Your job contains 1 sequence.
>psy7787
MELFHPTIFHISAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPG
VSDAYYCKECTIQEKDVSTVEPQFYELIGTKGLCLSTLVMAPWVATPEAECPQNSKLIAG
KKKSCGELDPGPPEWRNALSGFEKQMFEIEQHRLIVGLVDEGGGQACLPTAPRTTDPGNR
TIRTMMTMLLQFWLGLKVMDVTLLTALKKRFSLLQALQQVDNLSLLLHVFHFLNHIHTRH
YSVIDSFFKAQQEDEIFGSSKTKAIKYSSSITSVHIFRLHPVKNGQTSSGFDLLSKTSRR
SCPLSLGKILKLRLEPHSHSLGLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSY
QGRCVICGGPGVSDAYYCKECTIQEKDVSTVEPQFYELIGTKGCSIVFQKNTYWDIFVNT
LSTLSIATCLNGFGTCAEFMSVEYCYQRNWHKQAVTSVIIGLG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7787
(463 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BV20 - symbol:PHF5A "Uncharacterized protein"... 382 2.4e-35 1
UNIPROTKB|A4FV59 - symbol:PHF5A "PHF5A protein" species:9... 382 2.4e-35 1
UNIPROTKB|Q7RTV0 - symbol:PHF5A "PHD finger-like domain-c... 382 2.4e-35 1
MGI|MGI:2156864 - symbol:Phf5a "PHD finger protein 5A" sp... 382 2.4e-35 1
RGD|621555 - symbol:Phf5a "PHD finger protein 5A" species... 382 2.4e-35 1
FB|FBgn0031822 - symbol:CG9548 species:7227 "Drosophila m... 365 1.5e-33 1
TAIR|locus:2007432 - symbol:AT1G07170 "AT1G07170" species... 361 4.1e-33 1
TAIR|locus:2045698 - symbol:AT2G30000 species:3702 "Arabi... 361 4.1e-33 1
WB|WBGene00004016 - symbol:phf-5 species:6239 "Caenorhabd... 351 4.7e-32 1
DICTYBASE|DDB_G0284403 - symbol:phf5a "PHD finger-like do... 327 1.6e-29 1
UNIPROTKB|G4N4T9 - symbol:MGG_05173 "Uncharacterized prot... 311 1.0e-27 1
ASPGD|ASPL0000063831 - symbol:AN7290 species:162425 "Emer... 310 1.3e-27 1
POMBASE|SPAC23H3.02c - symbol:ini1 "RING finger-like prot... 284 1.4e-24 1
SGD|S000006298 - symbol:RDS3 "Component of the SF3b subco... 211 1.7e-16 1
CGD|CAL0006234 - symbol:orf19.2230 species:5476 "Candida ... 189 4.3e-14 1
UNIPROTKB|Q59Z68 - symbol:CaO19.2230 "Putative uncharacte... 189 4.3e-14 1
>UNIPROTKB|E1BV20 [details] [associations]
symbol:PHF5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005686 "U2 snRNP" evidence=IEA] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
GO:GO:0016607 GO:GO:0016363 GO:GO:0000398 GO:GO:0005686
GO:GO:0005689 KO:K12834 OMA:ECTRLEK InterPro:IPR005345
PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468 CTD:84844
GeneTree:ENSGT00390000018518 EMBL:AADN02006069 IPI:IPI00596016
RefSeq:XP_416230.1 UniGene:Gga.16660 ProteinModelPortal:E1BV20
SMR:E1BV20 PRIDE:E1BV20 Ensembl:ENSGALT00000019497 GeneID:417991
KEGG:gga:417991 NextBio:20821214 Uniprot:E1BV20
Length = 110
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 68/92 (73%), Positives = 75/92 (81%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC
Sbjct: 16 GVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
TIQEKD P+ L G+ + +++ Y
Sbjct: 76 TIQEKDRDGC-PKIVNL-GSSKTDLFYERKKY 105
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 64/64 (100%), Positives = 64/64 (100%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI
Sbjct: 18 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 77
Query: 73 QEKD 76
QEKD
Sbjct: 78 QEKD 81
>UNIPROTKB|A4FV59 [details] [associations]
symbol:PHF5A "PHF5A protein" species:9913 "Bos taurus"
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016363 "nuclear
matrix" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005686 "U2 snRNP" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] GO:GO:0016607
GO:GO:0016363 GO:GO:0000398 GO:GO:0005686 GO:GO:0005689
eggNOG:NOG274521 HOGENOM:HOG000168285 KO:K12834 OMA:ECTRLEK
InterPro:IPR005345 PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468
CTD:84844 HOVERGEN:HBG053587 OrthoDB:EOG4RBQM0
GeneTree:ENSGT00390000018518 EMBL:DAAA02014732 EMBL:BC123773
IPI:IPI00706557 RefSeq:NP_001076851.1 UniGene:Bt.22471 SMR:A4FV59
STRING:A4FV59 Ensembl:ENSBTAT00000008423 GeneID:507180
KEGG:bta:507180 InParanoid:A4FV59 NextBio:20867940 Uniprot:A4FV59
Length = 110
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 68/92 (73%), Positives = 75/92 (81%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC
Sbjct: 16 GVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
TIQEKD P+ L G+ + +++ Y
Sbjct: 76 TIQEKDRDGC-PKIVNL-GSSKTDLFYERKKY 105
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 64/64 (100%), Positives = 64/64 (100%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI
Sbjct: 18 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 77
Query: 73 QEKD 76
QEKD
Sbjct: 78 QEKD 81
>UNIPROTKB|Q7RTV0 [details] [associations]
symbol:PHF5A "PHD finger-like domain-containing protein 5A"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005686 "U2 snRNP" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IDA;TAS]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0016607 "nuclear speck" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71 GO:GO:0045893
GO:GO:0003677 GO:GO:0016607 Reactome:REACT_1675 GO:GO:0003700
GO:GO:0006351 EMBL:AL008582 GO:GO:0016363 GO:GO:0000398
GO:GO:0005686 GO:GO:0005689 eggNOG:NOG274521 HOGENOM:HOG000168285
KO:K12834 OMA:ECTRLEK InterPro:IPR005345 PANTHER:PTHR13120
Pfam:PF03660 PIRSF:PIRSF016468 EMBL:CR456398 EMBL:BC007321
EMBL:BC075808 EMBL:BK000563 IPI:IPI00005511 RefSeq:NP_116147.1
UniGene:Hs.474980 UniGene:Hs.707800 ProteinModelPortal:Q7RTV0
SMR:Q7RTV0 IntAct:Q7RTV0 MINT:MINT-3033866 STRING:Q7RTV0
PhosphoSite:Q7RTV0 DMDM:46577625 PaxDb:Q7RTV0 PeptideAtlas:Q7RTV0
PRIDE:Q7RTV0 DNASU:84844 Ensembl:ENST00000216252 GeneID:84844
KEGG:hsa:84844 UCSC:uc003bab.3 CTD:84844 GeneCards:GC22M041855
HGNC:HGNC:18000 HPA:HPA028885 neXtProt:NX_Q7RTV0
PharmGKB:PA134876104 HOVERGEN:HBG053587 InParanoid:Q7RTV0
OrthoDB:EOG4RBQM0 PhylomeDB:Q7RTV0 ChiTaRS:PHF5A GenomeRNAi:84844
NextBio:75083 Bgee:Q7RTV0 CleanEx:HS_PHF5A Genevestigator:Q7RTV0
GermOnline:ENSG00000100410 Uniprot:Q7RTV0
Length = 110
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 68/92 (73%), Positives = 75/92 (81%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC
Sbjct: 16 GVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
TIQEKD P+ L G+ + +++ Y
Sbjct: 76 TIQEKDRDGC-PKIVNL-GSSKTDLFYERKKY 105
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 64/64 (100%), Positives = 64/64 (100%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI
Sbjct: 18 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 77
Query: 73 QEKD 76
QEKD
Sbjct: 78 QEKD 81
>MGI|MGI:2156864 [details] [associations]
symbol:Phf5a "PHD finger protein 5A" species:10090 "Mus
musculus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005686 "U2 snRNP" evidence=ISO]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IDA] [GO:0016607 "nuclear
speck" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] MGI:MGI:2156864
GO:GO:0045893 GO:GO:0003677 GO:GO:0016607 GO:GO:0003700
GO:GO:0006351 GO:GO:0016363 GO:GO:0000398 GO:GO:0005686
GO:GO:0005689 eggNOG:NOG274521 HOGENOM:HOG000168285 KO:K12834
OMA:ECTRLEK InterPro:IPR005345 PANTHER:PTHR13120 Pfam:PF03660
PIRSF:PIRSF016468 CTD:84844 HOVERGEN:HBG053587 OrthoDB:EOG4RBQM0
ChiTaRS:PHF5A EMBL:AF479286 EMBL:AF479288 EMBL:AK003520
EMBL:AK143590 EMBL:AK163247 EMBL:AK167932 EMBL:AK167955
EMBL:BC025161 IPI:IPI00133491 PIR:JC7851 RefSeq:NP_081013.1
UniGene:Mm.271715 ProteinModelPortal:P83870 SMR:P83870
STRING:P83870 PhosphoSite:P83870 PaxDb:P83870 PRIDE:P83870
Ensembl:ENSMUST00000023117 GeneID:68479 KEGG:mmu:68479
UCSC:uc007wxo.1 GeneTree:ENSGT00390000018518 InParanoid:P83870
NextBio:327254 Bgee:P83870 CleanEx:MM_PHF5A Genevestigator:P83870
GermOnline:ENSMUSG00000061360 Uniprot:P83870
Length = 110
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 68/92 (73%), Positives = 75/92 (81%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC
Sbjct: 16 GVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
TIQEKD P+ L G+ + +++ Y
Sbjct: 76 TIQEKDRDGC-PKIVNL-GSSKTDLFYERKKY 105
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 64/64 (100%), Positives = 64/64 (100%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI
Sbjct: 18 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 77
Query: 73 QEKD 76
QEKD
Sbjct: 78 QEKD 81
>RGD|621555 [details] [associations]
symbol:Phf5a "PHD finger protein 5A" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005686 "U2 snRNP" evidence=ISO;ISS]
[GO:0005689 "U12-type spliceosomal complex" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA;ISO] [GO:0016607 "nuclear
speck" evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] RGD:621555 GO:GO:0045893 GO:GO:0003677 GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0016363 GO:GO:0000398
GO:GO:0005686 GO:GO:0005689 eggNOG:NOG274521 HOGENOM:HOG000168285
KO:K12834 OMA:ECTRLEK InterPro:IPR005345 PANTHER:PTHR13120
Pfam:PF03660 PIRSF:PIRSF016468 CTD:84844 HOVERGEN:HBG053587
OrthoDB:EOG4RBQM0 GeneTree:ENSGT00390000018518 EMBL:AF495522
IPI:IPI00411215 RefSeq:NP_620243.1 UniGene:Rn.9116
ProteinModelPortal:P83871 SMR:P83871 STRING:P83871
PhosphoSite:P83871 PRIDE:P83871 Ensembl:ENSRNOT00000005837
GeneID:192246 KEGG:rno:192246 UCSC:RGD:621555 InParanoid:P83871
NextBio:622878 ArrayExpress:P83871 Genevestigator:P83871
GermOnline:ENSRNOG00000024170 Uniprot:P83871
Length = 110
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 68/92 (73%), Positives = 75/92 (81%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC
Sbjct: 16 GVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
TIQEKD P+ L G+ + +++ Y
Sbjct: 76 TIQEKDRDGC-PKIVNL-GSSKTDLFYERKKY 105
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 64/64 (100%), Positives = 64/64 (100%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI
Sbjct: 18 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 77
Query: 73 QEKD 76
QEKD
Sbjct: 78 QEKD 81
>FB|FBgn0031822 [details] [associations]
symbol:CG9548 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] EMBL:AE014134
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 eggNOG:NOG274521
KO:K12834 OMA:ECTRLEK InterPro:IPR005345 PANTHER:PTHR13120
Pfam:PF03660 PIRSF:PIRSF016468 GeneTree:ENSGT00390000018518
EMBL:AY128489 EMBL:BT044121 RefSeq:NP_609038.1 UniGene:Dm.30811
ProteinModelPortal:Q9VMC8 SMR:Q9VMC8 STRING:Q9VMC8 PaxDb:Q9VMC8
EnsemblMetazoa:FBtr0079264 GeneID:33909 KEGG:dme:Dmel_CG9548
UCSC:CG9548-RA FlyBase:FBgn0031822 InParanoid:Q9VMC8
OrthoDB:EOG40K6G9 PhylomeDB:Q9VMC8 GenomeRNAi:33909 NextBio:785876
Bgee:Q9VMC8 GermOnline:CG9548 Uniprot:Q9VMC8
Length = 111
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 66/92 (71%), Positives = 73/92 (79%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEK DGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCK C
Sbjct: 16 GVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKSC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
TIQEKD P+ L G+ + +++ Y
Sbjct: 76 TIQEKDRDGC-PKIVNL-GSSKTDLFYERKKY 105
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEK DGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCK CTI
Sbjct: 18 AIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKSCTI 77
Query: 73 QEKD 76
QEKD
Sbjct: 78 QEKD 81
>TAIR|locus:2007432 [details] [associations]
symbol:AT1G07170 "AT1G07170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005689 "U12-type spliceosomal
complex" evidence=ISS] EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC004680 eggNOG:NOG274521 KO:K12834 InterPro:IPR005345
PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468 EMBL:AK118482
EMBL:BT004694 EMBL:AY087478 IPI:IPI00530588 PIR:T02485
RefSeq:NP_001077473.1 RefSeq:NP_001184928.1 RefSeq:NP_563782.1
RefSeq:NP_565691.1 UniGene:At.12753 UniGene:At.42310
ProteinModelPortal:P0DI19 SMR:P0DI19 PRIDE:P0DI19 GeneID:817551
GeneID:837228 KEGG:ath:AT1G07170 KEGG:ath:AT2G30000 TAIR:At2g30000
PhylomeDB:P0DI19 Uniprot:P0DI19
Length = 110
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 64/92 (69%), Positives = 73/92 (79%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGS+QGRCVICGG G+SDAYYCKEC
Sbjct: 16 GIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
T QEKD P+ L G+ + +++ Y
Sbjct: 76 TQQEKDRDGC-PKIVNL-GSAKTDLFYERKKY 105
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 60/64 (93%), Positives = 62/64 (96%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGS+QGRCVICGG G+SDAYYCKECT
Sbjct: 18 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQ 77
Query: 73 QEKD 76
QEKD
Sbjct: 78 QEKD 81
>TAIR|locus:2045698 [details] [associations]
symbol:AT2G30000 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004680 eggNOG:NOG274521 KO:K12834
InterPro:IPR005345 PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468
EMBL:AK118482 EMBL:BT004694 EMBL:AY087478 IPI:IPI00530588
PIR:T02485 RefSeq:NP_001077473.1 RefSeq:NP_001184928.1
RefSeq:NP_563782.1 RefSeq:NP_565691.1 UniGene:At.12753
UniGene:At.42310 ProteinModelPortal:P0DI19 SMR:P0DI19 PRIDE:P0DI19
GeneID:817551 GeneID:837228 KEGG:ath:AT1G07170 KEGG:ath:AT2G30000
TAIR:At2g30000 PhylomeDB:P0DI19 Uniprot:P0DI19
Length = 110
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 64/92 (69%), Positives = 73/92 (79%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGS+QGRCVICGG G+SDAYYCKEC
Sbjct: 16 GIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
T QEKD P+ L G+ + +++ Y
Sbjct: 76 TQQEKDRDGC-PKIVNL-GSAKTDLFYERKKY 105
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 60/64 (93%), Positives = 62/64 (96%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGS+QGRCVICGG G+SDAYYCKECT
Sbjct: 18 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQ 77
Query: 73 QEKD 76
QEKD
Sbjct: 78 QEKD 81
>WB|WBGene00004016 [details] [associations]
symbol:phf-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] GO:GO:0005634 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 KO:K12834 OMA:ECTRLEK InterPro:IPR005345
PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468
GeneTree:ENSGT00390000018518 EMBL:AF537096 EMBL:AF537097
EMBL:FO081808 RefSeq:NP_001022909.1 RefSeq:NP_497539.3
UniGene:Cel.25489 UniGene:Cel.9696 ProteinModelPortal:G5EBY6
SMR:G5EBY6 EnsemblMetazoa:Y54F10BM.14 GeneID:190269 GeneID:3564851
KEGG:cel:CELE_Y54F10BM.1 KEGG:cel:CELE_Y54F10BM.14 CTD:190269
CTD:3564851 WormBase:Y54F10BM.14 NextBio:954223 Uniprot:G5EBY6
Length = 110
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 59/66 (89%), Positives = 63/66 (95%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLCEKCDG+CVICDS+VRPCTLVRIC+ECNYGSYQGRCVICGG GVSDAYYCKEC
Sbjct: 16 GIAIGRLCEKCDGRCVICDSHVRPCTLVRICEECNYGSYQGRCVICGGAGVSDAYYCKEC 75
Query: 382 TIQEKD 387
TI EKD
Sbjct: 76 TILEKD 81
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 59/64 (92%), Positives = 62/64 (96%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLCEKCDG+CVICDS+VRPCTLVRIC+ECNYGSYQGRCVICGG GVSDAYYCKECTI
Sbjct: 18 AIGRLCEKCDGRCVICDSHVRPCTLVRICEECNYGSYQGRCVICGGAGVSDAYYCKECTI 77
Query: 73 QEKD 76
EKD
Sbjct: 78 LEKD 81
>DICTYBASE|DDB_G0284403 [details] [associations]
symbol:phf5a "PHD finger-like domain-containing
protein 5A" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005686 "U2 snRNP"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] dictyBase:DDB_G0284403 GenomeReviews:CM000153_GR
GO:GO:0000398 EMBL:AAFI02000064 GO:GO:0005686 eggNOG:NOG274521
KO:K12834 OMA:ECTRLEK InterPro:IPR005345 PANTHER:PTHR13120
Pfam:PF03660 PIRSF:PIRSF016468 RefSeq:XP_638610.1 STRING:Q54PP4
EnsemblProtists:DDB0233777 GeneID:8624581 KEGG:ddi:DDB_G0284403
InParanoid:Q54PP4 ProtClustDB:CLSZ2430271 Uniprot:Q54PP4
Length = 110
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 58/92 (63%), Positives = 71/92 (77%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGR+C+KCDGKCVICDSYVRP TLVRICDECNYGS+QG+CVICGG GVSDAYYC C
Sbjct: 16 GIAIGRVCDKCDGKCVICDSYVRPTTLVRICDECNYGSFQGKCVICGGQGVSDAYYCFAC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
+ +EKD P+ L G+K + +++ Y
Sbjct: 76 SREEKDRDGC-PKIVNLGGSK-IDLFYERKKY 105
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 57/79 (72%), Positives = 65/79 (82%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGR+C+KCDGKCVICDSYVRP TLVRICDECNYGS+QG+CVICGG GVSDAYYC C+
Sbjct: 18 AIGRVCDKCDGKCVICDSYVRPTTLVRICDECNYGSFQGKCVICGGQGVSDAYYCFACSR 77
Query: 73 QEKDVSTVEPQFYELIGTK 91
+EKD P+ L G+K
Sbjct: 78 EEKDRDGC-PKIVNLGGSK 95
>UNIPROTKB|G4N4T9 [details] [associations]
symbol:MGG_05173 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] EMBL:CM001233 KO:K12834 InterPro:IPR005345
PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468
RefSeq:XP_003712711.1 EnsemblFungi:MGG_05173T0 GeneID:2675350
KEGG:mgr:MGG_05173 Uniprot:G4N4T9
Length = 110
Score = 311 (114.5 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 54/91 (59%), Positives = 68/91 (74%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+ IGRLC+KCDGKC +CDSYVRP TLVRICDEC++G+YQ +CV+CGG G+SDA+YC EC
Sbjct: 16 GIAIGRLCDKCDGKCPVCDSYVRPTTLVRICDECSFGNYQNKCVVCGGEGISDAFYCFEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNT 412
T EKD P+ L G+ + +QK T
Sbjct: 76 TRLEKDRDGC-PKIINL-GSSRTDLFYQKKT 104
Score = 297 (109.6 bits), Expect = 4.5e-26, P = 4.5e-26
Identities = 48/64 (75%), Positives = 57/64 (89%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
AIGRLC+KCDGKC +CDSYVRP TLVRICDEC++G+YQ +CV+CGG G+SDA+YC ECT
Sbjct: 18 AIGRLCDKCDGKCPVCDSYVRPTTLVRICDECSFGNYQNKCVVCGGEGISDAFYCFECTR 77
Query: 73 QEKD 76
EKD
Sbjct: 78 LEKD 81
>ASPGD|ASPL0000063831 [details] [associations]
symbol:AN7290 species:162425 "Emericella nidulans"
[GO:0009410 "response to xenobiotic stimulus" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IEA]
[GO:0005686 "U2 snRNP" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
EMBL:BN001304 EMBL:AACD01000127 eggNOG:NOG274521
HOGENOM:HOG000168285 KO:K12834 OMA:ECTRLEK OrthoDB:EOG46DQCC
InterPro:IPR005345 PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468
RefSeq:XP_680559.1 STRING:Q5AWP0 EnsemblFungi:CADANIAT00000148
GeneID:2869765 KEGG:ani:AN7290.2 Uniprot:Q5AWP0
Length = 108
Score = 310 (114.2 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 52/92 (56%), Positives = 70/92 (76%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G++IGRLC+KCDGKC +CDSYVRP TLVRICDEC++G+YQ +C++CGG G+SDA+YC EC
Sbjct: 16 GISIGRLCDKCDGKCPVCDSYVRPTTLVRICDECSFGNYQNKCIVCGGEGISDAFYCFEC 75
Query: 382 TIQEKDVSTVEPQFYELIGTKGCSIVFQKNTY 413
T EKD P+ L G+ + +QK ++
Sbjct: 76 TRLEKDRDGC-PKIINL-GSSRTDLFYQKKSF 105
Score = 293 (108.2 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 46/64 (71%), Positives = 57/64 (89%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTI 72
+IGRLC+KCDGKC +CDSYVRP TLVRICDEC++G+YQ +C++CGG G+SDA+YC ECT
Sbjct: 18 SIGRLCDKCDGKCPVCDSYVRPTTLVRICDECSFGNYQNKCIVCGGEGISDAFYCFECTR 77
Query: 73 QEKD 76
EKD
Sbjct: 78 LEKD 81
>POMBASE|SPAC23H3.02c [details] [associations]
symbol:ini1 "RING finger-like protein Ini1"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=IGI;IDA] PomBase:SPAC23H3.02c
GO:GO:0005829 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681
GO:GO:0045292 EMBL:AY279206 PIR:T38295 RefSeq:NP_593792.1
ProteinModelPortal:Q9UTB8 SMR:Q9UTB8 STRING:Q9UTB8
EnsemblFungi:SPAC23H3.02c.1 GeneID:2541843 KEGG:spo:SPAC23H3.02c
eggNOG:NOG274521 HOGENOM:HOG000168285 KO:K12834 OMA:ECTRLEK
OrthoDB:EOG46DQCC NextBio:20802931 InterPro:IPR005345
PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468 Uniprot:Q9UTB8
Length = 117
Score = 284 (105.0 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 47/66 (71%), Positives = 54/66 (81%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKEC 381
G+T+G+LCE+CD KC ICDS+VRP TLVRICDEC +GS Q RC+ICG PGVSD YYC EC
Sbjct: 16 GITVGKLCERCDEKCPICDSHVRPTTLVRICDECAFGSSQDRCIICGAPGVSDCYYCSEC 75
Query: 382 TIQEKD 387
T E D
Sbjct: 76 TRMEYD 81
Score = 271 (100.5 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 45/63 (71%), Positives = 51/63 (80%)
Query: 14 IGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQ 73
+G+LCE+CD KC ICDS+VRP TLVRICDEC +GS Q RC+ICG PGVSD YYC ECT
Sbjct: 19 VGKLCERCDEKCPICDSHVRPTTLVRICDECAFGSSQDRCIICGAPGVSDCYYCSECTRM 78
Query: 74 EKD 76
E D
Sbjct: 79 EYD 81
>SGD|S000006298 [details] [associations]
symbol:RDS3 "Component of the SF3b subcomplex of the U2
snRNP" species:4932 "Saccharomyces cerevisiae" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005686 "U2
snRNP" evidence=IDA] [GO:0000245 "spliceosomal complex assembly"
evidence=IDA;IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI;IMP;IPI] [GO:0009410 "response to xenobiotic stimulus"
evidence=IMP] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] SGD:S000006298
GO:GO:0005681 EMBL:BK006949 GO:GO:0009410 EMBL:U51033 GO:GO:0000245
GO:GO:0005686 eggNOG:NOG274521 HOGENOM:HOG000168285 KO:K12834
OMA:ECTRLEK OrthoDB:EOG46DQCC InterPro:IPR005345 PANTHER:PTHR13120
Pfam:PF03660 PIRSF:PIRSF016468 GeneTree:ENSGT00390000018518
EMBL:AY693180 PIR:S69077 RefSeq:NP_015419.1 PDB:2K0A PDBsum:2K0A
ProteinModelPortal:Q06835 SMR:Q06835 DIP:DIP-3822N IntAct:Q06835
MINT:MINT-519498 STRING:Q06835 PeptideAtlas:Q06835
EnsemblFungi:YPR094W GeneID:856209 KEGG:sce:YPR094W CYGD:YPR094w
EvolutionaryTrace:Q06835 NextBio:981417 Genevestigator:Q06835
GermOnline:YPR094W Uniprot:Q06835
Length = 107
Score = 211 (79.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 37/67 (55%), Positives = 45/67 (67%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICG-GPGVSDAYYCKE 380
G+ G LCEKCDGKC ICDSYVRP VR+C+ C++G C+IC GV+DA+YC E
Sbjct: 16 GVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVNDAFYCWE 75
Query: 381 CTIQEKD 387
C KD
Sbjct: 76 CCRLGKD 82
Score = 206 (77.6 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 15 GRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICG-GPGVSDAYYCKECTIQ 73
G LCEKCDGKC ICDSYVRP VR+C+ C++G C+IC GV+DA+YC EC
Sbjct: 20 GLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVNDAFYCWECCRL 79
Query: 74 EKD 76
KD
Sbjct: 80 GKD 82
>CGD|CAL0006234 [details] [associations]
symbol:orf19.2230 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005686 "U2 snRNP"
evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] CGD:CAL0006234 EMBL:AACQ01000095 EMBL:AACQ01000096
eggNOG:NOG274521 HOGENOM:HOG000168285 KO:K12834 InterPro:IPR005345
PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468 RefSeq:XP_714761.1
RefSeq:XP_714821.1 STRING:Q59Z68 GeneID:3643517 GeneID:3643539
KEGG:cal:CaO19.2230 KEGG:cal:CaO19.9772 Uniprot:Q59Z68
Length = 119
Score = 189 (71.6 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 41/96 (42%), Positives = 52/96 (54%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGP-------GVSD 374
G +IG LC CDGKC ICDS+V+P VRIC +C+ G +C++C GVS
Sbjct: 16 GKSIGLLCSNCDGKCPICDSFVKPTEQVRICQDCSQGHLSNKCILCANNLGENNENGVS- 74
Query: 375 AYYCKECTIQEKDVSTVEPQFYELIGTKGCSIVFQK 410
AYYC EC EK P+ + GTK I +K
Sbjct: 75 AYYCLECVRLEKHREGC-PRIINVGGTKTDMIYMKK 109
Score = 182 (69.1 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGP-------GVSDAY 65
+IG LC CDGKC ICDS+V+P VRIC +C+ G +C++C GVS AY
Sbjct: 18 SIGLLCSNCDGKCPICDSFVKPTEQVRICQDCSQGHLSNKCILCANNLGENNENGVS-AY 76
Query: 66 YCKECTIQEKDVSTVEPQFYELIGTK 91
YC EC EK P+ + GTK
Sbjct: 77 YCLECVRLEKHREGC-PRIINVGGTK 101
>UNIPROTKB|Q59Z68 [details] [associations]
symbol:CaO19.2230 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0006234 EMBL:AACQ01000095
EMBL:AACQ01000096 eggNOG:NOG274521 HOGENOM:HOG000168285 KO:K12834
InterPro:IPR005345 PANTHER:PTHR13120 Pfam:PF03660 PIRSF:PIRSF016468
RefSeq:XP_714761.1 RefSeq:XP_714821.1 STRING:Q59Z68 GeneID:3643517
GeneID:3643539 KEGG:cal:CaO19.2230 KEGG:cal:CaO19.9772
Uniprot:Q59Z68
Length = 119
Score = 189 (71.6 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 41/96 (42%), Positives = 52/96 (54%)
Query: 322 GLTIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGP-------GVSD 374
G +IG LC CDGKC ICDS+V+P VRIC +C+ G +C++C GVS
Sbjct: 16 GKSIGLLCSNCDGKCPICDSFVKPTEQVRICQDCSQGHLSNKCILCANNLGENNENGVS- 74
Query: 375 AYYCKECTIQEKDVSTVEPQFYELIGTKGCSIVFQK 410
AYYC EC EK P+ + GTK I +K
Sbjct: 75 AYYCLECVRLEKHREGC-PRIINVGGTKTDMIYMKK 109
Score = 182 (69.1 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 13 AIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGP-------GVSDAY 65
+IG LC CDGKC ICDS+V+P VRIC +C+ G +C++C GVS AY
Sbjct: 18 SIGLLCSNCDGKCPICDSFVKPTEQVRICQDCSQGHLSNKCILCANNLGENNENGVS-AY 76
Query: 66 YCKECTIQEKDVSTVEPQFYELIGTK 91
YC EC EK P+ + GTK
Sbjct: 77 YCLECVRLEKHREGC-PRIINVGGTK 101
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.445 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 463 463 0.00096 118 3 11 22 0.49 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 617 (66 KB)
Total size of DFA: 320 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.63u 0.11s 42.74t Elapsed: 00:00:02
Total cpu time: 42.63u 0.11s 42.74t Elapsed: 00:00:02
Start: Thu Aug 15 13:30:53 2013 End: Thu Aug 15 13:30:55 2013