Your job contains 1 sequence.
>psy7789
MGIPFISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCR
YLCLDEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVG
RAGAASMNVVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPF
FTLKSLKEDQNNQTLEN
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7789
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015331 - symbol:abs "abstrakt" species:7227 "Dros... 748 4.0e-74 1
UNIPROTKB|F1NAH6 - symbol:LOC100859810 "Uncharacterized p... 718 6.1e-71 1
UNIPROTKB|A3KN07 - symbol:DDX41 "Uncharacterized protein"... 703 2.4e-69 1
UNIPROTKB|E2R052 - symbol:DDX41 "Uncharacterized protein"... 703 2.4e-69 1
UNIPROTKB|J9NZF6 - symbol:DDX41 "Uncharacterized protein"... 703 2.4e-69 1
UNIPROTKB|J3KNN5 - symbol:DDX41 "Probable ATP-dependent R... 703 2.4e-69 1
UNIPROTKB|Q9UJV9 - symbol:DDX41 "Probable ATP-dependent R... 703 2.4e-69 1
MGI|MGI:1920185 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) bo... 703 2.4e-69 1
RGD|1311758 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box po... 703 2.4e-69 1
RGD|1559513 - symbol:RGD1559513 "similar to DEAD (Asp-Glu... 695 1.7e-68 1
ZFIN|ZDB-GENE-030131-1927 - symbol:ddx41 "DEAD (Asp-Glu-A... 672 4.5e-66 1
TAIR|locus:2176192 - symbol:AT5G51280 species:3702 "Arabi... 657 1.8e-64 1
TAIR|locus:2119176 - symbol:AT4G33370 species:3702 "Arabi... 632 7.9e-62 1
DICTYBASE|DDB_G0287361 - symbol:ddx41 "DEAD box protein a... 596 5.1e-58 1
WB|WBGene00019245 - symbol:sacy-1 species:6239 "Caenorhab... 592 1.4e-57 1
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 373 1.3e-33 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 368 4.2e-33 1
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 364 9.8e-33 1
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 364 9.8e-33 1
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 362 1.4e-32 1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 362 1.4e-32 1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 362 1.6e-32 1
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 362 1.6e-32 1
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 362 1.7e-32 1
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 362 1.7e-32 1
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 362 1.7e-32 1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 362 2.1e-32 1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 359 3.5e-32 1
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 359 3.5e-32 1
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 357 5.8e-32 1
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 355 9.3e-32 1
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 355 9.5e-32 1
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 347 6.8e-31 1
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 347 7.0e-31 1
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 337 6.3e-30 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 339 7.9e-30 1
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 331 4.1e-29 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 330 4.4e-29 1
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 328 8.8e-29 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 324 1.8e-28 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 323 2.7e-28 1
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 320 5.5e-28 1
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic... 315 2.6e-27 1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 312 3.7e-27 1
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 312 7.2e-27 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 306 9.3e-27 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 306 9.3e-27 1
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 193 9.7e-27 2
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 311 1.4e-26 1
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 311 1.8e-26 1
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 187 2.6e-26 2
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 187 2.6e-26 2
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 187 2.6e-26 2
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 187 2.6e-26 2
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd... 305 3.1e-26 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 300 5.0e-26 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 300 5.6e-26 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 294 5.0e-25 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 290 6.4e-25 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 294 9.1e-25 1
WB|WBGene00017162 - symbol:ddx-23 species:6239 "Caenorhab... 167 9.6e-25 2
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 292 1.1e-24 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 287 1.9e-24 1
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 291 2.0e-24 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 288 2.2e-24 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 283 4.8e-24 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 283 5.0e-24 1
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 278 5.4e-24 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 281 6.7e-24 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 277 1.2e-23 1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 284 1.3e-23 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 283 1.3e-23 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 278 1.3e-23 1
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 284 1.4e-23 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 278 1.6e-23 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 278 1.9e-23 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 280 1.9e-23 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 275 2.0e-23 1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 279 2.0e-23 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 275 3.0e-23 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 280 3.1e-23 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 280 3.1e-23 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 280 3.1e-23 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 280 3.1e-23 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 280 3.1e-23 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 280 3.1e-23 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 280 3.1e-23 1
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 277 3.4e-23 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 279 3.9e-23 1
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli... 273 4.3e-23 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 278 5.1e-23 1
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe... 272 5.1e-23 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 277 5.2e-23 1
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 272 5.5e-23 1
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas... 269 6.8e-23 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 272 8.1e-23 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 272 8.1e-23 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 272 8.1e-23 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 272 8.1e-23 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 272 8.1e-23 1
WARNING: Descriptions of 641 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 140/173 (80%), Positives = 164/173 (94%)
Query: 6 ISALPIP-LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCL 64
+ A +P +R+CLA+GG+P++++LDVI +G H++VATPGRLMDMLDKK+++LD+CRYLC+
Sbjct: 280 LQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCM 339
Query: 65 DEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGA 124
DEADRM+DMGFEEDVRTIFSFF+GQRQTLLFSATMPKKIQNFARSALVKP+TINVGRAGA
Sbjct: 340 DEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGA 399
Query: 125 ASMNVVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
ASMNV Q+VEYVKQEAK+VYLL+CLQKT PPVLIFAEKKQDVD IHEYLLLKG
Sbjct: 400 ASMNVTQQVEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKG 452
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 142/187 (75%), Positives = 161/187 (86%)
Query: 8 ALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEA 67
+LP PLR L IGG+ + + ++ IK G HMMVATPGRLMD+L KKMVSLD+CRYL LDEA
Sbjct: 284 SLP-PLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEA 342
Query: 68 DRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASM 127
DRM+DMGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKPITINVGRAGAAS+
Sbjct: 343 DRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASL 402
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK 187
+VVQEVEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K
Sbjct: 403 DVVQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK 462
Query: 188 EDQNNQT 194
DQ +T
Sbjct: 463 -DQEERT 468
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 136/182 (74%), Positives = 157/182 (86%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR L IGG+ + + ++ I+ G HMMVATPGRLMD+L KKMVSLD+CRYL LDEADRM+D
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAGAAS++V+QE
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQE 411
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
VEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K DQ
Sbjct: 412 VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK-DQEE 470
Query: 193 QT 194
+T
Sbjct: 471 RT 472
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 136/182 (74%), Positives = 157/182 (86%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR L IGG+ + + ++ I+ G HMMVATPGRLMD+L KKMVSLD+CRYL LDEADRM+D
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAGAAS++V+QE
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQE 411
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
VEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K DQ
Sbjct: 412 VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK-DQEE 470
Query: 193 QT 194
+T
Sbjct: 471 RT 472
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 136/182 (74%), Positives = 157/182 (86%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR L IGG+ + + ++ I+ G HMMVATPGRLMD+L KKMVSLD+CRYL LDEADRM+D
Sbjct: 319 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 378
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAGAAS++V+QE
Sbjct: 379 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQE 438
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
VEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K DQ
Sbjct: 439 VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK-DQEE 497
Query: 193 QT 194
+T
Sbjct: 498 RT 499
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 136/182 (74%), Positives = 157/182 (86%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR L IGG+ + + ++ I+ G HMMVATPGRLMD+L KKMVSLD+CRYL LDEADRM+D
Sbjct: 310 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 369
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAGAAS++V+QE
Sbjct: 370 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQE 429
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
VEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K DQ
Sbjct: 430 VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK-DQEE 488
Query: 193 QT 194
+T
Sbjct: 489 RT 490
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 136/182 (74%), Positives = 157/182 (86%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR L IGG+ + + ++ I+ G HMMVATPGRLMD+L KKMVSLD+CRYL LDEADRM+D
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAGAAS++V+QE
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQE 411
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
VEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K DQ
Sbjct: 412 VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK-DQEE 470
Query: 193 QT 194
+T
Sbjct: 471 RT 472
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 136/182 (74%), Positives = 157/182 (86%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR L IGG+ + + ++ I+ G HMMVATPGRLMD+L KKMVSLD+CRYL LDEADRM+D
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAGAAS++V+QE
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQE 411
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
VEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K DQ
Sbjct: 412 VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK-DQEE 470
Query: 193 QT 194
+T
Sbjct: 471 RT 472
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 136/182 (74%), Positives = 157/182 (86%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR L IGG+ + + ++ I+ G HMMVATPGRLMD+L KKMVSLD+CRYL LDEADRM+D
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAGAAS++V+QE
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQE 411
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
VEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K DQ
Sbjct: 412 VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK-DQEE 470
Query: 193 QT 194
+T
Sbjct: 471 RT 472
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 135/184 (73%), Positives = 158/184 (85%)
Query: 12 PLRTC-LAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
PL C L IGGV + + ++ ++ G H+MVATPGRLMD+L KKMVSLD+CRYL LDEADRM
Sbjct: 289 PLLHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADRM 348
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGFE D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAGAAS++V+
Sbjct: 349 IDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVI 408
Query: 131 QEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQ 190
QEVEYVK+EAK+VYLLECLQKT PPVLIFA+KK DVDAIHEYLLLKG + K DQ
Sbjct: 409 QEVEYVKEEAKMVYLLECLQKTPPPVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGK-DQ 467
Query: 191 NNQT 194
+T
Sbjct: 468 EERT 471
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 133/182 (73%), Positives = 156/182 (85%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R L IGG+ + + ++V+K +ATPGRLMD+L+KKMVSLD+CRYL LDEADRM+D
Sbjct: 149 MRCALCIGGMSVKEQMEVVK------LATPGRLMDLLNKKMVSLDICRYLALDEADRMID 202
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFEED+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKPITINVGRAGAAS++V+QE
Sbjct: 203 MGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQE 262
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
VEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKG + K DQ
Sbjct: 263 VEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK-DQEE 321
Query: 193 QT 194
+T
Sbjct: 322 RT 323
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 126/190 (66%), Positives = 152/190 (80%)
Query: 4 PFISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLC 63
P + A PLR+ L IGG+ M L+V+K+G H++VATPGRL DML KK +SLD CRYL
Sbjct: 248 PLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLT 307
Query: 64 LDEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG 123
LDEADR+VD+GFE+D+R +F F+ QRQTLLFSATMP KIQ FARSALVKP+T+NVGRAG
Sbjct: 308 LDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAG 367
Query: 124 AASMNVVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
AA+++V+QEVEYVKQEAKIVYLLECLQKT PPVLIF E K DVD IHEYLLLKG +
Sbjct: 368 AANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAI 427
Query: 184 KSLKEDQNNQ 193
K+ ++ +
Sbjct: 428 HGGKDQEDRE 437
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 123/179 (68%), Positives = 145/179 (81%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ L IGGV M LDV+KKG H++VATPGRL D+L KK +SLD CR L LDEADR+VD
Sbjct: 208 LRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVD 267
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GFE+D+R +F F+ QRQTLLFSATMP KIQ FA SALVKP+T+NVGRAGAA+++V+QE
Sbjct: 268 LGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQE 327
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQN 191
VEYVKQEAKIVYLLECLQKT PPVLIF E K DVD IHEYLLLKG + K+ ++
Sbjct: 328 VEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQED 386
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 111/164 (67%), Positives = 138/164 (84%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LRT LAIGG+ + + + KKG HM++ATPGRL+D+L+KK ++ +C+YL LDEADR++D
Sbjct: 334 LRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLID 393
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GFE+D+R++ F QRQTLLFSATMPKKIQ FARSALV P+ +NVGRAGAA++NV QE
Sbjct: 394 LGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQE 453
Query: 133 VEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLK 176
VE+VK EAKIVYLLECLQKT PPVLIF E K+DVD I+EYLLLK
Sbjct: 454 VEFVKPEAKIVYLLECLQKTPPPVLIFCENKKDVDDIYEYLLLK 497
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 116/187 (62%), Positives = 152/187 (81%)
Query: 7 SALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDE 66
+ LP +R L IGGVP+ + ++ G H++VATPGRL DML KK+++L+VCRYL LDE
Sbjct: 296 AGLP-EMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDE 354
Query: 67 ADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAAS 126
ADRM+DMGFE+++++IF FF+ QRQTLLFSATMP+KIQ FA+SALVKPI +NVGRAGAAS
Sbjct: 355 ADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAAS 414
Query: 127 MNVVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+NV+QE+E+V+ E K+V +LECLQKT P VLIFAEKK DVD I+EYLL+KG ++
Sbjct: 415 LNVLQELEFVRSENKLVRVLECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGG 474
Query: 187 KEDQNNQ 193
K DQ+++
Sbjct: 475 K-DQSDR 480
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 373 (136.4 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 77/190 (40%), Positives = 120/190 (63%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 343 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLD 402
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G RQT++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 403 MGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSEN 462
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ DA+ ++L +G + S+
Sbjct: 463 ITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREG---YACTSI 519
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 520 HGDRSQRDRE 529
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 368 (134.6 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 77/190 (40%), Positives = 118/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C YL LDEADRM+D
Sbjct: 327 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLD 386
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G RQT++FSAT PK+IQ AR L I + VGR G+ S N
Sbjct: 387 MGFEPQIRRIVEQDTMPPKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSEN 446
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ DA+ ++L +G + S+
Sbjct: 447 ITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREG---YACTSI 503
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 504 HGDRSQRDRE 513
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 364 (133.2 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 75/190 (39%), Positives = 120/190 (63%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 293 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 352
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 353 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 412
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + +L+F E K+ D++ ++L +G + S+
Sbjct: 413 ITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEG---YACTSI 469
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 470 HGDRSQRDRE 479
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 364 (133.2 bits), Expect = 9.8e-33, P = 9.8e-33
Identities = 75/190 (39%), Positives = 120/190 (63%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 294 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 353
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 354 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 413
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + +L+F E K+ D++ ++L +G + S+
Sbjct: 414 ITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEG---YACTSI 470
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 471 HGDRSQRDRE 480
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 362 (132.5 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 76/190 (40%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 272 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 331
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 332 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 391
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ DA+ ++L +G + S+
Sbjct: 392 ITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEG---YACTSI 448
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 449 HGDRSQRDRE 458
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 362 (132.5 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 76/190 (40%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 273 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 332
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 333 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 392
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ DA+ ++L +G + S+
Sbjct: 393 ITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEG---YACTSI 449
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 450 HGDRSQRDRE 459
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 362 (132.5 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 75/190 (39%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 294 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 353
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 354 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 413
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 414 ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 470
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 471 HGDRSQRDRE 480
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 362 (132.5 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 75/190 (39%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 355 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 414
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 415 ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 471
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 472 HGDRSQRDRE 481
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 362 (132.5 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 75/190 (39%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 355 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 414
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 415 ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 471
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 472 HGDRSQRDRE 481
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 362 (132.5 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 75/190 (39%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 295 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 355 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 414
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 415 ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 471
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 472 HGDRSQRDRE 481
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 362 (132.5 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 75/190 (39%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 296 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 355
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 356 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 415
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 416 ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 472
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 473 HGDRSQRDRE 482
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 362 (132.5 bits), Expect = 2.1e-32, P = 2.1e-32
Identities = 76/192 (39%), Positives = 119/192 (61%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 337 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 396
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 397 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 456
Query: 129 VVQEVEYVKQEAKIVYLLECLQKTEPP----VLIFAEKKQDVDAIHEYLLLKGKPFFTLK 184
+ Q+V +V++ K +LL+ L TE L+F E K+ D++ ++L +G +
Sbjct: 457 ITQKVVWVEESDKRSFLLDLLNATESGKDSLTLVFVETKKGADSLEDFLYHEG---YACT 513
Query: 185 SLKEDQNNQTLE 196
S+ D++ + E
Sbjct: 514 SIHGDRSQRDRE 525
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 359 (131.4 bits), Expect = 3.5e-32, P = 3.5e-32
Identities = 75/190 (39%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 295 VRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 355 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 414
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 415 ITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 471
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 472 HGDRSQRDRE 481
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 359 (131.4 bits), Expect = 3.5e-32, P = 3.5e-32
Identities = 75/190 (39%), Positives = 119/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 295 VRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 354
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 355 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 414
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 415 ITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 471
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 472 HGDRSQRDRE 481
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 357 (130.7 bits), Expect = 5.8e-32, P = 5.8e-32
Identities = 74/187 (39%), Positives = 117/187 (62%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGF 75
C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+DMGF
Sbjct: 298 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 357
Query: 76 EEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQ 131
E +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N+ Q
Sbjct: 358 EPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ 417
Query: 132 EVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+V +V++ K +LL+ L T + L+F E K+ D++ ++L +G + S+ D
Sbjct: 418 KVVWVEEADKRSFLLDLLNATGTDSLTLVFVETKKGADSLEDFLYHEG---YACTSIHGD 474
Query: 190 QNNQTLE 196
++ + E
Sbjct: 475 RSQRDRE 481
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 355 (130.0 bits), Expect = 9.3e-32, P = 9.3e-32
Identities = 75/190 (39%), Positives = 118/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 290 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 349
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 350 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 409
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V+ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 410 ITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 466
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 467 HGDRSQRDRE 476
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 355 (130.0 bits), Expect = 9.5e-32, P = 9.5e-32
Identities = 75/190 (39%), Positives = 118/190 (62%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 293 VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 352
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 353 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 412
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+ Q+V +V+ K +LL+ L T + L+F E K+ D++ ++L +G + S+
Sbjct: 413 ITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEG---YACTSI 469
Query: 187 KEDQNNQTLE 196
D++ + E
Sbjct: 470 HGDRSQRDRE 479
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 347 (127.2 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 71/167 (42%), Positives = 107/167 (64%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 288 VRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 347
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 348 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 407
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYL 173
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ +L
Sbjct: 408 ITQKVVWVEELDKRSFLLDLLNATGRDSLTLVFVETKKGADSLENFL 454
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 347 (127.2 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 71/167 (42%), Positives = 107/167 (64%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG Q + +++GCH++VATPGRL+DM+++ + LD C+YL LDEADRM+D
Sbjct: 294 VRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLD 353
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +G R T++FSAT PK+IQ AR L + I + VGR G+ S N
Sbjct: 354 MGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSEN 413
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYL 173
+ Q+V +V++ K +LL+ L T + L+F E K+ D++ +L
Sbjct: 414 ITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFL 460
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 337 (123.7 bits), Expect = 6.3e-30, P = 6.3e-30
Identities = 73/169 (43%), Positives = 107/169 (63%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++ C+ GG P+ L I++GC ++VATPGRL D+L++ +SL +YL LDEADRM+D
Sbjct: 254 VKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLD 313
Query: 73 MGFEEDVRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I G+RQTL+FSAT P IQ+ AR L I ++VGR G+ S N
Sbjct: 314 MGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSEN 373
Query: 129 VVQEVEYVKQEAKIVYLLECLQ-KTEPPVLIFAEKKQDVDAIHEYLLLK 176
+ Q+V YV+ + K LL+ L T+ LIF E K+ D + ++L+++
Sbjct: 374 ITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRMADQLTDFLIMQ 422
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 339 (124.4 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/188 (42%), Positives = 107/188 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR GG+ ++ +K GC ++VATPGRL+DML K +++ YL LDEADRM D
Sbjct: 330 LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD 389
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GFE VR+I R RQTLLFSATMP K++ AR L PI + VG G A+ ++ Q
Sbjct: 390 LGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQV 449
Query: 133 VEYVKQEA-KIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
V + +A K+ +LLE L E VL+FA KK VD I L L L K+
Sbjct: 450 VNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQ 509
Query: 190 QNN-QTLE 196
+ +TL+
Sbjct: 510 ASRMETLQ 517
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 331 (121.6 bits), Expect = 4.1e-29, P = 4.1e-29
Identities = 73/168 (43%), Positives = 103/168 (61%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + L I++GC ++VATPGRL+D++++ +SL +YL LDEADRM+D
Sbjct: 300 VRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLD 359
Query: 73 MGFEEDVRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I RQTL+FSAT P+ IQ AR L + ++VGR G+ S N
Sbjct: 360 MGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSEN 419
Query: 129 VVQEVEYVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLL 174
+ Q+VEYV+ K LL+ L T LIF E K+ DA+ E+L+
Sbjct: 420 ITQKVEYVEDHDKRSVLLDILHTHGTTGLTLIFVETKRMADALSEFLI 467
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 330 (121.2 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 77/196 (39%), Positives = 114/196 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++ +A GG P+NQ L +++G ++VATPGRL D+L++ VS+ + R+L LDEADRM+D
Sbjct: 266 VKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLD 325
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I RG RQTLLFSAT P++IQ A L I + VGR G+++
Sbjct: 326 MGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDL 385
Query: 129 VVQEVEYVKQEAKIVYLLECL--------QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPF 180
+VQ VE+V K +L++ L Q + L+F E K+ D++ +L + G
Sbjct: 386 IVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCING--- 442
Query: 181 FTLKSLKEDQNNQTLE 196
F S+ D+ Q E
Sbjct: 443 FPATSIHGDRTQQERE 458
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 328 (120.5 bits), Expect = 8.8e-29, P = 8.8e-29
Identities = 72/172 (41%), Positives = 104/172 (60%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG + Q + + +GC ++VATPGRL D+LD+ VSL RYL LDEADRM+D
Sbjct: 298 VRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLD 357
Query: 73 MGFEEDVRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I RQTL+FSAT P+ IQ AR L + ++VGR G+ S N
Sbjct: 358 MGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSEN 417
Query: 129 VVQEVEYVKQEAKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGKP 179
+ Q++ YV+ + K +L+ L E + ++F E K+ D + +YL +G P
Sbjct: 418 ITQKILYVEDDEKKSVILDLLSANENGLTIVFTETKRMADNLADYLYDQGFP 469
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 324 (119.1 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 73/194 (37%), Positives = 113/194 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++ +A GG P++Q L +++GC ++VATPGRL D+L++ VS+ + R+L LDEADRM+D
Sbjct: 258 VKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLD 317
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I RG RQT+LFSAT P +IQ A + I + VGR G+++
Sbjct: 318 MGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDL 377
Query: 129 VVQEVEYVKQEAKIVYLLECL------QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFT 182
+ Q VE+V++ K +L++ L Q + L+F E K+ D + +L + F
Sbjct: 378 ITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNE---FP 434
Query: 183 LKSLKEDQNNQTLE 196
S+ D+ Q E
Sbjct: 435 ATSIHGDRTQQERE 448
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 323 (118.8 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 73/193 (37%), Positives = 112/193 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++ +A GG P+NQ + +++G ++VATPGRL D+L++ VSL + R+L LDEADRM+D
Sbjct: 253 VKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLD 312
Query: 73 MGFEEDVRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I G RQT+LFSAT P++IQ A L I + VGR G+++
Sbjct: 313 MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDL 372
Query: 129 VVQEVEYVKQEAKIVYLLECL--------QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPF 180
+VQ VE+V K +L++ L Q + L+F E K+ D++ +L + G P
Sbjct: 373 IVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPA 432
Query: 181 FTLKSLKEDQNNQ 193
T+ + Q +
Sbjct: 433 TTIHGDRSQQERE 445
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 320 (117.7 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 73/174 (41%), Positives = 103/174 (59%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C GG + + I +GC ++ ATPGRL+D++D+ +SL ++L LDEADRM+D
Sbjct: 284 VRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLD 343
Query: 73 MGFEEDVRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I +RQTL+FSAT P+ IQ AR L + ++VGR G+ S N
Sbjct: 344 MGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSEN 403
Query: 129 VVQEVEYVKQEAKIVYLLECLQKTEPP---VLIFAEKKQDVDAIHEYLLLKGKP 179
+ Q+V +V+ K YLL+ L T PP LIF E K+ D + +YLL P
Sbjct: 404 ITQKVVHVEDSEKRSYLLDILH-TLPPEGLTLIFVETKRMADTLTDYLLNSNFP 456
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 315 (115.9 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 74/174 (42%), Positives = 104/174 (59%)
Query: 12 PLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMV 71
P+ + + GG + ++ + +GC ++VAT GRL+D+L + VSL +YL LDEADRM+
Sbjct: 358 PVSSVVIYGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRML 417
Query: 72 DMGFEEDVRTIFSFFR--G--QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASM 127
DMGFE +R I S F G RQTL+FSAT PK+IQN A L I + VG G +
Sbjct: 418 DMGFEPQIRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGT-TQ 476
Query: 128 NVVQEVEYVKQEAKIVYLLECLQ--KTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
N+ Q +EYV +E K YLL+ L K++ LIF E K+ D + +L + P
Sbjct: 477 NITQRIEYVVEEDKNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFP 530
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 312 (114.9 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 70/169 (41%), Positives = 100/169 (59%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R C+ GG P+ + + +GC ++VATPGRL D+L++ VSL +YL LDEADRM+D
Sbjct: 266 VRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLD 325
Query: 73 MGFEEDVRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I RQTL+FSAT P IQ+ AR L I ++VGR G+ S N
Sbjct: 326 MGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSEN 385
Query: 129 VVQEVEYVKQEAKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLK 176
+ Q + YV K LL+ L + LIF E K+ D + ++L+++
Sbjct: 386 ITQRILYVDDMDKKSALLDLLSAEHKGLTLIFVETKRMADQLTDFLIMQ 434
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 312 (114.9 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 72/173 (41%), Positives = 101/173 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG ++ + + +GCH++VATPGRL DM+ + V L+ R+L LDEADRM+D
Sbjct: 407 MRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLD 466
Query: 73 MGFEEDVRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
MGFE +R I GQRQTL+FSAT PK+IQ A L I + VGR G+ S N
Sbjct: 467 MGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSEN 526
Query: 129 VVQEVEYVKQEAKIVYLLECLQKT-EPP-------VLIFAEKKQDVDAIHEYL 173
+ Q + +V + K YLL+ L + P LIF E K+ D++ E+L
Sbjct: 527 ITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFL 579
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 306 (112.8 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 70/188 (37%), Positives = 110/188 (58%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC A GGVP + + +K+G H+++A PGRL+D+L++ + +L YL LDEAD+M+DMG
Sbjct: 218 TC-AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMG 276
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVK-PITINVGRAG-AASMNVVQE 132
FE +R I R RQTL++SAT PK++Q A+ + PI +NVG A ++ QE
Sbjct: 277 FELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQE 336
Query: 133 VEYVKQEAKIVYLLECLQ---KTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ +++ KI L LQ K +++F E K++ D I + L L G P + K+
Sbjct: 337 IYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQ 396
Query: 190 QNNQTLEN 197
+ + + N
Sbjct: 397 EERRWVLN 404
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 306 (112.8 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 70/188 (37%), Positives = 110/188 (58%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC A GGVP + + +K+G H+++A PGRL+D+L++ + +L YL LDEAD+M+DMG
Sbjct: 218 TC-AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMG 276
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVK-PITINVGRAG-AASMNVVQE 132
FE +R I R RQTL++SAT PK++Q A+ + PI +NVG A ++ QE
Sbjct: 277 FELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQE 336
Query: 133 VEYVKQEAKIVYLLECLQ---KTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ +++ KI L LQ K +++F E K++ D I + L L G P + K+
Sbjct: 337 IYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQ 396
Query: 190 QNNQTLEN 197
+ + + N
Sbjct: 397 EERRWVLN 404
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 193 (73.0 bits), Expect = 9.7e-27, Sum P(2) = 9.7e-27
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 10 PIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADR 69
P+ +RT + +GG+ + ++ GC +++ATPGRL+D+L+ + + L+ C Y+ LDEADR
Sbjct: 497 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADR 556
Query: 70 MVDMGFEEDVRTIFSF 85
M+DMGFE DV+ I +
Sbjct: 557 MIDMGFEPDVQKILEY 572
Score = 146 (56.5 bits), Expect = 9.7e-27, Sum P(2) = 9.7e-27
Identities = 38/124 (30%), Positives = 67/124 (54%)
Query: 76 EEDVRTIFSFF--RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEV 133
E++ + + +F+ + RQT++F+ATMP ++ AR+ L +P T+ +G G + Q V
Sbjct: 586 EDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIV 645
Query: 134 EYVKQEAKIVYLLECL-QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK-EDQN 191
+ + K L+E L +K +PPV+IF +K+ D + + L G TL K ++Q
Sbjct: 646 YMMGENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQR 705
Query: 192 NQTL 195
L
Sbjct: 706 EYAL 709
Score = 41 (19.5 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 105 NFARSALVKPITINVGRAGAASMNVVQEVEYV-KQEAKIVY-LLECLQ----KTEPPVLI 158
N+ + ++ T +GR G A + +V K ++ + Y L +C+ T PP L+
Sbjct: 740 NYDMAKTIEDYTHRIGRTGRAGKTGCA-ISFVTKDDSALFYDLKQCVSASPVSTCPPELM 798
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 311 (114.5 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 74/200 (37%), Positives = 113/200 (56%)
Query: 4 PFISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDK---KMVSLDVCR 60
PF+ L I R C A GG P+ + +K+G ++V TPGR++D+L ++ +L C
Sbjct: 513 PFLKLLNI--RACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCT 570
Query: 61 YLCLDEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVG 120
YL LDEADRM D+GFE V I + R RQT+LFSAT P+ ++ AR L KP+ I VG
Sbjct: 571 YLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVG 630
Query: 121 RAGAASMNVVQEVEYVKQEAKIVYLLECL-----QKTEPPVLIFAEKKQDVDAIHEYLLL 175
+ V Q VE +E+K LLE L + + L+F ++++ DA+ L+
Sbjct: 631 GRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMK 690
Query: 176 KGKPFFTLKSLK--EDQNNQ 193
+G +T S+ +DQ+++
Sbjct: 691 RG---YTSNSIHGGKDQHDR 707
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 311 (114.5 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 76/205 (37%), Positives = 111/205 (54%)
Query: 4 PFISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDK---KMVSLDVCR 60
PF+ AL LR A GG P+ + +K+G ++V TPGR++D+L ++ +L
Sbjct: 636 PFLKALN--LRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVT 693
Query: 61 YLCLDEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVG 120
Y+ LDEADRM DMGFE V I S R RQT+LFSAT P+ ++ AR L KPI I VG
Sbjct: 694 YVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVG 753
Query: 121 RAGAASMNVVQEVEYVKQEAKIVYLLECL-------QKTEPPVLIFAEKKQDVDAIHEYL 173
+ + Q VE +E K V LLE L + + LIF ++++ D + L
Sbjct: 754 GRSVVAPEITQIVEVCNEEKKFVRLLELLGNLYSTDENEDARSLIFVDRQEAADTLLREL 813
Query: 174 LLKGKPFFTLKSLKED-QNNQTLEN 197
+ KG P ++ K+ + T+E+
Sbjct: 814 MRKGYPCMSIHGGKDQIDRDSTIED 838
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 187 (70.9 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 10 PIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADR 69
P+ +RT IGG+ ++ GC +++ATPGRL+D+L+ + + L C Y+ LDEADR
Sbjct: 493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 552
Query: 70 MVDMGFEEDVRTI 82
M+DMGFE DV+ I
Sbjct: 553 MIDMGFEPDVQKI 565
Score = 148 (57.2 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 76 EEDVRTIFSFFRGQ---RQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
E+ + + +F G+ RQT++F+ATMP ++ ARS L +P + +G AG V Q+
Sbjct: 582 EDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK 641
Query: 133 VEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK-EDQ 190
V + + K LL L++ +PP++IF +K+ D + + L G TL K ++Q
Sbjct: 642 VFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 701
Query: 191 NNQTLEN 197
L N
Sbjct: 702 REFALSN 708
Score = 38 (18.4 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 103 IQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLE 147
+ N+ + ++ +GR G A + V K+++ + Y L+
Sbjct: 735 VVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK 779
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 187 (70.9 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 10 PIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADR 69
P+ +RT IGG+ ++ GC +++ATPGRL+D+L+ + + L C Y+ LDEADR
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553
Query: 70 MVDMGFEEDVRTI 82
M+DMGFE DV+ I
Sbjct: 554 MIDMGFEPDVQKI 566
Score = 148 (57.2 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 76 EEDVRTIFSFFRGQ---RQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
E+ + + +F G+ RQT++F+ATMP ++ ARS L +P + +G AG V Q+
Sbjct: 583 EDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK 642
Query: 133 VEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK-EDQ 190
V + + K LL L++ +PP++IF +K+ D + + L G TL K ++Q
Sbjct: 643 VFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 702
Query: 191 NNQTLEN 197
L N
Sbjct: 703 REFALSN 709
Score = 38 (18.4 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 103 IQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLE 147
+ N+ + ++ +GR G A + V K+++ + Y L+
Sbjct: 736 VVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK 780
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 187 (70.9 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 10 PIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADR 69
P+ +RT IGG+ ++ GC +++ATPGRL+D+L+ + + L C Y+ LDEADR
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553
Query: 70 MVDMGFEEDVRTI 82
M+DMGFE DV+ I
Sbjct: 554 MIDMGFEPDVQKI 566
Score = 148 (57.2 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 76 EEDVRTIFSFFRGQ---RQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
E+ + + +F G+ RQT++F+ATMP ++ ARS L +P + +G AG V Q+
Sbjct: 583 EDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK 642
Query: 133 VEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK-EDQ 190
V + + K LL L++ +PP++IF +K+ D + + L G TL K ++Q
Sbjct: 643 VFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 702
Query: 191 NNQTLEN 197
L N
Sbjct: 703 REFALSN 709
Score = 38 (18.4 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 103 IQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLE 147
+ N+ + ++ +GR G A + V K+++ + Y L+
Sbjct: 736 VVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK 780
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 187 (70.9 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 10 PIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADR 69
P+ +RT IGG+ ++ GC +++ATPGRL+D+L+ + + L C Y+ LDEADR
Sbjct: 494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553
Query: 70 MVDMGFEEDVRTI 82
M+DMGFE DV+ I
Sbjct: 554 MIDMGFEPDVQKI 566
Score = 148 (57.2 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 76 EEDVRTIFSFFRGQ---RQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
E+ + + +F G+ RQT++F+ATMP ++ ARS L +P + +G AG V Q+
Sbjct: 583 EDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQK 642
Query: 133 VEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK-EDQ 190
V + + K LL L++ +PP++IF +K+ D + + L G TL K ++Q
Sbjct: 643 VFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQ 702
Query: 191 NNQTLEN 197
L N
Sbjct: 703 REFALSN 709
Score = 38 (18.4 bits), Expect = 7.6e-15, Sum P(2) = 7.6e-15
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 103 IQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLE 147
+ N+ + ++ +GR G A + V K+++ + Y L+
Sbjct: 736 VVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK 780
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 305 (112.4 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 69/194 (35%), Positives = 114/194 (58%)
Query: 12 PLRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
P+ + L GG + ++ GCH+++ATPGRL+D++D+ ++ ++ CRYL LDEADRM
Sbjct: 343 PITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRM 402
Query: 71 VDMGFEEDVRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAA 125
+DMGFE +R I R +R T +FSAT PK+IQ A+ L + + + VGR G+
Sbjct: 403 LDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGST 462
Query: 126 SMNVVQEVEYVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
S N++Q++ +V+++ K YL++ L T L+F E K+ + YL + T+
Sbjct: 463 SENIMQKIVWVEEDEKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTI 522
Query: 184 KS-LKEDQNNQTLE 196
LK+ + + L+
Sbjct: 523 HGDLKQFEREKHLD 536
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 300 (110.7 bits), Expect = 5.0e-26, P = 5.0e-26
Identities = 74/181 (40%), Positives = 102/181 (56%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GGVP +Q + + +G +++ATPGRL+DML+ +L YL LDEADRM+DMG
Sbjct: 218 TCV-YGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMG 276
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L PI + VG +AS N+ Q V
Sbjct: 277 FEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIV 336
Query: 134 EYV----KQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
E V K++ YL Q E LIFA K+ D I +YL G P + K+
Sbjct: 337 EVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQ 396
Query: 190 Q 190
+
Sbjct: 397 R 397
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 300 (110.7 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 71/184 (38%), Positives = 101/184 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + + +G + +ATPGRL+DML+ +L YL LDEADRM+DMG
Sbjct: 232 TCV-YGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMG 290
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK++Q R L PI + +G AAS + Q V
Sbjct: 291 FEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLV 350
Query: 134 EYV----KQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
E + K++ + +L L + + +L+FA K+ D I YL G P + KE
Sbjct: 351 EVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKE- 409
Query: 190 QNNQ 193
QN +
Sbjct: 410 QNER 413
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 294 (108.6 bits), Expect = 5.0e-25, P = 5.0e-25
Identities = 71/189 (37%), Positives = 107/189 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG M SL I +GC+++ ATPGRL+D++ K+ + L RYL LDEADRM+D
Sbjct: 392 VRPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLD 451
Query: 73 MGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARSALVKP--ITINVGRAGAAS 126
MGF ED+ + + +RQTL+FSAT P IQ+ AR L KP + + VG+ G A
Sbjct: 452 MGFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREIL-KPDYLFVVVGQVGGAC 510
Query: 127 MNVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS 185
+V Q V V + K L+E LQ+ ++F + K+ D I +L + P ++
Sbjct: 511 SDVEQMVIEVDEFGKKDKLMEILQEIGSERTMVFVKTKKKADFIATFLCQEKVPSTSIHG 570
Query: 186 LKEDQNNQT 194
+E + +T
Sbjct: 571 DREQKERET 579
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 290 (107.1 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 76/187 (40%), Positives = 100/187 (53%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GGVP + + +G + +ATPGRL+DMLD +L YL LDEADRM+DMG
Sbjct: 227 TCV-YGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMG 285
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQT++FSAT PK++Q AR L I + VG AAS N+ Q V
Sbjct: 286 FEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIV 345
Query: 134 EYVKQEAKIVYL----LECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK-E 188
E V K L E L+ + VLIF K+ D I +L G P + K +
Sbjct: 346 EVVDNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQ 405
Query: 189 DQNNQTL 195
D+ + L
Sbjct: 406 DERDWVL 412
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 294 (108.6 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 72/188 (38%), Positives = 105/188 (55%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+T + GGV Q +K GC ++VATPGRL+DM+ K L+ YL LDEAD+M D
Sbjct: 407 LKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLDEADKMFD 466
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
GF V +I + R RQTLLFSAT ++ FAR+ L PI I++G G+A+ ++ Q
Sbjct: 467 FGFGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTILSDPIKISIGMIGSANSDITQI 526
Query: 133 VEYVKQEA-KIVYLLE--CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
V+ +K ++ K +L L ++ VLIF K V+ + L G TL K
Sbjct: 527 VQVLKSDSDKWNWLTNQLALLLSQGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQ 586
Query: 190 -QNNQTLE 196
+ +QT++
Sbjct: 587 IERSQTIQ 594
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 167 (63.8 bits), Expect = 9.6e-25, Sum P(2) = 9.6e-25
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++T IGG ++ G +++ATPGRL+D+L+ + + L+ C Y+ LDEADRM+D
Sbjct: 407 IKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLD 466
Query: 73 MGFEEDVRTIFSF 85
MGFE DV+ + +
Sbjct: 467 MGFEPDVQKVLEY 479
Score = 152 (58.6 bits), Expect = 9.6e-25, Sum P(2) = 9.6e-25
Identities = 40/123 (32%), Positives = 63/123 (51%)
Query: 76 EEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEY 135
EE + FS RQT++F+ATM I+ AR L +P +++G AG + V Q V
Sbjct: 495 EEALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYM 554
Query: 136 VKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYLLLKG-KPFFTLKSLKEDQNNQ 193
V ++ K L+E L+ +PP++IF +K+ D + + L G KP +DQ
Sbjct: 555 VPEDRKRKKLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREY 614
Query: 194 TLE 196
L+
Sbjct: 615 ALQ 617
Score = 36 (17.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 38 MVATPGRLMDMLDKKMVSLD-VCRYLCLDEADR 69
M A P L ++L+KK D + + L +A+R
Sbjct: 1 MAAEPPSLEELLEKKKREEDELAKPKFLSKAER 33
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 292 (107.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 64/168 (38%), Positives = 98/168 (58%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P Q +++G +++ATPGRL+D L++ SL C YL LDEADRM+DMG
Sbjct: 262 TCI-FGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMG 320
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQ L++SAT PK+++ A L I +N+G +A+ N++Q V
Sbjct: 321 FEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIV 380
Query: 134 EYVKQEAKIVYLLECLQ----KTEPPVLIFAEKKQDVDAIHEYLLLKG 177
+ + K++ L++ L + E +IF E K+ VD I + +G
Sbjct: 381 DVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQG 428
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 287 (106.1 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 69/188 (36%), Positives = 104/188 (55%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 201 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG 259
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L + I INVG +A+ N++Q V
Sbjct: 260 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIV 319
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ ++E K++ LLE + + E +IF E K+ D + + G P + K
Sbjct: 320 DVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQ 379
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 380 QERDWVLN 387
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 291 (107.5 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 75/193 (38%), Positives = 105/193 (54%)
Query: 4 PFISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCR 60
PF+ L LR A GG P+ + +K+G ++VAT GR++D+L ++VSL
Sbjct: 473 PFLKTLG--LRAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTT 530
Query: 61 YLCLDEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVG 120
Y+ LDEADRM DMGFE V IF+ R RQT+LFSATMPK + + L P+ I VG
Sbjct: 531 YIVLDEADRMFDMGFEPQVMKIFANVRPDRQTVLFSATMPKIMDALVKKVLKNPVEIEVG 590
Query: 121 RAGAASMNVVQEVEYVKQEAKIVYLLECL---QKTEPPV--LIFAEKKQDVDAIHEYLLL 175
+ + Q VE +++K LLE L K + V LIF E+++ D + LL
Sbjct: 591 GKSVVASEITQIVEIRDEKSKFNRLLELLGELYKDDDDVRSLIFVERQEKADELLRELLR 650
Query: 176 KGKPFFTLKSLKE 188
KG +L K+
Sbjct: 651 KGYGCMSLHGGKD 663
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 288 (106.4 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 66/166 (39%), Positives = 97/166 (58%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++GC +++ATPGRL+D L +L C YL LDEADRM+DMG
Sbjct: 386 TCV-FGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMG 444
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I S R RQTL++SAT PK+++ A L I IN+G +A+ N+ Q V
Sbjct: 445 FEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVV 504
Query: 134 ----EYVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYL 173
E+ K+E L + +E P ++IF E K+ VD + ++
Sbjct: 505 DVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFI 550
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 283 (104.7 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 65/188 (34%), Positives = 105/188 (55%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 187 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG 245
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L + + IN+G +A+ N++Q V
Sbjct: 246 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIV 305
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 306 DVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQ 365
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 366 QERDWVLN 373
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 283 (104.7 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 65/188 (34%), Positives = 105/188 (55%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 195 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG 253
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L + + IN+G +A+ N++Q V
Sbjct: 254 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIV 313
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 314 DVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQ 373
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 374 QERDWVLN 381
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 278 (102.9 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 69/186 (37%), Positives = 101/186 (54%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GGV +N + +K G ++VA PGRL+D + + + L L LDEAD+M D
Sbjct: 99 LRSVTVYGGVGVNPQVQKLKAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFD 158
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF D+R + +RQTLLFSATMP I+ A+ LV P+T+ VG A ++ V
Sbjct: 159 MGFLPDIRRVLKHLPPRRQTLLFSATMPIDIRTLAQDILVDPVTVQVGTV-APAVTVAHA 217
Query: 133 VEYVKQEAKIVYLLECLQKTEPP-VLIFAEKKQDVDAIHEYLLLKGKPFFTLK-SLKEDQ 190
+ V+Q K LLE L+ T+ VLIF K + E L G +L+ +L +++
Sbjct: 218 LYPVEQHLKTPLLLELLRHTDTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNR 277
Query: 191 NNQTLE 196
L+
Sbjct: 278 RQAALD 283
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 281 (104.0 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 68/184 (36%), Positives = 100/184 (54%)
Query: 1 MGIPFISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCR 60
+ I F +L + + TCL GG +++G ++VATPGRL+D LD ++ C
Sbjct: 221 VSIDFCHSLGLKM-TCL-FGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCS 278
Query: 61 YLCLDEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVG 120
YL LDEADRM+DMGFE ++ I R RQTL+FSAT PK+++ A +NVG
Sbjct: 279 YLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVG 338
Query: 121 RAG-AASMNVVQEVEYVKQEAKIVYLLECLQ----KTEPPVLIFAEKKQDVDAIHEYLLL 175
AA+ N+ Q V+ +++ AK L+E L + E +IF E K+ D + +
Sbjct: 339 SLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMRR 398
Query: 176 KGKP 179
G P
Sbjct: 399 DGWP 402
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 277 (102.6 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 62/173 (35%), Positives = 98/173 (56%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GGVP + ++KG +++ATPGRL+DM++ +L YL LDEADRM+DMG
Sbjct: 204 TCI-YGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMG 262
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVG----RAGAASMNVV 130
F+ +R I S R RQTL +SAT PK+++ ++ L P + +G +A A +V
Sbjct: 263 FDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIV 322
Query: 131 QEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
+ ++ K+V LLE + +L+F + K+ D I L + G P ++
Sbjct: 323 DVISESQKYNKLVKLLEDIMDGSR-ILVFLDTKKGCDQITRQLRMDGWPALSI 374
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 284 (105.0 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 65/157 (41%), Positives = 92/157 (58%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TCL GG P L +++G ++VATPGRL D+L+ KM+ L LDEADRM+DMG
Sbjct: 539 TCL-YGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMG 597
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG--AASMNVVQE 132
FE +R I + +RQTL+++AT PK+++ A LV P+ +N+GR AA+ + Q
Sbjct: 598 FEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQY 657
Query: 133 VEYVKQEAKIVYLLECLQKTE--PPVLIFAEKKQDVD 167
VE V Q K L + L+ E V+IF K+ D
Sbjct: 658 VEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCD 694
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 283 (104.7 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 70/188 (37%), Positives = 102/188 (54%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 355 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD 414
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 133 VEYVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKED 189
VE + +K +L L + + VL+F KK + + + L +G L + +
Sbjct: 475 VEILHSGSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQS 534
Query: 190 QNNQTLEN 197
+ N+ + +
Sbjct: 535 ERNKVISD 542
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 278 (102.9 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 68/186 (36%), Positives = 103/186 (55%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GGVP + + +G + +ATPGRL+DML+ +L YL LDEADRM+DMG
Sbjct: 230 TCV-YGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMG 288
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++N A L I +N+G +A+ + Q V
Sbjct: 289 FEPQIRKIIGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIV 348
Query: 134 EYVKQEAKIVYLLECLQK------TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK 187
E V + K ++ ++K ++ +LIF K+ D I +L G P ++ K
Sbjct: 349 EVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDK 408
Query: 188 EDQNNQ 193
+ QN +
Sbjct: 409 Q-QNER 413
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 284 (105.0 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 62/190 (32%), Positives = 107/190 (56%)
Query: 10 PIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDE 66
P+ +R GG + Q + +K+G ++V TPGR++D+L K+ +L +L +DE
Sbjct: 628 PLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDE 687
Query: 67 ADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAAS 126
ADRM DMGFE + I R +RQT+LFSAT P++++ AR L KP+ I VG +
Sbjct: 688 ADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVN 747
Query: 127 MNVVQEVEYVKQEAKIVYLLECLQK-TEP-PVLIFAEKKQDVDAIHEYLLLKGKPFFTLK 184
++ Q VE + + + LLE L + +E +L+F + ++ DA++ ++ P +L
Sbjct: 748 KDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLH 807
Query: 185 SLKEDQNNQT 194
K+ + ++
Sbjct: 808 GGKDQTDRES 817
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 278 (102.9 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 67/185 (36%), Positives = 102/185 (55%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G +++ATPGRL+DML+ + +L YL LDEADRM+DMG
Sbjct: 270 TCI-YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG 328
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGA-ASMNVVQEV 133
FE +R I S R RQTLL+SAT P++++ AR L P +G A+ ++ Q +
Sbjct: 329 FEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVI 388
Query: 134 EYVKQEAKIVYLLECLQKTEP--PVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK-EDQ 190
E V K LL L++ +LIF E K+ D + L + G P + K + +
Sbjct: 389 EIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSE 448
Query: 191 NNQTL 195
++ L
Sbjct: 449 RDRVL 453
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 278 (102.9 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 63/159 (39%), Positives = 91/159 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TCL GG P L +++G ++VATPGRL D+L+ + +SL YL LDEADRM+DMG
Sbjct: 262 TCL-YGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMG 320
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG--AASMNVVQE 132
FE +R I +RQTL+++AT PK ++ A LV P +N+G A+ ++ Q
Sbjct: 321 FEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQH 380
Query: 133 VEYVKQEAKIVYLLECLQKTEP--PVLIFAEKKQDVDAI 169
+E V K L + L+ EP V+IF K+ D +
Sbjct: 381 IEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQL 419
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 280 (103.6 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 66/166 (39%), Positives = 94/166 (56%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG + + +KKG +++ATPGRL+D+L+ +L YL LDEADRM+DMG
Sbjct: 489 TCV-YGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMG 547
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I S R RQTL+FSAT PK++Q A L I +++G A+ NV Q V
Sbjct: 548 FEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIV 607
Query: 134 EYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKG 177
E + K +L L + V++FAE ++ VD + L G
Sbjct: 608 EVCQDFEKKERMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSG 653
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 275 (101.9 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 63/170 (37%), Positives = 98/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 195 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMG 253
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L + INVG +A+ N++Q V
Sbjct: 254 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIV 313
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 314 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 363
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 279 (103.3 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 62/158 (39%), Positives = 92/158 (58%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGF 75
CL GG P L I++G ++VATPGRL D+L+ K +SL YL LDEADRM+DMGF
Sbjct: 334 CL-YGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGF 392
Query: 76 EEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG--AASMNVVQEV 133
E +R I + +RQTL+++AT PK+++ A LV P +N+G A+ ++ Q +
Sbjct: 393 EPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTI 452
Query: 134 EYVKQEAKIVYLLECLQKTEP--PVLIFAEKKQDVDAI 169
E + K L + L+ EP ++IF K+ D +
Sbjct: 453 EVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQL 490
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 275 (101.9 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 66/188 (35%), Positives = 101/188 (53%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GGVP + + +G + +ATPGRL+DML+ +L YL LDEADRM+DMG
Sbjct: 245 TCV-YGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMG 303
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I S R RQT ++SAT PK+++ A L I +N+G +A+ + Q V
Sbjct: 304 FEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIV 363
Query: 134 EYV----KQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
E + K++ I +L + ++ L+F K+ D I +L G P ++ K+
Sbjct: 364 EVISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQ 423
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 424 QERDWVLN 431
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 280 (103.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 64/176 (36%), Positives = 99/176 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML ++ +L Y+ LDEADR
Sbjct: 474 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 533
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P+ ++ AR L KPI + VG +V
Sbjct: 534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDV 593
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q+V +++E K + LLE L + V+IF +K++ D + + L+ P +L
Sbjct: 594 EQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSL 649
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 280 (103.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 64/176 (36%), Positives = 99/176 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML ++ +L Y+ LDEADR
Sbjct: 474 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 533
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P+ ++ AR L KPI + VG +V
Sbjct: 534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDV 593
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q+V +++E K + LLE L + V+IF +K++ D + + L+ P +L
Sbjct: 594 EQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSL 649
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 280 (103.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 64/176 (36%), Positives = 99/176 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML ++ +L Y+ LDEADR
Sbjct: 474 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 533
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P+ ++ AR L KPI + VG +V
Sbjct: 534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDV 593
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q+V +++E K + LLE L + V+IF +K++ D + + L+ P +L
Sbjct: 594 EQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSL 649
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 280 (103.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 64/176 (36%), Positives = 99/176 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML ++ +L Y+ LDEADR
Sbjct: 474 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 533
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P+ ++ AR L KPI + VG +V
Sbjct: 534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDV 593
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q+V +++E K + LLE L + V+IF +K++ D + + L+ P +L
Sbjct: 594 EQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSL 649
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 280 (103.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 64/176 (36%), Positives = 99/176 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML ++ +L Y+ LDEADR
Sbjct: 474 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 533
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P+ ++ AR L KPI + VG +V
Sbjct: 534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDV 593
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q+V +++E K + LLE L + V+IF +K++ D + + L+ P +L
Sbjct: 594 EQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSL 649
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 280 (103.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 64/176 (36%), Positives = 99/176 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML ++ +L Y+ LDEADR
Sbjct: 474 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 533
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P+ ++ AR L KPI + VG +V
Sbjct: 534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDV 593
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q+V +++E K + LLE L + V+IF +K++ D + + L+ P +L
Sbjct: 594 EQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSL 649
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 280 (103.6 bits), Expect = 3.1e-23, P = 3.1e-23
Identities = 64/176 (36%), Positives = 99/176 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML ++ +L Y+ LDEADR
Sbjct: 474 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 533
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P+ ++ AR L KPI + VG +V
Sbjct: 534 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDV 593
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q+V +++E K + LLE L + V+IF +K++ D + + L+ P +L
Sbjct: 594 EQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSL 649
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 277 (102.6 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 66/178 (37%), Positives = 102/178 (57%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGF 75
C+ GG N + V+ G +++ATPGRL D+ ++++L YL LDEADRM+DMGF
Sbjct: 384 CI-YGGGDRNAQIKVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGF 442
Query: 76 EEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE-VE 134
E + I R RQT++ SAT P ++ A+S L P+ + VG A++N VQ+ V
Sbjct: 443 EPQIMKIILDIRPDRQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVL 502
Query: 135 YVKQEAKIVYLLECLQKTEP--PVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQ 190
+V+++ K Y+ + + + EP VLIF KK D + L L+G ++SL D+
Sbjct: 503 FVQEDEKKDYVFDFIHRMEPLDKVLIFVGKKLKADDLSSDLCLQG---IAVQSLHGDR 557
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 279 (103.3 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 64/176 (36%), Positives = 100/176 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML + ++ +L Y+ LDEADR
Sbjct: 473 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADR 532
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P+ ++ AR L KPI + VG +V
Sbjct: 533 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDV 592
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q V +++E K + LLE L + + V+IF +K++ D + + L+ P +L
Sbjct: 593 EQHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSL 648
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 273 (101.2 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 57/165 (34%), Positives = 97/165 (58%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PLR+ + GGVP+N ++ ++ G ++VATPGRL+D++ + V + L LDEADRM
Sbjct: 100 LPLRSAVVFGGVPINPQINKLRHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRM 159
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF D++ I + +RQ L+FSAT +I+ A+ + P+ I+V AA+ V
Sbjct: 160 LDMGFIRDIKKILALLPAKRQNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVK 219
Query: 131 QEVEYVKQEAKIVYLLECL-QKTEPPVLIFAEKKQDVDAIHEYLL 174
Q + V + K L++ + Q+ VL+F+ K + + + L+
Sbjct: 220 QWICPVDKTQKSALLIQLIKQENWQQVLVFSRTKHGANRLAKSLI 264
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 278 (102.9 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 62/178 (34%), Positives = 101/178 (56%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEA 67
+ LR GG +++ + +K+G ++V TPGR++DML + ++ +L Y+ +DEA
Sbjct: 457 LALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEA 516
Query: 68 DRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASM 127
DRM DMGFE V I R RQT++FSAT P+ ++ AR L KP+ + VG
Sbjct: 517 DRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCS 576
Query: 128 NVVQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
+V Q V +++E K + LLE L + + V+IF +K++ D + + L+ P +L
Sbjct: 577 DVEQHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSL 634
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 272 (100.8 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 70/195 (35%), Positives = 105/195 (53%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+ ++ C GGVP ++ +KK ++VATPGRL+D+L + V L YL LDEADRM
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRM 267
Query: 71 VDMGFEEDVRTIF-SFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN- 128
++ GFEED++ I +RQTL+F+AT PK+++ A + + PI +++G + N
Sbjct: 268 LEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANK 327
Query: 129 -VVQEVEYVKQEAKIVYLLECLQK--TEPP----VLIFAEKKQDVDAIHEYLLLKGKPFF 181
+ Q VE V K LLE L+K + P VLIFA K++ + L G
Sbjct: 328 RITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVA 387
Query: 182 TLKS-LKEDQNNQTL 195
+ L + Q Q L
Sbjct: 388 AIHGDLSQQQRTQAL 402
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 277 (102.6 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 70/187 (37%), Positives = 103/187 (55%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK SL +L DEADRM D
Sbjct: 359 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFD 418
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR LV PI + G G A+ ++ Q
Sbjct: 419 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDITQI 478
Query: 133 VEYVKQ-EAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKE 188
VE ++ + K +L L + + VL+F KK + + + L+ +G L + +
Sbjct: 479 VEVLQSGQDKWGWLTRRLVEFTSAGSVLVFVTKKANCEELATNLIQEGYSLGLLHGDMDQ 538
Query: 189 DQNNQTL 195
+ N+ +
Sbjct: 539 SERNKVI 545
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 272 (100.8 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 120 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 178
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 179 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 238
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 239 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 298
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 299 QERDWVLN 306
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 269 (99.8 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 56/158 (35%), Positives = 91/158 (57%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR + GG + + +++G H++VATPGRL+D+++++ VSLD L LDEAD+M+D
Sbjct: 109 LRVVMVCGGAKIGGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLD 168
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GF +R I +RQTL FSATMPK +++ A + L P ++V + + Q
Sbjct: 169 LGFIHALRAIAKNVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQR 228
Query: 133 VEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAI 169
V +V+Q K L+E ++ E ++F K D +
Sbjct: 229 VCFVEQPEKASLLIEKIRDPELRSAIVFTRTKHGADGV 266
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 272 (100.8 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 199 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 377
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 378 QERDWVLN 385
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 272 (100.8 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 199 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 377
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 378 QERDWVLN 385
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 272 (100.8 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 199 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 377
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 378 QERDWVLN 385
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 272 (100.8 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 199 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 377
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 378 QERDWVLN 385
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 272 (100.8 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 199 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 377
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 378 QERDWVLN 385
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 272 (100.8 bits), Expect = 8.2e-23, P = 8.2e-23
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 199 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 377
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 378 QERDWVLN 385
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 273 (101.2 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 71/182 (39%), Positives = 104/182 (57%)
Query: 5 FISALPIPLRTCLA----IGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCR 60
F+ A TC+ GG + S+ I +GC+++ ATPGRLMD++ K+ + L R
Sbjct: 360 FLEARKFSFGTCVRPVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKEKIGLGQIR 419
Query: 61 YLCLDEADRMVDMGFEEDVRTIFSF----FRGQRQTLLFSATMPK-KIQNFARSALVKPI 115
YL LDEADRM+DMGF +++ + SF + QRQTL+FSAT P+ +++A L K +
Sbjct: 420 YLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWAGEFL-KNL 478
Query: 116 TI---NVGRAGAASMNVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHE 171
TI VG+ G A +V Q V V Q +K L+E L+ E ++F E K+ D I
Sbjct: 479 TICLVAVGQVGGACSDVQQTVLQVGQYSKREKLVEILRNIGEERTMVFVETKKKADFIAT 538
Query: 172 YL 173
+L
Sbjct: 539 FL 540
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 275 (101.9 bits), Expect = 8.9e-23, P = 8.9e-23
Identities = 70/189 (37%), Positives = 102/189 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 355 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD 414
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 133 VEYVKQ-EAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKE 188
VE + +K +L L + + VL+F KK + + + L +G L + +
Sbjct: 475 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQ 534
Query: 189 DQNNQTLEN 197
+ N+ + +
Sbjct: 535 SERNKVISD 543
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 275 (101.9 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 70/189 (37%), Positives = 102/189 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 355 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD 414
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 133 VEYVKQ-EAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKE 188
VE + +K +L L + + VL+F KK + + + L +G L + +
Sbjct: 475 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ 534
Query: 189 DQNNQTLEN 197
+ N+ + +
Sbjct: 535 SERNKVISD 543
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 275 (101.9 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 70/189 (37%), Positives = 102/189 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 355 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD 414
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 133 VEYVKQ-EAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKE 188
VE + +K +L L + + VL+F KK + + + L +G L + +
Sbjct: 475 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ 534
Query: 189 DQNNQTLEN 197
+ N+ + +
Sbjct: 535 SERNKVISD 543
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 275 (101.9 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 70/189 (37%), Positives = 102/189 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 355 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD 414
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 133 VEYVKQ-EAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKE 188
VE + +K +L L + + VL+F KK + + + L +G L + +
Sbjct: 475 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ 534
Query: 189 DQNNQTLEN 197
+ N+ + +
Sbjct: 535 SERNKVISD 543
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 275 (101.9 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 70/189 (37%), Positives = 102/189 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 355 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD 414
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 133 VEYVKQ-EAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKE 188
VE + +K +L L + + VL+F KK + + + L +G L + +
Sbjct: 475 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ 534
Query: 189 DQNNQTLEN 197
+ N+ + +
Sbjct: 535 SERNKVISD 543
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 65/188 (34%), Positives = 103/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 256 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 314
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 315 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 374
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 375 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 434
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 435 QERDWVLN 442
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 62/170 (36%), Positives = 98/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 200 TCV-YGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMG 258
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L + IN+G +A+ N++Q V
Sbjct: 259 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIV 318
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 319 DVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWP 368
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 274 (101.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 70/187 (37%), Positives = 101/187 (54%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 355 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD 414
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 133 VEYVKQ-EAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKE 188
VE + +K +L L + + VL+F KK + + + L +G L + +
Sbjct: 475 VEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQ 534
Query: 189 DQNNQTL 195
+ N+ +
Sbjct: 535 SERNKVI 541
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 272 (100.8 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 66/167 (39%), Positives = 96/167 (57%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG+ ++ + KGC+++ ATPGRL D++ + + L RYL LDEADRM+D
Sbjct: 383 VRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRGKIGLSKVRYLVLDEADRMLD 442
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSAL-VKPITINVGRAGAASM 127
MGFE ++R + + + +RQTL+FSAT P+ IQ A L V I + VG G A
Sbjct: 443 MGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFLKVDYIFLAVGVVGGACS 502
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q V V Q +K LLE L+ T ++F E K+ D I +L
Sbjct: 503 DVEQTVVQVDQYSKRDQLLELLRATGNERTMVFVETKRSADFIATFL 549
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 63/170 (37%), Positives = 97/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 197 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 255
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L INVG +A+ N++Q V
Sbjct: 256 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 315
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 316 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 365
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 63/170 (37%), Positives = 97/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 197 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 255
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L INVG +A+ N++Q V
Sbjct: 256 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 315
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 316 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 365
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 63/170 (37%), Positives = 97/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 197 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 255
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L INVG +A+ N++Q V
Sbjct: 256 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 315
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 316 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 365
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 63/170 (37%), Positives = 97/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 197 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 255
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L INVG +A+ N++Q V
Sbjct: 256 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 315
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 316 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 365
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 271 (100.5 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 64/167 (38%), Positives = 97/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 368 VRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLD 427
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTLLFSAT P++IQ A L + + VG+ G A
Sbjct: 428 MGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACR 487
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q + V Q +K L+E L+ + ++F E K+ D I +L
Sbjct: 488 DVQQSILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADFIATFL 534
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 270 (100.1 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 64/181 (35%), Positives = 101/181 (55%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 199 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 377
Query: 190 Q 190
Q
Sbjct: 378 Q 378
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 271 (100.5 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 64/168 (38%), Positives = 101/168 (60%)
Query: 13 LRTCLAIGGV-PMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMV 71
+R + GG+ P++ DV +KGC+++ ATPGRL+D++ K+ + L RYL LDEADRM+
Sbjct: 380 VRPVVVYGGIQPVHAMRDV-EKGCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRML 438
Query: 72 DMGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAAS 126
DMGF ++ + + + +RQTL+FSAT P++I+ A + L + + VG G A
Sbjct: 439 DMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGGAC 498
Query: 127 MNVVQEVEYVKQEAKIVYLLECLQKTEPP-VLIFAEKKQDVDAIHEYL 173
+V Q V +++ K+ LLE L+ +E +IF K+ D I YL
Sbjct: 499 SDVAQTVLEMRENGKMEKLLEILKSSEKERTMIFVNTKKKADFIAGYL 546
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 271 (100.5 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG + S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 374 VRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLD 433
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 434 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACR 493
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q V V Q +K L+E L+ + ++F E K+ D I +L
Sbjct: 494 DVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFL 540
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 271 (100.5 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG + S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 394 VRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLD 453
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 454 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACR 513
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q V V Q +K L+E L+ + ++F E K+ D I +L
Sbjct: 514 DVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFL 560
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 271 (100.5 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 64/167 (38%), Positives = 98/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG + S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 395 VRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLD 454
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 455 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACR 514
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q V V Q +K L+E L+ + ++F E K+ D I +L
Sbjct: 515 DVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFL 561
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 271 (100.5 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 63/170 (37%), Positives = 97/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 276 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 334
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L INVG +A+ N++Q V
Sbjct: 335 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 394
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 395 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 444
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 271 (100.5 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 63/170 (37%), Positives = 97/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 276 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 334
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L INVG +A+ N++Q V
Sbjct: 335 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 394
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 395 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 444
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 271 (100.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/170 (37%), Positives = 97/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 278 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 336
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L INVG +A+ N++Q V
Sbjct: 337 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 396
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 397 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 446
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 271 (100.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/170 (37%), Positives = 97/170 (57%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L C YL LDEADRM+DMG
Sbjct: 278 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG 336
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L INVG +A+ N++Q V
Sbjct: 337 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIV 396
Query: 134 EYV---KQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
+ +++ K++ L+E + + E +IF E K+ D + + G P
Sbjct: 397 DVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 446
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 269 (99.8 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 65/188 (34%), Positives = 102/188 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 199 TCI-YGGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 258 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 317
Query: 134 EY---VKQEAKIVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ V+++ K++ L+E + + E ++F E K+ D + + G P + K
Sbjct: 318 DVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQ 377
Query: 190 QNNQTLEN 197
Q + N
Sbjct: 378 QERDWVLN 385
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 268 (99.4 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 67/178 (37%), Positives = 98/178 (55%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVC--RYLCLDEADRM 70
+R C GGV M+Q + ++ G ++VA PGRL+D + + ++D+C L +DEADRM
Sbjct: 99 IRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRG--TIDICGVETLIIDEADRM 156
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
DMGF+ D+++I QTLLFSATMP +++ P+TI +G AS +V
Sbjct: 157 FDMGFQPDIQSILKCLVQPHQTLLFSATMPPEVRKLTLETQTNPVTIQIGTQAPAS-SVS 215
Query: 131 QEVEYVKQEAKIVYLLECLQKTEPP-VLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK 187
V VK K L+E L+ TE VLIFA K + + + + G FT SL+
Sbjct: 216 HSVYPVKNHQKTPLLIEILKTTETKSVLIFARTKYGAENLADEISRAG---FTTASLQ 270
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 270 (100.1 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 64/167 (38%), Positives = 97/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 367 VRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLD 426
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTLLFSAT P++IQ A L + + VG+ G A
Sbjct: 427 MGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVGGACR 486
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q + V Q +K L+E L+ + ++F E K+ D I +L
Sbjct: 487 DVQQTILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADFIATFL 533
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 270 (100.1 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 66/160 (41%), Positives = 91/160 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 350 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFD 409
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 410 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 469
Query: 133 VE-YVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAI 169
VE + +K +L L + + VL+F KK + + +
Sbjct: 470 VEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEEL 509
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 267 (99.0 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 62/168 (36%), Positives = 101/168 (60%)
Query: 16 CLAI-GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
C+A+ GGV + + IK +++VATPGRL+D+++ ++L YL LDEADRM++ G
Sbjct: 254 CVAVYGGVSKDDQIRKIKTA-NVVVATPGRLVDLINDGAINLGKVNYLVLDEADRMLEKG 312
Query: 75 FEEDVRTIFS-FFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN--VVQ 131
FEED++TI S +RQTL+F+AT PK+++ A + + P+ + VG S N + Q
Sbjct: 313 FEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANKRITQ 372
Query: 132 EVEYVKQ---EAKIVYLLE---CLQKTEPPVLIFAEKKQDVDAIHEYL 173
VE + + E K++ LL + ++ +LIFA K++ I +L
Sbjct: 373 VVEVINKFDKEKKLIQLLRKYNANESSDNKILIFALYKKEASRIENFL 420
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 161 (61.7 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 10 PIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADR 69
P+ +GG + ++ G +++ATPGRL+D ++++M+ L C Y+ +DEADR
Sbjct: 450 PLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADR 509
Query: 70 MVDMGFEEDVRTI 82
M+D+GFEE V I
Sbjct: 510 MIDLGFEEPVNKI 522
Score = 136 (52.9 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 35/107 (32%), Positives = 54/107 (50%)
Query: 90 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLL-EC 148
RQT++++ATMP ++ AR L +P + +G AG A V Q VE + E K L E
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLGEI 614
Query: 149 LQKTE--PPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNNQ 193
L + PP+++F K++ DAI + G TL K + +
Sbjct: 615 LSSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQRE 661
Score = 44 (20.5 bits), Expect = 9.0e-13, Sum P(2) = 9.0e-13
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 105 NFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLE 147
NF + ++ T +GR G A + V ++A ++Y L+
Sbjct: 695 NFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLK 737
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 269 (99.8 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 63/167 (37%), Positives = 98/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG + S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 396 VRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLD 455
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 456 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACR 515
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q + V Q +K L+E L+ + ++F E K+ D I +L
Sbjct: 516 DVQQTILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADFIATFL 562
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 269 (99.8 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 63/167 (37%), Positives = 98/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG + S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 396 VRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLD 455
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 456 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACR 515
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q + V Q +K L+E L+ + ++F E K+ D I +L
Sbjct: 516 DVQQTILQVGQYSKREKLVEILRNIGDERTMVFVETKKKADFIATFL 562
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 263 (97.6 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 62/187 (33%), Positives = 103/187 (55%)
Query: 12 PLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMV 71
PL L GGV + Q L + ++VATPGRL+D+ + +SLD ++L LDEADR++
Sbjct: 127 PLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQSHISLDAIKHLVLDEADRLL 186
Query: 72 DMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVK-PITINVGRAGAASMNVV 130
+MGF D++ + + ++QTLLFSAT+P+ + + A L P+ + A +
Sbjct: 187 EMGFWPDMQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIE 246
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+++ V + +K L+ L++ + P VL+F + D DAI + L+ G L K+
Sbjct: 247 EQLYLVNKGSKAQALIALLKQYQWPQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQ 306
Query: 190 Q-NNQTL 195
+QTL
Sbjct: 307 TVRSQTL 313
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 263 (97.6 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 62/187 (33%), Positives = 103/187 (55%)
Query: 12 PLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMV 71
PL L GGV + Q L + ++VATPGRL+D+ + +SLD ++L LDEADR++
Sbjct: 127 PLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQSHISLDAIKHLVLDEADRLL 186
Query: 72 DMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVK-PITINVGRAGAASMNVV 130
+MGF D++ + + ++QTLLFSAT+P+ + + A L P+ + A +
Sbjct: 187 EMGFWPDMQKLMAMMPKRKQTLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIE 246
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+++ V + +K L+ L++ + P VL+F + D DAI + L+ G L K+
Sbjct: 247 EQLYLVNKGSKAQALIALLKQYQWPQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQ 306
Query: 190 Q-NNQTL 195
+QTL
Sbjct: 307 TVRSQTL 313
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 263 (97.6 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 61/162 (37%), Positives = 87/162 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R+ + GGV +N + ++ G ++VATPGRL+D+ + V LD L LDEADRM+D
Sbjct: 104 IRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLD 163
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF D+R + + +RQ LLFSAT I+ A L P+ I V R AS V Q
Sbjct: 164 MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQH 223
Query: 133 VEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYL 173
V +V ++ K L + K VL+F K + + E L
Sbjct: 224 VHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQL 265
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 270 (100.1 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 66/160 (41%), Positives = 91/160 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 355 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFD 414
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 415 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474
Query: 133 VE-YVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAI 169
VE + +K +L L + + VL+F KK + + +
Sbjct: 475 VEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEEL 514
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 270 (100.1 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 66/160 (41%), Positives = 91/160 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG M + +++G ++V TPGRL+D + KK +L YL DEADRM D
Sbjct: 357 LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFD 416
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGFE VR+I S R RQTLLFSAT KKI+ AR L+ PI + G G A+ +V Q
Sbjct: 417 MGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 476
Query: 133 VE-YVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAI 169
VE + +K +L L + + VL+F KK + + +
Sbjct: 477 VEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEEL 516
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 268 (99.4 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 64/167 (38%), Positives = 97/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG + S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 392 VRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLD 451
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 452 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACR 511
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q V Q +K LLE L+ + ++F E K+ D I +L
Sbjct: 512 DVQQADLQVGQYSKREKLLEILRNIGDERTMVFVETKKKADFIATFL 558
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 268 (99.4 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 63/167 (37%), Positives = 98/167 (58%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG + S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 395 VRAVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLD 454
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 455 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACR 514
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYL 173
+V Q + V Q +K L+E L+ + ++F E K+ D I +L
Sbjct: 515 DVQQTILQVGQYSKREKLVEILRSIGDERTMVFVETKKKADFIATFL 561
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 269 (99.8 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 65/198 (32%), Positives = 104/198 (52%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR C GG + ++ +KKG ++V TPGR++D+L ++++L C ++ LDEADR
Sbjct: 397 LRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADR 456
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M D+GFE V I + R RQT+LFSAT P+K++ A+ L P+ I VG + +
Sbjct: 457 MFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVAPEI 516
Query: 130 VQEV-----------EYVKQEAKIVY-LLECLQKTEPP--VLIFAEKKQDVDAIHEYLLL 175
QEV +Y +Q + ++ +L Q P +L+F EK+ D D + LL
Sbjct: 517 KQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELVANLLS 576
Query: 176 KGKPFFTLKSLKEDQNNQ 193
P + K+ + +
Sbjct: 577 NKYPAIAIHGGKDQMDRK 594
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 269 (99.8 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 65/198 (32%), Positives = 104/198 (52%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR C GG + ++ +KKG ++V TPGR++D+L ++++L C ++ LDEADR
Sbjct: 397 LRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADR 456
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M D+GFE V I + R RQT+LFSAT P+K++ A+ L P+ I VG + +
Sbjct: 457 MFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVAPEI 516
Query: 130 VQEV-----------EYVKQEAKIVY-LLECLQKTEPP--VLIFAEKKQDVDAIHEYLLL 175
QEV +Y +Q + ++ +L Q P +L+F EK+ D D + LL
Sbjct: 517 KQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELVANLLS 576
Query: 176 KGKPFFTLKSLKEDQNNQ 193
P + K+ + +
Sbjct: 577 NKYPAIAIHGGKDQMDRK 594
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 264 (98.0 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 62/187 (33%), Positives = 105/187 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG S+ I +GC+++ ATPGRL+D+++K +SL +YL LDEADRM+D
Sbjct: 273 IRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLD 332
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF D++ + S+ + +RQTL+FSAT P+++Q A L I + +G A
Sbjct: 333 MGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACS 392
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKTEPP-VLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+V Q + V + +K L+E LQ T ++F + K+ D + +L + P ++
Sbjct: 393 DVQQNILQVPRLSKRDKLIEILQSTGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGD 452
Query: 187 KEDQNNQ 193
+E + +
Sbjct: 453 REQRERE 459
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 264 (98.0 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 62/187 (33%), Positives = 105/187 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG S+ I +GC+++ ATPGRL+D+++K +SL +YL LDEADRM+D
Sbjct: 273 IRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLD 332
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF D++ + S+ + +RQTL+FSAT P+++Q A L I + +G A
Sbjct: 333 MGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACS 392
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKTEPP-VLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+V Q + V + +K L+E LQ T ++F + K+ D + +L + P ++
Sbjct: 393 DVQQNILQVPRLSKRDKLIEILQSTGGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGD 452
Query: 187 KEDQNNQ 193
+E + +
Sbjct: 453 REQRERE 459
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 265 (98.3 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 63/168 (37%), Positives = 99/168 (58%)
Query: 13 LRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMV 71
++T + GG ++ ++ G H+++ATPGRL+D++++ + L CRYL LDEADRM+
Sbjct: 251 IQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRML 310
Query: 72 DMGFEEDVRTIFSFF---RGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
DMGFE +R I + R T +FSAT PK+IQ A+ L I + VGR G+ S
Sbjct: 311 DMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSE 370
Query: 128 NVVQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYL 173
N+ Q + +V + K L+E L + +E VL+F E K+ + + +L
Sbjct: 371 NIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFL 418
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 269 (99.8 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 62/176 (35%), Positives = 96/176 (54%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LR GG +++ + +K+G ++V TPGR++DML ++ +L Y+ LDEADR
Sbjct: 612 LRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 671
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGFE V I R RQT++FSAT P++++ AR L KPI + VG V
Sbjct: 672 MFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEV 731
Query: 130 VQEVEYVKQEAKIVYLLECL--QKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTL 183
Q V + +AK LLE L + +++F +K+++ D + L+ P +L
Sbjct: 732 EQHVVILNDDAKFFKLLELLGIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSL 787
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 270 (100.1 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 71/194 (36%), Positives = 111/194 (57%)
Query: 17 LAI-GGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADRMVD 72
LA+ GG + + L V+KKG ++V TPGR++D+L + K+ +L+ ++ LDEADR++D
Sbjct: 828 LAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLD 887
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GFE + I R +QT + SAT P IQN A+ L KPI I VG G + N+ Q
Sbjct: 888 LGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIYQF 947
Query: 133 VEYVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIH------EY--LLLKGKPF-- 180
VE +++ K+ LL+ L + VLIF K+ + D ++ +Y L+L G
Sbjct: 948 VEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQT 1007
Query: 181 ---FTLKSLKEDQN 191
FTL+ K+++N
Sbjct: 1008 DRQFTLEKFKKEEN 1021
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 270 (100.1 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 71/194 (36%), Positives = 111/194 (57%)
Query: 17 LAI-GGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADRMVD 72
LA+ GG + + L V+KKG ++V TPGR++D+L + K+ +L+ ++ LDEADR++D
Sbjct: 828 LAVYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLD 887
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GFE + I R +QT + SAT P IQN A+ L KPI I VG G + N+ Q
Sbjct: 888 LGFESQIYNILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIYQF 947
Query: 133 VEYVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIH------EY--LLLKGKPF-- 180
VE +++ K+ LL+ L + VLIF K+ + D ++ +Y L+L G
Sbjct: 948 VEIIEESKKVFRLLKLLGEWIKYGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQT 1007
Query: 181 ---FTLKSLKEDQN 191
FTL+ K+++N
Sbjct: 1008 DRQFTLEKFKKEEN 1021
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 258 (95.9 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 58/168 (34%), Positives = 94/168 (55%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+P+++ + GG M ++K+G ++VATPGRL++ L + V L ++L LDEADRM
Sbjct: 118 LPIKSGVVYGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRM 177
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF D+ + + + QTL+FSAT ++++ A L P TI+V + S +
Sbjct: 178 LDMGFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIK 237
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
Q V +V +E K L E + VL+FA K+ + + + L L G
Sbjct: 238 QAVYWVTEERKRELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDG 285
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 261 (96.9 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 66/187 (35%), Positives = 100/187 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GGV + I+KGC+++ TPGRL+DM+ + V L R+L LDEADRM+D
Sbjct: 287 VRPVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGKVGLSKVRHLVLDEADRMLD 346
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSAL-VKPITINVGRAGAASM 127
MGFE D+R + + +RQTL+FSAT P+ IQ A L V + + VG G A
Sbjct: 347 MGFEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGACT 406
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT-EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSL 186
+V Q V + K LL+ L+ ++F E K+ D I +L + P ++
Sbjct: 407 DVEQTFLQVTKFNKREQLLDLLRTIGSERTMVFVETKRQADFIAAFLCQEKVPTTSIHGD 466
Query: 187 KEDQNNQ 193
+E + +
Sbjct: 467 REQRERE 473
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 162 (62.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 14 RTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDM 73
R +GG + + I +GC +++ATPGRL+D L+++ L+ C Y+ LDEADRM+DM
Sbjct: 419 RVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDM 478
Query: 74 GFEEDV 79
GFE V
Sbjct: 479 GFEPQV 484
Score = 127 (49.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 90 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLECL 149
R T +FSATMP ++ AR L P+ + +G AG + + Q V +K+ K L + L
Sbjct: 512 RTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLL 571
Query: 150 QKT-EPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK-EDQNNQTLE 196
+ E ++F K++ D+I + L G TL K ++Q +LE
Sbjct: 572 DELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLE 620
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 264 (98.0 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 60/175 (34%), Positives = 95/175 (54%)
Query: 8 ALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCL 64
A P+ L+ GGV +++ + +K+G ++V TPGR++D+L K+ +L YL L
Sbjct: 401 AKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVL 460
Query: 65 DEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGA 124
DEADRM D GFE + + + R +QT+LFSAT P+ ++ AR L KP+ I VG
Sbjct: 461 DEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSV 520
Query: 125 ASMNVVQEVEYVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKG 177
++ Q + K + LLE L E ++F +K++ D I + L+ G
Sbjct: 521 VCSDITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTG 575
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 254 (94.5 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 61/159 (38%), Positives = 91/159 (57%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+T + GGV +D I+ G ++VATPGRL+D+++ ++ LDEAD M+D
Sbjct: 104 LKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLD 163
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV-Q 131
MGF +DV++I S RQTLLFSATMP +I+ A + L P I + A ++++V Q
Sbjct: 164 MGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEAILTDPTKIQI-TAETVTIDLVNQ 222
Query: 132 EVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAI 169
V ++ + K+ L L K + VLIF + K D I
Sbjct: 223 SVYHLDKSNKVPLLFNILTKADYEKVLIFCKTKYGADII 261
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 256 (95.2 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 58/168 (34%), Positives = 92/168 (54%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PL++ + GGV +N + + KG ++VATPGRLMD+ ++ V D L LDEADRM
Sbjct: 100 LPLKSAVVFGGVKINPQMQRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRM 159
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF D+ I +RQ LLFSAT +I+ A+ + P+ I+V A + + V
Sbjct: 160 LDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVE 219
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
Q + + K L++ +++ VL+F K + + YL +G
Sbjct: 220 QCIYPADVKKKPDMLVKLVKEGNWQQVLVFMRTKHGANRLATYLNEQG 267
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 256 (95.2 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 58/168 (34%), Positives = 92/168 (54%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PL++ + GGV +N + + KG ++VATPGRLMD+ ++ V D L LDEADRM
Sbjct: 100 LPLKSAVVFGGVKINPQMQRMCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRM 159
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF D+ I +RQ LLFSAT +I+ A+ + P+ I+V A + + V
Sbjct: 160 LDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVE 219
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
Q + + K L++ +++ VL+F K + + YL +G
Sbjct: 220 QCIYPADVKKKPDMLVKLVKEGNWQQVLVFMRTKHGANRLATYLNEQG 267
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 261 (96.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 65/168 (38%), Positives = 96/168 (57%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 379 VRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLD 438
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTLLFSAT P++IQ A L + + VG+ G A
Sbjct: 439 MGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACR 498
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYL 173
+V Q + V K L+E L+ E P ++F E K+ D I +L
Sbjct: 499 DVQQSILQVGPVFKKRKLVEILRNIGDERP-MVFVETKKKADFIATFL 545
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 261 (96.9 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 65/168 (38%), Positives = 96/168 (57%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 379 VRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLD 438
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTLLFSAT P++IQ A L + + VG+ G A
Sbjct: 439 MGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACR 498
Query: 128 NVVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYL 173
+V Q + V K L+E L+ E P ++F E K+ D I +L
Sbjct: 499 DVQQSILQVGPVFKKRKLVEILRNIGDERP-MVFVETKKKADFIATFL 545
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 261 (96.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 68/188 (36%), Positives = 105/188 (55%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCR--YLCLDEADRMVDM 73
C GG QS ++ +G M+V TPGR++D++ KM + + R +L DEADRM DM
Sbjct: 371 CAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLV--KMGATNFLRTTFLVFDEADRMFDM 428
Query: 74 GFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEV 133
GFE V++I R RQ L+FSAT +K++ AR ALV P+ I G G A+ ++ Q+V
Sbjct: 429 GFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANADIEQKV 488
Query: 134 EYVK-QEAKIVYLLECLQKTEP--PVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS--LKE 188
++ Q+ K+ +L+ L + VLIF KK D + + + L +K L L+
Sbjct: 489 FVMQNQDVKLHWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQA 548
Query: 189 DQNNQTLE 196
++N L+
Sbjct: 549 ERNENLLK 556
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 260 (96.6 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 68/165 (41%), Positives = 92/165 (55%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGF 75
C GG QS +++G ++VATPGR++DM+ K +L +L LDEADRM MGF
Sbjct: 375 CCYGGGSKWEQS-KALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGF 433
Query: 76 EEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEY 135
E VR+I + R RQ L+FSAT K+I+ AR L P+ I G A+ ++ Q V Y
Sbjct: 434 EPQVRSICNHVRPDRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDITQSV-Y 492
Query: 136 VKQEA--KIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLK 176
V K +LL L K +E VLIF KK D + + LL+K
Sbjct: 493 VFPNPLQKWNWLLCHLVKFLSEGSVLIFVTKKVDAETVSNNLLIK 537
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 257 (95.5 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 60/162 (37%), Positives = 91/162 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+RT L +GG+P+ L +K +++ TPGRL+++L +K V LD R + +DEAD M+
Sbjct: 272 MRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLK 331
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF++ V I QTLL SAT+P Q A P+TI +G+ NV Q
Sbjct: 332 MGFQQQVLDILEQVPEDHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKNQPCANVRQI 391
Query: 133 VEYVKQEAKIVYLLECL--QKT-EPPVLIFAEKKQDVDAIHE 171
V +V++ +K L E L +K +PPV++F + K D + E
Sbjct: 392 VLWVEEPSKKKKLFEILNDEKLYQPPVVVFVDCKLGADLLCE 433
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 261 (96.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 58/166 (34%), Positives = 93/166 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
LRT GG +++ + +K+G ++V TPGR++D+L ++++ +L +L LDEADR
Sbjct: 611 LRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADR 670
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M DMGF + I R RQT++FSAT P K++N A+ L KP+ I G S ++
Sbjct: 671 MFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDI 730
Query: 130 VQEVEYVKQEAKIVYLLECLQ--KTEPPVLIFAEKKQDVDAIHEYL 173
Q VE E + L+E L + +LIF +++ D ++ L
Sbjct: 731 EQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQETTDNLYRQL 776
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 249 (92.7 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 56/166 (33%), Positives = 92/166 (55%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++T GGV +N + ++ G ++VATPGRL+D++ + LD + L LDEADRM+
Sbjct: 116 IKTLAVFGGVSVNIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLS 175
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GF E++ + + ++QTLLFSAT P+++ + L PI I + A A+++ VQ
Sbjct: 176 LGFTEELTALLALTPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADASTL--VQR 233
Query: 133 VEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
V V + K L +Q+ + LIF K + + E L +G
Sbjct: 234 VFTVNKGEKTAVLAHLIQQEQWRQALIFVNAKHHCEHLAEKLAKRG 279
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 247 (92.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 55/164 (33%), Positives = 88/164 (53%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PL+ + GGV + ++ +++G ++VATPGRL+D++++ +++L + LDEADRM
Sbjct: 113 LPLKATVVHGGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRM 172
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF D+R I RQ LLFSAT K+I+ L P I V R A+ +
Sbjct: 173 LDMGFLPDIRRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARIT 232
Query: 131 QEVEYVKQEAKIVYLLECL-QKTEPPVLIFAEKKQDVDAIHEYL 173
V V ++ K L + K VL+F K + + + L
Sbjct: 233 HVVHPVDRQRKRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQL 276
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 247 (92.0 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 55/164 (33%), Positives = 88/164 (53%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PL+ + GGV + ++ +++G ++VATPGRL+D++++ +++L + LDEADRM
Sbjct: 113 LPLKATVVHGGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRM 172
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF D+R I RQ LLFSAT K+I+ L P I V R A+ +
Sbjct: 173 LDMGFLPDIRRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARIT 232
Query: 131 QEVEYVKQEAKIVYLLECL-QKTEPPVLIFAEKKQDVDAIHEYL 173
V V ++ K L + K VL+F K + + + L
Sbjct: 233 HVVHPVDRQRKRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQL 276
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 250 (93.1 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 58/143 (40%), Positives = 87/143 (60%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R + GG + S+ I +GC+++ ATPGRLMD++ K+ + L +YL LDEADRM+D
Sbjct: 374 VRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLD 433
Query: 73 MGFEEDVRTIFSF----FRGQRQTLLFSATMPKKIQNFARSALVKP-ITINVGRAGAASM 127
MGF +++ + S + QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 434 MGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACR 493
Query: 128 NVVQEVEYVKQEAKIVYLLECLQ 150
+V Q V V Q +K L+E L+
Sbjct: 494 DVQQTVLQVGQFSKREKLVEILR 516
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 246 (91.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 55/158 (34%), Positives = 88/158 (55%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R +A GGV + V G +++ATPGRL+D L + ++L+ L DEADRM+D
Sbjct: 104 IRVGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLD 163
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF ++++ + QRQTLLFSAT+ I +F+++ L P I V + + + Q
Sbjct: 164 MGFMDEIQAVLKQVPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQR 223
Query: 133 VEYVKQEAKIVYLLECLQ-KTEPPVLIFAEKKQDVDAI 169
V + + K ++ ++ K VLIF+ KQ VD +
Sbjct: 224 VYAIDSDRKTEFVSHLVRSKNWQQVLIFSRTKQGVDKL 261
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 246 (91.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 55/158 (34%), Positives = 88/158 (55%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
+R +A GGV + V G +++ATPGRL+D L + ++L+ L DEADRM+D
Sbjct: 104 IRVGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLD 163
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF ++++ + QRQTLLFSAT+ I +F+++ L P I V + + + Q
Sbjct: 164 MGFMDEIQAVLKQVPAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQR 223
Query: 133 VEYVKQEAKIVYLLECLQ-KTEPPVLIFAEKKQDVDAI 169
V + + K ++ ++ K VLIF+ KQ VD +
Sbjct: 224 VYAIDSDRKTEFVSHLVRSKNWQQVLIFSRTKQGVDKL 261
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 248 (92.4 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 59/168 (35%), Positives = 88/168 (52%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PL GGV + +G ++VATPGRL+DM ++ + D L LDEADRM
Sbjct: 100 LPLTAMAMYGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRM 159
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF ED+ I QRQ LLFSAT+ K+++ A++A+ I I + R AAS +
Sbjct: 160 LDMGFIEDINNIIEKLPEQRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQID 219
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
Q + V ++ K L +++ LIF + K + L +G
Sbjct: 220 QWLTTVDKDRKSALLSHLIKENNWAQALIFIQTKHGAAKLVSQLEKRG 267
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 248 (92.4 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 59/168 (35%), Positives = 88/168 (52%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PL GGV + +G ++VATPGRL+DM ++ + D L LDEADRM
Sbjct: 100 LPLTAMAMYGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRM 159
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF ED+ I QRQ LLFSAT+ K+++ A++A+ I I + R AAS +
Sbjct: 160 LDMGFIEDINNIIEKLPEQRQNLLFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQID 219
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
Q + V ++ K L +++ LIF + K + L +G
Sbjct: 220 QWLTTVDKDRKSALLSHLIKENNWAQALIFIQTKHGAAKLVSQLEKRG 267
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 245 (91.3 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 58/149 (38%), Positives = 88/149 (59%)
Query: 54 VSLDVCRYLCLDEADRMVDMGFEEDVRTIFSFF----RGQRQTLLFSATMPKKIQNFARS 109
+ LD C+YL LDEADRM+DMGFE +R I +G R T++FSAT PK+IQ AR
Sbjct: 81 IGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARD 140
Query: 110 ALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLECLQKT--EPPVLIFAEKKQDVD 167
L + I + VGR G+ S N+ Q+V +V+ K +LL+ L T + L+F E K+ D
Sbjct: 141 FLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGAD 200
Query: 168 AIHEYLLLKGKPFFTLKSLKEDQNNQTLE 196
++ ++L +G + S+ D++ + E
Sbjct: 201 SLEDFLYHEG---YACTSIHGDRSQRDRE 226
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 247 (92.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 62/178 (34%), Positives = 90/178 (50%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG P D ++ H++VATPGRL+D L K VSLD L +DEADRM+DMGF + +
Sbjct: 108 GGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAI 167
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
+ F RQTLLFSAT P+ I + P+ I + A + Q+ +
Sbjct: 168 DDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPP-IEQQFYETSSK 226
Query: 140 AKIVYLLECLQKTEPP-VLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKEDQNNQTL 195
KI L L +P ++F K+D A+ + L G+ +L L++ +QTL
Sbjct: 227 GKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTL 284
>UNIPROTKB|J3QSF1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000579996
Uniprot:J3QSF1
Length = 153
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 55/142 (38%), Positives = 86/142 (60%)
Query: 33 KGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDVRTIFSFFRGQRQT 92
+G + +ATPGRL+D L+ +L YL LDEADRM+DMGFE +R I R RQT
Sbjct: 2 RGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQT 61
Query: 93 LLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEVEY---VKQEAKIVYLLE- 147
L++SAT PK+++ A L I IN+G +A+ N++Q V+ V+++ K++ L+E
Sbjct: 62 LMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEE 121
Query: 148 CLQKTEPPVLIFAEKKQDVDAI 169
+ + E ++F E K+ D +
Sbjct: 122 IMSEKENKTIVFVETKRRCDEL 143
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 253 (94.1 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 57/155 (36%), Positives = 88/155 (56%)
Query: 16 CLAI-GGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADRMV 71
C+ + GG + Q + +K+G ++V TPGR++D+L K+ +L YL +DEADRM
Sbjct: 500 CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMF 559
Query: 72 DMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQ 131
DMGFE + I R RQT+LFSAT P++++ AR L KP+ I VG + ++ Q
Sbjct: 560 DMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQ 619
Query: 132 EVEYVKQEAKIVYLLECLQK--TEPPVLIFAEKKQ 164
VE + + LLE L + + VL+F ++
Sbjct: 620 LVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQE 654
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 150 (57.9 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++ + GG + L + KG ++VATPGRL D+L+K + L + +L LDEADRM+D
Sbjct: 480 IKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLD 539
Query: 73 MGFEEDVRTI 82
MGF +R+I
Sbjct: 540 MGFSPQIRSI 549
Score = 130 (50.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 30/86 (34%), Positives = 50/86 (58%)
Query: 89 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLEC 148
+RQT++FSAT K+IQ A+ L K + VG+ G+ + + Q + +V++E K YLL
Sbjct: 580 KRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNL 639
Query: 149 LQKTEPPV-LIFAEKKQDVDAIHEYL 173
L + + ++F E K+ D I +L
Sbjct: 640 LAENNNGLTILFVETKRKADIIERFL 665
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 150 (57.9 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++ + GG + L + KG ++VATPGRL D+L+K + L + +L LDEADRM+D
Sbjct: 480 IKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLD 539
Query: 73 MGFEEDVRTI 82
MGF +R+I
Sbjct: 540 MGFSPQIRSI 549
Score = 130 (50.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 30/86 (34%), Positives = 50/86 (58%)
Query: 89 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQEAKIVYLLEC 148
+RQT++FSAT K+IQ A+ L K + VG+ G+ + + Q + +V++E K YLL
Sbjct: 580 KRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNL 639
Query: 149 LQKTEPPV-LIFAEKKQDVDAIHEYL 173
L + + ++F E K+ D I +L
Sbjct: 640 LAENNNGLTILFVETKRKADIIERFL 665
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 246 (91.7 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 58/174 (33%), Positives = 97/174 (55%)
Query: 10 PIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADR 69
P L++ GG + I+ G +++ TPGRL D+++ ++ L ++ LDEADR
Sbjct: 217 PCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADR 276
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSAL-VKPITINVGRAG-AASM 127
M+DMGFEE VR I S RQ ++FSAT P + A+ + PI + +G AA+
Sbjct: 277 MLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANH 336
Query: 128 NVVQEVEYVKQEAK---IVYLLECLQKTEPP-VLIFAEKKQDVDAIHEYLLLKG 177
+V+Q +E + + A+ ++ LLE K++ VL+FA K + + + +L +G
Sbjct: 337 DVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRG 390
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 243 (90.6 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 58/161 (36%), Positives = 85/161 (52%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GGV + +K+G ++VATPGRL++ L +SL +L LDEADRM+DMGF D+
Sbjct: 110 GGVKVETQAQKLKRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADI 169
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
+ I +RQ LLFSAT ++ A ++KP I+ + + V Q V V+Q
Sbjct: 170 QKILQAVNKKRQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQR 229
Query: 140 AKIVYLLECL-QKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
K L E + +K VL+F + D + + L L G P
Sbjct: 230 RKRELLSELIGKKNWQQVLVFTATRDAADTLVKELNLDGIP 270
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 246 (91.7 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 59/169 (34%), Positives = 94/169 (55%)
Query: 6 ISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLD 65
+S LP ++T L +GG+P+ L +++ +++ATPGRL+D++ + VSL + + +D
Sbjct: 295 MSGLP-RMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVSLSGIKIVVVD 353
Query: 66 EADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAA 125
EAD M+ MGF++ V + G QT+L SAT+P I+ L P+ I G
Sbjct: 354 EADTMLKMGFQQQVLDVLEHTPGDCQTILVSATIPDSIEQLTDQLLHNPVRIITGDKNLP 413
Query: 126 SMNVVQEVEYVKQEAKIVYLLECL--QKT-EPPVLIFAEKKQDVDAIHE 171
+V Q + +V+ AK L E L QK +PPVL+F + K D + E
Sbjct: 414 CASVRQIILWVEDPAKKKKLFEILNDQKLFKPPVLVFVDCKLGADLLSE 462
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 246 (91.7 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 62/186 (33%), Positives = 98/186 (52%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGF 75
C+ GG ++V+ KG +++ATPGRL D+ ++L YL +EADRM+DMGF
Sbjct: 346 CI-YGGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGF 403
Query: 76 EEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV-QEVE 134
E + I R RQT++ SAT P ++ A+S L P+ + VG A++N V Q+V
Sbjct: 404 EPQIMKILIDVRPDRQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVI 463
Query: 135 YVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED-QN 191
+ +E K ++ + +P +IF KK D I L ++G P +L +E
Sbjct: 464 VINEEEKKAFMENFIDSMKPKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDR 523
Query: 192 NQTLEN 197
Q L++
Sbjct: 524 EQALDD 529
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 243 (90.6 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 61/192 (31%), Positives = 104/192 (54%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+ ++ GGV ++ + +K ++VATPGRL D+ + + L +YL LDEADRM
Sbjct: 173 VDIQVACIFGGVKKDEQREALKSAA-VVVATPGRLKDLQNDGSLDLGRVKYLVLDEADRM 231
Query: 71 VDMGFEEDVRTIFSFFR-GQRQTLLFSATMPKKIQNFARSALVKPITINVG-------RA 122
+D GFE+D++ I S +RQT++F+AT P ++N A + + P+T+ +G RA
Sbjct: 232 LDKGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGGDPSADPRA 291
Query: 123 GAASMNVVQEVEYVKQEAKIVYLLECLQKTEPP-VLIFAEKKQDVDAIHEYLLLKGKPFF 181
+ VV+ V+ ++E ++V +L Q+ P VL F K++ + L KG F
Sbjct: 292 NSRIKQVVEVVKPHEKEQRLVQILNRHQRGTPDKVLAFCLYKKEAMRVERLLRTKG---F 348
Query: 182 TLKSLKEDQNNQ 193
+ + D + Q
Sbjct: 349 KVAGIHGDLSQQ 360
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 244 (91.0 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 61/181 (33%), Positives = 94/181 (51%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGF 75
C+ GG Q D++K G +++ATPGRL D+ V+L YL LDEAD+M+D+GF
Sbjct: 321 CIYGGGNRKGQIQDIMK-GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGF 379
Query: 76 EEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV-QEVE 134
E + I R RQT++ SAT P I+ A S L +P+ + VG +++ V Q +
Sbjct: 380 EHQIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNII 439
Query: 135 YVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
+E K E LQ P V++F +K D + L ++G P +L +E +
Sbjct: 440 ITTEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDR 499
Query: 193 Q 193
+
Sbjct: 500 E 500
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 247 (92.0 bits), Expect = 9.0e-20, P = 9.0e-20
Identities = 62/173 (35%), Positives = 95/173 (54%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ G + Q+ D + +G +++ATPGRL+D L+ + +L C YL LDEADRM+DMG
Sbjct: 344 TCIFGGSSKVPQARD-LDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMG 402
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQ +++SAT PK++Q A L I IN+G +A+ N+ Q V
Sbjct: 403 FEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIV 462
Query: 134 EYVKQEAKIVYLLECLQKTEP---------PVLIFAEKKQDVDAIHEYLLLKG 177
E + K L+ L + P +++F E K V+ I + + +G
Sbjct: 463 EICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEG 515
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 244 (91.0 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 61/181 (33%), Positives = 94/181 (51%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGF 75
C+ GG Q D++K G +++ATPGRL D+ V+L YL LDEAD+M+D+GF
Sbjct: 330 CIYGGGNRKGQIQDIMK-GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGF 388
Query: 76 EEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV-QEVE 134
E + I R RQT++ SAT P I+ A S L +P+ + VG +++ V Q +
Sbjct: 389 EHQIMKILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNII 448
Query: 135 YVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNN 192
+E K E LQ P V++F +K D + L ++G P +L +E +
Sbjct: 449 ITTEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDR 508
Query: 193 Q 193
+
Sbjct: 509 E 509
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 243 (90.6 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 63/193 (32%), Positives = 101/193 (52%)
Query: 6 ISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLD 65
+S LP ++T L +GG+P+ L +++ +++ATPGRL+D++ + V L + + +D
Sbjct: 296 MSGLP-RMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVD 354
Query: 66 EADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAA 125
EAD M+ MGF++ V I QT+L SAT+P I+ A L P+ I G
Sbjct: 355 EADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLP 414
Query: 126 SMNVVQEVEYVKQEAKIVYLLECLQKTE---PPVLIFAEKKQDVDAIHEYLL----LKGK 178
+V Q + +V++ AK L E L + PPVL+F + K D + E + LK
Sbjct: 415 CSSVRQIILWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSV 474
Query: 179 PFFTLKSLKEDQN 191
+ KS E +N
Sbjct: 475 SIHSEKSQTERKN 487
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 244 (91.0 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 61/189 (32%), Positives = 100/189 (52%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR+ GG ++ ++ +KKG +++ATPGRL D+ V+L YL LDEAD+M+D
Sbjct: 344 LRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLD 403
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV-Q 131
MGFE + I R RQT++ SAT P + A+S L +P+ + VG +++ V Q
Sbjct: 404 MGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQ 463
Query: 132 EVEYVKQEAKIVYLLECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKED 189
+ +E K ++ LQ + V++F +K D + L+L +L +E
Sbjct: 464 NIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQ 523
Query: 190 QNNQ-TLEN 197
++ + LEN
Sbjct: 524 RDREKALEN 532
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 243 (90.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 63/186 (33%), Positives = 98/186 (52%)
Query: 16 CLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGF 75
C+ GG Q DV K G +++ATPGRL D+ V+L YL LDEAD+M+D+GF
Sbjct: 307 CIYGGGNRKGQIQDVTK-GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGF 365
Query: 76 EEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV-QEVE 134
E + I R RQT++ +A+ P + A+S L +P+ + VG ++N V Q +
Sbjct: 366 EHQIMKILLDVRPDRQTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNII 425
Query: 135 YVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQN- 191
+E K + E LQ P V++F +K D + L ++G P +L +E +
Sbjct: 426 VTTEEEKRSLVKEFLQSLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDR 485
Query: 192 NQTLEN 197
+Q LE+
Sbjct: 486 DQALED 491
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 243 (90.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 63/193 (32%), Positives = 101/193 (52%)
Query: 6 ISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLD 65
+S LP ++T L +GG+P+ L +++ +++ATPGRL+D++ + V L + + +D
Sbjct: 296 MSGLP-RMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVD 354
Query: 66 EADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAA 125
EAD M+ MGF++ V I QT+L SAT+P I+ A L P+ I G
Sbjct: 355 EADTMLKMGFQQQVLDILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLP 414
Query: 126 SMNVVQEVEYVKQEAKIVYLLECLQKTE---PPVLIFAEKKQDVDAIHEYLL----LKGK 178
+V Q + +V++ AK L E L + PPVL+F + K D + E + LK
Sbjct: 415 CSSVRQIILWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSV 474
Query: 179 PFFTLKSLKEDQN 191
+ KS E +N
Sbjct: 475 SIHSEKSQTERKN 487
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 51/121 (42%), Positives = 74/121 (61%)
Query: 15 TCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMG 74
TC+ GG P + +++G + +ATPGRL+D L+ +L YL LDEADRM+DMG
Sbjct: 37 TCI-YGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 95
Query: 75 FEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEV 133
FE +R I R RQTL++SAT PK+++ A L I IN+G +A+ N++Q V
Sbjct: 96 FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIV 155
Query: 134 E 134
+
Sbjct: 156 D 156
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 241 (89.9 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 58/169 (34%), Positives = 91/169 (53%)
Query: 6 ISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLD 65
+S LP ++T L +GG+P+ L +++ +++ATPGRL+D++ + V L + + +D
Sbjct: 295 MSGLP-RMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVD 353
Query: 66 EADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAA 125
EAD M+ MGF++ V I QT+L SAT+P I+ A L P+ I G
Sbjct: 354 EADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLP 413
Query: 126 SMNVVQEVEYVKQEAKIVYLLECLQKTE---PPVLIFAEKKQDVDAIHE 171
NV Q + +V+ AK L E L + PPVL+F + K D + E
Sbjct: 414 CANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSE 462
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 240 (89.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG +N+ + +KK H++V TPGR++D +++K + L + LDEAD M++MGF ED+
Sbjct: 106 GGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDI 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I + QTLLFSATMP I+ A + +P I V N+ Q V+++
Sbjct: 166 EAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEK 225
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 226 KKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRG 264
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG +N+ + +KK H++V TPGR++D +++K + L + LDEAD M++MGF ED+
Sbjct: 106 GGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDI 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I + QTLLFSATMP I+ A + +P I V N+ Q V+++
Sbjct: 166 EAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEK 225
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 226 KKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRG 264
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG +N+ + +KK H++V TPGR++D +++K + L + LDEAD M++MGF ED+
Sbjct: 106 GGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDI 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I + QTLLFSATMP I+ A + +P I V N+ Q V+++
Sbjct: 166 EAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEK 225
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 226 KKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRG 264
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG +N+ + +KK H++V TPGR++D +++K + L + LDEAD M++MGF ED+
Sbjct: 106 GGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDI 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I + QTLLFSATMP I+ A + +P I V N+ Q V+++
Sbjct: 166 EAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEK 225
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 226 KKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRG 264
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG +N+ + +KK H++V TPGR++D +++K + L + LDEAD M++MGF ED+
Sbjct: 106 GGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDI 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I + QTLLFSATMP I+ A + +P I V N+ Q V+++
Sbjct: 166 EAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEK 225
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 226 KKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRG 264
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG +N+ + +KK H++V TPGR++D +++K + L + LDEAD M++MGF ED+
Sbjct: 106 GGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDI 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I + QTLLFSATMP I+ A + +P I V N+ Q V+++
Sbjct: 166 EAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEK 225
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 226 KKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRG 264
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 240 (89.5 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 56/159 (35%), Positives = 86/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG +N+ + +KK H++V TPGR++D +++K + L + LDEAD M++MGF ED+
Sbjct: 106 GGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDI 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I + QTLLFSATMP I+ A + +P I V N+ Q V+++
Sbjct: 166 EAILTDVPETHQTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEK 225
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 226 KKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALNLRG 264
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 239 (89.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 55/159 (34%), Positives = 84/159 (52%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG + + + +KK H++V TPGRL+D ++++ + L + LDEAD M++MGF ED+
Sbjct: 107 GGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDI 166
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
+I S + QTLLFSATMP I+ A + P + V N+ Q V +
Sbjct: 167 ESILSNVPAEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHER 226
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 227 KKFDTLTRLLDIQSPELAIVFGRTKRRVDELTEALNLRG 265
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 241 (89.9 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 58/169 (34%), Positives = 91/169 (53%)
Query: 6 ISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLD 65
+S LP ++T L +GG+P+ L +++ +++ATPGRL+D++ + V L + + +D
Sbjct: 295 MSGLP-RMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVD 353
Query: 66 EADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAA 125
EAD M+ MGF++ V I QT+L SAT+P I+ A L P+ I G
Sbjct: 354 EADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLP 413
Query: 126 SMNVVQEVEYVKQEAKIVYLLECLQKTE---PPVLIFAEKKQDVDAIHE 171
NV Q + +V+ AK L E L + PPVL+F + K D + E
Sbjct: 414 CANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSE 462
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 231 (86.4 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 54/168 (32%), Positives = 89/168 (52%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LRT L +GG M+ + + +++ TPGRLM ++ + + L Y+ DEADR+ +
Sbjct: 177 LRTALILGGDSMDDQFAALHENPDIIIGTPGRLMHVIQEMNLKLQSVEYVVFDEADRLFE 236
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF E ++ I RQTLLFSAT+PK I FAR+ L +P+ I + S +
Sbjct: 237 MGFAEQLQEIIRRLPDARQTLLFSATLPKLIVEFARAGLTEPVLIRLDVDTKLSEQLKLS 296
Query: 133 VEYVKQEAK---IVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
++ + K +++LL + K + ++F K V+ + E L +G
Sbjct: 297 FFSLRLDDKPALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLSAEG 344
Score = 38 (18.4 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 167 DAIHEYLLLKGKPFFTLKSLKEDQNNQ 193
+A +YL K +P + +S+K +N Q
Sbjct: 492 NAYKQYL--KSRPVPSAESIKRSRNTQ 516
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 240 (89.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 61/194 (31%), Positives = 101/194 (52%)
Query: 6 ISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLD 65
+ LP +RT L +GG+P L +++ +++ATPGRL+D++ + V L + + +D
Sbjct: 283 MGGLP-RMRTALLVGGLPAPPQLHRLRQRVQVIIATPGRLLDIMKQSSVDLGNIKIVVVD 341
Query: 66 EADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAA 125
EAD M+ MGF+E V + QT+L SAT+P +I+ A L P+ + G
Sbjct: 342 EADTMLKMGFQEQVLDVLENVPQDCQTILVSATIPTRIEQLASRLLHDPVRVLAGEKNLP 401
Query: 126 SMNVVQEVEYVKQEAKIVYLLECLQKTE---PPVLIFAEKKQDVDAIHEYL-LLKGKPFF 181
+V Q V +V++ AK L E L + PPVL+F + K D + E + + G
Sbjct: 402 CPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVEKITGLKST 461
Query: 182 TLKSLKEDQNNQTL 195
++ S K +T+
Sbjct: 462 SMHSEKSQIERKTI 475
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 237 (88.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 59/181 (32%), Positives = 94/181 (51%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GGVPM + ++ G H++V TPGR++D LD+ + L L LDEADRM++MGF+ +
Sbjct: 106 GGVPMGPQIGSLEHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQL 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYV--- 136
I +RQTLLFSAT P++IQ+ A+ + P+ + A N +++ Y
Sbjct: 166 DAIIEQSPRERQTLLFSATFPEQIQSIAKQIMYNPVMVKA--AVTHEKNTIEQHFYQLDD 223
Query: 137 -KQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKEDQNNQT 194
K + + LL K E V +F K++ + + L G L L++ ++T
Sbjct: 224 DKSRMQALQLLLLEHKPESAV-VFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDET 282
Query: 195 L 195
L
Sbjct: 283 L 283
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 237 (88.5 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 59/181 (32%), Positives = 94/181 (51%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GGVPM + ++ G H++V TPGR++D LD+ + L L LDEADRM++MGF+ +
Sbjct: 106 GGVPMGPQIGSLEHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQL 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYV--- 136
I +RQTLLFSAT P++IQ+ A+ + P+ + A N +++ Y
Sbjct: 166 DAIIEQSPRERQTLLFSATFPEQIQSIAKQIMYNPVMVKA--AVTHEKNTIEQHFYQLDD 223
Query: 137 -KQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKEDQNNQT 194
K + + LL K E V +F K++ + + L G L L++ ++T
Sbjct: 224 DKSRMQALQLLLLEHKPESAV-VFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDET 282
Query: 195 L 195
L
Sbjct: 283 L 283
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 240 (89.5 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 57/169 (33%), Positives = 91/169 (53%)
Query: 6 ISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLD 65
+S LP LRT L +GG+P +++ +++ATPGRL+D++ ++ V L + + +D
Sbjct: 296 MSGLPC-LRTALLVGGLPAPPQRHRLRQRIQVIIATPGRLLDIIKQRSVELGSIKIVVVD 354
Query: 66 EADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAA 125
EAD M+ MGF++ V + QT+L SAT+P ++ A L P+ I G
Sbjct: 355 EADTMLKMGFQQQVLDVLEQLPHDCQTVLASATIPASVEQLACQLLRDPVAITAGERNLP 414
Query: 126 SMNVVQEVEYVKQEAKIVYLLECLQKTE---PPVLIFAEKKQDVDAIHE 171
+V Q V +V++ AK L E L + PPVL+F + K D + E
Sbjct: 415 CPSVRQIVLWVEEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSE 463
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 238 (88.8 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 62/190 (32%), Positives = 102/190 (53%)
Query: 6 ISALPIPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLD 65
++ LP +RT L +GG+P+ L +K+ +++ATPGRL+++L + V L + + +D
Sbjct: 301 MAGLP-NMRTVLLVGGLPLPPQLHRLKQSVKVIIATPGRLLEILRQSSVQLHGIKIVVVD 359
Query: 66 EADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAA 125
E D M+ MGF++ V I QT+L SAT+P I++ A L + I +G
Sbjct: 360 EVDTMLKMGFQQQVLDILEDISHDHQTILVSATIPVGIEHLANQLLHNFVRITIGEKNLP 419
Query: 126 SMNVVQEVEYVKQEAKIVYLLECLQKTE---PPVLIFAEKK--QDV--DAIHEYLLLKGK 178
NV Q + +V++ +K L E L + PPVL+F + K D+ DA+H+ L+
Sbjct: 420 CSNVRQIILWVEEPSKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSDAVHKITGLQCT 479
Query: 179 PFFTLKSLKE 188
+ KS E
Sbjct: 480 SMHSEKSQVE 489
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 235 (87.8 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 51/166 (30%), Positives = 91/166 (54%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L + + GGV +N + +++G ++VATPGRL+D+ +++ V LDEADRM+D
Sbjct: 109 LHSMVVFGGVKINPQIARLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLD 168
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF D++ + + RQ LLFSAT +I+ A+ + P+ I+V + + V Q
Sbjct: 169 MGFIRDIKKLMTALPKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQW 228
Query: 133 VEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
+ V ++ K L +++ VL+F + K + + ++L +G
Sbjct: 229 LTAVDKKRKPAVLTHLIKENNWQQVLVFTKTKHGANKLTKHLEAEG 274
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 235 (87.8 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 55/159 (34%), Positives = 86/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG + + + +KK H++V TPGR++D +++ + L+ + LDEAD M++MGF ED+
Sbjct: 106 GGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDI 165
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I S +RQTLLFSATMP I+ A + +P + V N+ Q V ++
Sbjct: 166 EAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEK 225
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 226 KKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALNLRG 264
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 238 (88.8 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 53/163 (32%), Positives = 95/163 (58%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+P+++ GGVP ++ +KKG ++VATPGRL+D L+ ++L C Y+ +DEADR+
Sbjct: 454 LPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLDFLENGNINLLKCIYVVIDEADRL 513
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARS-ALVKPITINVGRAG-AASMN 128
+DMGFE+ +R I + +Q L +AT P++++ A P+ I +G+ A+ N
Sbjct: 514 LDMGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKLAYDFCSYDPVKIQIGKNELTANKN 573
Query: 129 VVQEV---EYVKQEAKIV-YLLECLQKTEPPVLIFAEKKQDVD 167
+ Q V + + K++ +L E + + +LIF + K++ D
Sbjct: 574 IEQNVIISSSIDMKKKLLDWLKENYENNK--ILIFCDTKRNCD 614
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 233 (87.1 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 65/197 (32%), Positives = 97/197 (49%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+ L L IGGV + +I +G +++ATPGRL+D ++ + L + + +DEADRM
Sbjct: 100 LKLTKALLIGGVSFKEQDALIDRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRM 159
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+DMGF D+ IFS RQTL FSATM +I+ + L P I V R AS +
Sbjct: 160 LDMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETIE 219
Query: 131 QEVEYVK--------QEAKIVY--LLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPF 180
Q V K E + V L++ + +IF +K DVD + + L G
Sbjct: 220 QGVVLFKGSRRDREASEKRAVLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDA 279
Query: 181 FTLKS-LKEDQNNQTLE 196
+ L + Q +TL+
Sbjct: 280 APIHGDLDQSQRTRTLD 296
>UNIPROTKB|F1NTK9 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:AADN02043183 IPI:IPI00582285 ProteinModelPortal:F1NTK9
Ensembl:ENSGALT00000012108 Uniprot:F1NTK9
Length = 822
Score = 237 (88.5 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 52/168 (30%), Positives = 90/168 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+T L +GG M + + +++ATPGRL+ + + + L Y+ DEADR+ +
Sbjct: 134 LKTALVLGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFE 193
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF E ++ I + G QT+LFSAT+PK + FAR+ L +P+ I + S +
Sbjct: 194 MGFAEQLQEILARLPGSHQTVLFSATLPKLLVEFARAGLTEPMLIRLDVESKLSEQLKLA 253
Query: 133 VEYVKQEAK---IVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
+V+ + K +++LL C+ K + ++F K + + E L +G
Sbjct: 254 FFHVRGDDKPAVLLHLLRCVVKPQDQTVVFVATKHHTEYLKELLTSQG 301
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 235 (87.8 bits), Expect = 9.2e-19, P = 9.2e-19
Identities = 58/159 (36%), Positives = 90/159 (56%)
Query: 26 QSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDVRTIFSF 85
Q L+ + + + +ATPGR+ D L+ +L C YL LDEADRM+DMGFE +R I
Sbjct: 207 QRLEWLSQCVEICIATPGRI-DFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ 265
Query: 86 FRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEVEYV---KQEAK 141
R RQTL++SAT PK+++ A L INVG +A+ N++Q V+ +++ K
Sbjct: 266 IRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHK 325
Query: 142 IVYLLE-CLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKP 179
++ L+E + + E +IF E K+ D + + G P
Sbjct: 326 LIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWP 364
>SGD|S000002651 [details] [associations]
symbol:PRP28 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
complex" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
"U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
Uniprot:P23394
Length = 588
Score = 234 (87.4 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 55/160 (34%), Positives = 85/160 (53%)
Query: 19 IGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEED 78
+GG + + + +GC ++VATPGRL+D L+ ++ + L LDEAD+M+D+GFE+
Sbjct: 295 VGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQ 354
Query: 79 VRTIFSFF------RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
V I + RQTL+F+ATM I+ A + KP+ +G + + Q
Sbjct: 355 VTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQV 414
Query: 133 VEYV-KQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHE 171
VEY E K L + K +PP++IF KQ D + E
Sbjct: 415 VEYADNDEDKFKKLKPIVAKYDPPIIIFINYKQTADWLAE 454
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 231 (86.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 57/158 (36%), Positives = 85/158 (53%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG+PM + ++ G H++V TPGR++D L K + L L LDEADRM++MGF+E +
Sbjct: 109 GGMPMGPQIGSLEHGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEAL 168
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I + +RQTLLFSAT P I+ A+S + I V A + ++ Q V+
Sbjct: 169 EAIIAAAPAERQTLLFSATYPASIEQIAQSVTRNALMIKV-EATHDTSSIRQYFYKVEGS 227
Query: 140 AKIVYLLECLQKTEPPV--LIFAEKKQDV----DAIHE 171
A LE L P ++F K++V DA+H+
Sbjct: 228 AARDEALETLLLHHQPTSSVVFCNTKREVQNVADALHQ 265
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 223 (83.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 47/130 (36%), Positives = 74/130 (56%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML---DKKMVSLDVCRYLCLDEADR 69
+R+ GG M + + +K+G ++VATPGR +D+L D K++S ++ +DEADR
Sbjct: 360 IRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADR 419
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
+ D+GFE + I R +Q +LFSAT P K+++FA L PI+I + G + NV
Sbjct: 420 LFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSKGMVNENV 479
Query: 130 VQEVEYVKQE 139
Q+ E
Sbjct: 480 KQKFRICHSE 489
Score = 38 (18.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 177 GKPFFTLKSLKEDQNNQTLE 196
GK +KS +E+ N+ LE
Sbjct: 684 GKGLENIKSKREEAQNKDLE 703
>UNIPROTKB|F5H1N9 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC007215 HGNC:HGNC:18682 ChiTaRS:DDX47 IPI:IPI00792278
ProteinModelPortal:F5H1N9 SMR:F5H1N9 PRIDE:F5H1N9
Ensembl:ENST00000544400 ArrayExpress:F5H1N9 Bgee:F5H1N9
Uniprot:F5H1N9
Length = 196
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 50/112 (44%), Positives = 74/112 (66%)
Query: 6 ISALPIPLRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLC 63
I A+P+ L+ + +GG+ M+QSL + KK H+++ATPGRL+D L+ K +L +YL
Sbjct: 52 IEAIPLALQAVI-VGGIDSMSQSLALAKKP-HIIIATPGRLIDHLENTKGFNLRALKYLV 109
Query: 64 LDEADRMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPI 115
+DEADR+++M FE +V I R+T LFSATM KK+Q R+AL P+
Sbjct: 110 MDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPV 161
>DICTYBASE|DDB_G0274325 [details] [associations]
symbol:ddx52 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0274325 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0003723
EMBL:AAFI02000012 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14779 RefSeq:XP_643949.1
ProteinModelPortal:Q86IZ9 EnsemblProtists:DDB0234211 GeneID:8619377
KEGG:ddi:DDB_G0274325 OMA:NGITSHE Uniprot:Q86IZ9
Length = 668
Score = 233 (87.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 51/169 (30%), Positives = 96/169 (56%)
Query: 12 PLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMV 71
P R C+ + + + + K +++ TP RL+ ++ + ++SL+ YL DEAD++
Sbjct: 296 PFRICVLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKENLLSLNKVEYLVFDEADKLF 355
Query: 72 DMGFEEDVRTIFSFFRGQRQTL-LFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
D F+E V + + + + + LFSATM ++++ S + PI I +G AA++ V
Sbjct: 356 DKNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIGEQNAAAITVD 415
Query: 131 QEVEYV-KQEAKIVYLLECLQK-TEPPVLIFAEKKQDVDAIHEYLLLKG 177
Q++ YV K+E K++ + + +QK EPP+LIF + K+ + + L+ G
Sbjct: 416 QKLIYVGKEEGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQELIFDG 464
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 230 (86.0 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 52/159 (32%), Positives = 87/159 (54%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG + + + +KK +++V TPGRL+D ++++ + L+ + +DEAD M++MGF +D+
Sbjct: 107 GGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDI 166
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
+I S + QTLLFSATMP I+ A + +P + V N+ Q V++
Sbjct: 167 ESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQER 226
Query: 140 AKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKG 177
K L L P + ++F K+ VD + E L L+G
Sbjct: 227 KKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRG 265
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 229 (85.7 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 53/160 (33%), Positives = 83/160 (51%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GGVP L ++ G H+++ TPGRL+D L + + L R L LDEADRM+DMGF++D+
Sbjct: 109 GGVPFGPQLGSLEHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDI 168
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
+ + +RQTLLFSAT P I + +P+ ++V +++V Y
Sbjct: 169 SALIAAAPPKRQTLLFSATYPDSIAAMSAGVQREPVEVSVDEVHGEG--AIEQVFYEVDS 226
Query: 140 AKIVYLLE-CLQKTEPP-VLIFAEKKQDVDAIHEYLLLKG 177
+ + +E L P LIF K + + L ++G
Sbjct: 227 GQRIEAVERILGHYRPESALIFCNTKLECQEVANALAVRG 266
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 229 (85.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 52/164 (31%), Positives = 94/164 (57%)
Query: 13 LRTCLAIGGVPM-NQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMV 71
++ G P Q L+ +K+ H++V TPGR++D ++K +SL+ +YL +DEAD M+
Sbjct: 101 IKAAAIYGKSPFARQKLE-LKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEML 159
Query: 72 DMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQ 131
+MGF + V I +R T+LFSAT+P+ ++ +R+ + P I + AG + +
Sbjct: 160 NMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEH 219
Query: 132 EVEYVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYL 173
+ V++E K+ LL+ + E P +IF +++VD ++ L
Sbjct: 220 TLFEVREEEKLS-LLKDVTTIENPDSCIIFCRTQENVDHVYRQL 262
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 229 (85.7 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 52/164 (31%), Positives = 94/164 (57%)
Query: 13 LRTCLAIGGVPM-NQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMV 71
++ G P Q L+ +K+ H++V TPGR++D ++K +SL+ +YL +DEAD M+
Sbjct: 101 IKAAAIYGKSPFARQKLE-LKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEML 159
Query: 72 DMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQ 131
+MGF + V I +R T+LFSAT+P+ ++ +R+ + P I + AG + +
Sbjct: 160 NMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEH 219
Query: 132 EVEYVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYL 173
+ V++E K+ LL+ + E P +IF +++VD ++ L
Sbjct: 220 TLFEVREEEKLS-LLKDVTTIENPDSCIIFCRTQENVDHVYRQL 262
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 227 (85.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 55/162 (33%), Positives = 86/162 (53%)
Query: 17 LAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFE 76
+A GGV + + +K G +++ATPGRL+D+L + VSL L DEADRM+DMGF+
Sbjct: 109 IAYGGVSTKKQISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFK 168
Query: 77 EDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYV 136
E++ I + +QTLLFSAT I +++ LV+P + + A+ +V Q V V
Sbjct: 169 EEIDQITQYLPKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGV 228
Query: 137 KQEAKIVYLLECL-QKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
+ K + + VL+F KQ D + + + G
Sbjct: 229 DADRKRELTSFLIGSRNWKQVLVFTRTKQCADDLAKEMTKDG 270
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 227 (85.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 55/162 (33%), Positives = 86/162 (53%)
Query: 17 LAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFE 76
+A GGV + + +K G +++ATPGRL+D+L + VSL L DEADRM+DMGF+
Sbjct: 109 IAYGGVSTKKQISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFK 168
Query: 77 EDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYV 136
E++ I + +QTLLFSAT I +++ LV+P + + A+ +V Q V V
Sbjct: 169 EEIDQITQYLPKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGV 228
Query: 137 KQEAKIVYLLECL-QKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
+ K + + VL+F KQ D + + + G
Sbjct: 229 DADRKRELTSFLIGSRNWKQVLVFTRTKQCADDLAKEMTKDG 270
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 231 (86.4 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 61/168 (36%), Positives = 91/168 (54%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEADRMV 71
LR + GG + I GC ++ ATPGRL+ +DK ++++L RY+ +DEAD M+
Sbjct: 241 LRPGVVYGGGNFMDQIRQIGLGCDILCATPGRLLHFMDKPELLNLQRVRYVVIDEADEML 300
Query: 72 DMGFEEDVRTIFSFFRGQRQT--LLFSATMPKKIQNFARSALVKP-ITINVGRAGAASMN 128
+EED++ I S ++ LLFSAT PKKI++ AR L + + + VGRAG+ N
Sbjct: 301 TADWEEDMKKIMSAGGAAQEIKYLLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSN 360
Query: 129 VVQEV-EYVKQEAKIVYLLECLQKTEPP--VLIFAEKKQDVDAIHEYL 173
++Q V E K L L + PP +IF K D + +YL
Sbjct: 361 IIQTVIETAPMNKKRA--LNDLINSMPPQRTIIFVNNKWTADELDDYL 406
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 229 (85.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 51/143 (35%), Positives = 84/143 (58%)
Query: 11 IPLRTCLAIGGVPM-NQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEAD 68
I ++ C+ +GG+ M Q L + KK H+++ATPGRL+D L+ K +L +YL +DEAD
Sbjct: 156 IGIKCCVVVGGMDMVAQGLQLAKKP-HIIIATPGRLVDHLENMKGFNLKAIKYLVMDEAD 214
Query: 69 RMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
R+++M FE ++ I +R+T LFSATM KK++ R++L P+ + V
Sbjct: 215 RILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQ 274
Query: 129 VVQEVEYVKQEAKIVYLLECLQK 151
+ Q ++ + K VYL+ L +
Sbjct: 275 LQQSYLFIPVKYKDVYLVHILNE 297
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 226 (84.6 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 60/168 (35%), Positives = 87/168 (51%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+ GG M L+ ++ G +++ATPGRL+D K + L L LDEADRM+D
Sbjct: 110 LKIVAVYGGTSMKVQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLD 169
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF D++ + RQTL FSAT KI+ A + PI + V + + + V Q
Sbjct: 170 MGFMPDLQRVLRRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQM 229
Query: 133 VEYVKQEAK---IVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
V V ++ K + YL+ K VL+F + +Q DA+ E L L G
Sbjct: 230 VYPVDKKRKRELLSYLIG--SKNWQQVLVFTKTRQGSDALAEELKLDG 275
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 226 (84.6 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 60/168 (35%), Positives = 87/168 (51%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+ GG M L+ ++ G +++ATPGRL+D K + L L LDEADRM+D
Sbjct: 110 LKIVAVYGGTSMKVQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLD 169
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF D++ + RQTL FSAT KI+ A + PI + V + + + V Q
Sbjct: 170 MGFMPDLQRVLRRLSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQM 229
Query: 133 VEYVKQEAK---IVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
V V ++ K + YL+ K VL+F + +Q DA+ E L L G
Sbjct: 230 VYPVDKKRKRELLSYLIG--SKNWQQVLVFTKTRQGSDALAEELKLDG 275
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 230 (86.0 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 57/178 (32%), Positives = 89/178 (50%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GG M Q L+ +K+G ++V TPGR+MD + + + L+ + L LDEAD M+ MGF +D+
Sbjct: 110 GGQSMQQQLNALKRGPQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDI 169
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I QRQ LFSATMP++I+ A L I++ + ++ Q V Q
Sbjct: 170 EWILEHTPPQRQLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQH 229
Query: 140 AKIVYLLECLQ-KTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKSLKEDQNNQTLE 196
K+ L+ L+ + ++IF + + E L +G + L D N Q E
Sbjct: 230 NKLEALVRVLEVENTEGIIIFVRTRNSCVELAEKLEARG---YASSPLHGDMNQQARE 284
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 231 (86.4 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 53/136 (38%), Positives = 79/136 (58%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD-MGFEED 78
GG+ + + I KGC ++V T GR+ + + LD CRYL LDEADRM+D MGF +
Sbjct: 411 GGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPE 470
Query: 79 VRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPIT-INVGRAGAASMNVVQEV 133
+ I ++ +RQT++FSAT P +Q AR L + T I + + GAA+ V+QE
Sbjct: 471 IEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEF 530
Query: 134 EYVKQEAKIVYLLECL 149
E + +K+ LL+ L
Sbjct: 531 ELCDRTSKVDKLLKLL 546
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 231 (86.4 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 53/136 (38%), Positives = 79/136 (58%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD-MGFEED 78
GG+ + + I KGC ++V T GR+ + + LD CRYL LDEADRM+D MGF +
Sbjct: 411 GGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPE 470
Query: 79 VRTIFSFFR----GQRQTLLFSATMPKKIQNFARSALVKPIT-INVGRAGAASMNVVQEV 133
+ I ++ +RQT++FSAT P +Q AR L + T I + + GAA+ V+QE
Sbjct: 471 IEQIINYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEF 530
Query: 134 EYVKQEAKIVYLLECL 149
E + +K+ LL+ L
Sbjct: 531 ELCDRTSKVDKLLKLL 546
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 228 (85.3 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 51/142 (35%), Positives = 81/142 (57%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEADR 69
I ++T + +GG+ M V+ K H+++ATPGRL+D ++ K +L +YL +DEADR
Sbjct: 174 IGVKTAVIVGGIDMMSQALVLAKKPHVVIATPGRLIDHMENTKGFNLRALKYLVMDEADR 233
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
+++M FE +V I R+T LFSATM KK+Q R+AL P+ +V A +
Sbjct: 234 ILNMDFESEVDKILKVIPRDRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDKL 293
Query: 130 VQEVEYVKQEAKIVYLLECLQK 151
Q ++ + K YL+ L +
Sbjct: 294 QQFYIFIPSKYKDCYLVSILNE 315
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 229 (85.7 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 55/166 (33%), Positives = 94/166 (56%)
Query: 20 GGVPM-NQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEED 78
GG P +Q L + ++ ++V TPGR++D ++ +SL +L +DEADR+++MGFE+
Sbjct: 248 GGAPRRSQQLQLSRRP-KIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQ 306
Query: 79 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQEVEYVK 137
+ IF+ R RQ L +SAT PKK+ +FA + PI + +G + A+ N+ Q+ + V
Sbjct: 307 IDGIFNSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVP 366
Query: 138 QEA-KIVYLLECLQKT-----EPPVLIFAEKKQDVDAIHEYLLLKG 177
+A K+ L++ L + + LIF K+ D + Y+ G
Sbjct: 367 TDADKVDALMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNG 412
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 228 (85.3 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 62/192 (32%), Positives = 98/192 (51%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEADR 69
+ L L IGGV + ++++G +++ATPGRLMD D+ K++ + V L +DEADR
Sbjct: 102 LKLTMALLIGGVSFKEQETLLQRGVDVLIATPGRLMDQFDRGKLLMMGV-ETLIIDEADR 160
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
M+DMGF D+ I + RQTLLFSAT P IQ A++ P I V R + +
Sbjct: 161 MLDMGFIPDIEKICAKLPANRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETI 220
Query: 130 VQEVEYVKQ---EAKIVYLLECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGKPFFTLKS 185
Q V + +A+ L ++ T ++F +K +VD + L G +
Sbjct: 221 SQFVVKLPTNDGKARRTALRRVIEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHG 280
Query: 186 -LKEDQNNQTLE 196
L + ++TL+
Sbjct: 281 DLPQSVRSETLQ 292
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 228 (85.3 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 62/186 (33%), Positives = 84/186 (45%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
LR GG +++G ++V TPGRLMD L +K + LD R LDEAD M++
Sbjct: 113 LRVATLYGGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLN 172
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF ED++ I Q LFSATMP I+ A L P I V A N+ Q
Sbjct: 173 MGFLEDIQWILDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQY 232
Query: 133 VEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKGKPFFTLKS-LKEDQ 190
V K+ L + E ++IF + D I E L G P L L + Q
Sbjct: 233 AWKVSGITKMTALERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQ 292
Query: 191 NNQTLE 196
+ ++
Sbjct: 293 RERCID 298
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 228 (85.3 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 52/170 (30%), Positives = 91/170 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
++ GG N + +++G +++ TPGRL D++ ++ + YL LDEADRM+D
Sbjct: 385 MKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLD 444
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAG-AASMNVVQ 131
MGFE +R + R RQT++ SAT P ++ A+S + PI + VG AA+ +V Q
Sbjct: 445 MGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQ 504
Query: 132 EVEYVKQEAK----IVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
++ ++ + I ++ + T+ ++IF +K D + L L G
Sbjct: 505 IIKLMEDDMDKFNTITSFVKNMSSTDK-IIIFCGRKVRADDLSSELTLDG 553
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 222 (83.2 bits), Expect = 6.6e-18, P = 6.6e-18
Identities = 54/159 (33%), Positives = 82/159 (51%)
Query: 20 GGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVDMGFEEDV 79
GGV + + G ++VATPGRL+DM ++++ D L LDEADRM+DMGF +D+
Sbjct: 114 GGVDAQEQKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDI 173
Query: 80 RTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVEYVKQE 139
I RQ LLFSATM ++++ A+ + KP+ I++G A+ + Q + V +
Sbjct: 174 NKIIERLPEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKA 233
Query: 140 AKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
K L + LIF E K + L +G
Sbjct: 234 NKSALLSHIITTQNWQQALIFIETKHGAAKLVSQLEKRG 272
>UNIPROTKB|E1BGI6 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0003723 GO:GO:0006396 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:DAAA02045421
IPI:IPI00690851 Ensembl:ENSBTAT00000029525 Uniprot:E1BGI6
Length = 877
Score = 229 (85.7 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 52/168 (30%), Positives = 86/168 (51%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+T L +GG M + + +++ATPGRL+ + + + L Y+ DEADR+ +
Sbjct: 195 LKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFE 254
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF E ++ I G QT+LFSAT+PK + FAR+ L +P+ I + + +
Sbjct: 255 MGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTS 314
Query: 133 VEYVKQEAKIVYLLECLQKTEPP---VLIFAEKKQDVDAIHEYLLLKG 177
V+++AK LL L+ P ++F K + + E L +G
Sbjct: 315 FFLVREDAKAAVLLHLLRNVVRPQDQTVVFVATKHHAEYLSELLATQG 362
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 223 (83.6 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 56/168 (33%), Positives = 86/168 (51%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PL+T GG MN +++G ++VATPGRL D++ + + L L +DEADRM
Sbjct: 99 LPLKTLAVYGGANMNPQRKGVEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRM 158
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+D+GF D+ + QT+LFSAT ++ + L +P +NV AS V
Sbjct: 159 LDLGFVRDIEKVKRLIAPVHQTMLFSATYSDAVKQLSHKMLNQPQWVNVAENTTAS-TVE 217
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
Q V V + K L E + + VL+FA K+ + + + L L G
Sbjct: 218 QLVYRVDKRRKAELLSELVGRNNWRQVLVFASTKECAEHLLQELTLDG 265
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 223 (83.6 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 56/168 (33%), Positives = 86/168 (51%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+PL+T GG MN +++G ++VATPGRL D++ + + L L +DEADRM
Sbjct: 99 LPLKTLAVYGGANMNPQRKGVEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRM 158
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVV 130
+D+GF D+ + QT+LFSAT ++ + L +P +NV AS V
Sbjct: 159 LDLGFVRDIEKVKRLIAPVHQTMLFSATYSDAVKQLSHKMLNQPQWVNVAENTTAS-TVE 217
Query: 131 QEVEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
Q V V + K L E + + VL+FA K+ + + + L L G
Sbjct: 218 QLVYRVDKRRKAELLSELVGRNNWRQVLVFASTKECAEHLLQELTLDG 265
>MGI|MGI:1919240 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1919240 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
GeneTree:ENSGT00550000075100 CTD:79039 HOVERGEN:HBG051333
EMBL:AF319547 EMBL:BC043699 IPI:IPI00875042 RefSeq:NP_082317.1
UniGene:Mm.24495 ProteinModelPortal:Q8K4L0 SMR:Q8K4L0 STRING:Q8K4L0
PhosphoSite:Q8K4L0 PaxDb:Q8K4L0 PRIDE:Q8K4L0
Ensembl:ENSMUST00000031598 GeneID:71990 KEGG:mmu:71990
UCSC:uc008zhq.1 NextBio:335150 Bgee:Q8K4L0 CleanEx:MM_DDX54
Genevestigator:Q8K4L0 Uniprot:Q8K4L0
Length = 874
Score = 228 (85.3 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 50/168 (29%), Positives = 90/168 (53%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+T L +GG M + + +++ATPGRL+ + + + L Y+ DEADR+ +
Sbjct: 194 LKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFE 253
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
MGF E ++ I G QT+LFSAT+PK + FAR+ L +P+ I + + +
Sbjct: 254 MGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTS 313
Query: 133 VEYVKQEAK---IVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKG 177
V+++ K ++YLL+ + + + ++F K + + E L+ +G
Sbjct: 314 FLLVREDTKAAVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQG 361
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 222 (83.2 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 53/143 (37%), Positives = 83/143 (58%)
Query: 11 IPLRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEAD 68
I +++ + +GG+ M+QSL + KK H+++ATPGRL+D L+ K +L +YL +DEAD
Sbjct: 119 IGVQSAVIVGGIDSMSQSLALAKKP-HIIIATPGRLIDHLENTKGFNLRALKYLVMDEAD 177
Query: 69 RMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
R+++M FE +V I R+T LFSATM KK+Q R+AL P+ V
Sbjct: 178 RILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEK 237
Query: 129 VVQEVEYVKQEAKIVYLLECLQK 151
+ Q ++ + K YL+ L +
Sbjct: 238 LQQYYIFIPSKFKDTYLVYILNE 260
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 222 (83.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 53/143 (37%), Positives = 83/143 (58%)
Query: 11 IPLRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEAD 68
I +++ + +GG+ M+QSL + KK H+++ATPGRL+D L+ K +L +YL +DEAD
Sbjct: 145 IGVQSAVIVGGIDSMSQSLALAKKP-HIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 203
Query: 69 RMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
R+++M FE +V I R+T LFSATM KK+Q R+AL P+ V
Sbjct: 204 RILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEK 263
Query: 129 VVQEVEYVKQEAKIVYLLECLQK 151
+ Q ++ + K YL+ L +
Sbjct: 264 LQQYYLFIPSKFKDTYLVYILNE 286
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 56/186 (30%), Positives = 105/186 (56%)
Query: 17 LAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML-DKKMVSLDVCRYLCLDEADRMVDMGF 75
LA+GG+ + Q + +K +++ATPGRL+D + + S+ + L +DEADRM++ GF
Sbjct: 233 LAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGF 292
Query: 76 EEDVRTIFSFF-RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVE 134
++++ I S + +RQTLLFSATM +IQ+ + +L KP+ I + + + ++Q+
Sbjct: 293 QDELTEILSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFV 352
Query: 135 YVKQ--EAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLK-SLKEDQN 191
+++ + K L + L+ V++F +K+ + L L G L +L ++Q
Sbjct: 353 RIRKRDQLKPALLYQLLKGVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQR 412
Query: 192 NQTLEN 197
Q ++N
Sbjct: 413 LQNVKN 418
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 224 (83.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 56/186 (30%), Positives = 105/186 (56%)
Query: 17 LAIGGVPMNQSLDVIKKGCHMMVATPGRLMDML-DKKMVSLDVCRYLCLDEADRMVDMGF 75
LA+GG+ + Q + +K +++ATPGRL+D + + S+ + L +DEADRM++ GF
Sbjct: 233 LAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGF 292
Query: 76 EEDVRTIFSFF-RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQEVE 134
++++ I S + +RQTLLFSATM +IQ+ + +L KP+ I + + + ++Q+
Sbjct: 293 QDELTEILSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQQFV 352
Query: 135 YVKQ--EAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGKPFFTLK-SLKEDQN 191
+++ + K L + L+ V++F +K+ + L L G L +L ++Q
Sbjct: 353 RIRKRDQLKPALLYQLLKGVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQR 412
Query: 192 NQTLEN 197
Q ++N
Sbjct: 413 LQNVKN 418
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 221 (82.9 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 55/151 (36%), Positives = 81/151 (53%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMD-MLDKKMVSLDVCRYLCLDEADR 69
I LR + +GG+ Q + K H++VATPGRL D M D K SL +YL LDEADR
Sbjct: 116 ISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADR 175
Query: 70 MVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNV 129
+++ FE+ + I +R+T LFSATM KK++ R+ L P+ I + +
Sbjct: 176 LLNEDFEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTL 235
Query: 130 VQEVEYVKQEAKIVYLLECLQKT-EPPVLIF 159
Q+ +V + K YL+ L + E +IF
Sbjct: 236 KQQYRFVAAKYKDCYLVYILSEMPESTSMIF 266
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 220 (82.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/143 (37%), Positives = 82/143 (57%)
Query: 11 IPLRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEAD 68
I ++ + +GG+ M+QSL + KK H+++ATPGRL+D L+ K +L +YL +DEAD
Sbjct: 119 IGVQCAVIVGGIDSMSQSLALAKKP-HIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 177
Query: 69 RMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
R+++M FE +V I R+T LFSATM KK+Q R+AL P+ V
Sbjct: 178 RILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEK 237
Query: 129 VVQEVEYVKQEAKIVYLLECLQK 151
+ Q ++ + K YL+ L +
Sbjct: 238 LQQYYLFIPSKFKDTYLVYILNE 260
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 220 (82.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/143 (37%), Positives = 82/143 (57%)
Query: 11 IPLRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEAD 68
I ++ + +GG+ M+QSL + KK H+++ATPGRL+D L+ K +L +YL +DEAD
Sbjct: 119 IGVQCAVIVGGIDSMSQSLALAKKP-HIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 177
Query: 69 RMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
R+++M FE +V I R+T LFSATM KK+Q R+AL P+ V
Sbjct: 178 RILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEK 237
Query: 129 VVQEVEYVKQEAKIVYLLECLQK 151
+ Q ++ + K YL+ L +
Sbjct: 238 LQQYYLFIPSKFKDTYLVYILNE 260
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 220 (82.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/143 (37%), Positives = 82/143 (57%)
Query: 11 IPLRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEAD 68
I ++ + +GG+ M+QSL + KK H+++ATPGRL+D L+ K +L +YL +DEAD
Sbjct: 118 IGVQCAVIVGGIDSMSQSLALAKKP-HIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 176
Query: 69 RMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
R+++M FE +V I R+T LFSATM KK+Q R+AL P+ V
Sbjct: 177 RILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEK 236
Query: 129 VVQEVEYVKQEAKIVYLLECLQK 151
+ Q ++ + K YL+ L +
Sbjct: 237 LQQYYLFIPSKFKDTYLVYILNE 259
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 220 (82.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/143 (37%), Positives = 82/143 (57%)
Query: 11 IPLRTCLAIGGVP-MNQSLDVIKKGCHMMVATPGRLMDMLDK-KMVSLDVCRYLCLDEAD 68
I ++ + +GG+ M+QSL + KK H+++ATPGRL+D L+ K +L +YL +DEAD
Sbjct: 121 IGVQCAVIVGGIDSMSQSLALAKKP-HIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 179
Query: 69 RMVDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMN 128
R+++M FE +V I R+T LFSATM KK+Q R+AL P+ V
Sbjct: 180 RILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEK 239
Query: 129 VVQEVEYVKQEAKIVYLLECLQK 151
+ Q ++ + K YL+ L +
Sbjct: 240 LQQYYLFIPSKFKDTYLVYILNE 262
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 219 (82.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+ A GGV +N + ++ G ++VATPGRL+D+L + L LDEADRM+
Sbjct: 114 LKIVAAFGGVSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLS 173
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GF E++ + + Q+QTLLFSAT P++++ L +P+ ++ + Q
Sbjct: 174 LGFTEELEQVLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHL--QSEQESTIEQR 231
Query: 133 VEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
V V +E K L +++ + LIF K + + + L +G
Sbjct: 232 VITVNREQKTALLAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRG 277
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 219 (82.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 13 LRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRMVD 72
L+ A GGV +N + ++ G ++VATPGRL+D+L + L LDEADRM+
Sbjct: 114 LKIVAAFGGVSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLS 173
Query: 73 MGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGAASMNVVQE 132
+GF E++ + + Q+QTLLFSAT P++++ L +P+ ++ + Q
Sbjct: 174 LGFTEELEQVLAALPRQKQTLLFSATFPEEVRALTTKLLHQPLEYHL--QSEQESTIEQR 231
Query: 133 VEYVKQEAKIVYLLECLQKTE-PPVLIFAEKKQDVDAIHEYLLLKG 177
V V +E K L +++ + LIF K + + + L +G
Sbjct: 232 VITVNREQKTALLAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRG 277
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 219 (82.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 54/186 (29%), Positives = 98/186 (52%)
Query: 11 IPLRTCLAIGGVPMNQSLDVIKKGCHMMVATPGRLMDMLDKKMVSLDVCRYLCLDEADRM 70
+ +R GG + + + +++G ++V TPGR++D + +K + + LDEAD M
Sbjct: 96 LKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEM 155
Query: 71 VDMGFEEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITIN-VGRAGAASMNV 129
+DMGF +D+ I + ++QTLLFSAT+P I+ + L T+ VGR ++
Sbjct: 156 LDMGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGRE--KTVPA 213
Query: 130 VQEVEYVKQEAKIVYLLECLQKTEPPV--LIFAEKKQDVDAIHEYLLLKGKPFFTLKSLK 187
+++V Y E + + L + +E P+ ++F K+ VD + E L +G + K L
Sbjct: 214 IRQVYYELPETEKIEGLVSILNSELPIQAIVFCRTKKRVDEVVEQLNFRG---YAAKGLH 270
Query: 188 EDQNNQ 193
D + +
Sbjct: 271 GDMSQR 276
WARNING: HSPs involving 491 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 197 0.00082 111 3 11 22 0.41 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 741
No. of states in DFA: 556 (59 KB)
Total size of DFA: 140 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 17.70u 0.08s 17.78t Elapsed: 00:00:07
Total cpu time: 17.75u 0.09s 17.84t Elapsed: 00:00:09
Start: Thu Aug 15 13:32:29 2013 End: Thu Aug 15 13:32:38 2013
WARNINGS ISSUED: 2