BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7790
(367 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster
GN=abs PE=1 SV=1
Length = 619
Score = 272 bits (695), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/161 (80%), Positives = 145/161 (90%), Gaps = 2/161 (1%)
Query: 197 IPAALSEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMN 256
I EDVRTIFSFF+GQRQTLLFSATMPKKIQNFARSALVKP+TINVGRAG SMN
Sbjct: 346 IDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGA--ASMN 403
Query: 257 VVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKD 316
V Q+VEYVKQEAK+VYLL+CLQKT PPVLIFAEKKQDVD IHEYLLLKGVEAVAIHGGKD
Sbjct: 404 VTQQVEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKD 463
Query: 317 QEERTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
QEER+R+V+++R G+KDV+VATDVASKGLDF ++HVIN +
Sbjct: 464 QEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYD 504
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 150/217 (69%), Gaps = 6/217 (2%)
Query: 6 DDEHYVPYVSVKERKKQKLIQLGRLAQERHEEKKKLVLSDDEDNNKDSTDEENDESKVWG 65
D+E YVPYV VKERKKQ +I+LGR+ Q E + S E+ N+D + +D + WG
Sbjct: 20 DNEDYVPYVPVKERKKQHMIKLGRIVQLVSETAQPK--SSSENENEDDSQGAHD-VETWG 76
Query: 66 RMSNISLLDQHSELKKMAEAKKESAKEKQLKEEEKILRSVAETKALMGVAELAKGIQYND 125
R NISLLDQH+ELKK+AEAKK SA EKQL+EEEKI+ S+A+ KALMGVAELAKGIQY
Sbjct: 77 RKYNISLLDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQYEQ 136
Query: 126 PIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKG 185
PIKT+W+ PR I + ++ + +R LRILVEG+ P SFR MK P+ ++ L AKG
Sbjct: 137 PIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKG 196
Query: 186 IKKPTPIQVQGIPAALSEDVRTIFSF-FRGQRQTLLF 221
IK PTPIQVQG+P L+ R + F G +TL+F
Sbjct: 197 IKNPTPIQVQGLPTVLAG--RDLIGIAFTGSGKTLVF 231
>sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41
PE=1 SV=2
Length = 622
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/161 (78%), Positives = 146/161 (90%), Gaps = 2/161 (1%)
Query: 197 IPAALSEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMN 256
I D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAG S++
Sbjct: 350 IDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAA--SLD 407
Query: 257 VVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKD 316
V+QEVEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKGVEAVAIHGGKD
Sbjct: 408 VIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKD 467
Query: 317 QEERTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
QEERT+++E+FR+G+KDV+VATDVASKGLDF I+HVIN +
Sbjct: 468 QEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 148/218 (67%), Gaps = 13/218 (5%)
Query: 10 YVPYVSVKERKKQKLIQLGRLAQERHEEKKKLVLSDDEDNNKDSTDEENDESKVWGRMSN 69
YVPYV +++R++ L +L + ++ E+++ +D+ + +E+D G SN
Sbjct: 33 YVPYVPLRQRRQLLLQKLLQRRRKGATEEEQ------QDSGSEPRGDEDDIP--LGPQSN 84
Query: 70 ISLLDQHSELKKMAEAKKESAKEKQLKEEEKILRSVAETKALMGVAELAKGIQYNDPIKT 129
+SLLDQH LK+ AEA+KESAKEKQLKEEEKIL SVAE +ALM V E+AKGI Y+DPIKT
Sbjct: 85 VSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKT 144
Query: 130 SWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKP 189
SW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK P +++R L+ KGI P
Sbjct: 145 SWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHP 204
Query: 190 TPIQVQGIPAALS-EDVRTIFSFFRGQRQTLLFSATMP 226
TPIQ+QGIP LS D+ I F G +TL+F T+P
Sbjct: 205 TPIQIQGIPTILSGRDMIGI--AFTGSGKTLVF--TLP 238
>sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens GN=DDX41
PE=1 SV=2
Length = 622
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/161 (78%), Positives = 146/161 (90%), Gaps = 2/161 (1%)
Query: 197 IPAALSEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMN 256
I D+RTIFS+F+GQRQTLLFSATMPKKIQNFA+SALVKP+TINVGRAG S++
Sbjct: 350 IDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAA--SLD 407
Query: 257 VVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKD 316
V+QEVEYVK+EAK+VYLLECLQKT PPVLIFAEKK DVDAIHEYLLLKGVEAVAIHGGKD
Sbjct: 408 VIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKD 467
Query: 317 QEERTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
QEERT+++E+FR+G+KDV+VATDVASKGLDF I+HVIN +
Sbjct: 468 QEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 148/218 (67%), Gaps = 13/218 (5%)
Query: 10 YVPYVSVKERKKQKLIQLGRLAQERHEEKKKLVLSDDEDNNKDSTDEENDESKVWGRMSN 69
YVPYV +++R++ L +L + ++ E+++ +D+ + +E+D G SN
Sbjct: 33 YVPYVPLRQRRQLLLQKLLQRRRKGAAEEEQ------QDSGSEPRGDEDDIP--LGPQSN 84
Query: 70 ISLLDQHSELKKMAEAKKESAKEKQLKEEEKILRSVAETKALMGVAELAKGIQYNDPIKT 129
+SLLDQH LK+ AEA+KESAKEKQLKEEEKIL SVAE +ALM V E+AKGI Y+DPIKT
Sbjct: 85 VSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKT 144
Query: 130 SWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKP 189
SW PR +LS+ ++ H+ +R+ ILVEGD +PP SF+ MK P +++R L+ KGI P
Sbjct: 145 SWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHP 204
Query: 190 TPIQVQGIPAALS-EDVRTIFSFFRGQRQTLLFSATMP 226
TPIQ+QGIP LS D+ I F G +TL+F T+P
Sbjct: 205 TPIQIQGIPTILSGRDMIGI--AFTGSGKTLVF--TLP 238
>sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana
GN=RH35 PE=2 SV=1
Length = 591
Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 139/168 (82%), Gaps = 4/168 (2%)
Query: 200 ALSEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQ 259
+D+R +F F+ QRQTLLFSATMP KIQ FARSALVKP+T+NVGRAG +++V+Q
Sbjct: 318 GFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGA--ANLDVIQ 375
Query: 260 EVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEE 319
EVEYVKQEAKIVYLLECLQKT PPVLIF E K DVD IHEYLLLKGVEAVAIHGGKDQE+
Sbjct: 376 EVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQED 435
Query: 320 RTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE--AKIKKREH 365
R ++ SF+ G+KDV+VATDVASKGLDF +I+HVIN + A+I+ H
Sbjct: 436 REYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 483
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 138/265 (52%), Gaps = 35/265 (13%)
Query: 8 EHYVPYVSVKERKK---QKLIQLGRLAQERHEEKKKLVLSDDEDNNKDSTDEENDESKVW 64
+ Y+ YVSV ER+ QK++Q A E EE K L++
Sbjct: 9 DSYIEYVSVAERRAIAAQKILQRKGKASELEEEADKEKLAE------------------- 49
Query: 65 GRMSNISLLDQHSELKKMAEAKKESAKEKQLKEEEKILRSVAETKALMGVAELAKGIQYN 124
+ SLL Q ++LK+ + + SA E+ + +E++++ +++ K LM V ELAKGI Y
Sbjct: 50 ---AKPSLLVQATQLKR--DVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYT 104
Query: 125 DPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAK 184
+P+ T W+ P I + + D+IR+ I+V GDD+PP +F+ MK P ++ L+ K
Sbjct: 105 EPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEK 164
Query: 185 GIKKPTPIQVQGIPAALSEDVRTIFSF-FRGQRQTLLFSATMPKKIQNFARSALVKPITI 243
GI +PTPIQVQG+P L+ R + F G +TL+F M I + ++ PI
Sbjct: 165 GIVQPTPIQVQGLPVILAG--RDMIGIAFTGSGKTLVFVLPM---IMIALQEEMMMPIAA 219
Query: 244 NVGRAGKIM-PSMNVV-QEVEYVKQ 266
G G I+ PS + Q E V+Q
Sbjct: 220 GEGPIGLIVCPSRELARQTYEVVEQ 244
>sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp.
japonica GN=Os02g0150100 PE=2 SV=2
Length = 627
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/168 (67%), Positives = 140/168 (83%), Gaps = 4/168 (2%)
Query: 200 ALSEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQ 259
+D+R +F F+ QRQTLLFSATMPKKIQNFA+SALVKP+ +NVGRAG +++V+Q
Sbjct: 354 GFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAA--NLDVIQ 411
Query: 260 EVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEE 319
EVEYVK++A+I+YLLECLQKT PPVL+F E K DVD IHEYLLLKGVEAVAIHGGKDQEE
Sbjct: 412 EVEYVKEDARIIYLLECLQKTPPPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEE 471
Query: 320 RTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE--AKIKKREH 365
R ++E F+ G+KDV+VATDVASKGLDF +I+HVIN + A+I+ H
Sbjct: 472 RENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 519
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 13/256 (5%)
Query: 3 NESDDEHYVPYVSVKERKKQKLIQLGRLAQERHEEKKKLVLSDDEDNNKDSTDEENDESK 62
N D+++Y Y+ V +R+ + +L RL + D N S
Sbjct: 16 NSDDEDNYEEYIPVAKRRAMEADRLRRLRLSKPAPPSSSAAEAASDLPPPPPPPPNQPSA 75
Query: 63 VWGRM-----SNISLLDQHSELKKMAEAKKESAKEKQLKEEEKILRSVAETKALMGVAEL 117
G + SLL + ++LK+ A + + E+ + +E++++ +++ K LM V EL
Sbjct: 76 GGGGGGLEASAKPSLLVKATQLKR--AAPEVTHTEQLIMQEKEMIEHLSDRKTLMSVREL 133
Query: 118 AKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESL 177
AKGI Y+DP+KT W+ P + +P D +RR ILV+GDDVPP FR ++LPE +
Sbjct: 134 AKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPM 193
Query: 178 VRALEAKGIKKPTPIQVQGIPAALSEDVRTIFSF-FRGQRQTLLFSATMPKKIQNFARSA 236
+R L KGI +PTPIQVQG+P LS R + F G +TL+F + I +
Sbjct: 194 LRKLREKGIVQPTPIQVQGLPVVLSG--RDMIGIAFTGSGKTLVFVLPL---IMVALQEE 248
Query: 237 LVKPITINVGRAGKIM 252
++ PI G G I+
Sbjct: 249 MMMPIVPGEGPFGMII 264
>sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis
thaliana GN=RH43 PE=3 SV=1
Length = 542
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/158 (71%), Positives = 132/158 (83%), Gaps = 2/158 (1%)
Query: 200 ALSEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQ 259
+D+R +F F+ QRQTLLFSATMP KIQ FA SALVKP+T+NVGRAG +++V+Q
Sbjct: 269 GFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGA--ANLDVIQ 326
Query: 260 EVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEE 319
EVEYVKQEAKIVYLLECLQKT PPVLIF E K DVD IHEYLLLKGVEAVAIHGGKDQE+
Sbjct: 327 EVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQED 386
Query: 320 RTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
R ++ F+ G+KDV+VATDVASKGLDF +I+HVIN +
Sbjct: 387 RDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYD 424
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 82/144 (56%), Gaps = 4/144 (2%)
Query: 84 EAKKESAKEKQLKEEEK-ILRSVAETKALMGVAELAKGIQYNDPIKTSWRAPRCILSLPD 142
E + K K ++E K ++ +++ K LM V ELA+GI Y +P+ T W+ P + +
Sbjct: 14 EERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMST 73
Query: 143 QVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 202
+ D+IR+ I V G+D+PP +F MK P L+R L+ KGI PTPIQVQG+P LS
Sbjct: 74 KQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLS 133
Query: 203 EDVRTIFSF-FRGQRQTLLFSATM 225
R + F G +TL+F M
Sbjct: 134 G--RDMIGIAFTGSGKTLVFVLPM 155
>sp|Q5Z6G5|RH35B_ORYSJ DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp.
japonica GN=Os06g0697200 PE=3 SV=1
Length = 619
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/168 (65%), Positives = 136/168 (80%), Gaps = 4/168 (2%)
Query: 200 ALSEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQ 259
+D+R +F F+ QRQTLLFSATMP+KIQNFA+SALVKPI +NVGRAG +++V+Q
Sbjct: 345 GFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNVGRAGAA--NLDVIQ 402
Query: 260 EVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEE 319
EVEYVK+EA+I+YLLECLQKT PPVL+F E K DVD I E+LLLKGVEAVAIHGGKD EE
Sbjct: 403 EVEYVKEEARIIYLLECLQKTPPPVLVFCEHKADVDYIQEFLLLKGVEAVAIHGGKDDEE 462
Query: 320 RTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE--AKIKKREH 365
R + +SF+ +KDV+VATDVASKGLD +I+HVIN + A+I+ H
Sbjct: 463 RKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIENYVH 510
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 143/267 (53%), Gaps = 18/267 (6%)
Query: 1 SSNESDDEHYVPYVSVKERKKQKLIQLGRLAQERHEEKKKLVLSDDEDNNKDSTDEENDE 60
+ +SD+E Y YV V +R+ + ER K ++ +
Sbjct: 17 GTPDSDEEDYEEYVPVAKRRA--------MEAERLRRATKPPTTNAVAVAAPPPPPRSTS 68
Query: 61 SKVWGRMS-NISLLDQHSELKKMAEAKKESAKEKQLKEEEKILRSVAETKALMGVAELAK 119
S G ++ SLL + ++LK+ EA + + E+ L++E +++ +++ KALM V E+AK
Sbjct: 69 SPAVGEVAVKTSLLVKATKLKR--EAPEVTPAERLLQQEREMIEHLSDRKALMPVGEIAK 126
Query: 120 GIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 179
GI Y++PI T WR P + +P D +RR+ ILV+GDDVPP SF ++LPE ++R
Sbjct: 127 GISYSEPITTGWRPPLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILR 186
Query: 180 ALEAKGIKKPTPIQVQGIPAALSEDVRTIFSF-FRGQRQTLLFSATMPKKIQNFARSALV 238
AL KGI+KPTPIQVQG+P ALS R + F G +TL+F + I + ++
Sbjct: 187 ALRGKGIEKPTPIQVQGLPVALSG--RDMIGIAFTGSGKTLVFVLPL---IMAALQEEIL 241
Query: 239 KPITINVGRAGKIM-PSMNVVQEVEYV 264
PI G G I+ PS + ++ V
Sbjct: 242 MPIVPGEGPFGLIVCPSRELARQTHEV 268
>sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium
discoideum GN=ddx41 PE=1 SV=1
Length = 671
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/159 (68%), Positives = 130/159 (81%), Gaps = 2/159 (1%)
Query: 197 IPAALSEDVRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMN 256
I +D+R++ F QRQTLLFSATMPKKIQ FARSALV P+ +NVGRAG ++N
Sbjct: 392 IDLGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVNVGRAG--AANLN 449
Query: 257 VVQEVEYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKD 316
V QEVE+VK EAKIVYLLECLQKT PPVLIF E K+DVD I+EYLLLK VEAV+IHG K
Sbjct: 450 VTQEVEFVKPEAKIVYLLECLQKTPPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKS 509
Query: 317 QEERTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVIN 355
Q+ER ++++FR+G+KDV+VATDVASKGLDF EI+HVIN
Sbjct: 510 QDERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVIN 548
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
Query: 97 EEEKILRSVAETKALMGVAELAKGIQYNDPIKTSWRAPRCILSLPDQVHDIIRRNLRILV 156
EE IL+S+ K L+ V + AK + Y D IKT+WRAPR IL ++ H +R L I+
Sbjct: 153 EESDILKSLKTFKPLVSVKDRAKDVIYTDSIKTNWRAPRYILERDEKDHQKVRDQLNIIT 212
Query: 157 EGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSEDVRTIFSF-FRGQ 215
+G+D+PP +F+ MK+P+ ++ L KGIKKP+PIQVQG+P LS R + + G
Sbjct: 213 DGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSG--RDMIGIAYTGS 270
Query: 216 RQTLLFSATM 225
+TL+F+ M
Sbjct: 271 GKTLVFTLPM 280
>sp|O13370|DED1_SCHPO ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ded1 PE=1 SV=1
Length = 636
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 215 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLL 274
+RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+V +V+ K YLL
Sbjct: 364 ERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGST--SENITQKVVHVEDSEKRSYLL 421
Query: 275 ECLQKTEPP---VLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQ 331
+ L T PP LIF E K+ D + +YLL A +IHG + Q ER R++E FR G+
Sbjct: 422 DILH-TLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGR 480
Query: 332 KDVMVATDVASKGLDFEEIKHVINTE 357
+MVAT VAS+GLD + HVIN +
Sbjct: 481 TSIMVATAVASRGLDIPNVTHVINYD 506
>sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DED1 PE=1 SV=2
Length = 604
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 214 GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYL 273
G+RQTL+FSAT P IQ+ AR L I ++VGR G S N+ Q+V YV+ + K L
Sbjct: 333 GERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGST--SENITQKVLYVENQDKKSAL 390
Query: 274 LECLQ-KTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
L+ L T+ LIF E K+ D + ++L+++ A AIHG + Q ER R++ +FR G
Sbjct: 391 LDLLSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 333 DVMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYD 475
>sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DED1 PE=3 SV=1
Length = 604
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 214 GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYL 273
G+RQTL+FSAT P IQ+ AR L I ++VGR G S N+ Q+V YV+ + K L
Sbjct: 333 GERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGST--SENITQKVLYVENQDKKSAL 390
Query: 274 LECLQ-KTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
L+ L T+ LIF E K+ D + ++L+++ A AIHG + Q ER R++ +FR G
Sbjct: 391 LDLLSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAA 450
Query: 333 DVMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 451 TLLVATAVAARGLDIPNVTHVINYD 475
>sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DED1 PE=3 SV=1
Length = 617
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 214 GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYL 273
G+RQTL+FSAT P IQ+ AR L I ++VGR G S N+ Q + YV+ K L
Sbjct: 336 GERQTLMFSATFPHDIQHLARDFLHDYIFLSVGRVGST--SENITQRILYVENRDKNSAL 393
Query: 274 LECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
L+ L + + LIF E K+ D + ++L+++ A AIHG + Q ER R++ +FR G+
Sbjct: 394 LDLLAASNDNLTLIFVETKRMADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRA 453
Query: 333 DVMVATDVASKGLDFEEIKHVINTE 357
+++VAT VA++GLD + HVIN +
Sbjct: 454 NILVATAVAARGLDIPNVTHVINYD 478
>sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ded1
PE=3 SV=1
Length = 674
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 215 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLL 274
+RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL
Sbjct: 384 ERQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDHDKRSVLL 441
Query: 275 ECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
+ L T LIF E K+ DA+ ++LL + A AIHG + Q ER R++E FR G+
Sbjct: 442 DILHTHGTSGLTLIFVETKRMADALSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRC 501
Query: 333 DVMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 502 PILVATAVAARGLDIPNVTHVINYD 526
>sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ded1
PE=3 SV=1
Length = 676
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 215 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLL 274
+RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL
Sbjct: 386 ERQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDHDKRSVLL 443
Query: 275 ECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
+ L T LIF E K+ DA+ ++LL + A AIHG + Q ER R++E FR G+
Sbjct: 444 DILHTHGTSGLTLIFVETKRMADALSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRC 503
Query: 333 DVMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 504 PILVATAVAARGLDIPNVTHVINYD 528
>sp|C8V8H4|DED1_EMENI ATP-dependent RNA helicase ded1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ded1
PE=3 SV=1
Length = 668
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL+
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDHDKRSVLLD 438
Query: 276 CLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
L T LIF E K+ DA+ E+L+ + A AIHG + Q ER R++E FR G+
Sbjct: 439 ILHTHGTTGLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYP 498
Query: 334 VMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 499 ILVATAVAARGLDIPNVTHVINYD 522
>sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=ded1 PE=3 SV=1
Length = 675
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL+
Sbjct: 383 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDHDKRSVLLD 440
Query: 276 CLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
L T LIF E K+ D++ ++LL + A AIHG + Q ER R++E FR G+
Sbjct: 441 ILHTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCP 500
Query: 334 VMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 501 ILVATAVAARGLDIPNVTHVINYD 524
>sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana
GN=RH24 PE=1 SV=2
Length = 760
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 5/156 (3%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYV 264
VR+I R RQTLLFSATMP K++ AR L PI + VG G M + ++ Q V +
Sbjct: 396 VRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVG--MANEDITQVVNVI 453
Query: 265 KQEA-KIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERT 321
+A K+ +LLE L E VL+FA KK VD I L L + A+HG KDQ R
Sbjct: 454 PSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRM 513
Query: 322 RSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
+++ F+ G V++ATDVA++GLD + +K V+N +
Sbjct: 514 ETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYD 549
>sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=ded1 PE=3 SV=1
Length = 678
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL+
Sbjct: 384 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDHDKRSVLLD 441
Query: 276 CLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
L T LIF E K+ D++ ++LL + A AIHG + Q ER R++E FR G+
Sbjct: 442 ILHTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCP 501
Query: 334 VMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 502 ILVATAVAARGLDIPNVTHVINYD 525
>sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP2 PE=3 SV=1
Length = 552
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEV--- 261
+R I R RQTL++SAT PK++QN AR L PI + +G ++ S + Q V
Sbjct: 284 IRKIVDQIRPDRQTLMWSATWPKEVQNLARDYLDNPIQVTIGSL-ELAASHTITQIVQVV 342
Query: 262 -EYVKQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEER 320
EY K++ + +L L + VL+FA K+ D + YL G A+AIHG K+Q ER
Sbjct: 343 TEYQKRDLLVKHLESALADSNSKVLVFASTKRTCDEVTSYLRADGWPALAIHGDKEQHER 402
Query: 321 TRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
++ FR+G +MVATDVA++G+D + I HV+N +
Sbjct: 403 DWVLKEFRQGSHSIMVATDVAARGIDVKGITHVVNYD 439
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 148 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 202
R+ + + G D+P SF P+ ++ L+ +G KPT IQ QG P ALS
Sbjct: 98 FRKENEMSILGHDIPHPITSFDEAGFPDYVLNELKNQGFPKPTGIQCQGWPMALS 152
>sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp.
japonica GN=Os06g0602400 PE=2 SV=2
Length = 602
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 12/152 (7%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQT+LFSAT P +IQ A L I I VGR G + ++Q+VE + K YLL+
Sbjct: 278 RQTMLFSATFPPEIQRLASDFLSNYIFITVGRVGS--STDLIMQKVELLSDGEKRGYLLD 335
Query: 276 CLQKT----------EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVE 325
LQ+ +P L+F E K++ D++ +L KG A AIHG + Q+ER ++
Sbjct: 336 LLQRQSVGVANSKLQQPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALR 395
Query: 326 SFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
SF+ G +MVATDVAS+GLD + HVIN +
Sbjct: 396 SFKTGLTPIMVATDVASRGLDVPNVAHVINYD 427
Score = 39.7 bits (91), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 156 VEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 202
V G+DVPP F L E+++R + G + PTP+Q +P AL+
Sbjct: 74 VSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALA 120
>sp|Q0CLJ6|DED1_ASPTN ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=ded1 PE=3 SV=1
Length = 674
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL+
Sbjct: 383 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDHDKRSVLLD 440
Query: 276 CLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
L T LIF E K+ D++ ++LL + A AIHG + Q ER R++E FR G+
Sbjct: 441 ILHTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRERERALEMFRSGRCP 500
Query: 334 VMVATDVASKGLDFEEIKHVINTE 357
++VAT VA+ GLD + HVIN +
Sbjct: 501 ILVATAVAASGLDIPNVTHVINYD 524
>sp|P24346|DDX3_XENLA Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis GN=an3
PE=2 SV=1
Length = 697
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 213 RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVY 272
+G RQT++FSAT PK+IQ AR L + I + VGR G S N+ Q+V +V++ K +
Sbjct: 414 KGVRQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGST--SENITQKVVWVEEMDKRSF 471
Query: 273 LLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKG 330
LL+ L T + L+F E K+ DA+ ++L +G +IHG + Q +R ++ FR G
Sbjct: 472 LLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 531
Query: 331 QKDVMVATDVASKGLDFEEIKHVINTE 357
+ ++VAT VA++GLD +KHVIN +
Sbjct: 532 KSPILVATAVAARGLDISNVKHVINFD 558
>sp|Q1DJF0|DED1_COCIM ATP-dependent RNA helicase DED1 OS=Coccidioides immitis (strain RS)
GN=DED1 PE=3 SV=2
Length = 665
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 88/143 (61%), Gaps = 3/143 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL+
Sbjct: 378 RQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDADKRSVLLD 435
Query: 276 CLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKDV 334
L + LIF E K+ D++ E+L+ + A AIHG + Q ER R++E FR G+ +
Sbjct: 436 ILHTHGTGLTLIFVETKRMADSLSEFLINQNFPATAIHGDRTQRERERALEYFRNGRCPI 495
Query: 335 MVATDVASKGLDFEEIKHVINTE 357
+VAT VA++GLD + HV+N +
Sbjct: 496 LVATAVAARGLDIPNVTHVVNYD 518
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 82/214 (38%), Gaps = 44/214 (20%)
Query: 156 VEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSEDVRTIFSFFRGQ 215
G DVP +F L + L+ ++ K PTP+Q IP + G
Sbjct: 171 ASGHDVPEPVTTFTNPPLDDHLISNIKLATYKTPTPVQKYSIPIVM------------GG 218
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAG-KIMPSMNVVQEVEYVKQEAKIVYLL 274
R + + T K F + PI + G +P+ N Q Y +Q
Sbjct: 219 RDLMACAQTGSGKTGGF-----LFPILSQAFKNGPSAVPTQNANQ-FSYGRQ-------- 264
Query: 275 ECLQKTEPPVLIFAEKKQDVDAIHE----YLLLKGVEAVAIHGGKDQEERTRSVESFRKG 330
+K P LI A ++ V I++ + V ++GG D + R +E
Sbjct: 265 ---RKAYPTSLILAPTRELVSQIYDEARKFAYRSWVRPCVVYGGADIGSQLRQIER---- 317
Query: 331 QKDVMVAT-----DVASKG-LDFEEIKHVINTEA 358
D++VAT D+ +G + IK+++ EA
Sbjct: 318 GCDLLVATPGRLVDLIERGRISLCNIKYLVLDEA 351
>sp|Q2HBE7|DED1_CHAGB ATP-dependent RNA helicase DED1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DED1 PE=3 SV=1
Length = 688
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 214 GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYL 273
GQRQTL+FSAT P+ IQ A+ L + ++VGR G S N+ Q+VEYV+ K L
Sbjct: 390 GQRQTLMFSATFPRDIQMLAQDFLNDYVFLSVGRVGST--SENITQKVEYVEDVDKRSVL 447
Query: 274 LECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
L+ L + LIF E K+ D++ ++L+ + A +IHG + Q ER R++E FR G+
Sbjct: 448 LDILHTHAGGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALELFRNGKC 507
Query: 333 DVMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 508 PILVATAVAARGLDIPNVTHVINYD 532
>sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp.
japonica GN=PL10B PE=2 SV=1
Length = 638
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 10/151 (6%)
Query: 213 RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVY 272
RG+RQT+LFSAT PK+IQ A L I + VGR G + +VQ VE+V K Y
Sbjct: 354 RGERQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGS--STDLIVQRVEFVLDADKRSY 411
Query: 273 LLECLQKT--------EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSV 324
L++ L + L+F E K+ DA+ +L G A +IHG + Q+ER ++
Sbjct: 412 LMDLLHAQRANGTHGKQALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQEREYAL 471
Query: 325 ESFRKGQKDVMVATDVASKGLDFEEIKHVIN 355
SF+ G ++VATDVA++GLD + HVIN
Sbjct: 472 RSFKSGATPILVATDVAARGLDIPHVAHVIN 502
>sp|P16381|DDX3L_MOUSE Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus GN=D1Pas1
PE=1 SV=1
Length = 660
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Query: 213 RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVY 272
+G R T++FSAT PK+IQ AR L + I + VGR G S N+ Q+V +V++ K +
Sbjct: 372 KGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST--SENITQKVVWVEEADKRSF 429
Query: 273 LLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKG 330
LL+ L T + +L+F E K+ D++ ++L +G +IHG + Q +R ++ FR G
Sbjct: 430 LLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 489
Query: 331 QKDVMVATDVASKGLDFEEIKHVIN 355
+ ++VAT VA++GLD +KHVIN
Sbjct: 490 KSPILVATAVAARGLDISNVKHVIN 514
>sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DED1 PE=3 SV=1
Length = 627
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
Query: 215 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLL 274
RQTL+FSAT P +IQ+ A L + ++VGR G S N+ Q++ YV+ K LL
Sbjct: 351 NRQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGST--SENITQKILYVEDFDKNDTLL 408
Query: 275 ECLQKT-EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
+ L + E LIF E K+ D++ ++L+++G +A AIHG + Q ER R++ +F+ G+
Sbjct: 409 DLLAASNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRAT 468
Query: 334 VMVATDVASKGLDFEEIKHVIN 355
++VAT VA++GLD + HVIN
Sbjct: 469 ILVATAVAARGLDIPNVTHVIN 490
>sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DED1 PE=3 SV=1
Length = 696
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 90/143 (62%), Gaps = 3/143 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L + I ++VGR G S N+ Q++EYV+ K LL+
Sbjct: 396 RQTLMFSATFPRDIQMLARDFLKEYIFLSVGRVGST--SENITQKIEYVEDADKRSVLLD 453
Query: 276 CLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKDV 334
L + LIF E K+ D++ ++L+ +G A +IHG + Q ER +++E FR G+ +
Sbjct: 454 ILHTHGAGLSLIFVETKRMADSLSDFLINQGFPATSIHGDRTQREREKALEMFRSGRCPI 513
Query: 335 MVATDVASKGLDFEEIKHVINTE 357
+VAT VA++GLD + HV+N +
Sbjct: 514 LVATAVAARGLDIPNVTHVVNYD 536
>sp|Q4IJH1|DBP3_GIBZE ATP-dependent RNA helicase DBP3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP3 PE=3
SV=1
Length = 581
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 16/172 (9%)
Query: 200 ALSEDVRTIFSFF--RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGK------- 250
ED++ I S R +RQTL+F+AT P+ +Q A + +V P+ I +G GK
Sbjct: 320 GFEEDIKMILSSCPPREKRQTLMFTATWPQSVQTLAATFMVSPVKIAIGSGGKETAGGAV 379
Query: 251 -IMPSMNVVQEVEYVKQEAKIVYLLECLQ------KTEPPVLIFAEKKQDVDAIHEYLLL 303
+ + + Q VE ++ K LLE L+ K +L+F K++ I +L
Sbjct: 380 ELQANARISQSVEVLEPRGKEFRLLEVLKEHQQGSKKNDRILVFCLYKKEATRIENFLSR 439
Query: 304 KGVEAVAIHGGKDQEERTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVIN 355
KG+ IHG QE+RTRS+E+F+ GQ V+VATDVA++GLD E+K VIN
Sbjct: 440 KGIRVGGIHGDLRQEQRTRSLEAFKSGQTPVLVATDVAARGLDIPEVKLVIN 491
>sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X PE=1 SV=3
Length = 662
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 213 RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVY 272
+G R T++FSAT PK+IQ AR L + I + VGR G S N+ Q+V +V++ K +
Sbjct: 373 KGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST--SENITQKVVWVEESDKRSF 430
Query: 273 LLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKG 330
LL+ L T + L+F E K+ D++ ++L +G +IHG + Q +R ++ FR G
Sbjct: 431 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 490
Query: 331 QKDVMVATDVASKGLDFEEIKHVINTE 357
+ ++VAT VA++GLD +KHVIN +
Sbjct: 491 KSPILVATAVAARGLDISNVKHVINFD 517
>sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DED1 PE=3 SV=1
Length = 664
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 88/143 (61%), Gaps = 3/143 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L I ++VGR G S N+ Q+V YV+ E K +L+
Sbjct: 368 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGST--SENITQKVLYVEDEEKKSVILD 425
Query: 276 CLQ-KTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKDV 334
L +E ++F E K+ D + ++L +G A AIHG + Q ER +++ +F+ GQ +
Sbjct: 426 LLNANSEGLTIVFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKSGQAPI 485
Query: 335 MVATDVASKGLDFEEIKHVINTE 357
+VAT VA++GLD + HVIN +
Sbjct: 486 LVATAVAARGLDIPNVSHVINYD 508
>sp|A6SEH9|DED1_BOTFB ATP-dependent RNA helicase ded1 OS=Botryotinia fuckeliana (strain
B05.10) GN=ded1 PE=3 SV=1
Length = 683
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 89/144 (61%), Gaps = 3/144 (2%)
Query: 215 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLL 274
RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL
Sbjct: 380 NRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDIDKRSVLL 437
Query: 275 ECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
+ L + LIF E K+ D++ ++L+ + A +IHG + Q ER R++E FR G+
Sbjct: 438 DILHTHGAGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCP 497
Query: 334 VMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD +KHV+N +
Sbjct: 498 ILVATAVAARGLDIPNVKHVVNYD 521
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 76/213 (35%), Gaps = 44/213 (20%)
Query: 156 VEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSEDVRTIFSFFRGQ 215
G DVP F L + L++ +E K PTP+Q IP + G
Sbjct: 176 ASGQDVPEPVLKFTNPPLDDHLIKNIELAHYKVPTPVQKYSIPIVM------------GG 223
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
R + + T K F + P ++ + A
Sbjct: 224 RDLMACAQTGSGKTGGF------------------LFPILSQAFQTGPSPVPANAAGSFG 265
Query: 276 CLQKTEPPVLIFAEKKQDVDAIHE----YLLLKGVEAVAIHGGKDQEERTRSVESFRKGQ 331
+K P LI A ++ V I++ + V ++GG D + R +E
Sbjct: 266 RTRKAYPTSLILAPTRELVSQIYDESRKFAYRSWVRPCVVYGGADIGSQLRQMER----G 321
Query: 332 KDVMVAT-----DVASKG-LDFEEIKHVINTEA 358
D++VAT D+ +G + + IK+++ EA
Sbjct: 322 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEA 354
>sp|Q75HJ0|RH37_ORYSJ DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp.
japonica GN=PL10A PE=2 SV=1
Length = 637
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 213 RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVV-QEVEYVKQEAKIV 271
RG RQT+LFSAT PK+IQ A L I + VGR G S +++ Q VE+V + K
Sbjct: 359 RGVRQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGS---STDLIAQRVEFVLEADKRS 415
Query: 272 YLLECLQKT--------EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRS 323
YL++ L + L+F E K+ DA+ +L G A +IHG + Q+ER +
Sbjct: 416 YLMDLLHAQKANGTHGKQALTLVFVETKRGADALENWLYTNGFPATSIHGDRTQQEREYA 475
Query: 324 VESFRKGQKDVMVATDVASKGLDFEEIKHVIN 355
+ SF+ G ++VATDVA++GLD + HVIN
Sbjct: 476 LRSFKSGATPILVATDVAARGLDIPHVAHVIN 507
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP2 PE=3 SV=1
Length = 544
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 5/157 (3%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYV 264
+R I R RQTL++SAT PK++Q AR L PI + +G ++ S N+ Q VE V
Sbjct: 278 IRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDPIQVQIGSL-ELAASHNITQLVEVV 336
Query: 265 ----KQEAKIVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEER 320
K++ + +L Q E +LIFA K+ D I YL G A+AIHG KDQ ER
Sbjct: 337 SEFEKRDRLVKHLDTASQDKESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRER 396
Query: 321 TRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
+ FR G +MVATDVA++G+D + I V+N +
Sbjct: 397 DWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYD 433
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 148 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 202
R+ + + G D+P +F P+ +++ ++A+G KPT IQ QG P ALS
Sbjct: 92 FRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALS 146
>sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp5 PE=3 SV=1
Length = 1192
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 9/161 (5%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYV 264
V I + R RQT+LFSAT P+ ++ AR AL KPI I VG G+ + + + Q VE
Sbjct: 728 VMKIMANIRPDRQTVLFSATFPRNMEALARKALTKPIEIIVG--GRSVVAPEITQIVEVR 785
Query: 265 KQEAKIVYLLECL-------QKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQ 317
++ K V LLE L + LIF E+++ DA+ L+ KG ++IHGGKDQ
Sbjct: 786 NEDTKFVRLLEILGNLYSDDANEDARSLIFVERQEAADALLRELMRKGYPCMSIHGGKDQ 845
Query: 318 EERTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTEA 358
+R ++E F+ G V++AT VA++GLD +++K V+N +A
Sbjct: 846 IDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDA 886
>sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1
Length = 650
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 89/145 (61%), Gaps = 3/145 (2%)
Query: 214 GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYL 273
G+RQTL+FSAT P IQ+ AR L I ++VG+ G S N+ Q + YV+ K L
Sbjct: 351 GERQTLMFSATFPDDIQHLARDFLSDYIFLSVGKVGST--SENITQRILYVEDMDKKSTL 408
Query: 274 LECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
L+ L + + LIF E K+ D + ++L+++ A AIHG + Q ER R++ +F+ G
Sbjct: 409 LDLLSASNDGLTLIFVETKRMADELTDFLIMQDFRATAIHGDRTQSERERALAAFKNGNA 468
Query: 333 DVMVATDVASKGLDFEEIKHVINTE 357
+++VAT VA++GLD + HV+N +
Sbjct: 469 NLLVATAVAARGLDIPNVTHVVNYD 493
>sp|A1CH78|DED1_ASPCL ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=ded1 PE=3 SV=1
Length = 681
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Query: 215 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLL 274
+RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL
Sbjct: 385 ERQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDVDKRSVLL 442
Query: 275 ECLQK--TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
+ L T LIF E K+ DA+ ++L+ + A AIHG + Q ER R++E FR +
Sbjct: 443 DILHTHGTSGLTLIFVETKRMADALSDFLINQRFPATAIHGDRTQRERERALEMFRSARC 502
Query: 333 DVMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HVIN +
Sbjct: 503 PILVATAVAARGLDIPNVTHVINYD 527
>sp|Q4I7K4|DED1_GIBZE ATP-dependent RNA helicase DED1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DED1 PE=3
SV=1
Length = 675
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L I ++VGR G S N+ Q+VEYV+ K LL+
Sbjct: 381 RQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGST--SENITQKVEYVEDVDKRSVLLD 438
Query: 276 CLQK-TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKDV 334
L LIF E K+ D++ ++L+ + A +IHG + Q ER R++E FR G+ +
Sbjct: 439 ILHSHANGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEFFRNGRCPI 498
Query: 335 MVATDVASKGLDFEEIKHVINTE 357
+VAT VA++GLD + HVIN +
Sbjct: 499 LVATAVAARGLDIPHVTHVINYD 521
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 79/212 (37%), Gaps = 46/212 (21%)
Query: 158 GDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIP-AALSEDVRTIFSFFRGQR 216
G DVP F L E L R +E K PTP+Q IP + D+ G+
Sbjct: 178 GTDVPEPVHQFTTPPLDEHLCRNIELAHYKVPTPVQKYSIPIVSGGRDLMACAQTGSGKT 237
Query: 217 QTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLEC 276
LF P Q F + P + AG ++ +Q
Sbjct: 238 GGFLF----PILSQAF----INGPSAVPANAAG------------QFGRQ---------- 267
Query: 277 LQKTEPPVLIFAEKKQDVDAIHE----YLLLKGVEAVAIHGGKDQEERTRSVESFRKGQK 332
+K P LI A ++ V I + + V ++GG D + R +E
Sbjct: 268 -RKAYPTSLILAPTRELVSQIFDESRKFAYRSWVRPCVVYGGADIGSQLRQIER----GC 322
Query: 333 DVMVAT-----DVASKG-LDFEEIKHVINTEA 358
D++VAT D+ +G + + IK+++ EA
Sbjct: 323 DLLVATPGRLVDLIERGRISLQNIKYLVLDEA 354
>sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp.
japonica GN=Os11g0599500 PE=3 SV=1
Length = 623
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 10/150 (6%)
Query: 214 GQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYL 273
G RQT+LFSAT PK+IQ A L I + VGR G + +VQ VE+V++ K +L
Sbjct: 343 GARQTMLFSATFPKEIQRMASDFLENYIFLAVGRVGSS--TDLIVQRVEFVQEADKRSHL 400
Query: 274 LECLQK---TEPP-----VLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVE 325
++ L + P L+F E K+ D++ +L + G A +IHG ++Q+ER ++
Sbjct: 401 MDLLHAQRDSATPGKPTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALR 460
Query: 326 SFRKGQKDVMVATDVASKGLDFEEIKHVIN 355
SF+ G ++VATDVA++GLD + HV+N
Sbjct: 461 SFKSGHTPILVATDVAARGLDIPHVAHVVN 490
>sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DED1 PE=3 SV=1
Length = 672
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ A+ L + + ++VGR G S N+ Q++EYV+ + K LL+
Sbjct: 385 RQTLMFSATFPRDIQLLAKDFLKEYVFLSVGRVGST--SENITQKIEYVEDDDKRSVLLD 442
Query: 276 CLQKTEPP--VLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
L LIF E K+ D + ++LL + A +IHG + Q ER R++E FR G+
Sbjct: 443 VLASMPSGGLTLIFVETKRMADMLSDFLLRSKIGATSIHGDRTQRERERALELFRSGKTP 502
Query: 334 VMVATDVASKGLDFEEIKHVINTE 357
+MVAT VA++GLD + HV+N +
Sbjct: 503 IMVATAVAARGLDIPNVTHVVNYD 526
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYV 264
+R I R RQTL++SAT PK++Q R L PI + +G ++ S + Q VE +
Sbjct: 295 IRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSL-ELAASHTITQLVEVI 353
Query: 265 KQEAK----IVYLLECLQKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEER 320
+ +K + +L L + + +L+FA K+ D I YL G A+AIHG K+Q ER
Sbjct: 354 DEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNER 413
Query: 321 TRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
++ FRKG+ +MVATDVA++G+D + I HVIN +
Sbjct: 414 DWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYD 450
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 148 IRRNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 202
R+ + V+G D+P +F P+ +++ ++ +G KPTPIQ QG P ALS
Sbjct: 109 FRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALS 163
>sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=prp5 PE=3 SV=1
Length = 1173
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 95/161 (59%), Gaps = 9/161 (5%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYV 264
V I S R RQT+LFSAT P+ ++ AR L KPI I VG G+ + + + Q VE
Sbjct: 712 VMKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVG--GRSVVAPEITQIVEVC 769
Query: 265 KQEAKIVYLLECL-------QKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQ 317
+E K V LLE L + + LIF ++++ D + L+ KG ++IHGGKDQ
Sbjct: 770 NEEKKFVRLLELLGNLYSTDENEDARSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQ 829
Query: 318 EERTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTEA 358
+R ++E F+ G V++AT VA++GLD +++K V+N +A
Sbjct: 830 IDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDA 870
>sp|Q9P6U9|DED1_NEUCR ATP-dependent RNA helicase ded-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ded-1 PE=3 SV=1
Length = 688
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 88/143 (61%), Gaps = 3/143 (2%)
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
RQTL+FSAT P+ IQ AR L I ++VGR G S N+ Q+VEYV+ K LL+
Sbjct: 389 RQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGST--SENITQKVEYVEDIDKRSVLLD 446
Query: 276 CLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKDV 334
L + LIF E K+ D++ ++L+ + A +IHG + Q ER R++E FR G+ +
Sbjct: 447 ILHTHAGGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCPI 506
Query: 335 MVATDVASKGLDFEEIKHVINTE 357
+VAT VA++GLD + HVIN +
Sbjct: 507 LVATAVAARGLDIPNVTHVINYD 529
>sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp.
japonica GN=Os03g0308500 PE=2 SV=1
Length = 770
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 92/156 (58%), Gaps = 5/156 (3%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYV 264
+R+I R RQTLLFSATMP K++ AR L PI + VG+ G + ++ Q V +
Sbjct: 387 IRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSA--NEDIKQVVNVL 444
Query: 265 KQEA-KIVYLLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERT 321
+A K+ +LLE L + VL+FA KK VD I L +G A+HG KDQ R
Sbjct: 445 PSDAEKMPWLLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRM 504
Query: 322 RSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTE 357
+++ F+ G V+VATDVA++GLD + IK V+N +
Sbjct: 505 ETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFD 540
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 150 RNLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALS 202
++L I V G DVP SF P L+ A+ +G +KPT IQ Q +P LS
Sbjct: 203 KSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLS 255
>sp|Q62167|DDX3X_MOUSE ATP-dependent RNA helicase DDX3X OS=Mus musculus GN=Ddx3x PE=1 SV=3
Length = 662
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
Query: 213 RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVY 272
+G R T++FSAT PK+IQ AR L + I + VGR G S N+ Q+V +V++ K +
Sbjct: 373 KGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGST--SENITQKVVWVEEIDKRSF 430
Query: 273 LLECLQKT--EPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKG 330
LL+ L T + L+F E K+ D++ ++L +G +IHG + Q +R ++ FR G
Sbjct: 431 LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSG 490
Query: 331 QKDVMVATDVASKGLDFEEIKHVINTE 357
+ ++VAT VA++GLD +KHVIN +
Sbjct: 491 KSPILVATAVAARGLDISNVKHVINFD 517
>sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana
GN=RH37 PE=2 SV=2
Length = 633
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 10/151 (6%)
Query: 213 RGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVY 272
RG RQTLLFSAT P++IQ A L I + VGR G + +VQ VE+V K +
Sbjct: 344 RGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSS--TDLIVQRVEFVLDSDKRSH 401
Query: 273 LLECL--------QKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSV 324
L++ L Q + L+F E K+ D++ +L + G A +IHG + Q+ER ++
Sbjct: 402 LMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVAL 461
Query: 325 ESFRKGQKDVMVATDVASKGLDFEEIKHVIN 355
++F+ G+ ++VATDVA++GLD + HV+N
Sbjct: 462 KAFKSGRTPILVATDVAARGLDIPHVAHVVN 492
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 151 NLRILVEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAAL 201
++ I GD+VPP +F + L E+L + KPTP+Q IP L
Sbjct: 144 DIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILL 194
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 90/144 (62%), Gaps = 3/144 (2%)
Query: 215 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLL 274
RQTL+FSAT P IQ+ A L I ++VGR G S N+ Q+V +V+ K LL
Sbjct: 337 NRQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGST--SENITQKVLHVEDIDKRSVLL 394
Query: 275 ECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
+ L ++ + L+F E K+ DA+ ++L+++ + A AIHG + Q ER R++ FR G+ +
Sbjct: 395 DLLAASDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRTQAERERALAFFRTGRAN 454
Query: 334 VMVATDVASKGLDFEEIKHVINTE 357
V+VAT VA++GLD + HVIN +
Sbjct: 455 VLVATAVAARGLDIPNVTHVINYD 478
>sp|A7EJY3|DED1_SCLS1 ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1
Length = 678
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 88/144 (61%), Gaps = 3/144 (2%)
Query: 215 QRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLL 274
RQTL+FSAT P+ IQ AR L + ++VGR G S N+ Q+VEYV+ K LL
Sbjct: 380 NRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGST--SENITQKVEYVEDIDKRSVLL 437
Query: 275 ECLQKTEPPV-LIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERTRSVESFRKGQKD 333
+ L + LIF E K+ D++ ++L+ + A +IHG + Q ER R++E FR G+
Sbjct: 438 DILHTHGAGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEMFRNGRCP 497
Query: 334 VMVATDVASKGLDFEEIKHVINTE 357
++VAT VA++GLD + HV+N +
Sbjct: 498 ILVATAVAARGLDIPNVTHVVNYD 521
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 75/213 (35%), Gaps = 44/213 (20%)
Query: 156 VEGDDVPPACCSFRLMKLPESLVRALEAKGIKKPTPIQVQGIPAALSEDVRTIFSFFRGQ 215
G DVP F L + L++ +E K PTP+Q IP + G
Sbjct: 176 ASGQDVPEPVLKFTNPPLDDHLIKNIELAHYKVPTPVQKYSIPIVM------------GG 223
Query: 216 RQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYVKQEAKIVYLLE 275
R + + T K F + P ++ + A
Sbjct: 224 RDLMACAQTGSGKTGGF------------------LFPILSQAFQTGPSPIPANAAGSFG 265
Query: 276 CLQKTEPPVLIFAEKKQDVDAIHE----YLLLKGVEAVAIHGGKDQEERTRSVESFRKGQ 331
+K P LI A ++ V I + + V ++GG D + R +E
Sbjct: 266 RTRKAYPTSLILAPTRELVSQIFDESRKFAYRSWVRPCVVYGGADIGSQLRQMER----G 321
Query: 332 KDVMVAT-----DVASKG-LDFEEIKHVINTEA 358
D++VAT D+ +G + + IK+++ EA
Sbjct: 322 CDLLVATPGRLVDLIERGRISLQNIKYLVLDEA 354
>sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2
Length = 1180
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 95/161 (59%), Gaps = 9/161 (5%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYV 264
V I + R RQT+LFSAT P+ ++ AR L KPI I VG GK + + + Q VE
Sbjct: 718 VMKIMANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVG--GKSVVAPEITQIVEVR 775
Query: 265 KQEAKIVYLLECL-------QKTEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQ 317
+ K V LLE L + + LIF ++++ DA+ L+ KG ++IHGGKDQ
Sbjct: 776 NDDQKFVRLLELLGNLYSSDENEDARALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQ 835
Query: 318 EERTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTEA 358
+R ++E F+ G V++AT VA++GLD +++K V+N +A
Sbjct: 836 IDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDA 876
>sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=PRP5 PE=3 SV=1
Length = 1064
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 96/159 (60%), Gaps = 7/159 (4%)
Query: 205 VRTIFSFFRGQRQTLLFSATMPKKIQNFARSALVKPITINVGRAGKIMPSMNVVQEVEYV 264
V IF+ R RQT+LFSATMP+ I + L +P+ I VG G+ + + + Q VE +
Sbjct: 600 VMKIFNNVRPDRQTILFSATMPRIIDALTKKVLREPVEIQVG--GRSVVAPEITQIVEIL 657
Query: 265 KQEAKIVYLLECLQK-----TEPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEE 319
+ K V LLE L + + LIF E+++ D + +L +G ++IHGGKDQE+
Sbjct: 658 DEGKKFVRLLELLGELYADDDDVRALIFVERQEKADDLLREVLRRGYGCMSIHGGKDQED 717
Query: 320 RTRSVESFRKGQKDVMVATDVASKGLDFEEIKHVINTEA 358
R ++ F+KG +M+AT VA++GLD +++K V+N +A
Sbjct: 718 RNSTISDFKKGVCPIMIATSVAARGLDVKQLKLVVNYDA 756
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 121 IQYNDPIKTSWRAPRCILSLP-DQVHDIIRRNLRILVEGDDVPPACCSFRLMKLPESLVR 179
I+ N K W P+ + + D + D+ I V G +VP + L ++
Sbjct: 383 IELNQIRKNFWVEPQELSQMTEDDIADLRLELDGIKVSGKNVPKPVQKWSQCGLTRPILD 442
Query: 180 ALEAKGIKKPTPIQVQGIPAALSEDVRTIFSFFR-GQRQTLLFSATMPKKIQNFARSALV 238
+E G +KPT IQ+Q +P +S R + + G +T+ F M + I++
Sbjct: 443 VVEGLGYEKPTSIQMQALPVIMSG--RDVIGVAKTGSGKTMAFVLPMLRHIKD------Q 494
Query: 239 KPITINVGRAGKIM 252
P+T + G IM
Sbjct: 495 DPVTGDDGAIALIM 508
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,328,461
Number of Sequences: 539616
Number of extensions: 5266222
Number of successful extensions: 32695
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 623
Number of HSP's that attempted gapping in prelim test: 26677
Number of HSP's gapped (non-prelim): 4849
length of query: 367
length of database: 191,569,459
effective HSP length: 119
effective length of query: 248
effective length of database: 127,355,155
effective search space: 31584078440
effective search space used: 31584078440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)