRVAALSDREIEEFRRIKEIKVQGRNVPRPVVSFDQVGFPEYLMSSIRAQGFDAPTPIQC 89
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRE 231
Q P AL+GRD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RE
Sbjct: 90 QAWPMALTGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALVLAPTRE 145
Query: 232 LARQTHDIIQYYCAALPIGS 251
LA Q IQ C S
Sbjct: 146 LAVQ----IQQECTKFGSNS 161
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 99 RDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALVLAPTRELAVQ----I 150
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C +R GG P + +++G++
Sbjct: 151 QQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVE 186
>gi|357613478|gb|EHJ68531.1| hypothetical protein KGM_00706 [Danaus plexippus]
Length = 757
Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/133 (39%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
IQY +P + ++ P + +Q H + +++NL + + G D P SF + E L+
Sbjct: 214 IQY-EPFEKNFYTPHEDIEKLEQ-HQVEELKKNLGVKISGPDPPKPVSSFGHLGFDEQLM 271
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+A+ +PTP+Q GIPAALSGRD+IGIA TGSGKT F+ P+L+ ++Q+
Sbjct: 272 KAIRKSEYTQPTPVQAAGIPAALSGRDLIGIARTGSGKTAAFLWPLLVHIMDQKE---LA 328
Query: 217 PGEGPYGLIICPS 229
PG+GP GLI+ P+
Sbjct: 329 PGDGPIGLILAPT 341
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 3/50 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPS 55
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ PG+GP GLI+ P+
Sbjct: 295 SGRDLIGIARTGSGKTAAFLWPLLVHIMDQKE---LAPGDGPIGLILAPT 341
>gi|145475849|ref|XP_001423947.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391009|emb|CAK56549.1| unnamed protein product [Paramecium tetraurelia]
Length = 737
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
IQY + ++ I +L + I+R +I V+G++VP SF ++L + LV
Sbjct: 143 IQYEEFESNFYQEHEEIANLNVAQVEKIKREYQIHVKGNNVPKPIISFGHLQLDQKLVNK 202
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ A+ +KPT IQ Q +P LSGR++IG+A TGSGKT+ +V P+L+ Q
Sbjct: 203 IVAQNFEKPTAIQSQALPCVLSGRNVIGVAKTGSGKTIAYVWPMLVHVSAQRA---VEKK 259
Query: 219 EGPYGLIICPSRELARQTHDIIQYYCAALPIG 250
EGP GL++ P+REL +Q + + Y I
Sbjct: 260 EGPIGLVVVPTRELGQQVYLETKKYAQLFQIS 291
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
R++IG+A TGSGKT+ +V P+L+ Q EGP GL++ P+REL +Q + +
Sbjct: 226 RNVIGVAKTGSGKTIAYVWPMLVHVSAQRA---VEKKEGPIGLVVVPTRELGQQVYLETK 282
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGI 99
Y I + L GG + ++ G+
Sbjct: 283 KYAQLFQISVSALL--GGENKHHQWKELRAGV 312
>gi|224134991|ref|XP_002327540.1| predicted protein [Populus trichocarpa]
gi|222836094|gb|EEE74515.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 124 DIIRRNLR--ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSG 181
D+ LR I VEG DVP SF + P+ +++ + G +PTPIQ QG P AL G
Sbjct: 69 DVEEYRLRREITVEGRDVPKPVKSFHDVGFPDYVLQEISKAGFTEPTPIQAQGWPMALKG 128
Query: 182 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 240
RD+IGIA TGSGKTL ++LP ++ Q PFL PG+GP L++ P+RELA Q
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIIHVNAQ----PFLAPGDGPIVLVLAPTRELAVQIQQEA 184
Query: 241 QYYCAALPI 249
+ A+ I
Sbjct: 185 AKFGASSRI 193
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q PFL PG+GP L++ P+RELA Q
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIIHVNAQ----PFLAPGDGPIVLVLAPTRELAVQIQQEA 184
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 185 AKFGASSRIK-NTCI-YGGVPKGPQVRDLQKGVE 216
>gi|406601713|emb|CCH46674.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 588
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 79/128 (61%), Gaps = 8/128 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I++ + I+++G ++P ++R K+P L+ + G K+PTPIQ IP +LS +DI
Sbjct: 166 ILKEDYEIIIKGSNLPNPLRNWRESKIPLELLDIIHKLGYKEPTPIQRASIPISLSKKDI 225
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLP----FLPGEGPYGLIICPSRELARQTHDII 240
IGIA TGSGKTL +++P+L L KLP F +GPYGLI+ P+RELA+Q
Sbjct: 226 IGIAETGSGKTLAYLIPMLSKLL----KLPRLNEFSKADGPYGLILVPTRELAQQIEIEF 281
Query: 241 QYYCAALP 248
+ + LP
Sbjct: 282 KKFSKFLP 289
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLP----FLPGEGPYGLIICPSRELARQTH 63
+DIIGIA TGSGKTL +++P+L L KLP F +GPYGLI+ P+RELA+Q
Sbjct: 223 KDIIGIAETGSGKTLAYLIPMLSKLL----KLPRLNEFSKADGPYGLILVPTRELAQQIE 278
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + LP L G + LD+ K I+
Sbjct: 279 IEFKKFSKFLPSIDIISLVGGKLIEKNILDLQNKTIE 315
>gi|150863984|ref|XP_001382645.2| pre-mRNA processing RNA-helicase [Scheffersomyces stipitis CBS
6054]
gi|158514823|sp|A3LQ55.2|PRP5_PICST RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|149385240|gb|ABN64616.2| pre-mRNA processing RNA-helicase [Scheffersomyces stipitis CBS
6054]
Length = 875
Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats.
Identities = 65/152 (42%), Positives = 85/152 (55%), Gaps = 7/152 (4%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
+ Y+D K ++ P I + + + IR L I V G +VP + + LP S +
Sbjct: 226 MNYSDFRKNFYQEPSEIQNWTAEQVESIRLELDGIKVAGSNVPRPVLKWSHLGLPASYMN 285
Query: 158 ALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+E K K PT IQ Q +PA +SGRDIIG+A TGSGKTL FVLP+L +Q P L
Sbjct: 286 IIEDKLEYKAPTSIQSQALPAIMSGRDIIGVAKTGSGKTLSFVLPMLRHIQDQ----PDL 341
Query: 217 P-GEGPYGLIICPSRELARQTHDIIQYYCAAL 247
GEGP GLI+ P+RELA Q H I + L
Sbjct: 342 KDGEGPIGLILSPTRELAVQIHKEITNFTKRL 373
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RDIIG+A TGSGKTL FVLP+L +Q P L GEGP GLI+ P+RELA Q H
Sbjct: 309 SGRDIIGVAKTGSGKTLSFVLPMLRHIQDQ----PDLKDGEGPIGLILSPTRELAVQIHK 364
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + L + C GG P+ + +KKG Q
Sbjct: 365 EITNFTKRL--GMTACCCYGGSPIESQIAELKKGAQ 398
>gi|340373969|ref|XP_003385512.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Amphimedon queenslandica]
Length = 648
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
Query: 128 RNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGI 187
R+ + V+G ++P C F PE + ++ +G +PTPIQ QG ALSG D++GI
Sbjct: 112 RSRNMFVKGQNIPKPCLKFEEANFPEYMYDVMKRQGFVEPTPIQAQGWSMALSGSDVVGI 171
Query: 188 AFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
A TGSGKTL + LP L+ +E + +L GEGP L++ P+RELA Q +++Q Y +
Sbjct: 172 AQTGSGKTLAYSLPGLIH-IENQPRLQ--KGEGPIVLVLAPTRELAIQVQNVVQEYSKVV 228
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 68
D++GIA TGSGKTL + LP L+ +E + +L GEGP L++ P+RELA Q +++Q
Sbjct: 167 DVVGIAQTGSGKTLAYSLPGLIH-IENQPRLQ--KGEGPIVLVLAPTRELAIQVQNVVQE 223
Query: 69 YCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQY 101
Y + LRTC GG P L I G +
Sbjct: 224 YSKV--VGLRTCCVYGGAPKVPQLREISSGCHF 254
>gi|170053024|ref|XP_001862487.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
gi|167873709|gb|EDS37092.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
Length = 935
Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
D+V + R N+++ V G+ VP +F PE ++ + +G PT IQ QG P AL
Sbjct: 230 DEVQ-LFRENMQVTVMGNTVPHPTQTFDEGNFPEFVINEINKQGFPSPTAIQAQGWPIAL 288
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
SGRD++GIA TGSGKTL ++LP ++ Q+ P G+GP L++ P+RELA+Q +
Sbjct: 289 SGRDMVGIAQTGSGKTLAYMLPAIVHIAHQK---PLQRGDGPIVLVLAPTRELAQQIQTV 345
Query: 240 IQ 241
++
Sbjct: 346 VR 347
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q+ P G+GP L++ P+RELA+Q +
Sbjct: 289 SGRDMVGIAQTGSGKTLAYMLPAIVHIAHQK---PLQRGDGPIVLVLAPTRELAQQIQTV 345
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + +R GG + +++G++
Sbjct: 346 VRDFGTHSKPNIRYTCIFGGALKGPQVRDLERGVE 380
>gi|156835836|ref|XP_001642179.1| hypothetical protein Kpol_165p1 [Vanderwaltozyma polyspora DSM
70294]
gi|160380610|sp|A7TTT5.1|DBP2_VANPO RecName: Full=ATP-dependent RNA helicase DBP2
gi|156112620|gb|EDO14321.1| hypothetical protein Kpol_165p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 441
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K ++ + + DQ + RR + + G D+P SF P+ ++ ++A+G +
Sbjct: 75 KNFYQEAESVKARSDQEINEFRREHEMTITGHDIPKPITSFDEAGFPDYVLEEVKAEGFE 134
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
KPT IQ QG P ALSGRD+IG+A TGSGKTL + LP ++ Q P L PG+GP L
Sbjct: 135 KPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQ----PLLSPGDGPIVL 190
Query: 225 IICPSRELARQTHDIIQYYCAALPIGS 251
++ P+RELA Q IQ C+ S
Sbjct: 191 VLAPTRELAVQ----IQKECSKFGSSS 213
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IG+A TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 151 RDMIGVAATGSGKTLSYCLPGIVHINAQ----PLLSPGDGPIVLVLAPTRELAVQ----I 202
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C+ +R GGVP Q + + +G +
Sbjct: 203 QKECSKFGSSSRIRNSCVYGGVPRGQQIRELSRGAE 238
>gi|340521284|gb|EGR51519.1| predicted protein [Trichoderma reesei QM6a]
Length = 1247
Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query: 104 PIKTS-WRAPRCILSLPD-QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
PI+ + W P + +L + +V D+ I V G DVP + L + + +
Sbjct: 576 PIRKNFWVEPAELSNLSEAEVADLRMELDGIKVNGKDVPKPVQKWSQCGLTRQTLDVISS 635
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
G KPTPIQ+Q +PA +SGRD++G+A TGSGKT+ F+LP+ +QE P +GP
Sbjct: 636 LGFDKPTPIQMQALPALMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQE---PLKDTDGP 692
Query: 222 YGLIICPSRELARQTH 237
GLI+ P+RELA Q H
Sbjct: 693 IGLIMTPTRELATQIH 708
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++G+A TGSGKT+ F+LP+ +QE P +GP GLI+ P+RELA Q H
Sbjct: 654 SGRDVVGVAKTGSGKTMAFLLPMFRHIKDQE---PLKDTDGPIGLIMTPTRELATQIHRD 710
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + LR A GG P+ + + +K+G +
Sbjct: 711 CKPFLKMM--NLRAVCAYGGAPIREQIAELKRGAE 743
>gi|302798402|ref|XP_002980961.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
gi|300151500|gb|EFJ18146.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
Length = 653
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
+QY K + I L ++ R+++ + G DVP F+ + L L+ A
Sbjct: 138 LQYAPFDKDFYEEDASISGLSEEDVTSYRQSIGVRTSGFDVPRPVKQFKELGLDSLLMGA 197
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +G + PTPIQ Q +P LSGRDIIGIA TGSGKT FVLP+++ ++QE G
Sbjct: 198 ITKQGYENPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQE---ELGKG 254
Query: 219 EGPYGLIICPSRELARQ 235
EGP G+I P+RELA+Q
Sbjct: 255 EGPIGVICAPTRELAQQ 271
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT FVLP+++ ++QE GEGP G+I P+RELA+Q +
Sbjct: 219 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQE---ELGKGEGPIGVICAPTRELAQQIFNE 275
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + A P +R GG+ +K G
Sbjct: 276 SRKF--AKPYGIRVSGVFGGMSKLDQFKELKAG 306
>gi|356522500|ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
max]
Length = 507
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ D + R+ I VEG D+P SF PE ++ + G +PTPIQ Q
Sbjct: 71 AVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKAGFTEPTPIQSQ 130
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 131 GWPMALKGRDLIGIAETGSGKTLAYLLPSIVHVNAQ----PILNPGDGPIVLVLAPTREL 186
Query: 233 ARQTHDIIQYYCAALPIGS 251
A Q + A+ I S
Sbjct: 187 AVQIQQEATKFGASSRIKS 205
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 139 RDLIGIAETGSGKTLAYLLPSIVHVNAQ----PILNPGDGPIVLVLAPTRELAVQIQQEA 194
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 195 TKFGASSRIK-STCI-YGGVPKGPQVRDLQKGVE 226
>gi|219110339|ref|XP_002176921.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411456|gb|EEC51384.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 529
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ + DQ D R + +I+V G DVP +F +PE ++ + G KPTPIQ QG
Sbjct: 101 VRARSDQEADAWRASKQIVVRGHDVPKPVMTFDEASMPEYVLNEVLKCGFDKPTPIQSQG 160
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELA 233
P AL GR+++G++ TGSGKTL F+LP ++ Q P+L PG+GP L++ P+RELA
Sbjct: 161 WPMALKGRNMVGVSATGSGKTLAFLLPAMIHINAQ----PYLKPGDGPIVLVLAPTRELA 216
Query: 234 RQ 235
Q
Sbjct: 217 VQ 218
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
R+++G++ TGSGKTL F+LP ++ Q P+L PG+GP L++ P+RELA Q +
Sbjct: 168 RNMVGVSATGSGKTLAFLLPAMIHINAQ----PYLKPGDGPIVLVLAPTRELAVQIKEEC 223
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ I + + GGV + L ++ G +
Sbjct: 224 DKFGSSSEI--KNTVVYGGVKKHTQLRELRAGAE 255
>gi|407927140|gb|EKG20043.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 462
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 5/121 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ +I V+G DVP +F P ++ ++A+G +KPT IQ QG P ALSGRD
Sbjct: 41 DEYRKAHQIAVQGRDVPKPVTTFDEAGFPSYVMNEVKAQGFEKPTAIQAQGWPMALSGRD 100
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 101 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQAEISK 156
Query: 243 Y 243
+
Sbjct: 157 F 157
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 97 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQA 152
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 153 EISKFGKSSRI--RNTCVYGGVPKGGQIRDLARGVE 186
>gi|124506289|ref|XP_001351742.1| snrnp protein, putative [Plasmodium falciparum 3D7]
gi|23504671|emb|CAD51549.1| snrnp protein, putative [Plasmodium falciparum 3D7]
Length = 1123
Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats.
Identities = 55/125 (44%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I ++G VPP + L L++A++ +KPTPIQ+Q IP
Sbjct: 672 MTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPI 731
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELA 233
AL RD+IGIA TGSGKT FVLP+L + +LP L E GPY L+I PSRELA
Sbjct: 732 ALEMRDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALVIAPSRELA 787
Query: 234 RQTHD 238
Q ++
Sbjct: 788 IQIYE 792
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 23/138 (16%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + +LP L E GPY L+I PSRELA Q +
Sbjct: 736 RDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALVIAPSRELAIQIY 791
Query: 64 D---IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPD 120
+ YC+ RT +GG +++G++ I T R C+ +
Sbjct: 792 EETNKFASYCSC-----RTVAVVGGRNAEAQAFELRRGVEI--VIGTPGRLQDCL----E 840
Query: 121 QVHDIIRR-NLRILVEGD 137
+ + ++ + N IL E D
Sbjct: 841 KAYTVLNQCNYVILDEAD 858
>gi|294901517|ref|XP_002777393.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239885024|gb|EER09209.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 515
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 79/126 (62%), Gaps = 6/126 (4%)
Query: 115 ILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ S+ D +R++ +I +V G VP +F P+ ++ ++ G +KP+PIQVQ
Sbjct: 87 VASMSQDEVDKVRKDRQITVVHGKGVPKPIVTFEQAGFPDYILHEIKQAGFEKPSPIQVQ 146
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSREL 232
G P A+SGRD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+REL
Sbjct: 147 GWPVAMSGRDMVGIAETGSGKTLAFLLPAIVHINAQ----PYLQRGDGPIVLVLAPTREL 202
Query: 233 ARQTHD 238
A QT +
Sbjct: 203 AVQTQE 208
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA QT +
Sbjct: 153 SGRDMVGIAETGSGKTLAFLLPAIVHINAQ----PYLQRGDGPIVLVLAPTRELAVQTQE 208
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GG P + G++
Sbjct: 209 ECNRFGRSSRI--RNTCVYGGTPRGPQARALANGVE 242
>gi|409078207|gb|EKM78570.1| hypothetical protein AGABI1DRAFT_100622 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 494
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 113 RCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + D+ + RR I V+G +VP SF P+ L+ ++ A+G PTPIQ
Sbjct: 30 KKVSARSDREIEEFRRTKEIKVQGRNVPRPISSFEEAGFPQYLMTSIRAQGFSSPTPIQC 89
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRE 231
Q P ALSGRD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RE
Sbjct: 90 QAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRE 145
Query: 232 LARQTHDIIQYYCAALPIGS 251
LA Q IQ C S
Sbjct: 146 LAVQ----IQQECTKFGSNS 161
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 97 SGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRELAVQ--- 149
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C +R GG P + +++G++
Sbjct: 150 -IQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVE 186
>gi|336383448|gb|EGO24597.1| hypothetical protein SERLADRAFT_449372 [Serpula lacrymans var.
lacrymans S7.9]
Length = 487
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 89 NQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRL 148
+Q L+ +K Y + + S R+ R I D RR+ I V+G VP SF
Sbjct: 15 SQKLERFEKNF-YVEDKRVSSRSERDI--------DEFRRSKEIKVQGRGVPRPVSSFDE 65
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
PE ++ ++ A+G PTPIQ Q P ALSGRD++ IA TGSGKT+ F LP ++
Sbjct: 66 AGFPEYIMSSILAQGFSSPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINA 125
Query: 209 QETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
Q P L PG+GP L++ P+RELA Q IQ C S
Sbjct: 126 Q----PLLAPGDGPIALVLAPTRELAVQ----IQQECTKFGSSS 161
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 97 SGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALVLAPTRELAVQ--- 149
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C +R GG P + +++G++
Sbjct: 150 -IQQECTKFGSSSRIRNTAIYGGAPKGPQIRDLQRGVE 186
>gi|255548421|ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]
Length = 791
Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++L I V G DVP SF L+ A+ +G +KPT IQ Q +P LSGRDIIG
Sbjct: 207 RKSLAIRVSGFDVPRPIKSFEDCSFSMQLMNAIVKQGYEKPTSIQCQALPVVLSGRDIIG 266
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 237
IA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 267 IAKTGSGKTAAFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRELAHQIY 314
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 63
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 260 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRELAHQIY 314
>gi|443895251|dbj|GAC72597.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 1151
Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/151 (37%), Positives = 81/151 (53%), Gaps = 4/151 (2%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRLMKLPESLV 156
+ Y K + P I + +++ + IR + I V G D P + LP S +
Sbjct: 430 AVDYEPFRKVFYHPPAEIDDMSEELANQIRLEMDAITVRGKDCPKPLTKWSHCGLPASCL 489
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
++ G PTPIQ Q IPA +SGRDIIG+A TGSGKT+ F+LP+ +Q P
Sbjct: 490 DVIKRLGYDSPTPIQSQAIPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQR---PVE 546
Query: 217 PGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
EGP G+I+ P+RELA Q + ++ + AL
Sbjct: 547 TSEGPVGIIMTPTRELAVQIYREMRPFIRAL 577
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIG+A TGSGKT+ F+LP+ +Q P EGP G+I+ P+RELA Q +
Sbjct: 513 SGRDIIGVAKTGSGKTMAFLLPMFRHIKDQR---PVETSEGPVGIIMTPTRELAVQIYRE 569
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKK 97
++ + AL LR GG P+++ + +KK
Sbjct: 570 MRPFIRAL--GLRAACVYGGAPISEQIAEMKK 599
>gi|345569652|gb|EGX52517.1| hypothetical protein AOL_s00043g11 [Arthrobotrys oligospora ATCC
24927]
Length = 531
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R ++ V G DVP SF P ++ ++A+G K+PTPIQ QG P ALSGRD
Sbjct: 108 DAYRTQRQMRVSGRDVPKPVQSFDEAGFPAYVMNEVKAQGFKEPTPIQAQGWPMALSGRD 167
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 168 VVGIAETGSGKTLTYCLPSIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 216
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 164 SGRDVVGIAETGSGKTLTYCLPSIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQ 219
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + I R GGVP Q + + +G++
Sbjct: 220 EVTKFGKSSRI--RNTCVYGGVPRGQQIRELARGVE 253
>gi|84996983|ref|XP_953213.1| DEAD-box family RNA-dependent helicase [Theileria annulata strain
Ankara]
gi|65304209|emb|CAI76588.1| DEAD-box family RNA-dependent helicase, putative [Theileria
annulata]
Length = 616
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 70/116 (60%), Gaps = 7/116 (6%)
Query: 124 DIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D IRR I +V G DVP F P ++ ++E+ G K+PTPIQVQ P ALSGR
Sbjct: 167 DKIRREKEITVVHGRDVPKPVVKFEYTSFPRYILSSIESAGFKEPTPIQVQAWPIALSGR 226
Query: 183 DIIGIAFTG---SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
D+IGIA TG SGKTL F+LP ++ Q PG+GP L++ P+RELA Q
Sbjct: 227 DMIGIAETGITRSGKTLAFLLPAIVHINAQAL---LRPGDGPIVLVLAPTRELAEQ 279
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 8 RDIIGIAFTG---SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 64
RD+IGIA TG SGKTL F+LP ++ Q PG+GP L++ P+RELA Q +
Sbjct: 226 RDMIGIAETGITRSGKTLAFLLPAIVHINAQAL---LRPGDGPIVLVLAPTRELAEQIKE 282
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L+T +A GGVP +++G++
Sbjct: 283 TALVFGRS--SKLKTSVAYGGVPKKFQTIALRRGVE 316
>gi|393216665|gb|EJD02155.1| RNA helicase [Fomitiporia mediterranea MF3/22]
Length = 416
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
RR +++V G +VP SF PE L+ + A+G PTPIQ Q P ALSGRD++
Sbjct: 76 FRREKQVIVSGRNVPKPIFSFEEAGFPEYLMSTIRAQGFPSPTPIQCQAWPMALSGRDMV 135
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TG GKT+ F LP ++ Q P L PG+GP L++ P+RELA Q IQ C
Sbjct: 136 GIAQTGIGKTIAFALPAILHINAQ----PLLAPGDGPIALVLAPTRELAVQ----IQQEC 187
Query: 245 AALPIGS 251
A S
Sbjct: 188 AKFGSNS 194
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TG GKT+ F LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 130 SGRDMVGIAQTGIGKTIAFALPAILHINAQ----PLLAPGDGPIALVLAPTRELAVQ--- 182
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ CA +R GG P + +++G++
Sbjct: 183 -IQQECAKFGSNSRIRNIAVYGGAPKGPQIRDLQRGVE 219
>gi|19173435|ref|NP_597238.1| P68-LIKE PROTEIN (DEAD BOX FAMILY OF RNA HELICASES)
[Encephalitozoon cuniculi GB-M1]
gi|74664187|sp|Q8SRB2.1|DBP2_ENCCU RecName: Full=ATP-dependent RNA helicase DBP2
gi|19171024|emb|CAD26414.1| P68-LIKE PROTEIN (DEAD BOX FAMILY OF RNA HELICASES)
[Encephalitozoon cuniculi GB-M1]
gi|449328762|gb|AGE95038.1| p68-like protein [Encephalitozoon cuniculi]
Length = 495
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ ++V+G +VP F +V +L KG +PT IQ QG P ALSGRD++
Sbjct: 69 FRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMV 128
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
GIA TGSGKTL F+LP L+ +Q+ P G+GP L++ P+REL Q ++ +C
Sbjct: 129 GIAQTGSGKTLSFILPALVHAKDQQ---PLRRGDGPIVLVLAPTRELVMQIKKVVDEFCG 185
Query: 246 ALPIGS 251
+ S
Sbjct: 186 MFNLRS 191
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL F+LP L+ +Q+ P G+GP L++ P+REL Q +
Sbjct: 123 SGRDMVGIAQTGSGKTLSFILPALVHAKDQQ---PLRRGDGPIVLVLAPTRELVMQIKKV 179
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
+ +C LR+ GG + + +G + I T P ++ L DQ H
Sbjct: 180 VDEFCGMF--NLRSTAVYGGASSQPQIRALHEGAEV--VIAT----PGRLIDLHDQGH 229
>gi|47217820|emb|CAG07234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 737
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R+ L + V G P SF E L+ + +PTPIQ QG+P ALSGRD+I
Sbjct: 83 LRQKLNLRVSGAAPPKPSTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMI 142
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
GIA TGSGKT F+ P+L+ ++Q+ GEGP +I+CP+REL +Q H + +
Sbjct: 143 GIAKTGSGKTAAFIWPMLVHIMDQK---ELEAGEGPIAVIVCPTRELCQQIHAECKRFGK 199
Query: 246 ALPIGS 251
A + S
Sbjct: 200 AYSLRS 205
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT F+ P+L+ ++Q+ GEGP +I+CP+REL +Q H
Sbjct: 137 SGRDMIGIAKTGSGKTAAFIWPMLVHIMDQK---ELEAGEGPIAVIVCPTRELCQQIHAE 193
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A LR+ GG M + +++G +
Sbjct: 194 CKRFGKAY--SLRSVAVYGGGSMWEQAKALQEGAE 226
>gi|356526023|ref|XP_003531619.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
max]
Length = 507
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ D + R+ I VEG D+P +F PE +++ + G +PTPIQ Q
Sbjct: 71 AVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFHDAGFPEYVLQEITKAGFTEPTPIQSQ 130
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 131 GWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILNPGDGPIVLVLAPTREL 186
Query: 233 ARQTHDIIQYYCAALPIGS 251
A Q + A+ I S
Sbjct: 187 AVQIQQETTKFGASSRIKS 205
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 139 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILNPGDGPIVLVLAPTRELAVQIQQET 194
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 195 TKFGASSRIK-STCI-YGGVPKGPQVRDLQKGVE 226
>gi|300707737|ref|XP_002996065.1| hypothetical protein NCER_100895 [Nosema ceranae BRL01]
gi|239605329|gb|EEQ82394.1| hypothetical protein NCER_100895 [Nosema ceranae BRL01]
Length = 528
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
+L D+ D R I + GD VP F ++ + K PTPIQ QG P
Sbjct: 101 NLTDREADNFRNQHDIKISGD-VPHPYVKFEHAPFENEVLNNFKLKAFTSPTPIQAQGWP 159
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 236
AL+G+D++GIA TGSGKTL FVLP L+ Q +P G+GP L++ P+REL Q
Sbjct: 160 MALTGKDMVGIAQTGSGKTLSFVLPALIHARAQ---IPLRSGDGPIVLVLAPTRELCLQI 216
Query: 237 HDIIQYYC 244
D+ YC
Sbjct: 217 KDVFDEYC 224
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
+D++GIA TGSGKTL FVLP L+ Q +P G+GP L++ P+REL Q D+
Sbjct: 165 KDMVGIAQTGSGKTLSFVLPALIHARAQ---IPLRSGDGPIVLVLAPTRELCLQIKDVFD 221
Query: 68 YYCAALPIPLRTCLAIGGV 86
YC +R GGV
Sbjct: 222 EYCRFF--NMRCTAVYGGV 238
>gi|255572963|ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 505
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ ++ + R+ I VEG DVP SFR + P+ ++ + G +PTPIQ Q
Sbjct: 69 SVAAMSEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVLEEVTRAGFVEPTPIQAQ 128
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 129 GWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTREL 184
Query: 233 ARQTHDIIQYYCAALPI 249
A Q + A+ I
Sbjct: 185 AVQIQQEATKFGASSRI 201
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 137 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQIQQEA 192
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 193 TKFGASSRIK-NTCI-YGGVPKGPQVRDLQKGVE 224
>gi|302815317|ref|XP_002989340.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
gi|300142918|gb|EFJ09614.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
Length = 653
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
+QY K + I L ++ R+++ + G DVP F+ + L L+ A
Sbjct: 138 LQYAPFDKDFYEEDASISGLSEEDVTSYRQSIGVRTSGFDVPRPVRQFKELGLDSLLMGA 197
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +G + PTPIQ Q +P LSGRDIIGIA TGSGKT FVLP+++ ++QE G
Sbjct: 198 ITKQGYENPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQE---ELGKG 254
Query: 219 EGPYGLIICPSRELARQ 235
EGP G+I P+RELA+Q
Sbjct: 255 EGPIGVICAPTRELAQQ 271
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT FVLP+++ ++QE GEGP G+I P+RELA+Q +
Sbjct: 219 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQE---ELGKGEGPIGVICAPTRELAQQIFNE 275
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + A P +R GG+ +K G
Sbjct: 276 SRKF--AKPYGIRVSGVFGGMSKLDQFKELKAG 306
>gi|223590058|sp|A5DDF4.2|PRP5_PICGU RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|190345338|gb|EDK37207.2| hypothetical protein PGUG_01305 [Meyerozyma guilliermondii ATCC
6260]
Length = 862
Score = 96.7 bits (239), Expect = 7e-18, Method: Composition-based stats.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
++Y K + P + +P + +R + I V G D P + + LP S++
Sbjct: 220 MEYTSVRKKFYTPPEELKDVPPEKVTALRTAMDGIKVRGSDCPMPIQKWAQLGLPSSIMT 279
Query: 158 ALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
LE K G P+PIQ Q +PA +SGRDIIG+A TGSGKTL FV+P++ ++Q P
Sbjct: 280 VLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIPLIRHIMDQP---PLK 336
Query: 217 PGEGPYGLIICPSRELARQ 235
G+GP G+I+ P+RELA Q
Sbjct: 337 SGDGPIGVILTPTRELALQ 355
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIG+A TGSGKTL FV+P++ ++Q P G+GP G+I+ P+RELA Q
Sbjct: 303 SGRDIIGVANTGSGKTLAFVIPLIRHIMDQP---PLKSGDGPIGVILTPTRELALQIQKE 359
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A + L C GG P+ + +K+G +
Sbjct: 360 LVNFTQA--VELSVCCCYGGSPIESQIADLKRGTE 392
>gi|297847866|ref|XP_002891814.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata]
gi|297337656|gb|EFH68073.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata]
Length = 501
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 5/139 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ D + R+ I VEG D+P SFR + P+ ++ ++ G +PTPIQ Q
Sbjct: 69 TVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEIKKAGFTEPTPIQSQ 128
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P A+ GRD+IGIA TGSGKT+ ++LP ++ Q P L PG+GP L++ P+REL
Sbjct: 129 GWPMAMKGRDLIGIAETGSGKTISYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTREL 184
Query: 233 ARQTHDIIQYYCAALPIGS 251
A Q + ++ I S
Sbjct: 185 AVQIQQEASKFGSSSKIKS 203
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKT+ ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 137 RDLIGIAETGSGKTISYLLPAIVHVNAQ----PILAPGDGPIVLVLAPTRELAVQIQQEA 192
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ I TC+ GGVP + ++KG++
Sbjct: 193 SKFGSSSKIK-STCI-YGGVPKGPQVRDLQKGVE 224
>gi|195069805|ref|XP_001997032.1| GH23229 [Drosophila grimshawi]
gi|193906224|gb|EDW05091.1| GH23229 [Drosophila grimshawi]
Length = 649
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
DQV ++ RR L + V G P SF + L++++ +PTPIQ Q +P AL
Sbjct: 269 DQVREL-RRTLGVKVSGALPPKPVSSFGHFGFDDQLLKSVRKAEYTQPTPIQAQAVPTAL 327
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
SGRDIIGIA TGSGKT F+ P+L ++Q PG+GP GLI+ P+REL+ Q ++
Sbjct: 328 SGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRE---LRPGDGPIGLILAPTRELSLQIYNE 384
Query: 240 IQYYCAALPIG 250
+ + I
Sbjct: 385 AKKFGKVYNIN 395
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIA TGSGKT F+ P+L ++Q PG+GP GLI+ P+REL+ Q ++ +
Sbjct: 330 RDIIGIAKTGSGKTAAFIWPLLTHLMDQRE---LRPGDGPIGLILAPTRELSLQIYNEAK 386
Query: 68 YYCAALPIPLRTCLAIGGVPMNQS 91
+ I + C GG QS
Sbjct: 387 KFGKVYNINVVCCYG-GGSKWEQS 409
>gi|258577027|ref|XP_002542695.1| ATP-dependent RNA helicase p62 [Uncinocarpus reesii 1704]
gi|237902961|gb|EEP77362.1| ATP-dependent RNA helicase p62 [Uncinocarpus reesii 1704]
Length = 1336
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ + V G +VP SF P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 899 DAFRKTHEMTVYGKNVPRPVESFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRD 958
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 959 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 1007
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 957 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQTEI 1012
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 1013 TKFGKSSRI--RNTCVYGGVPRGPQIRDLARGVE 1044
>gi|428161491|gb|EKX30867.1| hypothetical protein GUITHDRAFT_83612, partial [Guillardia theta
CCMP2712]
Length = 464
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 16/158 (10%)
Query: 89 NQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRL 148
NQSL +K P + +L + D RR +I V G D P C +F
Sbjct: 5 NQSLSHFEKNFYQEHP---------AVTALTREEVDDFRREKQIQVSGRDCPKPCRTFEE 55
Query: 149 MKLPESLVRALEAKG--IKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFC 206
P+ ++ +E + KPTP+Q Q P ALSGRD I IA TGSGKTL F+LP ++
Sbjct: 56 GSFPDYILSVVEREYGPNAKPTPVQAQAWPVALSGRDCINIAETGSGKTLAFLLPAIVHI 115
Query: 207 LEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYY 243
Q P+L PG+GP LI+ P+RELA Q H+ Y
Sbjct: 116 NAQ----PYLKPGDGPIVLILAPTRELALQIHEARNLY 149
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD I IA TGSGKTL F+LP ++ Q P+L PG+GP LI+ P+RELA Q H+
Sbjct: 89 SGRDCINIAETGSGKTLAFLLPAIVHINAQ----PYLKPGDGPIVLILAPTRELALQIHE 144
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y + I L +C+ GG P +++G++
Sbjct: 145 ARNLYGHSSNIKL-SCV-YGGAPKGAQASELRRGVE 178
>gi|403342187|gb|EJY70406.1| hypothetical protein OXYTRI_08845 [Oxytricha trifallax]
Length = 1227
Score = 96.7 bits (239), Expect = 8e-18, Method: Composition-based stats.
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 121 QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
+V + + N I V G P S+ LP+ ++ +E K +KP PIQ Q +PA +S
Sbjct: 561 EVQEFRKLNGDIKVRGLKCPKPVSSWYQCGLPDGVLEVIERKNFQKPFPIQCQSLPAIMS 620
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
GRD+IGIA TGSGKTL +VLP++ +Q P GEG GLI+ P+RELA Q +
Sbjct: 621 GRDVIGIAETGSGKTLAYVLPMIRHIRDQR---PLEEGEGMIGLIMAPTRELAFQIY 674
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL +VLP++ +Q P GEG GLI+ P+RELA Q +
Sbjct: 620 SGRDVIGIAETGSGKTLAYVLPMIRHIRDQR---PLEEGEGMIGLIMAPTRELAFQIYKE 676
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A I R GG + L +K+G +
Sbjct: 677 SKAFAKACGI--RVVCVYGGANVAGQLSELKRGAE 709
>gi|294901515|ref|XP_002777392.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239885023|gb|EER09208.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 531
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 79/126 (62%), Gaps = 6/126 (4%)
Query: 115 ILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ S+ D +R++ +I +V G VP +F P+ ++ ++ G +KP+PIQVQ
Sbjct: 87 VASMSQDEVDKVRKDRQITVVHGKGVPKPIVTFEQAGFPDYILHEIKQAGFEKPSPIQVQ 146
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSREL 232
G P A+SGRD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+REL
Sbjct: 147 GWPVAMSGRDMVGIAETGSGKTLAFLLPAIVHINAQ----PYLQRGDGPIVLVLAPTREL 202
Query: 233 ARQTHD 238
A QT +
Sbjct: 203 AVQTQE 208
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA QT +
Sbjct: 153 SGRDMVGIAETGSGKTLAFLLPAIVHINAQ----PYLQRGDGPIVLVLAPTRELAVQTQE 208
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GG P + G++
Sbjct: 209 ECNRFGRSSRI--RNTCVYGGTPRGPQARALANGVE 242
>gi|158530232|gb|ABW71831.1| putative RNA helicase [Phytophthora infestans]
Length = 544
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
+R+ +I+V G VP SF PE ++ + G KPTPIQ QG P ALSGRD++G
Sbjct: 124 KRDNQIIVSGKGVPKCVLSFEEASFPEYVLEEVVRLGFDKPTPIQCQGWPMALSGRDMVG 183
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCA 245
I+ TGSGKTL F+LP ++ Q P+L PG+GP L+I P+RELA Q IQ C
Sbjct: 184 ISATGSGKTLAFLLPAIVHINAQ----PYLQPGDGPIVLMIAPTRELAVQ----IQAECN 235
Query: 246 ALPIGS 251
S
Sbjct: 236 KFGASS 241
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GI+ TGSGKTL F+LP ++ Q P+L PG+GP L+I P+RELA Q
Sbjct: 177 SGRDMVGISATGSGKTLAFLLPAIVHINAQ----PYLQPGDGPIVLMIAPTRELAVQIQA 232
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + +++G++
Sbjct: 233 ECNKFGASSKIK-NTCV-YGGVPKGGQIADLRRGVE 266
>gi|391343747|ref|XP_003746167.1| PREDICTED: probable ATP-dependent RNA helicase DDX17, partial
[Metaseiulus occidentalis]
Length = 664
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 76/140 (54%)
Query: 100 QYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRAL 159
Q ND K +R +Q D R+ LR+ + G +VP SF LP+ L+R L
Sbjct: 20 QLNDFQKNFYRQHPDTELRTEQDIDQQRQELRVTIRGSNVPMPYRSFEEASLPDFLIRHL 79
Query: 160 EAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE 219
+ ++PT IQ QG P ALSGRD++GIA TGSGKTL + LP ++ + P
Sbjct: 80 QQVKFQEPTAIQAQGCPIALSGRDMVGIAQTGSGKTLAYTLPAIVHIWGNNGHRGYRPPG 139
Query: 220 GPYGLIICPSRELARQTHDI 239
P LI+ P+RELA+Q +
Sbjct: 140 SPMVLILAPTRELAQQIQQV 159
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL + LP ++ + P P LI+ P+RELA+Q +
Sbjct: 100 SGRDMVGIAQTGSGKTLAYTLPAIVHIWGNNGHRGYRPPGSPMVLILAPTRELAQQIQQV 159
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ I ++ GG P L I +G
Sbjct: 160 AADFGRGAGI--KSVCIFGGAPKGGQLREIDRG 190
>gi|294898580|ref|XP_002776285.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239883195|gb|EER08101.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 654
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
Query: 112 PRCILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPI 170
PR P++V +++RR L I ++ G DVP F LP+ ++ ++ G PTPI
Sbjct: 167 PRVAAMTPEEV-ELVRRRLDIEIIHGVDVPNPITQFEEACLPDYIMVEIQKAGFVSPTPI 225
Query: 171 QVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPS 229
QVQG P ALSGRD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+
Sbjct: 226 QVQGWPVALSGRDMVGIAETGSGKTLAFLLPAVVHINAQ----PYLQKGDGPIVLVLAPT 281
Query: 230 RELARQ 235
RELA Q
Sbjct: 282 RELALQ 287
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q +
Sbjct: 235 SGRDMVGIAETGSGKTLAFLLPAVVHINAQ----PYLQKGDGPIVLVLAPTRELALQIKE 290
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I C GGVP +++ G++
Sbjct: 291 ECDRFGRSSRISNTCCY--GGVPRGPQARMLQNGVE 324
>gi|195127173|ref|XP_002008043.1| GI12051 [Drosophila mojavensis]
gi|193919652|gb|EDW18519.1| GI12051 [Drosophila mojavensis]
Length = 797
Score = 96.7 bits (239), Expect = 8e-18, Method: Composition-based stats.
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 4/119 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
+QV ++ R L + V G P SF + L++A+ +PTPIQ Q +PAAL
Sbjct: 252 EQVREL-RHTLGVKVSGAQPPKPVTSFGHFGFDDQLLKAVRKAEYTQPTPIQAQAVPAAL 310
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
SGRDIIGIA TGSGKT F+ P+L ++Q G+GP GLI+ P+REL+ Q ++
Sbjct: 311 SGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRE---LRAGDGPIGLILAPTRELSLQIYN 366
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT F+ P+L ++Q G+GP GLI+ P+REL+ Q ++
Sbjct: 311 SGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRE---LRAGDGPIGLILAPTRELSLQIYNE 367
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + I + C GG QS
Sbjct: 368 AKKFGKVYNINVVCCYG-GGSKWEQS 392
>gi|294894930|ref|XP_002775023.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239880806|gb|EER06839.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 647
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
Query: 112 PRCILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPI 170
PR P++V +++RR L I ++ G DVP F LP+ ++ ++ G PTPI
Sbjct: 167 PRVAAMTPEEV-ELVRRRLDIEIIHGVDVPNPITQFEEACLPDYIMVEIQKAGFVSPTPI 225
Query: 171 QVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPS 229
QVQG P ALSGRD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+
Sbjct: 226 QVQGWPVALSGRDMVGIAETGSGKTLAFLLPAVVHINAQ----PYLQKGDGPIVLVLAPT 281
Query: 230 RELARQ 235
RELA Q
Sbjct: 282 RELALQ 287
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q +
Sbjct: 235 SGRDMVGIAETGSGKTLAFLLPAVVHINAQ----PYLQKGDGPIVLVLAPTRELALQIKE 290
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I C GGVP +++ G++
Sbjct: 291 ECDRFGRSSRISNTCCY--GGVPRGPQARMLQNGVE 324
>gi|358347102|ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 781
Score = 96.7 bits (239), Expect = 9e-18, Method: Composition-based stats.
Identities = 50/118 (42%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I +G +P S+ KL + L++A+E G K P+PIQ+ IP L RD+
Sbjct: 267 IFREDYNISYKGSKIPRPMRSWVESKLSQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDV 326
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP----GEGPYGLIICPSRELARQTHD 238
IG+A TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q D
Sbjct: 327 IGVAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQIED 380
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 8/61 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP----GEGPYGLIICPSRELARQTH 63
RD+IG+A TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 324 RDVIGVAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQIE 379
Query: 64 D 64
D
Sbjct: 380 D 380
>gi|396081911|gb|AFN83525.1| DEAD box RNA helicase-like protein [Encephalitozoon romaleae
SJ-2008]
Length = 493
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ ++V+G ++P F + P +V L KG + PTPIQ QG P ALSGRD++
Sbjct: 69 FRKASEMVVKGMNIPHPIHKFEDVGFPHRVVEDLVRKGFEGPTPIQAQGWPMALSGRDMV 128
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
GIA TGSGKTL F+LP L+ +Q P G+GP L++ P+REL Q + +C
Sbjct: 129 GIAQTGSGKTLSFILPALVHAKDQP---PLRRGDGPIVLVLAPTRELVMQIKKVADEFCE 185
Query: 246 ALPIGS 251
+ S
Sbjct: 186 MFDLRS 191
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL F+LP L+ +Q P G+GP L++ P+REL Q +
Sbjct: 123 SGRDMVGIAQTGSGKTLSFILPALVHAKDQP---PLRRGDGPIVLVLAPTRELVMQIKKV 179
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+C LR+ GG + + +G +
Sbjct: 180 ADEFCEMF--DLRSTAVYGGASSQPQIRALHEGAE 212
>gi|158284342|ref|XP_306246.4| Anopheles gambiae str. PEST AGAP012523-PA [Anopheles gambiae str.
PEST]
gi|157021090|gb|EAA02455.4| AGAP012523-PA [Anopheles gambiae str. PEST]
Length = 720
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R L + V G P SF ESL++++ PTPIQ Q IPAALSGRDII
Sbjct: 185 LRLTLGVKVSGPMPPHPVTSFAHFGFDESLMKSIRKSEFSTPTPIQAQAIPAALSGRDII 244
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
GIA TGSGKT F+ P+L+ ++Q PG+GP GLI+ P+REL+ Q ++ + +
Sbjct: 245 GIAKTGSGKTAAFLWPMLVHIMDQRE---LGPGDGPIGLILAPTRELSLQIYNEAKKFGK 301
Query: 246 ALPI 249
I
Sbjct: 302 VYNI 305
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIA TGSGKT F+ P+L+ ++Q PG+GP GLI+ P+REL+ Q ++ +
Sbjct: 241 RDIIGIAKTGSGKTAAFLWPMLVHIMDQRE---LGPGDGPIGLILAPTRELSLQIYNEAK 297
Query: 68 YYCAALPIPLRTCLAIGGVPMNQS 91
+ I + C GG QS
Sbjct: 298 KFGKVYNISICCCYG-GGSKWEQS 320
>gi|66816623|ref|XP_642321.1| hypothetical protein DDB_G0277857 [Dictyostelium discoideum AX4]
gi|74997195|sp|Q54Y81.1|DDX23_DICDI RecName: Full=ATP-dependent RNA helicase ddx23; AltName:
Full=ATP-dependent RNA helicase helB2; AltName:
Full=DEAD box protein 23
gi|60470121|gb|EAL68101.1| hypothetical protein DDB_G0277857 [Dictyostelium discoideum AX4]
Length = 834
Score = 96.3 bits (238), Expect = 9e-18, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
G Q ++ T W + + + S+ + I + + I +G P +++ LP ++
Sbjct: 368 GKQISELPDTHW-SKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILE 426
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
A+ G +KP+PIQ+Q IP +L+GRDI+GIA TGSGKT FV+P+L++ +Q
Sbjct: 427 AIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTE 486
Query: 218 GEGPYGLIICPSRELARQ----THDIIQYY 243
+GPY L++ P+REL +Q T + Q++
Sbjct: 487 ADGPYALVMAPTRELVQQIEKETRNFAQHF 516
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 23/130 (17%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ----TH 63
RDI+GIA TGSGKT FV+P+L++ +Q +GPY L++ P+REL +Q T
Sbjct: 451 RDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETR 510
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
+ Q++ R +GG + + KG + I++ P +++
Sbjct: 511 NFAQHF------GFRVVSLVGGQSIEDQAYQVSKGCE-------------IIIATPGRLN 551
Query: 124 DIIRRNLRIL 133
D + + +L
Sbjct: 552 DCLEKRYLVL 561
>gi|226487070|emb|CAX75400.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
gi|226487074|emb|CAX75402.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
gi|226487078|emb|CAX75404.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
Length = 768
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
S P+ + R+ ++ + G DVP SF + +P+ ++ + G + PTPIQ QG P
Sbjct: 62 SRPEVEVEAFRKKYKMSLSGRDVPRPVLSFNELSVPDYILSVIAKNGWQLPTPIQSQGWP 121
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 236
ALSGRD++GIA TGSGKT F+LP ++ + Q L EGP L++ P+RELA+Q
Sbjct: 122 MALSGRDVVGIAQTGSGKTATFLLPAVIHIMAQPR---LLRNEGPICLVLVPTRELAQQV 178
Query: 237 HDIIQYYCAA 246
+ + + A
Sbjct: 179 LSVAKEFADA 188
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKT F+LP ++ + Q L EGP L++ P+RELA+Q +
Sbjct: 125 SGRDVVGIAQTGSGKTATFLLPAVIHIMAQPR---LLRNEGPICLVLVPTRELAQQVLSV 181
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + A LR GG L ++KG
Sbjct: 182 AKEFADA--ASLRAICFYGGSAKGTQLREMQKG 212
>gi|449296632|gb|EMC92651.1| hypothetical protein BAUCODRAFT_95810 [Baudoinia compniacensis UAMH
10762]
Length = 485
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR +I V+G DVP +F P ++ ++A+G KPT IQ QG P ALSGRD
Sbjct: 41 DAFRREHQITVQGRDVPKPVETFDEAGFPGYVMNEVKAQGFSKPTAIQSQGWPMALSGRD 100
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q + +
Sbjct: 101 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQEEVSK 156
Query: 243 YCAALPI 249
+ + I
Sbjct: 157 FGKSSRI 163
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q +
Sbjct: 97 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQE 152
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + I R GGVP + + +G++
Sbjct: 153 EVSKFGKSSRI--RNTCVYGGVPKGGQIRDLARGVE 186
>gi|354545573|emb|CCE42301.1| hypothetical protein CPAR2_808500 [Candida parapsilosis]
Length = 863
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
Query: 93 DVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKL 151
D+ I Y K ++ P + S+ + ++R +L I V+G++V P + + L
Sbjct: 224 DIDHSQISYLSFKKDFYKVPFELSSMSEDEISLLRMDLDDIRVKGNNVTPPFTKWSQLLL 283
Query: 152 PESLVRALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
PE+++ + K KP+PIQ Q IP LSGRD IG+A TGSGKTL +V+P++ EQ
Sbjct: 284 PENIISVVNDKLRFDKPSPIQAQAIPVILSGRDFIGVAKTGSGKTLSYVIPMMRHIQEQA 343
Query: 211 TKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
P G+GP +I+ P+RELA Q + + AL
Sbjct: 344 ---PSASGDGPVAVILSPTRELALQIEQEVLKFAKAL 377
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IG+A TGSGKTL +V+P++ EQ P G+GP +I+ P+RELA Q
Sbjct: 313 SGRDFIGVAKTGSGKTLSYVIPMMRHIQEQA---PSASGDGPVAVILSPTRELALQIEQE 369
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGI 99
+ + AL + C GG + + +++G+
Sbjct: 370 VLKFAKALDKRVTCCY--GGSKIENQISDLRRGV 401
>gi|307111894|gb|EFN60128.1| hypothetical protein CHLNCDRAFT_56582 [Chlorella variabilis]
Length = 863
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
LP+SL +A+E G KKP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L++ +Q
Sbjct: 446 LPKSLRKAVERAGYKKPSPIQMAAIPLGLQFRDVIGIAETGSGKTAAFVLPMLVYIEKQP 505
Query: 211 TKL--PFLPGEGPYGLIICPSRELARQTHD 238
L P + EGPY +++ P+RELA+Q +
Sbjct: 506 PMLGNPDIEAEGPYSVVLAPTRELAQQIEE 535
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKL--PFLPGEGPYGLIICPSRELARQTHDI 65
RD+IGIA TGSGKT FVLP+L++ +Q L P + EGPY +++ P+RELA+Q +
Sbjct: 477 RDVIGIAETGSGKTAAFVLPMLVYIEKQPPMLGNPDIEAEGPYSVVLAPTRELAQQIEE- 535
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ A R +GG + ++KG + +++ P ++ D
Sbjct: 536 -EARNLAHYTEFRVVSVVGGQSIEDQGVALRKGCE-------------IVVATPGRLVDC 581
Query: 126 IRRNLRIL 133
I R+ +L
Sbjct: 582 IERSYAVL 589
>gi|169610529|ref|XP_001798683.1| hypothetical protein SNOG_08367 [Phaeosphaeria nodorum SN15]
gi|160702090|gb|EAT84643.2| hypothetical protein SNOG_08367 [Phaeosphaeria nodorum SN15]
Length = 668
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P P++V D R+ ++ V+G ++P +F P ++ ++A+G KPT IQ
Sbjct: 331 PAVTARTPEEV-DAYRKEHQMTVQGTNIPKPVTTFDEAGFPSYVMSEVKAQGFDKPTAIQ 389
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSR 230
QG P ALSGRD++G+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+R
Sbjct: 390 AQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTR 445
Query: 231 ELARQTHDIIQYY 243
ELA Q I +
Sbjct: 446 ELAVQIQQEISKF 458
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 398 SGRDVVGVAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQ 453
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 454 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLARGVE 487
>gi|426199199|gb|EKV49124.1| hypothetical protein AGABI2DRAFT_65810 [Agaricus bisporus var.
bisporus H97]
Length = 494
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 113 RCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + D+ + RR I V+G +VP SF P+ L+ ++ A+G PTPIQ
Sbjct: 30 KKVSARSDREIEEFRRTKEIKVQGRNVPRPISSFEEAGFPQYLMTSIRAQGFSSPTPIQC 89
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRE 231
Q P AL+GRD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RE
Sbjct: 90 QAWPMALTGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRE 145
Query: 232 LARQTHDIIQYYCAALPIGS 251
LA Q IQ C S
Sbjct: 146 LAVQ----IQQECTKFGSNS 161
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 99 RDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRELAVQ----I 150
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C +R GG P + +++G++
Sbjct: 151 QQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVE 186
>gi|399217255|emb|CCF73942.1| unnamed protein product [Babesia microti strain RI]
Length = 530
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I++ G DVP SF P L+ AL+ G +PT IQ QG P ALSGRD+IGIA TG
Sbjct: 108 IIISGKDVPKPVTSFEYSSFPNYLLDALKQVGFTEPTAIQAQGWPIALSGRDMIGIAETG 167
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
SGKTL F+LP ++ Q+ PG+GP L++ P+REL Q
Sbjct: 168 SGKTLAFLLPSIVHINAQQL---LRPGDGPIVLVLAPTRELVEQ 208
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL F+LP ++ Q+ PG+GP L++ P+REL Q +
Sbjct: 158 RDMIGIAETGSGKTLAFLLPSIVHINAQQL---LRPGDGPIVLVLAPTRELVEQIRNECN 214
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I + +A GGVP + +++G++
Sbjct: 215 KFGHSSRI--KNTVAYGGVPKRSQIADLRRGVE 245
>gi|389748974|gb|EIM90151.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Stereum hirsutum FP-91666 SS1]
Length = 809
Score = 95.9 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 10/130 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G ++P S+ +P+ ++ +++ G K+P+PIQ Q IP L RDI
Sbjct: 363 IFREDFSIAARGGNIPHPLRSWLESTIPQQILDVVDSVGYKEPSPIQRQAIPIGLQNRDI 422
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FV+P+L F +KLP E GPY LI+ P+RELA+Q
Sbjct: 423 IGIAETGSGKTAAFVIPMLTFI----SKLPPFTDENRHLGPYSLILAPTRELAQQIESEA 478
Query: 241 QYYCAALPIG 250
+ + A P+G
Sbjct: 479 RKF--ATPLG 486
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 23/133 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQT 62
+RDIIGIA TGSGKT FV+P+L F +KLP E GPY LI+ P+RELA+Q
Sbjct: 419 NRDIIGIAETGSGKTAAFVIPMLTFI----SKLPPFTDENRHLGPYSLILAPTRELAQQI 474
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQV 122
+ + A P+ + +GG + + +++G + I++ P ++
Sbjct: 475 ESEARKF--ATPLGFKCVSIVGGRAVEEQQFNLREGAE-------------IIIATPGRL 519
Query: 123 HDIIRRNLRILVE 135
D++ R++ +L +
Sbjct: 520 KDVLERHVLVLSQ 532
>gi|70949030|ref|XP_743963.1| snrnp protein [Plasmodium chabaudi chabaudi]
gi|56523710|emb|CAH74477.1| snrnp protein, putative [Plasmodium chabaudi chabaudi]
Length = 667
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
+ D+ I R + I ++G VPP + L L++A++ +KPTPIQ+Q IP
Sbjct: 216 DMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSSDLLKAIKKAKYEKPTPIQMQAIP 275
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSREL 232
AL RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSREL
Sbjct: 276 IALEMRDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALIIAPSREL 331
Query: 233 ARQTHDIIQYYCA 245
A Q ++ + +
Sbjct: 332 AIQIYEETNKFAS 344
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA Q +
Sbjct: 281 RDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALIIAPSRELAIQIY 336
Query: 64 DIIQY---YCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ YC+ RT +GG +++G++
Sbjct: 337 EETNKFASYCSC-----RTVAVVGGRNAEAQAFELRRGVE 371
>gi|124506095|ref|XP_001351645.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
gi|23504573|emb|CAD51452.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
Length = 1490
Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 88 MNQSL-DVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCS 145
MN+ L +V I Y K + + I ++ D D+ R+N I+V G + P
Sbjct: 665 MNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQY 724
Query: 146 FRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMF 205
F LP +++ LE K KK IQ+Q IPA + GRD+I IA TGSGKTL ++ P++
Sbjct: 725 FYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRH 784
Query: 206 CLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
L QE P +GP +I+ P+REL+ Q + + YC A+ I
Sbjct: 785 VLHQE---PLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNI 825
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+I IA TGSGKTL ++ P++ L QE P +GP +I+ P+REL+ Q + +
Sbjct: 761 RDVIAIAETGSGKTLSYLFPVIRHVLHQE---PLRNNDGPISIILTPTRELSIQVKNEAK 817
Query: 68 YYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
YC A+ I + LA+ GG + + L V+KKG++
Sbjct: 818 IYCKAVNIEI---LAVYGGSNIARQLKVLKKGVE 848
>gi|342320678|gb|EGU12617.1| Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Rhodotorula
glutinis ATCC 204091]
Length = 903
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 72/127 (56%), Gaps = 8/127 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G +P S++ K+P+ ++ A+E G K+P+PIQ Q IP L RD+
Sbjct: 446 IFREDFSIGARGGHIPLPLRSWKESKIPQPILEAIEEIGYKEPSPIQRQAIPIGLQNRDM 505
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT F +P+L + +LP L E GPY L++ P+RELA+Q
Sbjct: 506 IGIAETGSGKTAAFTIPMLAYI----ARLPPLSDENRSKGPYALVLAPTRELAQQIEAET 561
Query: 241 QYYCAAL 247
+C L
Sbjct: 562 NKFCRVL 568
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQT 62
+RD+IGIA TGSGKT F +P+L + +LP L E GPY L++ P+RELA+Q
Sbjct: 502 NRDMIGIAETGSGKTAAFTIPMLAYI----ARLPPLSDENRSKGPYALVLAPTRELAQQI 557
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQV 122
+C L R +GG + + ++ G + +++ P ++
Sbjct: 558 EAETNKFCRVL--GYRCVSIVGGKAIEEQQFNMRDGAE-------------IVIATPGRL 602
Query: 123 HDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
D I R++ +L + C++ +M + +V
Sbjct: 603 KDCIERSVLVLAQ--------CTYVVMDEADRMV 628
>gi|321467260|gb|EFX78251.1| hypothetical protein DAPPUDRAFT_213150 [Daphnia pulex]
Length = 487
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 104 PIKTSWRAPRCILSLPDQVHDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
P + ++ P L++ VHDI R + I + G DVP SF P+ ++ +
Sbjct: 19 PFEKNFYKPHPNLTVK-SVHDIEQYRASKDITIRGRDVPFPITSFDEASFPDYVMTEIRR 77
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEG 220
+G K+PT IQ QG P ALSG +++GIA TGSGKTL + LP ++ Q P+L PG+G
Sbjct: 78 QGFKEPTSIQAQGWPIALSGSNMVGIAQTGSGKTLAYTLPAIVHINHQ----PYLEPGDG 133
Query: 221 PYGLIICPSRELARQ 235
P LI+ P+RELA+Q
Sbjct: 134 PIALILAPTRELAQQ 148
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQ 67
+++GIA TGSGKTL + LP ++ Q P+L PG+GP LI+ P+RELA+Q +
Sbjct: 99 NMVGIAQTGSGKTLAYTLPAIVHINHQ----PYLEPGDGPIALILAPTRELAQQISSTAK 154
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ I R GG P L I++G++
Sbjct: 155 DFGSSSRI--RNTCVFGGAPKGPQLRDIERGVE 185
>gi|356565647|ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Glycine max]
gi|356565649|ref|XP_003551051.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Glycine max]
Length = 706
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P S+ KL L++A+E G
Sbjct: 248 VDRHW-SEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWNESKLTNELLKAVEKAGY 306
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
K P+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 307 KTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEDNEAEG 362
Query: 221 PYGLIICPSRELARQTHDIIQYYCAALPI 249
PY +++ P+RELA+Q D + L I
Sbjct: 363 PYAVVMAPTRELAQQIEDETVKFAQYLGI 391
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 324 RDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEDNEAEGPYAVVMAPTRELAQQIE 379
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 380 DETVKFAQYLGIKVVSI--VGGQSIEEQGFKIRQG 412
>gi|15232722|ref|NP_187573.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
gi|75337164|sp|Q9SF41.1|RH45_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 45
gi|6682258|gb|AAF23310.1|AC016661_35 putative RNA helicase [Arabidopsis thaliana]
gi|332641267|gb|AEE74788.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
Length = 989
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + V G DVP + L ++ L+ +KP PIQ Q +P +SGRD IG
Sbjct: 379 RKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIG 438
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q + I+ + A
Sbjct: 439 VAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKA 495
Query: 247 LPI 249
L I
Sbjct: 496 LGI 498
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IG+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q +
Sbjct: 432 SGRDCIGVAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIYSD 488
Query: 66 IQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
I+ + AL I C+ + GG + Q + +K+G +
Sbjct: 489 IRKFSKALGI---ICVPVYGGSGVAQQISELKRGTE 521
>gi|312373567|gb|EFR21282.1| hypothetical protein AND_17289 [Anopheles darlingi]
Length = 744
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 131 RILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFT 190
+I ++G +VP F LP ++ L+ +G KPT IQ QG+P ALSGRD++GIA T
Sbjct: 105 QITLKGREVPRPSMDFEDGGLPSYIMEELKRQGFSKPTAIQAQGMPIALSGRDMVGIAQT 164
Query: 191 GSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
GSGKTL +V+P L+ QE+ G+GP LI+ P+RELA+Q +
Sbjct: 165 GSGKTLAYVVPSLVHIQHQES---IRRGDGPIALILAPTRELAQQIQQV 210
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL +V+P L+ QE+ G+GP LI+ P+RELA+Q +
Sbjct: 156 RDMVGIAQTGSGKTLAYVVPSLVHIQHQES---IRRGDGPIALILAPTRELAQQIQQVAT 212
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + TC+ GG P + +++G +
Sbjct: 213 DFGSRVSAN-NTCV-FGGAPKGPQIRDLERGAE 243
>gi|356522085|ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
max]
Length = 701
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P S+ KL L++A+E G
Sbjct: 243 VDRHW-SEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWNESKLTSELLKAVEKAGY 301
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
K P+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 302 KTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEDNEAEG 357
Query: 221 PYGLIICPSRELARQTHDIIQYYCAALPI 249
PY +++ P+RELA+Q D + L I
Sbjct: 358 PYAVVMAPTRELAQQIEDETVKFAQYLGI 386
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 319 RDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEDNEAEGPYAVVMAPTRELAQQIE 374
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 375 DETVKFAQYLGIKVVSI--VGGQSIEEQGFKIRQG 407
>gi|451848387|gb|EMD61693.1| hypothetical protein COCSADRAFT_163118 [Cochliobolus sativus
ND90Pr]
Length = 1132
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 101 YNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALE 160
Y +P++ S P ++V D+ I V+ DDVP + M L ++ +
Sbjct: 454 YTEPLEVSQMTP-------EEVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQATMDVFT 506
Query: 161 AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEG 220
G +KPT IQ Q P +LSGRD+IG+A TGSGKTL F +P++ L+Q P P +G
Sbjct: 507 RVGYQKPTSIQAQAAPISLSGRDLIGVAKTGSGKTLAFGIPMIRHILDQR---PLKPSDG 563
Query: 221 PYGLIICPSRELARQ-THDIIQYYCAA 246
P GLI+ P+REL+ Q H++ + A+
Sbjct: 564 PIGLILAPTRELSLQIVHELKPFLSAS 590
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKTL F +P++ L+Q P P +GP GLI+ P+REL+ Q
Sbjct: 526 SGRDLIGVAKTGSGKTLAFGIPMIRHILDQR---PLKPSDGPIGLILAPTRELSLQIVHE 582
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
++ + +A I ++ A GG P++ + +IK+G
Sbjct: 583 LKPFLSASGITIKC--AYGGQPISDQIAMIKRG 613
>gi|340378427|ref|XP_003387729.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Amphimedon queenslandica]
Length = 1111
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 134 VEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSG 193
V+G D P ++ L ++ ++ G +KPTPIQ Q IPA +SG+D+IGIA TGSG
Sbjct: 426 VKGKDCPKPVKAWSQCGLSSKVMDVIKKNGYEKPTPIQAQAIPAIMSGKDVIGIAKTGSG 485
Query: 194 KTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
KTL F+LP+ L+Q P +GP LI P+RELA Q ++ + +C L +
Sbjct: 486 KTLAFLLPLFRHVLDQPE---IGPEDGPISLIFAPTRELAIQIYNECRKFCKPLKL 538
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ +D+IGIA TGSGKTL F+LP+ L+Q P +GP LI P+RELA Q ++
Sbjct: 472 SGKDVIGIAKTGSGKTLAFLLPLFRHVLDQPE---IGPEDGPISLIFAPTRELAIQIYNE 528
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +C P+ LRT GG +++ + +K+G +
Sbjct: 529 CRKFCK--PLKLRTVCVYGGSGVSEQIADLKRGAE 561
>gi|156554399|ref|XP_001604593.1| PREDICTED: ATP-dependent RNA helicase p62-like [Nasonia
vitripennis]
Length = 551
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 104 PIKTSWRAPRCILS--LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
P K + P +S P +V++ R +I ++GD VP F P+ +++ ++
Sbjct: 84 PFKKDFYTPHPNVSNRHPREVNEF-RETHKITLKGDKVPNPIQFFEEGNFPDYVMQGIKK 142
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
+G +PTPIQ QG P A+SG++++GIA TGSGKTL ++LP ++ Q+ P G+GP
Sbjct: 143 QGYSEPTPIQAQGWPIAMSGKNMVGIAQTGSGKTLAYILPAIVHINSQQ---PLNRGDGP 199
Query: 222 YGLIICPSRELARQTHDI 239
LI+ P+RELA+Q +
Sbjct: 200 IALILAPTRELAQQIQTV 217
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
++++GIA TGSGKTL ++LP ++ Q+ P G+GP LI+ P+RELA+Q +
Sbjct: 163 KNMVGIAQTGSGKTLAYILPAIVHINSQQ---PLNRGDGPIALILAPTRELAQQIQTVAS 219
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +L TC+ GG P +++G++
Sbjct: 220 DF-GSLSYVRNTCI-FGGAPKGGQARDLERGVE 250
>gi|256073063|ref|XP_002572852.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646414|emb|CCD58911.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 769
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/109 (44%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ ++ + G DVP SF + +P+ ++ + G + PTPIQ QG P ALSGRD++G
Sbjct: 75 RKKYKMSLSGRDVPRPVLSFNELNVPDYILSVIAKNGWQLPTPIQSQGWPMALSGRDVVG 134
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
IA TGSGKT F+LP ++ + Q L EGP LI+ P+RELA+Q
Sbjct: 135 IAQTGSGKTASFLLPAVIHIMAQPR---LLRNEGPICLILVPTRELAQQ 180
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKT F+LP ++ + Q L EGP LI+ P+RELA+Q +
Sbjct: 128 SGRDVVGIAQTGSGKTASFLLPAVIHIMAQPR---LLRNEGPICLILVPTRELAQQVLVV 184
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + A LR GG L ++KG
Sbjct: 185 AKEFADA--ASLRAMCFYGGSAKGTQLREMQKG 215
>gi|157128260|ref|XP_001661370.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882257|gb|EAT46482.1| AAEL002351-PA [Aedes aegypti]
Length = 639
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ I +G DVP +F + P + PTPIQ QG P A+SGRD++G
Sbjct: 70 RKTKEITTKGRDVPDPALTFEEVGFPAEIADEWRYAEFTTPTPIQSQGWPIAMSGRDMVG 129
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL ++LP LM ++Q+++L G+GP LI+ P+RELA+Q + + A
Sbjct: 130 IAKTGSGKTLSYLLPALMH-IDQQSRL--RRGDGPIALILAPTRELAQQIKQVTDDFGRA 186
Query: 247 LPIGS 251
+ I +
Sbjct: 187 MKIKN 191
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++LP LM ++Q+++L G+GP LI+ P+RELA+Q +
Sbjct: 125 RDMVGIAKTGSGKTLSYLLPALMH-IDQQSRL--RRGDGPIALILAPTRELAQQIKQVTD 181
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TCL GG Q D +K G++
Sbjct: 182 DFGRAMKIK-NTCLFGGGAKRQQG-DDLKYGVE 212
>gi|221504668|gb|EEE30341.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 522
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 73/126 (57%), Gaps = 10/126 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G VPP ++ LP L+ A++ +PTPIQ+Q IP AL RD+
Sbjct: 82 IFREDFEIYIKGGRVPPPIRTWAESALPWELIEAVKHANYDRPTPIQMQAIPIALEQRDL 141
Query: 185 IGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
IGIA TGSGKT FVLP+L + L ++T +GPY LI+ PSRELA Q +
Sbjct: 142 IGIAETGSGKTAAFVLPMLTYVKGLPPLNEDT-----GQDGPYALILAPSRELALQIDEE 196
Query: 240 IQYYCA 245
Q + +
Sbjct: 197 TQKFAS 202
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 10/70 (14%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFC-----LEQETKLPFLPGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKT FVLP+L + L ++T +GPY LI+ PSRELA Q
Sbjct: 138 QRDLIGIAETGSGKTAAFVLPMLTYVKGLPPLNEDT-----GQDGPYALILAPSRELALQ 192
Query: 62 THDIIQYYCA 71
+ Q + +
Sbjct: 193 IDEETQKFAS 202
>gi|302847755|ref|XP_002955411.1| DEAD-box RNA helicase, ATP-dependent [Volvox carteri f.
nagariensis]
gi|300259253|gb|EFJ43482.1| DEAD-box RNA helicase, ATP-dependent [Volvox carteri f.
nagariensis]
Length = 535
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ +I V GD VP SF PE ++ + G K+PTPIQ QG P AL GRD
Sbjct: 93 EAFRRSKQIHVYGDGVPKPVTSFEEASFPEYVLAEVIRAGFKEPTPIQCQGWPMALLGRD 152
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
+IG+A TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q Q
Sbjct: 153 LIGLAETGSGKTLAYLLPAVVHINAQ----PYLQPGDGPIVLVLAPTRELAVQIQQECQR 208
Query: 243 YCAALPI 249
+ ++ I
Sbjct: 209 FGSSSRI 215
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IG+A TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 151 RDLIGLAETGSGKTLAYLLPAVVHINAQ----PYLQPGDGPIVLVLAPTRELAVQIQQEC 206
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q + ++ I + + GG P ++ G++
Sbjct: 207 QRFGSSSRI--KNTVVYGGAPKGPQARDLRSGVE 238
>gi|367042554|ref|XP_003651657.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
gi|346998919|gb|AEO65321.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
Length = 1193
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 4/152 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I+ N K W P+ + + ++ +R L I V G +VP + L ++
Sbjct: 514 IELNPIRKNFWVEPQELSQMTEEEAADLRLELDGIKVSGKNVPRPVQKWSQCGLTRPILD 573
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
+E G +KPTPIQ+Q +P +SGRD+IG+A TGSGKT+ FVLP+L +Q+ P
Sbjct: 574 TIEGLGYEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKDQD---PVSG 630
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
+GP GLI+ P+REL Q + + + AL +
Sbjct: 631 DDGPIGLIMTPTRELCTQIYSDLLPFTKALKL 662
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ FVLP+L +Q+ P +GP GLI+ P+REL Q +
Sbjct: 596 SGRDVIGVAKTGSGKTMAFVLPMLRHIKDQD---PVSGDDGPIGLIMTPTRELCTQIYSD 652
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + AL LR A GG + + +K+G + + T R + + +V ++
Sbjct: 653 LLPFTKAL--KLRAVAAYGGNAIKDQIAELKRGAEI--IVATPGRMIDLLAANSGRVTNL 708
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKL-----PE-----------SLVRALEAKGIKKPTP 169
R +L E D + ++MK+ P+ ++ AL K +++P
Sbjct: 709 KRATYIVLDEADRMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRIIDALTKKVLREPVE 768
Query: 170 IQVQG 174
I V G
Sbjct: 769 ITVGG 773
>gi|158294036|ref|XP_315363.4| AGAP005351-PA [Anopheles gambiae str. PEST]
gi|157015378|gb|EAA11336.4| AGAP005351-PA [Anopheles gambiae str. PEST]
Length = 640
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ I +G D+P +F P ++ L G PTPIQ QG P ALSGRD++G
Sbjct: 68 RRSKEITTKGHDIPDPIFTFEESGFPAEIIDELRYAGFTTPTPIQAQGWPIALSGRDMVG 127
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL +++P L+ ++Q+ +L G+GP LI+ P+RELA+Q + + A
Sbjct: 128 IAKTGSGKTLSYLIPALIH-IDQQPRL--RRGDGPIALILAPTRELAQQIKQVADDFGRA 184
Query: 247 L 247
L
Sbjct: 185 L 185
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL +++P L+ ++Q+ +L G+GP LI+ P+RELA+Q +
Sbjct: 121 SGRDMVGIAKTGSGKTLSYLIPALIH-IDQQPRL--RRGDGPIALILAPTRELAQQIKQV 177
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDV 94
+ AL TCL GG Q D+
Sbjct: 178 ADDFGRALKYK-NTCLFGGGKKRKQQDDL 205
>gi|15218071|ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 1166
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + V G DVP + L ++ ++ +KP PIQ Q +P +SGRD IG
Sbjct: 512 RKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIG 571
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q H I+ +
Sbjct: 572 VAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKP 628
Query: 247 LPI 249
L I
Sbjct: 629 LGI 631
Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IG+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q H
Sbjct: 565 SGRDCIGVAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIHSD 621
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + P+ +R GG + Q + +K+G +
Sbjct: 622 IRKF--SKPLGIRCVPVYGGSGVAQQISELKRGTE 654
>gi|76154434|gb|AAX25917.2| SJCHGC05131 protein [Schistosoma japonicum]
Length = 269
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 3/130 (2%)
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
S P+ + R+ ++ + G DVP SF + +P+ ++ + G + PTPIQ QG P
Sbjct: 58 SRPEVEVEAFRKKYKMSLSGRDVPRPVLSFNELSVPDYILSVIAKNGWQLPTPIQSQGWP 117
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 236
ALSGRD++GIA TGSGKT F+LP ++ + Q L EGP L++ P+RELA+Q
Sbjct: 118 MALSGRDVVGIAQTGSGKTATFLLPAVIHIMAQPR---LLRNEGPICLVLVPTRELAQQV 174
Query: 237 HDIIQYYCAA 246
+ + + A
Sbjct: 175 LSVAKEFADA 184
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKT F+LP ++ + Q L EGP L++ P+RELA+Q +
Sbjct: 121 SGRDVVGIAQTGSGKTATFLLPAVIHIMAQPR---LLRNEGPICLVLVPTRELAQQVLSV 177
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + A LR GG L ++KG
Sbjct: 178 AKEFADA--ASLRAICFYGGSAKGTQLREMQKG 208
>gi|452988994|gb|EME88749.1| hypothetical protein MYCFIDRAFT_58038 [Pseudocercospora fijiensis
CIRAD86]
Length = 481
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ +I V+G DVP +F P ++ ++ +G KPT IQ QG P ALSGRD++G
Sbjct: 44 RRDNQITVQGKDVPKPVETFDEAGFPNYVMNEVKQQGFAKPTAIQSQGWPMALSGRDVVG 103
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q + + +
Sbjct: 104 IAETGSGKTLTYTLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQEEVSKFGK 159
Query: 246 ALPI 249
+ I
Sbjct: 160 SSRI 163
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q + +
Sbjct: 99 RDVVGIAETGSGKTLTYTLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQEEV 154
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 155 SKFGKSSRI--RNTCVYGGVPKGGQIRDLARGVE 186
>gi|401410444|ref|XP_003884670.1| hypothetical protein NCLIV_050680 [Neospora caninum Liverpool]
gi|325119088|emb|CBZ54640.1| hypothetical protein NCLIV_050680 [Neospora caninum Liverpool]
Length = 578
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 114 CILSLPDQVHDIIRR-NLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ S+ + D IRR N +V G +VP +F P ++ + G +KPT IQV
Sbjct: 96 AVASMSTEEADRIRRANEITIVHGHNVPKPVPTFEYTSFPSYILDVINQTGFQKPTAIQV 155
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRE 231
QG P ALSGRD+IGIA TGSGKTL F+LP ++ Q P+L G+GP LI+ P+RE
Sbjct: 156 QGWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQ----PYLSKGDGPIVLILAPTRE 211
Query: 232 LARQTHDIIQYYCAALPI 249
L Q + + A+ I
Sbjct: 212 LVEQIRTQCRTFAASSKI 229
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD+IGIA TGSGKTL F+LP ++ Q P+L G+GP LI+ P+REL Q
Sbjct: 163 SGRDMIGIAETGSGKTLAFLLPAIVHINAQ----PYLSKGDGPIVLILAPTRELVEQIRT 218
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A+ I +A GGVP + +++G +
Sbjct: 219 QCRTFAASSKI--HHAVAYGGVPKRPQIMELERGAE 252
>gi|409082396|gb|EKM82754.1| hypothetical protein AGABI1DRAFT_104628 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 747
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 8/137 (5%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
++ + ++ I R + I G ++P S+R ++PES++ ++ G K+P+PIQ Q
Sbjct: 291 LVEMKERDWRIFREDFSISARGGNIPHPLRSWRESQIPESILECIDRIGYKEPSPIQRQA 350
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSR 230
IP L RDIIGIA TGSGKT FV+P+L F LP + GPY LI+ P+R
Sbjct: 351 IPIGLQNRDIIGIAETGSGKTAAFVIPMLAFI----GNLPLFTDDNRHLGPYSLILAPTR 406
Query: 231 ELARQTHDIIQYYCAAL 247
ELA+Q + + L
Sbjct: 407 ELAQQIESEARKFAGPL 423
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 31/154 (20%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQT 62
+RDIIGIA TGSGKT FV+P+L F LP + GPY LI+ P+RELA+Q
Sbjct: 357 NRDIIGIAETGSGKTAAFVIPMLAFI----GNLPLFTDDNRHLGPYSLILAPTRELAQQI 412
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQV 122
+ + P+ + +GG + + +++G + +++ P ++
Sbjct: 413 ESEARKFAG--PLGYKCVSIVGGRAVEEQQFNLREGAE-------------IVIATPGRL 457
Query: 123 HDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
D+I R++ +L + C + +M + +V
Sbjct: 458 KDVIERHVLVLSQ--------CRYVVMDEADRMV 483
>gi|389749883|gb|EIM91054.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 487
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ + D+ + RR I V+G +VP SF + PE L+ +++A+G PT IQ Q
Sbjct: 32 VTARSDREIEEFRRTKEIKVQGRNVPRPVTSFEEVGFPEYLMTSIKAQGFPAPTSIQCQA 91
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELA 233
P ALSGRD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RELA
Sbjct: 92 WPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLSPGDGPIALVLAPTRELA 147
Query: 234 RQTHDIIQYYCAALPIGS 251
Q IQ C S
Sbjct: 148 VQ----IQQECTKFGSNS 161
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 97 SGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLSPGDGPIALVLAPTRELAVQ--- 149
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C +R GG P + +++G++
Sbjct: 150 -IQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVE 186
>gi|426200230|gb|EKV50154.1| hypothetical protein AGABI2DRAFT_216556, partial [Agaricus bisporus
var. bisporus H97]
Length = 747
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 8/137 (5%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
++ + ++ I R + I G ++P S+R ++PES++ ++ G K+P+PIQ Q
Sbjct: 291 LVEMKERDWRIFREDFSISARGGNIPHPLRSWRESQIPESILECIDRIGYKEPSPIQRQA 350
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSR 230
IP L RDIIGIA TGSGKT FV+P+L F LP + GPY LI+ P+R
Sbjct: 351 IPIGLQNRDIIGIAETGSGKTAAFVIPMLAFI----GNLPLFTDDNRHLGPYSLILAPTR 406
Query: 231 ELARQTHDIIQYYCAAL 247
ELA+Q + + L
Sbjct: 407 ELAQQIESEARKFAGPL 423
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 31/154 (20%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQT 62
+RDIIGIA TGSGKT FV+P+L F LP + GPY LI+ P+RELA+Q
Sbjct: 357 NRDIIGIAETGSGKTAAFVIPMLAFI----GNLPLFTDDNRHLGPYSLILAPTRELAQQI 412
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQV 122
+ + P+ + +GG + + +++G + +++ P ++
Sbjct: 413 ESEARKFAG--PLGYKCVSIVGGRAVEEQQFNLREGAE-------------IVIATPGRL 457
Query: 123 HDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
D+I R++ +L + C + +M + +V
Sbjct: 458 KDVIERHVLVL--------SQCRYVVMDEADRMV 483
>gi|346322147|gb|EGX91746.1| DEAD/DEAH box RNA helicase [Cordyceps militaris CM01]
Length = 1216
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/149 (39%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 91 SLDVIKKGIQYNDPI-KTSWRAPRCILSLPD-QVHDIIRRNLRILVEGDDVPPACCSFRL 148
++D K IQ PI K W P + L + +V D+ I V G DVP +
Sbjct: 528 TVDYSKIDIQ---PIRKNFWAEPVELSELNEAEVADLRVELDGIKVNGKDVPKPVQKWSQ 584
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
L ++ +++ G +KPT IQ+Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +
Sbjct: 585 CGLTRQMLDVIDSMGFEKPTSIQMQAIPALMSGRDVIGVAKTGSGKTMAFLLPMFRHIKD 644
Query: 209 QETKLPFLPGEGPYGLIICPSRELARQTH 237
Q P +GP GLI+ P+RELA Q H
Sbjct: 645 QP---PLKESDGPIGLIMSPTRELATQIH 670
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P +GP GLI+ P+RELA Q H
Sbjct: 616 SGRDVIGVAKTGSGKTMAFLLPMFRHIKDQP---PLKESDGPIGLIMSPTRELATQIHRD 672
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + I R A GG P+ + + +K+G +
Sbjct: 673 CKPFLKMMGI--RAVCAYGGAPIREQIAELKRGAE 705
>gi|326430393|gb|EGD75963.1| vasa [Salpingoeca sp. ATCC 50818]
Length = 873
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+RR L + G VP C SF + +++ ++ +G +PTPIQ Q +P +SGRD+I
Sbjct: 276 LRRQLGVEATGSGVPKPCVSFAYFGFDDVMMQLIQRQGFAQPTPIQAQAVPTVMSGRDVI 335
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYY 243
GIA TGSGKT FV P++ L+Q P L G+GP +++ P+REL Q + Y
Sbjct: 336 GIAETGSGKTAAFVWPMIKHILDQ----PDLKRGDGPIAVLLAPTRELCMQISQNTRRY 390
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQ 61
T + RD+IGIA TGSGKT FV P++ L+Q P L G+GP +++ P+REL Q
Sbjct: 327 TVMSGRDVIGIAETGSGKTAAFVWPMIKHILDQ----PDLKRGDGPIAVLLAPTRELCMQ 382
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y I R GG + + +K G +
Sbjct: 383 ISQNTRRYAKHYNI--RVATVYGGGSRYEQVKTLKDGCE 419
>gi|294909743|ref|XP_002777840.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239885802|gb|EER09635.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 625
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 97 KGIQYNDPIKTSWRA------PRCILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLM 149
K +Q+ + T ++ PR P++V +++RR L I ++ G DVP F
Sbjct: 124 KAVQWENYTLTEFQKHFYVEHPRVAAMTPEEV-ELVRRKLDIEIIHGVDVPNPITHFEEA 182
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
LP+ ++ ++ G PTPIQVQG P AL GRD++GIA TGSGKTL F+LP ++ Q
Sbjct: 183 CLPDYIMVEIQKAGFVNPTPIQVQGWPVALCGRDMVGIAETGSGKTLAFLLPAVVHINAQ 242
Query: 210 ETKLPFL-PGEGPYGLIICPSRELARQ 235
P+L G+GP L++ P+RELA Q
Sbjct: 243 ----PYLQKGDGPIVLVLAPTRELALQ 265
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q +
Sbjct: 215 RDMVGIAETGSGKTLAFLLPAVVHINAQ----PYLQKGDGPIVLVLAPTRELALQIKEEC 270
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ I C GGVP +++ G++
Sbjct: 271 DRFGSSSRISNTCCY--GGVPRGPQARMLQNGVE 302
>gi|298401389|gb|ADI82014.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401391|gb|ADI82015.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401393|gb|ADI82016.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401395|gb|ADI82017.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401397|gb|ADI82018.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401399|gb|ADI82019.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401401|gb|ADI82020.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401403|gb|ADI82021.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401405|gb|ADI82022.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401407|gb|ADI82023.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401409|gb|ADI82024.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401411|gb|ADI82025.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401413|gb|ADI82026.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401415|gb|ADI82027.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401417|gb|ADI82028.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401419|gb|ADI82029.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401421|gb|ADI82030.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401423|gb|ADI82031.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401425|gb|ADI82032.1| dead box polypeptide 5 [Heliconius heurippa]
gi|298401427|gb|ADI82033.1| dead box polypeptide 5 [Heliconius heurippa]
Length = 238
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 136 GDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKT 195
G+DVP F P+ ++ ++ +G ++PT IQ QG P ALSGRD++GIA TGSGKT
Sbjct: 2 GNDVPRPNQVFDEGNFPDHIMNTIKEQGWEEPTGIQAQGWPIALSGRDMVGIASTGSGKT 61
Query: 196 LVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
L ++LP + + Q+ G+GP LI+ P+RELA+Q + Q Y A
Sbjct: 62 LAYILPAAVHIVHQQR---IQRGDGPIALILAPTRELAQQIQSVAQAYSA 108
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP + + Q+ G+GP LI+ P+RELA+Q +
Sbjct: 46 SGRDMVGIASTGSGKTLAYILPAAVHIVHQQR---IQRGDGPIALILAPTRELAQQIQSV 102
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q Y A I TCL GG P +++G++
Sbjct: 103 AQAYSAHGCI-RNTCL-FGGSPKGPQARDLERGVE 135
>gi|451998973|gb|EMD91436.1| hypothetical protein COCHEDRAFT_1101623 [Cochliobolus
heterostrophus C5]
Length = 1058
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 101 YNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALE 160
Y +P++ S P ++V D+ I V+ DDVP + M L ++ +
Sbjct: 380 YTEPLEVSQMTP-------EEVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQATMDVFT 432
Query: 161 AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEG 220
G +KPT IQ Q P +LSGRD+IG+A TGSGKTL F +P++ L+Q P P +G
Sbjct: 433 RVGYQKPTSIQAQAAPISLSGRDLIGVAKTGSGKTLAFGIPMIRHILDQR---PLKPSDG 489
Query: 221 PYGLIICPSRELARQ-THDIIQYYCAA 246
P GLI+ P+REL+ Q H++ + A+
Sbjct: 490 PIGLILAPTRELSLQIVHELKPFLSAS 516
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKTL F +P++ L+Q P P +GP GLI+ P+REL+ Q
Sbjct: 452 SGRDLIGVAKTGSGKTLAFGIPMIRHILDQR---PLKPSDGPIGLILAPTRELSLQIVHE 508
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
++ + +A I ++ A GG P++ + +IK+G
Sbjct: 509 LKPFLSASGITIKC--AYGGQPISDQIAMIKRG 539
>gi|356505639|ref|XP_003521597.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 782
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/138 (41%), Positives = 77/138 (55%), Gaps = 5/138 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I Y K + I + +Q R++L I V G DVP +F ++ A
Sbjct: 192 IDYEPFTKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKPIKAFEDCGFSSQIMNA 251
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
++ +G +KPT IQ Q +P LSGRDIIGIA TGSGKT FVLP+++ ++Q P L
Sbjct: 252 IKKQGYEKPTTIQCQALPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQ----PELQK 307
Query: 219 -EGPYGLIICPSRELARQ 235
EGP G+I P+RELA Q
Sbjct: 308 EEGPIGVICAPTRELAHQ 325
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q
Sbjct: 273 SGRDIIGIAKTGSGKTASFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRELAHQIFL 328
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A + R GG+ + +K G +
Sbjct: 329 EAKKFAKAYGV--RVSAVYGGMSKLEQFKELKAGCE 362
>gi|299749479|ref|XP_002911384.1| RNA helicase [Coprinopsis cinerea okayama7#130]
gi|298408458|gb|EFI27890.1| RNA helicase [Coprinopsis cinerea okayama7#130]
Length = 425
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
I ++ ++ + RR+ I V+G +VP SF PE L+ + A+G PTPIQ Q
Sbjct: 79 ITAMSEREVEEFRRSKDIRVQGRNVPRPIRSFDECGFPEYLMSTIRAQGFDAPTPIQCQA 138
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELA 233
P ALSGRD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RELA
Sbjct: 139 WPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALVLAPTRELA 194
Query: 234 RQTHDIIQYYCAAL 247
Q IQ C+
Sbjct: 195 VQ----IQQECSKF 204
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 144 SGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALVLAPTRELAVQ--- 196
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C+ +R GG P + +++G++
Sbjct: 197 -IQQECSKFGGNSRIRNTAIYGGAPKGPQIRDLQRGVE 233
>gi|449455778|ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
sativus]
Length = 715
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P S+ KL L++A+E G
Sbjct: 257 VDRHW-SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESKLTTELLKAVERAGY 315
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
K P+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 316 KSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYI----TRLPPINEENEAEG 371
Query: 221 PYGLIICPSRELARQTHD 238
PY +++ P+RELA+Q D
Sbjct: 372 PYAVVMAPTRELAQQIED 389
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 333 RDVIGIAETGSGKTAAFVLPMLAYI----TRLPPINEENEAEGPYAVVMAPTRELAQQIE 388
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 389 DETVKFSHYLGIKVVSI--VGGQSIEEQGFKIRQG 421
>gi|396490503|ref|XP_003843351.1| hypothetical protein LEMA_P074610.1 [Leptosphaeria maculans JN3]
gi|312219930|emb|CBX99872.1| hypothetical protein LEMA_P074610.1 [Leptosphaeria maculans JN3]
Length = 1226
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K+ ++ + + D + R+ ++ V+G ++P +F P ++ ++A+G
Sbjct: 779 KSFYKEDPAVTARSDAEVEAYRKEHQMTVQGKNIPKPVTTFDEAGFPSYVMNEVKAQGFA 838
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
KPT IQ QG P ALSGRD++G+A TGSGKTL + LP ++ Q P L PG+GP L
Sbjct: 839 KPTAIQAQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVL 894
Query: 225 IICPSRELARQTHDIIQYY 243
I+ P+RELA Q I +
Sbjct: 895 ILAPTRELAVQIQQEISKF 913
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 853 SGRDVVGVAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQ 908
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 909 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLARGVE 942
>gi|449484526|ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Cucumis sativus]
Length = 715
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P S+ KL L++A+E G
Sbjct: 257 VDRHW-SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESKLTTELLKAVERAGY 315
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
K P+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 316 KSPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYI----TRLPPINEENEAEG 371
Query: 221 PYGLIICPSRELARQTHD 238
PY +++ P+RELA+Q D
Sbjct: 372 PYAVVMAPTRELAQQIED 389
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 333 RDVIGIAETGSGKTAAFVLPMLAYI----TRLPPINEENEAEGPYAVVMAPTRELAQQIE 388
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 389 DETVKFSHYLGIKVVSI--VGGQSIEEQGFKIRQG 421
>gi|358379845|gb|EHK17524.1| hypothetical protein TRIVIDRAFT_112589, partial [Trichoderma virens
Gv29-8]
Length = 1252
Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V G DVP + L + + + G +KPTPIQ+Q +PA +SGRD++G+A TG
Sbjct: 612 IKVNGKDVPKPVQKWAQCGLTRQTLDVIGSLGFEKPTPIQMQALPALMSGRDVVGVAKTG 671
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
SGKT+ F+LP+ +QE P +GP GLI+ P+RELA Q H
Sbjct: 672 SGKTMAFLLPMFRHIKDQE---PLKDTDGPIGLIMTPTRELATQIH 714
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++G+A TGSGKT+ F+LP+ +QE P +GP GLI+ P+RELA Q H
Sbjct: 660 SGRDVVGVAKTGSGKTMAFLLPMFRHIKDQE---PLKDTDGPIGLIMTPTRELATQIHRD 716
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + LR A GG P+ + +K+G +
Sbjct: 717 CKPFLKMM--NLRAVCAYGGAPIRDQIAELKRGAE 749
>gi|330796382|ref|XP_003286246.1| hypothetical protein DICPUDRAFT_54136 [Dictyostelium purpureum]
gi|325083751|gb|EGC37195.1| hypothetical protein DICPUDRAFT_54136 [Dictyostelium purpureum]
Length = 630
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 107 TSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKK 166
T W + + + + + I + + I +G VP S++ LP ++ A+ G +K
Sbjct: 174 THW-SKKQLRDMTKRDWHIFKEDFNISTKGGVVPNPIRSWQESSLPRQVLDAVRHLGYEK 232
Query: 167 PTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLII 226
P+PIQ+Q IP ++SGRDI+GIA TGSGKT FV+P+ ++ +Q EGPY +++
Sbjct: 233 PSPIQMQSIPVSVSGRDILGIAETGSGKTCAFVIPMCIYISKQPRLTKETEAEGPYAVVM 292
Query: 227 CPSRELARQ----THDIIQYY 243
P+REL +Q T + Q+Y
Sbjct: 293 APTRELVQQIEKETRNFAQFY 313
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ----TH 63
RDI+GIA TGSGKT FV+P+ ++ +Q EGPY +++ P+REL +Q T
Sbjct: 248 RDILGIAETGSGKTCAFVIPMCIYISKQPRLTKETEAEGPYAVVMAPTRELVQQIEKETR 307
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ Q+Y R +GG P+ + + KG
Sbjct: 308 NFAQFYG------FRVVSLVGGQPIEEQAYQLGKG 336
>gi|255081552|ref|XP_002507998.1| predicted protein [Micromonas sp. RCC299]
gi|226523274|gb|ACO69256.1| predicted protein [Micromonas sp. RCC299]
Length = 481
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 107 TSWRAPRCILSLPDQVHDIIRRNLRILVE----GDDVPPACCSFRLMKLPESLVRALEAK 162
+W+ + +L + IRR + + VE D+ PP SF M L ++ ++ K
Sbjct: 7 ANWKPSERVQALSVNQCEEIRRRMDVTVEVPPGTDEAPPPIESFEDMNLDTKIMMDIKYK 66
Query: 163 GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ-ETKLPFLPGEGP 221
KPTPIQ Q IP SGRD++G A TGSGKT F +P++ CL+Q E K G+GP
Sbjct: 67 EFDKPTPIQAQAIPVICSGRDVLGCAETGSGKTAAFSIPMIQHCLQQPEIKR----GDGP 122
Query: 222 YGLIICPSRELARQ 235
+ +++ P+RELA+Q
Sbjct: 123 FAIVMAPTRELAQQ 136
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 25/140 (17%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQ-ETKLPFLPGEGPYGLIICPSRELARQTHD 64
+ RD++G A TGSGKT F +P++ CL+Q E K G+GP+ +++ P+RELA+Q
Sbjct: 84 SGRDVLGCAETGSGKTAAFSIPMIQHCLQQPEIKR----GDGPFAIVMAPTRELAQQIEK 139
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILS---LPDQ 121
+ + + +T + +GG M++ +K G++ C+ + L D
Sbjct: 140 EAKIFSRSSK-GFKTTIVVGGTNMSEQRMDLKNGVEV------------CVATPGRLIDH 186
Query: 122 VH----DIIRRNLRILVEGD 137
+H ++ R +L IL E D
Sbjct: 187 LHQGNTNLARVSLVILDEAD 206
>gi|409046062|gb|EKM55542.1| hypothetical protein PHACADRAFT_173680 [Phanerochaete carnosa
HHB-10118-sp]
Length = 668
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G +P S+ +P+ L+ +E G K+P+PIQ Q IP L RDI
Sbjct: 222 IFREDFSIASRGGQIPHPLRSWTESDIPQLLLDVIERIGYKEPSPIQRQAIPIGLQNRDI 281
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FV+P+L F +KLP E GPY LI+ P+RELA+Q
Sbjct: 282 IGIAETGSGKTAAFVIPMLSFI----SKLPLFTDENRHLGPYSLILAPTRELAQQIESET 337
Query: 241 QYYCAAL 247
+ + +L
Sbjct: 338 KKFAGSL 344
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 25/135 (18%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQ 61
+RDIIGIA TGSGKT FV+P+L F +KLP E GPY LI+ P+RELA+Q
Sbjct: 277 QNRDIIGIAETGSGKTAAFVIPMLSFI----SKLPLFTDENRHLGPYSLILAPTRELAQQ 332
Query: 62 THDIIQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPD 120
+ + +L TC++I GG + + ++ G + I++ P
Sbjct: 333 IESETKKFAGSLGF---TCVSIVGGRAVEEQQFNLRAGAE-------------IIIATPG 376
Query: 121 QVHDIIRRNLRILVE 135
++ D+I R++ +L +
Sbjct: 377 RLKDVIERHVIVLSQ 391
>gi|389584149|dbj|GAB66882.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium cynomolgi
strain B]
Length = 1104
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 72/125 (57%), Gaps = 8/125 (6%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I ++G VP + L L++A++ +KPTPIQ+Q IP
Sbjct: 650 MTDRDWRIFREDNEIYIKGGIVPAPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPI 709
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELA 233
AL RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA
Sbjct: 710 ALEMRDLIGIAETGSGKTAAFVLPMLAYV----KQLPPLTYETSQDGPYALIIAPSRELA 765
Query: 234 RQTHD 238
Q D
Sbjct: 766 IQIFD 770
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 29/133 (21%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA Q
Sbjct: 714 RDLIGIAETGSGKTAAFVLPMLAYV----KQLPPLTYETSQDGPYALIIAPSRELAIQIF 769
Query: 64 D---IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPD 120
D YC+ RT +GG ++KG++ I+ P
Sbjct: 770 DETNKFASYCSC-----RTVAVVGGRNAEAQAFELRKGVE-------------IIIGTPG 811
Query: 121 QVHDIIRRNLRIL 133
++ D + + +L
Sbjct: 812 RIQDCLEKAYTVL 824
>gi|357620336|gb|EHJ72566.1| DEAD box polypeptide 5 [Danaus plexippus]
Length = 592
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R + V G DVP F P+ +++++ + G +PTPIQ QG P A+SG++++G
Sbjct: 138 RNKHEVSVSGADVPNPIQHFEEGNFPDYVMKSISSMGYNEPTPIQAQGWPIAMSGKNLVG 197
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL ++LP ++ Q+ P G+GP L++ P+RELA+Q + + A
Sbjct: 198 IAQTGSGKTLAYILPAIVHINNQQ---PVRRGDGPVALVLAPTRELAQQIQQVATDFGNA 254
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
++++GIA TGSGKTL ++LP ++ Q+ P G+GP L++ P+RELA+Q +
Sbjct: 193 KNLVGIAQTGSGKTLAYILPAIVHINNQQ---PVRRGDGPVALVLAPTRELAQQIQQVAT 249
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A + R GG P + +++G++
Sbjct: 250 DFGNAAYV--RNTCVFGGAPKREQARDLERGVE 280
>gi|340992734|gb|EGS23289.1| hypothetical protein CTHT_0009560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1198
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I+ N K W P+ + + ++ +R L I V G +VP + L ++
Sbjct: 531 IELNPVRKNFWVEPQELAQMTEEEVAELRMELDGIKVSGKNVPKPVQKWSQCGLTRPILD 590
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
+E G +KPTPIQ+Q +P +SGRD+IG+A TGSGKT+ FVLP+L +Q+ P
Sbjct: 591 TIEKLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKDQD---PVSG 647
Query: 218 GEGPYGLIICPSRELARQTH 237
+GP GLI+ P+REL Q +
Sbjct: 648 DDGPIGLILTPTRELCTQIY 667
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ FVLP+L +Q+ P +GP GLI+ P+REL Q +
Sbjct: 613 SGRDVIGVAKTGSGKTMAFVLPMLRHIKDQD---PVSGDDGPIGLILTPTRELCTQIYTD 669
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG + + +K+G +
Sbjct: 670 LLPFTKVL--KLRAVAAYGGNAIKDQIAELKRGAE 702
>gi|295662382|ref|XP_002791745.1| ATP-dependent RNA helicase DBP2 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279871|gb|EEH35437.1| ATP-dependent RNA helicase DBP2 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 547
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ + Q D RR I V+G +VP +F P+ ++ ++A+G +PT IQ QG
Sbjct: 100 VTARSSQQVDSFRRQHEITVQGKNVPRPVETFDEAGFPQYVMTEVKAQGFARPTAIQSQG 159
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELA 233
P ALSGRD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA
Sbjct: 160 WPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELA 215
Query: 234 RQ 235
Q
Sbjct: 216 VQ 217
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 167 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQTEI 222
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 223 TKFGKSSRI--RNTCVYGGVPKGPQIRDLTRGVE 254
>gi|383847350|ref|XP_003699317.1| PREDICTED: ATP-dependent RNA helicase p62-like [Megachile
rotundata]
Length = 524
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ +I ++G+ +P F P+ +++ + +G +PT IQ QG P A+SG++
Sbjct: 82 DSFRQENQITLKGEKIPNPIQHFEEGNFPDHVMQCIRKQGFSEPTAIQAQGWPIAMSGQN 141
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
++GIA TGSGKTL ++LP L+ Q+ P G+GP LI+ P+RELA+Q D+ +
Sbjct: 142 MVGIAQTGSGKTLGYILPALVHISSQQ---PLNRGDGPIALILVPTRELAQQIQDVAHNF 198
Query: 244 CA 245
+
Sbjct: 199 SS 200
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
++++GIA TGSGKTL ++LP L+ Q+ P G+GP LI+ P+RELA+Q D+
Sbjct: 140 QNMVGIAQTGSGKTLGYILPALVHISSQQ---PLNRGDGPIALILVPTRELAQQIQDVAH 196
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++L TC+ GG P + +++G++
Sbjct: 197 NF-SSLSYAKSTCI-FGGAPKGKQARDLEQGVE 227
>gi|550331|emb|CAA57418.1| putative RNA helicase [Dictyostelium discoideum]
Length = 566
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 5/150 (3%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 157
G Q ++ T W + + + S+ + I + + I +G P +++ LP ++
Sbjct: 100 GKQISELPDTHW-SKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILE 158
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
A+ G +KP+PIQ+Q IP +L+GRDI+GIA TGSGKT FV+P+L++ +Q
Sbjct: 159 AIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTE 218
Query: 218 GEGPYGLIICPSRELARQ----THDIIQYY 243
+GPY L++ P+REL +Q T + Q++
Sbjct: 219 ADGPYALVMAPTRELVQQIEKETRNFAQHF 248
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDI+GIA TGSGKT FV+P+L++ +Q +GPY L++ P+REL +Q +
Sbjct: 183 RDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETR 242
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ A R +GG + + KG
Sbjct: 243 NF--AQHFGFRVVSLVGGQSIEDQAYQVSKG 271
>gi|357626906|gb|EHJ76805.1| DEAD box ATP-dependent RNA helicase-like protein [Danaus plexippus]
Length = 773
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/126 (40%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
D+V + R I V G++VP F P+ ++ + +G ++PT IQ QG P AL
Sbjct: 163 DEVQ-VFRAAKEITVSGNNVPRPNHIFDEGNFPDHIMTTIREQGWEEPTGIQAQGWPIAL 221
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
SGRD++GIA TGSGKTL ++LP + + Q G+GP LI+ P+RELA+Q +
Sbjct: 222 SGRDMVGIASTGSGKTLAYILPAAVHIVHQPR---IQRGDGPIALILAPTRELAQQIQSV 278
Query: 240 IQYYCA 245
Q Y A
Sbjct: 279 AQAYSA 284
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP + + Q G+GP LI+ P+RELA+Q +
Sbjct: 222 SGRDMVGIASTGSGKTLAYILPAAVHIVHQPR---IQRGDGPIALILAPTRELAQQIQSV 278
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q Y A I TCL GG P ++KG++
Sbjct: 279 AQAYSARGFIR-NTCL-FGGSPKGPQARDLEKGVE 311
>gi|326479821|gb|EGE03831.1| ATP-dependent RNA helicase DBP2 [Trichophyton equinum CBS 127.97]
Length = 536
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R+ + V G DVP +F P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 100 EAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQGFAKPTPIQSQGWPMALSGRD 159
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 160 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 208
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 156 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQA 211
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 212 EITKFGKSSRI--RNTCVYGGVPRGPQIRDLTRGVE 245
>gi|315040958|ref|XP_003169856.1| ATP-dependent RNA helicase DBP2 [Arthroderma gypseum CBS 118893]
gi|311345818|gb|EFR05021.1| ATP-dependent RNA helicase DBP2 [Arthroderma gypseum CBS 118893]
Length = 558
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R+ + V G DVP +F P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 121 EAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQGFAKPTPIQSQGWPMALSGRD 180
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 181 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 229
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 179 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQAEI 234
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 235 TKFGKSSRI--RNTCVYGGVPRGPQIRDLTRGVE 266
>gi|209878704|ref|XP_002140793.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556399|gb|EEA06444.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 562
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 115 ILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
I L + + IR++ RI L+ G +VP SF P+ L+ AL G +PT IQVQ
Sbjct: 117 ITKLSEDEANEIRKSKRITLIAGSNVPKPITSFDESSFPDFLIDALYRAGFTEPTAIQVQ 176
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
G P ALSGRD+IGIA TGSGKTL F+LP M + + +L + G+GP LI+ P+REL
Sbjct: 177 GWPVALSGRDMIGIAETGSGKTLGFLLPS-MVHISAQPRLRY--GDGPICLILAPTRELV 233
Query: 234 RQTHDIIQYYCAALPI 249
Q + + L I
Sbjct: 234 EQIREQANRFGNILRI 249
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL F+LP M + + +L + G+GP LI+ P+REL Q +
Sbjct: 185 RDMIGIAETGSGKTLGFLLPS-MVHISAQPRLRY--GDGPICLILAPTRELVEQIREQAN 241
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ L I R GGVP ++ G++
Sbjct: 242 RFGNILRI--RNTAVYGGVPKRSQQISLRNGVE 272
>gi|452839385|gb|EME41324.1| hypothetical protein DOTSEDRAFT_73654 [Dothistroma septosporum
NZE10]
Length = 551
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 6/140 (4%)
Query: 111 APRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPI 170
AP P +V D RR +I ++G DVP +F P ++ ++A+G KPT I
Sbjct: 94 APTVAARSPAEV-DEFRRVNQITIQGRDVPKPVETFDEAGFPNYVMSEVKAQGFPKPTAI 152
Query: 171 QVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPS 229
Q QG P ALSGRD++G+A TGSGKTL + LP ++ Q P L G+GP LI+ P+
Sbjct: 153 QSQGWPMALSGRDVVGVAETGSGKTLTYTLPAIVHINAQ----PLLAQGDGPIVLILAPT 208
Query: 230 RELARQTHDIIQYYCAALPI 249
RELA Q + + + + I
Sbjct: 209 RELAVQIQEEVSKFGKSSRI 228
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q +
Sbjct: 162 SGRDVVGVAETGSGKTLTYTLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQE 217
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + I R GGVP + + +G++
Sbjct: 218 EVSKFGKSSRI--RNTCVYGGVPKGGQIRDLARGVE 251
>gi|168053931|ref|XP_001779387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669185|gb|EDQ55777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
+ Y K + I + ++ R +L I V G DV +F + SL+ A
Sbjct: 189 VDYEKFSKDFYEESDSISGMTEEEVAAYRNSLAIRVSGFDVSRPVKTFEDLGFDASLMGA 248
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-P 217
+ +G ++PTPIQ Q P LSGRD+IGIA TGSGKT FVLP+++ ++Q P L
Sbjct: 249 ISKQGYERPTPIQCQSCPIVLSGRDLIGIAKTGSGKTAAFVLPMMVHIMDQ----PELGK 304
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYC 244
GEGP G+I P+RELA+Q + + +
Sbjct: 305 GEGPIGVICAPTRELAQQIYSEAKKFA 331
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD+IGIA TGSGKT FVLP+++ ++Q P L GEGP G+I P+RELA+Q +
Sbjct: 270 SGRDLIGIAKTGSGKTAAFVLPMMVHIMDQ----PELGKGEGPIGVICAPTRELAQQIYS 325
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + I R GG+ + +K G
Sbjct: 326 EAKKFAKVHGI--RISGVYGGMSKFEQFKELKAG 357
>gi|45709504|gb|AAH67585.1| Ddx5 protein [Danio rerio]
Length = 496
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ I V+G D P F P+ ++ + + PTPIQ QG P ALSG+D++G
Sbjct: 79 RRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVG 138
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q + Y
Sbjct: 139 IAQTGSGKTLSYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQVAAEYGK 194
Query: 246 ALPIGS 251
A I S
Sbjct: 195 ASRIKS 200
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
+D++GIA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 KDMVGIAQTGSGKTLSYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQVA 189
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A I TC+ GG P + +++G++
Sbjct: 190 AEYGKASRIK-STCI-YGGAPKGPQIRDLERGVE 221
>gi|384251995|gb|EIE25472.1| DEAD-box RNA helicase [Coccomyxa subellipsoidea C-169]
Length = 461
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R I ++G D+P +F PE ++ ++ G +PTPIQ QG P AL GRD++G
Sbjct: 26 RHAREIHIDGHDIPKPVTTFEEASFPEYVLTEVKHAGFTQPTPIQAQGWPMALLGRDLVG 85
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCA 245
+A TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q IQ CA
Sbjct: 86 LAETGSGKTLAYLLPAIVHINAQ----PYLEPGDGPIVLVLAPTRELAVQ----IQQECA 137
Query: 246 ALPIGS 251
S
Sbjct: 138 KFGTSS 143
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 13/97 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++G+A TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q I
Sbjct: 81 RDLVGLAETGSGKTLAYLLPAIVHINAQ----PYLEPGDGPIVLVLAPTRELAVQ----I 132
Query: 67 QYYCAALPIPLR---TCLAIGGVPMNQSLDVIKKGIQ 100
Q CA R TC+ GG P + ++ G++
Sbjct: 133 QQECAKFGTSSRIKNTCV-YGGAPKGPQMRDLRNGVE 168
>gi|221056985|ref|XP_002259630.1| snrnp protein [Plasmodium knowlesi strain H]
gi|193809702|emb|CAQ40404.1| snrnp protein, putative [Plasmodium knowlesi strain H]
Length = 1001
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/125 (44%), Positives = 72/125 (57%), Gaps = 8/125 (6%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I ++G VP + L L++A++ +KPTPIQ+Q IP
Sbjct: 550 MTDRDWRIFREDNEIYIKGGIVPAPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPI 609
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELA 233
AL RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA
Sbjct: 610 ALEMRDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALIIAPSRELA 665
Query: 234 RQTHD 238
Q D
Sbjct: 666 IQIFD 670
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 29/133 (21%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + +LP L E GPY LII PSRELA Q
Sbjct: 614 RDLIGIAETGSGKTAAFVLPMLSYV----KQLPPLTYETSQDGPYALIIAPSRELAIQIF 669
Query: 64 D---IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPD 120
D YC+ RT +GG + ++KG++ I+ P
Sbjct: 670 DETNKFASYCSC-----RTVAVVGGRNAEEQAFELRKGVE-------------IIIGTPG 711
Query: 121 QVHDIIRRNLRIL 133
++ D + + +L
Sbjct: 712 RIQDCLEKAYTVL 724
>gi|47086809|ref|NP_997777.1| probable ATP-dependent RNA helicase DDX5 [Danio rerio]
gi|37362204|gb|AAQ91230.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Danio rerio]
Length = 518
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ I V+G D P F P+ ++ + + PTPIQ QG P ALSG+D++G
Sbjct: 79 RRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVG 138
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q + Y
Sbjct: 139 IAQTGSGKTLSYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQVAAEYGK 194
Query: 246 ALPIGS 251
A I S
Sbjct: 195 ASRIKS 200
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ +D++GIA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q
Sbjct: 132 SGKDMVGIAQTGSGKTLSYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQ 187
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y A I TC+ GG P + +++G++
Sbjct: 188 VAAEYGKASRIK-STCI-YGGAPQGPQIRDLERGVE 221
>gi|226289750|gb|EEH45234.1| ATP-dependent RNA helicase DBP2 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR I V+G +VP +F P+ ++ ++A+G +PT IQ QG P ALSGRD
Sbjct: 109 DSFRRQHEITVQGKNVPRPVETFDEAGFPQYVMTEVKAQGFSRPTAIQSQGWPMALSGRD 168
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 169 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 217
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 165 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQT 220
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 221 EITKFGKSSRI--RNTCVYGGVPKGPQIRDLTRGVE 254
>gi|327302680|ref|XP_003236032.1| ATP-dependent RNA helicase DBP2 [Trichophyton rubrum CBS 118892]
gi|326461374|gb|EGD86827.1| ATP-dependent RNA helicase DBP2 [Trichophyton rubrum CBS 118892]
Length = 538
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R+ + V G DVP +F P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 102 EAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQGFAKPTPIQSQGWPMALSGRD 161
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 162 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 158 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQA 213
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 214 EITKFGKSSRI--RNTCVYGGVPRGPQIRDLTRGVE 247
>gi|156375512|ref|XP_001630124.1| predicted protein [Nematostella vectensis]
gi|156217139|gb|EDO38061.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ + V G +VP +F P+ + + +G +PT IQ QG P AL+GR+
Sbjct: 38 DAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQGWPVALTGRN 97
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDI 239
++GIA TGSGKTL F+LP ++ Q P L PG+GP L++CP+RELA+Q ++
Sbjct: 98 LVGIAQTGSGKTLSFILPGIVHINHQ----PLLQPGDGPIVLVLCPTRELAQQVQEV 150
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
R+++GIA TGSGKTL F+LP ++ Q P L PG+GP L++CP+RELA+Q ++
Sbjct: 96 RNLVGIAQTGSGKTLSFILPGIVHINHQ----PLLQPGDGPIVLVLCPTRELAQQVQEVA 151
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y LR+ GG P + +++G++
Sbjct: 152 --YSVGKHCKLRSTCIYGGAPKGPQIRELERGVE 183
>gi|432117756|gb|ELK37909.1| Putative ATP-dependent RNA helicase DDX46 [Myotis davidii]
Length = 1191
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 520 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 578
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I+V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 579 -LAKMSQEEVNVFRLEMEGIIVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQA 637
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 638 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 694
Query: 233 ARQ 235
A Q
Sbjct: 695 ALQ 697
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 645 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 701
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 702 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 734
>gi|298401349|gb|ADI81994.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401351|gb|ADI81995.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401353|gb|ADI81996.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401355|gb|ADI81997.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401357|gb|ADI81998.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401359|gb|ADI81999.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401361|gb|ADI82000.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401363|gb|ADI82001.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401365|gb|ADI82002.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401367|gb|ADI82003.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401369|gb|ADI82004.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401371|gb|ADI82005.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401373|gb|ADI82006.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401375|gb|ADI82007.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401377|gb|ADI82008.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401379|gb|ADI82009.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401381|gb|ADI82010.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401383|gb|ADI82011.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401385|gb|ADI82012.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401387|gb|ADI82013.1| dead box polypeptide 5 [Heliconius melpomene melpomene]
gi|298401429|gb|ADI82034.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401431|gb|ADI82035.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401433|gb|ADI82036.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401435|gb|ADI82037.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401437|gb|ADI82038.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401439|gb|ADI82039.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401441|gb|ADI82040.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401443|gb|ADI82041.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401445|gb|ADI82042.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401447|gb|ADI82043.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401449|gb|ADI82044.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401451|gb|ADI82045.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401453|gb|ADI82046.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401455|gb|ADI82047.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401457|gb|ADI82048.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401459|gb|ADI82049.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401461|gb|ADI82050.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401463|gb|ADI82051.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401465|gb|ADI82052.1| dead box polypeptide 5 [Heliconius cydno cordula]
gi|298401467|gb|ADI82053.1| dead box polypeptide 5 [Heliconius cydno cordula]
Length = 238
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 136 GDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKT 195
G+DVP F P+ ++ ++ +G ++PT IQ QG P ALSGRD++GIA TGSGKT
Sbjct: 2 GNDVPRPNQVFDEGNFPDHIMNTIKEQGWEEPTGIQAQGWPIALSGRDMVGIASTGSGKT 61
Query: 196 LVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCA 245
L ++LP + + Q+ G+GP LI+ P+RELA+Q + Q Y A
Sbjct: 62 LAYMLPAAVHIVHQQR---IQRGDGPIALILAPTRELAQQIQSVAQAYSA 108
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP + + Q+ G+GP LI+ P+RELA+Q +
Sbjct: 46 SGRDMVGIASTGSGKTLAYMLPAAVHIVHQQR---IQRGDGPIALILAPTRELAQQIQSV 102
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q Y A I TCL GG P +++G++
Sbjct: 103 AQAYSAHGCI-RNTCL-FGGSPKGPQARDLERGVE 135
>gi|154271069|ref|XP_001536388.1| hypothetical protein HCAG_08709 [Ajellomyces capsulatus NAm1]
gi|160380608|sp|A6RGE3.1|DBP2_AJECN RecName: Full=ATP-dependent RNA helicase DBP2
gi|150409611|gb|EDN05055.1| hypothetical protein HCAG_08709 [Ajellomyces capsulatus NAm1]
Length = 542
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ I V+G +VP +F P+ ++ ++A+G +PT IQ QG P ALSGRD
Sbjct: 105 DAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRD 164
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 165 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 213
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 163 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQTEI 218
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 219 TKFGKSSRI--RNTCVYGGVPKGPQIRDLTRGVE 250
>gi|449547452|gb|EMD38420.1| hypothetical protein CERSUDRAFT_105018 [Ceriporiopsis subvermispora
B]
Length = 758
Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G +P S++ +P ++ ++ G K+P+PIQ Q IP L RDI
Sbjct: 312 IFREDFSIAARGGQIPHPLRSWKESIIPSEILEVIDKIGYKEPSPIQRQAIPIGLQNRDI 371
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FV+P+L F +KLP E GPY LI+ P+RELA+Q
Sbjct: 372 IGIAETGSGKTAAFVIPMLSFI----SKLPPFTDEIRHLGPYALIMAPTRELAQQIESET 427
Query: 241 QYYCAAL 247
+ + L
Sbjct: 428 KKFAGPL 434
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 25/134 (18%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQT 62
+RDIIGIA TGSGKT FV+P+L F +KLP E GPY LI+ P+RELA+Q
Sbjct: 368 NRDIIGIAETGSGKTAAFVIPMLSFI----SKLPPFTDEIRHLGPYALIMAPTRELAQQI 423
Query: 63 HDIIQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
+ + L TC++I GG + + ++ G + I++ P +
Sbjct: 424 ESETKKFAGPLGF---TCVSIVGGRSVEEQQFNLRSGAE-------------IIIATPGR 467
Query: 122 VHDIIRRNLRILVE 135
+ D+I R++ +L +
Sbjct: 468 LKDVIERHVIVLSQ 481
>gi|225555683|gb|EEH03974.1| ATP-dependent RNA helicase DBP2 [Ajellomyces capsulatus G186AR]
Length = 544
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ I V+G +VP +F P+ ++ ++A+G +PT IQ QG P ALSGRD
Sbjct: 106 DAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRD 165
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 166 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 214
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 164 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQAEI 219
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 220 TKFGKSSRI--RNTCVYGGVPKGPQIRDLTRGVE 251
>gi|357511395|ref|XP_003625986.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355501001|gb|AES82204.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 775
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/118 (44%), Positives = 73/118 (61%), Gaps = 7/118 (5%)
Query: 123 HDII--RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
D+I R++L I V G +VP +F ++ A++ +G +KPT IQ Q +P LS
Sbjct: 208 QDVIDYRKSLAIRVSGFEVPKPVKTFEDCGFAPQIMGAIKKQGYEKPTSIQCQALPVVLS 267
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 237
GRDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 268 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRELAHQIY 321
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 267 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRELAHQIYL 322
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A I R GG+ + +K G +
Sbjct: 323 EAKKFAKAYGI--RVSAVYGGMSKLEQFKELKAGCE 356
>gi|403418136|emb|CCM04836.1| predicted protein [Fibroporia radiculosa]
Length = 1002
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
K + AP + ++ D+ D++R L I + G D P + LP S + ++
Sbjct: 305 KEFYIAPPDVAAMSDEEADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCLDVIKKLNY 364
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGL 224
PTPIQ Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +Q P EGP +
Sbjct: 365 VAPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQR---PLEQMEGPMAV 421
Query: 225 IICPSRELARQTH 237
++ P+RELA Q H
Sbjct: 422 VMTPTRELAVQIH 434
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P EGP +++ P+RELA Q H
Sbjct: 380 SGRDVIGVAKTGSGKTIAFLLPLFRHIKDQR---PLEQMEGPMAVVMTPTRELAVQIHRE 436
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 437 CKPFLRVL--GLRAVCAYGGSPIKDQIAEMKKGAE 469
>gi|325179839|emb|CCA14242.1| Os08g0159900 putative [Albugo laibachii Nc14]
Length = 1173
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/139 (39%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K + PR I L D +R L I V G + P + L +
Sbjct: 526 IEYVPFQKKLYVTPREIKDLADDEVQELRSKLEIKVRGKNCPRPLLKWSQCGFSLRLQQL 585
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
++ G +P IQ Q +PA ++GRD+IGIA TGSGKTL F+LP+ L Q P G
Sbjct: 586 IQKHGYVEPFAIQRQALPAIMAGRDVIGIAKTGSGKTLAFLLPMFRHILHQP---PLKEG 642
Query: 219 EGPYGLIICPSRELARQTH 237
EGP GLI+ P+RELA+Q +
Sbjct: 643 EGPIGLIMAPARELAQQIY 661
Score = 70.5 bits (171), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL F+LP+ L Q P GEGP GLI+ P+RELA+Q + ++
Sbjct: 609 RDVIGIAKTGSGKTLAFLLPMFRHILHQP---PLKEGEGPIGLIMAPARELAQQIY--VE 663
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
A + LR GG +++ + +K+G
Sbjct: 664 AKRFAKDLGLRATAVYGGSSVSEQIGNLKRG 694
>gi|403417986|emb|CCM04686.1| predicted protein [Fibroporia radiculosa]
Length = 755
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ +L D+ + RR + V+G VP SF + PE ++ + A+G PTPIQ Q
Sbjct: 298 VAALSDREVEEFRRTKEMKVQGRSVPRPVSSFDELGFPEYIMSTIRAQGFPAPTPIQCQA 357
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELA 233
P ALSGRD++ IA TGSGKT+ F LP ++ Q P L G+GP LI+ P+RELA
Sbjct: 358 WPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLASGDGPIALILAPTRELA 413
Query: 234 RQTHDIIQYYCAALPIGS 251
Q IQ C S
Sbjct: 414 VQ----IQQECTKFGSNS 427
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L G+GP LI+ P+RELA Q
Sbjct: 363 SGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLASGDGPIALILAPTRELAVQ--- 415
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C +R GG P + +++G++
Sbjct: 416 -IQQECTKFGSNSKIRNTAIYGGAPKGPQIRDLQRGVE 452
>gi|392568072|gb|EIW61246.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 830
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/133 (39%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
K + P I + D+ D++R L I + G D P + LP S + ++ G
Sbjct: 131 KEFYVPPPDIAEMTDEDADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCLEVIKKLGY 190
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGL 224
PTPIQ Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +Q P EGP +
Sbjct: 191 AGPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEQMEGPVAV 247
Query: 225 IICPSRELARQTH 237
I+ P+RELA Q H
Sbjct: 248 IMTPTRELAVQIH 260
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P EGP +I+ P+RELA Q H
Sbjct: 206 SGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEQMEGPVAVIMTPTRELAVQIHRE 262
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 263 CKPFLRVL--NLRAVCAYGGSPIKDQIAEMKKGAE 295
>gi|325091997|gb|EGC45307.1| ATP-dependent RNA helicase DBP2 [Ajellomyces capsulatus H88]
Length = 544
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ I V+G +VP +F P+ ++ ++A+G +PT IQ QG P ALSGRD
Sbjct: 106 DAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRD 165
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 166 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 214
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 164 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQAEI 219
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 220 TKFGKSSRI--RNTCVYGGVPKGPQIRDLTRGVE 251
>gi|294893710|ref|XP_002774608.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239880001|gb|EER06424.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 520
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 75/121 (61%), Gaps = 5/121 (4%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P++V +I R++ +V G +VP +F P+ ++ L G PTPIQ+QG P A
Sbjct: 86 PEEVDNIRRQHDITIVAGRNVPRPVVTFEQAGFPDYILHELAQAGFVAPTPIQIQGWPVA 145
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTH 237
+SGRD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q
Sbjct: 146 MSGRDMVGIAETGSGKTLAFLLPAIVHINAQ----PYLQRGDGPIVLVMAPTRELAVQIQ 201
Query: 238 D 238
+
Sbjct: 202 E 202
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q +
Sbjct: 147 SGRDMVGIAETGSGKTLAFLLPAIVHINAQ----PYLQRGDGPIVLVMAPTRELAVQIQE 202
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I C GGVP + +G++
Sbjct: 203 ECNKFGKSSKIKNTCCY--GGVPRGPQARDLSEGVE 236
>gi|294886917|ref|XP_002771918.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239875718|gb|EER03734.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 521
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 75/121 (61%), Gaps = 5/121 (4%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P++V +I R++ +V G +VP +F P+ ++ L G PTPIQ+QG P A
Sbjct: 91 PEEVDNIRRKHDITIVAGRNVPRPIVTFEQAGFPDYILHELAQAGFVAPTPIQIQGWPVA 150
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTH 237
+SGRD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q
Sbjct: 151 MSGRDMVGIAETGSGKTLAFLLPAIVHINAQ----PYLQRGDGPIVLVMAPTRELAVQIQ 206
Query: 238 D 238
+
Sbjct: 207 E 207
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q +
Sbjct: 152 SGRDMVGIAETGSGKTLAFLLPAIVHINAQ----PYLQRGDGPIVLVMAPTRELAVQIQE 207
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I C GGVP + +G++
Sbjct: 208 ECNKFGKSSKIKNTCCY--GGVPRGPQARDLSEGVE 241
>gi|60501849|gb|AAX22124.1| DEAD-box RNA-dependent helicase p68 [Carassius auratus]
Length = 611
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
S+ D H RR I V+G D P F P ++ + + PTPIQ QG P
Sbjct: 71 SIQDVEH--YRRTKEITVKGRDCPKPIVKFHEANFPNYVMDVIGKQNWTDPTPIQAQGWP 128
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQ 235
ALSG+D++GIA TGSGKTL ++LP ++ Q PFL GEGP L++ P+RELA+Q
Sbjct: 129 VALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQ----PFLERGEGPICLVLAPTRELAQQ 184
Query: 236 THDIIQYYCAALPIGS 251
+ Y A + S
Sbjct: 185 VQQVAAEYGKASRLKS 200
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
+D++GIA TGSGKTL ++LP ++ Q PFL GEGP L++ P+RELA+Q +
Sbjct: 134 KDMVGIAQTGSGKTLSYLLPAIVHINHQ----PFLERGEGPICLVLAPTRELAQQVQQVA 189
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A L++ GG P + +++G++
Sbjct: 190 AEYGKA--SRLKSTCIYGGAPKGPQIRDLERGVE 221
>gi|356522893|ref|XP_003530077.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
20-like [Glycine max]
Length = 523
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ D + R+ I VEG D+P SF PE ++ + G +PTPIQ Q
Sbjct: 54 AVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKAGFTEPTPIQSQ 113
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P AL GRD+IGIA TGSGKTL ++LP + + P L PG+GP L++ P+REL
Sbjct: 114 GWPMALKGRDLIGIAETGSGKTLAYLLP--LSSIVHVNAQPILNPGDGPIVLVLAPTREL 171
Query: 233 ARQTHDIIQYYCAALPIGS 251
A Q + A+ I S
Sbjct: 172 AVQIQQEATKFGASSRIKS 190
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP + + P L PG+GP L++ P+RELA Q
Sbjct: 122 RDLIGIAETGSGKTLAYLLP--LSSIVHVNAQPILNPGDGPIVLVLAPTRELAVQIQQEA 179
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 180 TKFGASSRIK-STCI-YGGVPKGPQVRDLRKGVE 211
>gi|398406623|ref|XP_003854777.1| hypothetical protein MYCGRDRAFT_36977 [Zymoseptoria tritici IPO323]
gi|339474661|gb|EGP89753.1| hypothetical protein MYCGRDRAFT_36977 [Zymoseptoria tritici IPO323]
Length = 529
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ +I ++G DVP +F P ++ ++A+G KPT IQ QG P +LSGRD
Sbjct: 85 DEFRKKAQITIQGRDVPKPVETFDEAGFPNYVMSEVKAQGFDKPTAIQSQGWPMSLSGRD 144
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q + +
Sbjct: 145 VVGVAETGSGKTLTYTLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQEEVSK 200
Query: 243 YCAALPI 249
+ + I
Sbjct: 201 FGKSSRI 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++G+A TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q + +
Sbjct: 143 RDVVGVAETGSGKTLTYTLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQEEV 198
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 199 SKFGKSSRI--RNTCVYGGVPKGGQIRDLSRGVE 230
>gi|189242416|ref|XP_001811064.1| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 1142
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R I+V G+DVP F PE +++ + +G +PT IQ QG P LSGRD
Sbjct: 530 DSFREVKDIIVRGNDVPSPNLCFDEGNFPEYIMQVILKQGFAEPTAIQSQGWPVVLSGRD 589
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
++GIA TGSGKTL ++LP ++ Q+ GEGP LI+ P+RELA+Q + +
Sbjct: 590 LVGIAQTGSGKTLAYMLPAVVHINNQQRP---QRGEGPVALILAPTRELAQQIQKVAHEF 646
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q+ GEGP LI+ P+RELA+Q +
Sbjct: 586 SGRDLVGIAQTGSGKTLAYMLPAVVHINNQQRP---QRGEGPVALILAPTRELAQQIQKV 642
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + TC+ GG P +++G++
Sbjct: 643 AHEF-GSTTMVRNTCI-FGGSPKGPQARDLERGVE 675
>gi|300120116|emb|CBK19670.2| unnamed protein product [Blastocystis hominis]
Length = 607
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
I + D+ D IR R+ + G + P ++ L E ++ + G KP PIQ Q
Sbjct: 17 ITKMTDKEIDDIRDQWRMKIRGRNYPRPVFTWAQCGLTEKILHVINKLGYAKPFPIQSQA 76
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IP +SGR++I +A TGSGKTL ++LP+ L+Q P + G+GP GLI+ P+REL
Sbjct: 77 IPTVMSGREVIAVAKTGSGKTLAYLLPLFRHILDQP---PVVEGDGPIGLILAPARELVA 133
Query: 235 QTHDIIQYYCAALPI 249
Q ++ +C L I
Sbjct: 134 QIYNEASKFCKVLGI 148
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + R++I +A TGSGKTL ++LP+ L+Q P + G+GP GLI+ P+REL Q
Sbjct: 79 TVMSGREVIAVAKTGSGKTLAYLLPLFRHILDQP---PVVEGDGPIGLILAPARELVAQI 135
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
++ +C L I R GG M + ++ +K+G
Sbjct: 136 YNEASKFCKVLGI--RITAVYGGTSMTEQINSLKRG 169
>gi|330923164|ref|XP_003300130.1| hypothetical protein PTT_11286 [Pyrenophora teres f. teres 0-1]
gi|311325925|gb|EFQ91808.1| hypothetical protein PTT_11286 [Pyrenophora teres f. teres 0-1]
Length = 483
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ ++ V+G+++P +F P ++ ++A+G KPT IQ QG P ALSGRD++G
Sbjct: 44 RKEHQMTVKGENIPKPVTTFDEAGFPSYVMNEVKAQGFAKPTAIQAQGWPMALSGRDVVG 103
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCA 245
+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I +
Sbjct: 104 VAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISKFGK 159
Query: 246 ALPI 249
+ I
Sbjct: 160 SSRI 163
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++G+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 99 RDVVGVAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEI 154
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 155 SKFGKSSRI--RNTCVYGGVPKGPQIRDLARGVE 186
>gi|158294546|ref|XP_315671.4| AGAP005652-PA [Anopheles gambiae str. PEST]
gi|157015613|gb|EAA11703.5| AGAP005652-PA [Anopheles gambiae str. PEST]
Length = 728
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 131 RILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFT 190
+I ++G DVP F LP ++ L+ +G KPT IQ QG+P ALSGRD++GIA T
Sbjct: 98 QITLKGRDVPRPSMEFEDGGLPVYIMEELKRQGFAKPTAIQAQGMPIALSGRDMVGIAQT 157
Query: 191 GSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
GSGKTL +V+P L+ Q T G+GP LI+ P+RELA+Q +
Sbjct: 158 GSGKTLAYVVPSLVHIQHQAT---IRRGDGPIALILAPTRELAQQIQQV 203
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL +V+P L+ Q T G+GP LI+ P+RELA+Q +
Sbjct: 147 SGRDMVGIAQTGSGKTLAYVVPSLVHIQHQAT---IRRGDGPIALILAPTRELAQQIQQV 203
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + TC+ GG P + +++G +
Sbjct: 204 ATDFGSRVSAN-NTCV-FGGAPKGPQIRDLERGAE 236
>gi|67539522|ref|XP_663535.1| hypothetical protein AN5931.2 [Aspergillus nidulans FGSC A4]
gi|74657087|sp|Q5B0J9.1|DBP2_EMENI RecName: Full=ATP-dependent RNA helicase dbp2
gi|40738604|gb|EAA57794.1| hypothetical protein AN5931.2 [Aspergillus nidulans FGSC A4]
gi|259479898|tpe|CBF70542.1| TPA: ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B0J9] [Aspergillus
nidulans FGSC A4]
Length = 563
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ + V+G DVP +F P+ ++ ++A+G +KPT IQ QG P ALSGRD
Sbjct: 120 DEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRD 179
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 180 VVGIAETGSGKTLSYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQAEISK 235
Query: 243 YCAALPI 249
+ + I
Sbjct: 236 FGKSSRI 242
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 176 SGRDVVGIAETGSGKTLSYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQA 231
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 232 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 265
>gi|115454875|ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|75320262|sp|Q53RK8.1|RH21_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|62733557|gb|AAX95674.1| DEAD/DEAH box helicase, putative [Oryza sativa Japonica Group]
gi|108710689|gb|ABF98484.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710690|gb|ABF98485.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710691|gb|ABF98486.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113549509|dbj|BAF12952.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|125545447|gb|EAY91586.1| hypothetical protein OsI_13221 [Oryza sativa Indica Group]
gi|125587655|gb|EAZ28319.1| hypothetical protein OsJ_12293 [Oryza sativa Japonica Group]
gi|215697317|dbj|BAG91311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 736
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 89 NQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRL 148
+ D K ++ + W + + + ++ I R + I +G VP +
Sbjct: 261 KKEADAAAKYDAFDMRVDRHW-TQKSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSE 319
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
KL L+RA+E G K+P+PIQ+ IP L RD+IGIA TGSGKT FVLP+L +
Sbjct: 320 SKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI-- 377
Query: 209 QETKLPFL----PGEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
T+LP + EGPY +++ P+RELA+Q + + L I
Sbjct: 378 --TRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFATYLGI 420
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 351 QQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQ 406
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + L I + + +GG + + I++G
Sbjct: 407 IEEETVKFATYLGIKVVSI--VGGQSIEEQGFKIRQG 441
>gi|281207155|gb|EFA81338.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1157
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R L I + G + P ++ LPE + + L+ +KPTPIQ Q IPA +SGR+IIG
Sbjct: 495 RSELGIKITGKNCPKPVLTWAQCGLPEKIHQLLKKNEYEKPTPIQAQTIPAIMSGRNIIG 554
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
IA TGSGKTL F+LP+ L Q+ GEG GLI+ P+RELA Q +
Sbjct: 555 IARTGSGKTLAFLLPMFRHVLSQDRP---KQGEGMVGLIMSPTRELALQIY 602
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ R+IIGIA TGSGKTL F+LP+ L Q+ GEG GLI+ P+RELA Q +
Sbjct: 548 SGRNIIGIARTGSGKTLAFLLPMFRHVLSQDRP---KQGEGMVGLIMSPTRELALQIYSE 604
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + L LR C GG + + + +K+G
Sbjct: 605 CKKFSKVL--GLRVCCVYGGANIGEQIADLKRG 635
>gi|148701846|gb|EDL33793.1| mCG19408 [Mus musculus]
Length = 615
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLKFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ + Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHIIHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ + Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHIIHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|15221998|ref|NP_175911.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
gi|75333448|sp|Q9C718.1|RH20_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 20
gi|12321578|gb|AAG50841.1|AC073944_8 ethylene-responsive RNA helicase, putative [Arabidopsis thaliana]
gi|17065338|gb|AAL32823.1| Unknown protein [Arabidopsis thaliana]
gi|22136216|gb|AAM91186.1| unknown protein [Arabidopsis thaliana]
gi|332195071|gb|AEE33192.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
Length = 501
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 5/137 (3%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ D + R+ I VEG D+P SFR + P+ ++ ++ G +PTPIQ Q
Sbjct: 69 AVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQ 128
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSREL 232
G P A+ GRD+IGIA TGSGKTL ++LP ++ Q P L G+GP L++ P+REL
Sbjct: 129 GWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQ----PMLAHGDGPIVLVLAPTREL 184
Query: 233 ARQTHDIIQYYCAALPI 249
A Q + ++ I
Sbjct: 185 AVQIQQEASKFGSSSKI 201
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L G+GP L++ P+RELA Q
Sbjct: 137 RDLIGIAETGSGKTLSYLLPAIVHVNAQ----PMLAHGDGPIVLVLAPTRELAVQIQQEA 192
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ I TC+ GGVP + ++KG++
Sbjct: 193 SKFGSSSKIKT-TCI-YGGVPKGPQVRDLQKGVE 224
>gi|225456912|ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
vinifera]
Length = 611
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ +Q + R I VEG DVP F+ P + + G +PTPIQ Q
Sbjct: 159 SVQAMSEQEAMLYRARREITVEGYDVPKPIRHFQEANFPGYCLEVIAKLGFVEPTPIQAQ 218
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
G P AL GRD+IGIA TGSGKTL ++LP L+ Q P + GEGP L++ P+RELA
Sbjct: 219 GWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP---PLVRGEGPIVLVLAPTRELA 275
Query: 234 RQTHDIIQYYCAALPIGSF 252
+Q AL GSF
Sbjct: 276 ------VQIQEEALKFGSF 288
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL ++LP L+ Q P + GEGP L++ P+RELA Q +
Sbjct: 227 RDLIGIAETGSGKTLAYLLPALVHVSAQP---PLVRGEGPIVLVLAPTRELAVQIQEEAL 283
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R+ GG P + +++G++
Sbjct: 284 KFGSFTKI--RSTCIYGGAPKGPQIRDLQRGVE 314
>gi|452821200|gb|EME28233.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 1145
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
+ VH+ ++ I + G + P ++ L S++ L +KPT IQ Q IPA +
Sbjct: 409 EDVHEYRKQLGGIRIRGRNCPKPVKTWGQCGLSSSVLDTLRKLRFEKPTAIQAQSIPAIM 468
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
+GRD+IGIA TGSGKTL +VLP+L Q P G+GP GLI+ P+RELA Q +
Sbjct: 469 NGRDVIGIAKTGSGKTLAYVLPMLRHIAAQP---PLQIGDGPIGLIVAPTRELAIQIYGE 525
Query: 240 IQYYCAALPI 249
I+ + AL I
Sbjct: 526 IKRFAKALDI 535
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
N RD+IGIA TGSGKTL +VLP+L Q P G+GP GLI+ P+RELA Q +
Sbjct: 469 NGRDVIGIAKTGSGKTLAYVLPMLRHIAAQP---PLQIGDGPIGLIVAPTRELAIQIYGE 525
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + AL I + A GG + + +K G +
Sbjct: 526 IKRFAKALDI--KVVCAYGGSGIGDQIAKLKVGAE 558
>gi|269861020|ref|XP_002650226.1| DEAD box RNA helicase p68 [Enterocytozoon bieneusi H348]
gi|220066356|gb|EED43841.1| DEAD box RNA helicase p68 [Enterocytozoon bieneusi H348]
Length = 443
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALE-AKGIKKPTPIQVQGIPAALSGR 182
++ R+N + + G ++P SFR + E LV E KG + PTPIQ QG P ALSGR
Sbjct: 7 NLFRKNNEMKLFGTNIPAPVLSFRDLNFSEELVNFFEVTKGWEHPTPIQSQGWPMALSGR 66
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
D+IGIA TGSGKT F++P + +Q + G+GP +++ P+RELA Q ++
Sbjct: 67 DMIGIAATGSGKTFSFLVPAYIHAADQPS---LREGDGPIVIVLAPTRELATQIGNV 120
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
RD+IGIA TGSGKT F++P + +Q + G+GP +++ P+RELA Q ++
Sbjct: 66 RDMIGIAATGSGKTFSFLVPAYIHAADQPS---LREGDGPIVIVLAPTRELATQIGNV 120
>gi|189205174|ref|XP_001938922.1| ATP-dependent RNA helicase dbp2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187986021|gb|EDU51509.1| ATP-dependent RNA helicase dbp2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 573
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 72/118 (61%), Gaps = 5/118 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ ++ V+G+++P +F P ++ ++A+G KPT IQ QG P ALSGRD++G
Sbjct: 112 RKEHQMTVKGENIPKPVTTFDEAGFPSYVMNEVKAQGFAKPTAIQAQGWPMALSGRDVVG 171
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYY 243
+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I +
Sbjct: 172 VAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISKF 225
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++G+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 167 RDVVGVAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEI 222
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 223 SKFGKSSRI--RNTCVYGGVPKGPQIRDLARGVE 254
>gi|297826827|ref|XP_002881296.1| hypothetical protein ARALYDRAFT_902447 [Arabidopsis lyrata subsp.
lyrata]
gi|297327135|gb|EFH57555.1| hypothetical protein ARALYDRAFT_902447 [Arabidopsis lyrata subsp.
lyrata]
Length = 731
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W R + + ++ I R + I +G +P S+ KL L++A+E G
Sbjct: 273 VDRHWSDKR-LEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGY 331
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
KKP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + ++LP + EG
Sbjct: 332 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYI----SRLPPMSEENETEG 387
Query: 221 PYGLIICPSRELARQTHD 238
PY +++ P+RELA+Q +
Sbjct: 388 PYAVVMAPTRELAQQIEE 405
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 349 RDVIGIAETGSGKTAAFVLPMLAYI----SRLPPMSEENETEGPYAVVMAPTRELAQQIE 404
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQ 90
+ + L R +GG + +
Sbjct: 405 EETVKFAHYL--GFRVTSIVGGQSIEE 429
>gi|409048419|gb|EKM57897.1| hypothetical protein PHACADRAFT_251816 [Phanerochaete carnosa
HHB-10118-sp]
Length = 506
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 9/140 (6%)
Query: 113 RCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + D+ + RR + V+G DVP SF + PE L+ + A+G PTPIQ
Sbjct: 55 KRVSARSDREIEDFRRIKEMKVQGRDVPRPVSSFDEVGFPEYLMSTIRAQGFAAPTPIQC 114
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRE 231
Q P ALSG D++ I+ TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RE
Sbjct: 115 QAWPMALSGHDVVAISQTGSGKTIAFALPAMLHINAQ----PLLAPGDGPIALILAPTRE 170
Query: 232 LARQTHDIIQYYCAALPIGS 251
LA Q IQ C S
Sbjct: 171 LAVQ----IQQECTKFGSNS 186
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQ 67
D++ I+ TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q IQ
Sbjct: 125 DVVAISQTGSGKTIAFALPAMLHINAQ----PLLAPGDGPIALILAPTRELAVQ----IQ 176
Query: 68 YYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C +R GG P + +++G++
Sbjct: 177 QECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVE 211
>gi|261188002|ref|XP_002620418.1| ATP-dependent RNA helicase DBP2 [Ajellomyces dermatitidis SLH14081]
gi|239593429|gb|EEQ76010.1| ATP-dependent RNA helicase DBP2 [Ajellomyces dermatitidis SLH14081]
Length = 548
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K+ ++ + Q D R+ + V+G +VP +F P+ ++ ++A+G
Sbjct: 92 KSFYKEHPSVTQRSSQEVDAFRKEQEMTVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFA 151
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
KPT IQ QG P ALSGRD++GIA TGSGKTL + LP ++ Q P L PG+GP L
Sbjct: 152 KPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVL 207
Query: 225 IICPSRELARQ 235
++ P+RELA Q
Sbjct: 208 VLAPTRELAVQ 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 168 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQTEI 223
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 224 TKFGKSSRI--RNTCVYGGVPKGPQIRDLTRGVE 255
>gi|170595924|ref|XP_001902572.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158589680|gb|EDP28579.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 658
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R +L + V G + P +F E+L+ + + PTPIQ Q IPAALSGRD++
Sbjct: 118 LRNSLNLKVAGFNPPKPVTAFAHFGFDEALMNVIRKSEYEHPTPIQAQSIPAALSGRDVL 177
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKT+ ++ P ++ ++Q P L G+GP L+I P+RELA Q + + YC
Sbjct: 178 GIAKTGSGKTVAYLWPAIIHIMDQ----PDLKEGDGPISLVIVPTRELALQVYQEAKRYC 233
Query: 245 AALPIG 250
I
Sbjct: 234 KVYNIN 239
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKT+ ++ P ++ ++Q P L G+GP L+I P+RELA Q +
Sbjct: 174 RDVLGIAKTGSGKTVAYLWPAIIHIMDQ----PDLKEGDGPISLVIVPTRELALQVYQEA 229
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQ 90
+ YC I + C GG Q
Sbjct: 230 KRYCKVYNINV-VCAYGGGNKWEQ 252
>gi|344231977|gb|EGV63856.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 809
Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I Y + ++ P+ SL IR++++ V+G D P + + LP S++
Sbjct: 190 IDYKPFRRVFYKPPKEFESLSSDEITKIRQDIK--VKGVDCPLPITKWSQLGLPLSILSI 247
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ + P+PIQ Q +P +SGRDIIG+A TGSGKTL FVLP++ +Q+ P G
Sbjct: 248 FKTLNYETPSPIQCQALPTIMSGRDIIGVAKTGSGKTLSFVLPMIRHVQDQD---PLQEG 304
Query: 219 EGPYGLIICPSRELARQTHDIIQYYCAAL 247
+GP LI+ P+RELA Q + I + ++
Sbjct: 305 DGPIALILTPTRELAFQVNKEISNFSKSV 333
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RDIIG+A TGSGKTL FVLP++ +Q+ P G+GP LI+ P+RELA Q
Sbjct: 266 TIMSGRDIIGVAKTGSGKTLSFVLPMIRHVQDQD---PLQEGDGPIALILTPTRELAFQV 322
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ I + + + +C GG + + +KKG+Q
Sbjct: 323 NKEISNFSKS----VSSCCCYGGSSIESQIAELKKGVQ 356
>gi|357454677|ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|358344685|ref|XP_003636418.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|124360402|gb|ABN08415.1| Helicase, C-terminal [Medicago truncatula]
gi|355486667|gb|AES67870.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355502353|gb|AES83556.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 499
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R I VEG DVP SF P+ ++ ++ G +PTPIQ QG P AL GRD+IG
Sbjct: 78 RLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIG 137
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q + A
Sbjct: 138 IAETGSGKTLAYLLPAIVHVNAQ----PILDPGDGPIVLVLAPTRELAVQIQQEATKFGA 193
Query: 246 ALPIGS 251
+ I S
Sbjct: 194 SSRIKS 199
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 133 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILDPGDGPIVLVLAPTRELAVQIQQEA 188
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 189 TKFGASSRIK-STCI-YGGVPKGPQVRDLQKGVE 220
>gi|15226155|ref|NP_180929.1| DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana]
gi|75319077|sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|1707017|gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|17473908|gb|AAL38370.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|20259792|gb|AAM13243.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|330253781|gb|AEC08875.1| DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana]
Length = 733
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W R + + ++ I R + I +G +P S+ KL L++A+E G
Sbjct: 275 VDRHWSDKR-LEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGY 333
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
KKP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + ++LP + EG
Sbjct: 334 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYI----SRLPPMSEENETEG 389
Query: 221 PYGLIICPSRELARQTHD 238
PY +++ P+RELA+Q +
Sbjct: 390 PYAVVMAPTRELAQQIEE 407
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 351 RDVIGIAETGSGKTAAFVLPMLAYI----SRLPPMSEENETEGPYAVVMAPTRELAQQIE 406
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQ 90
+ + L R +GG + +
Sbjct: 407 EETVKFAHYL--GFRVTSIVGGQSIEE 431
>gi|302509942|ref|XP_003016931.1| hypothetical protein ARB_05225 [Arthroderma benhamiae CBS 112371]
gi|291180501|gb|EFE36286.1| hypothetical protein ARB_05225 [Arthroderma benhamiae CBS 112371]
Length = 475
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R+ + V G DVP +F P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 100 EAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQGFAKPTPIQSQGWPMALSGRD 159
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 160 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 208
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 156 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQA 211
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 212 EITKFGKSSRI--RNTCVYGGVPRGPQIRDLTRGVE 245
>gi|239615016|gb|EEQ92003.1| ATP-dependent RNA helicase DBP2 [Ajellomyces dermatitidis ER-3]
gi|327357154|gb|EGE86011.1| ATP-dependent RNA helicase DBP2 [Ajellomyces dermatitidis ATCC
18188]
Length = 548
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 5/131 (3%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K+ ++ + Q D R+ + V+G +VP +F P+ ++ ++A+G
Sbjct: 92 KSFYKEHPSVTQRSSQEVDAFRKEQEMTVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFA 151
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
KPT IQ QG P ALSGRD++GIA TGSGKTL + LP ++ Q P L PG+GP L
Sbjct: 152 KPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVL 207
Query: 225 IICPSRELARQ 235
++ P+RELA Q
Sbjct: 208 VLAPTRELAVQ 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 168 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQTEI 223
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 224 TKFGKSSRI--RNTCVYGGVPKGPQIRDLTRGVE 255
>gi|242012227|ref|XP_002426835.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212511048|gb|EEB14097.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 678
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 104 PIKTSWRAP-RCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAK 162
P K ++ P R I + + + R ++ + + G D+P F+ P+ ++ + +
Sbjct: 86 PFKKNFYTPHRDISNRSNNEINQYRNDMAMTIIGKDIPYPITRFQEANFPDYIMNVIRKQ 145
Query: 163 GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPY 222
G PTPIQ QG P ALSG+DI+GIA TGSGKT+ ++LP ++ Q P +GP
Sbjct: 146 GFTVPTPIQAQGWPIALSGKDIVGIAKTGSGKTIAYMLPAIVHIHNQP---PLELNDGPI 202
Query: 223 GLIICPSRELARQTHDIIQYYCAALPI 249
LI+ P+RELA+Q + + A I
Sbjct: 203 ALILAPTRELAQQIQSVANDFGEATRI 229
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
+DI+GIA TGSGKT+ ++LP ++ Q P +GP LI+ P+RELA+Q +
Sbjct: 165 KDIVGIAKTGSGKTIAYMLPAIVHIHNQP---PLELNDGPIALILAPTRELAQQIQSVAN 221
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A I R GG P ++ G++
Sbjct: 222 DFGEATRI--RNSCIFGGAPKGPQFRDLESGVE 252
>gi|392564654|gb|EIW57832.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 494
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 113 RCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + S D+ + RR + V+G D+P SF + P+ ++ + A+G PTPIQ
Sbjct: 30 KRVSSRSDREIEEFRRLKEMKVQGRDIPRPVTSFEEIGFPDYIMSTIRAQGFPSPTPIQC 89
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRE 231
Q P AL+GRD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RE
Sbjct: 90 QAWPMALTGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRE 145
Query: 232 LARQTHDIIQYYCAALPIGS 251
LA Q IQ C S
Sbjct: 146 LAVQ----IQQECTKFGSNS 161
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 99 RDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRELAVQ----I 150
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C +R GG P + +++G++
Sbjct: 151 QQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVE 186
>gi|413955931|gb|AFW88580.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 768
Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 5/140 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y+ K + I + DQ ++L I V G DVP +F P L+ A
Sbjct: 174 IEYDTFTKDFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFEDCGFPVPLMNA 233
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ + +KPT IQ Q +P LSGRDIIGIA TGSGKT FVLP+++ ++Q P L
Sbjct: 234 IAKQAYQKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEK 289
Query: 219 -EGPYGLIICPSRELARQTH 237
EGP G+I P+RELA Q +
Sbjct: 290 EEGPIGVICAPTRELAHQIY 309
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIY- 309
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P LR GGV +K G +
Sbjct: 310 -LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE 344
>gi|326471136|gb|EGD95145.1| ATP-dependent RNA helicase DBP2 [Trichophyton tonsurans CBS 112818]
Length = 350
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R+ + V G DVP +F P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 41 EAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQGFAKPTPIQSQGWPMALSGRD 100
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 101 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 149
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 97 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQA 152
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 153 EITKFGKSSRI--RNTCVYGGVPRGPQIRDLTRGVE 186
>gi|302663759|ref|XP_003023517.1| hypothetical protein TRV_02264 [Trichophyton verrucosum HKI 0517]
gi|291187520|gb|EFE42899.1| hypothetical protein TRV_02264 [Trichophyton verrucosum HKI 0517]
Length = 475
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R+ + V G DVP +F P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 100 EAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQGFAKPTPIQSQGWPMALSGRD 159
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 160 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 208
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 156 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQA 211
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 212 EITKFGKSSRI--RNTCVYGGVPRGPQIRDLTRGVE 245
>gi|195441137|ref|XP_002068383.1| GK13754 [Drosophila willistoni]
gi|194164468|gb|EDW79369.1| GK13754 [Drosophila willistoni]
Length = 839
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y K + I +L D+ +R L + V G P SF + L++A
Sbjct: 256 IEYEPFEKNFYVEHEEISALSDEQVRDLRNTLGVKVSGPSPPKPVTSFGHFGFDDQLIKA 315
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ +PT IQ Q +P AL+GRDIIGIA TGSGKT F+ P+LM ++Q G
Sbjct: 316 VRKAEYTQPTSIQAQAVPCALAGRDIIGIAKTGSGKTAAFIWPLLMHLMDQRE---LKAG 372
Query: 219 EGPYGLIICPSRELARQTHD 238
EGP GLI+ P+REL+ Q ++
Sbjct: 373 EGPIGLILAPTRELSLQIYN 392
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIGIA TGSGKT F+ P+LM ++Q GEGP GLI+ P+REL+ Q ++ +
Sbjct: 339 RDIIGIAKTGSGKTAAFIWPLLMHLMDQRE---LKAGEGPIGLILAPTRELSLQIYNEAK 395
Query: 68 YYCAALPIPLRTCLAIGGVPMNQS 91
+ + + C GG QS
Sbjct: 396 RFGKVYNLRVVCCYG-GGSKWEQS 418
>gi|297733718|emb|CBI14965.3| unnamed protein product [Vitis vinifera]
Length = 611
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ +Q + R I VEG DVP F+ P + + G +PTPIQ Q
Sbjct: 266 SVQAMSEQEAMLYRARREITVEGYDVPKPIRHFQEANFPGYCLEVIAKLGFVEPTPIQAQ 325
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
G P AL GRD+IGIA TGSGKTL ++LP L+ Q P + GEGP L++ P+RELA
Sbjct: 326 GWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP---PLVRGEGPIVLVLAPTRELA 382
Query: 234 RQTHDIIQYYCAALPIGSF 252
+Q AL GSF
Sbjct: 383 ------VQIQEEALKFGSF 395
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
RD+IGIA TGSGKTL ++LP L+ Q P + GEGP L++ P+RELA Q +
Sbjct: 332 KGRDLIGIAETGSGKTLAYLLPALVHVSAQP---PLVRGEGPIVLVLAPTRELAVQIQEE 388
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R+ GG P + +++G++
Sbjct: 389 ALKFGSFTKI--RSTCIYGGAPKGPQIRDLQRGVE 421
>gi|147859772|emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]
Length = 692
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ +Q + R I VEG DVP F+ P + + G +PTPIQ Q
Sbjct: 266 SVQAMSEQEAMLYRARREITVEGYDVPKPIRHFQEANFPGYCLEVIAKLGFVEPTPIQAQ 325
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
G P AL GRD+IGIA TGSGKTL ++LP L+ Q P + GEGP L++ P+RELA
Sbjct: 326 GWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP---PLVRGEGPIVLVLAPTRELA 382
Query: 234 RQTHDIIQYYCAALPIGSF 252
+Q AL GSF
Sbjct: 383 ------VQIQEEALKFGSF 395
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL ++LP L+ Q P + GEGP L++ P+RELA Q +
Sbjct: 334 RDLIGIAETGSGKTLAYLLPALVHVSAQP---PLVRGEGPIVLVLAPTRELAVQIQEEAL 390
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + I R+ GG P + +++G
Sbjct: 391 KFGSFTKI--RSTCIYGGAPKGPQIRDLQRG 419
>gi|258597823|ref|XP_001348611.2| helicase, putative [Plasmodium falciparum 3D7]
gi|255528866|gb|AAN37050.2| helicase, putative [Plasmodium falciparum 3D7]
Length = 527
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 74/116 (63%), Gaps = 5/116 (4%)
Query: 121 QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
+V +I ++ ++EG++VP S + P+ ++++L+ I PTPIQ+QG P ALS
Sbjct: 90 EVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALS 149
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQ 235
G+D+IG A TGSGKTL F+LP + L Q P L G+GP L++ P+RELA Q
Sbjct: 150 GKDMIGKAETGSGKTLAFILPAFVHILAQ----PNLKYGDGPIVLVLAPTRELAEQ 201
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQ-THDI 65
+D+IG A TGSGKTL F+LP + L Q P L G+GP L++ P+RELA Q +
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQ----PNLKYGDGPIVLVLAPTRELAEQIRQEC 206
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I++ + +R A GGVP + + +K+G+
Sbjct: 207 IKFSTES---KIRNTCAYGGVPKSGQIYALKQGVH 238
>gi|226494636|ref|NP_001147596.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
gi|195612416|gb|ACG28038.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
Length = 768
Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 5/140 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y+ K + I + DQ ++L I V G DVP +F P L+ A
Sbjct: 174 IEYDTFTKDFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFEDCGFPVPLMNA 233
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ + +KPT IQ Q +P LSGRDIIGIA TGSGKT FVLP+++ ++Q P L
Sbjct: 234 IAKQAYQKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEK 289
Query: 219 -EGPYGLIICPSRELARQTH 237
EGP G+I P+RELA Q +
Sbjct: 290 EEGPIGVICAPTRELAHQIY 309
Score = 60.8 bits (146), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIY- 309
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P LR GGV +K G +
Sbjct: 310 -LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE 344
>gi|326526777|dbj|BAK00777.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + I + ++ I R + I +G +P ++ KL L+RA+E G
Sbjct: 272 VDRHW-SEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPESKLGTELLRAIEKVGY 330
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
KKP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 331 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEDNEAEG 386
Query: 221 PYGLIICPSRELARQTHDIIQYYCAALPI 249
PY +++ P+RELA+Q + + L I
Sbjct: 387 PYAVVMAPTRELAQQIEEETVKFATYLGI 415
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 346 QQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEDNEAEGPYAVVMAPTRELAQQ 401
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + L I + + +GG + + I++G
Sbjct: 402 IEEETVKFATYLGIKVVSI--VGGQSIEEQGFKIRQG 436
>gi|388508122|gb|AFK42127.1| unknown [Medicago truncatula]
Length = 499
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R I VEG DVP SF P+ ++ ++ G +PTPIQ QG P AL GRD+IG
Sbjct: 78 RLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIG 137
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q + A
Sbjct: 138 IAETGSGKTLAYLLPAIVHVNAQ----PILDPGDGPIVLVLAPTRELAVQIQQEATKFGA 193
Query: 246 ALPIGS 251
+ I S
Sbjct: 194 SSRIKS 199
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 133 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PILDPGDGPIVLVLAPTRELAVQIQQEA 188
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + ++KG++
Sbjct: 189 TKFGASSRIK-STCI-YGGVPKGPQVRDLQKGVE 220
>gi|301612898|ref|XP_002935945.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 1024
Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW-RAPRC 114
EL D ++Y + L+T L + L+ + G I+Y K + P
Sbjct: 257 ELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKLLEPVDHGKIEYESYRKNFYVEVPEL 316
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
++V+ I V+G + P S+ + ++ +L+ +KPTPIQ Q
Sbjct: 317 AKMTTEEVNSYRLELEGITVKGKNCPKPIKSWVQCGISMKILNSLKKHAYEKPTPIQAQA 376
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q P GEGP +I+ P+RELA
Sbjct: 377 IPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEEGEGPIAVIMTPTRELAL 433
Query: 235 Q 235
Q
Sbjct: 434 Q 434
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q P GEGP +I+ P+RELA Q
Sbjct: 382 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEEGEGPIAVIMTPTRELALQITKE 438
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQY---------------NDPIKTSWR 110
+ + L LR GG +++ + +K+G + N + R
Sbjct: 439 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRR 496
Query: 111 APRCILSLPDQVHDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA---KGIK 165
+L D++ D+ + +RI+ D++ P + + + RA+EA + +
Sbjct: 497 VTYVVLDEADRMFDMGFEPQVMRII---DNIRP---DRQTVMFSATFPRAMEALARRILS 550
Query: 166 KPTPIQVQG 174
KP +QV G
Sbjct: 551 KPIEVQVGG 559
>gi|301612896|ref|XP_002935944.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 1049
Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW-RAPRC 114
EL D ++Y + L+T L + L+ + G I+Y K + P
Sbjct: 282 ELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKLLEPVDHGKIEYESYRKNFYVEVPEL 341
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
++V+ I V+G + P S+ + ++ +L+ +KPTPIQ Q
Sbjct: 342 AKMTTEEVNSYRLELEGITVKGKNCPKPIKSWVQCGISMKILNSLKKHAYEKPTPIQAQA 401
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q P GEGP +I+ P+RELA
Sbjct: 402 IPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEEGEGPIAVIMTPTRELAL 458
Query: 235 Q 235
Q
Sbjct: 459 Q 459
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q P GEGP +I+ P+RELA Q
Sbjct: 407 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEEGEGPIAVIMTPTRELALQITKE 463
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQY---------------NDPIKTSWR 110
+ + L LR GG +++ + +K+G + N + R
Sbjct: 464 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRR 521
Query: 111 APRCILSLPDQVHDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA---KGIK 165
+L D++ D+ + +RI+ D++ P + + + RA+EA + +
Sbjct: 522 VTYVVLDEADRMFDMGFEPQVMRII---DNIRP---DRQTVMFSATFPRAMEALARRILS 575
Query: 166 KPTPIQVQG 174
KP +QV G
Sbjct: 576 KPIEVQVGG 584
>gi|145323964|ref|NP_001077571.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|332191920|gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 828
Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + V G DVP + L ++ ++ +KP PIQ Q +P +SGRD IG
Sbjct: 174 RKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIG 233
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q H I+ +
Sbjct: 234 VAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKP 290
Query: 247 LPI 249
L I
Sbjct: 291 LGI 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IG+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q H
Sbjct: 227 SGRDCIGVAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIHSD 283
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + P+ +R GG + Q + +K+G +
Sbjct: 284 IRKF--SKPLGIRCVPVYGGSGVAQQISELKRGTE 316
>gi|146419343|ref|XP_001485634.1| hypothetical protein PGUG_01305 [Meyerozyma guilliermondii ATCC
6260]
Length = 862
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFT 190
I V G D P + + LP S++ LE K G P+PIQ Q +PA +SGRDIIG+A T
Sbjct: 254 IKVRGSDCPMPIQKWAQLGLPSSIMTVLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANT 313
Query: 191 GSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIG 250
GSGKTL FV+P++ ++Q P G+GP G+I+ P+RELA Q + + A+ +
Sbjct: 314 GSGKTLAFVIPLIRHIMDQP---PLKSGDGPIGVILTPTRELALQIQKELVNFTQAVELS 370
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RDIIG+A TGSGKTL FV+P++ ++Q P G+GP G+I+ P+RELA Q +
Sbjct: 305 RDIIGVANTGSGKTLAFVIPLIRHIMDQP---PLKSGDGPIGVILTPTRELALQIQKELV 361
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A + L C GG P+ + +K+G +
Sbjct: 362 NFTQA--VELSVCCCYGGSPIESQIADLKRGTE 392
>gi|126644118|ref|XP_001388195.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117268|gb|EAZ51368.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 586
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
K + + SL ++ D IR+ +I ++ G++VP SF P LV AL G
Sbjct: 129 KNFYHEHESVSSLSNEQVDQIRKERKITIIAGENVPKPITSFVTSGFPNFLVDALYRTGF 188
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYG 223
+PT IQVQG P ALSG D+IGIA TGSGKTL F+LP ++ Q P L G+GP
Sbjct: 189 TEPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAMIHIRAQ----PLLRYGDGPIC 244
Query: 224 LIICPSRELARQ 235
L++ P+REL Q
Sbjct: 245 LVLAPTRELVEQ 256
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
D+IGIA TGSGKTL F+LP ++ Q P L G+GP L++ P+REL Q +
Sbjct: 206 HDMIGIAETGSGKTLGFLLPAMIHIRAQ----PLLRYGDGPICLVLAPTRELVEQIREQA 261
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + LR GGVP I+ G++
Sbjct: 262 NQFGSIF--KLRNTAIYGGVPKRPQQASIRNGVE 293
>gi|310656783|gb|ADP02213.1| putative DEAD-box ATP-dependent RNA helicase [Triticum aestivum]
Length = 742
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + I + ++ I R + I +G +P ++ KL L+RA+E G
Sbjct: 283 VDRHW-SEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPESKLGTELLRAIEKVGY 341
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
KKP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 342 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEDNEAEG 397
Query: 221 PYGLIICPSRELARQTHDIIQYYCAALPI 249
PY +++ P+RELA+Q + + L I
Sbjct: 398 PYAVVMAPTRELAQQIEEETVKFATYLGI 426
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 359 RDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEDNEAEGPYAVVMAPTRELAQQIE 414
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + L I + + +GG + + I++G
Sbjct: 415 EETVKFATYLGIKVVSI--VGGQSIEEQGFKIRQG 447
>gi|391348261|ref|XP_003748366.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Metaseiulus
occidentalis]
Length = 748
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R L I V G SF M L +L++A+ + PTPIQ Q IP AL+GRD+I
Sbjct: 221 LRTTLGIKVIGAMASKPVVSFAHMNLDANLMKAVRKALYETPTPIQAQAIPLALNGRDLI 280
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQ-ETKLPFLPGEGPYGLIICPSRELARQ 235
GIA TGSGKTL F++PIL+ ++Q E K+ GEGP GLI+ P+RELA Q
Sbjct: 281 GIAKTGSGKTLAFLIPILVHIMDQAELKV----GEGPIGLILAPTRELAMQ 327
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQ-ETKLPFLPGEGPYGLIICPSRELARQTHD 64
N RD+IGIA TGSGKTL F++PIL+ ++Q E K+ GEGP GLI+ P+RELA Q +
Sbjct: 275 NGRDLIGIAKTGSGKTLAFLIPILVHIMDQAELKV----GEGPIGLILAPTRELAMQIYT 330
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQS 91
+ + + + C GG QS
Sbjct: 331 EAKKFAKVYNVNVACCFG-GGSKWEQS 356
>gi|440794934|gb|ELR16079.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 972
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
Query: 151 LPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQE 210
L + ++ +KPTPIQ Q IPA +SGRD+IG A TGSGKTL F+LP+L L+Q
Sbjct: 250 LSSKIYAVMKHSSFEKPTPIQAQAIPAIMSGRDLIGCAKTGSGKTLAFLLPMLRHILDQ- 308
Query: 211 TKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
P L PGEGP GLI+ P+RELA Q H + +C + + S
Sbjct: 309 ---PHLEPGEGPIGLIMAPTRELALQIHRDAKKFCKGIGLRS 347
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD+IG A TGSGKTL F+LP+L L+Q P L PGEGP GLI+ P+RELA Q H
Sbjct: 279 SGRDLIGCAKTGSGKTLAFLLPMLRHILDQ----PHLEPGEGPIGLIMAPTRELALQIHR 334
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +C I LR+ GG + + +K G +
Sbjct: 335 DAKKFCKG--IGLRSICVYGGSVVADQISKLKAGAE 368
>gi|297845068|ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
gi|297336257|gb|EFH66674.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
Length = 827
Score = 94.0 bits (232), Expect = 6e-17, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + V G DVP + L ++ ++ +KP PIQ Q +P +SGRD IG
Sbjct: 174 RKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIG 233
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q H I+ +
Sbjct: 234 VAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKP 290
Query: 247 LPI 249
L I
Sbjct: 291 LGI 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IG+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q H
Sbjct: 227 SGRDCIGVAKTGSGKTLGFVLPMLRHIKDQP---PVEAGDGPIGLVMAPTRELVQQIHSD 283
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I+ + + P+ +R GG + Q + +K+G +
Sbjct: 284 IRKF--SKPLGIRCVPVYGGSGVAQQISELKRGTE 316
>gi|119178046|ref|XP_001240731.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 542
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R+ + V G +VP +F P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 105 EAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRD 164
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 165 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLGPGDGPIVLVLAPTRELAVQ 213
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 163 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLGPGDGPIVLVLAPTRELAVQIQAEI 218
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 219 TKFGKSSRI--RNTCVYGGVPRGPQIRDLSRGVE 250
>gi|357112553|ref|XP_003558073.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like
[Brachypodium distachyon]
Length = 767
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 128 RNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGI 187
++L I V G DVP +F P L+ A+ +G +KPT IQ Q +P LSGRDIIGI
Sbjct: 198 KSLAIRVSGFDVPRPVKNFADCGFPVPLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGI 257
Query: 188 AFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 237
A TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 258 AKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIY 304
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 250 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIY- 304
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P L+ GGV +K G +
Sbjct: 305 -LEAKKFAKPYNLQVAAVYGGVSKFDQFKELKAGCE 339
>gi|357495749|ref|XP_003618163.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493178|gb|AES74381.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 666
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P S+ KL + +++A+E G
Sbjct: 210 VDRHW-SEKNLEEMQERDWRIFREDYNISYKGSKIPRPIRSWVESKLSQEILKAVEKAGY 268
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
K P+PIQ+ IP L RD+IG+A TGSGKT FVLP+L + T+LP + EG
Sbjct: 269 KTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEG 324
Query: 221 PYGLIICPSRELARQTHD 238
PY +++ P+RELA+Q D
Sbjct: 325 PYAVVMAPTRELAQQIED 342
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IG+A TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 286 RDVIGVAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQIE 341
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + + I + + +GG + + I++G
Sbjct: 342 DETVKFAQYMGIKVVSI--VGGQSIEEQGFKIRQG 374
>gi|303315651|ref|XP_003067830.1| ATP-dependent RNA helicase DBP2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|442570094|sp|Q1DP69.2|DBP2_COCIM RecName: Full=ATP-dependent RNA helicase DBP2
gi|240107506|gb|EER25685.1| ATP-dependent RNA helicase DBP2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320034056|gb|EFW16002.1| ATP-dependent RNA helicase DBP2 [Coccidioides posadasii str.
Silveira]
gi|392867306|gb|EJB11300.1| ATP-dependent RNA helicase DBP2 [Coccidioides immitis RS]
Length = 545
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R+ + V G +VP +F P+ ++ ++A+G KPTPIQ QG P ALSGRD
Sbjct: 108 EAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRD 167
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 168 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLGPGDGPIVLVLAPTRELAVQ 216
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 166 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLGPGDGPIVLVLAPTRELAVQIQAEI 221
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 222 TKFGKSSRI--RNTCVYGGVPRGPQIRDLSRGVE 253
>gi|258577621|ref|XP_002542992.1| hypothetical protein UREG_02508 [Uncinocarpus reesii 1704]
gi|237903258|gb|EEP77659.1| hypothetical protein UREG_02508 [Uncinocarpus reesii 1704]
Length = 783
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G +P S+ LP L+ ++ G K P+PIQ IP AL RD+
Sbjct: 324 IFKEDFNISTKGGSIPNPMRSWGESTLPARLLEIIDKVGYKDPSPIQRAAIPIALQNRDL 383
Query: 185 IGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 242
IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q + +
Sbjct: 384 IGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARK 443
Query: 243 YCAAL 247
+C+ L
Sbjct: 444 FCSPL 448
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 24/140 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHD 64
+RD+IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q +
Sbjct: 380 NRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIEN 439
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
+ +C+ P+ +GG + + ++ G + I++ P ++ D
Sbjct: 440 EARKFCS--PLGFNVVSIVGGHSLEEQSFSLRNGAE-------------IIIATPGRLVD 484
Query: 125 IIRRNLRILVEGDDVPPACC 144
I R + +L + CC
Sbjct: 485 CIERRILVLSQ-------CC 497
>gi|393246045|gb|EJD53554.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 849
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I Y K + P + + ++ D++R L I + G D P + LP S +
Sbjct: 138 INYEPFRKAFYHPPPDVAEMSEEEADLLRLELDGIKIRGVDCPKPITKWAHCGLPASCLD 197
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ +PTPIQ Q IPA +SGRD+IGIA TGSGKT+ F+LP+ +Q P
Sbjct: 198 VIKRLNFDRPTPIQSQAIPAIMSGRDVIGIAKTGSGKTIAFLLPLFRHIKDQR---PLES 254
Query: 218 GEGPYGLIICPSRELARQTH 237
EGP L++ P+RELA Q H
Sbjct: 255 MEGPMALVMTPTRELAVQIH 274
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ +Q P EGP L++ P+RELA Q H
Sbjct: 220 SGRDVIGIAKTGSGKTIAFLLPLFRHIKDQR---PLESMEGPMALVMTPTRELAVQIHRE 276
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 277 CKPFLKVL--GLRAVCAYGGSPIKDQIAEMKKGTE 309
>gi|255565933|ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 564
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 103 DPIKTSWRAPRCILSLPDQVHDIIRRNLRILVE-GDDVPPACC---SFRLMKLPESLVRA 158
DP+ W +L L Q + +R L I V PPA SF M L +++++
Sbjct: 76 DPVLPQWTPSERVLRLNSQQVEDVRARLNIEVTVASGSPPAPAPIESFEDMCLNQNIMKD 135
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ G +PTPIQVQ + +LSGRD++ A TGSGKT F +P++ CL Q P G
Sbjct: 136 IAYHGYTRPTPIQVQAMTVSLSGRDLLACAETGSGKTAAFTIPMIQHCLAQS---PIRRG 192
Query: 219 EGPYGLIICPSRELARQTHDIIQYYCAAL 247
+GP L++ P+RELA+Q ++ + +L
Sbjct: 193 DGPLALVLAPTRELAQQIEKEVKCFSRSL 221
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 1 MVTYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 60
M + RD++ A TGSGKT F +P++ CL Q P G+GP L++ P+RELA+
Sbjct: 152 MTVSLSGRDLLACAETGSGKTAAFTIPMIQHCLAQS---PIRRGDGPLALVLAPTRELAQ 208
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGI 99
Q ++ + +L RT + +GG + ++ G+
Sbjct: 209 QIEKEVKCFSRSLD-SFRTAIVVGGTNIADQRSELRAGV 246
>gi|115452607|ref|NP_001049904.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 770
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 128 RNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGI 187
++L I V G DVP SF P L+ A+ +G +KPT IQ Q +P LSGRDIIGI
Sbjct: 203 KSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGI 262
Query: 188 AFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 237
A TGSGKT FVLP+++ ++Q P L EGP G++ P+RELA Q +
Sbjct: 263 AKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVVCAPTRELAHQIY 309
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G++ P+RELA Q +
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVVCAPTRELAHQIY- 309
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P LR GGV +K G +
Sbjct: 310 -LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE 344
>gi|68472255|ref|XP_719923.1| hypothetical protein CaO19.6831 [Candida albicans SC5314]
gi|68472490|ref|XP_719806.1| hypothetical protein CaO19.14123 [Candida albicans SC5314]
gi|74656514|sp|Q5ADL0.1|PRP5_CANAL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|46441642|gb|EAL00938.1| hypothetical protein CaO19.14123 [Candida albicans SC5314]
gi|46441768|gb|EAL01063.1| hypothetical protein CaO19.6831 [Candida albicans SC5314]
Length = 884
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 59/148 (39%), Positives = 87/148 (58%), Gaps = 7/148 (4%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRL 148
QS+D ++ Y + K +R + +L D+ ++IR++L I V+G DVP +
Sbjct: 240 QSIDHSQE--NYQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSH 297
Query: 149 MKLPESLVRALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCL 207
+ LP +L + K +KP+ IQ Q +P LSGRD+IGIA TGSGKTL +VLP+L
Sbjct: 298 LALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQ 357
Query: 208 EQETKLPFLPGEGPYGLIICPSRELARQ 235
+Q+ +GP GLI+ P+RELA Q
Sbjct: 358 DQQFS---KDNQGPIGLILSPTRELALQ 382
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + RD+IGIA TGSGKTL +VLP+L +Q+ +GP GLI+ P+RELA Q
Sbjct: 327 TILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFS---KDNQGPIGLILSPTRELALQI 383
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + LR C GG + ++ +KKG++
Sbjct: 384 EKEILNF-TKRNNNLRVCCCYGGSSIENQINELKKGVE 420
>gi|5410326|gb|AAD43033.1| RNA helicase [Homo sapiens]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPLAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPLAVIMTPTRELALQIPKG 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + + LR GG +++ + +K+G +
Sbjct: 465 VRSFKT---LGLRVVCVYGGTGISEQIAELKRGAE 496
>gi|427785455|gb|JAA58179.1| Putative atp-dependent rna helicase ddx23 [Rhipicephalus
pulchellus]
Length = 788
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G +P + LP +++ ++ G K PTPIQ Q IP L RDI
Sbjct: 341 IFREDFNITIKGGRIPNPLRKWSECNLPTAILDVIKELGYKDPTPIQRQAIPIGLQNRDI 400
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQTHDI 239
IG+A TGSGKTL F+LP+L++ T LP + +GPY +I+ P+RELA+Q +
Sbjct: 401 IGVAETGSGKTLAFLLPLLVWI----TSLPKIERQEDADQGPYAIIMAPTRELAQQIDEE 456
Query: 240 IQYYCAALPIGS 251
+ L I S
Sbjct: 457 TTKFAKMLDIRS 468
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 11/85 (12%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKTL F+LP+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 397 NRDIIGVAETGSGKTLAFLLPLLVWI----TSLPKIERQEDADQGPYAIIMAPTRELAQQ 452
Query: 62 THDIIQYYCAALPIPLRTCLAIGGV 86
+ + L I R+ IGG+
Sbjct: 453 IDEETTKFAKMLDI--RSVAVIGGL 475
>gi|383852804|ref|XP_003701915.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Megachile
rotundata]
Length = 609
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R N I V+GD++P F P ++ + +G +PT IQ QG P ALSG+D++
Sbjct: 95 FRENAEITVKGDNIPNPIQHFEEGNFPPYVLEVIHKQGYSQPTAIQAQGWPIALSGKDLV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDI 239
IA TGSGKTL ++LP ++ + Q P L PG+GP LI+ P+RELA+Q ++
Sbjct: 155 AIAQTGSGKTLGYILPAIVHIIHQ----PRLSPGDGPVALILAPTRELAQQIQEV 205
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
+D++ IA TGSGKTL ++LP ++ + Q P L PG+GP LI+ P+RELA+Q ++
Sbjct: 151 KDLVAIAQTGSGKTLGYILPAIVHIIHQ----PRLSPGDGPVALILAPTRELAQQIQEVA 206
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C +R GG P +++G++
Sbjct: 207 N--CFGESSGVRNTCIFGGAPKGPQAHDLERGVE 238
>gi|67459931|ref|NP_001019988.1| probable ATP-dependent RNA helicase DDX46 [Danio rerio]
gi|82277867|sp|Q4TVV3.1|DDX46_DANRE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|66473312|gb|AAY46301.1| DEAD box protein 46 [Danio rerio]
Length = 1018
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 62/182 (34%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLD-VIKKGIQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ V + IQY +P + ++ P
Sbjct: 251 ELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQY-EPFRKNFYVEVPE 309
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
P++V + I V+G P ++ + ++ AL+ +KPTPIQ Q
Sbjct: 310 LARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQ 369
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
IPA +SGRD+IGIA TGSGKT+ F+LP+ L+Q P EGP +I+ P+RELA
Sbjct: 370 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQR---PVGEAEGPLAVIMTPTRELA 426
Query: 234 RQ 235
Q
Sbjct: 427 LQ 428
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ L+Q P EGP +I+ P+RELA Q
Sbjct: 376 SGRDLIGIAKTGSGKTIAFLLPMFRHILDQR---PVGEAEGPLAVIMTPTRELALQITKE 432
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L LR GG +++ + +K+G +
Sbjct: 433 CKKFSKSL--ALRVVCVYGGTGISEQIAELKRGAE 465
>gi|126632201|gb|AAI33101.1| Ddx46 protein [Danio rerio]
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 62/182 (34%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLD-VIKKGIQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ V + IQY +P + ++ P
Sbjct: 265 ELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQY-EPFRKNFYVEVPE 323
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
P++V + I V+G P ++ + ++ AL+ +KPTPIQ Q
Sbjct: 324 LARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQ 383
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
IPA +SGRD+IGIA TGSGKT+ F+LP+ L+Q P EGP +I+ P+RELA
Sbjct: 384 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQR---PVGEAEGPLAVIMTPTRELA 440
Query: 234 RQ 235
Q
Sbjct: 441 LQ 442
Score = 63.5 bits (153), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ L+Q P EGP +I+ P+RELA Q
Sbjct: 390 SGRDLIGIAKTGSGKTIAFLLPMFRHILDQR---PVGEAEGPLAVIMTPTRELALQITKE 446
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L LR GG +++ + +K+G +
Sbjct: 447 CKKFSKSL--ALRVVCVYGGTGISEQIAELKRGAE 479
>gi|157119649|ref|XP_001653435.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875244|gb|EAT39469.1| AAEL008738-PA [Aedes aegypti]
Length = 911
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 50/130 (38%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 112 PRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P + P++V R ++I V G+ VP F P+ ++ + G PT IQ
Sbjct: 198 PNVMARTPEEVQ-AFRERMQITVMGNSVPHPSQDFEEGNFPDFVMNEINKMGFPNPTAIQ 256
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
QG P ALSGRD++GIA TGSGKTL ++LP ++ Q+ P GEGP L++ P+RE
Sbjct: 257 AQGWPIALSGRDLVGIAQTGSGKTLAYMLPGIVHIAHQK---PLQRGEGPVVLVLAPTRE 313
Query: 232 LARQTHDIIQ 241
LA+Q +++
Sbjct: 314 LAQQIQTVVR 323
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP ++ Q+ P GEGP L++ P+RELA+Q +
Sbjct: 265 SGRDLVGIAQTGSGKTLAYMLPGIVHIAHQK---PLQRGEGPVVLVLAPTRELAQQIQTV 321
Query: 66 IQ-YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ + + P+ TC+ G + Q D +++G++
Sbjct: 322 VRDFGTHSKPLIRYTCIFGGALKGPQVRD-LERGVE 356
>gi|444517226|gb|ELV11421.1| putative ATP-dependent RNA helicase DDX46 [Tupaia chinensis]
Length = 1078
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 330 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 388
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 389 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 447
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 448 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 504
Query: 233 ARQ 235
A Q
Sbjct: 505 ALQ 507
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 455 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 511
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 512 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 544
>gi|431892646|gb|ELK03079.1| Putative ATP-dependent RNA helicase DDX46 [Pteropus alecto]
Length = 1580
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 611 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 669
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 670 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 728
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 729 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 785
Query: 233 ARQ 235
A Q
Sbjct: 786 ALQ 788
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 736 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 792
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 793 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 825
>gi|426350064|ref|XP_004042602.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like, partial
[Gorilla gorilla gorilla]
Length = 882
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 134 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 192
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 193 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 251
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 252 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 308
Query: 233 ARQ 235
A Q
Sbjct: 309 ALQ 311
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 259 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 315
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 316 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 348
>gi|73971268|ref|XP_531911.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Canis lupus
familiaris]
gi|194219918|ref|XP_001918233.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Equus
caballus]
gi|426229554|ref|XP_004008855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Ovis aries]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|62089534|gb|AAH92240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 1027
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|85540944|sp|Q569Z5.2|DDX46_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|75061689|sp|Q5R6D8.1|DDX46_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|55731939|emb|CAH92678.1| hypothetical protein [Pongo abelii]
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|40788370|dbj|BAA34521.2| KIAA0801 protein [Homo sapiens]
Length = 1058
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 309 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 367
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 368 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 426
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 427 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 483
Query: 233 ARQ 235
A Q
Sbjct: 484 ALQ 486
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 434 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 490
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 491 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 523
>gi|39104531|dbj|BAC98030.2| mKIAA0801 protein [Mus musculus]
Length = 1044
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 300 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 358
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 359 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 417
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 418 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 474
Query: 233 ARQ 235
A Q
Sbjct: 475 ALQ 477
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 425 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 481
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 482 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 514
>gi|20806137|ref|NP_620798.1| probable ATP-dependent RNA helicase DDX46 [Rattus norvegicus]
gi|81890303|sp|Q62780.1|DDX46_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=Helicase of
117.4 kDa
gi|897915|gb|AAC52210.1| RNA helicase [Rattus norvegicus]
gi|78174325|gb|AAI07591.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|410948190|ref|XP_003980824.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Felis catus]
Length = 1030
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 282 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 340
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 341 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 399
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 400 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 456
Query: 233 ARQ 235
A Q
Sbjct: 457 ALQ 459
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 407 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 463
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 464 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 496
>gi|402872563|ref|XP_003900179.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Papio anubis]
Length = 984
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|390459218|ref|XP_002744211.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Callithrix
jacchus]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|355683297|gb|AER97080.1| DEAD box polypeptide 46 [Mustela putorius furo]
Length = 842
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 94 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 152
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 153 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 211
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 212 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 268
Query: 233 ARQ 235
A Q
Sbjct: 269 ALQ 271
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 219 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 275
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 276 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 308
>gi|354471891|ref|XP_003498174.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Cricetulus griseus]
Length = 1029
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 281 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 339
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 340 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 398
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 399 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 455
Query: 233 ARQ 235
A Q
Sbjct: 456 ALQ 458
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 406 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 462
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 463 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 495
>gi|351708460|gb|EHB11379.1| Putative ATP-dependent RNA helicase DDX46 [Heterocephalus glaber]
Length = 1255
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 554 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 612
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 613 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 671
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 672 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 728
Query: 233 ARQ 235
A Q
Sbjct: 729 ALQ 731
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 679 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 735
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 736 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 768
>gi|348575057|ref|XP_003473306.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Cavia porcellus]
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|348575055|ref|XP_003473305.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Cavia porcellus]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|344264944|ref|XP_003404549.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Loxodonta
africana]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|344240362|gb|EGV96465.1| putative ATP-dependent RNA helicase DDX46 [Cricetulus griseus]
Length = 1172
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 424 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 482
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 483 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 541
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 542 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 598
Query: 233 ARQ 235
A Q
Sbjct: 599 ALQ 601
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 549 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 605
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 606 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 638
>gi|332234495|ref|XP_003266442.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Nomascus
leucogenys]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|301754307|ref|XP_002912967.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Ailuropoda melanoleuca]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|386781262|ref|NP_001248109.1| probable ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|380818496|gb|AFE81121.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|383423315|gb|AFH34871.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|384950636|gb|AFI38923.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|291387348|ref|XP_002710262.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Oryctolagus
cuniculus]
Length = 1030
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 282 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 340
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 341 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 399
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 400 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 456
Query: 233 ARQ 235
A Q
Sbjct: 457 ALQ 459
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 407 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 463
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 464 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 496
>gi|160420299|ref|NP_666087.3| probable ATP-dependent RNA helicase DDX46 [Mus musculus]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|158257008|dbj|BAF84477.1| unnamed protein product [Homo sapiens]
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|149039843|gb|EDL93959.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 940
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|148709275|gb|EDL41221.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 963
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 215 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 273
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 274 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 332
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 333 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 389
Query: 233 ARQ 235
A Q
Sbjct: 390 ALQ 392
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 340 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 396
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 397 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 429
>gi|119582644|gb|EAW62240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_c [Homo
sapiens]
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|119582642|gb|EAW62238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
gi|119582646|gb|EAW62242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
Length = 883
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|148228442|ref|NP_001082679.1| DEAD (Asp-Glu-Ala-Asp) box helicase 17 [Xenopus laevis]
gi|51704021|gb|AAH80992.1| LOC398649 protein [Xenopus laevis]
Length = 610
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Query: 123 HDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
HD+ +RR I + G + P +F P+ ++ L + K+PTPIQ QG P ALS
Sbjct: 59 HDVEELRRKKEITIRGVNCPKPLYAFHQANFPQYVLDVLLDQRFKEPTPIQCQGFPLALS 118
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
GRD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 119 GRDMVGIAQTGSGKTLAYLLPAMVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQV 174
Query: 240 IQYY 243
Y
Sbjct: 175 ADDY 178
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 120 RDMVGIAQTGSGKTLAYLLPAMVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVA 175
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y + TC+ GG P + +++G++
Sbjct: 176 DDYGKTSRLK-STCI-YGGAPKGPQIRDLERGVE 207
>gi|41327773|ref|NP_055644.2| probable ATP-dependent RNA helicase DDX46 [Homo sapiens]
gi|332821955|ref|XP_517939.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan
troglodytes]
gi|397518269|ref|XP_003829316.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan paniscus]
gi|116241326|sp|Q7L014.2|DDX46_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=PRP5 homolog
gi|15126766|gb|AAH12304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
gi|119582645|gb|EAW62241.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_d [Homo
sapiens]
Length = 1031
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|23336902|tpg|DAA00076.1| TPA_exp: Prp5-like DEAD-box protein [Homo sapiens]
gi|410212896|gb|JAA03667.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212898|gb|JAA03668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212900|gb|JAA03669.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256700|gb|JAA16317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256702|gb|JAA16318.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410300506|gb|JAA28853.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410350251|gb|JAA41729.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
Length = 1032
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|429859673|gb|ELA34444.1| RNA helicase [Colletotrichum gloeosporioides Nara gc5]
Length = 522
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR ++ + G+DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 82 DSFRRKHQMTIAGNDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 141
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 142 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISK 197
Query: 243 YCAALPI 249
+ + I
Sbjct: 198 FGKSSRI 204
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 140 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEI 195
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 196 SKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 227
>gi|345327882|ref|XP_001510706.2| PREDICTED: probable ATP-dependent RNA helicase DDX46, partial
[Ornithorhynchus anatinus]
Length = 973
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSWRAPRCI 115
EL D ++Y + L+T L + L+ + G I+Y K + +
Sbjct: 225 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPYRKNFYVEVPEL 284
Query: 116 LSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ + +I+R + I V+G P S+ + ++ +L G +KPTPIQ Q
Sbjct: 285 AKMSLEEVNIMRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLRKHGYEKPTPIQTQA 344
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA
Sbjct: 345 IPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELAL 401
Query: 235 QTHDIIQYYCAAL 247
Q + + AL
Sbjct: 402 QITKECKKFSKAL 414
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 350 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 406
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + AL LR GG +++ + +K+G + + T R + + +V ++
Sbjct: 407 CKKFSKAL--GLRVVCVYGGTGISEQIAELKRGAEI--IVCTPGRMIDMLAANSGRVTNL 462
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPE-------------SLVRALEA---KGIKKPTP 169
R +L E D + ++M++ + + RA+EA + + KP
Sbjct: 463 RRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILNKPVE 522
Query: 170 IQVQG 174
+QV G
Sbjct: 523 VQVGG 527
>gi|242041163|ref|XP_002467976.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
gi|241921830|gb|EER94974.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
Length = 766
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y+ K + I + DQ ++L I V G DVP +F+ P L+ A
Sbjct: 174 IEYDAFTKDFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFQDCGFPVPLMNA 233
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ + +KPT IQ Q +P LSGRDIIGIA TGSGKT FVLP+++ ++Q P L
Sbjct: 234 IAKQAYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEK 289
Query: 219 -EGPYGLIICPSRELARQTH 237
EGP G+I P+RELA Q +
Sbjct: 290 EEGPIGVICAPTRELAHQIY 309
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIY- 309
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P LR GGV +K G +
Sbjct: 310 -LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCE 344
>gi|367015284|ref|XP_003682141.1| hypothetical protein TDEL_0F01190 [Torulaspora delbrueckii]
gi|359749803|emb|CCE92930.1| hypothetical protein TDEL_0F01190 [Torulaspora delbrueckii]
Length = 549
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + + G D+P SF P+ +++ ++A+G KPT IQ QG P ALSGRD+I
Sbjct: 91 FRKENEMTISGHDIPKPITSFDEAGFPDYVLKEVKAEGFDKPTGIQCQGWPMALSGRDMI 150
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
G+A TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q IQ C
Sbjct: 151 GVAATGSGKTLSYCLPSIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----IQKEC 202
Query: 245 AAL 247
+
Sbjct: 203 SKF 205
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 13/97 (13%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IG+A TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 147 RDMIGVAATGSGKTLSYCLPSIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----I 198
Query: 67 QYYCAALPIPLR---TCLAIGGVPMNQSLDVIKKGIQ 100
Q C+ R TC+ GGVP Q + + +G +
Sbjct: 199 QKECSKFGKSSRIRNTCV-YGGVPRGQQIRDLARGAE 234
>gi|449484206|ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
24-like [Cucumis sativus]
Length = 774
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++L I V G DVP +F L+ A++ +G +KPT IQ Q +P LSG DIIG
Sbjct: 217 RKSLAIRVSGFDVPRPVKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIG 276
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 237
IA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 277 IAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIY 324
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHDIIQ 67
DIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q + +
Sbjct: 273 DIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIYLECK 328
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A LR GG+ L +K G +
Sbjct: 329 KFSKAH--GLRVSAVYGGMSKFDQLKELKAGCE 359
>gi|449469020|ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Cucumis
sativus]
Length = 777
Score = 93.6 bits (231), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++L I V G DVP +F L+ A++ +G +KPT IQ Q +P LSG DIIG
Sbjct: 214 RKSLAIRVSGFDVPRPVKTFEDCGFSPQLMNAIKKQGYEKPTSIQCQAMPIVLSGGDIIG 273
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 237
IA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 274 IAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIY 321
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHDIIQ 67
DIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q + +
Sbjct: 270 DIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIYLECK 325
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A LR GG+ L +K G +
Sbjct: 326 KFSKAH--GLRVSAVYGGMSKFDQLKELKAGCE 356
>gi|328771766|gb|EGF81805.1| hypothetical protein BATDEDRAFT_16042 [Batrachochytrium
dendrobatidis JAM81]
Length = 584
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPT 168
W + + + + D+ I + + I +G ++P ++ +L E+++ A+ G K+PT
Sbjct: 127 W-SEKKLSEMKDRDWRIFKEDFSISTKGGNIPNPLRTWDECELSETILGAISRIGYKEPT 185
Query: 169 PIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICP 228
PIQ Q IP L RDIIGIA TGSGKT FV+P+L F E +GPY LI+ P
Sbjct: 186 PIQRQAIPMGLQNRDIIGIAETGSGKTASFVIPMLKFITEMPPLTEINSSQGPYALILAP 245
Query: 229 SRELARQ 235
+RELA+Q
Sbjct: 246 TRELAQQ 252
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 61
+RDIIGIA TGSGKT FV+P+L F E +GPY LI+ P+RELA+Q
Sbjct: 197 QNRDIIGIAETGSGKTASFVIPMLKFITEMPPLTEINSSQGPYALILAPTRELAQQ 252
>gi|393245555|gb|EJD53065.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 756
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPT 168
W + + + + D+ I R + I G +P S+ ++P+ ++ +E G K+P+
Sbjct: 276 W-SEKPLKDMKDRDWRIFREDFSISARGGQIPHPLRSWEESEIPQQILDVIEGIGYKEPS 334
Query: 169 PIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGL 224
PIQ Q IP L GRD+IGIA TGSGKT FV+P+L++ + LP + GPY L
Sbjct: 335 PIQRQAIPIGLQGRDLIGIAETGSGKTASFVIPMLVYI----SNLPLFNEDNRHLGPYAL 390
Query: 225 IICPSRELARQTHDIIQYYCAAL 247
I+ P+RELA+Q + + + L
Sbjct: 391 ILAPTRELAQQIESEARKFASPL 413
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 31/153 (20%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FV+P+L++ + LP + GPY LI+ P+RELA+Q
Sbjct: 348 RDLIGIAETGSGKTASFVIPMLVYI----SNLPLFNEDNRHLGPYALILAPTRELAQQIE 403
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
+ + + P+ + +GG + + +++G + +++ P ++
Sbjct: 404 SEARKFAS--PLGYKCVSIVGGRSVEEQSFNMREGAE-------------IVIATPGRLK 448
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
D++ R++ +L + C++ +M + +V
Sbjct: 449 DVLERHVLVL--------SQCTYIVMDEADRMV 473
>gi|412993972|emb|CCO14483.1| predicted protein [Bathycoccus prasinos]
Length = 575
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEG--DDVPPAC--CSFRLMKLPESLVRALEAKGI 164
W+ +L+L + +R L +L E +D SF MKL + +++A G
Sbjct: 74 WQPSERVLNLTKSQIEDMRERLNVLAESPEEDTNEYAPIESFEDMKLDREIALSIKAHGF 133
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE-QETKLPFLPGEGPYG 223
KPTPIQ QGIP LSG D++G A TGSGKT F +P++ +C+ + G+GP
Sbjct: 134 DKPTPIQAQGIPVILSGSDVLGCAETGSGKTAAFAIPMIHYCVSISDAYGATRRGDGPTA 193
Query: 224 LIICPSRELARQTHDIIQYYCAALPIGSF 252
+++ P+RELA+Q + + A+ F
Sbjct: 194 IVLAPTRELAQQIEKETKAFSQAIDKRRF 222
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLE-QETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
D++G A TGSGKT F +P++ +C+ + G+GP +++ P+RELA+Q +
Sbjct: 152 DVLGCAETGSGKTAAFAIPMIHYCVSISDAYGATRRGDGPTAIVLAPTRELAQQIEKETK 211
Query: 68 YYCAALPI-PLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDII 126
+ A+ +T + +GG MN+ ++ G++ C+++ P ++ D I
Sbjct: 212 AFSQAIDKRRFKTTIVVGGSSMNEQRGDLRNGVE-------------CVVATPGRLIDHI 258
Query: 127 RRN 129
+N
Sbjct: 259 HQN 261
>gi|326524209|dbj|BAJ97115.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 764
Score = 93.6 bits (231), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 128 RNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGI 187
++L I V G DVP +F P L+ A+ +G +KPT IQ Q +P LSGRDIIGI
Sbjct: 198 KSLAIRVSGFDVPRPVKNFEDCGFPVPLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGI 257
Query: 188 AFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
A TGSGKT FVLP+++ ++Q EGP G+I P+RELA Q +
Sbjct: 258 AKTGSGKTAAFVLPMIVHIMDQPE---LQKEEGPIGVICAPTRELAHQIY 304
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RDIIGIA TGSGKT FVLP+++ ++Q EGP G+I P+RELA Q +
Sbjct: 250 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE---LQKEEGPIGVICAPTRELAHQIY-- 304
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P L+ GGV + +K G +
Sbjct: 305 LEAKKFAKPYNLQVAAVYGGVSKFEQFKELKSGCE 339
>gi|66805957|ref|XP_636700.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
gi|74896924|sp|Q54IV3.1|DDX42_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName:
Full=DEAD box protein 42
gi|60465098|gb|EAL63199.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
Length = 986
Score = 93.2 bits (230), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
IR+NL I + G D+ SF + L++A+ + I+ PTPIQ Q IP ALSGRD+I
Sbjct: 287 IRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLI 346
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTH 237
IA TGSGKT F+ P + ++Q P+L G+GP L + P+RELA Q +
Sbjct: 347 AIAKTGSGKTATFIWPSISHIMDQ----PYLEKGDGPIALFLAPTRELAHQIY 395
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTH- 63
+ RD+I IA TGSGKT F+ P + ++Q P+L G+GP L + P+RELA Q +
Sbjct: 341 SGRDLIAIAKTGSGKTATFIWPSISHIMDQ----PYLEKGDGPIALFLAPTRELAHQIYL 396
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++Y + L+T + GGV Q +K G +
Sbjct: 397 ETLKY---SKYFKLKTTVLYGGVSKQQQCKELKAGCE 430
>gi|341940436|sp|Q61656.2|DDX5_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box RNA helicase DEAD1; Short=mDEAD1; AltName:
Full=DEAD box protein 5; AltName: Full=RNA helicase p68
Length = 614
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|74149390|dbj|BAE22450.1| unnamed protein product [Mus musculus]
Length = 615
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|440467823|gb|ELQ37019.1| phosphomethylpyrimidine kinase [Magnaporthe oryzae Y34]
gi|440484756|gb|ELQ64783.1| phosphomethylpyrimidine kinase [Magnaporthe oryzae P131]
Length = 1039
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR + V+G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 573 DKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 632
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 633 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQ 681
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 629 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQA 684
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 685 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 718
>gi|453083070|gb|EMF11116.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 546
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR I ++G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 104 DEFRRKHVITIQGRDVPKPVHTFDEAGFPNYVISEVKAQGFAAPTAIQSQGWPMALSGRD 163
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q + +
Sbjct: 164 VVGIAETGSGKTLTYTLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQEEVSK 219
Query: 243 YCAALPI 249
+ + I
Sbjct: 220 FGKSSRI 226
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L G+GP LI+ P+RELA Q +
Sbjct: 160 SGRDVVGIAETGSGKTLTYTLPAIVHINAQ----PLLAQGDGPIVLILAPTRELAVQIQE 215
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + I R GGVP + + +G++
Sbjct: 216 EVSKFGKSSRI--RNTCVYGGVPKGGQIRDLARGVE 249
>gi|451847658|gb|EMD60965.1| hypothetical protein COCSADRAFT_174289 [Cochliobolus sativus
ND90Pr]
Length = 1084
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ ++ V+G ++P +F P ++ ++A+G KPT IQ QG P ALSGRD++G
Sbjct: 658 RKEHQMTVKGTNIPKPVTTFDEAGFPSYVMNEVKAQGFAKPTAIQAQGWPMALSGRDVVG 717
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYY 243
+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I +
Sbjct: 718 VAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISKF 771
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 711 SGRDVVGVAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQ 766
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 767 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLARGVE 800
>gi|212543663|ref|XP_002151986.1| RNA helicase (Dbp), putative [Talaromyces marneffei ATCC 18224]
gi|210066893|gb|EEA20986.1| RNA helicase (Dbp), putative [Talaromyces marneffei ATCC 18224]
Length = 554
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ ++ V G +VP SF P ++ ++A+G KPT IQ QG P ALSGRD
Sbjct: 105 DAFRKEHQMAVTGRNVPRPVESFDEAGFPNYVLSEVKAQGFAKPTAIQSQGWPMALSGRD 164
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 165 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLSPGDGPIVLILAPTRELAVQIQTEISK 220
Query: 243 Y 243
+
Sbjct: 221 F 221
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 163 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLSPGDGPIVLILAPTRELAVQIQTEI 218
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 219 SKFGRSSRI--RNTCVYGGVPKGPQIRDLSRGVE 250
>gi|166797029|gb|AAI59199.1| Ddx5 protein [Danio rerio]
Length = 488
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ I V+G D P F P+ ++ + + PTPIQ QG P ALSG+D++G
Sbjct: 79 RRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVG 138
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q + Y
Sbjct: 139 IAQTGSGKTLSYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQVAAEYGK 194
Query: 246 ALPIGS 251
A I S
Sbjct: 195 ASRIKS 200
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ +D++GIA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q
Sbjct: 132 SGKDMVGIAQTGSGKTLSYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQ 187
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y A I TC+ GG P + +++G++
Sbjct: 188 VAAEYGKASRIK-STCI-YGGAPKGPQIRDLERGVE 221
>gi|429964896|gb|ELA46894.1| hypothetical protein VCUG_01592 [Vavraia culicis 'floridensis']
Length = 482
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 103 DPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAK 162
D K +R + + D + R ++ + G+ VP F + + + K
Sbjct: 34 DFEKNFYRESARVSEMGDNEVNSFREKNQMKIIGEGVPKPIIGFEDVDFGAGVQNYFKKK 93
Query: 163 GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPY 222
K P IQ QG P ALSGRD++GIA TGSGKT+ F LP L+ QE P PG+GP
Sbjct: 94 EFKSPMAIQAQGWPMALSGRDMVGIAQTGSGKTISFALPALVHAAAQE---PLRPGDGPI 150
Query: 223 GLIICPSRELARQTHDIIQYY 243
LI+ P+REL Q ++++ Y
Sbjct: 151 ALILAPTRELCLQIQEVVEEY 171
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKT+ F LP L+ QE P PG+GP LI+ P+REL Q ++++
Sbjct: 113 RDMVGIAQTGSGKTISFALPALVHAAAQE---PLRPGDGPIALILAPTRELCLQIQEVVE 169
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y +R+ GGV I++G++
Sbjct: 170 EYDRFF--KMRSLAVYGGVSAFPQRQGIRRGVE 200
>gi|194752113|ref|XP_001958367.1| GF10884 [Drosophila ananassae]
gi|190625649|gb|EDV41173.1| GF10884 [Drosophila ananassae]
Length = 822
Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats.
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D N I ++GD VP F P+ ++ + +G KPT IQ QG P A+SGRD
Sbjct: 131 DTFLANNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRD 190
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
++G+A TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 191 LVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQV 243
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q
Sbjct: 187 SGRDLVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQ 242
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + + R GG P Q +++G++
Sbjct: 243 VAIEFGSNTHV--RNTCIFGGAPKGQQARDLERGVE 276
>gi|307202910|gb|EFN82130.1| Probable ATP-dependent RNA helicase DDX46 [Harpegnathos saltator]
Length = 1034
Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 11/184 (5%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYND--PIKTSW--RAP 112
EL Q D ++Y L A G+ Q ++ K D P + S+ P
Sbjct: 283 ELIEQNQDGLEYSSEEEGENLHETAA--GIANKQKRELAKVDHATTDYQPFRKSFYVEVP 340
Query: 113 RCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQ 171
P++V +I + L I V+G P S+ + + + L+ G +KPTPIQ
Sbjct: 341 EIARMTPEEV-EIYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQ 399
Query: 172 VQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRE 231
Q IPA +SGRD+IGIA TGSGKTL F+LP+ L+Q P G+GP LI+ P+RE
Sbjct: 400 CQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRE 456
Query: 232 LARQ 235
L Q
Sbjct: 457 LCMQ 460
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 408 SGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQIGRD 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L + C+ GG +++ + +K+G +
Sbjct: 465 SKKFTKSLGLS-HVCV-YGGTGISEQIAELKRGAE 497
>gi|170035806|ref|XP_001845758.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
gi|167878195|gb|EDS41578.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
Length = 409
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 3/117 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R++ I ++G D P +F P +V + G PTPIQ QG P ALSGRD++G
Sbjct: 71 RKSKEITIKGRDCPDPIFTFEDSGFPAEIVDEMRYAGFTAPTPIQSQGWPIALSGRDMVG 130
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
IA TGSGKTL ++LP M +EQ++++ G+GP LI+ P+RELA+Q + +
Sbjct: 131 IAKTGSGKTLSYLLPA-MLHIEQQSRIR--RGDGPIALILAPTRELAQQIKQVADEF 184
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL ++LP M +EQ++++ G+GP LI+ P+RELA+Q +
Sbjct: 124 SGRDMVGIAKTGSGKTLSYLLPA-MLHIEQQSRIR--RGDGPIALILAPTRELAQQIKQV 180
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDV 94
+ + I TCL GG QS D+
Sbjct: 181 ADEFGRPVKIK-NTCLFGGGAKRQQSQDL 208
>gi|205364353|gb|ACI04543.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, partial [Rattus
norvegicus]
Length = 614
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|55562721|gb|AAH86320.1| Ddx5 protein, partial [Mus musculus]
Length = 648
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 107 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 166
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 167 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 222
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 223 YCRACRLKS 231
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 166 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 221
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 222 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 252
>gi|359475106|ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 712
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I +G +P S+ KL L++A+E G K P+PIQ+ IP L RD+
Sbjct: 273 IFREDFNISYKGSKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQRDV 332
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q D
Sbjct: 333 IGIAETGSGKTAAFVLPMLTYI----SRLPPMSEENEAEGPYAVVMAPTRELAQQIEDET 388
Query: 241 QYYCAALPI 249
+ L I
Sbjct: 389 VKFAHYLGI 397
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 330 RDVIGIAETGSGKTAAFVLPMLTYI----SRLPPMSEENEAEGPYAVVMAPTRELAQQIE 385
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 386 DETVKFAHYLGIKVVSI--VGGQSIEEQGFRIRQG 418
>gi|307191879|gb|EFN75298.1| Probable ATP-dependent RNA helicase DDX5 [Harpegnathos saltator]
Length = 627
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R N I V+G++VP F P ++ + +G +PTPIQ QG P ALSGRD++
Sbjct: 107 FRENTEITVKGENVPNPIQYFEEGNFPPYVMEGIRRQGYSQPTPIQAQGWPIALSGRDLV 166
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYC 244
IA TGSGKTL ++LP ++ + Q P L G+GP LI+ P+RELA+Q ++ +
Sbjct: 167 AIAQTGSGKTLGYILPAIVHIIHQ----PRLSNGDGPIALILAPTRELAQQIQEVANCFG 222
Query: 245 AALPI 249
+ +
Sbjct: 223 ESAAV 227
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKTL ++LP ++ + Q P L G+GP LI+ P+RELA+Q ++
Sbjct: 163 RDLVAIAQTGSGKTLGYILPAIVHIIHQ----PRLSNGDGPIALILAPTRELAQQIQEVA 218
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C +R GG P + +G++
Sbjct: 219 N--CFGESAAVRNTCIFGGAPKGPQAHDLDRGVE 250
>gi|302922639|ref|XP_003053509.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
gi|256734450|gb|EEU47796.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
Length = 1201
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 91 SLDVIKKGIQYNDPIKTS-WRAPRCILSLPD-QVHDIIRRNLRILVEGDDVPPACCSFRL 148
++D K IQ PI+ + W P + L + +V D+ I V G DVP +
Sbjct: 551 TIDYTKVEIQ---PIRKNFWVEPAELSQLTETEVTDLRLELDGIKVNGKDVPKPVQKWAQ 607
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
L + ++ G +KPTPIQ+Q +PA +SGRD+IG+A TGSGKT+ F+LP+ +
Sbjct: 608 CGLTRQTLDVIDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKD 667
Query: 209 QETKLPFLPGEGPYGLIICPSRELARQTH 237
Q P +GP GLI+ P+RELA Q H
Sbjct: 668 QP---PLKDTDGPIGLIMTPTRELAVQIH 693
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P +GP GLI+ P+RELA Q H
Sbjct: 639 SGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP---PLKDTDGPIGLIMTPTRELAVQIHRD 695
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + LR+ A GG P+ + + +K+G +
Sbjct: 696 CKPFLKMM--GLRSVCAYGGAPIREQIAELKRGAE 728
>gi|83816893|ref|NP_031866.2| probable ATP-dependent RNA helicase DDX5 [Mus musculus]
gi|26354006|dbj|BAC40633.1| unnamed protein product [Mus musculus]
gi|74141529|dbj|BAE38540.1| unnamed protein product [Mus musculus]
gi|74177712|dbj|BAE38954.1| unnamed protein product [Mus musculus]
gi|82568932|gb|AAI08370.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|120537322|gb|AAI29875.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|127799027|gb|AAH62916.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|148702364|gb|EDL34311.1| mCG2872, isoform CRA_a [Mus musculus]
gi|148702366|gb|EDL34313.1| mCG2872, isoform CRA_a [Mus musculus]
gi|148702367|gb|EDL34314.1| mCG2872, isoform CRA_a [Mus musculus]
Length = 615
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|195171912|ref|XP_002026746.1| GL13229 [Drosophila persimilis]
gi|194111680|gb|EDW33723.1| GL13229 [Drosophila persimilis]
Length = 455
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 129 NLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIA 188
N I ++GD VP F P+ ++ + +G KPT IQ QG P ALSGRD++G+A
Sbjct: 127 NNEITIKGDQVPTPSIDFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGRDLVGVA 186
Query: 189 FTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 187 QTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQV 234
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++G+A TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 180 RDLVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQVA 235
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + TC+ GG P Q +++G++
Sbjct: 236 IEFGSNTHV-RNTCI-FGGAPKGQQARDLERGVE 267
>gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
Length = 690
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 149 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 208
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 209 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 264
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 265 YCRACRLKS 273
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 208 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 263
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 264 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 294
>gi|56090441|ref|NP_001007614.1| probable ATP-dependent RNA helicase DDX5 [Rattus norvegicus]
gi|354479420|ref|XP_003501908.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Cricetulus
griseus]
gi|50927691|gb|AAH79036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Rattus norvegicus]
gi|149054596|gb|EDM06413.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|149054597|gb|EDM06414.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|149054598|gb|EDM06415.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|344243055|gb|EGV99158.1| putative ATP-dependent RNA helicase DDX5 [Cricetulus griseus]
Length = 615
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|410915182|ref|XP_003971066.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Takifugu
rubripes]
Length = 1040
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/181 (33%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLD-VIKKGIQYNDPIKTSWRAPRCI 115
EL D ++Y + L+T L + L+ V + IQY K + +
Sbjct: 273 ELMENDQDAMEYSSEEEEVDLQTALTGFRTKQRKVLEPVDHEKIQYESYRKNFYVEVPEL 332
Query: 116 LSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ + + R L I+V+G P ++ + ++ AL+ G +KPTPIQ Q
Sbjct: 333 AKMSQEDVNAYRLELEGIIVKGKGCPKPIKTWVQCGVSMKILSALKKHGYEKPTPIQAQA 392
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q P EGP +I+ P+RELA
Sbjct: 393 IPAVMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEESEGPISVIMTPTRELAL 449
Query: 235 Q 235
Q
Sbjct: 450 Q 450
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q P EGP +I+ P+RELA Q
Sbjct: 398 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEESEGPISVIMTPTRELALQITKE 454
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + + P+ LR GG +++ + +K+G + + T R + + +V ++
Sbjct: 455 CKKF--SKPLGLRVVCVYGGTGISEQIAELKRGAEI--IVCTPGRMIDMLGANSGRVTNL 510
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESL-------------VRALEA---KGIKKPTP 169
R +L E D + ++M++ +S+ RA+EA + + KP
Sbjct: 511 RRVTYMVLDEADRMFDMGFEPQVMRIVDSVRPDRQTVMFSATFPRAMEALARRILNKPIE 570
Query: 170 IQVQG 174
+QV G
Sbjct: 571 VQVGG 575
>gi|325183171|emb|CCA17628.1| putative RNA helicase [Albugo laibachii Nc14]
Length = 1157
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 12/116 (10%)
Query: 121 QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
Q HDI G ++P +F P ++ + G +KPTPIQ QG P ALS
Sbjct: 737 QEHDIT-------THGKNIPRCVYTFEEASFPAYVLEEVMRLGFQKPTPIQCQGWPMALS 789
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
GRD++GI+ TGSGKTL F+LP ++ Q P L PG+GP LII P+RELA Q
Sbjct: 790 GRDMVGISATGSGKTLAFLLPAIVHINAQ----PHLEPGDGPIVLIIAPTRELAVQ 841
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GI+ TGSGKTL F+LP ++ Q P L PG+GP LII P+RELA Q
Sbjct: 789 SGRDMVGISATGSGKTLAFLLPAIVHINAQ----PHLEPGDGPIVLIIAPTRELAVQIQQ 844
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GGVP + +++G++
Sbjct: 845 EANKFGASSKIK-NTCV-YGGVPKYNQIMELRQGVE 878
>gi|432895747|ref|XP_004076142.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Oryzias
latipes]
Length = 1043
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + IQY +P + ++ P
Sbjct: 278 ELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKILEPVDHAKIQY-EPYRKNFYVEVPE 336
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
++V+ I+V+G P ++ + ++ AL+ +G KPTPIQ Q
Sbjct: 337 LAKMTTEEVNAYRLELEGIMVKGKGCPKPIKTWVQCGVSMKILSALKKQGYDKPTPIQAQ 396
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q P EGP +I+ P+RELA
Sbjct: 397 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEESEGPISVIMTPTRELA 453
Query: 234 RQTHDIIQYYCAAL 247
Q + + AL
Sbjct: 454 LQITKECKKFSKAL 467
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 31/189 (16%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q P EGP +I+ P+RELA Q
Sbjct: 403 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEESEGPISVIMTPTRELALQITKE 459
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQY---------------NDPIKTSWR 110
+ + AL LR GG +++ + +K+G + + + R
Sbjct: 460 CKKFSKAL--GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRR 517
Query: 111 APRCILSLPDQVHDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA---KGIK 165
A +L D++ D+ + +RI+ D+V P + + + RA+EA + +
Sbjct: 518 ATYVVLDEADRMFDMGFEPQVMRIV---DNVRP---DRQTVMFSATFPRAMEALARRILS 571
Query: 166 KPTPIQVQG 174
KP +QV G
Sbjct: 572 KPIEVQVGG 580
>gi|148906344|gb|ABR16327.1| unknown [Picea sitchensis]
Length = 504
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 76/132 (57%), Gaps = 8/132 (6%)
Query: 122 VHDIIR--RNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
D +R RN R I ++G DVP +F P+ ++ + G +PTPIQ QG P A
Sbjct: 74 TEDEVREYRNRREITIDGRDVPKPVKNFGDAGFPDYVIEEIVKAGFTEPTPIQAQGWPMA 133
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTH 237
L GRD+IGIA TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 134 LKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PYLAPGDGPIVLVLAPTRELAVQIQ 189
Query: 238 DIIQYYCAALPI 249
+ A+ I
Sbjct: 190 QEAAKFGASSKI 201
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 137 RDLIGIAETGSGKTLAYLLPAIVHVNAQ----PYLAPGDGPIVLVLAPTRELAVQIQQEA 192
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GG P + + KG++
Sbjct: 193 AKFGASSKIK-NTCI-YGGAPKGPQVRDLSKGVE 224
>gi|389630386|ref|XP_003712846.1| ATP-dependent RNA helicase DBP2 [Magnaporthe oryzae 70-15]
gi|152013478|sp|A4QSS5.1|DBP2_MAGO7 RecName: Full=ATP-dependent RNA helicase DBP2
gi|351645178|gb|EHA53039.1| ATP-dependent RNA helicase DBP2 [Magnaporthe oryzae 70-15]
Length = 548
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR + V+G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 105 DKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 164
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 165 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQAEISK 220
Query: 243 YCAALPI 249
+ + I
Sbjct: 221 FGKSSRI 227
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 161 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQA 216
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 217 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 250
>gi|442570033|sp|Q1DMX8.2|PRP28_COCIM RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
Length = 820
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G +P S+ LP+ L+ ++ G K P+PIQ IP AL RD+
Sbjct: 361 IFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDL 420
Query: 185 IGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 242
IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q + +
Sbjct: 421 IGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARK 480
Query: 243 YCAAL 247
+C L
Sbjct: 481 FCNPL 485
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 24/140 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHD 64
+RD+IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q +
Sbjct: 417 NRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIEN 476
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
+ +C P+ +GG + + ++ G + I++ P ++ D
Sbjct: 477 EARKFCN--PLGFNVVSIVGGHSLEEQSFSLRNGAE-------------IIIATPGRLVD 521
Query: 125 IIRRNLRILVEGDDVPPACC 144
I R + +L + CC
Sbjct: 522 CIERRILVLSQ-------CC 534
>gi|392866896|gb|EAS29922.2| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coccidioides
immitis RS]
Length = 827
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G +P S+ LP+ L+ ++ G K P+PIQ IP AL RD+
Sbjct: 368 IFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDL 427
Query: 185 IGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 242
IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q + +
Sbjct: 428 IGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARK 487
Query: 243 YCAAL 247
+C L
Sbjct: 488 FCNPL 492
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 24/140 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHD 64
+RD+IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q +
Sbjct: 424 NRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIEN 483
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
+ +C P+ +GG + + ++ G + I++ P ++ D
Sbjct: 484 EARKFCN--PLGFNVVSIVGGHSLEEQSFSLRNGAE-------------IIIATPGRLVD 528
Query: 125 IIRRNLRILVEGDDVPPACC 144
I R + +L + CC
Sbjct: 529 CIERRILVLSQ-------CC 541
>gi|320033151|gb|EFW15100.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coccidioides
posadasii str. Silveira]
Length = 820
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G +P S+ LP+ L+ ++ G K P+PIQ IP AL RD+
Sbjct: 361 IFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDL 420
Query: 185 IGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 242
IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q + +
Sbjct: 421 IGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARK 480
Query: 243 YCAAL 247
+C L
Sbjct: 481 FCNPL 485
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 24/140 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHD 64
+RD+IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q +
Sbjct: 417 NRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIEN 476
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
+ +C P+ +GG + + ++ G + I++ P ++ D
Sbjct: 477 EARKFCN--PLGFNVVSIVGGHSLEEQSFSLRNGAE-------------IIIATPGRLVD 521
Query: 125 IIRRNLRILVEGDDVPPACC 144
I R + +L + CC
Sbjct: 522 CIERRILVLSQ-------CC 534
>gi|303320765|ref|XP_003070377.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240110073|gb|EER28232.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 827
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G +P S+ LP+ L+ ++ G K P+PIQ IP AL RD+
Sbjct: 368 IFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDL 427
Query: 185 IGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 242
IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q + +
Sbjct: 428 IGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARK 487
Query: 243 YCAAL 247
+C L
Sbjct: 488 FCNPL 492
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 24/140 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHD 64
+RD+IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q +
Sbjct: 424 NRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIEN 483
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
+ +C P+ +GG + + ++ G + I++ P ++ D
Sbjct: 484 EARKFCN--PLGFNVVSIVGGHSLEEQSFSLRNGAE-------------IIIATPGRLVD 528
Query: 125 IIRRNLRILVEGDDVPPACC 144
I R + +L + CC
Sbjct: 529 CIERRILVLSQ-------CC 541
>gi|221483330|gb|EEE21649.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
gi|221507816|gb|EEE33403.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 550
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
++ I R N +V G +VP +F P ++ + G +KPT IQVQG P AL
Sbjct: 105 EEAERIRRANEITIVHGHNVPKPVPTFEYTSFPSYILDVINQTGFQKPTAIQVQGWPIAL 164
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 238
SGRD+IGIA TGSGKTL F+LP ++ Q P+L G+GP LI+ P+REL Q
Sbjct: 165 SGRDMIGIAETGSGKTLAFLLPAIVHINAQ----PYLNKGDGPIVLILAPTRELVEQIRA 220
Query: 239 IIQYYCAALPI 249
+ + A+ I
Sbjct: 221 QCRTFAASSKI 231
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD+IGIA TGSGKTL F+LP ++ Q P+L G+GP LI+ P+REL Q
Sbjct: 165 SGRDMIGIAETGSGKTLAFLLPAIVHINAQ----PYLNKGDGPIVLILAPTRELVEQIRA 220
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A+ I +A GGVP + +++G +
Sbjct: 221 QCRTFAASSKI--HHAVAYGGVPKRPQIMELERGAE 254
>gi|237839461|ref|XP_002369028.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211966692|gb|EEB01888.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
Length = 550
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
++ I R N +V G +VP +F P ++ + G +KPT IQVQG P AL
Sbjct: 105 EEAERIRRANEITIVHGHNVPKPVPTFEYTSFPSYILDVINQTGFQKPTAIQVQGWPIAL 164
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 238
SGRD+IGIA TGSGKTL F+LP ++ Q P+L G+GP LI+ P+REL Q
Sbjct: 165 SGRDMIGIAETGSGKTLAFLLPAIVHINAQ----PYLNKGDGPIVLILAPTRELVEQIRA 220
Query: 239 IIQYYCAALPI 249
+ + A+ I
Sbjct: 221 QCRTFAASSKI 231
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD+IGIA TGSGKTL F+LP ++ Q P+L G+GP LI+ P+REL Q
Sbjct: 165 SGRDMIGIAETGSGKTLAFLLPAIVHINAQ----PYLNKGDGPIVLILAPTRELVEQIRA 220
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A+ I +A GGVP + +++G +
Sbjct: 221 QCRTFAASSKI--HHAVAYGGVPKRPQIMELERGAE 254
>gi|119179097|ref|XP_001241172.1| hypothetical protein CIMG_08335 [Coccidioides immitis RS]
Length = 817
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G +P S+ LP+ L+ ++ G K P+PIQ IP AL RD+
Sbjct: 358 IFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDL 417
Query: 185 IGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 242
IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q + +
Sbjct: 418 IGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARK 477
Query: 243 YCAAL 247
+C L
Sbjct: 478 FCNPL 482
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 24/140 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHD 64
+RD+IG+A TGSGKT F+LP+L++ E + + + +GPY +I+ P+RELA+Q +
Sbjct: 414 NRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIEN 473
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
+ +C P+ +GG + + ++ G + I++ P ++ D
Sbjct: 474 EARKFCN--PLGFNVVSIVGGHSLEEQSFSLRNGAE-------------IIIATPGRLVD 518
Query: 125 IIRRNLRILVEGDDVPPACC 144
I R + +L + CC
Sbjct: 519 CIERRILVLSQ-------CC 531
>gi|62857657|ref|NP_001016781.1| DEAD (Asp-Glu-Ala-Asp) box helicase 17 [Xenopus (Silurana)
tropicalis]
Length = 609
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 123 HDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
HD+ +RR I + G + P F P+ ++ L + K+PTPIQ QG P ALS
Sbjct: 59 HDVEELRRKKEITIRGVNCPKPIYGFHQANFPQYVLDVLIDQRFKEPTPIQCQGFPLALS 118
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
GRD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 119 GRDMVGIAQTGSGKTLAYLLPAMVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQV 174
Query: 240 IQYYCAALPIGS 251
Y + + S
Sbjct: 175 ADDYGKSSRLKS 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 120 RDMVGIAQTGSGKTLAYLLPAMVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVA 175
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y + L++ GG P + +++G++
Sbjct: 176 DDYGKS--SRLKSTCIYGGAPKGPQIRDLERGVE 207
>gi|32450205|gb|AAH54236.1| LOC398649 protein, partial [Xenopus laevis]
Length = 415
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Query: 123 HDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
HD+ +RR I + G + P +F P+ ++ L + K+PTPIQ QG P ALS
Sbjct: 59 HDVEELRRKKEITIRGVNCPKPLYAFHQANFPQYVLDVLLDQRFKEPTPIQCQGFPLALS 118
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
GRD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 119 GRDMVGIAQTGSGKTLAYLLPAMVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQV 174
Query: 240 IQYY 243
Y
Sbjct: 175 ADDY 178
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 118 SGRDMVGIAQTGSGKTLAYLLPAMVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 173
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y L++ GG P + +++G++
Sbjct: 174 VADDYGKT--SRLKSTCIYGGAPKGPQIRDLERGVE 207
>gi|451996737|gb|EMD89203.1| hypothetical protein COCHEDRAFT_1141168 [Cochliobolus
heterostrophus C5]
Length = 539
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ ++ V+G ++P +F P ++ ++A+G KPT IQ QG P ALSGRD++G
Sbjct: 100 RKEHQMTVKGTNIPKPVTTFDEAGFPSYVMNEVKAQGFAKPTAIQAQGWPMALSGRDVVG 159
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYY 243
+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I +
Sbjct: 160 VAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISKF 213
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 153 SGRDVVGVAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQ 208
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 209 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLARGVE 242
>gi|297744770|emb|CBI38032.3| unnamed protein product [Vitis vinifera]
Length = 797
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 8/118 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I +G +P S+ KL L++A+E G K P+PIQ+ IP L RD+
Sbjct: 287 IFREDFNISYKGSKIPRPMRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQRDV 346
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTHD 238
IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q D
Sbjct: 347 IGIAETGSGKTAAFVLPMLTYI----SRLPPMSEENEAEGPYAVVMAPTRELAQQIED 400
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 344 RDVIGIAETGSGKTAAFVLPMLTYI----SRLPPMSEENEAEGPYAVVMAPTRELAQQIE 399
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 400 DETVKFAHYLGIKVVSI--VGGQSIEEQGFRIRQG 432
>gi|340905419|gb|EGS17787.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 615
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ I V G DVP +F P ++ ++A+G PT IQ QG P ALSGRD++G
Sbjct: 112 RRDHNITVSGRDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQAQGWPMALSGRDVVG 171
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYY 243
IA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I +
Sbjct: 172 IAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEINKF 225
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 165 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQ 220
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I TC+ GGVP + +++G++
Sbjct: 221 EINKFGKSSRI-RNTCI-YGGVPKGPQIRDLQRGVE 254
>gi|170029482|ref|XP_001842621.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
gi|167863205|gb|EDS26588.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
Length = 815
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + + ++G +P S++ P+ ++ ++ G K+PTPIQ Q IP L RDI
Sbjct: 368 IFREDYNVTIKGGKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPIGLQNRDI 427
Query: 185 IGIAFTGSGKTLVFVLPILMFCL------EQETKLPFLPGEGPYGLIICPSRELARQTHD 238
IGIA TGSGKTL F++P+L + QET +GPY +I+ P+RELA+Q +
Sbjct: 428 IGIAETGSGKTLAFLIPLLNWIQGLPKIERQETA-----DQGPYAIILAPTRELAQQIEE 482
Query: 239 IIQYYCAALPI 249
Q + L I
Sbjct: 483 ETQKFGQPLGI 493
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCL------EQETKLPFLPGEGPYGLIICPSRELAR 60
+RDIIGIA TGSGKTL F++P+L + QET +GPY +I+ P+RELA+
Sbjct: 424 NRDIIGIAETGSGKTLAFLIPLLNWIQGLPKIERQETA-----DQGPYAIILAPTRELAQ 478
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGGV 86
Q + Q + P+ +RT + +GG+
Sbjct: 479 QIEEETQKF--GQPLGIRTVVVVGGL 502
>gi|390595526|gb|EIN04931.1| RNA helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 434
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 89 NQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRL 148
+Q+L +K Y + + S R+ R I D RR + V+G VP SF
Sbjct: 50 SQALPKFEKNF-YVEDKRVSARSEREI--------DEFRRVQEMKVQGRGVPRPITSFEE 100
Query: 149 MKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLE 208
PE ++ +L A+G PT IQ Q P ALSGRD++ IA TGSGKTL F LP ++
Sbjct: 101 SGFPEYIMASLRAQGFSAPTAIQCQAWPMALSGRDLVAIAQTGSGKTLSFALPAMLHINA 160
Query: 209 QETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
Q P L PG+GP L++ P+RELA Q IQ C S
Sbjct: 161 Q----PLLQPGDGPIALVLAPTRELAVQ----IQQECTKFGTNS 196
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKTL F LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 132 SGRDLVAIAQTGSGKTLSFALPAMLHINAQ----PLLQPGDGPIALVLAPTRELAVQ--- 184
Query: 65 IIQYYCAALPIP--LRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C +R GG P + +++G++
Sbjct: 185 -IQQECTKFGTNSRIRNTAIYGGAPKGPQIRDLQRGVE 221
>gi|432871593|ref|XP_004071991.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Oryzias
latipes]
Length = 610
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
RR I V G P SF + P+ ++ L + K+PT IQ QG P ALSGRD++
Sbjct: 75 FRRKKEITVRGSGCPKPLTSFHQAQFPQYVIDVLMQQNFKEPTAIQAQGFPLALSGRDMV 134
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q + Y
Sbjct: 135 GIAQTGSGKTLAYLLPAIVHINHQ----PYLDRGDGPICLVLAPTRELAQQVQQVACDYG 190
Query: 245 AALPIGS 251
+ I S
Sbjct: 191 KSSRIKS 197
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 129 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLDRGDGPICLVLAPTRELAQQVQQ 184
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y + I TC+ GG P + +++G++
Sbjct: 185 VACDYGKSSRIK-STCV-YGGAPKGPQIRDLERGVE 218
>gi|402589428|gb|EJW83360.1| hypothetical protein WUBG_05727 [Wuchereria bancrofti]
Length = 373
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
+R +L + V G + P +F E+L+ + + PTPIQ Q IPAALSGRD++
Sbjct: 253 LRNSLNLKVAGFNPPKPVTAFAHFGFDEALMNVIRKSEYEHPTPIQSQSIPAALSGRDVL 312
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKT+ ++ P ++ ++Q P L G+GP L+I P+RELA Q + + YC
Sbjct: 313 GIAKTGSGKTVAYLWPAIVHIMDQ----PDLKEGDGPISLVIVPTRELALQVYQEAKRYC 368
Query: 245 AALPI 249
I
Sbjct: 369 KVYNI 373
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKT+ ++ P ++ ++Q P L G+GP L+I P+RELA Q +
Sbjct: 309 RDVLGIAKTGSGKTVAYLWPAIVHIMDQ----PDLKEGDGPISLVIVPTRELALQVYQEA 364
Query: 67 QYYCAALPI 75
+ YC I
Sbjct: 365 KRYCKVYNI 373
>gi|196012612|ref|XP_002116168.1| hypothetical protein TRIADDRAFT_30653 [Trichoplax adhaerens]
gi|190581123|gb|EDV21201.1| hypothetical protein TRIADDRAFT_30653 [Trichoplax adhaerens]
Length = 976
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 90 QSLDVIKKGIQYNDPIKTSW--RAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFR 147
+ ++++ Y P K ++ P ++ D+ + I V G P ++
Sbjct: 250 KDVNIVDHSKIYYAPFKRNFYVEVPELAKMTSEEADDVRLQLENIKVRGKGCPTPVKNWA 309
Query: 148 LMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCL 207
L L+ +L+ +KPTP+Q Q IP+ +SGRD+IGIA TGSGKTL F+LP+ L
Sbjct: 310 QCGLSVKLLDSLKRVKYEKPTPVQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHIL 369
Query: 208 EQETKLPFLPGEGPYGLIICPSRELARQ 235
+Q PG+GP GLI+ P+RELA Q
Sbjct: 370 DQNA---LSPGDGPIGLIMTPTRELAIQ 394
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP+ L+Q PG+GP GLI+ P+RELA Q
Sbjct: 342 SGRDVIGIAKTGSGKTLAFLLPMFRHILDQNA---LSPGDGPIGLIMTPTRELAIQITRE 398
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + A I + GG +++ + +K+G + + T R +L+ +V ++
Sbjct: 399 CRRFTKA--IGMHVVCVYGGTGISEQIAELKRGAEI--VVCTPGRMIDMLLANNGRVTNL 454
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESL----------------VRALEAKGIKKPTP 169
R +L E D + ++MK+ ES+ + AL K + KP
Sbjct: 455 RRVTYLVLDEADRMFDMGFEPQVMKIVESIRPDRQTVMFSATFPRQMEALARKMLTKPIE 514
Query: 170 IQVQG 174
I+V G
Sbjct: 515 IEVGG 519
>gi|417405652|gb|JAA49530.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 1033
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 284 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 342
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 343 -LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQS 401
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 402 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 458
Query: 233 ARQ 235
A Q
Sbjct: 459 ALQ 461
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 409 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 465
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 466 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 498
>gi|400601996|gb|EJP69621.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 1195
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V G DVP + L + ++ G +KPT IQ+Q IPA +SGRD+IG+A TG
Sbjct: 544 IKVNGKDVPKPVQKWAQCGLTRQTLDVIDNMGFEKPTSIQMQAIPALMSGRDVIGVAKTG 603
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
SGKT+ F+LP+ +Q P EGP GLI+ P+RELA Q H
Sbjct: 604 SGKTMAFLLPMFRHIKDQP---PLKESEGPVGLIMTPTRELATQIH 646
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P EGP GLI+ P+RELA Q H
Sbjct: 592 SGRDVIGVAKTGSGKTMAFLLPMFRHIKDQP---PLKESEGPVGLIMTPTRELATQIHRD 648
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + +R A GG P+ + +K+G +
Sbjct: 649 CKPFLKMM--GMRAVCAYGGAPIRDQIAELKRGAE 681
>gi|141796059|gb|AAI34864.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR I V G P SF + P+ ++ L + K+PT IQ QG P ALSGRD++G
Sbjct: 78 RRKREITVRGSGCPKPVTSFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVG 137
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q + Y
Sbjct: 138 IAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAFDYGK 193
Query: 246 ALPIGS 251
+ I S
Sbjct: 194 SSRIKS 199
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 131 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 186
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y + I TC+ GG P + +++G++
Sbjct: 187 VAFDYGKSSRIK-STCV-YGGAPKGPQIRDLERGVE 220
>gi|334310946|ref|XP_001370541.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Monodelphis domestica]
Length = 1179
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSW--RAPRC 114
EL D ++Y + L+T L + L+ + G +P + ++ P
Sbjct: 431 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPYRKNFYVEVPEL 490
Query: 115 ILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
D+V +I R + I V+G P ++ + ++ +L+ G +KPTPIQ Q
Sbjct: 491 AKMSQDEV-NIFRLEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQ 549
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q GEGP +I+ P+RELA
Sbjct: 550 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRA---LEEGEGPIAVIMTPTRELA 606
Query: 234 RQ 235
Q
Sbjct: 607 LQ 608
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q GEGP +I+ P+RELA Q
Sbjct: 556 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRA---LEEGEGPIAVIMTPTRELALQITKE 612
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 613 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 645
>gi|310789728|gb|EFQ25261.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 551
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 5/124 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR ++ V G+DVP +F P ++ ++A+G PT IQ QG P ALSGRD++G
Sbjct: 111 RRKHQMAVSGNDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVG 170
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I +
Sbjct: 171 IAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISKFGK 226
Query: 246 ALPI 249
+ I
Sbjct: 227 SSRI 230
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 166 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEI 221
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 222 SKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 253
>gi|126339554|ref|XP_001367967.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Monodelphis domestica]
Length = 772
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 193 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQNFTEPTPIQCQGFPLALSGR 252
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 253 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 308
Query: 242 YY 243
Y
Sbjct: 309 DY 310
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 250 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 305
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 306 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 339
>gi|427788853|gb|JAA59878.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 744
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR + + G D P +F+ P+ +R +EA+ K PT IQ QG P ALSGRD++G
Sbjct: 105 RRQHEMTLRGRDPPRPILTFQEGCFPDYCMRMIEAQNYKTPTAIQSQGWPIALSGRDMVG 164
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q + +
Sbjct: 165 IAQTGSGKTLAYILPAIVHITHQ----PYLQRGDGPVALVLAPTRELAQQIQQVASDFGK 220
Query: 246 ALPI 249
A I
Sbjct: 221 ASRI 224
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 160 RDMVGIAQTGSGKTLAYILPAIVHITHQ----PYLQRGDGPVALVLAPTRELAQQIQQVA 215
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A I R GG P L +++G++
Sbjct: 216 SDFGKASRI--RNTCVFGGAPKGAQLRDLERGVE 247
>gi|440799028|gb|ELR20089.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 682
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 99 IQYNDPIKTSWRAPRCILSLPD-QVHDIIRRNLRILVEG--DDVPPACCSFRLMKLPESL 155
I Y + + P + + + +VHD R+ I VEG +P +F +LP+ L
Sbjct: 169 IHYESFKRDFYVEPEEVTRMTEAEVHDY-RQMYDIRVEGAPQRIPRPAKAFEHFRLPDKL 227
Query: 156 VRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF 215
R +E +G PTP+Q Q +P + G D++ A TGSGKTL +VLP+L+ L+Q
Sbjct: 228 QREIERQGFGAPTPVQKQAVPCVMRGLDVVAQARTGSGKTLAYVLPMLVHLLDQPA---L 284
Query: 216 LPGEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
PG+GP +I+ P+RELA Q H + + + +
Sbjct: 285 APGDGPIAIILAPTRELAAQIHRETRKFAKRVNV 318
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 68
D++ A TGSGKTL +VLP+L+ L+Q PG+GP +I+ P+RELA Q H +
Sbjct: 255 DVVAQARTGSGKTLAYVLPMLVHLLDQPA---LAPGDGPIAIILAPTRELAAQIHRETRK 311
Query: 69 YCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A + +R GG +K G++
Sbjct: 312 F--AKRVNVRVGAVYGGKNTYDQAKELKAGVE 341
>gi|119895518|ref|XP_586902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|297477226|ref|XP_002689237.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|296485325|tpg|DAA27440.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Bos taurus]
Length = 1031
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
++V ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 342 LAKMSLEEV-NVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 497
>gi|302812625|ref|XP_002987999.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
gi|300144105|gb|EFJ10791.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
Length = 505
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
D+V D RR I V+G +VP SF P+ +++ + G K+PT IQ QG P AL
Sbjct: 62 DEVVDF-RRRKDITVQGRNVPKPVRSFAEASFPDYVLQEVLKAGFKEPTAIQAQGWPMAL 120
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 238
GRD++G+A TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 121 KGRDLVGLAETGSGKTLAYLLPAIVHVNAQ----PYLAPGDGPIVLVLAPTRELAVQIQQ 176
Query: 239 IIQYYCAALPIGS 251
+ ++ I S
Sbjct: 177 ESAKFGSSSKIKS 189
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++G+A TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 123 RDLVGLAETGSGKTLAYLLPAIVHVNAQ----PYLAPGDGPIVLVLAPTRELAVQIQQES 178
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ I TC+ GG P + +++G++
Sbjct: 179 AKFGSSSKIK-STCI-YGGAPKGPQIRDLQRGVE 210
>gi|157121045|ref|XP_001653747.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882993|gb|EAT47218.1| AAEL001657-PA [Aedes aegypti]
Length = 814
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 3/127 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G +P S+ P+ ++ ++ G K+PTPIQ Q IP L RDI
Sbjct: 367 IFREDYNITIKGGKIPNPFRSWSETGFPKEILDIIDKVGYKEPTPIQRQAIPIGLQNRDI 426
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL--PGEGPYGLIICPSRELARQTHDIIQY 242
IGIA TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q + Q
Sbjct: 427 IGIAETGSGKTLAFLIPLLTW-IQSLPKIDRLETADQGPYAIILAPTRELAQQIEEETQK 485
Query: 243 YCAALPI 249
+ L I
Sbjct: 486 FGQPLGI 492
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL--PGEGPYGLIICPSRELARQTHD 64
+RDIIGIA TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q +
Sbjct: 423 NRDIIGIAETGSGKTLAFLIPLLTW-IQSLPKIDRLETADQGPYAIILAPTRELAQQIEE 481
Query: 65 IIQYYCAALPIPLRTCLAIGGV 86
Q + P+ +RT + +GG+
Sbjct: 482 ETQKF--GQPLGIRTVVVVGGL 501
>gi|226490952|ref|NP_001152536.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|195657271|gb|ACG48103.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|224030151|gb|ACN34151.1| unknown [Zea mays]
gi|414872390|tpg|DAA50947.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 1 [Zea mays]
gi|414872391|tpg|DAA50948.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 2 [Zea mays]
Length = 758
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 8/118 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I +G +P + KL L+RA++ G +KP+PIQ+ IP L RD+
Sbjct: 318 IFREDFNISYKGSRIPRPMRKWSESKLGTELLRAIDKAGYEKPSPIQMAAIPLGLQQRDV 377
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP----GEGPYGLIICPSRELARQTHD 238
IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q +
Sbjct: 378 IGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQIEE 431
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 23/130 (17%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP----GEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 375 RDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQIE 430
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
+ + L I + +GG + + I++G + +++ P ++
Sbjct: 431 EETVKFATYLGI--KVVSIVGGQSIEEQGFKIRQGCE-------------IVIATPGRLL 475
Query: 124 DIIRRNLRIL 133
D + R +L
Sbjct: 476 DCLERRYAVL 485
>gi|395538171|ref|XP_003771058.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Sarcophilus
harrisii]
Length = 699
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 120 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQNFTEPTPIQCQGFPLALSGR 179
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 180 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 235
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 236 DYGKCSRL 243
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 177 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 232
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 233 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 266
>gi|384485449|gb|EIE77629.1| hypothetical protein RO3G_02333 [Rhizopus delemar RA 99-880]
Length = 1089
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 99 IQYNDPIKTSWRAPRCILSL-PDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLV 156
I+Y D K + P + + PDQV D++R L I + G + P + LP +
Sbjct: 407 IEYEDFRKDFYIEPPELREMTPDQV-DLLRIELDGIKIRGVNCPKPITKWTHCGLPVGCL 465
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+ +KPT IQ Q IPA ++GRD+IG+A TGSGKT+ F+LP+ +Q P
Sbjct: 466 EVIRKLKYEKPTAIQAQAIPAIMNGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLE 522
Query: 217 PGEGPYGLIICPSRELARQTH 237
GEGP +I+ P+RELA Q H
Sbjct: 523 AGEGPMAIIMTPTRELATQIH 543
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 23/185 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
N RD+IG+A TGSGKT+ F+LP+ +Q P GEGP +I+ P+RELA Q H
Sbjct: 489 NGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLEAGEGPMAIIMTPTRELATQIHKE 545
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + L LR A GG P+ + +K+G + + T R + + +V ++
Sbjct: 546 CKPFLKVL--NLRAVCAYGGSPIKDQIADLKRGCEI--IVCTPGRMIDLLCANSGRVTNL 601
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESL----------------VRALEAKGIKKPTP 169
R ++ E D + ++MK+ ++ + AL K +KKP
Sbjct: 602 RRVTYMVMDEADRMFDMGFEPQVMKIVNNVRPNRQTVLFSATFPRQMEALARKVLKKPLE 661
Query: 170 IQVQG 174
I V G
Sbjct: 662 ITVGG 666
>gi|346466927|gb|AEO33308.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 92 LDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKL 151
L IK+ + W + + + + ++ I R + I ++G +P + L
Sbjct: 107 LKKIKRKEEKQKWDDRHW-SHKSLEEMQERDWRIFREDFSITIKGGRIPNPLRKWSESGL 165
Query: 152 PESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQET 211
P S++ ++ G K PTPIQ Q IP L RDIIG+A TGSGKTL F+LP+L++ T
Sbjct: 166 PSSILDIIKELGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWI----T 221
Query: 212 KLPFLP-----GEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
LP + +GPY +I+ P+RELA+Q + + L I S
Sbjct: 222 SLPKIERQEDADQGPYAIIMAPTRELAQQIDEETTKFAKMLEIRS 266
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-----GEGPYGLIICPSRELAR 60
+RDIIG+A TGSGKTL F+LP+L++ T LP + +GPY +I+ P+RELA+
Sbjct: 194 QNRDIIGVAETGSGKTLAFLLPLLVWI----TSLPKIERQEDADQGPYAIIMAPTRELAQ 249
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGGVPMNQS 91
Q + + L I R+ IGG+ +
Sbjct: 250 QIDEETTKFAKMLEI--RSVAVIGGLSREEQ 278
>gi|270016294|gb|EFA12740.1| hypothetical protein TcasGA2_TC002367 [Tribolium castaneum]
Length = 668
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R I+V G+DVP F PE +++ + +G +PT IQ QG P LSGRD
Sbjct: 56 DSFREVKDIIVRGNDVPSPNLCFDEGNFPEYIMQVILKQGFAEPTAIQSQGWPVVLSGRD 115
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
++GIA TGSGKTL ++LP ++ Q+ GEGP LI+ P+RELA+Q + +
Sbjct: 116 LVGIAQTGSGKTLAYMLPAVVHINNQQRP---QRGEGPVALILAPTRELAQQIQKVAHEF 172
Query: 244 CAA 246
+
Sbjct: 173 GST 175
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++LP ++ Q+ GEGP LI+ P+RELA+Q +
Sbjct: 114 RDLVGIAQTGSGKTLAYMLPAVVHINNQQRP---QRGEGPVALILAPTRELAQQIQKVAH 170
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + TC+ GG P +++G++
Sbjct: 171 EFGSTTMV-RNTCI-FGGSPKGPQARDLERGVE 201
>gi|50293017|ref|XP_448941.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661092|sp|Q6FLF3.1|DBP2_CANGA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49528254|emb|CAG61911.1| unnamed protein product [Candida glabrata]
Length = 544
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ + DQ R+ + + G D+P +F P+ +++ ++A+G KPT IQ Q
Sbjct: 80 VVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQ 139
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSREL 232
G P ALSGRD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+REL
Sbjct: 140 GWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQ----PLLSPGDGPIVLVLAPTREL 195
Query: 233 ARQTHDIIQYYCAAL 247
A Q IQ C+
Sbjct: 196 AVQ----IQKECSKF 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 148 RDMVGIAATGSGKTLSYCLPGIVHINAQ----PLLSPGDGPIVLVLAPTRELAVQ----I 199
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C+ +R GGVP Q + + +G +
Sbjct: 200 QKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAE 235
>gi|380027508|ref|XP_003697465.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 607
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R N I ++GD++P F P ++ + +G +PT IQ QG P ALSGRD++
Sbjct: 95 FRENAEITIKGDNIPNPIQYFEEGNFPPYVLEEIHKQGYSQPTAIQAQGWPIALSGRDLV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYC 244
IA TGSGKTL +VLP ++ + Q P L G+GP LI+ P+RELA+Q ++ +
Sbjct: 155 AIAQTGSGKTLGYVLPAIVHIIHQ----PRLSNGDGPIALILAPTRELAQQIQEVANCFG 210
Query: 245 AALPI 249
A +
Sbjct: 211 EAAGV 215
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKTL +VLP ++ + Q P L G+GP LI+ P+RELA+Q ++
Sbjct: 151 RDLVAIAQTGSGKTLGYVLPAIVHIIHQ----PRLSNGDGPIALILAPTRELAQQIQEVA 206
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C +R GG P +++G++
Sbjct: 207 N--CFGEAAGVRNTCIFGGAPKGPQAHDLERGVE 238
>gi|302782315|ref|XP_002972931.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
gi|300159532|gb|EFJ26152.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
Length = 534
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
D+V D RR I V+G +VP SF P+ +++ + G K+PT IQ QG P AL
Sbjct: 67 DEVVDF-RRRKDITVQGRNVPKPVRSFAEASFPDYVLQEVLKAGFKEPTAIQAQGWPMAL 125
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 238
GRD++G+A TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 126 KGRDLVGLAETGSGKTLAYLLPAIVHVNAQ----PYLAPGDGPIVLVLAPTRELAVQIQQ 181
Query: 239 IIQYYCAALPIGS 251
+ ++ I S
Sbjct: 182 ESAKFGSSSKIKS 194
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++G+A TGSGKTL ++LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 128 RDLVGLAETGSGKTLAYLLPAIVHVNAQ----PYLAPGDGPIVLVLAPTRELAVQIQQES 183
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ I TC+ GG P + +++G++
Sbjct: 184 AKFGSSSKIK-STCI-YGGAPKGPQIRDLQRGVE 215
>gi|367051040|ref|XP_003655899.1| hypothetical protein THITE_2120154 [Thielavia terrestris NRRL 8126]
gi|347003163|gb|AEO69563.1| hypothetical protein THITE_2120154 [Thielavia terrestris NRRL 8126]
Length = 568
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 120 DKFRRDHAITVSGRDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 179
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 180 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 228
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q +
Sbjct: 178 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEM 233
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + +++G++
Sbjct: 234 TKFGKSSRI--RNTCVYGGVPKGPQIRDLQRGVE 265
>gi|322796814|gb|EFZ19232.1| hypothetical protein SINV_01003 [Solenopsis invicta]
Length = 1201
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R N I V+G+ VP F P ++ + +G +PTPIQ QG P ALSGRD++
Sbjct: 95 RENTEITVKGEHVPNPIQYFEEGNFPPYVMENIHREGYLRPTPIQAQGWPIALSGRDLVA 154
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
IA TGSGKTL ++LP ++ + Q G+GP LI+ P+RELA+Q ++
Sbjct: 155 IAQTGSGKTLGYILPAIVHIIHQPR---ISSGDGPIVLILAPTRELAQQIQEV 204
Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R N I V+G +VP F P+ ++ + +G +PT IQ QG P ALSGRD++G
Sbjct: 688 RSNKEITVKGANVPGPNIYFEEGGFPDYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMVG 747
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
IA TGSGKTL ++LP ++ Q P L +GP LI+ P+RELA+Q +
Sbjct: 748 IAQTGSGKTLAYILPAIVHINHQ----PRLSRNDGPIALILAPTRELAQQIQQV 797
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++ IA TGSGKTL ++LP ++ + Q G+GP LI+ P+RELA+Q ++
Sbjct: 148 SGRDLVAIAQTGSGKTLGYILPAIVHIIHQPR---ISSGDGPIVLILAPTRELAQQIQEV 204
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + TC+ GG P ++KGI+
Sbjct: 205 ANSF-GEMAAVRNTCI-FGGAPKGPQAHDLEKGIE 237
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P L +GP LI+ P+RELA+Q
Sbjct: 741 SGRDMVGIAQTGSGKTLAYILPAIVHINHQ----PRLSRNDGPIALILAPTRELAQQIQQ 796
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + +R GG P +++G++
Sbjct: 797 VASDF--GMSSQVRNTCIFGGAPKGPQARDLERGVE 830
>gi|148702365|gb|EDL34312.1| mCG2872, isoform CRA_b [Mus musculus]
gi|149054595|gb|EDM06412.1| ddx5 gene, isoform CRA_a [Rattus norvegicus]
Length = 406
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|238881065|gb|EEQ44703.1| hypothetical protein CAWG_02982 [Candida albicans WO-1]
Length = 514
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 87/148 (58%), Gaps = 7/148 (4%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRL 148
QS+D ++ Y + K +R + +L D+ ++IR++L I V+G DVP +
Sbjct: 240 QSIDHSQEN--YQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSH 297
Query: 149 MKLPESLVRALEAK-GIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCL 207
+ LP +L + K +KP+ IQ Q +P LSGRD+IGIA TGSGKTL +VLP+L
Sbjct: 298 LALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQ 357
Query: 208 EQETKLPFLPGEGPYGLIICPSRELARQ 235
+Q+ +GP GLI+ P+RELA Q
Sbjct: 358 DQQFS---KDNQGPIGLILSPTRELALQ 382
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL +VLP+L +Q+ +GP GLI+ P+RELA Q I
Sbjct: 332 RDVIGIAKTGSGKTLSYVLPMLRHIQDQQFS---KDNQGPIGLILSPTRELALQIEKEIL 388
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ LR C GG + ++ +KKG++
Sbjct: 389 NFTKR-NNSLRVCCCYGGSSIENQINELKKGVE 420
>gi|170040294|ref|XP_001847939.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167863866|gb|EDS27249.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 818
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + + ++G +P S++ P+ ++ ++ G K+PTPIQ Q IP L RDI
Sbjct: 371 IFREDYNVTIKGGKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPIGLQNRDI 430
Query: 185 IGIAFTGSGKTLVFVLPILMFCL------EQETKLPFLPGEGPYGLIICPSRELARQTHD 238
IGIA TGSGKTL F++P+L + QET +GPY +I+ P+RELA+Q +
Sbjct: 431 IGIAETGSGKTLAFLIPLLNWIQGLPKIERQETA-----DQGPYAIILAPTRELAQQIEE 485
Query: 239 IIQYYCAALPI 249
Q + L I
Sbjct: 486 ETQKFGQPLGI 496
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCL------EQETKLPFLPGEGPYGLIICPSRELAR 60
+RDIIGIA TGSGKTL F++P+L + QET +GPY +I+ P+RELA+
Sbjct: 427 NRDIIGIAETGSGKTLAFLIPLLNWIQGLPKIERQETA-----DQGPYAIILAPTRELAQ 481
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGGV 86
Q + Q + P+ +RT + +GG+
Sbjct: 482 QIEEETQKF--GQPLGIRTVVVVGGL 505
>gi|395146553|gb|AFN53706.1| putative dead box ATP-dependent RNA helicase [Linum usitatissimum]
Length = 1272
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 127 RRNLRILVEGDD-VPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ L I V+GDD VPP SF LP L++ +E+ G PTP+Q+Q IP LSG+ ++
Sbjct: 406 RKKLDIHVKGDDTVPPPMLSFSSWNLPSKLLQNIESAGFDVPTPVQMQAIPIGLSGKSLL 465
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
A TGSGKT F++PI+ C + L + P G+++ P+REL Q D
Sbjct: 466 ASAETGSGKTASFLVPIITCCSRHQN----LNRKKPLGIVLTPTRELCIQVED 514
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ + ++ A TGSGKT F++PI+ C + L + P G+++ P+REL Q D
Sbjct: 460 SGKSLLASAETGSGKTASFLVPIITCCSRHQN----LNRKKPLGIVLTPTRELCIQVED- 514
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q + +T L +GG M + +++G++
Sbjct: 515 -QAKLLGKGLLFKTALVVGGDAMAGQVHRLQQGVE 548
>gi|357118013|ref|XP_003560754.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Brachypodium distachyon]
gi|357118015|ref|XP_003560755.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Brachypodium distachyon]
Length = 734
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + I + ++ I R + I +G +P ++ KL L+RA++ G
Sbjct: 275 VDRHW-SEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPESKLGAELLRAIDKVGY 333
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
KKP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 334 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEG 389
Query: 221 PYGLIICPSRELARQTHDIIQYYCAALPI 249
PY +++ P+RELA+Q + + L I
Sbjct: 390 PYAVVMAPTRELAQQIEEETVKFATYLGI 418
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 351 RDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQIE 406
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + L I + + +GG + + I++G
Sbjct: 407 EETVKFATYLGIKVVSI--VGGQSIEEQGFKIRQG 439
>gi|348532716|ref|XP_003453852.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Oreochromis niloticus]
Length = 653
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
Query: 121 QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
+V D R+ I + G P +F + P+ ++ L + K+PT IQ QG PAALS
Sbjct: 73 EVEDF-RKRKEITIRGSGCPKPVTAFHHAQFPQYVMDVLMQQNFKEPTAIQSQGFPAALS 131
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
GRD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 132 GRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQV 187
Query: 240 IQYYCAALPIGS 251
Y + I S
Sbjct: 188 AYDYGKSSRIKS 199
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 133 RDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVA 188
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y + I TC+ GG P + +++G++
Sbjct: 189 YDYGKSSRIK-STCV-YGGAPKGPQIRDLERGVE 220
>gi|255561546|ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 714
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I +G +P S+ KL L++A+E G +KP+PIQ+ IP L RD+
Sbjct: 275 IFREDFNISYKGSKIPRPMRSWPESKLTPELLKAVERAGYEKPSPIQMAAIPLGLQQRDV 334
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q D
Sbjct: 335 IGIAETGSGKTAAFVLPMLTYI----SRLPPMSEDNEAEGPYAVVMAPTRELAQQIEDET 390
Query: 241 QYYCAALPI 249
+ L I
Sbjct: 391 VKFAHYLGI 399
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 332 RDVIGIAETGSGKTAAFVLPMLTYI----SRLPPMSEDNEAEGPYAVVMAPTRELAQQIE 387
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + +GG + + I++G
Sbjct: 388 DETVKFAHYLGI--KVVSIVGGQSIEEQGFRIRQG 420
>gi|402224487|gb|EJU04549.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 486
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 85/163 (52%), Gaps = 18/163 (11%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
Q+L+ +K Y + + S R R +V D RR + ++G VP +F
Sbjct: 16 QNLEKFEKNF-YVEDKRVSARTDR-------EVEDF-RRKHEMKIQGRGVPKPITTFEEA 66
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
P+ ++ ++A+G PTPIQ Q P ALSGRD++ IA TGSGKT+ F LP ++ Q
Sbjct: 67 GFPDYILTTIKAQGFAAPTPIQCQAWPMALSGRDVVAIAQTGSGKTIAFALPAMLHINAQ 126
Query: 210 ETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
P L PG+GP L++ P+RELA Q IQ C S
Sbjct: 127 ----PLLTPGDGPIALVLAPTRELAVQ----IQQECTKFGSNS 161
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 99 RDVVAIAQTGSGKTIAFALPAMLHINAQ----PLLTPGDGPIALVLAPTRELAVQ----I 150
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C +R GG P Q + +++G++
Sbjct: 151 QQECTKFGSNSRIRNTAVYGGAPKGQQIRDLQRGVE 186
>gi|390458842|ref|XP_002743821.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Callithrix
jacchus]
Length = 652
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|93587673|ref|NP_001035277.1| probable ATP-dependent RNA helicase DDX17 isoform 4 [Mus musculus]
gi|76364169|sp|Q501J6.1|DDX17_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX17; AltName:
Full=DEAD box protein 17
gi|63146347|gb|AAH96036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Mus musculus]
Length = 650
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|40068493|ref|NP_951062.1| probable ATP-dependent RNA helicase DDX17 isoform 1 [Mus musculus]
gi|74181626|dbj|BAE30078.1| unnamed protein product [Mus musculus]
gi|74220643|dbj|BAE31531.1| unnamed protein product [Mus musculus]
gi|148672698|gb|EDL04645.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_a [Mus
musculus]
Length = 652
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|385333348|ref|YP_005887299.1| DEAD/DEAH box helicase [Marinobacter adhaerens HP15]
gi|311696498|gb|ADP99371.1| DEAD/DEAH box helicase domain protein [Marinobacter adhaerens HP15]
Length = 440
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 144 CSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPIL 203
SF + L E LVRA +G + P+PIQ Q IPA LSGRD++ A TG+GKT F LP+L
Sbjct: 1 MSFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL 60
Query: 204 MFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALP 248
E G+GP LI+ P+RELA Q HD + Y +P
Sbjct: 61 QRLGENPR-----TGKGPRALILTPTRELAAQVHDSVNLYSKYIP 100
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++ A TG+GKT F LP+L E G+GP LI+ P+RELA Q HD +
Sbjct: 39 RDVMAAAQTGTGKTAGFTLPLLQRLGENPR-----TGKGPRALILTPTRELAAQVHDSVN 93
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGI 99
Y IP + + GGV +N + ++KG+
Sbjct: 94 LYSKY--IPTKAAVVFGGVKINPQMMKLRKGL 123
>gi|120538559|gb|AAI29874.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
Length = 615
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLKFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|221131953|ref|XP_002164829.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Hydra
magnipapillata]
Length = 674
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D+ R+ I V G ++P C SF + +P+ + AL K+PT IQ QG ALSGR+
Sbjct: 86 DMFRKTREISVVGRNIPKPCQSFDELCIPDYVGDALRKFNFKEPTAIQSQGFSVALSGRN 145
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
++GIA TGSGKT+ FVLP ++ Q P G+GP L++CP+RELA Q +
Sbjct: 146 MVGIAQTGSGKTISFVLPAVIHINNQP---PLNQGDGPICLVLCPTRELAIQVQSV 198
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
R+++GIA TGSGKT+ FVLP ++ Q P G+GP L++CP+RELA Q +
Sbjct: 144 RNMVGIAQTGSGKTISFVLPAVIHINNQP---PLNQGDGPICLVLCPTRELAIQVQSVAG 200
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ L +R+ GG + +++G +
Sbjct: 201 QF--GLTTRVRSTCIYGGASKGPQIRDLERGSE 231
>gi|156100409|ref|XP_001615932.1| helicase [Plasmodium vivax Sal-1]
gi|148804806|gb|EDL46205.1| helicase, putative [Plasmodium vivax]
Length = 528
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 121 QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
+V DI ++ ++EG+ VP S + P+ ++++L+ I PTPIQ+QG P ALS
Sbjct: 90 EVKDIRDKHRITILEGEGVPNPVESINKIGFPDYVLKSLKNNNIVTPTPIQIQGWPIALS 149
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
G+D+IG A TGSGKTL F+LP + L Q P L G+GP L++ P+RELA Q
Sbjct: 150 GKDMIGKAETGSGKTLAFILPAFVHILAQ----PSLKYGDGPIVLVMAPTRELAEQ---- 201
Query: 240 IQYYCAALPIGS 251
I+ C I S
Sbjct: 202 IRQECIKFSIES 213
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
+D+IG A TGSGKTL F+LP + L Q P L G+GP L++ P+RELA Q I
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQ----PSLKYGDGPIVLVMAPTRELAEQ----I 202
Query: 67 QYYCAALPI--PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ C I +R A GGVP + + +K+G+
Sbjct: 203 RQECIKFSIESKIRNTCAYGGVPKSGQIYALKQGVH 238
>gi|297261056|ref|XP_001092491.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Macaca
mulatta]
gi|297708870|ref|XP_002831174.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Pongo abelii]
gi|1592565|gb|AAC50787.1| DEAD-box protein p72 [Homo sapiens]
gi|119580650|gb|EAW60246.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_f [Homo
sapiens]
Length = 650
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|397501955|ref|XP_003821639.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Pan paniscus]
gi|402884232|ref|XP_003905591.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Papio anubis]
gi|410055919|ref|XP_525595.4| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 2 [Pan
troglodytes]
gi|426394473|ref|XP_004063520.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Gorilla
gorilla gorilla]
gi|47678395|emb|CAG30318.1| DDX17 [Homo sapiens]
gi|109451124|emb|CAK54423.1| DDX17 [synthetic construct]
gi|109451702|emb|CAK54722.1| DDX17 [synthetic construct]
gi|119580647|gb|EAW60243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_c [Homo
sapiens]
gi|208967743|dbj|BAG72517.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [synthetic construct]
Length = 652
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|410965551|ref|XP_004001562.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17 [Felis catus]
Length = 650
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|378733552|gb|EHY60011.1| ATP-dependent RNA helicase dbp2 [Exophiala dermatitidis NIH/UT8656]
Length = 538
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR I V+G +VP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 95 DEFRRKHEITVQGRNVPRPVETFDEAGFPSYVMNEVKAQGFTHPTAIQSQGWPMALSGRD 154
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 155 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 203
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 151 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQ 206
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + I R GGVP + + +G++
Sbjct: 207 EMTKFGKSSRI--RNTCVYGGVPKGGQIRDLARGVE 240
>gi|32880087|gb|AAP88874.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 17, 72kDa [synthetic
construct]
gi|61372130|gb|AAX43789.1| DEAD box polypeptide 17 [synthetic construct]
gi|61372139|gb|AAX43790.1| DEAD box polypeptide 17 [synthetic construct]
Length = 651
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|444717657|gb|ELW58482.1| putative ATP-dependent RNA helicase DDX17 [Tupaia chinensis]
Length = 653
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 72 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 131
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 132 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 187
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 188 DYGKCSRL 195
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 129 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 184
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 185 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 218
>gi|348511436|ref|XP_003443250.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Oreochromis niloticus]
Length = 627
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR I V G P SF + P+ ++ L + K+PT IQ QG P ALSGRD++G
Sbjct: 77 RRKKEITVRGSGCPKPVTSFHHAQFPQYVMDVLVQQNFKEPTAIQAQGFPLALSGRDMVG 136
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q + Y
Sbjct: 137 IAQTGSGKTLSYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAYDYGK 192
Query: 246 ALPIGS 251
+ I S
Sbjct: 193 SSRIKS 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 130 SGRDMVGIAQTGSGKTLSYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 185
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y + I TC+ GG P + +++G++
Sbjct: 186 VAYDYGKSSRIK-STCV-YGGAPKGPQIRDLERGVE 219
>gi|351699283|gb|EHB02202.1| Putative ATP-dependent RNA helicase DDX17 [Heterocephalus glaber]
Length = 650
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|242033243|ref|XP_002464016.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
gi|241917870|gb|EER91014.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
Length = 750
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P + KL L+RA++ G
Sbjct: 291 VDRHW-SEKALEEMTERDWRIFREDFNISYKGSRIPRPMRKWSESKLGTELLRAIDKAGY 349
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
+KP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 350 EKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEG 405
Query: 221 PYGLIICPSRELARQTHDIIQYYCAALPI 249
PY +++ P+RELA+Q + + L I
Sbjct: 406 PYAVVMAPTRELAQQIEEETVKFATYLGI 434
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 367 RDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQIE 422
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + L I + + +GG + + I++G
Sbjct: 423 EETVKFATYLGIKVVSI--VGGQSIEEQGFKIRQG 455
>gi|335287568|ref|XP_003126098.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Sus
scrofa]
Length = 652
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|198282005|ref|NP_001095463.1| probable ATP-dependent RNA helicase DDX17 [Bos taurus]
gi|154757449|gb|AAI51649.1| DDX17 protein [Bos taurus]
gi|296487004|tpg|DAA29117.1| TPA: DEAD box polypeptide 17 [Bos taurus]
Length = 650
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|149065924|gb|EDM15797.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_a [Rattus
norvegicus]
gi|344257977|gb|EGW14081.1| putative ATP-dependent RNA helicase DDX17 [Cricetulus griseus]
Length = 652
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|395819770|ref|XP_003783252.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Otolemur
garnettii]
Length = 652
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|358449520|ref|ZP_09160004.1| DEAD/DEAH box helicase domain-containing protein [Marinobacter
manganoxydans MnI7-9]
gi|357226275|gb|EHJ04756.1| DEAD/DEAH box helicase domain-containing protein [Marinobacter
manganoxydans MnI7-9]
Length = 440
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 144 CSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPIL 203
SF + L E LVRA +G + P+PIQ Q IPA LSGRD++ A TG+GKT F LP+L
Sbjct: 1 MSFSSLGLSEQLVRATSDQGYETPSPIQAQAIPAVLSGRDVMAAAQTGTGKTAGFTLPLL 60
Query: 204 MFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALP 248
E G+GP LI+ P+RELA Q HD + Y +P
Sbjct: 61 QRLGENPR-----TGKGPRALILTPTRELAAQVHDSVNLYSKYVP 100
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++ A TG+GKT F LP+L E G+GP LI+ P+RELA Q HD +
Sbjct: 39 RDVMAAAQTGTGKTAGFTLPLLQRLGENPR-----TGKGPRALILTPTRELAAQVHDSVN 93
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGI 99
Y +P + + GGV +N + ++KG+
Sbjct: 94 LYSKY--VPTKAAVVFGGVKINPQMMKLRKGL 123
>gi|52545677|emb|CAH10627.2| hypothetical protein [Homo sapiens]
Length = 652
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|355683242|gb|AER97060.1| DEAD box polypeptide 17 [Mustela putorius furo]
Length = 730
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 152 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 211
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 212 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 267
Query: 242 YY 243
Y
Sbjct: 268 DY 269
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 209 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 264
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 265 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 298
>gi|345777025|ref|XP_860668.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 11
[Canis lupus familiaris]
gi|431905181|gb|ELK10228.1| Putative ATP-dependent RNA helicase DDX17 [Pteropus alecto]
Length = 652
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|157126319|ref|XP_001654592.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882564|gb|EAT46789.1| AAEL002083-PA [Aedes aegypti]
Length = 699
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 130 LRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAF 189
L I ++G ++P F LP+ ++ +G KPT IQ QG+P ALSGRD++GIA
Sbjct: 108 LEITLKGRNIPRPSMEFEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQ 167
Query: 190 TGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
TGSGKTL ++ P L+ Q+ G+GP L++ P+RELA+Q +
Sbjct: 168 TGSGKTLAYIAPALVHITHQDQ---LRRGDGPIALVLAPTRELAQQIQQV 214
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 26/138 (18%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++ P L+ Q+ G+GP L++ P+RELA+Q +
Sbjct: 160 RDMVGIAQTGSGKTLAYIAPALVHITHQDQ---LRRGDGPIALVLAPTRELAQQIQQVAT 216
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIR 127
+ + TC+ GG P KG Q I+ R +++ P ++ D +
Sbjct: 217 DFGQRINAN-NTCV-FGGAP---------KGPQ----IRDLERGAEIVIATPGRLIDFLE 261
Query: 128 R---NLR-----ILVEGD 137
R NLR +L E D
Sbjct: 262 RGITNLRRCTYLVLDEAD 279
>gi|389585395|dbj|GAB68126.1| helicase [Plasmodium cynomolgi strain B]
Length = 465
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 121 QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
+V DI ++ ++EG+ VP S + P+ ++++L+ I PTPIQ+QG P ALS
Sbjct: 90 EVKDIRDKHRITILEGEGVPNPVESISKIGFPDYVLKSLKNNNIVTPTPIQIQGWPIALS 149
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
G+D+IG A TGSGKTL F+LP + L Q + L + G+GP L++ P+RELA Q
Sbjct: 150 GKDMIGKAETGSGKTLAFILPAFVHILAQPS-LKY--GDGPVVLVMAPTRELAEQ 201
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
+D+IG A TGSGKTL F+LP + L Q + L + G+GP L++ P+RELA Q I+
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPS-LKY--GDGPVVLVMAPTRELAEQ----IR 203
Query: 68 YYCAALPI--PLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAP-RCILSLPDQVHD 124
C I +R A GGVP + + +K+G+ P R I L V +
Sbjct: 204 QECIKFSIESKIRNTCAYGGVPKSGQIYALKQGVH------ILIACPGRLIDLLEQNVTN 257
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKL 151
++R +L E D + P C S K+
Sbjct: 258 LMRVTYLVLDEADKIAP-CTSREHEKI 283
>gi|308807146|ref|XP_003080884.1| DEAD box protein P68 (ISS) [Ostreococcus tauri]
gi|116059345|emb|CAL55052.1| DEAD box protein P68 (ISS) [Ostreococcus tauri]
Length = 571
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Query: 104 PIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDD----VPPACCSFRLMKLPESLVRAL 159
P+ +WR +L IR L + V+ +D P A SF M+L ++ +
Sbjct: 67 PVFAAWRPSARAEALTTAQATEIRERLGVTVDVEDGEPEAPSAIESFEDMELKRDILADI 126
Query: 160 EAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE 219
+ + KP+PIQ Q IP LSGRD++G A TGSGKT F +P++ L Q P G+
Sbjct: 127 KFREYDKPSPIQAQAIPVILSGRDVLGCAETGSGKTAAFSIPMIQHALNQ---APLRQGD 183
Query: 220 GPYGLIICPSRELARQ 235
GP+ +++ P+RELA+Q
Sbjct: 184 GPFAIVMAPTRELAQQ 199
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++G A TGSGKT F +P++ L Q P G+GP+ +++ P+RELA+Q
Sbjct: 147 SGRDVLGCAETGSGKTAAFSIPMIQHALNQ---APLRQGDGPFAIVMAPTRELAQQIETE 203
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + RT + +GG M++ +++ G+Q
Sbjct: 204 AKTFTRSSK-GFRTAIIVGGTNMSEQRSMLRGGVQ 237
>gi|398411885|ref|XP_003857276.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
gi|339477161|gb|EGP92252.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
Length = 1145
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/116 (42%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V G D+P + P ++ + + + PT IQ Q +PA +SGRD IGIA TG
Sbjct: 485 ITVHGVDIPKPITKWSQCGFPAQVIEVINEQKFENPTAIQSQALPALMSGRDTIGIAKTG 544
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
SGKTL F+LP+ +Q P EGP GLI+ P+RELA Q H + Y AL
Sbjct: 545 SGKTLAFILPMFRHIKDQR---PVANLEGPIGLIMAPTRELAVQIHRECKPYLKAL 597
Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD IGIA TGSGKTL F+LP+ +Q P EGP GLI+ P+RELA Q H
Sbjct: 533 SGRDTIGIAKTGSGKTLAFILPMFRHIKDQR---PVANLEGPIGLIMAPTRELAVQIHRE 589
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y AL LR A GG P+ + + +K+G +
Sbjct: 590 CKPYLKAL--GLRGVCAYGGAPIKEQIGELKRGAE 622
>gi|62088770|dbj|BAD92832.1| DEAD box polypeptide 17 isoform p82 variant [Homo sapiens]
Length = 737
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 152 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 211
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 212 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 267
Query: 242 YY 243
Y
Sbjct: 268 DY 269
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 209 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 264
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 265 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 298
>gi|410055921|ref|XP_003953938.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 1 [Pan
troglodytes]
Length = 642
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 63 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 122
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 123 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 178
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 179 DYGKCSRL 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 120 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 175
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 176 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 209
>gi|408391854|gb|EKJ71221.1| hypothetical protein FPSE_08584 [Fusarium pseudograminearum CS3096]
Length = 1192
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 103 DPI-KTSWRAPRCILSLPD-QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALE 160
+PI K W P + L + +V D+ I V G DVP + L + ++
Sbjct: 519 EPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVD 578
Query: 161 AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEG 220
G +KPTPIQ+Q +PA +SGRD+IG+A TGSGKT+ F+LP+ +Q P +G
Sbjct: 579 NLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP---PLKDTDG 635
Query: 221 PYGLIICPSRELARQTH 237
P GLI+ P+RELA Q H
Sbjct: 636 PIGLIMTPTRELAVQIH 652
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P +GP GLI+ P+RELA Q H
Sbjct: 598 SGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP---PLKDTDGPIGLIMTPTRELAVQIHKD 654
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + LR A GG P+ + + +K+G +
Sbjct: 655 CKPFLKMM--GLRAVCAYGGAPIREQIAELKRGAE 687
>gi|395333596|gb|EJF65973.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Dichomitus
squalens LYAD-421 SS1]
Length = 759
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G +P S+R +P ++ ++ G K+P+PIQ Q IP L RDI
Sbjct: 313 IFREDFSIAARGGQIPYPIRSWRESAIPVEILDIVDQIGYKEPSPIQRQAIPIGLQNRDI 372
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FV+P+L F +KLP + GPY LI+ P+RELA+Q
Sbjct: 373 IGIAETGSGKTAAFVIPMLAFI----SKLPPFTDDIRHLGPYALILAPTRELAQQIESET 428
Query: 241 QYYCAAL 247
+ + L
Sbjct: 429 KKFAGPL 435
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 23/133 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQT 62
+RDIIGIA TGSGKT FV+P+L F +KLP + GPY LI+ P+RELA+Q
Sbjct: 369 NRDIIGIAETGSGKTAAFVIPMLAFI----SKLPPFTDDIRHLGPYALILAPTRELAQQI 424
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQV 122
+ + A P+ + +GG + + ++ G + I++ P ++
Sbjct: 425 ESETKKF--AGPLGFTSVSIVGGRSVEEQQFNLRSGAE-------------IIIATPGRL 469
Query: 123 HDIIRRNLRILVE 135
D+I R++ +L +
Sbjct: 470 KDVIERHVIVLSQ 482
>gi|46108284|ref|XP_381200.1| hypothetical protein FG01024.1 [Gibberella zeae PH-1]
Length = 1227
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 103 DPI-KTSWRAPRCILSLPD-QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALE 160
+PI K W P + L + +V D+ I V G DVP + L + ++
Sbjct: 554 EPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVD 613
Query: 161 AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEG 220
G +KPTPIQ+Q +PA +SGRD+IG+A TGSGKT+ F+LP+ +Q P +G
Sbjct: 614 NLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP---PLKDTDG 670
Query: 221 PYGLIICPSRELARQTH 237
P GLI+ P+RELA Q H
Sbjct: 671 PIGLIMTPTRELAVQIH 687
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P +GP GLI+ P+RELA Q H
Sbjct: 633 SGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP---PLKDTDGPIGLIMTPTRELAVQIHKD 689
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + LR A GG P+ + + +K+G +
Sbjct: 690 CKPFLKMM--GLRAVCAYGGAPIREQIAELKRGAE 722
>gi|387542724|gb|AFJ71989.1| putative ATP-dependent RNA helicase DDX17 isoform 3 [Macaca
mulatta]
Length = 731
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 150 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 209
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 210 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 265
Query: 242 YY 243
Y
Sbjct: 266 DY 267
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 207 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 262
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 263 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 296
>gi|387540018|gb|AFJ70636.1| putative ATP-dependent RNA helicase DDX17 isoform 1 [Macaca
mulatta]
Length = 729
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 150 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 209
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 210 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 265
Query: 242 YY 243
Y
Sbjct: 266 DY 267
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 207 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 262
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 263 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 296
>gi|332231227|ref|XP_003264799.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 1
[Nomascus leucogenys]
Length = 644
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 63 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 122
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 123 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 178
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 179 DYGKCSRL 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 120 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 175
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 176 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 209
>gi|91092124|ref|XP_972501.1| PREDICTED: similar to DEAD-box RNA-dependent helicase p68
[Tribolium castaneum]
Length = 540
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 103 DPIKTSWRAPR-CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
+P K + P + + P + RR I ++G +P +F P+ ++ +
Sbjct: 49 EPFKKDFYVPHPNVTNRPSYEVEEWRREKEITLKGKCIPDLVFTFEEAGFPDYVMSEIRK 108
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
G K PTPIQ QG P ALSGRD++GIA TGSGKTL ++LP ++ Q L G+GP
Sbjct: 109 MGFKHPTPIQSQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINHQPR---LLRGDGP 165
Query: 222 YGLIICPSRELARQTHDI 239
L++ P+RELA+Q +
Sbjct: 166 IALVLAPTRELAQQIQQV 183
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 32/224 (14%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++LP ++ Q L G+GP L++ P+RELA+Q +
Sbjct: 129 RDMVGIASTGSGKTLSYILPAIVHINHQPR---LLRGDGPIALVLAPTRELAQQIQQVAT 185
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDII- 126
+ + I R GG P KG Q ND + +++ P ++ D +
Sbjct: 186 DFGRSSKI--RNTCVFGGAP---------KGPQANDLMD----GVEIVIATPGRLIDFLE 230
Query: 127 --RRNLR-----ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
R NLR +L E D + ++ K+ E + + P +VQ + A
Sbjct: 231 SNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVQALAAEF 290
Query: 180 SGRDIIGIAFTGSGKTLV--FVLPILMFC--LEQETKLPFLPGE 219
+D I I GS + +L I+ C E+ETKL L E
Sbjct: 291 L-KDYIQIN-VGSLQLSANHNILQIIDVCQEYEKETKLSTLLKE 332
>gi|426227120|ref|XP_004007674.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Ovis aries]
Length = 774
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 193 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 252
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 253 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 308
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 309 DYGKCSRL 316
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 250 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 305
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 306 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 339
>gi|328779178|ref|XP_623193.3| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Apis
mellifera]
Length = 588
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R N I ++GD++P F P ++ + +G +PT IQ QG P ALSGRD++
Sbjct: 95 FRENAEITIKGDNIPNPIQYFEEGNFPPYVLEEIHKQGYSQPTAIQAQGWPIALSGRDLV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYC 244
IA TGSGKTL +VLP ++ + Q P L G+GP LI+ P+RELA+Q ++ +
Sbjct: 155 AIAQTGSGKTLGYVLPAIVHIIHQ----PRLSNGDGPIALILAPTRELAQQIQEVANCFG 210
Query: 245 AALPI 249
A +
Sbjct: 211 EAAGV 215
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKTL +VLP ++ + Q P L G+GP LI+ P+RELA+Q ++
Sbjct: 151 RDLVAIAQTGSGKTLGYVLPAIVHIIHQ----PRLSNGDGPIALILAPTRELAQQIQEVA 206
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C +R GG P +++G++
Sbjct: 207 N--CFGEAAGVRNTCIFGGAPKGPQAHDLERGVE 238
>gi|355784988|gb|EHH65839.1| hypothetical protein EGM_02689, partial [Macaca fascicularis]
Length = 731
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 150 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 209
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 210 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 265
Query: 242 YY 243
Y
Sbjct: 266 DY 267
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 207 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 262
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 263 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 296
>gi|270004664|gb|EFA01112.1| hypothetical protein TcasGA2_TC010324 [Tribolium castaneum]
Length = 574
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 103 DPIKTSWRAPR-CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
+P K + P + + P + RR I ++G +P +F P+ ++ +
Sbjct: 89 EPFKKDFYVPHPNVTNRPSYEVEEWRREKEITLKGKCIPDLVFTFEEAGFPDYVMSEIRK 148
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
G K PTPIQ QG P ALSGRD++GIA TGSGKTL ++LP ++ Q L G+GP
Sbjct: 149 MGFKHPTPIQSQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINHQPR---LLRGDGP 205
Query: 222 YGLIICPSRELARQTHDI 239
L++ P+RELA+Q +
Sbjct: 206 IALVLAPTRELAQQIQQV 223
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 32/224 (14%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++LP ++ Q L G+GP L++ P+RELA+Q +
Sbjct: 169 RDMVGIASTGSGKTLSYILPAIVHINHQPR---LLRGDGPIALVLAPTRELAQQIQQVAT 225
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDII- 126
+ + I R GG P KG Q ND + +++ P ++ D +
Sbjct: 226 DFGRSSKI--RNTCVFGGAP---------KGPQANDLMD----GVEIVIATPGRLIDFLE 270
Query: 127 --RRNLR-----ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
R NLR +L E D + ++ K+ E + + P +VQ + A
Sbjct: 271 SNRTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVQALAAEF 330
Query: 180 SGRDIIGIAFTGSGKTLV--FVLPILMFC--LEQETKLPFLPGE 219
+D I I GS + +L I+ C E+ETKL L E
Sbjct: 331 L-KDYIQIN-VGSLQLSANHNILQIIDVCQEYEKETKLSTLLKE 372
>gi|159154994|gb|AAI54494.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR I V G P +F + P+ ++ L + K+PT IQ QG P ALSGRD++G
Sbjct: 78 RRKREITVRGSGCPKPVTNFHQAQFPQYVIDVLLQQNFKEPTAIQAQGFPLALSGRDMVG 137
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q + Y
Sbjct: 138 IAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAFDYGK 193
Query: 246 ALPIGS 251
+ I S
Sbjct: 194 SSRIKS 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 131 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 186
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y + I TC+ GG P + +++G++
Sbjct: 187 VAFDYGKSSRIK-STCV-YGGAPKGPQIRDLERGVE 220
>gi|148613856|ref|NP_001091974.1| probable ATP-dependent RNA helicase DDX17 isoform 3 [Homo sapiens]
Length = 731
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 150 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 209
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 210 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 265
Query: 242 YY 243
Y
Sbjct: 266 DY 267
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 207 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 262
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 263 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 296
>gi|38201710|ref|NP_006377.2| probable ATP-dependent RNA helicase DDX17 isoform 1 [Homo sapiens]
gi|380865374|sp|Q92841.2|DDX17_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX17; AltName:
Full=DEAD box protein 17; AltName: Full=DEAD box protein
p72; AltName: Full=RNA-dependent helicase p72
gi|110611789|gb|AAH00595.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Homo sapiens]
Length = 729
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 150 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 209
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 210 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 265
Query: 242 YY 243
Y
Sbjct: 266 DY 267
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 207 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 262
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 263 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 296
>gi|392576479|gb|EIW69610.1| hypothetical protein TREMEDRAFT_71685 [Tremella mesenterica DSM
1558]
Length = 1152
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I Y K + P +L + ++ +++R + I + G D P ++ LP +
Sbjct: 443 IDYEPFRKAFYNPPVEVLEMNEEETEMVRLMMDGIKIRGQDAPRPVRNWGAFGLPSGCLD 502
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
+ +KG + PTPIQ Q IPA +SGRD+IGIA TGSGKT+ F+LP+ +Q P
Sbjct: 503 VIRSKGWEHPTPIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPLFRHVKDQR---PVGG 559
Query: 218 GEGPYGLIICPSRELARQTH 237
EGP +++ P+RELA Q +
Sbjct: 560 AEGPIAIVMSPTRELALQIY 579
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ +Q P EGP +++ P+RELA Q
Sbjct: 525 SGRDVIGIAKTGSGKTVAFLLPLFRHVKDQR---PVGGAEGPIAIVMSPTRELALQ---- 577
Query: 66 IQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I C A P+ +R +GGV +++ + ++KKG +
Sbjct: 578 IYTECKAFIKPLNIRVACCVGGVTISEDIALMKKGAE 614
>gi|198463474|ref|XP_002135506.1| GA28589 [Drosophila pseudoobscura pseudoobscura]
gi|198151271|gb|EDY74133.1| GA28589 [Drosophila pseudoobscura pseudoobscura]
Length = 799
Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 5/112 (4%)
Query: 129 NLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIA 188
N I ++GD VP F P+ ++ + +G KPT IQ QG P ALSGRD++G+A
Sbjct: 127 NNEITIKGDQVPTPSIDFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGRDLVGVA 186
Query: 189 FTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 187 QTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQV 234
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q
Sbjct: 178 SGRDLVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQ 233
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + + R GG P Q +++G++
Sbjct: 234 VAIEFGSNTHV--RNTCIFGGAPKGQQARDLERGVE 267
>gi|440903013|gb|ELR53727.1| Putative ATP-dependent RNA helicase DDX17, partial [Bos grunniens
mutus]
Length = 731
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 150 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 209
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 210 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 265
Query: 242 YY 243
Y
Sbjct: 266 DY 267
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 207 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 262
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 263 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 296
>gi|410516921|sp|Q4IP34.2|PRP5_GIBZE RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
Length = 1207
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 103 DPI-KTSWRAPRCILSLPD-QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALE 160
+PI K W P + L + +V D+ I V G DVP + L + ++
Sbjct: 534 EPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVD 593
Query: 161 AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEG 220
G +KPTPIQ+Q +PA +SGRD+IG+A TGSGKT+ F+LP+ +Q P +G
Sbjct: 594 NLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP---PLKDTDG 650
Query: 221 PYGLIICPSRELARQTH 237
P GLI+ P+RELA Q H
Sbjct: 651 PIGLIMTPTRELAVQIH 667
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P +GP GLI+ P+RELA Q H
Sbjct: 613 SGRDVIGVAKTGSGKTVAFLLPMFRHIKDQP---PLKDTDGPIGLIMTPTRELAVQIHKD 669
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + LR A GG P+ + + +K+G +
Sbjct: 670 CKPFLKMM--GLRAVCAYGGAPIREQIAELKRGAE 702
>gi|392595702|gb|EIW85025.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coniophora
puteana RWD-64-598 SS2]
Length = 773
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G +P S+ ++PE ++ +E G K+P+PIQ Q IP L RD+
Sbjct: 304 IFREDFSIAARGGSIPHPLRSWAESEIPEIILGVIEQVGYKEPSPIQRQAIPIGLQNRDV 363
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FV+P+L F + +P + GPY LI+ P+RELA+Q
Sbjct: 364 IGIAETGSGKTAAFVIPMLTFI----STMPAFTDDNRHLGPYALILAPTRELAQQIEAEA 419
Query: 241 QYYCAALPIG 250
+ + A P+G
Sbjct: 420 RKF--ATPLG 427
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 27/135 (20%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQT 62
+RD+IGIA TGSGKT FV+P+L F + +P + GPY LI+ P+RELA+Q
Sbjct: 360 NRDVIGIAETGSGKTAAFVIPMLTFI----STMPAFTDDNRHLGPYALILAPTRELAQQ- 414
Query: 63 HDIIQYYCAALPIPLR-TCLAI-GGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPD 120
I+ PL TC++I GG + + +++G + I++ P
Sbjct: 415 ---IEAEARKFATPLGFTCVSIVGGRAVEEQQFNLREGAE-------------IIIATPG 458
Query: 121 QVHDIIRRNLRILVE 135
++ D++ R++ +L +
Sbjct: 459 RLKDVLERHVLVLSQ 473
>gi|241953695|ref|XP_002419569.1| pre-mRNA-processing ATP-dependent RNA helicase, putative [Candida
dubliniensis CD36]
gi|223642909|emb|CAX43164.1| pre-mRNA-processing ATP-dependent RNA helicase, putative [Candida
dubliniensis CD36]
Length = 873
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Query: 117 SLPDQVHDIIRRNL-RILVEGDDVPPACCSFRLMKLPESLVRALEAK-GIKKPTPIQVQG 174
SL ++ ++IR++L I V+G DVP + + LP +L + K +KP+ IQ Q
Sbjct: 253 SLSNEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQA 312
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELA 233
+P LSGRD+IGIA TGSGKTL +VLP+L +Q+ FL +GP GLI+ P+RELA
Sbjct: 313 LPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIHDQQ----FLKDNQGPIGLILSPTRELA 368
Query: 234 RQ 235
Q
Sbjct: 369 LQ 370
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQ 61
T + RD+IGIA TGSGKTL +VLP+L +Q+ FL +GP GLI+ P+RELA Q
Sbjct: 315 TILSGRDVIGIAKTGSGKTLSYVLPMLRHIHDQQ----FLKDNQGPIGLILSPTRELALQ 370
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + LR C GG + ++ +KKG++
Sbjct: 371 IEKEILNFTKKNNY-LRVCCCYGGSSIENQINELKKGVE 408
>gi|195492387|ref|XP_002093968.1| GE20460 [Drosophila yakuba]
gi|194180069|gb|EDW93680.1| GE20460 [Drosophila yakuba]
Length = 818
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I ++GD VP F P+ ++ + +G KPT IQ QG P ALSGRD++G+A TG
Sbjct: 144 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGRDLVGVAQTG 203
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
SGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 204 SGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQV 248
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q
Sbjct: 192 SGRDLVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQ 247
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + + R GG P Q +++G++
Sbjct: 248 VAIEFGSNTHV--RNTCIFGGAPKGQQARDLERGVE 281
>gi|343959846|dbj|BAK63780.1| probable ATP-dependent RNA helicase DDX17 [Pan troglodytes]
Length = 642
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 63 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 122
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 123 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 178
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 179 DYGKCSRL 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 120 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 175
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 176 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 209
>gi|119582643|gb|EAW62239.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_b [Homo
sapiens]
Length = 471
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 235 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 293
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
++V ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ
Sbjct: 294 LAKMSQEEV-NVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 352
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA +SGRD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+REL
Sbjct: 353 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTREL 409
Query: 233 ARQ 235
A Q
Sbjct: 410 ALQ 412
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 360 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 416
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 417 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 449
>gi|355563672|gb|EHH20234.1| hypothetical protein EGK_03044 [Macaca mulatta]
Length = 800
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 239 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 298
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 299 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 354
Query: 242 YY 243
Y
Sbjct: 355 DY 356
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 296 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 351
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 352 VADDYGKCSRLKS---TCI-YGGAPKGPQIRDLERGVE 385
>gi|301757526|ref|XP_002914626.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17-like [Ailuropoda melanoleuca]
Length = 775
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 194 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 253
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 254 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 309
Query: 242 YY 243
Y
Sbjct: 310 DY 311
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 251 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 306
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 307 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 340
>gi|242787406|ref|XP_002481000.1| RNA helicase (Dbp), putative [Talaromyces stipitatus ATCC 10500]
gi|218721147|gb|EED20566.1| RNA helicase (Dbp), putative [Talaromyces stipitatus ATCC 10500]
Length = 543
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ ++ V G +VP +F P ++ ++A+G KPT IQ QG P ALSGRD
Sbjct: 96 DAFRKEHQMAVTGRNVPRPVETFDEAGFPNYVLSEVKAQGFAKPTAIQSQGWPMALSGRD 155
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 156 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLSPGDGPIVLILAPTRELAVQIQTEISK 211
Query: 243 Y 243
+
Sbjct: 212 F 212
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 154 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLSPGDGPIVLILAPTRELAVQIQTEI 209
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 210 SKFGRSSRI--RNTCVYGGVPKGPQIRDLSRGVE 241
>gi|332031410|gb|EGI70923.1| Putative ATP-dependent RNA helicase DDX46 [Acromyrmex echinatior]
Length = 1013
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Query: 104 PIKTSW--RAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALE 160
P + S+ P P++V ++ + L I V+G P S+ + + + L+
Sbjct: 309 PFRKSFYVEVPEIARMTPEEV-EVYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLK 367
Query: 161 AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEG 220
G +KPTPIQ Q IPA +SGRD+IGIA TGSGKTL F+LP+ L+Q P G+G
Sbjct: 368 KLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDG 424
Query: 221 PYGLIICPSRELARQ 235
P LI+ P+REL Q
Sbjct: 425 PIALIMTPTRELCMQ 439
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 387 SGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQIGRD 443
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L + C+ GG +++ + +K+G +
Sbjct: 444 SKKFTKSLGLS-HVCV-YGGTGISEQIAELKRGAE 476
>gi|224068070|ref|XP_002188600.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Taeniopygia
guttata]
Length = 1031
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSW--RAPR 113
EL D ++Y + L+T L + L+ + G I+Y +P + ++ P
Sbjct: 283 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEY-EPFRKNFYVEVPE 341
Query: 114 CILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
++V ++ R L I V+G P ++ + ++ AL+ G +KPTPIQ
Sbjct: 342 LAKMTQEEV-NVYRLELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQT 400
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSREL 232
Q IPA ++GRD+IGIA TGSGKT+ F+LP+ ++Q GEGP +I+ P+REL
Sbjct: 401 QAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRA---LEEGEGPIAVIMTPTREL 457
Query: 233 ARQ 235
A Q
Sbjct: 458 ALQ 460
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
N RD+IGIA TGSGKT+ F+LP+ ++Q GEGP +I+ P+RELA Q
Sbjct: 408 NGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRA---LEEGEGPIAVIMTPTRELALQITKE 464
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQY---------------NDPIKTSWR 110
+ + L LR GG +++ + +K+G + N + R
Sbjct: 465 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRR 522
Query: 111 APRCILSLPDQVHDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA---KGIK 165
+L D++ D+ + +RI+ D+V P + + + RA+EA + +
Sbjct: 523 VTYVVLDEADRMFDMGFEPQVMRIV---DNVRP---DRQTVMFSATFPRAMEALARRILS 576
Query: 166 KPTPIQVQG 174
KP +QV G
Sbjct: 577 KPIEVQVGG 585
>gi|226510036|ref|NP_001147911.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|195614524|gb|ACG29092.1| ATP-dependent RNA helicase DDX23 [Zea mays]
Length = 736
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P + KL L+RA++ G
Sbjct: 277 VDRHW-SEKALEEMTERDWRIFREDFNISYKGSRIPRPMRKWSESKLGTELLRAIDKAGY 335
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
+KP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 336 EKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEG 391
Query: 221 PYGLIICPSRELARQTHD 238
PY +++ P+RELA+Q +
Sbjct: 392 PYAVVMAPTRELAQQIEE 409
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 351 QQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQ 406
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + L L+ +GG + + I++G
Sbjct: 407 IEEETVKFATYL--GLKVVSIVGGQSIEEQGFKIRQG 441
>gi|110739876|dbj|BAF01843.1| putative RNA helicase [Arabidopsis thaliana]
Length = 632
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R+ L + V G DVP + L ++ L+ +KP PIQ Q +P +SGRD IG
Sbjct: 345 RKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIG 404
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q + I+ + A
Sbjct: 405 VAKTGSGKTLGFVLPMLRHIKDQ---PPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKA 461
Query: 247 LPI 249
L I
Sbjct: 462 LGI 464
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD IG+A TGSGKTL FVLP+L +Q P G+GP GL++ P+REL +Q + I+
Sbjct: 400 RDCIGVAKTGSGKTLGFVLPMLRHIKDQ---PPVEAGDGPIGLVMAPTRELVQQIYSDIR 456
Query: 68 YYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
+ AL I C+ + GG + Q + +K+G +
Sbjct: 457 KFSKALGI---ICVPVYGGSGVAQQISELKRGTE 487
>gi|323448800|gb|EGB04694.1| hypothetical protein AURANDRAFT_70381 [Aureococcus anophagefferens]
Length = 544
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R + +I +EG VP +F +P+ ++ + +G K+P+PIQ QG P AL GRD
Sbjct: 129 DAWRTSKQIKIEGRGVPKPVSTFEEASMPDYVLTEVMKQGFKEPSPIQAQGWPMALLGRD 188
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
+IGI+ TGSGKTL F+LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 189 MIGISRTGSGKTLAFLLPGMIHINAQ----PYLQPGDGPIVLVLAPTRELAVQ 237
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IGI+ TGSGKTL F+LP ++ Q P+L PG+GP L++ P+RELA Q
Sbjct: 187 RDMIGISRTGSGKTLAFLLPGMIHINAQ----PYLQPGDGPIVLVLAPTRELAVQIKVEC 242
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I TC+ GG P +++G++
Sbjct: 243 DKFGASSQIK-NTCV-YGGAPKRTQTGDLQRGVE 274
>gi|58263430|ref|XP_569125.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108386|ref|XP_777144.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819236|sp|P0CQ99.1|PRP5_CRYNB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|338819237|sp|P0CQ98.1|PRP5_CRYNJ RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|50259829|gb|EAL22497.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223775|gb|AAW41818.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1072
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I Y K + P +L + ++ +++R + I + G D P ++ LP+ +
Sbjct: 357 IDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLD 416
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ +G + PT IQ Q IPA +SGRD+IGIA TGSGKT+ F+LP+L +Q P
Sbjct: 417 VIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQR---PVSG 473
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
EGP +++ P+RELA Q + Q + L I
Sbjct: 474 SEGPIAVVMSPTRELASQIYKECQPFLKVLNI 505
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+L +Q P EGP +++ P+RELA Q +
Sbjct: 439 SGRDVIGIAKTGSGKTVAFLLPMLRHVRDQR---PVSGSEGPIAVVMSPTRELASQIYKE 495
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q + L I C +GG +++ + +KKG +
Sbjct: 496 CQPFLKVLNIRASCC--VGGSSISEDIAAMKKGAE 528
>gi|19075356|ref|NP_587856.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe 972h-]
gi|48474674|sp|Q9P7C7.1|PRP11_SCHPO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp11
gi|7380876|emb|CAB85446.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe]
Length = 1014
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I Y D K + P + +L D +R +L I + G D P S+ L +
Sbjct: 372 INYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTIS 431
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
+ + G +KPT IQ Q IPA SGRD+IG+A TGSGKT+ F+LP+ +Q P
Sbjct: 432 VINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLKT 488
Query: 218 GEGPYGLIICPSRELARQ 235
GEGP +I+ P+RELA Q
Sbjct: 489 GEGPIAIIMTPTRELAVQ 506
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 23/185 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P GEGP +I+ P+RELA Q
Sbjct: 454 SGRDVIGVAKTGSGKTIAFLLPMFRHIKDQR---PLKTGEGPIAIIMTPTRELAVQIFRE 510
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + L I R C A GG P+ + +K+G + + T R + + +V ++
Sbjct: 511 CKPFLKLLNI--RACCAYGGAPIKDQIADLKRGAEI--VVCTPGRMIDVLSANAGRVTNL 566
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKL-----PE--------SLVRALEA---KGIKKPTP 169
R +L E D + ++M++ P+ + RA+EA K +KKP
Sbjct: 567 HRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVE 626
Query: 170 IQVQG 174
I V G
Sbjct: 627 ITVGG 631
>gi|350412504|ref|XP_003489670.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Bombus
impatiens]
Length = 605
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R N I ++GD++P F P ++ + +G +PT IQ QG P ALSGRD++
Sbjct: 95 FRENAEITIKGDNIPNPIQYFEEGNFPPYVLDEIHKQGYSQPTAIQAQGWPIALSGRDLV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
IA TGSGKTL +VLP ++ + Q P L G+GP LI+ P+RELA+Q ++ +
Sbjct: 155 AIAQTGSGKTLGYVLPAIVHIIHQ----PRLGNGDGPIALILAPTRELAQQIQEVANCFG 210
Query: 245 AALPI 249
A +
Sbjct: 211 EAAGV 215
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKTL +VLP ++ + Q P L G+GP LI+ P+RELA+Q ++
Sbjct: 151 RDLVAIAQTGSGKTLGYVLPAIVHIIHQ----PRLGNGDGPIALILAPTRELAQQIQEVA 206
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C +R GG P +++G++
Sbjct: 207 N--CFGEAAGVRNTCIFGGAPKGPQAHDLERGVE 238
>gi|218192669|gb|EEC75096.1| hypothetical protein OsI_11255 [Oryza sativa Indica Group]
Length = 1023
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 13/137 (9%)
Query: 109 WRAPRCILSLP-------DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
W + C + LP +V D ++ +L I V G DVP + SF P L+ A+
Sbjct: 190 WLSLSCSVYLPILAGMSEQEVADYMK-SLAIRVSGFDVPRSIKSFADCGFPVQLMNAIAK 248
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EG 220
+G +KPT IQ Q +P LSGRDIIGIA TGSGKT FVLP+++ ++Q P L EG
Sbjct: 249 QGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEG 304
Query: 221 PYGLIICPSRELARQTH 237
P G++ P+RELA Q +
Sbjct: 305 PIGVVCAPTRELAHQIY 321
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G++ P+RELA Q +
Sbjct: 267 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVVCAPTRELAHQIY- 321
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
++ A P LR GGV +K G
Sbjct: 322 -LEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAG 354
>gi|291389880|ref|XP_002711450.1| PREDICTED: DEAD box polypeptide 17 [Oryctolagus cuniculus]
Length = 835
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 254 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 313
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 314 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 369
Query: 242 YY 243
Y
Sbjct: 370 DY 371
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 311 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 366
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 367 VADDYGKCSRLKS---TCI-YGGAPKGPQIRDLERGVE 400
>gi|390598082|gb|EIN07481.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 752
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G +P S+ +P ++ +++ G K+P+PIQ Q IP L RD+
Sbjct: 302 IFREDFSIAARGGQIPHPLRSWEESDIPAQILEIVDSIGYKEPSPIQRQAIPIGLQNRDV 361
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FV+P+L F +KLP E GPY LI+ P+RELA+Q
Sbjct: 362 IGIAETGSGKTAAFVIPMLAFI----SKLPAFTEENRHLGPYALIMAPTRELAQQIESEA 417
Query: 241 QYYCAALPIG 250
+ + A P+G
Sbjct: 418 RKF--ATPLG 425
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 31/155 (20%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQ 61
+RD+IGIA TGSGKT FV+P+L F +KLP E GPY LI+ P+RELA+Q
Sbjct: 357 QNRDVIGIAETGSGKTAAFVIPMLAFI----SKLPAFTEENRHLGPYALIMAPTRELAQQ 412
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
+ + A P+ + +GG + + +++G + I++ P +
Sbjct: 413 IESEARKF--ATPLGYKCVSIVGGRAVEEQQFNLREGAE-------------IIIATPGR 457
Query: 122 VHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
+ D++ R++ +L + C + +M + +V
Sbjct: 458 LKDVLERHVLVLSQ--------CRYVVMDEADRMV 484
>gi|312376439|gb|EFR23520.1| hypothetical protein AND_12717 [Anopheles darlingi]
Length = 696
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ I +G ++P +F P ++ L G PTPIQ QG P ALSGRD++G
Sbjct: 79 RRSKEITTKGRELPDPIFTFEESGFPAEIIDELRYAGFTAPTPIQAQGWPIALSGRDMVG 138
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL +++P L+ ++Q+ +L G+GP LI+ P+RELA+Q + + A
Sbjct: 139 IAKTGSGKTLSYLIPALIH-IDQQPRLR--RGDGPIALILSPTRELAQQIKQVADDFGRA 195
Query: 247 L 247
L
Sbjct: 196 L 196
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKTL +++P L+ ++Q+ +L G+GP LI+ P+RELA+Q +
Sbjct: 132 SGRDMVGIAKTGSGKTLSYLIPALIH-IDQQPRLR--RGDGPIALILSPTRELAQQIKQV 188
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDV 94
+ AL TCL GG Q D+
Sbjct: 189 ADDFGRALKYK-NTCLFGGGKKRKQQEDL 216
>gi|134034065|sp|A2QC74.1|DBP2_ASPNC RecName: Full=ATP-dependent RNA helicase dbp2
gi|134056301|emb|CAK37534.1| unnamed protein product [Aspergillus niger]
Length = 565
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ + V+G +VP +F P+ ++ ++A+G +PT IQ QG P ALSGRD
Sbjct: 117 DEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRD 176
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 177 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQ 225
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 175 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQAEI 230
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 231 SKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 262
>gi|410921756|ref|XP_003974349.1| PREDICTED: probable ATP-dependent RNA helicase DDX59-like [Takifugu
rubripes]
Length = 628
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 43 PGE------GPYGLIICPSRELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIK 96
PGE G YG IC S + +D+ C A + ++ L GG N +
Sbjct: 99 PGEPVCVMCGRYGEYICDSTD-----NDVCSLECKARHL-VQMGLGTGGDVFNTKDNNED 152
Query: 97 KGIQY---------NDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFR 147
K Q S+R + I L D+ I++ L I +G + F
Sbjct: 153 KRTQQPAAHSRLRGGGETDYSYREDQFISGLTDEQVQRIKQELGIETQGSHITRPIVEFE 212
Query: 148 LMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCL 207
P +L L+ G + PTPIQ+Q +P L+GRD+I A TGSGKT+ F++P++ L
Sbjct: 213 HCGFPATLNSNLKKAGYEAPTPIQMQMVPVGLTGRDVIASADTGSGKTIAFLMPVVTRAL 272
Query: 208 EQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALP 248
++ P L +GP LI+ P+RELA Q + LP
Sbjct: 273 QK----PALSAKGPVALILTPTRELAIQIERQAKEVVMGLP 309
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+I A TGSGKT+ F++P++ L++ P L +GP LI+ P+RELA Q +
Sbjct: 247 RDVIASADTGSGKTIAFLMPVVTRALQK----PALSAKGPVALILTPTRELAIQIERQAK 302
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
LP +RT L +GG+P+ L +K+ I+
Sbjct: 303 EVVMGLP-NMRTALLVGGMPLPPQLHRLKQIIK 334
>gi|340725165|ref|XP_003400944.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
terrestris]
Length = 605
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R N I ++GD++P F P ++ + +G +PT IQ QG P ALSGRD++
Sbjct: 95 FRENAEITIKGDNIPNPIQYFEEGNFPPYVLDEIHKQGYSQPTAIQAQGWPIALSGRDLV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
IA TGSGKTL +VLP ++ + Q P L G+GP LI+ P+RELA+Q ++ +
Sbjct: 155 AIAQTGSGKTLGYVLPAIVHIIHQ----PRLGNGDGPIALILAPTRELAQQIQEVANCFG 210
Query: 245 AALPI 249
A +
Sbjct: 211 EAAGV 215
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKTL +VLP ++ + Q P L G+GP LI+ P+RELA+Q ++
Sbjct: 151 RDLVAIAQTGSGKTLGYVLPAIVHIIHQ----PRLGNGDGPIALILAPTRELAQQIQEVA 206
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C +R GG P +++G++
Sbjct: 207 N--CFGEAAGVRNTCIFGGAPKGPQAHDLERGVE 238
>gi|338721130|ref|XP_001916530.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Equus
caballus]
Length = 793
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 212 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 271
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 272 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 327
Query: 242 YY 243
Y
Sbjct: 328 DY 329
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 269 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 324
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 325 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 358
>gi|168034811|ref|XP_001769905.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168034871|ref|XP_001769935.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678811|gb|EDQ65265.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678841|gb|EDQ65295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 582
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 97 KGIQYNDPIKTSWRAPRCILSL-PDQVHDIIRRNLRILVE---GDDVPPA-CCSFRLMKL 151
+G + + + +W+ + L P+Q+ ++ R L + VE G + PA SF M L
Sbjct: 84 RGAGHPEVVWATWQPSERVQKLQPEQIAEV-RARLNVDVEIATGSEPAPAPIESFEDMCL 142
Query: 152 PESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQET 211
S+++ + PTPIQ Q +P ALSGRD++G A TGSGKT F LP++ CL Q
Sbjct: 143 HLSIMKDVTFHNYTTPTPIQAQALPVALSGRDLLGCAETGSGKTAAFSLPMIQHCLAQP- 201
Query: 212 KLPFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
P G+GP L++ P+RELA+Q ++ +C
Sbjct: 202 --PIRRGDGPLALVLAPTRELAQQIEKEVKAFC 232
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++G A TGSGKT F LP++ CL Q P G+GP L++ P+RELA+Q
Sbjct: 171 SGRDLLGCAETGSGKTAAFSLPMIQHCLAQP---PIRRGDGPLALVLAPTRELAQQIEKE 227
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ +C + RT + +GG + + ++ G++
Sbjct: 228 VKAFCRSAE-GFRTAIVVGGTNIYEQRSELRAGVE 261
>gi|410901955|ref|XP_003964460.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Takifugu
rubripes]
Length = 634
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR I + G P F P+ ++ L + K+PTPIQ QG P ALSGRD++G
Sbjct: 77 RRKKEITIRGSGCPKPIIKFHQAHFPQYVMDVLLEQNFKEPTPIQAQGFPLALSGRDMVG 136
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q + Y
Sbjct: 137 IAQTGSGKTLSYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAYDYGK 192
Query: 246 ALPIGS 251
+ I S
Sbjct: 193 SSRIKS 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 130 SGRDMVGIAQTGSGKTLSYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 185
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y + I TC+ GG P + +++G++
Sbjct: 186 VAYDYGKSSRIK-STCV-YGGAPKGPQIRDLERGVE 219
>gi|121715524|ref|XP_001275371.1| RNA helicase (Dbp), putative [Aspergillus clavatus NRRL 1]
gi|134034064|sp|A1C6C4.1|DBP2_ASPCL RecName: Full=ATP-dependent RNA helicase dbp2
gi|119403528|gb|EAW13945.1| RNA helicase (Dbp), putative [Aspergillus clavatus NRRL 1]
Length = 549
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ ++ V+G +VP +F P+ ++ ++++G ++PT IQ QG P ALSGRD
Sbjct: 105 DEFRQEHKMTVQGKNVPRPVETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRD 164
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 165 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQTEITK 220
Query: 243 YCAALPI 249
+ + I
Sbjct: 221 FGKSSRI 227
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 161 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQT 216
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 217 EITKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 250
>gi|317026711|ref|XP_001399394.2| ATP-dependent RNA helicase dbp2 [Aspergillus niger CBS 513.88]
Length = 564
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ + V+G +VP +F P+ ++ ++A+G +PT IQ QG P ALSGRD
Sbjct: 117 DEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRD 176
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 177 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQ 225
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 175 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQAEI 230
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 231 SKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 262
>gi|194865632|ref|XP_001971526.1| GG15018 [Drosophila erecta]
gi|190653309|gb|EDV50552.1| GG15018 [Drosophila erecta]
Length = 824
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I ++GD VP F P+ ++ + +G KPT IQ QG P ALSGRD++G+A TG
Sbjct: 145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGRDLVGVAQTG 204
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
SGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 205 SGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQV 249
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q
Sbjct: 193 SGRDLVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQ 248
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + + R GG P Q +++G++
Sbjct: 249 VAIEFGSNTHV--RNTCIFGGAPKGQQARDLERGVE 282
>gi|148229654|ref|NP_001084230.1| DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Xenopus laevis]
gi|8163810|gb|AAF73861.1|AF218580_1 p68 RNA helicase [Xenopus laevis]
Length = 608
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ A++ + +PTPIQ QG P ALSG D
Sbjct: 72 DQYRRSKEITVRGINCPKPILNFNEASFPANVMEAIKRQNFTEPTPIQGQGWPVALSGLD 131
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 132 MVGVAMTGSGKTLSYLLPGIVHINHQ----PFLQRGDGPILLVLAPTRELAQQVQQVAAE 187
Query: 243 YCAA 246
Y A
Sbjct: 188 YGRA 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGVAMTGSGKTLSYLLPGIVHINHQ----PFLQRGDGPILLVLAPTRELAQQVQQVAA 186
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A LR+ GG P + +++G++
Sbjct: 187 EYGRA--CRLRSTCIYGGAPKGPQIRDLERGVE 217
>gi|441617835|ref|XP_004088478.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 2
[Nomascus leucogenys]
Length = 420
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 63 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 122
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 123 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 178
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 179 DYGKCSRL 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 120 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 175
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 176 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 209
>gi|159463584|ref|XP_001690022.1| DEAD-box RNA helicase [Chlamydomonas reinhardtii]
gi|158284010|gb|EDP09760.1| DEAD-box RNA helicase [Chlamydomonas reinhardtii]
Length = 513
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P++V RR +I V GD VP +F PE ++ + G K+PTPIQ QG P A
Sbjct: 85 PEEVEQY-RREKQIHVYGDGVPKPVKTFEEASFPEYVLEEVLRAGFKEPTPIQCQGWPMA 143
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTH 237
L GRD+IG+A TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA Q
Sbjct: 144 LLGRDLIGLAETGSGKTLAYLLPAVVHINAQ----PYLQSGDGPIVLVLAPTRELAVQIQ 199
Query: 238 DIIQYYCAALPIGS 251
Q + A+ I +
Sbjct: 200 QECQRFGASSRIKN 213
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD+IG+A TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA Q
Sbjct: 147 RDLIGLAETGSGKTLAYLLPAVVHINAQ----PYLQSGDGPIVLVLAPTRELAVQIQQEC 202
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q + A+ I + + GG P ++ G++
Sbjct: 203 QRFGASSRI--KNTVVYGGAPKGPQARDLRGGVE 234
>gi|410076612|ref|XP_003955888.1| hypothetical protein KAFR_0B04560 [Kazachstania africana CBS 2517]
gi|372462471|emb|CCF56753.1| hypothetical protein KAFR_0B04560 [Kazachstania africana CBS 2517]
Length = 543
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + + G D+P +F P+ +++ ++A+G KPT IQ QG P ALSGRD++
Sbjct: 92 FRQENEMTISGHDIPKPITNFEEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMV 151
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q IQ C
Sbjct: 152 GIAATGSGKTLSYCLPGIVHINAQ----PLLSPGDGPIVLVLSPTRELAVQ----IQKEC 203
Query: 245 AAL 247
+
Sbjct: 204 SKF 206
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 148 RDMVGIAATGSGKTLSYCLPGIVHINAQ----PLLSPGDGPIVLVLSPTRELAVQ----I 199
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C+ +R GGVP Q + + +G +
Sbjct: 200 QKECSKFGHSSRIRNTCVYGGVPKGQQIRDLVRGAE 235
>gi|52430509|gb|AAH82849.1| DDX5 protein [Xenopus laevis]
Length = 608
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ A++ + +PTPIQ QG P ALSG D
Sbjct: 72 DQYRRSKEITVRGINCPKPILNFNEASFPANVMEAIKRQNFTEPTPIQGQGWPVALSGLD 131
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 132 MVGVAMTGSGKTLSYLLPGIVHINHQ----PFLQRGDGPILLVLAPTRELAQQVQQVAAE 187
Query: 243 YCAA 246
Y A
Sbjct: 188 YGRA 191
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGVAMTGSGKTLSYLLPGIVHINHQ----PFLQRGDGPILLVLAPTRELAQQVQQVAA 186
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A LR+ GG P + +++G++
Sbjct: 187 EYGRA--CRLRSTCIYGGAPKGPQIRDLERGVE 217
>gi|268573013|ref|XP_002641484.1| Hypothetical protein CBG09775 [Caenorhabditis briggsae]
Length = 814
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 121 QVHDIIR--RNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
Q DIIR + + V G P CSF + L+ A+ ++PTPIQ IP+A
Sbjct: 238 QYLDIIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSA 297
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTH 237
LSGRD++GIA TGSGKT ++ P ++ ++Q P L GEGP +I+ P+RELA Q +
Sbjct: 298 LSGRDVLGIAKTGSGKTAAYLWPAIVHTMDQ----PDLKEGEGPVAVIVVPTRELAIQVY 353
Query: 238 DIIQYYC 244
+ +C
Sbjct: 354 QEAKRFC 360
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKT ++ P ++ ++Q P L GEGP +I+ P+RELA Q +
Sbjct: 299 SGRDVLGIAKTGSGKTAAYLWPAIVHTMDQ----PDLKEGEGPVAVIVVPTRELAIQVYQ 354
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ +C I + C GG QS ++ +G +
Sbjct: 355 EAKRFCKVYNINV-ICAYGGGSKWEQSNELQNEGAE 389
>gi|358365783|dbj|GAA82405.1| RNA helicase Dbp [Aspergillus kawachii IFO 4308]
Length = 558
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ + V+G +VP +F P+ ++ ++A+G +PT IQ QG P ALSGRD
Sbjct: 114 DEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRD 173
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 174 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQ 222
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 172 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQAEI 227
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 228 SKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 259
>gi|223944961|gb|ACN26564.1| unknown [Zea mays]
gi|413933312|gb|AFW67863.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 734
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P + KL L+RA++ G
Sbjct: 275 VDRHW-SEKTLEEMTERDWRIFREDFNISYKGSRIPRPMRKWSESKLGTELLRAIDKAGY 333
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
+KP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + T+LP + EG
Sbjct: 334 EKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEG 389
Query: 221 PYGLIICPSRELARQTHD 238
PY +++ P+RELA+Q +
Sbjct: 390 PYAVVMAPTRELAQQIEE 407
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKT FVLP+L + T+LP + EGPY +++ P+RELA+Q
Sbjct: 349 QQRDVIGIAETGSGKTAAFVLPMLSYI----TRLPPISEENEAEGPYAVVMAPTRELAQQ 404
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + L L+ +GG + + I++G
Sbjct: 405 IEEETVKFATYL--GLKVVSIVGGQSIEEQGFKIRQG 439
>gi|167533855|ref|XP_001748606.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772847|gb|EDQ86493.1| predicted protein [Monosiga brevicollis MX1]
Length = 698
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 76/131 (58%), Gaps = 11/131 (8%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I +G ++PP S+ L +++A++ G + PTPIQ IP L+ RDI
Sbjct: 254 IFREDFNIACKGGNIPPPLRSWDEAGLNPEMLKAIQKLGFENPTPIQRAAIPIGLNNRDI 313
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE-----GPYGLIICPSRELARQTHDI 239
IG+A TGSGKTL FVLP+L + + LP L E GPY +I+ P+R+LA+Q D
Sbjct: 314 IGVAETGSGKTLAFVLPLLNWII----SLPQLVREQDIDNGPYAVILAPTRDLAQQIEDE 369
Query: 240 IQYYCAALPIG 250
+ A P+G
Sbjct: 370 ANKF--ARPLG 378
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 11/85 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE-----GPYGLIICPSRELAR 60
N+RDIIG+A TGSGKTL FVLP+L + + LP L E GPY +I+ P+R+LA+
Sbjct: 309 NNRDIIGVAETGSGKTLAFVLPLLNWII----SLPQLVREQDIDNGPYAVILAPTRDLAQ 364
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGG 85
Q D + A P+ +R IGG
Sbjct: 365 QIEDEANKF--ARPLGVRLVSVIGG 387
>gi|194381202|dbj|BAG64169.1| unnamed protein product [Homo sapiens]
Length = 420
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 63 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 122
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 123 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 178
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 179 DYGKCSRL 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 120 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 175
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 176 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 209
>gi|159477629|ref|XP_001696911.1| hypothetical protein CHLREDRAFT_176229 [Chlamydomonas reinhardtii]
gi|158274823|gb|EDP00603.1| predicted protein [Chlamydomonas reinhardtii]
Length = 435
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 154 SLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKL 213
L+ A++ G +KPTPIQ Q +P ALSGRD++GIA TGSGKT FVLP+L+ ++Q
Sbjct: 131 DLMAAIKKHGYEKPTPIQCQALPVALSGRDVLGIAKTGSGKTAAFVLPMLVHIMDQP--- 187
Query: 214 PFLPGEGPYGLIICPSRELARQTHDIIQYYC 244
GEGP GL++ P+RELA Q H + +
Sbjct: 188 ELAKGEGPIGLLVAPTRELAEQIHKETRRFS 218
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++GIA TGSGKT FVLP+L+ ++Q GEGP GL++ P+RELA Q H
Sbjct: 157 SGRDVLGIAKTGSGKTAAFVLPMLVHIMDQP---ELAKGEGPIGLLVAPTRELAEQIHKE 213
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + P LR A GG+ + +K G +
Sbjct: 214 TRRFSK--PYGLRVAAAFGGLSKYEQFKALKGGSE 246
>gi|154757438|gb|AAI51769.1| DDX17 protein [Bos taurus]
Length = 341
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|350539453|ref|NP_001234650.1| ethylene-responsive RNA helicase [Solanum lycopersicum]
gi|5669638|gb|AAD46404.1|AF096248_1 ethylene-responsive RNA helicase [Solanum lycopersicum]
Length = 474
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I +EG DVP SF + P+ +++ +E G +PTPIQ QG P AL GRD+IGIA TG
Sbjct: 84 ITIEGRDVPKPIKSFHDVGFPDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLIGIAETG 143
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
SGKT+ ++LP ++ Q P L G+GP L++ P+RELA Q + A+ I
Sbjct: 144 SGKTIAYLLPAIVHVNAQ----PILDHGDGPIVLVLAPTRELAVQIQQEATKFGASSRI 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD+IGIA TGSGKT+ ++LP ++ Q P L G+GP L++ P+RELA Q
Sbjct: 134 RDLIGIAETGSGKTIAYLLPAIVHVNAQ----PILDHGDGPIVLVLAPTRELAVQIQQEA 189
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDII 126
+ A+ I TC+ GGVP + ++KG++ I T P ++ + + H +
Sbjct: 190 TKFGASSRIK-NTCI-YGGVPKGPQVRDLQKGVEI--VIAT----PGRLIDMLESNHTNL 241
Query: 127 RRNLRILVEGD 137
RR +L E D
Sbjct: 242 RRVTIVLDEAD 252
>gi|350399327|ref|XP_003485490.1| PREDICTED: ATP-dependent RNA helicase p62-like [Bombus impatiens]
Length = 519
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 3/116 (2%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
DI R+ +I ++G+ +P F P+ +++ + +G +PT IQ QG P A+SG++
Sbjct: 80 DIFRQENQITLKGEKIPNPIQHFEEGNFPDHVMQCIRKQGFSEPTAIQAQGWPIAMSGQN 139
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
++GIA TGSGKTL ++LP ++ Q+ P G+GP L++ P+RELA+Q +
Sbjct: 140 MVGIAQTGSGKTLGYILPAIVHISSQQ---PLNHGDGPIALVLAPTRELAQQIQKV 192
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
++++GIA TGSGKTL ++LP ++ Q+ P G+GP L++ P+RELA+Q IQ
Sbjct: 138 QNMVGIAQTGSGKTLGYILPAIVHISSQQ---PLNHGDGPIALVLAPTRELAQQ----IQ 190
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
TC+ GG P +++G++
Sbjct: 191 KVTYNFGYVRSTCI-FGGAPKGSQARDLEQGVE 222
>gi|355750194|gb|EHH54532.1| hypothetical protein EGM_15393, partial [Macaca fascicularis]
Length = 1029
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/181 (32%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 57 ELARQTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG-IQYNDPIKTSWRAPRCI 115
EL D ++Y + L+T L + L+ + G I+Y K + +
Sbjct: 279 ELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYERFRKNFYVEVPEL 338
Query: 116 LSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ + ++ R + I V+G P S+ + ++ +L+ G +KPTPIQ Q
Sbjct: 339 AKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQA 398
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
IPA +SGRD+IGIA TGSGKT+ F+LP+ + Q + GEGP +I+ P+RELA
Sbjct: 399 IPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMGQRS---LEEGEGPIAVIMTPTRELAL 455
Query: 235 Q 235
Q
Sbjct: 456 Q 456
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 23/185 (12%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ + Q + GEGP +I+ P+RELA Q
Sbjct: 404 SGRDLIGIAKTGSGKTIAFLLPMFRHIMGQRS---LEEGEGPIAVIMTPTRELALQITKE 460
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDI 125
+ + L LR GG +++ + +K+G + + T R + + +V ++
Sbjct: 461 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAEI--IVCTPGRMIDMLAANSGRVTNL 516
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESL----------------VRALEAKGIKKPTP 169
R +L E D + ++M++ +++ + AL ++ + KP
Sbjct: 517 RRVTYVVLDEADRMFDMGFEPQVMRIVDNVHPDRQTVMFSATFPRAMEALTSRILSKPIE 576
Query: 170 IQVQG 174
+QV G
Sbjct: 577 VQVGG 581
>gi|119580646|gb|EAW60242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_b [Homo
sapiens]
Length = 418
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|74145393|dbj|BAE36146.1| unnamed protein product [Mus musculus]
Length = 418
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|367026670|ref|XP_003662619.1| hypothetical protein MYCTH_2303449 [Myceliophthora thermophila ATCC
42464]
gi|347009888|gb|AEO57374.1| hypothetical protein MYCTH_2303449 [Myceliophthora thermophila ATCC
42464]
Length = 552
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ I V G DVP +F P ++ ++A+G PT IQ QG P ALSGRD++G
Sbjct: 110 RRDHAITVSGRDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQAQGWPMALSGRDVVG 169
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYY 243
IA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I +
Sbjct: 170 IAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEITKF 223
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 163 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQ 218
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + +++G++
Sbjct: 219 EITKFGKSSRI--RNTCVYGGVPKGPQIRDLQRGVE 252
>gi|380483343|emb|CCF40681.1| ATP-dependent RNA helicase DBP2, partial [Colletotrichum
higginsianum]
Length = 420
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR +I + G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 112 EAFRRKHQIAIAGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 171
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 172 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISK 227
Query: 243 YCAALPI 249
+ + I
Sbjct: 228 FGKSSRI 234
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 168 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQ 223
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 224 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 257
>gi|350634363|gb|EHA22725.1| ATP-dependent RNA helicase of the DEAD-box protein family
[Aspergillus niger ATCC 1015]
Length = 547
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ + V+G +VP +F P+ ++ ++A+G +PT IQ QG P ALSGRD
Sbjct: 109 DEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRD 168
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 169 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQ 217
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 167 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQAEI 222
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 223 SKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 254
>gi|119580649|gb|EAW60245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_e [Homo
sapiens]
Length = 334
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|383854537|ref|XP_003702777.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Megachile rotundata]
Length = 1035
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 104 PIKTSW--RAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
P + S+ P P++V I V+G P S+ + + + L+
Sbjct: 331 PFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKK 390
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
G +KPTPIQ Q IPA +SGRD+IGIA TGSGKTL F+LP+ L+Q P G+GP
Sbjct: 391 LGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGP 447
Query: 222 YGLIICPSRELARQ 235
LI+ P+REL Q
Sbjct: 448 IALIMTPTRELCMQ 461
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 409 SGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQIGRD 465
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L + C+ GG +++ + +K+G +
Sbjct: 466 SKKFTKSLGLS-HVCV-YGGTGISEQIAELKRGAE 498
>gi|328786029|ref|XP_001122722.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Apis
mellifera]
Length = 1030
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 104 PIKTSW--RAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
P + S+ P P++V I V+G P S+ + + + L+
Sbjct: 326 PFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKK 385
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
G +KPTPIQ Q IPA +SGRD+IGIA TGSGKTL F+LP+ L+Q P G+GP
Sbjct: 386 LGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGP 442
Query: 222 YGLIICPSRELARQ 235
LI+ P+REL Q
Sbjct: 443 IALIMTPTRELCMQ 456
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 404 SGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQIGRD 460
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L + C+ GG +++ + +K+G +
Sbjct: 461 SKKFTKSLGLS-HVCV-YGGTGISEQIAELKRGAE 493
>gi|221059537|ref|XP_002260414.1| helicase [Plasmodium knowlesi strain H]
gi|193810487|emb|CAQ41681.1| helicase, putative [Plasmodium knowlesi strain H]
Length = 528
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRI-LVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
K ++ I +L + IR RI ++EG+ VP S + P+ ++++L+ I
Sbjct: 74 KNFYKEHHDISNLSSKEVKEIRDKHRITILEGEGVPNPVESISKIGFPDYVLKSLKNNNI 133
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYG 223
PTPIQ+QG P ALSG+D+IG A TGSGKTL F+LP + L Q P L G+GP
Sbjct: 134 VTPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQ----PSLKYGDGPIV 189
Query: 224 LIICPSRELARQTHDIIQYYCAALPIGS 251
L++ P+RELA Q I+ C + S
Sbjct: 190 LVLAPTRELAEQ----IRQECVKFSVES 213
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
+D+IG A TGSGKTL F+LP + L Q P L G+GP L++ P+RELA Q I
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQ----PSLKYGDGPIVLVLAPTRELAEQ----I 202
Query: 67 QYYCAALPI--PLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ C + +R A GGVP + + +K+G+
Sbjct: 203 RQECVKFSVESKIRNTCAYGGVPKSGQIYALKQGVH 238
>gi|426224567|ref|XP_004006440.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ovis aries]
Length = 820
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPVRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|412992467|emb|CCO18447.1| predicted protein [Bathycoccus prasinos]
Length = 818
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 49/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 100 QYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVP-PACCSFRLMKLPESLVRA 158
QY+ +T+ + + + + ++ I R + I +G VP P LP+ ++RA
Sbjct: 337 QYDKKKETTHWSSKPLAQMNERDWRIFREDFNITFKGGKVPNPMRAWSENELLPQEILRA 396
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+E G KP+PIQ+ IP L RD+IG+A TGSGKT FV+P+L + +
Sbjct: 397 IEKVGYTKPSPIQMASIPIGLLKRDVIGVAETGSGKTCAFVVPMLAHIMGLPKMTDEVAA 456
Query: 219 EGPYGLIICPSRELARQTHD 238
+GPY L++ P+RELA+Q +
Sbjct: 457 DGPYALVMAPTRELAQQIEE 476
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IG+A TGSGKT FV+P+L + + +GPY L++ P+RELA+Q +
Sbjct: 420 RDVIGVAETGSGKTCAFVVPMLAHIMGLPKMTDEVAADGPYALVMAPTRELAQQIEEETL 479
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIR 127
+ L R +GG + ++KG++ ++ P ++ D+I
Sbjct: 480 KFAHFL--GYRVACVVGGQSIEDQGVQLRKGVE-------------IVVGTPGRIIDVIE 524
Query: 128 RNLRIL 133
+ +L
Sbjct: 525 KRYTVL 530
>gi|195115088|ref|XP_002002099.1| GI14145 [Drosophila mojavensis]
gi|193912674|gb|EDW11541.1| GI14145 [Drosophila mojavensis]
Length = 837
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G +P S+ P ++ +++ G K+PTPIQ Q IP L RDI
Sbjct: 390 IFREDYNITIKGGKIPNPIRSWSESGFPPEIIEIIDSVGYKEPTPIQRQAIPIGLQNRDI 449
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP--GEGPYGLIICPSRELARQTHD 238
IG+A TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q +
Sbjct: 450 IGVAETGSGKTLAFLIPLLSW-IQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 504
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP--GEGPYGLIICPSRELARQT-H 63
+RDIIG+A TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q
Sbjct: 446 NRDIIGVAETGSGKTLAFLIPLLSW-IQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 504
Query: 64 DIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT + +GG+
Sbjct: 505 ETIKF---GQPLGIRTVVVVGGL 524
>gi|224010271|ref|XP_002294093.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220970110|gb|EED88448.1| atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 471
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 119 PDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAA 178
P+ R + +I++ G+ +P C +F +PE ++ + G KPTPIQ QG P A
Sbjct: 44 PETEAQAWRASKQIVIVGEGIPKPCMTFEEASMPEYVLSEVIKCGFDKPTPIQSQGWPMA 103
Query: 179 LSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHD 238
L G++++GI+ TGSGKTL F+LP ++ Q+ PGEGP L++ P+RELA Q +
Sbjct: 104 LKGKNMVGISATGSGKTLAFLLPAMIHINAQQY---LKPGEGPIVLVLAPTRELAVQIKE 160
Query: 239 IIQYYCAALPI 249
+ A+ I
Sbjct: 161 ECDKFGASSEI 171
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
++++GI+ TGSGKTL F+LP ++ Q+ PGEGP L++ P+RELA Q +
Sbjct: 107 KNMVGISATGSGKTLAFLLPAMIHINAQQY---LKPGEGPIVLVLAPTRELAVQIKEECD 163
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ A+ I + + GGVP ++ + +++G++
Sbjct: 164 KFGASSEI--KNTVVYGGVPKSKQVRSLREGVE 194
>gi|108742054|gb|AAI17661.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR I V G P +F + P+ ++ L + K+PT IQ QG P ALSGRD++G
Sbjct: 78 RRKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVG 137
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q + Y
Sbjct: 138 IAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAFDYGK 193
Query: 246 ALPIGS 251
+ I S
Sbjct: 194 SSRIKS 199
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 131 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 186
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y + I TC+ GG P + +++G++
Sbjct: 187 VAFDYGKSSRIK-STCV-YGGAPKGPQIRDLERGVE 220
>gi|38566035|gb|AAH62910.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Mus musculus]
Length = 407
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|255722413|ref|XP_002546141.1| hypothetical protein CTRG_00923 [Candida tropicalis MYA-3404]
gi|240136630|gb|EER36183.1| hypothetical protein CTRG_00923 [Candida tropicalis MYA-3404]
Length = 464
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 7/137 (5%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ S D+ D RR + +EG D+P SF P+ ++ L+ G KPT IQ QG
Sbjct: 98 VASRSDREIDQFRRENEMTIEGRDIPHPITSFDEAGFPDYVLSELKELGFPKPTAIQCQG 157
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 234
P ALSGRD++GIA TGSGKTL + LP ++ + + +L + G+GP L++ P+RELA
Sbjct: 158 WPMALSGRDMVGIAATGSGKTLSYCLPSIVH-INAQPELQY--GDGPIVLVLAPTRELAV 214
Query: 235 QTHDIIQYYCAALPIGS 251
Q IQ C+ S
Sbjct: 215 Q----IQTECSKFGKSS 227
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL + LP ++ + + +L + G+GP L++ P+RELA Q IQ
Sbjct: 165 RDMVGIAATGSGKTLSYCLPSIVH-INAQPELQY--GDGPIVLVLAPTRELAVQ----IQ 217
Query: 68 YYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C+ +R GG P + + KG++
Sbjct: 218 TECSKFGKSSRIRNTCVYGGAPKGPQIRDLNKGVE 252
>gi|226021|prf||1406327A growth regulated nuclear 68 protein
Length = 594
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 54 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 113
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 114 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 169
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 170 YCRACRLKS 178
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 113 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 168
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 169 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 199
>gi|348569510|ref|XP_003470541.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Cavia
porcellus]
Length = 407
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|40068491|ref|NP_951061.1| probable ATP-dependent RNA helicase DDX17 isoform 2 [Mus musculus]
gi|354505333|ref|XP_003514725.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Cricetulus
griseus]
gi|26333513|dbj|BAC30474.1| unnamed protein product [Mus musculus]
gi|148672699|gb|EDL04646.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_b [Mus
musculus]
Length = 407
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY--CAAL 247
Y C+ L
Sbjct: 187 DYGKCSRL 194
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y C+ L TC+ GG P + +++G++
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVE 217
>gi|348521007|ref|XP_003448018.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Oreochromis niloticus]
Length = 633
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
Query: 115 ILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQG 174
+ P Q + RR+ + V+G D P F P ++ + + +PTPIQ QG
Sbjct: 69 VTRRPLQEVEQYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQNWTEPTPIQSQG 128
Query: 175 IPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELA 233
P ALSG+D++GIA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA
Sbjct: 129 WPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQ----PFLEHGDGPICLVLAPTRELA 184
Query: 234 RQTHDIIQYYCAALPIGS 251
+Q + Y A + S
Sbjct: 185 QQVQQVAAEYGRASRLKS 202
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ +D++GIA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q
Sbjct: 134 SGKDMVGIAQTGSGKTLAYLLPAIVHIQHQ----PFLEHGDGPICLVLAPTRELAQQVQQ 189
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y A L++ GG P + +++G++
Sbjct: 190 VAAEYGRA--SRLKSTCIYGGAPKGPQIRDLERGVE 223
>gi|238493219|ref|XP_002377846.1| RNA helicase (Dbp), putative [Aspergillus flavus NRRL3357]
gi|317157028|ref|XP_001826178.2| ATP-dependent RNA helicase dbp2 [Aspergillus oryzae RIB40]
gi|220696340|gb|EED52682.1| RNA helicase (Dbp), putative [Aspergillus flavus NRRL3357]
gi|391864909|gb|EIT74201.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 556
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ + V+G ++P +F P+ ++ ++A+G ++PT IQ QG P ALSGRD
Sbjct: 112 DEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRD 171
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 172 VVGIAETGSGKTLSYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 220
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 170 RDVVGIAETGSGKTLSYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQAEI 225
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 226 TKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 257
>gi|443926925|gb|ELU45471.1| DEAD/DEAH box RNA helicase [Rhizoctonia solani AG-1 IA]
Length = 1540
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I+Y K + P + ++ D D++R +L I + G D P + LP S +
Sbjct: 854 IKYEPFRKAFYHPPPDVAAMTDDEADLLRLSLDGIKIRGLDCPKPVTKWSHCGLPSSCLD 913
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ G PT IQ Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +Q P
Sbjct: 914 VIKRLGYTAPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQR---PLET 970
Query: 218 GEGPYGLIICPSRELARQTH 237
EGP +++ P+RELA Q H
Sbjct: 971 MEGPMAIVMTPTRELAVQIH 990
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P EGP +++ P+RELA Q H
Sbjct: 936 SGRDVIGVAKTGSGKTIAFLLPLFRHIKDQR---PLETMEGPMAIVMTPTRELAVQIHRE 992
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 993 CKPFLKVL--NLRAVCAYGGSPIKDQIAEMKKGCE 1025
>gi|91206538|sp|Q2U070.1|DBP2_ASPOR RecName: Full=ATP-dependent RNA helicase dbp2
gi|83774922|dbj|BAE65045.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 554
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 71/113 (62%), Gaps = 5/113 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R+ + V+G ++P +F P+ ++ ++A+G ++PT IQ QG P ALSGRD
Sbjct: 110 DEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRD 169
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 170 VVGIAETGSGKTLSYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ 218
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 168 RDVVGIAETGSGKTLSYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQAEI 223
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 224 TKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 255
>gi|350596902|ref|XP_003126138.3| PREDICTED: probable ATP-dependent RNA helicase DDX23, partial [Sus
scrofa]
Length = 771
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +R IGG+
Sbjct: 484 IEEETIKF---GKPLGIRPVAVIGGI 506
>gi|340520139|gb|EGR50376.1| predicted protein [Trichoderma reesei QM6a]
Length = 547
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR ++ + G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 108 DEFRRKHQMTIAGRDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 167
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 168 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISK 223
Query: 243 Y 243
+
Sbjct: 224 F 224
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 164 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQ 219
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 220 EISKFGRSSRI--RNTCVYGGVPKGPQIRDLSRGVE 253
>gi|302685145|ref|XP_003032253.1| hypothetical protein SCHCODRAFT_82297 [Schizophyllum commune H4-8]
gi|300105946|gb|EFI97350.1| hypothetical protein SCHCODRAFT_82297 [Schizophyllum commune H4-8]
Length = 488
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 9/147 (6%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K ++ + + + ++ + RR+ I V+G VP SF + PE L+ + A+G
Sbjct: 23 KNFYQEDKRVTARSEREIEEFRRSKDIKVQGRGVPRPVTSFDEVGFPEYLMATIRAQGFP 82
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
PT IQ Q P ALSGRD++ IA TGSGKT+ F LP ++ Q P L PG+GP L
Sbjct: 83 APTAIQCQSWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLSPGDGPIAL 138
Query: 225 IICPSRELARQTHDIIQYYCAALPIGS 251
++ P+RELA Q IQ C S
Sbjct: 139 VLAPTRELAVQ----IQQECTKFGSNS 161
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 97 SGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLSPGDGPIALVLAPTRELAVQ--- 149
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C +R GG P + +++G++
Sbjct: 150 -IQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVE 186
>gi|456753028|gb|JAA74080.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Sus scrofa]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|449275677|gb|EMC84446.1| putative ATP-dependent RNA helicase DDX23 [Columba livia]
Length = 795
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 361 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 420
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 421 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 476
Query: 233 ARQTHD 238
A+Q +
Sbjct: 477 AQQIEE 482
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 424 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 479
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 480 IEEETIKF---GKPLGIRTVAVIGGI 502
>gi|444515387|gb|ELV10886.1| putative ATP-dependent RNA helicase DDX23 [Tupaia chinensis]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|431901383|gb|ELK08409.1| Putative ATP-dependent RNA helicase DDX23 [Pteropus alecto]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|156121051|ref|NP_001095672.1| probable ATP-dependent RNA helicase DDX23 [Bos taurus]
gi|151554096|gb|AAI47903.1| DDX23 protein [Bos taurus]
gi|296487810|tpg|DAA29923.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Bos taurus]
gi|440905541|gb|ELR55911.1| Putative ATP-dependent RNA helicase DDX23 [Bos grunniens mutus]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|73996608|ref|XP_851051.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2
[Canis lupus familiaris]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|41327771|ref|NP_004809.2| probable ATP-dependent RNA helicase DDX23 [Homo sapiens]
gi|397510970|ref|XP_003825856.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Pan paniscus]
gi|160385708|sp|Q9BUQ8.3|DDX23_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=100 kDa U5 snRNP-specific protein; AltName:
Full=DEAD box protein 23; AltName: Full=PRP28 homolog;
AltName: Full=U5-100kD
gi|12803125|gb|AAH02366.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapiens]
gi|119578415|gb|EAW58011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|119578419|gb|EAW58015.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|123981044|gb|ABM82351.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|123995847|gb|ABM85525.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|189065458|dbj|BAG35297.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|197100123|ref|NP_001125347.1| probable ATP-dependent RNA helicase DDX23 [Pongo abelii]
gi|67460452|sp|Q5RC67.1|DDX23_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=DEAD box protein 23
gi|55727779|emb|CAH90640.1| hypothetical protein [Pongo abelii]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|2655202|gb|AAB87902.1| U5 snRNP 100 kD protein [Homo sapiens]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|417404803|gb|JAA49138.1| Putative rna helicase [Desmodus rotundus]
Length = 818
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 363 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 422
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 423 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 478
Query: 233 ARQTHD 238
A+Q +
Sbjct: 479 AQQIEE 484
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 426 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 481
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 482 IEEETIKF---GKPLGIRTVAVIGGI 504
>gi|410964263|ref|XP_003988675.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Felis catus]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|403354220|gb|EJY76663.1| RNA helicase, putative [Oxytricha trifallax]
Length = 657
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEA-KGIKKPTPIQVQGIPAALSGRDIIGIAFT 190
I V+G +VP +F P+ ++ L+ +G KPTPIQ QG ALSGRD+IGIA T
Sbjct: 58 ITVKGTNVPRPLATFEEANFPKHIMDTLKTCEGFVKPTPIQSQGWSVALSGRDMIGIAET 117
Query: 191 GSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPIG 250
GSGKTL F+LP L+ QE +P G+GP L++ P+RELA Q + + A I
Sbjct: 118 GSGKTLSFLLPALVHVYAQE--VP-KRGDGPIALVLAPTRELAMQIETQCRKFAQACKIQ 174
Query: 251 S 251
S
Sbjct: 175 S 175
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IGIA TGSGKTL F+LP L+ QE +P G+GP L++ P+RELA Q +
Sbjct: 109 RDMIGIAETGSGKTLSFLLPALVHVYAQE--VP-KRGDGPIALVLAPTRELAMQIETQCR 165
Query: 68 YYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQ 100
+ A I LAI GGVP ++ ++ G++
Sbjct: 166 KFAQACKIQ---SLAIYGGVPKHEQKIALRAGVE 196
>gi|403296528|ref|XP_003939155.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Saimiri
boliviensis boliviensis]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|402885838|ref|XP_003906352.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Papio anubis]
Length = 818
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 363 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 422
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 423 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 478
Query: 233 ARQTHD 238
A+Q +
Sbjct: 479 AQQIEE 484
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 426 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 481
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 482 IEEETIKF---GKPLGIRTVAVIGGI 504
>gi|395841632|ref|XP_003793638.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Otolemur
garnettii]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|355683257|gb|AER97065.1| DEAD box polypeptide 23 [Mustela putorius furo]
Length = 818
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 424 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 479
Query: 233 ARQTHD 238
A+Q +
Sbjct: 480 AQQIEE 485
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 427 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 482
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 483 IEEETIKF---GKPLGIRTVAVIGGI 505
>gi|344267898|ref|XP_003405802.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Loxodonta
africana]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|354497364|ref|XP_003510790.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Cricetulus griseus]
gi|344254301|gb|EGW10405.1| putative ATP-dependent RNA helicase DDX23 [Cricetulus griseus]
Length = 819
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 424 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 479
Query: 233 ARQTHD 238
A+Q +
Sbjct: 480 AQQIEE 485
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 427 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 482
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 483 IEEETIKF---GKPLGIRTVAVIGGI 505
>gi|332206915|ref|XP_003252542.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23 [Nomascus leucogenys]
Length = 778
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|327264401|ref|XP_003217002.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Anolis
carolinensis]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|296211536|ref|XP_002752462.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Callithrix
jacchus]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|291389065|ref|XP_002711079.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Oryctolagus
cuniculus]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|301783663|ref|XP_002927245.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Ailuropoda melanoleuca]
gi|281343724|gb|EFB19308.1| hypothetical protein PANDA_017010 [Ailuropoda melanoleuca]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|158259303|dbj|BAF85610.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|149714248|ref|XP_001504169.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 1
[Equus caballus]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|114644988|ref|XP_509035.2| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2 [Pan
troglodytes]
gi|410219876|gb|JAA07157.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410251880|gb|JAA13907.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410291824|gb|JAA24512.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410334543|gb|JAA36218.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|386780941|ref|NP_001247801.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|380785261|gb|AFE64506.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|383409609|gb|AFH28018.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|384941744|gb|AFI34477.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGGI 506
>gi|261337192|ref|NP_001100263.2| probable ATP-dependent RNA helicase DDX23 [Rattus norvegicus]
gi|149032134|gb|EDL87046.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 819
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 424 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 479
Query: 233 ARQTHD 238
A+Q +
Sbjct: 480 AQQIEE 485
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 427 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 482
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 483 IEEETIKF---GKPLGIRTVAVIGGI 505
>gi|124430514|ref|NP_001074450.1| probable ATP-dependent RNA helicase DDX23 [Mus musculus]
gi|148672229|gb|EDL04176.1| mCG18410, isoform CRA_a [Mus musculus]
Length = 819
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 424 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 479
Query: 233 ARQTHD 238
A+Q +
Sbjct: 480 AQQIEE 485
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 427 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 482
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 483 IEEETIKF---GKPLGIRTVAVIGGI 505
>gi|193785886|dbj|BAG54673.1| unnamed protein product [Homo sapiens]
Length = 800
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 345 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 404
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 405 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 460
Query: 233 ARQTHD 238
A+Q +
Sbjct: 461 AQQIEE 466
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 408 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 463
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 464 IEEETIKF---GKPLGIRTVAVIGGI 486
>gi|355754295|gb|EHH58260.1| hypothetical protein EGM_08064, partial [Macaca fascicularis]
Length = 599
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 59 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 118
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 119 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 174
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 175 YCRACRLKS 183
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 118 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 173
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 174 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 204
>gi|123455589|ref|XP_001315537.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121898217|gb|EAY03314.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 598
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 138 DVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLV 197
DVP +F + LP+++ + + +KPTPIQ IP AL G D+IGIA TGSGKT
Sbjct: 119 DVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAA 178
Query: 198 FVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
F++P ++ QE P G+GP L++ P+RELA+Q ++ + +C L I
Sbjct: 179 FLIPAMVHIGLQE---PMYRGDGPIVLVLSPTRELAQQIAEVAKGFCDNLMI 227
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
D+IGIA TGSGKT F++P ++ QE P G+GP L++ P+RELA+Q ++ +
Sbjct: 163 HDLIGIAKTGSGKTAAFLIPAMVHIGLQE---PMYRGDGPIVLVLSPTRELAQQIAEVAK 219
Query: 68 YYCAALPIPLRTCLAIGGV 86
+C L I +TCL GG
Sbjct: 220 GFCDNLMI-RQTCL-FGGA 236
>gi|410900007|ref|XP_003963488.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Takifugu
rubripes]
Length = 802
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P +++ LP+ ++ ++ G K+PTPIQ Q IP
Sbjct: 346 MTDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPDHILEVIDKCGYKEPTPIQRQAIPI 405
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 406 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAVILAPTREL 461
Query: 233 ARQTHD 238
A+Q +
Sbjct: 462 AQQIEE 467
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 409 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAVILAPTRELAQQ 464
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 465 IEEETIKF---GKPLGIRTVAVIGGI 487
>gi|320170226|gb|EFW47125.1| ATP-dependent RNA helicase dbp2 [Capsaspora owczarzaki ATCC 30864]
Length = 562
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
Query: 114 CILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
+ ++ Q D RR+ + V G +VP +F P+ ++ L +G +KPT IQ Q
Sbjct: 155 AVSAMSQQEVDEFRRSREVTVNGRNVPKPVRTFEEAGFPDYVLSTLLQQGFEKPTTIQSQ 214
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
G P ALSG+D++GIA TGSGKTL + LP ++ Q T G+GP LI+ P+RELA
Sbjct: 215 GWPMALSGQDVVGIAATGSGKTLSYALPSIVHINAQPT---LQRGDGPIVLILAPTRELA 271
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 59
+D++GIA TGSGKTL + LP ++ Q T G+GP LI+ P+RELA
Sbjct: 223 QDVVGIAATGSGKTLSYALPSIVHINAQPT---LQRGDGPIVLILAPTRELA 271
>gi|307189252|gb|EFN73695.1| Probable ATP-dependent RNA helicase DDX46 [Camponotus floridanus]
Length = 1028
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Query: 104 PIKTSW--RAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALE 160
P + S+ P P++V ++ + L I V+G P S+ + + + L+
Sbjct: 324 PFRKSFYVEVPEIARMTPEEV-EMYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLK 382
Query: 161 AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEG 220
G +KPTPIQ Q IPA +SGRD+IGIA TGSGKTL F+LP+ L+Q P G+G
Sbjct: 383 KLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDG 439
Query: 221 PYGLIICPSRELARQ 235
P LI+ P+REL Q
Sbjct: 440 PIALIMTPTRELCMQ 454
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 402 SGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQIGRD 458
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L + C+ GG +++ + +K+G +
Sbjct: 459 SKKFTKSLGLS-HVCV-YGGTGISEQIAELKRGAE 491
>gi|342887883|gb|EGU87311.1| hypothetical protein FOXB_02187 [Fusarium oxysporum Fo5176]
Length = 1214
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V G DVP + L + ++ G +KPTPIQ+Q +PA +SGRD+IG+A TG
Sbjct: 572 IKVNGKDVPKPVQKWAQCGLTRQTLDVIDNLGFEKPTPIQMQALPALMSGRDVIGVAKTG 631
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTH 237
SGKT+ F+LP+ +Q P +GP GLI+ P+RELA Q H
Sbjct: 632 SGKTMAFLLPMFRHIKDQP---PLKDTDGPIGLIMTPTRELAVQIH 674
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P +GP GLI+ P+RELA Q H
Sbjct: 620 SGRDVIGVAKTGSGKTMAFLLPMFRHIKDQP---PLKDTDGPIGLIMTPTRELAVQIHRD 676
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + LR+ A GG P+ + +K+G +
Sbjct: 677 CKPFLKMM--GLRSVCAYGGAPIRDQIAELKRGAE 709
>gi|384498852|gb|EIE89343.1| hypothetical protein RO3G_14054 [Rhizopus delemar RA 99-880]
Length = 754
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 12/138 (8%)
Query: 106 KTSWRAPRCILSLPDQVHD----IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA 161
KT W +Q+ + I + + I +G ++P S++ LP+ +++ ++
Sbjct: 288 KTKWDERHWTEKPLNQMKERDWRIFKEDFNISTKGGNIPHPLRSWKESGLPDKMLQIIDD 347
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE-- 219
G K+PTPIQ Q IP + RD+IGIA TGSGKT FV+P+L++ + LP + E
Sbjct: 348 IGYKEPTPIQRQAIPIGIQNRDLIGIAETGSGKTASFVIPLLVYI----SDLPKMSEENM 403
Query: 220 --GPYGLIICPSRELARQ 235
GPY LI+ P+RELA+Q
Sbjct: 404 SDGPYALILAPTRELAQQ 421
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 12/84 (14%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQ- 61
+RD+IGIA TGSGKT FV+P+L++ + LP + E GPY LI+ P+RELA+Q
Sbjct: 367 NRDLIGIAETGSGKTASFVIPLLVYI----SDLPKMSEENMSDGPYALILAPTRELAQQI 422
Query: 62 THDIIQYYCAALPIPLRTCLAIGG 85
+ +++ A P+ IGG
Sbjct: 423 EQETVKF---ASPMGFNCVSIIGG 443
>gi|307173398|gb|EFN64357.1| Probable ATP-dependent RNA helicase DDX5 [Camponotus floridanus]
Length = 639
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R N I V+G++VP F P ++ + +G +PTPIQ QG P ALSGRD++
Sbjct: 120 FRENAEITVKGENVPNPIQYFEEGNFPPYVMEGIRRQGYSQPTPIQAQGWPIALSGRDLV 179
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
IA TGSGKTL ++LP ++ + Q P L G+GP L++ P+RELA+Q ++
Sbjct: 180 AIAQTGSGKTLGYILPAIVHIIHQ----PRLSNGDGPIVLVLAPTRELAQQIQEV 230
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKTL ++LP ++ + Q P L G+GP L++ P+RELA+Q ++
Sbjct: 176 RDLVAIAQTGSGKTLGYILPAIVHIIHQ----PRLSNGDGPIVLVLAPTRELAQQIQEVA 231
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
C +R GG P +++GI+
Sbjct: 232 N--CFGETAAVRNTCIFGGAPKGPQAHDLERGIE 263
>gi|410926900|ref|XP_003976906.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Takifugu
rubripes]
Length = 632
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 13/152 (8%)
Query: 101 YNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALE 160
Y + TS R P+ I + RR+ + V+G D P F P ++ +
Sbjct: 60 YQEHPDTSRRPPQEI--------EQYRRSKEVTVKGRDCPKPILKFHEAAFPSYVMEVIS 111
Query: 161 AKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GE 219
+ PTPIQ QG P AL G+D++GIA TGSGKTL ++LP ++ Q PFL G+
Sbjct: 112 KQNWTDPTPIQSQGWPVALGGKDMVGIAQTGSGKTLAYLLPAIVHIQHQ----PFLEHGD 167
Query: 220 GPYGLIICPSRELARQTHDIIQYYCAALPIGS 251
GP L++ P+RELA+Q + Y A + S
Sbjct: 168 GPICLVLAPTRELAQQVQQVAAEYGRASRLKS 199
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
+D++GIA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 KDMVGIAQTGSGKTLAYLLPAIVHIQHQ----PFLEHGDGPICLVLAPTRELAQQVQQVA 188
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A L++ GG P + +++G++
Sbjct: 189 AEYGRA--SRLKSTCIYGGAPKGPQIRDLERGVE 220
>gi|351697633|gb|EHB00552.1| Putative ATP-dependent RNA helicase DDX23 [Heterocephalus glaber]
Length = 819
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 424 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 479
Query: 233 ARQTHD 238
A+Q +
Sbjct: 480 AQQIEE 485
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 427 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 482
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 483 IEEETIKF---GKPLGIRTVAVIGGI 505
>gi|195388290|ref|XP_002052813.1| GJ17767 [Drosophila virilis]
gi|194149270|gb|EDW64968.1| GJ17767 [Drosophila virilis]
Length = 835
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G +P S+ P ++ ++ G K+PTPIQ Q IP L RDI
Sbjct: 388 IFREDYNITIKGGKIPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGLQNRDI 447
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP--GEGPYGLIICPSRELARQTHD 238
IG+A TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q +
Sbjct: 448 IGVAETGSGKTLAFLIPLLSW-IQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 502
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP--GEGPYGLIICPSRELARQT-H 63
+RDIIG+A TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q
Sbjct: 444 NRDIIGVAETGSGKTLAFLIPLLSW-IQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 502
Query: 64 DIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT + +GG+
Sbjct: 503 ETIKF---GQPLGIRTVVVVGGL 522
>gi|147774689|emb|CAN74342.1| hypothetical protein VITISV_005473 [Vitis vinifera]
Length = 661
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + + +G +P S+ KL L++A+E G K P+PIQ+ IP L RD+
Sbjct: 240 IFREDFNVSYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDV 299
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q D
Sbjct: 300 IGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEDET 355
Query: 241 QYYCAALPI 249
+ L I
Sbjct: 356 VKFAHYLGI 364
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 295 QQRDVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQ 350
Query: 62 THDIIQYYCAALPIPLRTCLAIG 84
D + L I + + + I
Sbjct: 351 IEDETVKFAHYLGIKVVSIVVIA 373
>gi|116191655|ref|XP_001221640.1| hypothetical protein CHGG_05545 [Chaetomium globosum CBS 148.51]
gi|118575171|sp|Q2H720.1|DBP2_CHAGB RecName: Full=ATP-dependent RNA helicase DBP2
gi|88181458|gb|EAQ88926.1| hypothetical protein CHGG_05545 [Chaetomium globosum CBS 148.51]
Length = 562
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ + V G++VP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 116 DKFRRDHAMTVAGNNVPSPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 175
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 176 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEITK 231
Query: 243 YCAALPI 249
+ + I
Sbjct: 232 FGKSSRI 238
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 174 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEI 229
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + +G++
Sbjct: 230 TKFGKSSRI--RNTCVYGGVPKGPQTRDLSRGVE 261
>gi|332020300|gb|EGI60731.1| Putative ATP-dependent RNA helicase DDX5 [Acromyrmex echinatior]
Length = 462
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R N I V+GD++P F P ++ + +G +PTPIQ QG P ALSGRD++
Sbjct: 131 FRENAEITVKGDNIPNPIQYFEEGNFPPYVMEGIRREGYSQPTPIQAQGWPIALSGRDLV 190
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYY 243
IA TGSGKTL ++LP ++ + Q G+GP LI+ P+RELA+Q ++ +
Sbjct: 191 AIAQTGSGKTLGYILPAIVHIIHQPR---INTGDGPIVLILAPTRELAQQIQEVANSF 245
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD++ IA TGSGKTL ++LP ++ + Q G+GP LI+ P+RELA+Q ++
Sbjct: 185 SGRDLVAIAQTGSGKTLGYILPAIVHIIHQPR---INTGDGPIVLILAPTRELAQQIQEV 241
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + TC+ GG P +++GI+
Sbjct: 242 ANSFGETAAV-RNTCI-FGGAPKGPQAHDLERGIE 274
>gi|119481045|ref|XP_001260551.1| RNA helicase (Dbp), putative [Neosartorya fischeri NRRL 181]
gi|134034066|sp|A1DGZ7.1|DBP2_NEOFI RecName: Full=ATP-dependent RNA helicase dbp2
gi|119408705|gb|EAW18654.1| RNA helicase (Dbp), putative [Neosartorya fischeri NRRL 181]
Length = 545
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + V+G +VP +F P+ ++ ++A+G ++PT IQ QG P ALSGRD++
Sbjct: 101 FRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVV 160
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I +
Sbjct: 161 GIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQTEISKFG 216
Query: 245 AALPI 249
+ I
Sbjct: 217 KSSRI 221
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 155 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQT 210
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 211 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 244
>gi|432114505|gb|ELK36353.1| Putative ATP-dependent RNA helicase DDX23 [Myotis davidii]
Length = 820
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 365 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 424
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 425 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 480
Query: 233 ARQTHD 238
A+Q +
Sbjct: 481 AQQIEE 486
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 483
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IG +
Sbjct: 484 IEEETIKF---GKPLGIRTVAVIGSI 506
>gi|395528498|ref|XP_003766366.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Sarcophilus
harrisii]
Length = 818
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 363 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 422
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 423 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 478
Query: 233 ARQTHD 238
A+Q +
Sbjct: 479 AQQIEE 484
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 426 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 481
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 482 IEEETIKF---GKPLGIRTVAVIGGI 504
>gi|322700629|gb|EFY92383.1| ATP-dependent RNA helicase dbp-2 [Metarhizium acridum CQMa 102]
Length = 552
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR ++ + G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 116 DAFRRKHQMTIAGRDVPKPVETFDEAGFPRYVLDEVKAQGFPAPTAIQSQGWPMALSGRD 175
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 176 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEITK 231
Query: 243 Y 243
+
Sbjct: 232 F 232
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 174 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEI 229
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 230 TKFGRSSRI--RNTCVYGGVPKGPQIRDLSRGVE 261
>gi|224135589|ref|XP_002322111.1| predicted protein [Populus trichocarpa]
gi|222869107|gb|EEF06238.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 105 IKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGI 164
+ W + + + + ++ I R + I +G +P S+ KL L++A+E
Sbjct: 252 VDRHW-SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWAESKLSSELLKAVERVVY 310
Query: 165 KKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEG 220
KKP+PIQ+ IP L RD+IGIA TGSGKT FVLP+L + ++LP + EG
Sbjct: 311 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTCAFVLPMLTYI----SRLPPMSEENEAEG 366
Query: 221 PYGLIICPSRELARQTHDIIQYYCAALPI 249
PY +++ P+RELA+Q D + L I
Sbjct: 367 PYAVVMAPTRELAQQIEDETVKFAHYLGI 395
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 10/95 (10%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 328 RDVIGIAETGSGKTCAFVLPMLTYI----SRLPPMSEENEAEGPYAVVMAPTRELAQQIE 383
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 384 DETVKFAHYLGIKVVSI--VGGQSIEEQGFRIRQG 416
>gi|197246501|gb|AAI69082.1| Ddx23 protein [Rattus norvegicus]
Length = 798
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 343 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 402
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 403 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 458
Query: 233 ARQTHD 238
A+Q +
Sbjct: 459 AQQIEE 464
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 406 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 461
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 462 IEEETIKF---GKPLGIRTVAVIGGI 484
>gi|126344320|ref|XP_001381629.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Monodelphis
domestica]
Length = 818
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 363 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 422
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 423 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 478
Query: 233 ARQTHD 238
A+Q +
Sbjct: 479 AQQIEE 484
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 426 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 481
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 482 IEEETIKF---GKPLGIRTVAVIGGI 504
>gi|355568839|gb|EHH25120.1| hypothetical protein EGK_08882 [Macaca mulatta]
Length = 614
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|350408906|ref|XP_003488552.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Bombus
impatiens]
Length = 1030
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G P S+ + + + L+ G +KPTPIQ Q IPA +SGRD+IGIA TG
Sbjct: 356 IRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTG 415
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
SGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 416 SGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQ 456
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 404 SGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQIGRD 460
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L + C+ GG +++ + +K+G +
Sbjct: 461 SKKFTKSLGLS-HVCV-YGGTGISEQIAELKRGAE 493
>gi|344291256|ref|XP_003417352.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Loxodonta
africana]
Length = 616
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|340724160|ref|XP_003400452.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46-like [Bombus terrestris]
Length = 1030
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G P S+ + + + L+ G +KPTPIQ Q IPA +SGRD+IGIA TG
Sbjct: 356 IRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTG 415
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
SGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 416 SGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQ 456
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKTL F+LP+ L+Q P G+GP LI+ P+REL Q
Sbjct: 404 SGRDLIGIAKTGSGKTLAFLLPMFRHILDQP---PLADGDGPIALIMTPTRELCMQIGRD 460
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + +L + C+ GG +++ + +K+G +
Sbjct: 461 SKKFTKSLGLS-HVCV-YGGTGISEQIAELKRGAE 493
>gi|30584123|gb|AAP36310.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA
helicase, 68kDa) [synthetic construct]
gi|60653929|gb|AAX29657.1| DEAD box polypeptide 5 [synthetic construct]
Length = 615
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|225443496|ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 709
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + + +G +P S+ KL L++A+E G K P+PIQ+ IP L RD+
Sbjct: 270 IFREDFNVSYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDV 329
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q D
Sbjct: 330 IGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEDET 385
Query: 241 QYYCAALPI 249
+ L I
Sbjct: 386 VKFAHYLGI 394
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 325 QQRDVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQ 380
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 381 IEDETVKFAHYLGIKVVSI--VGGQSIEEQGFRIRQG 415
>gi|343958674|dbj|BAK63192.1| probable ATP-dependent RNA helicase DDX5 [Pan troglodytes]
Length = 614
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|197692465|dbj|BAG70196.1| ATP-dependent RNA helicase DDX5 [Homo sapiens]
Length = 614
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|221307593|ref|NP_001138306.1| probable ATP-dependent RNA helicase DDX5 [Pan troglodytes]
gi|156630859|sp|A5A6J2.1|DDX5_PANTR RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|146741418|dbj|BAF62365.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Pan troglodytes verus]
Length = 614
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|75076425|sp|Q4R6M5.1|DDX5_MACFA RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|67969804|dbj|BAE01250.1| unnamed protein product [Macaca fascicularis]
Length = 614
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|440912672|gb|ELR62224.1| Putative ATP-dependent RNA helicase DDX5, partial [Bos grunniens
mutus]
Length = 671
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 131 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 190
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 191 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 246
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 247 YCRACRLKS 255
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 190 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 245
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A L++ GG P + +++G++
Sbjct: 246 EYCRA--CRLKSTCIYGGAPKGPQIRDLERGVE 276
>gi|197099326|ref|NP_001126958.1| probable ATP-dependent RNA helicase DDX5 [Pongo abelii]
gi|75061603|sp|Q5R4I9.1|DDX5_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|55733290|emb|CAH93327.1| hypothetical protein [Pongo abelii]
Length = 614
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|194387478|dbj|BAG60103.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 63 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 122
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 123 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 178
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 179 YCRACRLKS 187
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 122 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 177
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 178 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 208
>gi|351710344|gb|EHB13263.1| Putative ATP-dependent RNA helicase DDX5 [Heterocephalus glaber]
Length = 615
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|348511217|ref|XP_003443141.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Oreochromis niloticus]
Length = 628
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR+ I V+G D P F P ++ + + +PTPIQ QG P ALSG D++G
Sbjct: 82 RRSKTITVKGRDCPNPIMKFHEASFPSYVMDVINKQNWTEPTPIQAQGWPLALSGMDMVG 141
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q + Y
Sbjct: 142 IAQTGSGKTLAYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAEYGR 197
Query: 246 ALPIGS 251
A + S
Sbjct: 198 ASRLKS 203
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++GIA TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 138 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 193
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y A + TC+ GG P + +++G++
Sbjct: 194 EYGRASRLK-STCI-YGGAPKGPQIRDLERGVE 224
>gi|281365720|ref|NP_729194.2| CG10077, isoform C [Drosophila melanogaster]
gi|272455065|gb|AAN12065.2| CG10077, isoform C [Drosophila melanogaster]
Length = 472
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I ++GD VP F P+ ++ + +G KPT IQ QG P A+SGRD++G+A TG
Sbjct: 145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTG 204
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
SGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 205 SGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQV 249
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++G+A TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 195 RDLVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQVA 250
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + TC+ GG P Q +++G++
Sbjct: 251 IEFGSNTHV-RNTCI-FGGAPKGQQARDLERGVE 282
>gi|74354729|gb|AAI03319.1| DDX5 protein [Bos taurus]
Length = 671
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 131 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 190
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 191 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 246
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 247 YCRACRLKS 255
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 190 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 245
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A L++ GG P + +++G++
Sbjct: 246 EYCRA--CRLKSTCIYGGAPKGPQIRDLERGVE 276
>gi|385301886|gb|EIF46046.1| pre-mrna-splicing atp-dependent rna helicase prp28 [Dekkera
bruxellensis AWRI1499]
Length = 323
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 82/140 (58%), Gaps = 7/140 (5%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPT 168
W P + + ++ I+R + I ++G ++P +++ L +++ + A K+PT
Sbjct: 166 WEKP--LEKMTNRDWRIMREDFDIKLKGPNIPNPLRTWKESXLSNTIJSRINALRYKEPT 223
Query: 169 PIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIIC 227
PIQ IPA + R+ IGIA TGSGKTL ++LPIL + TK+P L P EGPY L++
Sbjct: 224 PIQRATIPAGVKFRNAIGIAETGSGKTLAYJLPILNYL----TKVPPLGPYEGPYALVLV 279
Query: 228 PSRELARQTHDIIQYYCAAL 247
P+RELA Q + Q + ++
Sbjct: 280 PARELANQVDEEFQKFYGSI 299
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
R+ IGIA TGSGKTL ++LPIL + TK+P L P EGPY L++ P+RELA Q +
Sbjct: 237 RNAIGIAETGSGKTLAYJLPILNYL----TKVPPLGPYEGPYALVLVPARELANQVDEEF 292
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKK 97
Q + + I IGG ++ D K
Sbjct: 293 QKFYGS--IRFTAASLIGGHRYEENTDAFXK 321
>gi|348560357|ref|XP_003465980.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Cavia
porcellus]
Length = 614
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|322711331|gb|EFZ02905.1| ATP-dependent RNA helicase dbp-2 [Metarhizium anisopliae ARSEF 23]
Length = 545
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR ++ + G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 116 DAFRRKHQMTIAGRDVPKPVETFDEAGFPRYVLDEVKAQGFPAPTAIQSQGWPMALSGRD 175
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 176 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEITK 231
Query: 243 Y 243
+
Sbjct: 232 F 232
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 174 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQIQQEI 229
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 230 TKFGRSSRI--RNTCVYGGVPKGPQIRDLSRGVE 261
>gi|296201830|ref|XP_002748194.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Callithrix jacchus]
Length = 614
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|357625037|gb|EHJ75591.1| hypothetical protein KGM_15102 [Danaus plexippus]
Length = 452
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 3/123 (2%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R +I V+G DVP F P+ ++ + +G PTPIQ QG P ALSGRD++G
Sbjct: 11 RSQHQITVKGRDVPAPSMFFDEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDMVG 70
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAA 246
IA TGSGKTL ++LP ++ + Q L EGP L++ P+RELA+Q + + +
Sbjct: 71 IAQTGSGKTLAYILPAIVHIINQPR---LLRDEGPIVLVLAPTRELAQQIQTVANEFGQS 127
Query: 247 LPI 249
+ +
Sbjct: 128 VQV 130
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKTL ++LP ++ + Q L EGP L++ P+RELA+Q +
Sbjct: 66 RDMVGIAQTGSGKTLAYILPAIVHIINQPR---LLRDEGPIVLVLAPTRELAQQIQTVAN 122
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ ++ + TC+ GG P +++G++
Sbjct: 123 EFGQSVQVR-NTCI-FGGAPKGPQGRTLERGVE 153
>gi|449542335|gb|EMD33314.1| hypothetical protein CERSUDRAFT_117934 [Ceriporiopsis subvermispora
B]
Length = 514
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 9/140 (6%)
Query: 113 RCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
+ + + D+ + R+ + V+G ++P SF + PE ++ + A+G PTPIQ
Sbjct: 65 KRVSARSDREIEEFRKAKEMKVQGRNIPRPVTSFDEIGFPEYIMSTIRAQGFPAPTPIQC 124
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRE 231
Q P AL+GRD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RE
Sbjct: 125 QAWPMALTGRDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRE 180
Query: 232 LARQTHDIIQYYCAALPIGS 251
LA Q IQ C S
Sbjct: 181 LAVQ----IQQECTKFGSNS 196
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 134 RDVVAIAQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIALILAPTRELAVQ----I 185
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C +R GG P + +++G++
Sbjct: 186 QQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVE 221
>gi|440492144|gb|ELQ74738.1| ATP-dependent RNA helicase [Trachipleistophora hominis]
Length = 482
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 99 IQYNDPI---KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESL 155
++ N P+ K +R + + ++ R ++ + G+ VP F + E +
Sbjct: 27 VRDNGPVDFEKNFYRESARVSEMSEKEVSEFRAKNQMKIIGEGVPKPIIDFEDINFGEGV 86
Query: 156 VRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPF 215
+ K K P IQ QG P ALSGRD++GIA TGSGKT+ F LP L+ Q +P
Sbjct: 87 LNYFRKKDFKSPMAIQAQGWPMALSGRDMVGIAQTGSGKTISFALPALVHAAAQ---VPL 143
Query: 216 LPGEGPYGLIICPSRELARQTHDIIQYY 243
P +GP LI+ P+REL Q ++++ Y
Sbjct: 144 RPNDGPIALILAPTRELCMQIQEVVEEY 171
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++GIA TGSGKT+ F LP L+ Q +P P +GP LI+ P+REL Q ++++
Sbjct: 113 RDMVGIAQTGSGKTISFALPALVHAAAQ---VPLRPNDGPIALILAPTRELCMQIQEVVE 169
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Y +R+ GGV I++G++
Sbjct: 170 EYDRFF--NMRSLAVYGGVSAFPQRQAIRRGVE 200
>gi|348580205|ref|XP_003475869.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Cavia
porcellus]
Length = 819
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P S++ LP ++ ++ G K+PTPIQ Q IP
Sbjct: 364 MTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPI 423
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 424 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTREL 479
Query: 233 ARQTHD 238
A+Q +
Sbjct: 480 AQQIEE 485
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 427 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ 482
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 483 IEEETIKF---GKPLGIRTVAVIGGI 505
>gi|340717724|ref|XP_003397328.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
terrestris]
Length = 713
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G++ P +F P+ ++ + +G +PT IQ QG P ALSGRD++GIA TG
Sbjct: 95 ITVKGNNTPSPIQAFEESNFPDYVMEEIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTG 154
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCAA 246
SGKTL ++LP + Q P L GEGP LI+ P+RELA+Q + + + ++
Sbjct: 155 SGKTLAYILPATVHINNQ----PRLNRGEGPIVLILAPTRELAQQIQSVARDFGSS 206
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL ++LP + Q P L GEGP LI+ P+RELA+Q +
Sbjct: 145 RDLVGIAQTGSGKTLAYILPATVHINNQ----PRLNRGEGPIVLILAPTRELAQQIQSVA 200
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + ++ I TC+ GG P +++G++
Sbjct: 201 RDFGSSSCI-RNTCI-FGGSPKGPQARDLERGVE 232
>gi|327278500|ref|XP_003224000.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Anolis
carolinensis]
Length = 1030
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G P ++ + ++ +L+ G +KPTPIQ Q IPA ++GRD+IGIA TG
Sbjct: 358 ITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMNGRDLIGIAKTG 417
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
SGKT+ F+LP+ ++Q P GEGP +I+ P+RELA Q
Sbjct: 418 SGKTIAFLLPMFRHIMDQR---PLEEGEGPIAVIMTPTRELALQ 458
Score = 66.6 bits (161), Expect = 8e-09, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
N RD+IGIA TGSGKT+ F+LP+ ++Q P GEGP +I+ P+RELA Q
Sbjct: 406 NGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEEGEGPIAVIMTPTRELALQITKE 462
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQY---------------NDPIKTSWR 110
+ + L + R GG +++ + +K+G + N + R
Sbjct: 463 CKKFSKTLGV--RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRR 520
Query: 111 APRCILSLPDQVHDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA---KGIK 165
+L D++ D+ + +RI+ D+V P + + + RA+EA + +
Sbjct: 521 VTYVVLDEADRMFDMGFEPQVMRIV---DNVRP---DRQTVMFSATFPRAMEALARRILN 574
Query: 166 KPTPIQVQG 174
KP +QV G
Sbjct: 575 KPIEVQVGG 583
>gi|4758138|ref|NP_004387.1| probable ATP-dependent RNA helicase DDX5 [Homo sapiens]
gi|300793700|ref|NP_001178324.1| probable ATP-dependent RNA helicase DDX5 [Bos taurus]
gi|384475891|ref|NP_001245091.1| probable ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|73965213|ref|XP_850467.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2
[Canis lupus familiaris]
gi|301778273|ref|XP_002924553.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Ailuropoda melanoleuca]
gi|332227004|ref|XP_003262677.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Nomascus leucogenys]
gi|397480284|ref|XP_003811416.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1 [Pan
paniscus]
gi|402900780|ref|XP_003913345.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Papio anubis]
gi|403303806|ref|XP_003942513.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Saimiri boliviensis boliviensis]
gi|410981520|ref|XP_003997116.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Felis catus]
gi|426238277|ref|XP_004013081.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Ovis aries]
gi|426347221|ref|XP_004041256.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Gorilla gorilla gorilla]
gi|129383|sp|P17844.1|DDX5_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5; AltName: Full=RNA helicase p68
gi|35220|emb|CAA36324.1| unnamed protein product [Homo sapiens]
gi|38318|emb|CAA33751.1| unnamed protein product [Homo sapiens]
gi|2599360|gb|AAB84094.1| RNA helicase p68 [Homo sapiens]
gi|16359122|gb|AAH16027.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
gi|30582725|gb|AAP35589.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) [Homo sapiens]
gi|61362303|gb|AAX42197.1| DEAD box polypeptide 5 [synthetic construct]
gi|61362310|gb|AAX42198.1| DEAD box polypeptide 5 [synthetic construct]
gi|119614608|gb|EAW94202.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, isoform CRA_a [Homo
sapiens]
gi|119614609|gb|EAW94203.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, isoform CRA_a [Homo
sapiens]
gi|123979568|gb|ABM81613.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [synthetic construct]
gi|123994197|gb|ABM84700.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [synthetic construct]
gi|168277560|dbj|BAG10758.1| ATP-dependent RNA helicase DDX5 [synthetic construct]
gi|197692215|dbj|BAG70071.1| ATP-dependent RNA helicase DDX5 [Homo sapiens]
gi|296476161|tpg|DAA18276.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 2 [Bos
taurus]
gi|380810156|gb|AFE76953.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|383416203|gb|AFH31315.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|384945576|gb|AFI36393.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|410264808|gb|JAA20370.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Pan troglodytes]
Length = 614
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|395817878|ref|XP_003804109.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Otolemur garnettii]
Length = 941
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G P S+ + ++ +L+ G +KPTPIQ Q IPA +SGRD+IGIA TG
Sbjct: 322 ITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTG 381
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
SGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 382 SGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQ 422
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 370 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 426
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR GG +++ + +K+G +
Sbjct: 427 CKKFSKTL--GLRVVCVYGGTGISEQIAELKRGAE 459
>gi|395736192|ref|XP_003780666.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Pongo abelii]
Length = 1014
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G P S+ + ++ +L+ G +KPTPIQ Q IPA +SGRD+IGIA TG
Sbjct: 340 ITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTG 399
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
SGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 400 SGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQ 440
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 29/187 (15%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q + GEGP +I+ P+RELA Q
Sbjct: 388 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTRELALQITKE 444
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLD---VIKKGIQ----------YNDPIKTSWRAP 112
+ + L LR GG +++ I+ G + Y+ + R
Sbjct: 445 CKKFSKTL--GLRVVCVYGGTGISEQKGPSRFIELGFRDLNHQRFFRPYDGRVTNLRRVT 502
Query: 113 RCILSLPDQVHDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEA---KGIKKP 167
+L D++ D+ + +RI+ D+V P + + + RA+EA + + KP
Sbjct: 503 YVVLDEADRMFDMGFEPQVMRIV---DNVRP---DRQTVMFSATFPRAMEALARRILSKP 556
Query: 168 TPIQVQG 174
+QV G
Sbjct: 557 IEVQVGG 563
>gi|328784461|ref|XP_623668.3| PREDICTED: ATP-dependent RNA helicase p62-like isoform 1 [Apis
mellifera]
Length = 527
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D+ R+ +I ++G+ +P F P+ +++ + +G +PT IQ QG P A+SG +
Sbjct: 95 DMFRQENQITLKGEKIPNPIQHFEEGNFPDHVMQCIRKQGFSEPTAIQAQGWPIAMSGHN 154
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
++GIA TGSGKTL ++LP ++ Q+ P G+GP LI+ P+RELA+Q +
Sbjct: 155 MVGIAQTGSGKTLGYILPAIVHISSQQ---PLNHGDGPIALILAPTRELAQQIQKV 207
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
+++GIA TGSGKTL ++LP ++ Q+ P G+GP LI+ P+RELA+Q IQ
Sbjct: 153 HNMVGIAQTGSGKTLGYILPAIVHISSQQ---PLNHGDGPIALILAPTRELAQQ----IQ 205
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ TC+ GG P +++G++
Sbjct: 206 KVTCSFGYVRSTCI-FGGAPKGSQARDLEQGVE 237
>gi|321252102|ref|XP_003192288.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|317458756|gb|ADV20501.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
Length = 1063
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
I Y K + P +L + ++ +++R + I + G D P ++ LP+ +
Sbjct: 348 IDYEPFRKAFYVPPVEVLEMDEEEAELMRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLD 407
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ +G + PT IQ Q IPA +SGRD+IGIA TGSGKT+ F+LP+L +Q P
Sbjct: 408 VIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQR---PVSG 464
Query: 218 GEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
EGP +++ P+RELA Q + Q + L I
Sbjct: 465 SEGPIAVVLSPTRELATQIYKECQPFLKVLNI 496
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+L +Q P EGP +++ P+RELA Q +
Sbjct: 430 SGRDVIGIAKTGSGKTVAFLLPMLRHVRDQR---PVSGSEGPIAVVLSPTRELATQIYKE 486
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q + L I C +GG +++ + +KKG +
Sbjct: 487 CQPFLKVLNIRASCC--VGGSSISEDIAAMKKGAE 519
>gi|221057183|ref|XP_002259729.1| ATP-dependent RNA helicase [Plasmodium knowlesi strain H]
gi|193809801|emb|CAQ40505.1| ATP-dependent RNA helicase, putative [Plasmodium knowlesi strain H]
Length = 1354
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 115 ILSLPDQVHDIIRRNL-RILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQ 173
I ++ D D+ R+N I+V G + P F LP ++ LE K KK IQ+Q
Sbjct: 590 ITNMKDSDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILEKKNFKKMFGIQMQ 649
Query: 174 GIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELA 233
IPA + GRD+I IA TGSGKTL ++ P++ L Q P +GP +I+ P+REL+
Sbjct: 650 TIPALMCGRDVIAIAETGSGKTLSYLFPLIRHVLHQA---PLRNNDGPIAIILTPTRELS 706
Query: 234 RQTHDIIQYYCAAL 247
+Q + YC A+
Sbjct: 707 KQVKSEARPYCQAV 720
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+I IA TGSGKTL ++ P++ L Q P +GP +I+ P+REL++Q +
Sbjct: 658 RDVIAIAETGSGKTLSYLFPLIRHVLHQA---PLRNNDGPIAIILTPTRELSKQVKSEAR 714
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + LR GG + L+ +K+G++
Sbjct: 715 PYCQA--VNLRILAVYGGSNIGTQLNTLKRGVE 745
>gi|353242513|emb|CCA74151.1| probable RNA helicase dbp2 (DEAD box protein) [Piriformospora
indica DSM 11827]
Length = 550
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K + + + + D + RR I V+G VP F + P L+ +E +G
Sbjct: 85 KNFYAEDKRVSARSDSEIEAFRRAKEIKVQGRGVPRPVTRFDEVGFPNYLMSTIEQQGFA 144
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
+PTPIQ Q P ALSGRD++ I+ TGSGKT+ F LP ++ Q P L PG+GP L
Sbjct: 145 EPTPIQCQAWPMALSGRDVVAISQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIVL 200
Query: 225 IICPSRELARQTHDIIQYYCAALPIGS 251
I+ P+RELA Q IQ C S
Sbjct: 201 ILAPTRELAVQ----IQTECTKFGANS 223
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ I+ TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 159 SGRDVVAISQTGSGKTISFALPAMLHINAQ----PLLAPGDGPIVLILAPTRELAVQ--- 211
Query: 65 IIQYYCAALPIP--LRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C +R GG P + +++G++
Sbjct: 212 -IQTECTKFGANSRIRNTAIYGGAPKGPQIRDLQRGVE 248
>gi|350418218|ref|XP_003491789.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
impatiens]
Length = 712
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 5/116 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G++ P +F P+ ++ + +G +PT IQ QG P ALSGRD++GIA TG
Sbjct: 93 ITVKGNNTPSPIQAFEESNFPDYVMEEIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTG 152
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCAA 246
SGKTL ++LP + Q P L GEGP LI+ P+RELA+Q + + + ++
Sbjct: 153 SGKTLAYILPATVHINNQ----PRLNRGEGPIVLILAPTRELAQQIQSVARDFGSS 204
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL ++LP + Q P L GEGP LI+ P+RELA+Q +
Sbjct: 143 RDLVGIAQTGSGKTLAYILPATVHINNQ----PRLNRGEGPIVLILAPTRELAQQIQSVA 198
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + ++ I TC+ GG P +++G++
Sbjct: 199 RDFGSSSCI-RNTCI-FGGSPKGPQARDLERGVE 230
>gi|194216755|ref|XP_001495197.2| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Equus
caballus]
Length = 614
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|302692692|ref|XP_003036025.1| hypothetical protein SCHCODRAFT_256129 [Schizophyllum commune H4-8]
gi|300109721|gb|EFJ01123.1| hypothetical protein SCHCODRAFT_256129 [Schizophyllum commune H4-8]
Length = 760
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G +P S++ +P S++ +E G K+P+PIQ Q IP L RDI
Sbjct: 296 IFREDFSIAARGGQIPHPLRSWQESDIPSSILDVIETIGYKEPSPIQRQAIPIGLQNRDI 355
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQ 235
IGIA TGSGKT FV+P+L F + + L E GP+ LI+ P+RELA+Q
Sbjct: 356 IGIAETGSGKTAAFVIPLLAFI----SAVAPLTDENRHLGPFALILAPTRELAQQ 406
Score = 60.1 bits (144), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 25/134 (18%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQT 62
+RDIIGIA TGSGKT FV+P+L F + + L E GP+ LI+ P+RELA+Q
Sbjct: 352 NRDIIGIAETGSGKTAAFVIPLLAFI----SAVAPLTDENRHLGPFALILAPTRELAQQI 407
Query: 63 HDIIQYYCAALPIPLRTCLAI-GGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
+ + + L TC++I GG + + +++G + I++ P +
Sbjct: 408 EVETRKFASGLGY---TCVSIVGGRSVEEQQFNLREGAE-------------IIIATPGR 451
Query: 122 VHDIIRRNLRILVE 135
+ D++ R++ +L +
Sbjct: 452 LKDVLERHVLVLSQ 465
>gi|91206537|sp|Q4X195.2|DBP2_ASPFU RecName: Full=ATP-dependent RNA helicase dbp2
Length = 547
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + V+G +VP +F P+ ++ ++A+G ++PT IQ QG P ALSGRD++
Sbjct: 103 FRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVV 162
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 163 GIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQ 209
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 157 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQA 212
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 213 EISKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 246
>gi|414866472|tpg|DAA45029.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 766
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 5/140 (3%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRA 158
I+Y+ K + I + DQ ++L I V G DVP +F L+ A
Sbjct: 174 IEYDAFTKDFYEEKPSISGMSDQEVTDYMKSLSIRVSGFDVPRPIKNFEDCGFHVPLMNA 233
Query: 159 LEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG 218
+ + +KPT IQ Q +P LSGRDIIGIA TGSGKT FVLP+++ ++Q P L
Sbjct: 234 IAKQAYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEK 289
Query: 219 -EGPYGLIICPSRELARQTH 237
EGP G+I P+RELA Q +
Sbjct: 290 EEGPIGVICAPTRELAHQIY 309
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 255 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVICAPTRELAHQIY- 309
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
++ A P LR GGV +K G +
Sbjct: 310 -LEAKKFAKPYNLRVAAIYGGVSKFDQFKELKAGCE 344
>gi|71001454|ref|XP_755408.1| RNA helicase (Dbp) [Aspergillus fumigatus Af293]
gi|66853046|gb|EAL93370.1| RNA helicase (Dbp), putative [Aspergillus fumigatus Af293]
gi|159129480|gb|EDP54594.1| RNA helicase (Dbp), putative [Aspergillus fumigatus A1163]
Length = 565
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + V+G +VP +F P+ ++ ++A+G ++PT IQ QG P ALSGRD++
Sbjct: 103 FRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVV 162
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQ 235
GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 163 GIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQ 209
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 159 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQAEI 214
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 215 SKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 246
>gi|71019395|ref|XP_759928.1| hypothetical protein UM03781.1 [Ustilago maydis 521]
gi|46099583|gb|EAK84816.1| hypothetical protein UM03781.1 [Ustilago maydis 521]
Length = 568
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPT 168
W + + + + D+ I R + I G ++P S+R +P S++ +E G K+P+
Sbjct: 233 W-SEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRESGIPASILSTIEEVGYKEPS 291
Query: 169 PIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGL 224
PIQ Q IP L RD+IGIA TGSGKT F++P+L + +KLP L GP L
Sbjct: 292 PIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYI----SKLPKLDEHTKALGPQAL 347
Query: 225 IICPSRELARQTHDIIQYYCAAL 247
I+ P+RELA+Q + L
Sbjct: 348 ILVPTRELAQQIETETNKFAGRL 370
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 31/155 (20%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQ 61
+RD+IGIA TGSGKT F++P+L + +KLP L GP LI+ P+RELA+Q
Sbjct: 303 QNRDLIGIAETGSGKTASFLIPLLAYI----SKLPKLDEHTKALGPQALILVPTRELAQQ 358
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
+ L LR +GG MN ++ G + +++ P +
Sbjct: 359 IETETNKFAGRL--GLRCVSIVGGRDMNDQAYALRDGAE-------------IVIATPGR 403
Query: 122 VHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLV 156
+ D I R++ +L + C++ +M + +V
Sbjct: 404 LKDCIERHVLVLSQ--------CTYVVMDEADKMV 430
>gi|320590111|gb|EFX02556.1| dead deah box RNA helicase [Grosmannia clavigera kw1407]
Length = 1178
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 104 PI-KTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEA 161
PI K W P + L + +R +L I V G DVP + L ++ +E
Sbjct: 496 PIRKNFWVEPHELSELTEAEVAELRLDLDGIKVSGKDVPKPVQKWSHCGLTRPMLEVIEQ 555
Query: 162 KGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGP 221
G KPT IQ+Q +P +SGRD+IG+A TGSGKT+ F++P+ ++QE + +GP
Sbjct: 556 LGYDKPTAIQMQALPVIMSGRDVIGVAKTGSGKTMAFLVPMFRHIMDQER----VRDDGP 611
Query: 222 YGLIICPSRELARQTH 237
GLI+ P+RELA Q H
Sbjct: 612 IGLILTPTRELAVQIH 627
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F++P+ ++QE + +GP GLI+ P+RELA Q H
Sbjct: 574 SGRDVIGVAKTGSGKTMAFLVPMFRHIMDQER----VRDDGPIGLILTPTRELAVQIHRD 629
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + A + LR A GG P+ + +K+G +
Sbjct: 630 CKPF--AKKLGLRAVCAYGGPPIKDQIAELKRGAE 662
>gi|169853351|ref|XP_001833356.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
gi|116505566|gb|EAU88461.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
Length = 748
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I G ++P S+ +P+ ++ +E G K+P+PIQ Q IP L RD+
Sbjct: 302 IFREDFSISARGGNIPHPLRSWEESDIPQVILDCIERIGYKEPSPIQRQAIPIGLQNRDV 361
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQTHDII 240
IGIA TGSGKT FV+P+L F L LP + GPY LI+ P+RELA+Q
Sbjct: 362 IGIAETGSGKTAAFVIPMLAFIL----TLPIFTDDNRHLGPYALILAPTRELAQQIESET 417
Query: 241 QYYCAALPIG 250
+ + A P+G
Sbjct: 418 KKF--ATPLG 425
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 23/134 (17%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQ 61
+RD+IGIA TGSGKT FV+P+L F L LP + GPY LI+ P+RELA+Q
Sbjct: 357 QNRDVIGIAETGSGKTAAFVIPMLAFIL----TLPIFTDDNRHLGPYALILAPTRELAQQ 412
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
+ + A P+ + +GG + + +++G + I++ P +
Sbjct: 413 IESETKKF--ATPLGYKCVSIVGGRAVEEQQFNLREGAE-------------IIIATPGR 457
Query: 122 VHDIIRRNLRILVE 135
+ D++ R++ +L +
Sbjct: 458 LKDVLERHVLVLSQ 471
>gi|260948952|ref|XP_002618773.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238848645|gb|EEQ38109.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + VEG D+P SF P+ ++ ++ +G KPT IQ QG P A SGRD++
Sbjct: 86 FRKEHDMTVEGQDIPKPITSFEEAGFPDYVLSEVKQQGFPKPTAIQCQGWPMASSGRDMV 145
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q IQ C
Sbjct: 146 GIASTGSGKTLSYCLPAIVHINAQ----PLLKPGDGPIVLILAPTRELAVQ----IQTEC 197
Query: 245 AALPIGS 251
+ S
Sbjct: 198 SKFGSSS 204
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 13/99 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 140 SGRDMVGIASTGSGKTLSYCLPAIVHINAQ----PLLKPGDGPIVLILAPTRELAVQ--- 192
Query: 65 IIQYYCAALPIPLR---TCLAIGGVPMNQSLDVIKKGIQ 100
IQ C+ R TC+ GG P Q + + +G++
Sbjct: 193 -IQTECSKFGSSSRIRNTCI-YGGAPKGQQVRDLARGVE 229
>gi|90075448|dbj|BAE87404.1| unnamed protein product [Macaca fascicularis]
Length = 566
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|448509275|ref|XP_003866103.1| Dbp2 protein [Candida orthopsilosis Co 90-125]
gi|380350441|emb|CCG20663.1| Dbp2 protein [Candida orthopsilosis Co 90-125]
Length = 562
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R + V+G D+P +F P+ ++ L+A+G KPT IQ QG P ALSGRD
Sbjct: 105 EAFRNKNEMSVQGHDIPHPITTFDEAGFPDYVLNELKAQGFPKPTAIQCQGWPMALSGRD 164
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q IQ
Sbjct: 165 MVGIAATGSGKTLSYCLPGIVHINAQ----PLLKPGDGPIVLVLAPTRELACQ----IQT 216
Query: 243 YCAALPIGS 251
C+ S
Sbjct: 217 ECSKFGSSS 225
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 161 SGRDMVGIAATGSGKTLSYCLPGIVHINAQ----PLLKPGDGPIVLVLAPTRELACQ--- 213
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C+ +R GG P + + KG++
Sbjct: 214 -IQTECSKFGSSSRIRNTCVYGGAPKGPQIRDLAKGVE 250
>gi|401881497|gb|EJT45796.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 2479]
gi|406696503|gb|EKC99788.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 1120
Score = 91.3 bits (225), Expect = 4e-16, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 98 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLV 156
I Y + + AP +L + ++ +++R + I V G D P S+ LP +
Sbjct: 405 AIDYEPFRRNFYTAPAEVLDMDEEEAELVRLEMDGIKVRGLDAPKPVRSWGAFGLPLGCL 464
Query: 157 RALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL 216
+ AK PT IQ Q IP+ +SGRD+IGIA TGSGKT+ F+LP+L +Q P
Sbjct: 465 EVIRAKEWGAPTAIQAQSIPSIMSGRDVIGIAKTGSGKTIAFLLPLLRHVKDQR---PVS 521
Query: 217 PGEGPYGLIICPSRELARQTH 237
+GP LI+ P+RELA Q +
Sbjct: 522 GMDGPIALILAPTRELAMQIY 542
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+L +Q P +GP LI+ P+RELA Q +
Sbjct: 488 SGRDVIGIAKTGSGKTIAFLLPLLRHVKDQR---PVSGMDGPIALILAPTRELAMQIYKE 544
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + + + C +GG ++ + +KKG +
Sbjct: 545 SKPFAKVMNLRVTCC--VGGQSISDDIAAMKKGAE 577
>gi|299747858|ref|XP_001837294.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
gi|298407711|gb|EAU84911.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
Length = 1081
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 99 IQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVR 157
+QY K + P I S+ + +++R L I + G D P + LP S +
Sbjct: 375 VQYEPFRKEFYIPPPDIASMTEDEAELLRLALDGIKIRGVDCPKPVIKWSHFGLPASCIE 434
Query: 158 ALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP 217
++ PT IQ Q IPA +SGRD+IG+A TGSGKT+ F+LP+ +Q P
Sbjct: 435 VIKRLNYTAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQR---PLEQ 491
Query: 218 GEGPYGLIICPSRELARQTH 237
EGP L++ P+RELA Q H
Sbjct: 492 MEGPMALVMTPTRELAVQIH 511
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F+LP+ +Q P EGP L++ P+RELA Q H
Sbjct: 457 SGRDVIGVAKTGSGKTIAFLLPLFRHIKDQR---PLEQMEGPMALVMTPTRELAVQIHKD 513
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 514 CKPFLKVL--GLRAVCAYGGSPIKDQIAELKKGAE 546
>gi|302412236|ref|XP_003003951.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
gi|261357856|gb|EEY20284.1| ATP-dependent rRNA helicase RRP3 [Verticillium albo-atrum VaMs.102]
Length = 486
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 63/99 (63%), Gaps = 8/99 (8%)
Query: 137 DDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTL 196
DD P A SF + + ESLV A EA G K PTPIQ + IP AL+GRD+IG+A TGSGKT
Sbjct: 54 DDAPVAKKSFADLGVVESLVEATEALGYKHPTPIQEKSIPLALAGRDVIGLAETGSGKTA 113
Query: 197 VFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
F LP+L LE+ + G + +++ P+RELA Q
Sbjct: 114 AFALPVLQALLEKPS--------GLFAVVMAPTRELAAQ 144
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD+IG+A TGSGKT F LP+L LE+ + G + +++ P+RELA Q I Q
Sbjct: 99 RDVIGLAETGSGKTAAFALPVLQALLEKPS--------GLFAVVMAPTRELAAQ---IAQ 147
Query: 68 YYCA-ALPIPLRTCLAIGGVPMNQ 90
+ A I LR + +GG+ M Q
Sbjct: 148 TFEALGSLINLRCAVIVGGLDMVQ 171
>gi|242022378|ref|XP_002431617.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
gi|212516925|gb|EEB18879.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
Length = 788
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G +P +++ K+P+ ++ +E G + TPIQ Q IP L RDI
Sbjct: 341 IFREDYNITIKGGKIPDPIRNWKEAKIPQEILDIIERVGYTEATPIQRQAIPIGLQNRDI 400
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL--PGEGPYGLIICPSRELARQTHD 238
IG+A TGSGKTL F++P++M+ ++ K+ + +GPY +I+ P+RELA+Q +
Sbjct: 401 IGVAETGSGKTLAFLIPLIMW-IQSLPKIQRMEDADQGPYAIILAPTRELAQQIEE 455
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 5/82 (6%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL--PGEGPYGLIICPSRELARQTHD 64
+RDIIG+A TGSGKTL F++P++M+ ++ K+ + +GPY +I+ P+RELA+Q +
Sbjct: 397 NRDIIGVAETGSGKTLAFLIPLIMW-IQSLPKIQRMEDADQGPYAIILAPTRELAQQIEE 455
Query: 65 IIQYYCAALPIPLRTCLAIGGV 86
+ P+ +RT + +GG+
Sbjct: 456 ETNKF--GNPLGIRTVVVVGGL 475
>gi|260809351|ref|XP_002599469.1| hypothetical protein BRAFLDRAFT_122755 [Branchiostoma floridae]
gi|229284748|gb|EEN55481.1| hypothetical protein BRAFLDRAFT_122755 [Branchiostoma floridae]
Length = 623
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 5/112 (4%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
R + V+G +VP F P+ ++ + +KPTPIQ QG P AL GRDI+G
Sbjct: 93 RAEREVTVQGRNVPKPVIEFHYASFPDYVMEEIRNAQFEKPTPIQAQGWPVALQGRDIVG 152
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTH 237
IA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 153 IAQTGSGKTLAYMLPAIVHINHQ----PYLERGDGPICLVLTPTRELAQQVQ 200
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RDI+GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 148 RDIVGIAQTGSGKTLAYMLPAIVHINHQ----PYLERGDGPICLVLTPTRELAQQVQQEA 203
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I TC+ GG P + +++G++
Sbjct: 204 SKFGRSSRIK-NTCV-FGGSPKGPQIRDLERGVE 235
>gi|302696669|ref|XP_003038013.1| hypothetical protein SCHCODRAFT_43190 [Schizophyllum commune H4-8]
gi|300111710|gb|EFJ03111.1| hypothetical protein SCHCODRAFT_43190, partial [Schizophyllum
commune H4-8]
Length = 674
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 112 PRCILSLPDQVHDIIRRNLR-ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPI 170
P I S+ D D++R L I + G D P + LP S + ++ PTPI
Sbjct: 47 PPDIASMTDDEADLLRLELDGIKIRGIDCPRPVTKWSHFGLPASCLDVIKRLNYTAPTPI 106
Query: 171 QVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSR 230
Q Q +PA +SGRD+IG+A TGSGKT+ F++P+ +Q P P EGP L++ P+R
Sbjct: 107 QAQAVPAIMSGRDVIGVAKTGSGKTIAFLIPLFRHIKDQR---PLEPMEGPIALVMTPTR 163
Query: 231 ELARQTH 237
ELA Q H
Sbjct: 164 ELATQIH 170
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IG+A TGSGKT+ F++P+ +Q P P EGP L++ P+RELA Q H
Sbjct: 116 SGRDVIGVAKTGSGKTIAFLIPLFRHIKDQR---PLEPMEGPIALVMTPTRELATQIHRE 172
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + L LR A GG P+ + +KKG +
Sbjct: 173 CKPFLKVL--NLRAVCAYGGSPIKDQIADLKKGAE 205
>gi|189520693|ref|XP_001923830.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Danio rerio]
Length = 671
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 127 RRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIG 186
RR I V G P +F + P+ ++ L + K+PT IQ QG P ALSGRD++G
Sbjct: 78 RRKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVG 137
Query: 187 IAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCA 245
IA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q + Y
Sbjct: 138 IAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAFDYGK 193
Query: 246 ALPIGS 251
+ I S
Sbjct: 194 SSRIKS 199
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 131 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 186
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y + I TC+ GG P + +++G++
Sbjct: 187 VAFDYGKSSRIK-STCV-YGGAPKGPQIRDLERGVE 220
>gi|440893800|gb|ELR46448.1| Putative ATP-dependent RNA helicase DDX59 [Bos grunniens mutus]
Length = 620
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
DQ+ D +RR L I V G VP F PE+L R L+A G + PTPIQ+Q IP L
Sbjct: 181 DQI-DNLRRQLGITVRGRGVPRPIVDFEHCGFPEALNRNLKASGYEVPTPIQMQMIPVGL 239
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
GRD++ A TGSGKT F+LP+++ L Q + P GL++ P+RELA Q
Sbjct: 240 LGRDVLASADTGSGKTAAFLLPVILRALSQ--------SKSPSGLVLTPTRELAIQIERQ 291
Query: 240 IQYYCAALP 248
+ + LP
Sbjct: 292 AKELMSGLP 300
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 22/121 (18%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
RD++ A TGSGKT F+LP+++ L Q + P GL++ P+RELA Q +
Sbjct: 242 RDVLASADTGSGKTAAFLLPVILRALSQ--------SKSPSGLVLTPTRELAIQIERQAK 293
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIR 127
+ LP LRT L +GG+P +++ IQ I++ P ++ DII+
Sbjct: 294 ELMSGLPC-LRTALLVGGLPAPPQRHRLRQRIQ-------------VIIATPGRLLDIIK 339
Query: 128 R 128
+
Sbjct: 340 Q 340
>gi|406699116|gb|EKD02333.1| hypothetical protein A1Q2_03389 [Trichosporon asahii var. asahii
CBS 8904]
Length = 437
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
RR + ++G ++P SF PE ++ + A G K+P+PIQ Q P ALSGRD++
Sbjct: 93 FRRAKDMRIQGTNIPRPITSFEEAGFPEYVMSEIRAMGFKEPSPIQCQAWPMALSGRDVV 152
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q IQ C
Sbjct: 153 AIAETGSGKTISFALPAMVHINAQ----PLLAPGDGPIVLILAPTRELAVQ----IQAEC 204
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 147 SGRDVVAIAETGSGKTISFALPAMVHINAQ----PLLAPGDGPIVLILAPTRELAVQ--- 199
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKG 98
IQ C +R GG P + +++G
Sbjct: 200 -IQAECTKFGKSSRIRNTAVYGGAPKGAQIRDLQRG 234
>gi|320589197|gb|EFX01659.1| dead deah box DNA helicase [Grosmannia clavigera kw1407]
Length = 734
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 10/130 (7%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I G +P ++R LP L+ +EA G +PTPIQ IP AL GRD+
Sbjct: 284 IFKEDFGIATRGGSIPDPMRNWRESPLPPRLLDVVEAVGYTEPTPIQRAAIPIALQGRDL 343
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTHDII 240
IG+A TGSGKT F+LP+L++ E LP L +GPY LI+ P+RELA+Q
Sbjct: 344 IGVAVTGSGKTAAFLLPLLVYIKE----LPPLDEISKNDGPYALILAPTRELAQQIESEA 399
Query: 241 QYYCAALPIG 250
+ + A P G
Sbjct: 400 RKF--ATPFG 407
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 30/141 (21%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTH 63
RD+IG+A TGSGKT F+LP+L++ E LP L +GPY LI+ P+RELA+Q
Sbjct: 341 RDLIGVAVTGSGKTAAFLLPLLVYIKE----LPPLDEISKNDGPYALILAPTRELAQQIE 396
Query: 64 DIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVH 123
+ + A P +GG + + ++ G + +++ P ++
Sbjct: 397 SEARKF--ATPFGYTVVSIVGGHSLEEQAYALRNGAE-------------IVVATPGRLV 441
Query: 124 DIIRRNLRILVEGDDVPPACC 144
D I R L +L + CC
Sbjct: 442 DCIERRLLVLSQ-------CC 455
>gi|331238187|ref|XP_003331749.1| hypothetical protein PGTG_12914 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310739|gb|EFP87330.1| hypothetical protein PGTG_12914 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 834
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
++ D+ I R + I G ++P S+ KLP ++ ++ G K+P+PIQ Q IP
Sbjct: 371 AMRDRDWRIFREDFSIAARGGNIPNPMRSWEESKLPLQILEIIDEVGYKEPSPIQRQAIP 430
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSREL 232
L+ RD+IGIA TGSGKT FV+P+L + KLP L + GPY LI+ P+REL
Sbjct: 431 LGLNNRDLIGIAETGSGKTASFVIPMLTYI----GKLPPLTDDNRHLGPYALILAPTREL 486
Query: 233 ARQ 235
A+Q
Sbjct: 487 AQQ 489
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 23/132 (17%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGE----GPYGLIICPSRELARQ 61
N+RD+IGIA TGSGKT FV+P+L + KLP L + GPY LI+ P+RELA+Q
Sbjct: 434 NNRDLIGIAETGSGKTASFVIPMLTYI----GKLPPLTDDNRHLGPYALILAPTRELAQQ 489
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQ 121
++ AL + R +GG M + ++ G + I++ P +
Sbjct: 490 IE--VETNKFALRLGYRCVSIVGGKAMEEQALNMRDGAE-------------IIIATPGR 534
Query: 122 VHDIIRRNLRIL 133
+ D I R++ +L
Sbjct: 535 LKDCIERHVLVL 546
>gi|224064557|ref|XP_002301515.1| predicted protein [Populus trichocarpa]
gi|222843241|gb|EEE80788.1| predicted protein [Populus trichocarpa]
Length = 807
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 90 QSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLM 149
Q+LD I+Y K + I + +Q ++L I V G +VP +F
Sbjct: 173 QALD--HGSIEYEPFSKDFYEESPSISEMSEQDVAEYMKSLAIRVSGFEVPRPIKTFEDC 230
Query: 150 KLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQ 209
L+ A+ +G +KPTPIQ Q +P LSG DIIG+A TGSGKT FVLP+++ ++Q
Sbjct: 231 GFSPQLMNAIAKQGYEKPTPIQCQALPIVLSGSDIIGMAKTGSGKTAAFVLPMIVHIMDQ 290
Query: 210 ETKLPFLPG-EGPYGLIICPSRELARQTH 237
P L EGP G++ P+RELA Q +
Sbjct: 291 ----PELEKEEGPIGVVCAPTRELAHQIY 315
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTH 63
DIIG+A TGSGKT FVLP+++ ++Q P L EGP G++ P+RELA Q +
Sbjct: 264 DIIGMAKTGSGKTAAFVLPMIVHIMDQ----PELEKEEGPIGVVCAPTRELAHQIY 315
>gi|224124820|ref|XP_002319430.1| predicted protein [Populus trichocarpa]
gi|222857806|gb|EEE95353.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
Query: 87 PMNQSLDVIKKGIQYNDPIKTSWR-APRCILSLPDQVHDIIRR-NLRILVEGDD--VPPA 142
P +S + I P+ +W + R + PDQ+ +I R N+ + V P A
Sbjct: 54 PSRRSSGAFSRTISVPQPVFPNWTPSDRVLRFNPDQIAEIRSRLNIDVSVASGSPLAPAA 113
Query: 143 CCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPI 202
SF M L +S+++ + +PT IQ Q + ALSGRD++G A TGSGKT F +P+
Sbjct: 114 IESFEDMCLHQSIMKDIAHHEYTRPTSIQAQAMTVALSGRDLLGCAETGSGKTAAFTIPM 173
Query: 203 LMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAAL 247
+ CL Q T G+GP L++ P+RELA+Q ++ + +L
Sbjct: 174 IQHCLAQPT---VRRGDGPLALVLAPTRELAQQIEKEVKGFSRSL 215
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 1 MVTYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELAR 60
M + RD++G A TGSGKT F +P++ CL Q T G+GP L++ P+RELA+
Sbjct: 146 MTVALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPT---VRRGDGPLALVLAPTRELAQ 202
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGI 99
Q ++ + +L RT + +GG + ++ G+
Sbjct: 203 QIEKEVKGFSRSLE-SFRTAIVVGGTNIADQRLELRAGV 240
>gi|298704856|emb|CBJ28373.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 519
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I+++G+ +P +F +PE ++R + +G PTPIQ QG P AL GRD++GI+ TG
Sbjct: 114 IVIQGEGIPKPAMTFEEASMPEYVLREVMKQGFSAPTPIQSQGWPMALLGRDMVGISATG 173
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQ 235
SGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q
Sbjct: 174 SGKTLAFLLPAMIHINAQ----PYLEQGDGPIVLVVAPTRELAVQ 214
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDII 66
RD++GI+ TGSGKTL F+LP ++ Q P+L G+GP L++ P+RELA Q +
Sbjct: 164 RDMVGISATGSGKTLAFLLPAMIHINAQ----PYLEQGDGPIVLVVAPTRELAVQIKEEC 219
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I TC+ GGVP ++ + +G++
Sbjct: 220 DKFGRSSEIK-NTCV-YGGVPKRIQVNDLNRGVE 251
>gi|400260696|pdb|4A4D|A Chain A, Crystal Structure Of The N-Terminal Domain Of The Human
Dead-Box Rna Helicase Ddx5 (P68)
Length = 253
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ I V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 23 ETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 82
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 83 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 138
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 139 YCRACRLKS 147
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 82 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 137
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A L++ GG P + +++G++
Sbjct: 138 EYCRA--CRLKSTCIYGGAPKGPQIRDLERGVE 168
>gi|67971318|dbj|BAE02001.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 124 DIIRRNLRILVEGDDV-PPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGR 182
D +RR I V G DV P +F P+ ++ L + +PTPIQ QG P ALSGR
Sbjct: 71 DELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGR 130
Query: 183 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 241
D++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAD 186
Query: 242 YY 243
Y
Sbjct: 187 DY 188
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 30/157 (19%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL ++LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 128 SGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 183
Query: 65 IIQYY--CAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ-----------YNDPIKTSWRA 111
+ Y C+ L TC+ GG P + +++G++ + + KT+ R
Sbjct: 184 VADDYGKCSRLK---STCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLR- 238
Query: 112 PRC---ILSLPDQVHDI-IRRNLRILVEGDDVPPACC 144
RC +L D++ D+ +R +V D + P CC
Sbjct: 239 -RCTYLVLDEADRMLDMGFEPQIRKIV--DQIRPVCC 272
>gi|358397215|gb|EHK46590.1| hypothetical protein TRIATDRAFT_291734 [Trichoderma atroviride IMI
206040]
Length = 549
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR ++ + G DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 121 EAFRRKHQMTIAGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 180
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 181 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLSPGDGPIVLILAPTRELAVQIQQEISK 236
Query: 243 Y 243
+
Sbjct: 237 F 237
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 177 SGRDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLSPGDGPIVLILAPTRELAVQIQQ 232
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
I + + I R GGVP + + +G++
Sbjct: 233 EISKFGRSSRI--RNTCVYGGVPKGPQIRDLSRGVE 266
>gi|121707307|ref|XP_001271794.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359800|sp|A1CHL3.1|PRP28_ASPCL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|119399942|gb|EAW10368.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 798
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G VP S+ LP+ L+ ++ G K+PTPIQ IP AL RD+
Sbjct: 347 IFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDRVGYKEPTPIQRAAIPIALQSRDL 406
Query: 185 IGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQ 235
IG+A TGSGKT F+LP+L++ E + + + +GPY +++ P+RELA+Q
Sbjct: 407 IGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQ 459
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 24/140 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLE--QETKLPFLPGEGPYGLIICPSRELARQTHD 64
SRD+IG+A TGSGKT F+LP+L++ E + + + +GPY +++ P+RELA+Q
Sbjct: 403 SRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIE- 461
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
I+ P+ +GG + + ++ G + I++ P ++ D
Sbjct: 462 -IEAKKFTQPLGFNVVSIVGGHSLEEQAYSLRNGAE-------------IIIATPGRLVD 507
Query: 125 IIRRNLRILVEGDDVPPACC 144
I R + +L + CC
Sbjct: 508 CIERRILVLSQ-------CC 520
>gi|41054055|ref|NP_956176.1| probable ATP-dependent RNA helicase DDX23 [Danio rerio]
gi|38014376|gb|AAH60524.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Danio rerio]
Length = 807
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 118 LPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPA 177
+ D+ I R + I +G +P +++ LP ++ +E G K PTPIQ Q IP
Sbjct: 352 MTDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPI 411
Query: 178 ALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSREL 232
L RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+REL
Sbjct: 412 GLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAIILAPTREL 467
Query: 233 ARQTHD 238
A+Q +
Sbjct: 468 AQQIEE 473
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-----PGEGPYGLIICPSRELARQ 61
+RDIIG+A TGSGKT F++P+L++ T LP + +GPY +I+ P+RELA+Q
Sbjct: 415 NRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAIILAPTRELAQQ 470
Query: 62 T-HDIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT IGG+
Sbjct: 471 IEEETIKF---GKPLGIRTVAVIGGI 493
>gi|297735665|emb|CBI18352.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 8/118 (6%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + + +G +P S+ KL L++A+E G K P+PIQ+ IP L RD+
Sbjct: 191 IFREDFNVSYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDV 250
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQTHD 238
IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q D
Sbjct: 251 IGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIED 304
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL----PGEGPYGLIICPSRELARQ 61
RD+IGIA TGSGKT FVLP+L + ++LP + EGPY +++ P+RELA+Q
Sbjct: 246 QQRDVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQ 301
Query: 62 THDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
D + L I + + +GG + + I++G
Sbjct: 302 IEDETVKFAHYLGIKVVSI--VGGQSIEEQGFRIRQG 336
>gi|354544992|emb|CCE41717.1| hypothetical protein CPAR2_802670 [Candida parapsilosis]
Length = 562
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ R + V+G D+P +F P+ ++ L+A+G KPT IQ QG P ALSGRD
Sbjct: 105 EAFRAENEMSVQGHDIPHPITNFDEAGFPDYVLSELKAQGFPKPTAIQCQGWPMALSGRD 164
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q IQ
Sbjct: 165 MVGIAATGSGKTLSYALPGIVHINAQ----PLLKPGDGPIVLVLAPTRELACQ----IQT 216
Query: 243 YCAALPIGS 251
C+ S
Sbjct: 217 ECSKFGSSS 225
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 13/99 (13%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 161 SGRDMVGIAATGSGKTLSYALPGIVHINAQ----PLLKPGDGPIVLVLAPTRELACQ--- 213
Query: 65 IIQYYCAALPIPLR---TCLAIGGVPMNQSLDVIKKGIQ 100
IQ C+ R TC+ GG P + + +G++
Sbjct: 214 -IQTECSKFGSSSRIRNTCV-YGGAPKGPQVRDLARGVE 250
>gi|291406391|ref|XP_002719530.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 3
[Oryctolagus cuniculus]
Length = 614
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ + V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEVTVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|145353388|ref|XP_001420996.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357383|ref|XP_001422899.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581232|gb|ABO99289.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583143|gb|ABP01258.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 452
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 15/159 (9%)
Query: 93 DVIKKGIQYNDPIKTSWRAPRCILSLPDQVHDIIR-RNLRILVEGDDVPPACCSFRLMKL 151
+V K + + P T+ R+ R D +R R +R+ V G DVP +F
Sbjct: 22 EVFSKNLYFEHP-STTARSARA-------TEDAMRARGVRV-VRGADVPKIVTTFEEASF 72
Query: 152 PESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQET 211
P ++ L+ +G+ PTP Q Q P ALSGRD+I +A TGSGKTL +VLP ++ Q
Sbjct: 73 PAYVMDDLKERGLATPTPCQCQAWPIALSGRDLIAVAETGSGKTLAYVLPAIVHVNAQ-- 130
Query: 212 KLPFLP-GEGPYGLIICPSRELARQTHDIIQYYCAALPI 249
P L GEGP L++ P+RELA Q + + A+ I
Sbjct: 131 --PVLEKGEGPIALVLAPTRELASQIELEVAKFAASSEI 167
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD+I +A TGSGKTL +VLP ++ Q P L GEGP L++ P+RELA Q
Sbjct: 101 SGRDLIAVAETGSGKTLAYVLPAIVHVNAQ----PVLEKGEGPIALVLAPTRELASQIEL 156
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
+ + A+ I C+ GGVP + +K G
Sbjct: 157 EVAKFAASSEIK-HACV-TGGVPKGPQIKALKSG 188
>gi|268572017|ref|XP_002641212.1| Hypothetical protein CBG09074 [Caenorhabditis briggsae]
Length = 732
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 109 WRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPT 168
WR + + + D+ I R + I ++G VP ++ P+ + RA++ G +PT
Sbjct: 269 WRM-KELSEMTDRDWRIFREDFNISIKGGKVPRPLRNWEESGFPDEVYRAVQEIGYLEPT 327
Query: 169 PIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-----GEGPYG 223
PIQ Q IP L RD+IG+A TGSGKT F+LP+L++ T LP + +GPY
Sbjct: 328 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWI----TSLPKIERQEHSDQGPYA 383
Query: 224 LIICPSRELARQTHDIIQYYCAALPI 249
+I+ P+RELA Q + + L I
Sbjct: 384 IILAPTRELATQIEEETNKFGKLLGI 409
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-----GEGPYGLIICPSRELAR 60
+RD+IG+A TGSGKT F+LP+L++ T LP + +GPY +I+ P+RELA
Sbjct: 339 QNRDVIGVAETGSGKTAAFLLPLLVWI----TSLPKIERQEHSDQGPYAIILAPTRELAT 394
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q + + L I RT IGG + ++ G++
Sbjct: 395 QIEEETNKFGKLLGI--RTVSVIGGASREEQGMKLRMGVE 432
>gi|401889158|gb|EJT53098.1| ATP-dependent RNA helicase DBP2 (p68-like protein) [Trichosporon
asahii var. asahii CBS 2479]
Length = 387
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
RR + ++G ++P SF PE ++ + A G K+P+PIQ Q P ALSGRD++
Sbjct: 43 FRRAKDMRIQGTNIPRPITSFEEAGFPEYVMSEIRAMGFKEPSPIQCQAWPMALSGRDVV 102
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q IQ C
Sbjct: 103 AIAETGSGKTISFALPAMVHINAQ----PLLAPGDGPIVLILAPTRELAVQ----IQAEC 154
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++ IA TGSGKT+ F LP ++ Q P L PG+GP LI+ P+RELA Q
Sbjct: 97 SGRDVVAIAETGSGKTISFALPAMVHINAQ----PLLAPGDGPIVLILAPTRELAVQ--- 149
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKG 98
IQ C +R GG P + +++G
Sbjct: 150 -IQAECTKFGKSSRIRNTAVYGGAPKGAQIRDLQRG 184
>gi|380016586|ref|XP_003692261.1| PREDICTED: ATP-dependent RNA helicase p62-like [Apis florea]
Length = 529
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D+ R+ +I ++G+ +P F P+ +++ + +G +PT IQ QG P A+SG +
Sbjct: 95 DMFRQENQITLKGEKIPNPIQHFEEGNFPDHVMQCIRKQGFSEPTAIQAQGWPIAMSGHN 154
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 239
++GIA TGSGKTL ++LP ++ Q+ P G+GP LI+ P+RELA+Q +
Sbjct: 155 MVGIAQTGSGKTLGYILPAIVHISSQQ---PLNHGDGPIALILAPTRELAQQIQKV 207
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQY 68
+++GIA TGSGKTL ++LP ++ Q+ P G+GP LI+ P+RELA+Q IQ
Sbjct: 154 NMVGIAQTGSGKTLGYILPAIVHISSQQ---PLNHGDGPIALILAPTRELAQQ----IQK 206
Query: 69 YCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ TC+ GG P +++G++
Sbjct: 207 VTCSFGYVRSTCI-FGGAPKGSQARDLEQGVE 237
>gi|119500728|ref|XP_001267121.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
gi|143359899|sp|A1CX72.1|PRP28_NEOFI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|119415286|gb|EAW25224.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
Length = 796
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I + + I +G VP S+ LP+ L+ ++ G K+PTPIQ IP AL RD+
Sbjct: 345 IFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDL 404
Query: 185 IGIAFTGSGKTLVFVLPILMFC--LEQETKLPFLPGEGPYGLIICPSRELARQ 235
IG+A TGSGKT F+LP+L++ L + + + +GPY +++ P+RELA+Q
Sbjct: 405 IGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQ 457
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 24/140 (17%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFC--LEQETKLPFLPGEGPYGLIICPSRELARQTHD 64
SRD+IG+A TGSGKT F+LP+L++ L + + + +GPY +++ P+RELA+Q
Sbjct: 401 SRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIE- 459
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQYNDPIKTSWRAPRCILSLPDQVHD 124
I+ P+ +GG + ++ G + I++ P ++ D
Sbjct: 460 -IEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAE-------------IIIATPGRLVD 505
Query: 125 IIRRNLRILVEGDDVPPACC 144
I R L +L + CC
Sbjct: 506 CIERRLLVLSQ-------CC 518
>gi|51263|emb|CAA46581.1| p68 RNA helicase [Mus musculus]
Length = 614
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D RR+ I V G + P +F P +++ + +PT IQ QG P ALSG D
Sbjct: 74 DTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARHNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHH----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHH----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|320580546|gb|EFW94768.1| ATP-dependent RNA helicase [Ogataea parapolymorpha DL-1]
Length = 529
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 106 KTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIK 165
K ++ + S + R+ + V G D+P SF P+ +++ ++A+G
Sbjct: 58 KNFYKEAEAVASRSEDEVAAFRKEHDMTVYGRDIPRPITSFDEAGFPDYVLKEVKAQGFP 117
Query: 166 KPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGL 224
PT IQ QG P ALSGRD++GIA TGSGKTL + LP ++ Q P L PG+GP L
Sbjct: 118 NPTAIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPAIVHINAQ----PLLQPGDGPICL 173
Query: 225 IICPSRELARQTHDIIQYYCAAL 247
++ P+RELA Q IQ C+
Sbjct: 174 VLAPTRELAVQ----IQKECSKF 192
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 132 SGRDMVGIASTGSGKTLSYCLPAIVHINAQ----PLLQPGDGPICLVLAPTRELAVQ--- 184
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C+ +R GGVP Q + + +G +
Sbjct: 185 -IQKECSKFGRSSRIRNTCVYGGVPKGQQIRDLARGAE 221
>gi|444726978|gb|ELW67488.1| putative ATP-dependent RNA helicase DDX5 [Tupaia chinensis]
Length = 614
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
+ RR+ + V G + P +F P +++ + + +PT IQ QG P ALSG D
Sbjct: 74 ETYRRSKEVTVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD 133
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQY 242
++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 134 MVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAE 189
Query: 243 YCAALPIGS 251
YC A + S
Sbjct: 190 YCRACRLKS 198
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 188
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A + TC+ GG P + +++G++
Sbjct: 189 EYCRACRLK-STCI-YGGAPKGPQIRDLERGVE 219
>gi|160380611|sp|A6ZRX0.1|DBP2_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP2; AltName: Full=DEAD
box protein 2; AltName: Full=p68-like protein
gi|151944424|gb|EDN62702.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|190409099|gb|EDV12364.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|259149249|emb|CAY82491.1| Dbp2p [Saccharomyces cerevisiae EC1118]
gi|349580827|dbj|GAA25986.1| K7_Dbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 546
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + + G D+P +F P+ ++ ++A+G KPT IQ QG P ALSGRD++
Sbjct: 95 FRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q IQ C
Sbjct: 155 GIAATGSGKTLSYCLPGIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----IQTEC 206
Query: 245 AAL 247
+
Sbjct: 207 SKF 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 151 RDMVGIAATGSGKTLSYCLPGIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----I 202
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C+ +R GGVP +Q + + +G +
Sbjct: 203 QTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSE 238
>gi|195588318|ref|XP_002083905.1| GD13105 [Drosophila simulans]
gi|194195914|gb|EDX09490.1| GD13105 [Drosophila simulans]
Length = 814
Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 66/109 (60%), Gaps = 5/109 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I ++GD VP F P+ ++ + +G KPT IQ QG P A+SGRD++G+A TG
Sbjct: 142 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTG 201
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
SGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q +
Sbjct: 202 SGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQV 246
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++G+A TGSGKTL +VLP ++ Q P L G+GP L++ P+RELA+Q
Sbjct: 190 SGRDLVGVAQTGSGKTLAYVLPAVVHINNQ----PRLERGDGPIALVLAPTRELAQQIQQ 245
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + + R GG P Q +++G++
Sbjct: 246 VAIEFGSNTHV--RNTCIFGGAPKGQQARDLERGVE 279
>gi|1183961|emb|CAA93395.1| RNA elicase [Saccharomyces cerevisiae]
Length = 547
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + + G D+P +F P+ ++ ++A+G KPT IQ QG P ALSGRD++
Sbjct: 95 FRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q IQ C
Sbjct: 155 GIAATGSGKTLSYCLPGIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----IQTEC 206
Query: 245 AAL 247
+
Sbjct: 207 SKF 209
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 151 RDMVGIAATGSGKTLSYCLPGIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----I 202
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C+ +R GGVP +Q + + +G +
Sbjct: 203 QTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSE 238
>gi|312375100|gb|EFR22532.1| hypothetical protein AND_15065 [Anopheles darlingi]
Length = 821
Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G +P ++ P+ ++ ++ G K PTPIQ Q IP L RDI
Sbjct: 374 IFREDYNITIKGGKIPNPIRNWIESGFPKEILEIIDKVGYKDPTPIQRQAIPIGLQNRDI 433
Query: 185 IGIAFTGSGKTLVFVLPILMFCL------EQETKLPFLPGEGPYGLIICPSRELARQTHD 238
IGIA TGSGKTL F++P+L + QET +GPY +I+ P+RELA+Q +
Sbjct: 434 IGIAETGSGKTLAFLIPLLTWIQSLPKIERQETA-----DQGPYAIILAPTRELAQQIEE 488
Query: 239 IIQYYCAALPI 249
Q + L I
Sbjct: 489 ETQKFGTPLGI 499
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 13/86 (15%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCL------EQETKLPFLPGEGPYGLIICPSRELAR 60
+RDIIGIA TGSGKTL F++P+L + QET +GPY +I+ P+RELA+
Sbjct: 430 NRDIIGIAETGSGKTLAFLIPLLTWIQSLPKIERQETA-----DQGPYAIILAPTRELAQ 484
Query: 61 QTHDIIQYYCAALPIPLRTCLAIGGV 86
Q + Q + P+ +RT + +GG+
Sbjct: 485 QIEEETQKF--GTPLGIRTVVVVGGL 508
>gi|256273812|gb|EEU08734.1| Dbp2p [Saccharomyces cerevisiae JAY291]
Length = 547
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + + G D+P +F P+ ++ ++A+G KPT IQ QG P ALSGRD++
Sbjct: 95 FRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q IQ C
Sbjct: 155 GIAATGSGKTLSYCLPGIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----IQTEC 206
Query: 245 AAL 247
+
Sbjct: 207 SKF 209
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 151 RDMVGIAATGSGKTLSYCLPGIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----I 202
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C+ +R GGVP +Q + + +G +
Sbjct: 203 QTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSE 238
>gi|348527894|ref|XP_003451454.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Oreochromis niloticus]
Length = 1038
Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G P ++ + ++ AL+ G +KPTPIQ Q IPA +SGRD+IGIA TG
Sbjct: 349 ITVKGKGCPKPIKTWVQCGVSMKILNALKKHGYEKPTPIQAQAIPAIMSGRDLIGIAKTG 408
Query: 192 SGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQ 235
SGKT+ F+LP+ ++Q P EGP +I+ P+RELA Q
Sbjct: 409 SGKTIAFLLPMFRHIMDQR---PLEESEGPISVIMTPTRELALQ 449
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDI 65
+ RD+IGIA TGSGKT+ F+LP+ ++Q P EGP +I+ P+RELA Q
Sbjct: 397 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR---PLEESEGPISVIMTPTRELALQITKE 453
Query: 66 IQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + + P+ LR GG +++ + +K+G +
Sbjct: 454 CKKF--SKPLGLRVVCVYGGTGISEQIAELKRGAE 486
>gi|218681960|pdb|3FE2|A Chain A, Human Dead-Box Rna Helicase Ddx5 (P68), Conserved Domain I
In Complex With Adp
gi|218681961|pdb|3FE2|B Chain B, Human Dead-Box Rna Helicase Ddx5 (P68), Conserved Domain I
In Complex With Adp
Length = 242
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 121 QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
Q + RR+ I V G + P +F P +++ + + +PT IQ QG P ALS
Sbjct: 6 QEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALS 65
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
G D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 66 GLDMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQV 121
Query: 240 IQYYCAALPIGS 251
YC A + S
Sbjct: 122 AAEYCRACRLKS 133
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 9 DIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDIIQ 67
D++G+A TGSGKTL ++LP ++ Q PFL G+GP L++ P+RELA+Q +
Sbjct: 68 DMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAA 123
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
YC A L++ GG P + +++G++
Sbjct: 124 EYCRA--CRLKSTCIYGGAPKGPQIRDLERGVE 154
>gi|398364809|ref|NP_014287.3| Dbp2p [Saccharomyces cerevisiae S288c]
gi|118284|sp|P24783.1|DBP2_YEAST RecName: Full=ATP-dependent RNA helicase DBP2; AltName: Full=DEAD
box protein 2; AltName: Full=p68-like protein
gi|5272|emb|CAA36874.1| p68 protein [Saccharomyces cerevisiae]
gi|1302034|emb|CAA95991.1| DBP2 [Saccharomyces cerevisiae]
gi|285814541|tpg|DAA10435.1| TPA: Dbp2p [Saccharomyces cerevisiae S288c]
Length = 546
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
Query: 126 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDII 185
R+ + + G D+P +F P+ ++ ++A+G KPT IQ QG P ALSGRD++
Sbjct: 95 FRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMV 154
Query: 186 GIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQYYC 244
GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q IQ C
Sbjct: 155 GIAATGSGKTLSYCLPGIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----IQTEC 206
Query: 245 AAL 247
+
Sbjct: 207 SKF 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 11/96 (11%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q I
Sbjct: 151 RDMVGIAATGSGKTLSYCLPGIVHINAQ----PLLAPGDGPIVLVLAPTRELAVQ----I 202
Query: 67 QYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
Q C+ +R GGVP +Q + + +G +
Sbjct: 203 QTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSE 238
>gi|195032613|ref|XP_001988529.1| GH11216 [Drosophila grimshawi]
gi|193904529|gb|EDW03396.1| GH11216 [Drosophila grimshawi]
Length = 864
Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G +P S+ P ++ ++ G K+PTPIQ Q IP L RDI
Sbjct: 417 IFREDYNITIKGGKIPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGLQNRDI 476
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP--GEGPYGLIICPSRELARQTHD 238
IG+A TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q +
Sbjct: 477 IGVAETGSGKTLAFLIPLLSW-IQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 531
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP--GEGPYGLIICPSRELARQT-H 63
+RDIIG+A TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q
Sbjct: 473 NRDIIGVAETGSGKTLAFLIPLLSW-IQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 531
Query: 64 DIIQYYCAALPIPLRTCLAIGGV 86
+ I++ P+ +RT + +GG+
Sbjct: 532 ETIKF---GQPLGIRTVVVVGGL 551
>gi|302308420|ref|NP_985329.2| AFL221Cp [Ashbya gossypii ATCC 10895]
gi|442570093|sp|Q755N4.2|DBP2_ASHGO RecName: Full=ATP-dependent RNA helicase DBP2
gi|299790624|gb|AAS53153.2| AFL221Cp [Ashbya gossypii ATCC 10895]
gi|374108557|gb|AEY97463.1| FAFL221Cp [Ashbya gossypii FDAG1]
Length = 557
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 76/129 (58%), Gaps = 10/129 (7%)
Query: 120 DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 179
D+V + N +V G DVP +F PE +++ ++ +G +KPT IQ QG P AL
Sbjct: 91 DEVEQFRKENEMKIV-GHDVPKPIRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMAL 149
Query: 180 SGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 238
SGRD+IG+A TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 150 SGRDMIGVAATGSGKTLSYCLPGIVHINAQ----PLLSPGDGPVVLVLAPTRELAVQ--- 202
Query: 239 IIQYYCAAL 247
IQ C+
Sbjct: 203 -IQKECSKF 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 11/98 (11%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD+IG+A TGSGKTL + LP ++ Q P L PG+GP L++ P+RELA Q
Sbjct: 150 SGRDMIGVAATGSGKTLSYCLPGIVHINAQ----PLLSPGDGPVVLVLAPTRELAVQ--- 202
Query: 65 IIQYYCAAL--PIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
IQ C+ +R GGVP +Q + +++G++
Sbjct: 203 -IQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVE 239
>gi|120556730|ref|YP_961081.1| DEAD/DEAH box helicase [Marinobacter aquaeolei VT8]
gi|120326579|gb|ABM20894.1| DEAD/DEAH box helicase domain protein [Marinobacter aquaeolei VT8]
Length = 443
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 144 CSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTGSGKTLVFVLPIL 203
SF + L E LVRA +G + P+PIQ Q IPA LSG+D++ A TG+GKT F LP+L
Sbjct: 1 MSFSSLGLSEQLVRATADQGYETPSPIQQQAIPAVLSGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 204 MFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQYYCAALP 248
E G+GP LI+ P+RELA Q HD + Y +P
Sbjct: 61 QRLAENPR-----TGKGPRALILTPTRELAAQVHDSVNLYSKYVP 100
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQTHDIIQ 67
+D++ A TG+GKT F LP+L E G+GP LI+ P+RELA Q HD +
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLQRLAENPR-----TGKGPRALILTPTRELAAQVHDSVN 93
Query: 68 YYCAALPIPLRTCLAIGGVPMNQSLDVIKKGI 99
Y +P + + GGV +N + ++KG+
Sbjct: 94 LYSKY--VPTKAAVVFGGVKINPQMMKLRKGL 123
>gi|341900203|gb|EGT56138.1| hypothetical protein CAEBREN_02977 [Caenorhabditis brenneri]
Length = 982
Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 50/107 (46%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 132 ILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDIIGIAFTG 191
I V+G D P ++ L ++ L+ G KPT IQ Q IPA +SGRD+IGIA TG
Sbjct: 302 ITVKGIDPPKPIKTWAQCGLNLKMMNVLKKHGYTKPTSIQAQAIPAIMSGRDVIGIAKTG 361
Query: 192 SGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTH 237
SGKTL F+LP+ L+Q P L G+GP +I+ P+RELA QT+
Sbjct: 362 SGKTLAFLLPMFRHILDQ----PELEEGDGPIAIILAPTRELAMQTY 404
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHD 64
+ RD+IGIA TGSGKTL F+LP+ L+Q P L G+GP +I+ P+RELA QT+
Sbjct: 350 SGRDVIGIAKTGSGKTLAFLLPMFRHILDQ----PELEEGDGPIAIILAPTRELAMQTYK 405
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ L LR GGV +++ + +K+G +
Sbjct: 406 EANKFAKVL--GLRVACTYGGVGISEQIADLKRGAE 439
>gi|326531018|dbj|BAK04860.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531744|dbj|BAJ97876.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 415
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Query: 114 CILSLP-DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQV 172
C+ + ++V D ++ +L I V G DVP +F P L+ A+ +G +KPT IQ
Sbjct: 10 CVFGMSVEEVADYMK-SLAIRVSGFDVPRPVKNFEDCGFPVPLMNAIAKQGYEKPTTIQC 68
Query: 173 QGIPAALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRE 231
Q +P LSGRDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RE
Sbjct: 69 QALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRE 124
Query: 232 LARQTH 237
LA Q +
Sbjct: 125 LAHQIY 130
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPG-EGPYGLIICPSRELARQTHD 64
+ RDIIGIA TGSGKT FVLP+++ ++Q P L EGP G+I P+RELA Q +
Sbjct: 76 SGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ----PELQKEEGPIGVICAPTRELAHQIY- 130
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKG 98
++ A P L+ GGV + +K G
Sbjct: 131 -LEAKKFAKPYNLQVAAVYGGVSKFEQFKELKSG 163
>gi|134025992|gb|AAI35356.1| LOC549535 protein [Xenopus (Silurana) tropicalis]
Length = 420
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 123 HDI--IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 180
HD+ +RR I + G + P F P+ ++ L + K+PTPIQ QG P ALS
Sbjct: 59 HDVEELRRKKEITIRGVNCPKPIYGFHQANFPQYVLDVLIDQRFKEPTPIQCQGFPLALS 118
Query: 181 GRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHDI 239
GRD++GIA TGSGKTL +LP ++ Q P+L G+GP L++ P+RELA+Q +
Sbjct: 119 GRDMVGIAQTGSGKTLAHLLPAMVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQV 174
Query: 240 IQYYCAALPIGS 251
Y + + S
Sbjct: 175 ADDYGKSSRLKS 186
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 6 NSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP-GEGPYGLIICPSRELARQTHD 64
+ RD++GIA TGSGKTL +LP ++ Q P+L G+GP L++ P+RELA+Q
Sbjct: 118 SGRDMVGIAQTGSGKTLAHLLPAMVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQ 173
Query: 65 IIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ Y + L++ GG P + +++G++
Sbjct: 174 VADDYGKS--SRLKSTCIYGGAPKGPQIRYLERGVE 207
>gi|336271291|ref|XP_003350404.1| hypothetical protein SMAC_02116 [Sordaria macrospora k-hell]
Length = 602
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 124 DIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRD 183
D R + I + G+DVP +F P ++ ++A+G PT IQ QG P ALSGRD
Sbjct: 151 DKFRADHSIAIFGNDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRD 210
Query: 184 IIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDIIQY 242
++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 211 VVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEISK 266
Query: 243 YCAALPI 249
+ + I
Sbjct: 267 FGKSSRI 273
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 8 RDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFL-PGEGPYGLIICPSRELARQTHDII 66
RD++GIA TGSGKTL + LP ++ Q P L PG+GP LI+ P+RELA Q I
Sbjct: 209 RDVVGIAETGSGKTLTYCLPAIVHINAQ----PLLAPGDGPIVLILAPTRELAVQIQQEI 264
Query: 67 QYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
+ + I R GGVP + + +G++
Sbjct: 265 SKFGKSSRI--RNTCVYGGVPKGPQIRDLSRGVE 296
>gi|194758757|ref|XP_001961625.1| GF15062 [Drosophila ananassae]
gi|190615322|gb|EDV30846.1| GF15062 [Drosophila ananassae]
Length = 819
Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 125 IIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSGRDI 184
I R + I ++G +P S+ P ++ ++ G K+PTPIQ Q IP L RDI
Sbjct: 372 IFREDYNITIKGGKIPNPIRSWSESGFPREIIDIIDKVGYKEPTPIQRQAIPIGLQNRDI 431
Query: 185 IGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP--GEGPYGLIICPSRELARQTHD 238
IG+A TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q +
Sbjct: 432 IGVAETGSGKTLAFLIPLLSW-IQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 486
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 5/82 (6%)
Query: 7 SRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLP--GEGPYGLIICPSRELARQTHD 64
+RDIIG+A TGSGKTL F++P+L + ++ K+ L +GPY +I+ P+RELA+Q +
Sbjct: 428 NRDIIGVAETGSGKTLAFLIPLLSW-IQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 486
Query: 65 IIQYYCAALPIPLRTCLAIGGV 86
+ P+ +RT + +GG+
Sbjct: 487 ETTKF--GQPLGIRTVVVVGGL 506
>gi|255543463|ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 514
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 117 SLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP 176
SL + +++RR L I V+G+ VP SF LP+ L+ LEA G PTP+Q+Q IP
Sbjct: 93 SLTNDQTELLRRTLEIHVKGELVPDPILSFSSCNLPQKLLLNLEAAGYDLPTPVQMQAIP 152
Query: 177 AALSGRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 236
ALSG+ ++ A TGSGKT +++PI+ C +L P +++ P+REL Q
Sbjct: 153 TALSGKSLLASADTGSGKTASYLVPIISSC--ASYRLQHSSDRKPLAMVLTPTRELCIQV 210
Query: 237 HDIIQYYCAALP 248
D + + LP
Sbjct: 211 EDQAKLFGKGLP 222
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 3 TYRNSRDIIGIAFTGSGKTLVFVLPILMFCLEQETKLPFLPGEGPYGLIICPSRELARQT 62
T + + ++ A TGSGKT +++PI+ C +L P +++ P+REL Q
Sbjct: 153 TALSGKSLLASADTGSGKTASYLVPIISSC--ASYRLQHSSDRKPLAMVLTPTRELCIQV 210
Query: 63 HDIIQYYCAALPIPLRTCLAIGGVPMNQSLDVIKKGIQ 100
D + + L P +T L +GG M L I++G++
Sbjct: 211 EDQAKLFGKGL--PFKTALVVGGDAMAGQLYRIQQGVE 246
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.145 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,238,927,490
Number of Sequences: 23463169
Number of extensions: 185851004
Number of successful extensions: 573512
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 22148
Number of HSP's successfully gapped in prelim test: 2992
Number of HSP's that attempted gapping in prelim test: 484077
Number of HSP's gapped (non-prelim): 54264
length of query: 252
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 113
effective length of database: 9,097,814,876
effective search space: 1028053080988
effective search space used: 1028053080988
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)