BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7792
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster
GN=abs PE=1 SV=1
Length = 619
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 101/139 (72%), Positives = 115/139 (82%), Gaps = 2/139 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVASKGLDF ++HVINYDMPDD+ENYVHRIGRTGRS GLATT INK+ ++SVL
Sbjct: 482 LVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVL 541
Query: 61 LDLKHLLLEARQRIPPFLAELESETE-KFLDLGGDERGCAYCGGLGHRITACPKLEAVQT 119
LDLKHLL+E +Q +P FL EL ETE + LDL GD GC YCGGLGHRIT CPKLEAVQ
Sbjct: 542 LDLKHLLIEGKQEVPDFLDELAPETEHQHLDL-GDSHGCTYCGGLGHRITECPKLEAVQN 600
Query: 120 KAASSIGRRDYLNSNQADY 138
K AS+IGRRDYL++ ADY
Sbjct: 601 KQASNIGRRDYLSNTAADY 619
>sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41
PE=1 SV=2
Length = 622
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVASKGLDF I+HVINYDMP+++ENYVHRIGRTGRSG TG+ATTFINK+ DESVL
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 545
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERGCAYCGGLGHRITACPKLEAVQTK 120
+DLK LLLEA+Q++PP L L E LD+GG ERGCA+CGGLGHRIT CPKLEA+QTK
Sbjct: 546 MDLKALLLEAKQKVPPVLQVLHCGDESMLDIGG-ERGCAFCGGLGHRITDCPKLEAMQTK 604
Query: 121 AASSIGRRDYLNSNQADY 138
S+IGR+DYL + D+
Sbjct: 605 QVSNIGRKDYLAHSSMDF 622
>sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens GN=DDX41
PE=1 SV=2
Length = 622
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVASKGLDF I+HVINYDMP+++ENYVHRIGRTGRSG TG+ATTFINK+ DESVL
Sbjct: 486 LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL 545
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERGCAYCGGLGHRITACPKLEAVQTK 120
+DLK LLLEA+Q++PP L L E LD+GG ERGCA+CGGLGHRIT CPKLEA+QTK
Sbjct: 546 MDLKALLLEAKQKVPPVLQVLHCGDESMLDIGG-ERGCAFCGGLGHRITDCPKLEAMQTK 604
Query: 121 AASSIGRRDYLNSNQADY 138
S+IGR+DYL + D+
Sbjct: 605 QVSNIGRKDYLAHSSMDF 622
>sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana
GN=RH35 PE=2 SV=1
Length = 591
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 91/136 (66%), Positives = 103/136 (75%), Gaps = 5/136 (3%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVASKGLDF +I+HVINYDMP ++ENYVHRIGRTGR GKTG+ATTFINK+ E+ L
Sbjct: 451 LVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTL 510
Query: 61 LDLKHLLLEARQRIPPFLAELE---SETEKFLDLGGDERGCAYCGGLGHRITACPKLEAV 117
LDLKHLL EA+QRIPP LAEL E E + G +GCAYCGGLGHRI CPKLE
Sbjct: 511 LDLKHLLQEAKQRIPPVLAELNDPMEEAETIANASG-VKGCAYCGGLGHRIRDCPKLEH- 568
Query: 118 QTKAASSIGRRDYLNS 133
Q A S R+DY S
Sbjct: 569 QKSVAISNSRKDYFGS 584
>sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis
thaliana GN=RH43 PE=3 SV=1
Length = 542
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 105/137 (76%), Gaps = 5/137 (3%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVASKGLDF +I+HVINYDMP ++ENYVHRIGRTGR GKTG+ATTFINK+ E L
Sbjct: 402 LVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITL 461
Query: 61 LDLKHLLLEARQRIPPFLAELE---SETEKFLDLGGDERGCAYCGGLGHRITACPKLEAV 117
LDLKHLL EA+QRIPP LAEL ETE + G +GCAYCGGLGHRI CPK E
Sbjct: 462 LDLKHLLQEAKQRIPPVLAELNGPMEETETIANASG-VKGCAYCGGLGHRILQCPKFEHQ 520
Query: 118 QTKAASSIGRRDYLNSN 134
++ A SS R+D+ S+
Sbjct: 521 KSVAISS-SRKDHFGSD 536
>sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp.
japonica GN=Os02g0150100 PE=2 SV=2
Length = 627
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 100/125 (80%), Gaps = 2/125 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVASKGLDF +I+HVINYDMP ++ENYVHRIGRTGR GKTG+ATTFINK+ E+ L
Sbjct: 487 LVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTL 546
Query: 61 LDLKHLLLEARQRIPPFLAELES--ETEKFLDLGGDERGCAYCGGLGHRITACPKLEAVQ 118
LDLKHLL EA+QRIPP LAEL E E+ + +GCAYCGGLGHR+T CPKLE +
Sbjct: 547 LDLKHLLKEAKQRIPPVLAELNDPLEDEETMAKESGVKGCAYCGGLGHRVTDCPKLEHQK 606
Query: 119 TKAAS 123
+ A +
Sbjct: 607 SMAIA 611
>sp|Q5Z6G5|RH35B_ORYSJ DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp.
japonica GN=Os06g0697200 PE=3 SV=1
Length = 619
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 99/134 (73%), Gaps = 4/134 (2%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVASKGLD +I+HVINYDMP ++ENYVHRIGRTGR GKTG+ATTFINK+ E+ L
Sbjct: 478 LVATDVASKGLDIPDIQHVINYDMPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTL 537
Query: 61 LDLKHLLLEARQRIPPFLAELESETEK---FLDLGGDERGCAYCGGLGHRITACPKLEAV 117
LDLK LL+E++QR+PP LA+L+ E + +GCA+CGGLGHRI ACPK + +
Sbjct: 538 LDLKQLLIESKQRLPPILADLDDPQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPK-QQL 596
Query: 118 QTKAASSIGRRDYL 131
Q + R DY
Sbjct: 597 QNSVTLARARSDYF 610
>sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium
discoideum GN=ddx41 PE=1 SV=1
Length = 671
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 102/150 (68%), Gaps = 18/150 (12%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVASKGLDF EI+HVIN+DMP ++ENY+HRIGRTGR G G+ATTFINK+N ES+L
Sbjct: 528 LVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFINKNNTESLL 587
Query: 61 LDLKHLLLEARQRIPPFLAELESET---EKFLDLGG---------DERGCAYCGGLGHRI 108
LDLK+LL+EA+Q++PP L E+ + +K D G D + C YC G GHR+
Sbjct: 588 LDLKYLLIEAKQKVPPALLEIPDDNQYLQKLQDRNGNTGGGADDDDTKPCEYCDGRGHRL 647
Query: 109 TACPKLEAVQTKAASSIGRRDYLNSNQADY 138
CPKL+ K A +RD+ S D+
Sbjct: 648 VNCPKLK----KQAGP--KRDFFGSGGGDW 671
>sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1
Length = 650
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HV+NYD+P D+++YVHRIGRTGR+G TG+AT F N+ N +++
Sbjct: 471 LVATAVAARGLDIPNVTHVVNYDLPSDIDDYVHRIGRTGRAGNTGVATAFFNRGN-RNIV 529
Query: 61 LDLKHLLLEARQRIPPFLAELESETEK 87
+ LL EA Q IPPFL ++ E+ +
Sbjct: 530 KGMYELLAEANQEIPPFLNDVMRESGR 556
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TGLAT F N+ N ++V+
Sbjct: 456 LVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGLATAFFNRGN-KNVV 514
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
+L +L EA Q +P FL+++ E
Sbjct: 515 KELVDILEEANQEVPSFLSQIAKE 538
>sp|P24784|DBP1_YEAST ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP1 PE=1 SV=2
Length = 617
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT+F N SN+++++
Sbjct: 465 LVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFN-SNNQNIV 523
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
L +L EA Q +P FL++L +
Sbjct: 524 KGLMEILNEANQEVPTFLSDLSRQ 547
>sp|A6ZWD3|DBP1_YEAS7 ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP1 PE=3 SV=1
Length = 617
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 65/84 (77%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT+F N SN+++++
Sbjct: 465 LVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFN-SNNQNIV 523
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
L +L EA Q +P FL++L +
Sbjct: 524 KGLMEILNEANQEVPTFLSDLSRQ 547
>sp|Q6GVM6|DDX3Y_PANTR ATP-dependent RNA helicase DDX3Y OS=Pan troglodytes GN=DDX3Y PE=2
SV=1
Length = 660
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD ++HVIN+D+P D+E YVHRIGRTGR G GLAT+F N+ N ++
Sbjct: 493 LVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN-INIT 551
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERGCAYCGGLGHR 107
DL LL+EA+Q +P +L + E + G + + GG G R
Sbjct: 552 KDLLDLLVEAKQEVPSWLENMAYEHQYKGGSRGRSKSNRFSGGFGAR 598
>sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DED1 PE=3 SV=1
Length = 617
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P DV++YVHRIGRTGR+G TG+AT F N+ N+ +++
Sbjct: 456 LVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGVATAFFNRDNN-NIV 514
Query: 61 LDLKHLLLEARQRIPPFL 78
L +L EA Q IPPFL
Sbjct: 515 KGLYEILEEANQEIPPFL 532
>sp|Q9VHP0|DDX3_DROME ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel
PE=1 SV=1
Length = 798
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD +KHVIN+D+P DVE YVHRIGRTGR G G+AT+F N+ N ++
Sbjct: 613 LVATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKN-RNIC 671
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
DL LL+E +Q IP F+ ++ S+
Sbjct: 672 SDLLELLIETKQEIPSFMEDMSSD 695
>sp|A6SEH9|DED1_BOTFB ATP-dependent RNA helicase ded1 OS=Botryotinia fuckeliana (strain
B05.10) GN=ded1 PE=3 SV=1
Length = 683
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD +KHV+NYD+P D+++YVHRIGRTGR+G TG++T F N+ N V
Sbjct: 499 LVATAVAARGLDIPNVKHVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRGN-RGVC 557
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
DL LL EA Q IP FL + E
Sbjct: 558 RDLIELLKEANQEIPSFLENIARE 581
>sp|O15523|DDX3Y_HUMAN ATP-dependent RNA helicase DDX3Y OS=Homo sapiens GN=DDX3Y PE=1 SV=2
Length = 660
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD ++HVIN+D+P D+E YVHRIGRTGR G GLAT+F N+ N ++
Sbjct: 493 LVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN-MNIT 551
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERGCAYCGGLGHR 107
DL LL+EA+Q +P +L + E G + + GG G R
Sbjct: 552 KDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGAR 598
>sp|A4RHF1|DED1_MAGO7 ATP-dependent RNA helicase DED1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DED1 PE=3 SV=2
Length = 671
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 60/78 (76%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F + ++ V
Sbjct: 503 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFDMKDNSGVA 562
Query: 61 LDLKHLLLEARQRIPPFL 78
+L ++L EA+Q IPPFL
Sbjct: 563 QELLNILKEAKQDIPPFL 580
>sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DED1 PE=3 SV=1
Length = 627
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVIN+D+P+D+++YVHRIGRTGR+G TG+ATTF N+ N ++V
Sbjct: 470 LVATAVAARGLDIPNVTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGN-KNVA 528
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
+L LL EA Q +P FL + E
Sbjct: 529 KELVSLLSEANQEVPSFLTTIMRE 552
>sp|Q62095|DDX3Y_MOUSE ATP-dependent RNA helicase DDX3Y OS=Mus musculus GN=Ddx3y PE=1 SV=2
Length = 658
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 8/110 (7%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD +KHVIN+D+P D+E YVHRIGRTGR G GLAT+F N+ N ++
Sbjct: 494 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERN-LNIT 552
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERG---CAYCGGLGHR 107
DL LL+EA+Q +P +L + E G RG + GG G R
Sbjct: 553 KDLLDLLVEAKQEVPSWLESMAYEHH----YKGSSRGRSKSRFSGGFGAR 598
>sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X PE=1 SV=3
Length = 662
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD +KHVIN+D+P D+E YVHRIGRTGR G GLAT+F N+ N ++
Sbjct: 495 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERN-INIT 553
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERGCAYCGGLGHR 107
DL LL+EA+Q +P +L + E G + + GG G R
Sbjct: 554 KDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR 600
>sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DED1 PE=3 SV=1
Length = 696
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HV+NYD+P D+++YVHRIGRTGR+G TG+AT F N+ N V+
Sbjct: 514 LVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN-RGVV 572
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
DL LL EA Q +P FL + E
Sbjct: 573 RDLLDLLKEANQEVPSFLESIARE 596
>sp|Q1DJF0|DED1_COCIM ATP-dependent RNA helicase DED1 OS=Coccidioides immitis (strain RS)
GN=DED1 PE=3 SV=2
Length = 665
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HV+NYD+P D+++YVHRIGRTGR+G TGL+T F N+ N V+
Sbjct: 496 LVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGLSTAFFNRGN-RGVV 554
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
DL LL EA Q +P FL + E
Sbjct: 555 RDLIELLKEAHQEVPAFLENIARE 578
>sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DED1 PE=3 SV=3
Length = 647
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G G+AT F N+ N+++V+
Sbjct: 479 LVATAVAARGLDIPNVAHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNR-NNKNVV 537
Query: 61 LDLKHLLLEARQRIPPFLAELESET 85
L LL EA Q +P FLA++ E+
Sbjct: 538 KGLIDLLSEANQEVPDFLAKIGRES 562
>sp|Q5RF43|DDX3Y_PONAB ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1
Length = 658
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD ++HVIN+D+P D+E YVHRIGRTGR G GLAT+F N+ N ++
Sbjct: 493 LVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN-MNIT 551
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERGCAYCGGLGHR 107
DL LL+EA+Q +P +L + E G R + GG G R
Sbjct: 552 KDLLDLLVEAKQEVPSWLENM--AYEHHYKGGSRGRSKRFSGGFGAR 596
>sp|Q62167|DDX3X_MOUSE ATP-dependent RNA helicase DDX3X OS=Mus musculus GN=Ddx3x PE=1 SV=3
Length = 662
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD +KHVIN+D+P D+E YVHRIGRTGR G GLAT+F N+ N ++
Sbjct: 495 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERN-INIT 553
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERGCAYCGGLGHR 107
DL LL+EA+Q +P +L + E G + + GG G R
Sbjct: 554 KDLLDLLVEAKQEVPSWLENMAFEHHYKGSSRGRSKSSRFSGGFGAR 600
>sp|Q9P6U9|DED1_NEUCR ATP-dependent RNA helicase ded-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ded-1 PE=3 SV=1
Length = 688
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F N+ N V+
Sbjct: 507 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN-RGVV 565
Query: 61 LDLKHLLLEARQRIPPFLAELESET 85
+L LL EA Q +P FL + E+
Sbjct: 566 RELLELLKEANQEVPAFLETIARES 590
>sp|P16381|DDX3L_MOUSE Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus GN=D1Pas1
PE=1 SV=1
Length = 660
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 8/110 (7%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD +KHVIN+D+P D+E YVHRIGRTGR G GLAT+F N+ N ++
Sbjct: 494 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNI-NIT 552
Query: 61 LDLKHLLLEARQRIPPFLAELESETEKFLDLGGDERGCA---YCGGLGHR 107
DL LL+EA+Q +P +L + E G RG + + GG G R
Sbjct: 553 KDLLDLLVEAKQEVPSWLENMAFEHH----YKGGSRGRSKSRFSGGFGAR 598
>sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=ded1 PE=3 SV=1
Length = 675
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F N+ N V+
Sbjct: 502 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN-RGVV 560
Query: 61 LDLKHLLLEARQRIPPFLAEL 81
DL LL EA Q +P FL +
Sbjct: 561 RDLIDLLKEAHQEVPSFLESI 581
>sp|Q4I7K4|DED1_GIBZE ATP-dependent RNA helicase DED1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DED1 PE=3
SV=1
Length = 675
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P DV++YVHRIGRTGR+G TG+AT F N+ N ++
Sbjct: 499 LVATAVAARGLDIPHVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGN-RGIV 557
Query: 61 LDLKHLLLEARQRIPPFLAELESET 85
+L LL EA Q +P FL + E+
Sbjct: 558 RELMDLLKEANQEVPAFLETIARES 582
>sp|C8V8H4|DED1_EMENI ATP-dependent RNA helicase ded1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ded1
PE=3 SV=1
Length = 668
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F N+ N V+
Sbjct: 500 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN-RGVV 558
Query: 61 LDLKHLLLEARQRIPPFLAEL 81
DL LL EA Q +P FL +
Sbjct: 559 RDLIDLLKEAHQEVPSFLESI 579
>sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ded1
PE=3 SV=1
Length = 674
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F N+SN V+
Sbjct: 504 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRSN-RGVV 562
Query: 61 LDLKHLLLEARQRIPPFLAEL 81
+L LL EA Q +P FL +
Sbjct: 563 RELIDLLKEAHQEVPSFLESI 583
>sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DED1 PE=3 SV=1
Length = 672
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G G+AT F N+ N+++V+
Sbjct: 497 LVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNR-NNKNVV 555
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
L LL EA Q +P FL ++ E
Sbjct: 556 KGLIELLSEANQEVPDFLTKIARE 579
>sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=ded1 PE=3 SV=1
Length = 678
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F N+ N V+
Sbjct: 503 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN-RGVV 561
Query: 61 LDLKHLLLEARQRIPPFLAEL 81
DL LL EA Q +P FL +
Sbjct: 562 RDLIDLLKEAHQEVPSFLESI 582
>sp|Q2HBE7|DED1_CHAGB ATP-dependent RNA helicase DED1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DED1 PE=3 SV=1
Length = 688
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P DV++YVHRIGRTGR+G TG+AT F N+ N ++
Sbjct: 510 LVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGN-RGIV 568
Query: 61 LDLKHLLLEARQRIPPFLAELESET 85
+L LL EA Q +P FL + E+
Sbjct: 569 RELLDLLKEANQEVPAFLETIARES 593
>sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp.
japonica GN=PL10B PE=2 SV=1
Length = 638
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVA++GLD + HVIN+D+P+D+++YVHRIGRTGR+GK+GLAT F N+SN +
Sbjct: 482 LVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESN-TPLA 540
Query: 61 LDLKHLLLEARQRIPPFL 78
L L+ EA Q +P +L
Sbjct: 541 RPLSELMQEANQEVPQWL 558
>sp|A7EJY3|DED1_SCLS1 ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=ded1 PE=3 SV=1
Length = 678
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HV+NYD+P D+++YVHRIGRTGR+G TG++T F N+ N V+
Sbjct: 499 LVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRGN-RGVV 557
Query: 61 LDLKHLLLEARQRIPPFLAEL 81
DL LL EA Q IP FL +
Sbjct: 558 RDLIELLKEANQEIPAFLENI 578
>sp|P24346|DDX3_XENLA Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis GN=an3
PE=2 SV=1
Length = 697
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD +KHVIN+D+P D+E YVHRIGRTGR G GLAT+F N+ N ++
Sbjct: 536 LVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN-INIT 594
Query: 61 LDLKHLLLEARQRIPPFLAELESE 84
DL LL+EA+Q +P +L + E
Sbjct: 595 KDLLDLLVEAKQEVPSWLENMAYE 618
>sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp.
japonica GN=Os11g0599500 PE=3 SV=1
Length = 623
Score = 96.3 bits (238), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/79 (51%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVA++GLD + HV+N+D+P+D+++YVHRIGRTGR+GK+GLAT F N+ N+ S+
Sbjct: 470 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE-NNSSMA 528
Query: 61 LDLKHLLLEARQRIPPFLA 79
L L+ E+ Q +P +L+
Sbjct: 529 RSLAELMQESNQEVPAWLS 547
>sp|Q0CLJ6|DED1_ASPTN ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=ded1 PE=3 SV=1
Length = 674
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA+ GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F N+ N V+
Sbjct: 502 LVATAVAASGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN-RGVV 560
Query: 61 LDLKHLLLEARQRIPPFLAEL 81
DL LL EA Q +P FL +
Sbjct: 561 RDLIDLLKEAHQEVPTFLESI 581
>sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DED1 PE=1 SV=2
Length = 604
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P DV++YVHRIGRTGR+G TGLAT F N N +++
Sbjct: 453 LVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSEN-SNIV 511
Query: 61 LDLKHLLLEARQRIPPFLAE 80
L +L EA Q +P FL +
Sbjct: 512 KGLHEILTEANQEVPSFLKD 531
>sp|A1CH78|DED1_ASPCL ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=ded1 PE=3 SV=1
Length = 681
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F N+ N V+
Sbjct: 505 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN-RGVV 563
Query: 61 LDLKHLLLEARQRIPPFLAEL 81
+L LL EA Q +P FL +
Sbjct: 564 RELIDLLKEAHQEVPSFLESI 584
>sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DED1 PE=3 SV=1
Length = 604
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P DV++YVHRIGRTGR+G TGLAT F N N +++
Sbjct: 453 LVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSEN-SNIV 511
Query: 61 LDLKHLLLEARQRIPPFLAE 80
L +L EA Q +P FL +
Sbjct: 512 KGLHEILTEANQEVPSFLKD 531
>sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ded1
PE=3 SV=1
Length = 676
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G TG+AT F N+ N V+
Sbjct: 506 LVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGN-RGVV 564
Query: 61 LDLKHLLLEARQRIPPFLAEL 81
+L LL EA Q +P FL +
Sbjct: 565 RELIDLLKEAHQEVPSFLESI 585
>sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana
GN=RH37 PE=2 SV=2
Length = 633
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVA++GLD + HV+N+D+P+D+++YVHRIGRTGR+GK+GLAT F N N S+
Sbjct: 472 LVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGN-TSLA 530
Query: 61 LDLKHLLLEARQRIPPFLAELESET 85
L L+ EA Q +P +L S +
Sbjct: 531 RPLAELMQEANQEVPEWLTRYASRS 555
>sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DED1 PE=3 SV=1
Length = 630
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + H++NYD+P D+++YVHRIGRTGR+G G+AT F N+ N+++++
Sbjct: 467 LVATAVAARGLDIPNVSHIVNYDLPSDIDDYVHRIGRTGRAGNIGIATAFFNR-NNKNIV 525
Query: 61 LDLKHLLLEARQRIPPFLAELESET 85
L LL EA Q IP FL ++ E+
Sbjct: 526 KGLVDLLTEANQEIPDFLNKIARES 550
>sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp.
japonica GN=Os06g0602400 PE=2 SV=2
Length = 602
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
MVATDVAS+GLD + HVINYD+P +E+YVHRIGRTGR+GK G AT F +S D S+
Sbjct: 405 MVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTES-DHSLA 463
Query: 61 LDLKHLLLEARQRIPPFLAE 80
L L+ EA+Q +P +L +
Sbjct: 464 KGLLELMTEAKQDVPDWLVQ 483
>sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DED1 PE=3 SV=1
Length = 664
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VAT VA++GLD + HVINYD+P D+++YVHRIGRTGR+G G+AT F N+ N+++++
Sbjct: 486 LVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNR-NNKNIV 544
Query: 61 LDLKHLLLEARQRIPPFLAELESET 85
+ LL EA Q +P FL ++ E+
Sbjct: 545 KGMLDLLTEANQEVPDFLNKIARES 569
>sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DED1 PE=3 SV=1
Length = 672
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
MVAT VA++GLD + HV+NYD+P DV++YVHRIGRTGR+G G AT F N+ N ++++
Sbjct: 504 MVATAVAARGLDIPNVTHVVNYDLPSDVDDYVHRIGRTGRAGNVGHATAFFNRGN-KNIV 562
Query: 61 LDLKHLLLEARQRIPPFLAELESET 85
DL LL EA Q +P +L + E+
Sbjct: 563 RDLIELLKEANQEVPQWLEAVARES 587
>sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp.
japonica GN=Os03g0708600 PE=2 SV=1
Length = 736
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 1 MVATDVASKGLDFEEIKHVINYDMPDDVENYVHRIGRTGRSGKTGLATTFINKSNDESVL 60
+VATDVA +G+D ++ HVINY+MP ++ Y HRIGRTGR+GK GLAT+F+ N + +
Sbjct: 632 LVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTD-IF 690
Query: 61 LDLKHLLLEARQRIPPFLAELES 83
DLK +L+++ +PP LA E+
Sbjct: 691 FDLKQMLIQSNSPVPPELARHEA 713
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,511,354
Number of Sequences: 539616
Number of extensions: 1962574
Number of successful extensions: 7424
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5841
Number of HSP's gapped (non-prelim): 1473
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)