BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7793
(316 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VJ87|CWC22_DROME Pre-mRNA-splicing factor CWC22 homolog OS=Drosophila melanogaster
GN=ncm PE=1 SV=3
Length = 1330
Score = 286 bits (732), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 189/305 (61%), Gaps = 76/305 (24%)
Query: 88 GKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVF 147
GKL+KRVQYMIEVL Q+RKD FKD V+ +L+LV E+D+FTHLM LD +T+DILNVF
Sbjct: 583 GKLDKRVQYMIEVLFQIRKDGFKDHQAVVPELELVEEDDQFTHLMMLDEATETEDILNVF 642
Query: 148 QYDPEYLMNEEKYTTLRREILGDEDE---------------------------------D 174
++D Y NE+KY L REILG +D D
Sbjct: 643 KFDDNYAENEDKYKGLSREILGSDDGSSSGSGSGSDSDSDSDGESGSDAEKKAEAGDIID 702
Query: 175 DEETNLVALRRTIYLTIHSSLDFEDCL--------------------------------- 201
ETNL+ALRRTIYLTI+SSLD+E+C
Sbjct: 703 STETNLIALRRTIYLTINSSLDYEECAHKLMKMQLKPGQEIELCHMFLDCCAEQRTYEKF 762
Query: 202 ----------INKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLS 251
INK+Y+ P E+IF+++Y T HRLD N+LRNV+KFFAH LFTDAI W VL
Sbjct: 763 YGLLAQRFCNINKIYIPPFEEIFKDTYQTTHRLDTNRLRNVSKFFAHLLFTDAISWDVLE 822
Query: 252 CIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRF 311
CI LNE++TTSS RIFIKILFQEL+EYMGL KLN K+KD +L ++ G+FP+DNP+NTRF
Sbjct: 823 CIQLNEDDTTSSSRIFIKILFQELAEYMGLGKLNAKLKDDVLVESIAGLFPKDNPRNTRF 882
Query: 312 AINFF 316
+INFF
Sbjct: 883 SINFF 887
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 57/67 (85%)
Query: 12 LVFHKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSK 71
L ++LRNV+KFFAH LFTDAI W VL CI LNE++TTSS RIFIKILFQEL+EYMGL K
Sbjct: 795 LDTNRLRNVSKFFAHLLFTDAISWDVLECIQLNEDDTTSSSRIFIKILFQELAEYMGLGK 854
Query: 72 LNQKIKD 78
LN K+KD
Sbjct: 855 LNAKLKD 861
>sp|Q08C72|CWC22_DANRE Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio GN=cwc22 PE=2
SV=1
Length = 985
Score = 260 bits (665), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 178/307 (57%), Gaps = 77/307 (25%)
Query: 87 KGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNV 146
+ +++KRVQYMIEV+ +RKD FKD P + E LDLV EED+FTH++ L+ +T+DILNV
Sbjct: 419 ESEIDKRVQYMIEVMFAIRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDEYNTEDILNV 478
Query: 147 FQYDPEYLMNEEKYTTLRREILGDEDE--------------------------------- 173
F+ DP +L NEEKY T++REIL +
Sbjct: 479 FKLDPNFLENEEKYKTIKREILDEGSSDSGDDAGGSGDDEDDDEEDEEAAAGEEQEKVTI 538
Query: 174 -DDEETNLVALRRTIYLTIHSSLDFEDC-------------------------------- 200
D E NLVA RRTIYL I SSLDFE+C
Sbjct: 539 FDQTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQRTYE 598
Query: 201 -----------LINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHV 249
L+ K Y+ E IF+E Y T+HRL+ NKLRNVA+ FAH L+TD++ W V
Sbjct: 599 KFFGLLAGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARIFAHLLYTDSVPWSV 658
Query: 250 LSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNT 309
L C+ ++E+ TTSS RIF+KILFQEL YMGL KLN+++KD L P EG+FPRDNP+NT
Sbjct: 659 LECVRMSEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDTTLQPFFEGLFPRDNPRNT 718
Query: 310 RFAINFF 316
RFAINFF
Sbjct: 719 RFAINFF 725
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 12 LVFHKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSK 71
L +KLRNVA+ FAH L+TD++ W VL C+ ++E+ TTSS RIF+KILFQEL YMGL K
Sbjct: 633 LETNKLRNVARIFAHLLYTDSVPWSVLECVRMSEDTTTSSSRIFVKILFQELCAYMGLPK 692
Query: 72 LNQKIKD 78
LN+++KD
Sbjct: 693 LNERLKD 699
>sp|Q8C5N3|CWC22_MOUSE Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus GN=Cwc22
PE=1 SV=1
Length = 908
Score = 257 bits (656), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 139/305 (45%), Positives = 175/305 (57%), Gaps = 78/305 (25%)
Query: 90 LEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQY 149
++KRVQYMIEV+ VRKD FKD P ++E LDLV E+D+FTH++ L+ + +D+LNVF+
Sbjct: 326 IDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKM 385
Query: 150 DPEYLMNEEKYTTLRREIL--GDEDE---------------------------------D 174
DP ++ NEEKY +++EIL GD D D
Sbjct: 386 DPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEDEEEEGEDEEGGQKVTIHD 445
Query: 175 DEETNLVALRRTIYLTIHSSLDFEDC---------------------------------- 200
E NLV+ RRTIYL I SSLDFE+C
Sbjct: 446 KTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYEKF 505
Query: 201 ---------LINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLS 251
++ K Y+ E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL
Sbjct: 506 FGLLAGRFCMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLE 565
Query: 252 CIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRF 311
CI L+EE TTSS RIF+KI FQEL EYMGL KLN ++KD L P EG+ PRDNP+NTRF
Sbjct: 566 CIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRF 625
Query: 312 AINFF 316
AINFF
Sbjct: 626 AINFF 630
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%)
Query: 12 LVFHKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSK 71
L +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL K
Sbjct: 538 LETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPK 597
Query: 72 LNQKIKD 78
LN ++KD
Sbjct: 598 LNARLKD 604
>sp|Q9HCG8|CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens GN=CWC22
PE=1 SV=3
Length = 908
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 176/306 (57%), Gaps = 77/306 (25%)
Query: 88 GKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVF 147
+++KRVQYMIEV+ VRKD FKD P ++E LDLV E+D+FTH++ L+ + +D+LNVF
Sbjct: 326 SEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVF 385
Query: 148 QYDPEYLMNEEKYTTLRREIL--GDEDE-------------------------------- 173
+ DP ++ NEEKY +++EIL GD D
Sbjct: 386 KMDPNFMENEEKYKAIKKEILDEGDTDSNTDQDAGSSEEDEEEEEEEGEEDEEGQKVTIH 445
Query: 174 DDEETNLVALRRTIYLTIHSSLDFEDC--------------------------------- 200
D E NLV+ RRTIYL I SSLDFE+C
Sbjct: 446 DKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEK 505
Query: 201 ----------LINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVL 250
++ K Y+ E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL
Sbjct: 506 FFGLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVL 565
Query: 251 SCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTR 310
CI L+EE TTSS RIF+KI FQEL EYMGL KLN ++KD L P EG+ PRDNP+NTR
Sbjct: 566 ECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTR 625
Query: 311 FAINFF 316
FAINFF
Sbjct: 626 FAINFF 631
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%)
Query: 12 LVFHKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSK 71
L +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL K
Sbjct: 539 LETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPK 598
Query: 72 LNQKIKD 78
LN ++KD
Sbjct: 599 LNARLKD 605
>sp|Q5RA93|CWC22_PONAB Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii GN=CWC22
PE=2 SV=1
Length = 908
Score = 256 bits (654), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 176/306 (57%), Gaps = 77/306 (25%)
Query: 88 GKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVF 147
+++KRVQYMIEV+ VRKD FKD P ++E LDLV E+D+FTH++ L+ + +D+LNVF
Sbjct: 326 SEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVF 385
Query: 148 QYDPEYLMNEEKYTTLRREIL--GDEDE-------------------------------- 173
+ DP ++ NEEKY +++EIL GD D
Sbjct: 386 KMDPNFMENEEKYKAIKKEILDEGDTDSNTDQDAGSSEEDEEEEEEEGEEDEEGQKVTIH 445
Query: 174 DDEETNLVALRRTIYLTIHSSLDFEDC--------------------------------- 200
D E NLV+ RRTIYL I SSLDFE+C
Sbjct: 446 DKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEK 505
Query: 201 ----------LINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVL 250
++ K Y+ E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL
Sbjct: 506 FFGLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVL 565
Query: 251 SCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTR 310
CI L+EE TTSS RIF+KI FQEL EYMGL KLN ++KD L P EG+ PRDNP+NTR
Sbjct: 566 ECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTR 625
Query: 311 FAINFF 316
FAINFF
Sbjct: 626 FAINFF 631
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%)
Query: 12 LVFHKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSK 71
L +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL K
Sbjct: 539 LETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPK 598
Query: 72 LNQKIKD 78
LN ++KD
Sbjct: 599 LNARLKD 605
>sp|Q52KN9|CWC22_XENLA Pre-mRNA-splicing factor CWC22 homolog OS=Xenopus laevis GN=cwc22
PE=2 SV=1
Length = 803
Score = 256 bits (653), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/307 (45%), Positives = 177/307 (57%), Gaps = 77/307 (25%)
Query: 87 KGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNV 146
+ +++KRVQYMIEV+ VRKD FKD P + E LDLV EED+FTH++ L+ + +D+LNV
Sbjct: 372 ESEIDKRVQYMIEVMFAVRKDGFKDHPVIPEGLDLVEEEDQFTHMLPLEDDYNQEDVLNV 431
Query: 147 FQYDPEYLMNEEKYTTLRREILGDEDEDDE------------------------------ 176
F+ DP++L NEEKY +++EIL + D D E
Sbjct: 432 FKMDPDFLENEEKYKAIKKEILDEGDSDSEGDANEGSEDESEEEEEDGQEAGTEGEKMTI 491
Query: 177 ----ETNLVALRRTIYLTIHSSLDFEDC-------------------------------- 200
E NLVA RRTIYL I SSLDFE+C
Sbjct: 492 HDKTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQRTYE 551
Query: 201 -----------LINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHV 249
L+ K Y+ E IF+E + T+HRL+ NKLRNVAK FAH L+TD++ W V
Sbjct: 552 KFFGLLAGRFCLLKKEYLEAFENIFKEQFETIHRLETNKLRNVAKMFAHLLYTDSLPWSV 611
Query: 250 LSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNT 309
L C++L+EE TTSS RIF+KI FQEL EYMGL KLN ++KD L P +G+ P DNPKNT
Sbjct: 612 LECMNLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDVTLQPFFQGLLPMDNPKNT 671
Query: 310 RFAINFF 316
RFAINFF
Sbjct: 672 RFAINFF 678
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 12 LVFHKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSK 71
L +KLRNVAK FAH L+TD++ W VL C++L+EE TTSS RIF+KI FQEL EYMGL K
Sbjct: 586 LETNKLRNVAKMFAHLLYTDSLPWSVLECMNLSEETTTSSSRIFVKIFFQELCEYMGLPK 645
Query: 72 LNQKIKD 78
LN ++KD
Sbjct: 646 LNARLKD 652
>sp|Q4WKB9|CWC22_ASPFU Pre-mRNA-splicing factor cwc22 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cwc22
PE=3 SV=1
Length = 881
Score = 254 bits (649), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 179/295 (60%), Gaps = 68/295 (23%)
Query: 90 LEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQY 149
++KRVQYMIEVL QVRKD +KD P + ++LDLV EED+ TH + LD DTQD LNVF+Y
Sbjct: 310 IDKRVQYMIEVLFQVRKDRYKDNPAIKDELDLVEEEDQITHRIGLDDEIDTQDGLNVFKY 369
Query: 150 DPEYLMNEEKYTTLRREILGD-------------------------EDEDDEETNLVALR 184
DP++ +EE Y L+ EILG+ E +D T+LV LR
Sbjct: 370 DPQWEEHEEAYKKLKAEILGEGSDDDEEDEDETDESSDEEEEERQMEIKDQSNTDLVNLR 429
Query: 185 RTIYLTIHSSLDFEDCL------------------------------------------- 201
RTIYLTI SS+DFE+C
Sbjct: 430 RTIYLTIMSSIDFEECCHKLMKISLPPGLEPELPSMIIECCSQERTYSKFYGLIGERFAK 489
Query: 202 INKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETT 261
IN+++ E F + Y T+HR + N+LRN+A+FF H L TDAIGWHV+S IHLNE+ETT
Sbjct: 490 INRLWSDLFEAAFAKYYDTIHRYETNRLRNIARFFGHMLSTDAIGWHVMSVIHLNEDETT 549
Query: 262 SSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
SS RIFIKILFQ+L E++GL+KL ++++D +L P+ EG+FP DNP+NTRF+IN+F
Sbjct: 550 SSSRIFIKILFQDLGEHLGLAKLQERMRDEILRPSFEGLFPLDNPRNTRFSINYF 604
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 57/64 (89%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
++LRN+A+FF H L TDAIGWHV+S IHLNE+ETTSS RIFIKILFQ+L E++GL+KL +
Sbjct: 515 NRLRNIARFFGHMLSTDAIGWHVMSVIHLNEDETTSSSRIFIKILFQDLGEHLGLAKLQE 574
Query: 75 KIKD 78
+++D
Sbjct: 575 RMRD 578
>sp|Q5ZKA3|CWC22_CHICK Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus GN=CWC22
PE=2 SV=2
Length = 926
Score = 248 bits (633), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/303 (45%), Positives = 171/303 (56%), Gaps = 74/303 (24%)
Query: 88 GKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVF 147
K++ RVQYMIEV+ VRKD FKD P + E LDLV EED+FTH++ L+ + +D+LNVF
Sbjct: 332 SKIDMRVQYMIEVMFAVRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDEYNPEDVLNVF 391
Query: 148 QYDPEYLMNEEKYTTLRREILGDEDEDDE------------------------------- 176
+ DP ++ NEEKY L++EIL + D + E
Sbjct: 392 KMDPNFMENEEKYKALKKEILDEGDSESEPDQEAGSSDEEEEEDEEEDEDGQKVTVHDKT 451
Query: 177 ETNLVALRRTIYLTIHSSLDFEDC------------------------------------ 200
E NLV TIYL I SSLDFE+C
Sbjct: 452 EINLVPSVGTIYLAIQSSLDFEECAHKLLKMDFPESQTKELCNMILDCCAQQRTYEKFFG 511
Query: 201 -------LINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCI 253
++ K Y+ E IF+E Y T+HRL+ NKLRNVAK FAH L+TD+I W VL CI
Sbjct: 512 LLAGRFCMLKKEYMESFEAIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECI 571
Query: 254 HLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAI 313
L+EE TTSS RIF+KI FQELSEYMGL LN ++KD L P EG+ PRDNP+NTRFAI
Sbjct: 572 ILSEETTTSSSRIFVKIFFQELSEYMGLPNLNARLKDITLQPFFEGLLPRDNPRNTRFAI 631
Query: 314 NFF 316
NFF
Sbjct: 632 NFF 634
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 53/67 (79%)
Query: 12 LVFHKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSK 71
L +KLRNVAK FAH L+TD+I W VL CI L+EE TTSS RIF+KI FQELSEYMGL
Sbjct: 542 LETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMGLPN 601
Query: 72 LNQKIKD 78
LN ++KD
Sbjct: 602 LNARLKD 608
>sp|P0CM96|CWC22_CRYNJ Pre-mRNA-splicing factor CWC22 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CWC22 PE=3 SV=1
Length = 831
Score = 237 bits (605), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 200/367 (54%), Gaps = 78/367 (21%)
Query: 22 KFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPFR 81
++ AH++ I +L C+ +++ F++ + Q LSE K N + + FR
Sbjct: 277 QYVAHEIVALQI---LLLCLDRPTDDSIEVAVGFMREVGQFLSE--NSPKANNTVFERFR 331
Query: 82 PVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQ 141
V +G++ KR QYMIEVL QVRKD +KD P V E LDLV EE++ TH +TLD Q
Sbjct: 332 AVLH-EGQISKRCQYMIEVLFQVRKDKYKDNPAVPEGLDLVEEEEQITHRVTLDDELQVQ 390
Query: 142 DILNVFQYDPEYLMNEEKYTTLRREILGDED----------------------------- 172
+ LN+F+ DP ++ NEE+Y ++REILGD D
Sbjct: 391 ESLNLFKADPNFVQNEERYNAIKREILGDSDDESGTESGSEYSESEDDEDEDVAPEKAGI 450
Query: 173 EDDEETNLVALRRTIYLTIHSSLDFED--------------------------------- 199
+D ETNL+ LRRTIYLTI +SL+FE+
Sbjct: 451 QDMTETNLINLRRTIYLTIMNSLNFEEAVHKLMKVNIPEGREIELCNMVIECCSQERTYS 510
Query: 200 ----------CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHV 249
C +++++ ++ F++ Y T+HR + NKLRN+ +FF H L +D I W V
Sbjct: 511 NFYGLIGERFCKLHRIWTDAFQEAFQKYYDTIHRYETNKLRNIGRFFGHLLASDGISWAV 570
Query: 250 LSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNT 309
L +H+NEEETTSS RIF+KI+ QE+ E MG++++ ++ + P L PA G+FP DNPKN
Sbjct: 571 LHVVHMNEEETTSSSRIFVKIVLQEMVEEMGINRVAERFRIPDLKPAFAGMFPMDNPKNA 630
Query: 310 RFAINFF 316
RF+IN+F
Sbjct: 631 RFSINYF 637
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
+KLRN+ +FF H L +D I W VL +H+NEEETTSS RIF+KI+ QE+ E MG++++ +
Sbjct: 548 NKLRNIGRFFGHLLASDGISWAVLHVVHMNEEETTSSSRIFVKIVLQEMVEEMGINRVAE 607
Query: 75 KIKDP 79
+ + P
Sbjct: 608 RFRIP 612
>sp|P0CM97|CWC22_CRYNB Pre-mRNA-splicing factor CWC22 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CWC22 PE=3
SV=1
Length = 831
Score = 237 bits (604), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 200/367 (54%), Gaps = 78/367 (21%)
Query: 22 KFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPFR 81
++ AH++ I +L C+ +++ F++ + Q LSE K N + + FR
Sbjct: 277 QYVAHEIVALQI---LLLCLDRPTDDSIEVAVGFMREVGQFLSE--NSPKANNTVFERFR 331
Query: 82 PVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQ 141
V +G++ KR QYMIEVL QVRKD +KD P V E LDLV EE++ TH +TLD Q
Sbjct: 332 AVL-HEGQISKRCQYMIEVLFQVRKDKYKDNPAVPEGLDLVEEEEQITHRVTLDDELQVQ 390
Query: 142 DILNVFQYDPEYLMNEEKYTTLRREILGDED----------------------------- 172
+ LN+F+ DP ++ NEE+Y ++REILGD D
Sbjct: 391 ESLNLFKADPNFVQNEERYNAIKREILGDSDDESGTESGSEYSESEDDEDEDVAPEKAGI 450
Query: 173 EDDEETNLVALRRTIYLTIHSSLDFED--------------------------------- 199
+D ETNL+ LRRTIYLTI +SL+FE+
Sbjct: 451 QDMTETNLINLRRTIYLTIMNSLNFEEAVHKLMKVNIPEGREIELCNMVIECCSQERTYS 510
Query: 200 ----------CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHV 249
C +++++ ++ F++ Y T+HR + NKLRN+ +FF H L +D I W V
Sbjct: 511 NFYGLIGERFCKLHRIWTDAFQEAFQKYYDTIHRYETNKLRNIGRFFGHLLASDGISWAV 570
Query: 250 LSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNT 309
L +H+NEEETTSS RIF+KI+ QE+ E MG++++ ++ + P L PA G+FP DNPKN
Sbjct: 571 LHVVHMNEEETTSSSRIFVKIVLQEMVEEMGINRVAERFRIPDLKPAFAGMFPMDNPKNA 630
Query: 310 RFAINFF 316
RF+IN+F
Sbjct: 631 RFSINYF 637
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
+KLRN+ +FF H L +D I W VL +H+NEEETTSS RIF+KI+ QE+ E MG++++ +
Sbjct: 548 NKLRNIGRFFGHLLASDGISWAVLHVVHMNEEETTSSSRIFVKIVLQEMVEEMGINRVAE 607
Query: 75 KIKDP 79
+ + P
Sbjct: 608 RFRIP 612
>sp|Q5BGP1|CWC22_EMENI Pre-mRNA-splicing factor cwc22 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc22
PE=3 SV=2
Length = 868
Score = 230 bits (587), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 177/295 (60%), Gaps = 68/295 (23%)
Query: 90 LEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQY 149
++KRVQYMIEVL QVRKD +KD P + E+LDLV EED+ TH + LD +TQD LN+F+Y
Sbjct: 310 IDKRVQYMIEVLFQVRKDRYKDNPAIKEELDLVEEEDQITHRIGLDDEIETQDGLNIFKY 369
Query: 150 DPEYLMNEEKYTTLRREILGDED-------------------------EDDEETNLVALR 184
DP++ +EE Y L+ EILG+ +D T+LV LR
Sbjct: 370 DPQWEEHEEAYKKLKAEILGEGSDDEDESGEDDESSDEESEEERQMDIKDQSNTDLVNLR 429
Query: 185 RTIYLTIHSSLDFEDCL------------------------------------------- 201
RTIYLTI SS+DFE+C
Sbjct: 430 RTIYLTIMSSIDFEECCHKLMKISLPAGLEPELPSMIIECCSQERTYSKFYGLIGERFAK 489
Query: 202 INKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETT 261
IN+++ E F + Y T+HR + N+LRN+A+FF H L TDA+GWHVLS IHLNEEETT
Sbjct: 490 INRLWSDLFENAFAKYYDTIHRYETNRLRNIARFFGHMLSTDALGWHVLSVIHLNEEETT 549
Query: 262 SSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
SS RIFIKILFQ+L+E++GL KL +++ D LL P+ EG+FP DNP+NTRF+IN+F
Sbjct: 550 SSSRIFIKILFQDLAEHLGLPKLRERMTDELLRPSFEGLFPTDNPRNTRFSINYF 604
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 56/64 (87%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
++LRN+A+FF H L TDA+GWHVLS IHLNEEETTSS RIFIKILFQ+L+E++GL KL +
Sbjct: 515 NRLRNIARFFGHMLSTDALGWHVLSVIHLNEEETTSSSRIFIKILFQDLAEHLGLPKLRE 574
Query: 75 KIKD 78
++ D
Sbjct: 575 RMTD 578
>sp|Q4PCY0|CWC22_USTMA Pre-mRNA-splicing factor CWC22 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=CWC22 PE=3 SV=1
Length = 886
Score = 227 bits (579), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 181/327 (55%), Gaps = 82/327 (25%)
Query: 71 KLNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTH 130
K N I D FR V ++G++ KRVQYMIEVL+QVR++ FK+ P + + LDLV E+D+ TH
Sbjct: 306 KANNSIFDRFRAVL-YEGEISKRVQYMIEVLSQVRREGFKENPRIPDALDLVEEDDQITH 364
Query: 131 LMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILGDEDEDDE-------------- 176
++LD + ++ LNVF+ DPE++ NEE+Y +++ EILG+ + D+
Sbjct: 365 RISLDDQLNIEEGLNVFKMDPEFVENEERYRSIKAEILGENSDSDKTGSEADSESGSSSD 424
Query: 177 ------------------------ETNLVALRRTIYLTIHSSLDFED------------- 199
ETNL+ LRRTIYLTI SSLDFE+
Sbjct: 425 DSSDDEAGEGPDDAQRQLEIHDRTETNLINLRRTIYLTIMSSLDFEESVHKLLKLEVPEG 484
Query: 200 ------------------------------CLINKMYVAPLEQIFRESYSTVHRLDINKL 229
C +++ + Q F Y T+HR + N+L
Sbjct: 485 QDIELCNMIVECCSQERTYSKFYGNMGERFCKLHRKWADTFAQSFSNYYDTIHRYETNRL 544
Query: 230 RNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIK 289
RN+A+FF H TD+I W +S IH+NEE+TTSS RIF+KI+FQE+ + +GL +L ++ K
Sbjct: 545 RNIARFFGHLFSTDSISWASMSVIHMNEEDTTSSSRIFVKIMFQEMQQQLGLKELAERFK 604
Query: 290 DPLLAPAMEGVFPRDNPKNTRFAINFF 316
+P L +G+FP DNPK+TRF+IN+F
Sbjct: 605 EPSLQENWKGLFPTDNPKSTRFSINYF 631
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
++LRN+A+FF H TD+I W +S IH+NEE+TTSS RIF+KI+FQE+ + +GL +L +
Sbjct: 542 NRLRNIARFFGHLFSTDSISWASMSVIHMNEEDTTSSSRIFVKIMFQEMQQQLGLKELAE 601
Query: 75 KIKDPFRPVARWKG 88
+ K+P WKG
Sbjct: 602 RFKEPSL-QENWKG 614
>sp|Q52B63|CWC22_MAGO7 Pre-mRNA-splicing factor CWC22 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=CWC22 PE=3 SV=1
Length = 907
Score = 221 bits (564), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 168/298 (56%), Gaps = 71/298 (23%)
Query: 90 LEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQY 149
+ KR QYMIEVL Q RKD FKD P + ++LDLV E+D+ H + LDG D QD LN+F++
Sbjct: 324 IAKRTQYMIEVLFQTRKDRFKDNPAIRDELDLVEEDDQIKHFVELDGELDAQDGLNIFKF 383
Query: 150 DPEYLMNEEKYTTLRREILGDED----------------------------EDDEETNLV 181
DPEY NEEKY L+ EILG+ +D +LV
Sbjct: 384 DPEYEENEEKYKKLKAEILGEGSDYEDDSDDEGSDSSDDEPAAAEQKAMDIQDRSNADLV 443
Query: 182 ALRRTIYLTIHSSLDFEDCL---------------------------------------- 201
ALRRTIYLT+ SS+D E+ +
Sbjct: 444 ALRRTIYLTLMSSMDPEEAVHKLMKINLPQGLEGELPSLVVESCAQERTYSKFYGAIGER 503
Query: 202 ---INKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEE 258
IN+++ E+ F Y+++HR + N+LRN+A+FF H +DAIGWH LS IHLNEE
Sbjct: 504 LAKINRLWTDLFEKSFEHYYTSIHRYETNRLRNIARFFGHMFSSDAIGWHCLSVIHLNEE 563
Query: 259 ETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
ETTS+ RIFIKILFQE+SE MG+ KL+ + KD L P MEG+FPRD +N RF+IN+F
Sbjct: 564 ETTSASRIFIKILFQEISEAMGMPKLHTRTKDAALQPYMEGLFPRDTARNIRFSINYF 621
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
++LRN+A+FF H +DAIGWH LS IHLNEEETTS+ RIFIKILFQE+SE MG+ KL+
Sbjct: 532 NRLRNIARFFGHMFSSDAIGWHCLSVIHLNEEETTSASRIFIKILFQEISEAMGMPKLHT 591
Query: 75 KIKD 78
+ KD
Sbjct: 592 RTKD 595
>sp|Q17336|CWC22_CAEEL Pre-mRNA-splicing factor CWC22 homolog OS=Caenorhabditis elegans
GN=let-858 PE=2 SV=1
Length = 897
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 194/378 (51%), Gaps = 81/378 (21%)
Query: 19 NVAKFFAHQLFTDAIGWHVLSC---IHLNEEETTSSGRIFIKILFQELSEYM-----GLS 70
NV KF AH L + VL+ I + EE T S + I L + ++ + L+
Sbjct: 286 NVIKFIAH-LINQQVAHEVLALEIMILMLEEPTDDSVEVAIAFLKECGAKLLEIAPAALN 344
Query: 71 KLNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTH 130
+ +++ R + L++R+QYMIE Q+RKD F +P VIEDLDL+ EED+ H
Sbjct: 345 SVYDRLRAILMETERSENALDRRIQYMIETAMQIRKDKFAAYPAVIEDLDLIEEEDQIIH 404
Query: 131 LMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILGDEDE----------------- 173
+ L+ D ++ LNVF+ DPE+ NEE Y +R+EI+G+ D
Sbjct: 405 TLNLEDAVDPENGLNVFKLDPEFEKNEEVYEEIRKEIIGNADISDEDGGDELDDEEEGSD 464
Query: 174 ------------DDEETNLVALRRTIYLTIHSSLDFED---------------------- 199
D+ + NL A RR +YLT+ SSLD+++
Sbjct: 465 VEEAPKKTTEIIDNTDQNLTAFRREVYLTMQSSLDYQEAAHKLLKMKIPDSMQNELCAML 524
Query: 200 ---------------------CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAH 238
C + Y E++ +++YST+HR+DI KLRN+A+ AH
Sbjct: 525 VDCCAQQRTYERFYGMLIERFCRLRLEYQQYFEKLCQDTYSTIHRIDITKLRNLARLIAH 584
Query: 239 QLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAME 298
L TDAI W +L+ + + EE+TTSSGRI+IK +F EL E MG+ KL+ ++ DP LA
Sbjct: 585 LLSTDAIDWKILADMKMTEEDTTSSGRIYIKYIFNELVEAMGMVKLHSRVTDPTLAHCFV 644
Query: 299 GVFPRDNPKNTRFAINFF 316
G+FPR NP + RF+INFF
Sbjct: 645 GLFPRTNPNSARFSINFF 662
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 48/64 (75%)
Query: 16 KLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQK 75
KLRN+A+ AH L TDAI W +L+ + + EE+TTSSGRI+IK +F EL E MG+ KL+ +
Sbjct: 574 KLRNLARLIAHLLSTDAIDWKILADMKMTEEDTTSSGRIYIKYIFNELVEAMGMVKLHSR 633
Query: 76 IKDP 79
+ DP
Sbjct: 634 VTDP 637
>sp|Q7RX84|CWC22_NEUCR Pre-mRNA-splicing factor cwc-22 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=cwc-22 PE=3 SV=1
Length = 1010
Score = 217 bits (552), Expect = 1e-55, Method: Composition-based stats.
Identities = 129/310 (41%), Positives = 173/310 (55%), Gaps = 72/310 (23%)
Query: 78 DPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGV 137
D FR + + +++R QYMIEVL QVRKD +KD P + E+LDLV EED+ TH + LD
Sbjct: 376 DQFRNILH-EADIDRRTQYMIEVLFQVRKDKYKDNPVIKEELDLVEEEDQITHRIGLDDE 434
Query: 138 KDTQDILNVFQYDPEYLMNEEKYTTLRREILGD--------------------------- 170
D QD LNVF+ DP + NEE+Y L+ EILG+
Sbjct: 435 IDPQDGLNVFKMDPNWEENEEEYKKLKAEILGEASDDDEDDDDDDESESGSESEDEEQKA 494
Query: 171 -EDEDDEETNLVALRRTIYLTIHSSLDFEDCL---------------------------- 201
E +D +LV LRRTIYL+I SS D E+
Sbjct: 495 LEIKDQSNADLVNLRRTIYLSIQSSADPEEAAHKLMKLRLPAGQEAELVSMIVESCAQEK 554
Query: 202 ---------------INKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIG 246
+N+M++ E+ F + YST+HR + NKLRN+A+FF H L TDAIG
Sbjct: 555 VYLKFMGLLGERFARLNRMWMDLFEESFAKYYSTIHRYETNKLRNIARFFGHLLATDAIG 614
Query: 247 WHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNP 306
WHV S IHLNEEETTS+ RIFIKILF++L E +G +KL ++ + L P+++G+FP D P
Sbjct: 615 WHVFSVIHLNEEETTSASRIFIKILFEDLQENIGSAKLKARMSEETLQPSLQGIFPHDEP 674
Query: 307 KNTRFAINFF 316
+N RF+IN+F
Sbjct: 675 RNIRFSINYF 684
Score = 92.4 bits (228), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/64 (64%), Positives = 52/64 (81%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
+KLRN+A+FF H L TDAIGWHV S IHLNEEETTS+ RIFIKILF++L E +G +KL
Sbjct: 595 NKLRNIARFFGHLLATDAIGWHVFSVIHLNEEETTSASRIFIKILFEDLQENIGSAKLKA 654
Query: 75 KIKD 78
++ +
Sbjct: 655 RMSE 658
>sp|Q9P6R9|CWC22_SCHPO Pre-mRNA-splicing factor cwf22 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf22 PE=1 SV=3
Length = 887
Score = 214 bits (546), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 197/372 (52%), Gaps = 79/372 (21%)
Query: 20 VAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMG--LSKLNQKIK 77
+A ++ + +G +L+ L E T S I + +L +E+ Y+ ++ +
Sbjct: 221 IAHLINQKIAHEIVGLQILAV--LLERPTNDSIEIAV-MLLREIGAYLAEVSTRAYNGVF 277
Query: 78 DPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGV 137
+ FR + +G+LE+R Q++IEVL Q RKD FK+ P + ++LDLV EED+ TH ++LD
Sbjct: 278 ERFRTILH-EGQLERRTQFIIEVLFQTRKDKFKNNPTIPQELDLVEEEDQITHYISLDDN 336
Query: 138 KDTQDILNVFQYDPEYLMNEEKYTTLRREILGD-------------------------ED 172
D Q+ L +F YDP+Y NE+KY ++ EILG+ D
Sbjct: 337 LDVQESLGIFHYDPDYEENEKKYDAIKHEILGEEDDDENEEDEEDSEETSESEEDESVND 396
Query: 173 E-----DDEETNLVALRRTIYLTIHSSLDFEDCL-------------------------- 201
E D +LV LR++IYLTI SS+DFE+C
Sbjct: 397 EKPQVIDQTNASLVNLRKSIYLTIMSSVDFEECCHKLLKIDLPEGQEIELCNMVIECNSQ 456
Query: 202 -----------------INKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDA 244
+++ + + EQ F+ Y T+HR + N+LRN+A FFA+ L TD+
Sbjct: 457 ERTYAKFYGLIGERFCKLSRTWRSTYEQCFKNYYETIHRYETNRLRNIALFFANLLSTDS 516
Query: 245 IGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRD 304
IGW V C+ L E++TT+S RIF+KI+FQE+ E +GL L +++ DP L P + G+FP D
Sbjct: 517 IGWEVYDCVRLTEDDTTASSRIFLKIMFQEIVEALGLKSLVERLHDPNLVPYLHGLFPVD 576
Query: 305 NPKNTRFAINFF 316
+N RF+IN+F
Sbjct: 577 EARNVRFSINYF 588
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
++LRN+A FFA+ L TD+IGW V C+ L E++TT+S RIF+KI+FQE+ E +GL L +
Sbjct: 499 NRLRNIALFFANLLSTDSIGWEVYDCVRLTEDDTTASSRIFLKIMFQEIVEALGLKSLVE 558
Query: 75 KIKDP 79
++ DP
Sbjct: 559 RLHDP 563
>sp|Q6C8C5|CWC22_YARLI Pre-mRNA-splicing factor CWC22 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CWC22 PE=3 SV=1
Length = 954
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 152/323 (47%), Gaps = 94/323 (29%)
Query: 88 GKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVF 147
G+LEKR QYMIE L Q+RKD ++++P V E+LDLV EED TH+ LD +LN F
Sbjct: 387 GELEKRTQYMIETLFQIRKDGYENYPVVQEELDLVDEEDYVTHMTGLDDKFTDDKLLNYF 446
Query: 148 QYDPEYLMNEEKYTTLRREILGDED----------------------------------E 173
DP+Y NEEKY L++EILGD D
Sbjct: 447 VMDPDYEANEEKYDLLKKEILGDSDDEEEDDSEAEEEADDEEEEEGDEEEEAQASTSAVR 506
Query: 174 DDEETNLVALRRTIYLTIHSSLDFE----------------------------------- 198
D T L LR+ IYLT+ S++ +
Sbjct: 507 DLTGTELATLRKKIYLTVMSTMSIDEIVHKLVKLSRTVIEIPEGLPEDQALILRLKRTQE 566
Query: 199 ------DC-----LINKMYVAPLEQIFRES--------------YSTVHRLDINKLRNVA 233
+C + NK+Y E++ R S YS +HR + N++RN+A
Sbjct: 567 VTNMLVECCAQEKIYNKIYGGTGERLLRLSREWRTNFENTFGFFYSVIHRYEPNQIRNIA 626
Query: 234 KFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLL 293
FF + L +D++ W VL + L EE++ S RIF+KI+F E+ + +G+ L +++ P +
Sbjct: 627 TFFGYLLASDSLSWKVLEAVSLTEEDSNPSNRIFLKIMFTEMRQELGMDLLKERLSKPFV 686
Query: 294 APAMEGVFPRDNPKNTRFAINFF 316
+ G+FP+ N + RFAIN+F
Sbjct: 687 QQYIAGMFPKTNASHVRFAINYF 709
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
+++RN+A FF + L +D++ W VL + L EE++ S RIF+KI+F E+ + +G+ L +
Sbjct: 620 NQIRNIATFFGYLLASDSLSWKVLEAVSLTEEDSNPSNRIFLKIMFTEMRQELGMDLLKE 679
Query: 75 KIKDPF 80
++ PF
Sbjct: 680 RLSKPF 685
>sp|Q6BU84|CWC22_DEBHA Pre-mRNA-splicing factor CWC22 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CWC22 PE=3 SV=2
Length = 637
Score = 148 bits (374), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 170/353 (48%), Gaps = 85/353 (24%)
Query: 45 EEETTSSGRIFIKILFQELSEYMGLSKL--NQKIKDPFRPVARWKGKLEKRVQYMIEVLA 102
E T S I ++I+ Q + +Y+ + + N I + R + + R Q++IE L
Sbjct: 172 ENPTNDSIEICVEIMNQ-VGKYLQENSVAANNMIFNRLRSILHENEDINDRSQFLIENLF 230
Query: 103 QVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQYDPEYLMNEEKYTT 162
+ RK+ + ++P + ++LDLV +D+ THL+ LD + D LN+FQ+D +Y NE+ Y
Sbjct: 231 KTRKNGYSEYPIIRKELDLVDLDDQETHLLELDAKVKSNDQLNIFQFDEQYDENEKLYDN 290
Query: 163 LRREILGD---------------------EDEDDEETNLVALRRTIYLTIHSSLDFED-- 199
+R++ILGD E +D E+NL+ ++T+YLT+ SS+ ++
Sbjct: 291 VRKDILGDSDEEDDESEAEESEEDNKEILEIKDMTESNLLNYQKTVYLTVMSSMSSDEAV 350
Query: 200 -----------------------------------------------CLINKMYVAPLEQ 212
C +NK +
Sbjct: 351 HKLIKLNFKKSNEEKYKNNEILVDMIIKCCSQEKTYSKYYGVIGEKLCSMNKSWHTIFID 410
Query: 213 IFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIG----WHVLSCIHLNEEETTSSGRIFI 268
F++ YST+H+ + N LRN+ KFF H +D + W+V I L EEET S+ RIFI
Sbjct: 411 TFKKYYSTIHQFETNSLRNIGKFFGHLFASDKLAIERSWNV---IRLTEEETNSASRIFI 467
Query: 269 KILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRD-----NPKNTRFAINFF 316
K +FQE+ E +G+ L +++ D L+ G+FPR N ++ RF+INFF
Sbjct: 468 KFIFQEMIEEIGIKGLQERLDDDLIRQETNGLFPRQGVTYRNAEDIRFSINFF 520
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 15 HKLRNVAKFFAHQLFTDAIG----WHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLS 70
+ LRN+ KFF H +D + W+V I L EEET S+ RIFIK +FQE+ E +G+
Sbjct: 425 NSLRNIGKFFGHLFASDKLAIERSWNV---IRLTEEETNSASRIFIKFIFQEMIEEIGIK 481
Query: 71 KLNQKIKD 78
L +++ D
Sbjct: 482 GLQERLDD 489
>sp|A8WT19|CWC22_CAEBR Pre-mRNA-splicing factor CWC22 homolog OS=Caenorhabditis briggsae
GN=let-858 PE=3 SV=2
Length = 935
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 84/117 (71%)
Query: 200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
C + Y E++ +++Y+TVHR+DI KLRN+A+ AH L TDAI W +L+ + + EE+
Sbjct: 578 CRLRLEYQQCFEKLCQDTYATVHRIDITKLRNLARLVAHLLSTDAIEWKILADVKMTEED 637
Query: 260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
TTS+GRI+IK +F EL E MG+ KL+ ++ DP LA G+FPR +P++ RFAINFF
Sbjct: 638 TTSAGRIYIKFIFMELVEAMGMVKLHTRVTDPTLAHCFVGMFPRTDPQDARFAINFF 694
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 110/218 (50%), Gaps = 37/218 (16%)
Query: 19 NVAKFFAHQLFTDAIGWHVLSC---IHLNEEETTSSGRIFIKILFQELSEYM-----GLS 70
NV KF AH L + VL+ I + EE T S + I L + ++ M L+
Sbjct: 304 NVIKFIAH-LINQQVAHEVLALEIMILMLEEPTDDSVEVAIAFLKECGAKLMEIAPAALN 362
Query: 71 KLNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTH 130
+ +++ R + L++R+QYMIE Q+RKD F +P V+EDLDL+ EED+ H
Sbjct: 363 SVYDRLRAILMETERSENALDRRIQYMIETAMQIRKDKFAAYPAVVEDLDLIEEEDQIIH 422
Query: 131 LMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILGDED------------------ 172
+ L+ D ++ LNVF+ DPE+ NE Y +R+EI+GD D
Sbjct: 423 TLNLEDAVDPENGLNVFKLDPEFEKNENVYEEIRKEIIGDADISSDEEEEVEDDDEESEA 482
Query: 173 ----------EDDEETNLVALRRTIYLTIHSSLDFEDC 200
D+ + NL A RR +YLT+ SSLD+++
Sbjct: 483 EEAPRKTTEIIDNTDQNLTAFRREVYLTLQSSLDYQEA 520
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 16 KLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQK 75
KLRN+A+ AH L TDAI W +L+ + + EE+TTS+GRI+IK +F EL E MG+ KL+ +
Sbjct: 606 KLRNLARLVAHLLSTDAIEWKILADVKMTEEDTTSAGRIYIKFIFMELVEAMGMVKLHTR 665
Query: 76 IKDP 79
+ DP
Sbjct: 666 VTDP 669
>sp|Q751P4|CWC22_ASHGO Pre-mRNA-splicing factor CWC22 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CWC22
PE=3 SV=1
Length = 554
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 61/286 (21%)
Query: 88 GKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLD----GVKDTQDI 143
GKL I+ L ++R+ N+K +P+ TH +TL+ +
Sbjct: 176 GKLSPTSSNRIQELLRLRRSNYKGQATKFS----LPDHGVCTHRVTLELDIPARLEPDSS 231
Query: 144 LNVFQYDPEYLMNEEKYTTLRRE----ILGDEDEDDEE----TNL--VALRRTIYLTIHS 193
L F D ++ EE++ LRR+ LG + + E TN V ++ IYL +
Sbjct: 232 LGKFYVDNQFFDTEERFAALRRQALERFLGQQQQQAEPVKDMTNAEEVQYKKQIYLILKG 291
Query: 194 SLDFED-------------------------------------------CLINKMYVAPL 210
SL ++ C ++ +
Sbjct: 292 SLTGDEAAHKLLKLRPDASQKATIVEIVVKACAQEQTYTKFYGILAERLCGSHRNWPTSF 351
Query: 211 EQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKI 270
+FR+ Y T+H + N+LRN+ KF+ H L D IG ++ C+HL+E TT S R+F+K
Sbjct: 352 TNLFRDLYGTLHEFEPNQLRNMGKFWGHMLAADHIGLNLFECVHLSEHRTTPSSRVFLKF 411
Query: 271 LFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
+FQEL +G++++ ++++D P ++G+FP++ +T FAIN+F
Sbjct: 412 IFQELVADLGIAEVRKRLEDENAQPLVQGLFPKEGNADTVFAINYF 457
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 46/64 (71%)
Query: 15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
++LRN+ KF+ H L D IG ++ C+HL+E TT S R+F+K +FQEL +G++++ +
Sbjct: 368 NQLRNMGKFWGHMLAADHIGLNLFECVHLSEHRTTPSSRVFLKFIFQELVADLGIAEVRK 427
Query: 75 KIKD 78
+++D
Sbjct: 428 RLED 431
>sp|Q59XY0|CWC22_CANAL Pre-mRNA-splicing factor CWC22 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CWC22 PE=3 SV=1
Length = 648
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 212 QIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGW-HVLSCIHLNEEETTSSGRIFIKI 270
++F+ Y + + N LRN+ KFF H +D + S I L E++T + RI +K
Sbjct: 417 KLFKYYYDIIENFETNSLRNLGKFFGHLFASDKLALDQAWSNIKLTEQDTNPAKRILLKF 476
Query: 271 LFQELSEYMGLSKLNQK-IKDPLLAPAMEGVFPRDN-----PKNTRFAINFF 316
+FQE+ E +G++++ ++ I D L P ++G+FP N RF+INFF
Sbjct: 477 IFQEMIEELGINEVKERLINDDYLKPYIKGIFPVINVDGKDADAIRFSINFF 528
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 70/126 (55%), Gaps = 22/126 (17%)
Query: 98 IEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQYDPEYLMNE 157
IE + ++ +++FK+ + LDLV EDK TH++TL+ ++D LNVF D EYL +E
Sbjct: 222 IEYILKLARNDFKNISIIKNGLDLVETEDKETHVITLEDKLYSRDHLNVFSVDEEYLDHE 281
Query: 158 EKYTTLRREILGDEDEDDEETN----------------------LVALRRTIYLTIHSSL 195
+Y L++EILG+ D +DE N L+ ++T+YLTI SS+
Sbjct: 282 NEYIELKKEILGETDHEDENENEIQVIETTKNYEEKITDMSQSELLQYQKTVYLTIMSSM 341
Query: 196 DFEDCL 201
++ +
Sbjct: 342 SSDEAV 347
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 15 HKLRNVAKFFAHQLFTDAIGW-HVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLN 73
+ LRN+ KFF H +D + S I L E++T + RI +K +FQE+ E +G++++
Sbjct: 432 NSLRNLGKFFGHLFASDKLALDQAWSNIKLTEQDTNPAKRILLKFIFQEMIEELGINEVK 491
Query: 74 QKI--KDPFRP 82
+++ D +P
Sbjct: 492 ERLINDDYLKP 502
>sp|P53333|CWC22_YEAST Pre-mRNA-splicing factor CWC22 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CWC22 PE=1 SV=1
Length = 577
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 182 ALRRTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYST-VHRLDINKLRNVAKFFAHQL 240
+L+ + + +S L ++ + + F ++Y+ + + ++LR + KF+ H +
Sbjct: 333 SLQESTFSKFYSILSERMITFHRSWQTAYNETFEQNYTQDIEDYETDQLRILGKFWGHLI 392
Query: 241 FTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGV 300
+ + L I L EEE+ GRIFIK LFQEL +GL +L ++ + ++G+
Sbjct: 393 SYEFLPMDCLKIIKLTEEESCPQGRIFIKFLFQELVNELGLDELQLRLN----SSKLDGM 448
Query: 301 FP-RDNPKNTRFAINFF 316
FP + ++ R++INFF
Sbjct: 449 FPLEGDAEHIRYSINFF 465
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 16 KLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQK 75
+LR + KF+ H + + + L I L EEE+ GRIFIK LFQEL +GL +L +
Sbjct: 380 QLRILGKFWGHLISYEFLPMDCLKIIKLTEEESCPQGRIFIKFLFQELVNELGLDELQLR 439
Query: 76 I 76
+
Sbjct: 440 L 440
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,038,881
Number of Sequences: 539616
Number of extensions: 5007973
Number of successful extensions: 13788
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 13695
Number of HSP's gapped (non-prelim): 82
length of query: 316
length of database: 191,569,459
effective HSP length: 117
effective length of query: 199
effective length of database: 128,434,387
effective search space: 25558443013
effective search space used: 25558443013
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)