AmiGO: BLAST Results


BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Homo sapiens	6.1e-69
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Gallus gallus	1.5e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Uncharacterized protein	protein from Bos taurus	2.2e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Uncharacterized protein	protein from Sus scrofa	2.3e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Homo sapiens	3.9e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Homo sapiens	3.9e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Pongo abelii	1.0e-67
BLAST match view associations BLAST with ncm ncm ncm nucampholin	protein from Drosophila melanogaster	1.7e-67
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Gallus gallus	2.8e-66
BLAST match view associations BLAST with cwc22 cwc22 cwc22 CWC22 spliceosome-associated protein homolog (S. cerevisiae)	gene_product from Danio rerio	1.1e-62
BLAST match view associations BLAST with Cwc22 Cwc22 Cwc22 CWC22 spliceosome-associated protein homolog (S. cerevisiae)	gene from Rattus norvegicus	2.7e-61
BLAST match view associations BLAST with Cwc22 Cwc22 Cwc22 CWC22 spliceosome-associated protein homolog (S. cerevisiae)	protein from Mus musculus	2.8e-61
BLAST match view associations BLAST with cwc22 cwc22 cwc22 Pre-mRNA-splicing factor CWC22 homolog	protein from Xenopus laevis	5.7e-60
BLAST match view associations BLAST with AT1G80930 AT1G80930 AT1G80930	protein from Arabidopsis thaliana	3.9e-54
BLAST match view associations BLAST with let-858 let-858 let-858	gene from Caenorhabditis elegans	5.3e-52
BLAST match view associations BLAST with let-858 let-858 let-858 Pre-mRNA-splicing factor CWC22 homolog	protein from Caenorhabditis elegans	5.3e-52
BLAST match view associations BLAST with DDB_G0267796 DDB_G0267796 DDB_G0267796 initiation factor eIF-4 gamma, MA3 domain-containing protein	gene from Dictyostelium discoideum	3.3e-48
BLAST match view associations BLAST with PFL1855w PFL1855w PFL1855w cell cycle control protein, putative	gene from Plasmodium falciparum	8.0e-46
BLAST match view associations BLAST with PFL1855w PFL1855w PFL1855w Cell cycle control protein, putative	protein from Plasmodium falciparum 3D7	8.0e-46
BLAST match view associations BLAST with CWC22 CWC22 CWC22	gene_product from Candida albicans	1.1e-21
BLAST match view associations BLAST with LOC680519 LOC680519 LOC680519 similar to CG12750-PA	gene from Rattus norvegicus	1.3e-20
BLAST match view associations BLAST with AT1G52325 AT1G52325 AT1G52325	protein from Arabidopsis thaliana	2.3e-10
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Spliceosome-associated protein that is required for pre-mRNA splicing	gene from Saccharomyces cerevisiae	6.1e-09
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy7793
        (316 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|B7WP74 - symbol:CWC22 "Pre-mRNA-splicing factor...   411  6.1e-69   3
UNIPROTKB|F1NI57 - symbol:CWC22 "Pre-mRNA-splicing factor...   410  1.5e-68   3
UNIPROTKB|F1MWG3 - symbol:CWC22 "Uncharacterized protein"...   413  2.2e-68   3
UNIPROTKB|F1RYP5 - symbol:CWC22 "Uncharacterized protein"...   413  2.3e-68   3
UNIPROTKB|J9P9J1 - symbol:CWC22 "Uncharacterized protein"...   413  2.4e-68   3
UNIPROTKB|E2RIF6 - symbol:CWC22 "Uncharacterized protein"...   413  2.5e-68   3
UNIPROTKB|B7WP27 - symbol:CWC22 "Pre-mRNA-splicing factor...   411  3.9e-68   3
UNIPROTKB|Q9HCG8 - symbol:CWC22 "Pre-mRNA-splicing factor...   411  3.9e-68   3
UNIPROTKB|Q5RA93 - symbol:CWC22 "Pre-mRNA-splicing factor...   411  1.0e-67   3
FB|FBgn0086707 - symbol:ncm "nucampholin" species:7227 "D...   452  1.7e-67   2
ASPGD|ASPL0000053315 - symbol:AN0289 species:162425 "Emer...   395  1.3e-66   3
UNIPROTKB|Q5ZKA3 - symbol:CWC22 "Pre-mRNA-splicing factor...   410  2.8e-66   3
ZFIN|ZDB-GENE-060929-452 - symbol:cwc22 "CWC22 spliceosom...   413  1.1e-62   2
RGD|1565385 - symbol:Cwc22 "CWC22 spliceosome-associated ...   413  2.7e-61   2
MGI|MGI:2136773 - symbol:Cwc22 "CWC22 spliceosome-associa...   413  2.8e-61   2
UNIPROTKB|E9PU74 - symbol:LOC500684 "Protein LOC500684" s...   409  8.0e-61   2
UNIPROTKB|Q52KN9 - symbol:cwc22 "Pre-mRNA-splicing factor...   403  5.7e-60   2
TAIR|locus:2025797 - symbol:AT1G80930 "AT1G80930" species...   410  3.9e-54   2
WB|WBGene00002957 - symbol:let-858 species:6239 "Caenorha...   324  5.3e-52   2
UNIPROTKB|Q17336 - symbol:let-858 "Pre-mRNA-splicing fact...   324  5.3e-52   2
POMBASE|SPBC13E7.01 - symbol:cwf22 "splicing factor Cwf22...   321  6.6e-52   2
DICTYBASE|DDB_G0267796 - symbol:DDB_G0267796 "initiation ...   383  3.3e-48   2
GENEDB_PFALCIPARUM|PFL1855w - symbol:PFL1855w "cell cycle...   314  8.0e-46   3
UNIPROTKB|Q8I540 - symbol:PFL1855w "Cell cycle control pr...   314  8.0e-46   3
CGD|CAL0000928 - symbol:orf19.1771 species:5476 "Candida ...   174  1.1e-21   2
RGD|1590641 - symbol:LOC680519 "similar to CG12750-PA" sp...   248  1.3e-20   1
UNIPROTKB|F1LX25 - symbol:F1LX25 "Uncharacterized protein...   200  5.1e-16   1
UNIPROTKB|F1M323 - symbol:F1M323 "Uncharacterized protein...   185  3.1e-14   1
TAIR|locus:504956291 - symbol:AT1G52325 "AT1G52325" speci...   151  2.3e-10   1
SGD|S000003510 - symbol:CWC22 "Spliceosome-associated pro...   161  6.1e-09   1


>UNIPROTKB|B7WP74 [details] [associations]
            symbol:CWC22 "Pre-mRNA-splicing factor CWC22 homolog"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic
            process" evidence=IEA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 SUPFAM:SSF48371
            GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
            HOGENOM:HOG000212368 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
            PROSITE:PS51366 EMBL:AC068194 EMBL:AC096587 HGNC:HGNC:29322
            ChiTaRS:CWC22 IPI:IPI00917297 ProteinModelPortal:B7WP74
            STRING:B7WP74 Ensembl:ENST00000404136 ArrayExpress:B7WP74
            Bgee:B7WP74 Uniprot:B7WP74
        Length = 745

 Score = 411 (149.7 bits), Expect = 6.1e-69, Sum P(3) = 6.1e-69
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   515 CMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 574

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   575 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 631

 Score = 251 (93.4 bits), Expect = 6.1e-69, Sum P(3) = 6.1e-69
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   257 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 314

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   315 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHM 369

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   370 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL 406

 Score = 232 (86.7 bits), Expect = 2.5e-18, P = 2.5e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   542 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 601

Query:    75 KIKD 78
             ++KD
Sbjct:   602 RLKD 605

 Score = 89 (36.4 bits), Expect = 6.1e-69, Sum P(3) = 6.1e-69
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   451 NLVSFRRTIYLAIQSSLDFEEC 472


>UNIPROTKB|F1NI57 [details] [associations]
            symbol:CWC22 "Pre-mRNA-splicing factor CWC22 homolog"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016070
            "RNA metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 GO:GO:0005737
            SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723 GO:GO:0016070
            GO:GO:0071013 Gene3D:1.25.40.180 GeneTree:ENSGT00650000093379
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            IPI:IPI00584173 EMBL:AADN02019987 Ensembl:ENSGALT00000014643
            OMA:DESNGRD Uniprot:F1NI57
        Length = 854

 Score = 410 (149.4 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
 Identities = 76/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD+I W VL CI L+EE 
Sbjct:   446 CMLKKEYMESFEAIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEET 505

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQELSEYMGL  LN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   506 TTSSSRIFVKIFFQELSEYMGLPNLNARLKDITLQPFFEGLLPRDNPRNTRFAINFF 562

 Score = 254 (94.5 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
 Identities = 63/153 (41%), Positives = 88/153 (57%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRIFIKILFQELSEYMGLSKLN-QK 75
             +KF AH L    +   VL C+     L E  T  S  + I  L +   +   +S      
Sbjct:   191 SKFVAH-LMNQNVAHEVL-CLEMLTLLLERPTDDSIEVAIGFLKESGLKLTEVSPRGINA 248

Query:    76 IKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLD 135
             I D  R +   + K++ RVQYMIEV+  VRKD FKD P + E LDLV EED+FTH++ L+
Sbjct:   249 IFDRLRHILH-ESKIDMRVQYMIEVMFAVRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLE 307

Query:   136 GVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
                + +D+LNVF+ DP ++ NEEKY  L++EIL
Sbjct:   308 DEYNPEDVLNVFKMDPNFMENEEKYKALKKEIL 340

 Score = 232 (86.7 bits), Expect = 3.1e-18, P = 3.1e-18
 Identities = 45/64 (70%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD+I W VL CI L+EE TTSS RIF+KI FQELSEYMGL  LN 
Sbjct:   473 NKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMGLPNLNA 532

Query:    75 KIKD 78
             ++KD
Sbjct:   533 RLKD 536

 Score = 89 (36.4 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   382 NLVSFRRTIYLAIQSSLDFEEC 403


>UNIPROTKB|F1MWG3 [details] [associations]
            symbol:CWC22 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016070 "RNA metabolic
            process" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003890
            InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
            GO:GO:0005737 SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723
            GO:GO:0016070 GO:GO:0071013 Gene3D:1.25.40.180
            GeneTree:ENSGT00650000093379 OMA:SENFRRK InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 EMBL:DAAA02004113
            IPI:IPI00708801 Ensembl:ENSBTAT00000028962 Uniprot:F1MWG3
        Length = 899

 Score = 413 (150.4 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   513 CMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 572

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   573 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 629

 Score = 251 (93.4 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   255 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 312

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   313 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHM 367

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   368 LPLEDDYNPEDVLNVFKMDPNFMENEEKYRAIKKEIL 404

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   540 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 599

Query:    75 KIKD 78
             ++KD
Sbjct:   600 RLKD 603

 Score = 89 (36.4 bits), Expect = 2.2e-68, Sum P(3) = 2.2e-68
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   449 NLVSFRRTIYLAIQSSLDFEEC 470


>UNIPROTKB|F1RYP5 [details] [associations]
            symbol:CWC22 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016070 "RNA metabolic
            process" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003890
            InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
            GO:GO:0005737 SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723
            GO:GO:0016070 GO:GO:0071013 Gene3D:1.25.40.180
            GeneTree:ENSGT00650000093379 OMA:SENFRRK InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 EMBL:CU855527
            Ensembl:ENSSSCT00000017430 Uniprot:F1RYP5
        Length = 904

 Score = 413 (150.4 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   514 CMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 573

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   574 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 630

 Score = 251 (93.4 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   256 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 313

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   314 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHM 368

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   369 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL 405

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   541 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 600

Query:    75 KIKD 78
             ++KD
Sbjct:   601 RLKD 604

 Score = 89 (36.4 bits), Expect = 2.3e-68, Sum P(3) = 2.3e-68
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   450 NLVSFRRTIYLAIQSSLDFEEC 471


>UNIPROTKB|J9P9J1 [details] [associations]
            symbol:CWC22 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016070 "RNA metabolic process" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 SUPFAM:SSF48371
            GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
            GeneTree:ENSGT00650000093379 KO:K13100 InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 CTD:57703
            EMBL:AAEX03017820 EMBL:AAEX03017821 RefSeq:XP_545549.2
            Ensembl:ENSCAFT00000049152 GeneID:488427 KEGG:cfa:488427
            Uniprot:J9P9J1
        Length = 908

 Score = 413 (150.4 bits), Expect = 2.4e-68, Sum P(3) = 2.4e-68
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   515 CMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 574

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   575 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 631

 Score = 251 (93.4 bits), Expect = 2.4e-68, Sum P(3) = 2.4e-68
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   257 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 314

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   315 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHM 369

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   370 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL 406

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   542 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 601

Query:    75 KIKD 78
             ++KD
Sbjct:   602 RLKD 605

 Score = 89 (36.4 bits), Expect = 2.4e-68, Sum P(3) = 2.4e-68
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   451 NLVSFRRTIYLAIQSSLDFEEC 472


>UNIPROTKB|E2RIF6 [details] [associations]
            symbol:CWC22 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016070 "RNA metabolic process" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 SUPFAM:SSF48371
            GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
            GeneTree:ENSGT00650000093379 OMA:SENFRRK InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 EMBL:AAEX03017820
            EMBL:AAEX03017821 Ensembl:ENSCAFT00000022474 Uniprot:E2RIF6
        Length = 914

 Score = 413 (150.4 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   516 CMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 575

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   576 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 632

 Score = 251 (93.4 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   256 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 313

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   314 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHM 368

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   369 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL 405

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   543 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 602

Query:    75 KIKD 78
             ++KD
Sbjct:   603 RLKD 606

 Score = 89 (36.4 bits), Expect = 2.5e-68, Sum P(3) = 2.5e-68
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   452 NLVSFRRTIYLAIQSSLDFEEC 473


>UNIPROTKB|B7WP27 [details] [associations]
            symbol:CWC22 "Pre-mRNA-splicing factor CWC22 homolog"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic
            process" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 GO:GO:0005634
            GO:GO:0005737 SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723
            GO:GO:0016070 Gene3D:1.25.40.180 HOGENOM:HOG000212368
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            EMBL:AC068194 EMBL:AC096587 HGNC:HGNC:29322 ChiTaRS:CWC22
            IPI:IPI00917297 ProteinModelPortal:B7WP27 STRING:B7WP27
            Ensembl:ENST00000295749 HOVERGEN:HBG054017 ArrayExpress:B7WP27
            Bgee:B7WP27 Uniprot:B7WP27
        Length = 908

 Score = 411 (149.7 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   515 CMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 574

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   575 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 631

 Score = 251 (93.4 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   257 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 314

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   315 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHM 369

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   370 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL 406

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   542 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 601

Query:    75 KIKD 78
             ++KD
Sbjct:   602 RLKD 605

 Score = 89 (36.4 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   451 NLVSFRRTIYLAIQSSLDFEEC 472


>UNIPROTKB|Q9HCG8 [details] [associations]
            symbol:CWC22 "Pre-mRNA-splicing factor CWC22 homolog"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0048024 "regulation of mRNA splicing, via spliceosome"
            evidence=IC] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005681
            "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA splicing,
            via spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 GO:GO:0005737
            SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723 GO:GO:0000398
            GO:GO:0071013 GO:GO:0048024 Gene3D:1.25.40.180 eggNOG:NOG293831
            KO:K13100 OMA:SENFRRK InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
            PROSITE:PS51366 CTD:57703 OrthoDB:EOG4JM7P4 EMBL:AB046824
            EMBL:AK025635 EMBL:AK026978 EMBL:AC068194 EMBL:AC096587
            EMBL:BC016651 EMBL:BC031216 EMBL:BC053573 EMBL:BC057826
            EMBL:BC093952 EMBL:BC093954 IPI:IPI00177381 RefSeq:NP_065994.1
            UniGene:Hs.311363 ProteinModelPortal:Q9HCG8 IntAct:Q9HCG8
            STRING:Q9HCG8 PhosphoSite:Q9HCG8 DMDM:296439380 PaxDb:Q9HCG8
            PRIDE:Q9HCG8 Ensembl:ENST00000410053 GeneID:57703 KEGG:hsa:57703
            UCSC:uc002unp.2 GeneCards:GC02M180809 H-InvDB:HIX0022794
            HGNC:HGNC:29322 HPA:HPA036748 neXtProt:NX_Q9HCG8
            PharmGKB:PA164718415 InParanoid:Q9HCG8 ChiTaRS:CWC22
            GenomeRNAi:57703 NextBio:64575 ArrayExpress:Q9HCG8 Bgee:Q9HCG8
            Genevestigator:Q9HCG8 Uniprot:Q9HCG8
        Length = 908

 Score = 411 (149.7 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   515 CMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 574

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   575 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 631

 Score = 251 (93.4 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   257 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 314

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   315 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHM 369

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   370 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL 406

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   542 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 601

Query:    75 KIKD 78
             ++KD
Sbjct:   602 RLKD 605

 Score = 89 (36.4 bits), Expect = 3.9e-68, Sum P(3) = 3.9e-68
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   451 NLVSFRRTIYLAIQSSLDFEEC 472


>UNIPROTKB|Q5RA93 [details] [associations]
            symbol:CWC22 "Pre-mRNA-splicing factor CWC22 homolog"
            species:9601 "Pongo abelii" [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005681 "spliceosomal complex" evidence=ISS] InterPro:IPR003890
            InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
            SUPFAM:SSF48371 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
            GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.180 KO:K13100
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            CTD:57703 EMBL:CR859125 RefSeq:NP_001125780.1 UniGene:Pab.19070
            ProteinModelPortal:Q5RA93 GeneID:100172707 KEGG:pon:100172707
            InParanoid:Q5RA93 Uniprot:Q5RA93
        Length = 908

 Score = 411 (149.7 bits), Expect = 1.0e-67, Sum P(3) = 1.0e-67
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   515 CMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 574

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   575 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 631

 Score = 247 (92.0 bits), Expect = 1.0e-67, Sum P(3) = 1.0e-67
 Identities = 59/157 (37%), Positives = 95/157 (60%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   257 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 314

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             +  ++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   315 IFGRLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHM 369

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   370 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL 406

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   542 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 601

Query:    75 KIKD 78
             ++KD
Sbjct:   602 RLKD 605

 Score = 89 (36.4 bits), Expect = 1.0e-67, Sum P(3) = 1.0e-67
 Identities = 17/22 (77%), Positives = 19/22 (86%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV+ RRTIYL I SSLDFE+C
Sbjct:   451 NLVSFRRTIYLAIQSSLDFEEC 472


>FB|FBgn0086707 [details] [associations]
            symbol:ncm "nucampholin" species:7227 "Drosophila
            melanogaster" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
            evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
            InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
            Pfam:PF02854 SMART:SM00543 GO:GO:0006911 SUPFAM:SSF48371
            EMBL:AE014134 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
            GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.180 eggNOG:NOG293831
            GeneTree:ENSGT00650000093379 KO:K13100 InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 EMBL:AY061596
            EMBL:AY089504 EMBL:BT100034 EMBL:BT031132 RefSeq:NP_609877.2
            UniGene:Dm.11546 ProteinModelPortal:Q9VJ87 MINT:MINT-1003368
            STRING:Q9VJ87 PaxDb:Q9VJ87 EnsemblMetazoa:FBtr0081088 GeneID:35099
            KEGG:dme:Dmel_CG12750 CTD:35099 FlyBase:FBgn0086707
            InParanoid:Q9VJ87 OMA:ETEDILN OrthoDB:EOG48GTJG PhylomeDB:Q9VJ87
            GenomeRNAi:35099 NextBio:791857 Bgee:Q9VJ87 Uniprot:Q9VJ87
        Length = 1330

 Score = 452 (164.2 bits), Expect = 1.7e-67, Sum P(2) = 1.7e-67
 Identities = 85/135 (62%), Positives = 106/135 (78%)

Query:   182 ALRRTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLF 241
             A +RT Y   +  L    C INK+Y+ P E+IF+++Y T HRLD N+LRNV+KFFAH LF
Sbjct:   754 AEQRT-YEKFYGLLAQRFCNINKIYIPPFEEIFKDTYQTTHRLDTNRLRNVSKFFAHLLF 812

Query:   242 TDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVF 301
             TDAI W VL CI LNE++TTSS RIFIKILFQEL+EYMGL KLN K+KD +L  ++ G+F
Sbjct:   813 TDAISWDVLECIQLNEDDTTSSSRIFIKILFQELAEYMGLGKLNAKLKDDVLVESIAGLF 872

Query:   302 PRDNPKNTRFAINFF 316
             P+DNP+NTRF+INFF
Sbjct:   873 PKDNPRNTRFSINFF 887

 Score = 277 (102.6 bits), Expect = 1.7e-67, Sum P(2) = 1.7e-67
 Identities = 68/157 (43%), Positives = 95/157 (60%)

Query:    19 NVAKFFAHQLFTDAIGWHVLSCIHLNE-EETTSSGRIFIKILFQELSEY-MGLSKLNQK- 75
             +  +F  H L    +   +L+   L    ET +   + + I F  L E  M L++++ K 
Sbjct:   512 SATRFIGH-LVNQRVAHEILALEILTLLVETPTDDSVEVAIAF--LKECGMKLTEVSSKG 568

Query:    76 ---IKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLM 132
                I +  R +   +GKL+KRVQYMIEVL Q+RKD FKD   V+ +L+LV E+D+FTHLM
Sbjct:   569 IGAIFEMLRNILH-EGKLDKRVQYMIEVLFQIRKDGFKDHQAVVPELELVEEDDQFTHLM 627

Query:   133 TLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILG 169
              LD   +T+DILNVF++D  Y  NE+KY  L REILG
Sbjct:   628 MLDEATETEDILNVFKFDDNYAENEDKYKGLSREILG 664

 Score = 259 (96.2 bits), Expect = 7.8e-21, P = 7.8e-21
 Identities = 49/64 (76%), Positives = 56/64 (87%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             ++LRNV+KFFAH LFTDAI W VL CI LNE++TTSS RIFIKILFQEL+EYMGL KLN 
Sbjct:   798 NRLRNVSKFFAHLLFTDAISWDVLECIQLNEDDTTSSSRIFIKILFQELAEYMGLGKLNA 857

Query:    75 KIKD 78
             K+KD
Sbjct:   858 KLKD 861

 Score = 111 (44.1 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
 Identities = 23/38 (60%), Positives = 31/38 (81%)

Query:   178 TNLVALRRTIYLTIHSSLDFEDCL--INKMYVAPLEQI 213
             TNL+ALRRTIYLTI+SSLD+E+C   + KM + P ++I
Sbjct:   706 TNLIALRRTIYLTINSSLDYEECAHKLMKMQLKPGQEI 743

 Score = 44 (20.5 bits), Expect = 5.4e-43, Sum P(2) = 5.4e-43
 Identities = 15/71 (21%), Positives = 32/71 (45%)

Query:    71 KLNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTH 130
             +L ++ KD  +PV       E  V+   E +     D+ ++     +D D +P +++   
Sbjct:   157 ELEERRKDEEQPVTTNGSSKESPVEAAAETVKPPTADHIEEGEITDKDEDDLPTKEEKKA 216

Query:   131 LMTLDGVKDTQ 141
             + +    K+TQ
Sbjct:   217 VASKSPPKETQ 227


>ASPGD|ASPL0000053315 [details] [associations]
            symbol:AN0289 species:162425 "Emericella nidulans"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0016070 "RNA
            metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
            Pfam:PF02854 SMART:SM00543 GO:GO:0005737 SUPFAM:SSF48371
            GO:GO:0008380 EMBL:BN001308 GO:GO:0003677 GO:GO:0006397
            GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.180 EMBL:AACD01000005
            eggNOG:NOG293831 HOGENOM:HOG000212368 KO:K13100 InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 RefSeq:XP_657893.1
            STRING:Q5BGP1 GeneID:2876063 KEGG:ani:AN0289.2 OrthoDB:EOG4KPXKV
            Uniprot:Q5BGP1
        Length = 868

 Score = 395 (144.1 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
 Identities = 70/115 (60%), Positives = 92/115 (80%)

Query:   202 INKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETT 261
             IN+++    E  F + Y T+HR + N+LRN+A+FF H L TDA+GWHVLS IHLNEEETT
Sbjct:   490 INRLWSDLFENAFAKYYDTIHRYETNRLRNIARFFGHMLSTDALGWHVLSVIHLNEEETT 549

Query:   262 SSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             SS RIFIKILFQ+L+E++GL KL +++ D LL P+ EG+FP DNP+NTRF+IN+F
Sbjct:   550 SSSRIFIKILFQDLAEHLGLPKLRERMTDELLRPSFEGLFPTDNPRNTRFSINYF 604

 Score = 249 (92.7 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
 Identities = 55/109 (50%), Positives = 72/109 (66%)

Query:    61 QELSEYMGLSKLNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLD 120
             Q L E  G   L   + D FR +   +  ++KRVQYMIEVL QVRKD +KD P + E+LD
Sbjct:   284 QHLEEMSGPIAL--AVFDQFRNILH-EADIDKRVQYMIEVLFQVRKDRYKDNPAIKEELD 340

Query:   121 LVPEEDKFTHLMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILG 169
             LV EED+ TH + LD   +TQD LN+F+YDP++  +EE Y  L+ EILG
Sbjct:   341 LVEEEDQITHRIGLDDEIETQDGLNIFKYDPQWEEHEEAYKKLKAEILG 389

 Score = 246 (91.7 bits), Expect = 1.0e-19, P = 1.0e-19
 Identities = 46/69 (66%), Positives = 58/69 (84%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             ++LRN+A+FF H L TDA+GWHVLS IHLNEEETTSS RIFIKILFQ+L+E++GL KL +
Sbjct:   515 NRLRNIARFFGHMLSTDALGWHVLSVIHLNEEETTSSSRIFIKILFQDLAEHLGLPKLRE 574

Query:    75 KIKDPF-RP 82
             ++ D   RP
Sbjct:   575 RMTDELLRP 583

 Score = 92 (37.4 bits), Expect = 1.3e-66, Sum P(3) = 1.3e-66
 Identities = 19/31 (61%), Positives = 24/31 (77%)

Query:   178 TNLVALRRTIYLTIHSSLDFEDCLINKMYVA 208
             T+LV LRRTIYLTI SS+DFE+C    M ++
Sbjct:   423 TDLVNLRRTIYLTIMSSIDFEECCHKLMKIS 453


>UNIPROTKB|Q5ZKA3 [details] [associations]
            symbol:CWC22 "Pre-mRNA-splicing factor CWC22 homolog"
            species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
            InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
            Pfam:PF02854 SMART:SM00543 SUPFAM:SSF48371 GO:GO:0008380
            GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            Gene3D:1.25.40.180 eggNOG:NOG293831 HOGENOM:HOG000212368 KO:K13100
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            EMBL:AJ720181 IPI:IPI00584173 RefSeq:NP_001026421.1
            UniGene:Gga.22423 ProteinModelPortal:Q5ZKA3 STRING:Q5ZKA3
            GeneID:424123 KEGG:gga:424123 CTD:57703 InParanoid:Q5ZKA3
            OrthoDB:EOG4JM7P4 NextBio:20826498 Uniprot:Q5ZKA3
        Length = 926

 Score = 410 (149.4 bits), Expect = 2.8e-66, Sum P(3) = 2.8e-66
 Identities = 76/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD+I W VL CI L+EE 
Sbjct:   518 CMLKKEYMESFEAIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEET 577

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQELSEYMGL  LN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   578 TTSSSRIFVKIFFQELSEYMGLPNLNARLKDITLQPFFEGLLPRDNPRNTRFAINFF 634

 Score = 254 (94.5 bits), Expect = 2.8e-66, Sum P(3) = 2.8e-66
 Identities = 63/153 (41%), Positives = 88/153 (57%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRIFIKILFQELSEYMGLSKLN-QK 75
             +KF AH L    +   VL C+     L E  T  S  + I  L +   +   +S      
Sbjct:   263 SKFVAH-LMNQNVAHEVL-CLEMLTLLLERPTDDSIEVAIGFLKESGLKLTEVSPRGINA 320

Query:    76 IKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLD 135
             I D  R +   + K++ RVQYMIEV+  VRKD FKD P + E LDLV EED+FTH++ L+
Sbjct:   321 IFDRLRHILH-ESKIDMRVQYMIEVMFAVRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLE 379

Query:   136 GVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
                + +D+LNVF+ DP ++ NEEKY  L++EIL
Sbjct:   380 DEYNPEDVLNVFKMDPNFMENEEKYKALKKEIL 412

 Score = 232 (86.7 bits), Expect = 3.5e-18, P = 3.5e-18
 Identities = 45/64 (70%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD+I W VL CI L+EE TTSS RIF+KI FQELSEYMGL  LN 
Sbjct:   545 NKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMGLPNLNA 604

Query:    75 KIKD 78
             ++KD
Sbjct:   605 RLKD 608

 Score = 70 (29.7 bits), Expect = 2.8e-66, Sum P(3) = 2.8e-66
 Identities = 15/22 (68%), Positives = 16/22 (72%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             NLV    TIYL I SSLDFE+C
Sbjct:   454 NLVPSVGTIYLAIQSSLDFEEC 475


>ZFIN|ZDB-GENE-060929-452 [details] [associations]
            symbol:cwc22 "CWC22 spliceosome-associated protein
            homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA;ISS] [GO:0016070 "RNA metabolic process" evidence=IEA]
            [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003890
            InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
            ZFIN:ZDB-GENE-060929-452 SUPFAM:SSF48371 GO:GO:0008380
            GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            Gene3D:1.25.40.180 eggNOG:NOG293831 HOGENOM:HOG000212368 KO:K13100
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            CTD:57703 OrthoDB:EOG4JM7P4 EMBL:BC124357 IPI:IPI00491845
            RefSeq:NP_001071037.1 UniGene:Dr.74197 ProteinModelPortal:Q08C72
            GeneID:566033 KEGG:dre:566033 InParanoid:Q08C72 NextBio:20887991
            ArrayExpress:Q08C72 Uniprot:Q08C72
        Length = 985

 Score = 413 (150.4 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
 Identities = 73/117 (62%), Positives = 92/117 (78%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             CL+ K Y+   E IF+E Y T+HRL+ NKLRNVA+ FAH L+TD++ W VL C+ ++E+ 
Sbjct:   609 CLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARIFAHLLYTDSVPWSVLECVRMSEDT 668

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KILFQEL  YMGL KLN+++KD  L P  EG+FPRDNP+NTRFAINFF
Sbjct:   669 TTSSSRIFVKILFQELCAYMGLPKLNERLKDTTLQPFFEGLFPRDNPRNTRFAINFF 725

 Score = 266 (98.7 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
 Identities = 64/157 (40%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRIFIKILFQ---ELSEYM--GLSK 71
             +KF  H L    +   VL C+     L E  T  S  + I  L +   +L+E    G++ 
Sbjct:   351 SKFVGH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINA 408

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  +RKD FKD P + E LDLV EED+FTH+
Sbjct:   409 IFERLRNILH-----ESEIDKRVQYMIEVMFAIRKDGFKDHPIIPEGLDLVEEEDQFTHM 463

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   +T+DILNVF+ DP +L NEEKY T++REIL
Sbjct:   464 LPLEDEYNTEDILNVFKLDPNFLENEEKYKTIKREIL 500

 Score = 226 (84.6 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 40/64 (62%), Positives = 53/64 (82%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVA+ FAH L+TD++ W VL C+ ++E+ TTSS RIF+KILFQEL  YMGL KLN+
Sbjct:   636 NKLRNVARIFAHLLYTDSVPWSVLECVRMSEDTTTSSSRIFVKILFQELCAYMGLPKLNE 695

Query:    75 KIKD 78
             ++KD
Sbjct:   696 RLKD 699

 Score = 93 (37.8 bits), Expect = 1.7e-44, Sum P(2) = 1.7e-44
 Identities = 33/97 (34%), Positives = 45/97 (46%)

Query:   108 NFKDFPDVIE-DLDLVPEEDKFTHLMT--LD-GVKDTQDILNVFQYDPEYLMNEEKYTTL 163
             N +D  +V + D + +  E+K+  +    LD G  D+ D       D E    E++    
Sbjct:   471 NTEDILNVFKLDPNFLENEEKYKTIKREILDEGSSDSGDDAGG-SGDDEDDDEEDEEAAA 529

Query:   164 RREILGXXXXXXXXTNLVALRRTIYLTIHSSLDFEDC 200
               E            NLVA RRTIYL I SSLDFE+C
Sbjct:   530 GEEQEKVTIFDQTEVNLVAFRRTIYLAIQSSLDFEEC 566


>RGD|1565385 [details] [associations]
            symbol:Cwc22 "CWC22 spliceosome-associated protein homolog (S.
            cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
            complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0016070 "RNA metabolic process" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 RGD:1565385
            SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723 GO:GO:0016070
            Gene3D:1.25.40.180 GeneTree:ENSGT00650000093379 InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 IPI:IPI00382207
            Ensembl:ENSRNOT00000037684 UCSC:RGD:1565385 ArrayExpress:F1LY38
            Uniprot:F1LY38
        Length = 905

 Score = 413 (150.4 bits), Expect = 2.7e-61, Sum P(2) = 2.7e-61
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   516 CMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 575

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   576 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 632

 Score = 251 (93.4 bits), Expect = 2.7e-61, Sum P(2) = 2.7e-61
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   258 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 315

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   316 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHM 370

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   371 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKVIKKEIL 407

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   543 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 602

Query:    75 KIKD 78
             ++KD
Sbjct:   603 RLKD 606

 Score = 90 (36.7 bits), Expect = 6.1e-27, Sum P(2) = 6.1e-27
 Identities = 25/59 (42%), Positives = 33/59 (55%)

Query:   179 NLVALRRTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDI-NKLRNVAKFF 236
             NLV+ RRTIYL I SSLDFE+C    + +   E   +E  + +  LD   + R   KFF
Sbjct:   452 NLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMI--LDCCAQQRTYEKFF 508


>MGI|MGI:2136773 [details] [associations]
            symbol:Cwc22 "CWC22 spliceosome-associated protein homolog
            (S. cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016070 "RNA metabolic
            process" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 MGI:MGI:2136773
            SUPFAM:SSF48371 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
            GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.180 eggNOG:NOG293831
            GeneTree:ENSGT00650000093379 HOGENOM:HOG000212368 KO:K13100
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            CTD:57703 OrthoDB:EOG4JM7P4 ChiTaRS:CWC22 EMBL:AK045589
            EMBL:AK132001 EMBL:AK077961 EMBL:AK149528 EMBL:BC003993
            IPI:IPI00756701 IPI:IPI00757147 RefSeq:NP_085037.2
            RefSeq:NP_766255.1 UniGene:Mm.288151 ProteinModelPortal:Q8C5N3
            PhosphoSite:Q8C5N3 PaxDb:Q8C5N3 PRIDE:Q8C5N3
            Ensembl:ENSMUST00000065889 Ensembl:ENSMUST00000111818
            Ensembl:ENSMUST00000111821 GeneID:80744 KEGG:mmu:80744
            InParanoid:Q8C5N3 OMA:VENEERY NextBio:350099 Bgee:Q8C5N3
            CleanEx:MM_BC003993 Genevestigator:Q8C5N3 Uniprot:Q8C5N3
        Length = 908

 Score = 413 (150.4 bits), Expect = 2.8e-61, Sum P(2) = 2.8e-61
 Identities = 75/117 (64%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   514 CMLKKEYMESFESIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 573

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PRDNP+NTRFAINFF
Sbjct:   574 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFF 630

 Score = 251 (93.4 bits), Expect = 2.8e-61, Sum P(2) = 2.8e-61
 Identities = 59/157 (37%), Positives = 96/157 (61%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRI---FIKILFQELSEYM--GLSK 71
             +KF AH L    +   VL C+     L E  T  S  +   F+K    +L++    G++ 
Sbjct:   255 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDSVEVAIGFLKECGLKLTQVSPRGINA 312

Query:    72 LNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHL 131
             + +++++        + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH+
Sbjct:   313 IFERLRNILH-----ESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHM 367

Query:   132 MTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
             + L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   368 LPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEIL 404

 Score = 232 (86.7 bits), Expect = 3.4e-18, P = 3.4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   541 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 600

Query:    75 KIKD 78
             ++KD
Sbjct:   601 RLKD 604

 Score = 90 (36.7 bits), Expect = 6.1e-27, Sum P(2) = 6.1e-27
 Identities = 25/59 (42%), Positives = 33/59 (55%)

Query:   179 NLVALRRTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDI-NKLRNVAKFF 236
             NLV+ RRTIYL I SSLDFE+C    + +   E   +E  + +  LD   + R   KFF
Sbjct:   450 NLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMI--LDCCAQQRTYEKFF 506


>UNIPROTKB|E9PU74 [details] [associations]
            symbol:LOC500684 "Protein LOC500684" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
            evidence=IEA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 SUPFAM:SSF48371
            GO:GO:0003677 GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            IPI:IPI00765240 Ensembl:ENSRNOT00000036640 RGD:1562981 OMA:SHENSYS
            Uniprot:E9PU74
        Length = 879

 Score = 409 (149.0 bits), Expect = 8.0e-61, Sum P(2) = 8.0e-61
 Identities = 74/117 (63%), Positives = 91/117 (77%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C++ K Y+   E IF+E Y+T+HRL+ NKLRNVAK FAH L+TD++ W VL CI L+EE 
Sbjct:   490 CMLKKEYMESFESIFKEQYNTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEET 549

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  EG+ PR+NP+NTRFAINFF
Sbjct:   550 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRNNPRNTRFAINFF 606

 Score = 250 (93.1 bits), Expect = 8.0e-61, Sum P(2) = 8.0e-61
 Identities = 61/156 (39%), Positives = 95/156 (60%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRIFIKILFQELSEYMGLSKLNQK- 75
             +KF AH L    +   VL C+     L E  T  S  + I  L +E    + L++++ + 
Sbjct:   254 SKFVAH-LINQNVAHEVL-CLEILTLLLERPTDDSVEVAIGFL-KECG--LKLTQVSPRG 308

Query:    76 ---IKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLM 132
                I +  R +   + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH++
Sbjct:   309 INAIFERLRNIVH-ESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHML 367

Query:   133 TLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
              L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   368 PLEDDYNPEDVLNVFKMDPNFMENEEKYKVIKKEIL 403

 Score = 232 (86.7 bits), Expect = 3.2e-18, P = 3.2e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL CI L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   517 NKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 576

Query:    75 KIKD 78
             ++KD
Sbjct:   577 RLKD 580

 Score = 43 (20.2 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query:   193 SSLDFEDCLINKMYVAPLEQIFRES 217
             SSLDFE+C ++K+    L+  F ES
Sbjct:   440 SSLDFEEC-VHKL----LKMEFAES 459


>UNIPROTKB|Q52KN9 [details] [associations]
            symbol:cwc22 "Pre-mRNA-splicing factor CWC22 homolog"
            species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
            InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
            Pfam:PF02854 SMART:SM00543 SUPFAM:SSF48371 GO:GO:0008380
            GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
            Gene3D:1.25.40.180 KO:K13100 InterPro:IPR003891 Pfam:PF02847
            SMART:SM00544 PROSITE:PS51366 CTD:57703 EMBL:BC094259
            RefSeq:NP_001089418.1 UniGene:Xl.41789 ProteinModelPortal:Q52KN9
            GeneID:734468 KEGG:xla:734468 Xenbase:XB-GENE-1010542
            Uniprot:Q52KN9
        Length = 803

 Score = 403 (146.9 bits), Expect = 5.7e-60, Sum P(2) = 5.7e-60
 Identities = 73/117 (62%), Positives = 90/117 (76%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             CL+ K Y+   E IF+E + T+HRL+ NKLRNVAK FAH L+TD++ W VL C++L+EE 
Sbjct:   562 CLLKKEYLEAFENIFKEQFETIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECMNLSEET 621

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIF+KI FQEL EYMGL KLN ++KD  L P  +G+ P DNPKNTRFAINFF
Sbjct:   622 TTSSSRIFVKIFFQELCEYMGLPKLNARLKDVTLQPFFQGLLPMDNPKNTRFAINFF 678

 Score = 246 (91.7 bits), Expect = 5.7e-60, Sum P(2) = 5.7e-60
 Identities = 45/82 (54%), Positives = 64/82 (78%)

Query:    87 KGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNV 146
             + +++KRVQYMIEV+  VRKD FKD P + E LDLV EED+FTH++ L+   + +D+LNV
Sbjct:   372 ESEIDKRVQYMIEVMFAVRKDGFKDHPVIPEGLDLVEEEDQFTHMLPLEDDYNQEDVLNV 431

Query:   147 FQYDPEYLMNEEKYTTLRREIL 168
             F+ DP++L NEEKY  +++EIL
Sbjct:   432 FKMDPDFLENEEKYKAIKKEIL 453

 Score = 231 (86.4 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
 Identities = 43/64 (67%), Positives = 53/64 (82%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAK FAH L+TD++ W VL C++L+EE TTSS RIF+KI FQEL EYMGL KLN 
Sbjct:   589 NKLRNVAKMFAHLLYTDSLPWSVLECMNLSEETTTSSSRIFVKIFFQELCEYMGLPKLNA 648

Query:    75 KIKD 78
             ++KD
Sbjct:   649 RLKD 652

 Score = 97 (39.2 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
 Identities = 35/97 (36%), Positives = 45/97 (46%)

Query:   108 NFKDFPDVIE-DLDLVPEEDKFTHLMT--LD-GVKDTQDILNVFQYDPEYLMNEEKYTTL 163
             N +D  +V + D D +  E+K+  +    LD G  D++   N    D E    EE     
Sbjct:   424 NQEDVLNVFKMDPDFLENEEKYKAIKKEILDEGDSDSEGDANEGSED-ESEEEEEDGQEA 482

Query:   164 RREILGXXXXXXXXTNLVALRRTIYLTIHSSLDFEDC 200
               E            NLVA RRTIYL I SSLDFE+C
Sbjct:   483 GTEGEKMTIHDKTEVNLVAFRRTIYLAIQSSLDFEEC 519

 Score = 37 (18.1 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query:   116 IEDLDLVPEEDKFTHLMTLDGVKDTQDILNVF 147
             ++D+ L P    F  L+ +D  K+T+  +N F
Sbjct:   650 LKDVTLQPF---FQGLLPMDNPKNTRFAINFF 678


>TAIR|locus:2025797 [details] [associations]
            symbol:AT1G80930 "AT1G80930" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM;IDA] [GO:0006412 "translation" evidence=ISS]
            [GO:0016070 "RNA metabolic process" evidence=IEA] [GO:0005829
            "cytosol" evidence=IDA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 EMBL:CP002684
            GO:GO:0005829 GO:GO:0005634 SUPFAM:SSF48371 GO:GO:0003677
            GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180 EMBL:AC011713
            HOGENOM:HOG000212368 KO:K13100 InterPro:IPR003891 Pfam:PF02847
            SMART:SM00544 PROSITE:PS51366 EMBL:AY139757 EMBL:BT004547
            IPI:IPI00532679 PIR:C96842 RefSeq:NP_178208.1 UniGene:At.43915
            ProteinModelPortal:Q9SAG7 STRING:Q9SAG7 PRIDE:Q9SAG7
            EnsemblPlants:AT1G80930.1 GeneID:844433 KEGG:ath:AT1G80930
            TAIR:At1g80930 InParanoid:Q9SAG7 OMA:DGHENGS PhylomeDB:Q9SAG7
            ProtClustDB:CLSN2682123 Genevestigator:Q9SAG7 Uniprot:Q9SAG7
        Length = 900

 Score = 410 (149.4 bits), Expect = 3.9e-54, Sum P(2) = 3.9e-54
 Identities = 78/132 (59%), Positives = 101/132 (76%)

Query:   185 RTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDA 244
             RT YL  +  L    C+INK++    E+ F + YS +HRL+ NKLRNVAKFFAH L TDA
Sbjct:   696 RT-YLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDA 754

Query:   245 IGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRD 304
             + WHVL+ I L EE+TTSS RIFIKILFQELSE++G+  LN++++DP +  ++E +FP+D
Sbjct:   755 LPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLQDPTMQESLESIFPKD 814

Query:   305 NPKNTRFAINFF 316
             NPKNTRFAINFF
Sbjct:   815 NPKNTRFAINFF 826

 Score = 236 (88.1 bits), Expect = 1.3e-18, P = 1.3e-18
 Identities = 45/65 (69%), Positives = 56/65 (86%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             +KLRNVAKFFAH L TDA+ WHVL+ I L EE+TTSS RIFIKILFQELSE++G+  LN+
Sbjct:   737 NKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNE 796

Query:    75 KIKDP 79
             +++DP
Sbjct:   797 RLQDP 801

 Score = 186 (70.5 bits), Expect = 3.9e-54, Sum P(2) = 3.9e-54
 Identities = 39/94 (41%), Positives = 64/94 (68%)

Query:    76 IKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLD 135
             I + FR +   +G+++KRVQY+IE L   RK  F+  P V  +LDLV  E+K++H ++LD
Sbjct:   515 IFERFRGILH-EGEIDKRVQYLIESLFATRKAKFQGHPAVRPELDLV--EEKYSHDLSLD 571

Query:   136 GVKDTQDILNVFQYDPEYLMNEEKYTTLRREILG 169
                D +  L++F+ DP+++ NE+KY  L++E+LG
Sbjct:   572 HEIDPETALDIFKPDPDFVENEKKYEALKKELLG 605

 Score = 86 (35.3 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
 Identities = 18/22 (81%), Positives = 20/22 (90%)

Query:   178 TNLVALRRTIYLTIHSSLDFED 199
             TNLV LRRTIYLTI SS+DFE+
Sbjct:   645 TNLVNLRRTIYLTIMSSVDFEE 666


>WB|WBGene00002957 [details] [associations]
            symbol:let-858 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0018996 "molting cycle, collagen
            and cuticulin-based cuticle" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007281
            "germ cell development" evidence=IMP] [GO:0007369 "gastrulation"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=IMP]
            [GO:0042078 "germ-line stem cell division" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
            evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR003890
            InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
            GO:GO:0009792 GO:GO:0040007 GO:GO:0005654 SUPFAM:SSF48371
            GO:GO:0002119 GO:GO:0008380 GO:GO:0003677 GO:GO:0018996
            GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 GO:GO:0000790
            GO:GO:0007369 Gene3D:1.25.40.180 GO:GO:0042078 EMBL:U19615
            EMBL:Z81525 PIR:T21688 RefSeq:NP_496363.1 UniGene:Cel.5489
            ProteinModelPortal:Q17336 DIP:DIP-26173N IntAct:Q17336
            MINT:MINT-1105983 STRING:Q17336 PaxDb:Q17336
            EnsemblMetazoa:F33A8.1.1 EnsemblMetazoa:F33A8.1.2 GeneID:174689
            KEGG:cel:CELE_F33A8.1 UCSC:F33A8.1.1 CTD:174689 WormBase:F33A8.1
            eggNOG:NOG293831 GeneTree:ENSGT00650000093379 HOGENOM:HOG000212368
            InParanoid:Q17336 KO:K13100 OMA:SENFRRK NextBio:885078
            GO:GO:0043073 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
            PROSITE:PS51366 Uniprot:Q17336
        Length = 897

 Score = 324 (119.1 bits), Expect = 5.3e-52, Sum P(2) = 5.3e-52
 Identities = 64/135 (47%), Positives = 90/135 (66%)

Query:   182 ALRRTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLF 241
             A +RT Y   +  L    C +   Y    E++ +++YST+HR+DI KLRN+A+  AH L 
Sbjct:   529 AQQRT-YERFYGMLIERFCRLRLEYQQYFEKLCQDTYSTIHRIDITKLRNLARLIAHLLS 587

Query:   242 TDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVF 301
             TDAI W +L+ + + EE+TTSSGRI+IK +F EL E MG+ KL+ ++ DP LA    G+F
Sbjct:   588 TDAIDWKILADMKMTEEDTTSSGRIYIKYIFNELVEAMGMVKLHSRVTDPTLAHCFVGLF 647

Query:   302 PRDNPKNTRFAINFF 316
             PR NP + RF+INFF
Sbjct:   648 PRTNPNSARFSINFF 662

 Score = 254 (94.5 bits), Expect = 5.3e-52, Sum P(2) = 5.3e-52
 Identities = 61/159 (38%), Positives = 89/159 (55%)

Query:    19 NVAKFFAHQLFTDAIGWHVLSC---IHLNEEETTSSGRI---FIKILFQELSEYM--GLS 70
             NV KF AH L    +   VL+    I + EE T  S  +   F+K    +L E     L+
Sbjct:   286 NVIKFIAH-LINQQVAHEVLALEIMILMLEEPTDDSVEVAIAFLKECGAKLLEIAPAALN 344

Query:    71 KLNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTH 130
              +  +++       R +  L++R+QYMIE   Q+RKD F  +P VIEDLDL+ EED+  H
Sbjct:   345 SVYDRLRAILMETERSENALDRRIQYMIETAMQIRKDKFAAYPAVIEDLDLIEEEDQIIH 404

Query:   131 LMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILG 169
              + L+   D ++ LNVF+ DPE+  NEE Y  +R+EI+G
Sbjct:   405 TLNLEDAVDPENGLNVFKLDPEFEKNEEVYEEIRKEIIG 443

 Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 35/64 (54%), Positives = 48/64 (75%)

Query:    16 KLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQK 75
             KLRN+A+  AH L TDAI W +L+ + + EE+TTSSGRI+IK +F EL E MG+ KL+ +
Sbjct:   574 KLRNLARLIAHLLSTDAIDWKILADMKMTEEDTTSSGRIYIKYIFNELVEAMGMVKLHSR 633

Query:    76 IKDP 79
             + DP
Sbjct:   634 VTDP 637

 Score = 68 (29.0 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
 Identities = 12/21 (57%), Positives = 17/21 (80%)

Query:   179 NLVALRRTIYLTIHSSLDFED 199
             NL A RR +YLT+ SSLD+++
Sbjct:   482 NLTAFRREVYLTMQSSLDYQE 502


>UNIPROTKB|Q17336 [details] [associations]
            symbol:let-858 "Pre-mRNA-splicing factor CWC22 homolog"
            species:6239 "Caenorhabditis elegans" [GO:0005681 "spliceosomal
            complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
            InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
            Pfam:PF02854 SMART:SM00543 GO:GO:0009792 GO:GO:0040007
            GO:GO:0005654 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0008380
            GO:GO:0003677 GO:GO:0018996 GO:GO:0006397 GO:GO:0005681
            GO:GO:0003723 GO:GO:0000790 GO:GO:0007369 Gene3D:1.25.40.180
            GO:GO:0042078 EMBL:U19615 EMBL:Z81525 PIR:T21688 RefSeq:NP_496363.1
            UniGene:Cel.5489 ProteinModelPortal:Q17336 DIP:DIP-26173N
            IntAct:Q17336 MINT:MINT-1105983 STRING:Q17336 PaxDb:Q17336
            EnsemblMetazoa:F33A8.1.1 EnsemblMetazoa:F33A8.1.2 GeneID:174689
            KEGG:cel:CELE_F33A8.1 UCSC:F33A8.1.1 CTD:174689 WormBase:F33A8.1
            eggNOG:NOG293831 GeneTree:ENSGT00650000093379 HOGENOM:HOG000212368
            InParanoid:Q17336 KO:K13100 OMA:SENFRRK NextBio:885078
            GO:GO:0043073 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
            PROSITE:PS51366 Uniprot:Q17336
        Length = 897

 Score = 324 (119.1 bits), Expect = 5.3e-52, Sum P(2) = 5.3e-52
 Identities = 64/135 (47%), Positives = 90/135 (66%)

Query:   182 ALRRTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLF 241
             A +RT Y   +  L    C +   Y    E++ +++YST+HR+DI KLRN+A+  AH L 
Sbjct:   529 AQQRT-YERFYGMLIERFCRLRLEYQQYFEKLCQDTYSTIHRIDITKLRNLARLIAHLLS 587

Query:   242 TDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVF 301
             TDAI W +L+ + + EE+TTSSGRI+IK +F EL E MG+ KL+ ++ DP LA    G+F
Sbjct:   588 TDAIDWKILADMKMTEEDTTSSGRIYIKYIFNELVEAMGMVKLHSRVTDPTLAHCFVGLF 647

Query:   302 PRDNPKNTRFAINFF 316
             PR NP + RF+INFF
Sbjct:   648 PRTNPNSARFSINFF 662

 Score = 254 (94.5 bits), Expect = 5.3e-52, Sum P(2) = 5.3e-52
 Identities = 61/159 (38%), Positives = 89/159 (55%)

Query:    19 NVAKFFAHQLFTDAIGWHVLSC---IHLNEEETTSSGRI---FIKILFQELSEYM--GLS 70
             NV KF AH L    +   VL+    I + EE T  S  +   F+K    +L E     L+
Sbjct:   286 NVIKFIAH-LINQQVAHEVLALEIMILMLEEPTDDSVEVAIAFLKECGAKLLEIAPAALN 344

Query:    71 KLNQKIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTH 130
              +  +++       R +  L++R+QYMIE   Q+RKD F  +P VIEDLDL+ EED+  H
Sbjct:   345 SVYDRLRAILMETERSENALDRRIQYMIETAMQIRKDKFAAYPAVIEDLDLIEEEDQIIH 404

Query:   131 LMTLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILG 169
              + L+   D ++ LNVF+ DPE+  NEE Y  +R+EI+G
Sbjct:   405 TLNLEDAVDPENGLNVFKLDPEFEKNEEVYEEIRKEIIG 443

 Score = 186 (70.5 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 35/64 (54%), Positives = 48/64 (75%)

Query:    16 KLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQK 75
             KLRN+A+  AH L TDAI W +L+ + + EE+TTSSGRI+IK +F EL E MG+ KL+ +
Sbjct:   574 KLRNLARLIAHLLSTDAIDWKILADMKMTEEDTTSSGRIYIKYIFNELVEAMGMVKLHSR 633

Query:    76 IKDP 79
             + DP
Sbjct:   634 VTDP 637

 Score = 68 (29.0 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
 Identities = 12/21 (57%), Positives = 17/21 (80%)

Query:   179 NLVALRRTIYLTIHSSLDFED 199
             NL A RR +YLT+ SSLD+++
Sbjct:   482 NLTAFRREVYLTMQSSLDYQE 502


>POMBASE|SPBC13E7.01 [details] [associations]
            symbol:cwf22 "splicing factor Cwf22" species:4896
            "Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
            InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
            Pfam:PF02854 SMART:SM00543 PomBase:SPBC13E7.01 GO:GO:0005737
            SUPFAM:SSF48371 GO:GO:0003677 EMBL:CU329671
            GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003723
            Gene3D:1.25.40.180 GO:GO:0045292 eggNOG:NOG293831 KO:K13100
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            OrthoDB:EOG4KPXKV EMBL:D89100 PIR:T39492 IntAct:Q9P6R9
            STRING:Q9P6R9 KEGG:spo:SPBC13E7.01 NextBio:20801084 Uniprot:Q9P6R9
        Length = 887

 Score = 321 (118.1 bits), Expect = 6.6e-52, Sum P(2) = 6.6e-52
 Identities = 58/132 (43%), Positives = 88/132 (66%)

Query:   185 RTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDA 244
             RT Y   +  +    C +++ + +  EQ F+  Y T+HR + N+LRN+A FFA+ L TD+
Sbjct:   458 RT-YAKFYGLIGERFCKLSRTWRSTYEQCFKNYYETIHRYETNRLRNIALFFANLLSTDS 516

Query:   245 IGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRD 304
             IGW V  C+ L E++TT+S RIF+KI+FQE+ E +GL  L +++ DP L P + G+FP D
Sbjct:   517 IGWEVYDCVRLTEDDTTASSRIFLKIMFQEIVEALGLKSLVERLHDPNLVPYLHGLFPVD 576

Query:   305 NPKNTRFAINFF 316
               +N RF+IN+F
Sbjct:   577 EARNVRFSINYF 588

 Score = 256 (95.2 bits), Expect = 6.6e-52, Sum P(2) = 6.6e-52
 Identities = 58/155 (37%), Positives = 93/155 (60%)

Query:    21 AKFFAH----QLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMG--LSKLNQ 74
             + F AH    ++  + +G  +L+   L E  T  S  I + +L +E+  Y+    ++   
Sbjct:   218 SSFIAHLINQKIAHEIVGLQILAV--LLERPTNDSIEIAVMLL-REIGAYLAEVSTRAYN 274

Query:    75 KIKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTL 134
              + + FR +   +G+LE+R Q++IEVL Q RKD FK+ P + ++LDLV EED+ TH ++L
Sbjct:   275 GVFERFRTILH-EGQLERRTQFIIEVLFQTRKDKFKNNPTIPQELDLVEEEDQITHYISL 333

Query:   135 DGVKDTQDILNVFQYDPEYLMNEEKYTTLRREILG 169
             D   D Q+ L +F YDP+Y  NE+KY  ++ EILG
Sbjct:   334 DDNLDVQESLGIFHYDPDYEENEKKYDAIKHEILG 368

 Score = 194 (73.4 bits), Expect = 1.7e-12, P = 1.7e-12
 Identities = 34/65 (52%), Positives = 50/65 (76%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             ++LRN+A FFA+ L TD+IGW V  C+ L E++TT+S RIF+KI+FQE+ E +GL  L +
Sbjct:   499 NRLRNIALFFANLLSTDSIGWEVYDCVRLTEDDTTASSRIFLKIMFQEIVEALGLKSLVE 558

Query:    75 KIKDP 79
             ++ DP
Sbjct:   559 RLHDP 563

 Score = 78 (32.5 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
 Identities = 15/22 (68%), Positives = 20/22 (90%)

Query:   179 NLVALRRTIYLTIHSSLDFEDC 200
             +LV LR++IYLTI SS+DFE+C
Sbjct:   408 SLVNLRKSIYLTIMSSVDFEEC 429


>DICTYBASE|DDB_G0267796 [details] [associations]
            symbol:DDB_G0267796 "initiation factor eIF-4 gamma,
            MA3 domain-containing protein" species:44689 "Dictyostelium
            discoideum" [GO:0016070 "RNA metabolic process" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR003890
            InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
            dictyBase:DDB_G0267796 SUPFAM:SSF48371 GO:GO:0003677
            EMBL:AAFI02000003 GO:GO:0005681 GO:GO:0003743 GO:GO:0000398
            Gene3D:1.25.40.180 eggNOG:NOG293831 KO:K13100 InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 OMA:VENEERY
            RefSeq:XP_647313.1 ProteinModelPortal:Q55G70 STRING:Q55G70
            EnsemblProtists:DDB0233565 GeneID:8616124 KEGG:ddi:DDB_G0267796
            InParanoid:Q55G70 Uniprot:Q55G70
        Length = 925

 Score = 383 (139.9 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
 Identities = 67/132 (50%), Positives = 96/132 (72%)

Query:   185 RTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDA 244
             RT YL  + +L    C+INK+Y    ++ F E Y+ +HRL+ N+ RN+AK +AH  FTDA
Sbjct:   716 RT-YLPFYGNLSQRFCMINKIYRDLFDRCFAEQYAVIHRLETNRFRNIAKMYAHLFFTDA 774

Query:   245 IGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRD 304
             + W  L  +H+NE ET S+ RIFIKILFQE++E++G+ KLN++++DP L  +  G+FP+D
Sbjct:   775 LPWTTLQYVHINENETNSASRIFIKILFQEMAEFLGIQKLNERLQDPSLQESFTGIFPKD 834

Query:   305 NPKNTRFAINFF 316
             N KNTR+AINFF
Sbjct:   835 NQKNTRYAINFF 846

 Score = 214 (80.4 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
 Identities = 35/65 (53%), Positives = 52/65 (80%)

Query:    15 HKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQ 74
             ++ RN+AK +AH  FTDA+ W  L  +H+NE ET S+ RIFIKILFQE++E++G+ KLN+
Sbjct:   757 NRFRNIAKMYAHLFFTDALPWTTLQYVHINENETNSASRIFIKILFQEMAEFLGIQKLNE 816

Query:    75 KIKDP 79
             +++DP
Sbjct:   817 RLQDP 821

 Score = 158 (60.7 bits), Expect = 3.3e-48, Sum P(2) = 3.3e-48
 Identities = 35/85 (41%), Positives = 55/85 (64%)

Query:    87 KGKLEKRVQYMIEVL-AQVRKDNFKDFPDVIEDLDLVPEEDKFTH-LMTLDGVKDTQDIL 144
             +G++EKR QY IE L  QVR  NF   P +I  +D+V  ED+ TH  ++++   +T+  L
Sbjct:   524 EGEIEKRTQYQIEELFKQVRL-NFPQHPALIPSMDVVEIEDQITHDTLSIEENYNTETFL 582

Query:   145 NVFQYDPEYLMNEEKYTTLRREILG 169
             N F+ D ++L N+E+Y  ++R ILG
Sbjct:   583 NFFKVDDKFLENQEQYKQVKRSILG 607

 Score = 83 (34.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
 Identities = 16/23 (69%), Positives = 19/23 (82%)

Query:   178 TNLVALRRTIYLTIHSSLDFEDC 200
             TNL+ LR+TIYL I SS DFE+C
Sbjct:   666 TNLINLRKTIYLAIMSSKDFEEC 688

 Score = 37 (18.1 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
 Identities = 7/23 (30%), Positives = 13/23 (56%)

Query:   125 EDKFTHLMTLDGVKDTQDILNVF 147
             ++ FT +   D  K+T+  +N F
Sbjct:   824 QESFTGIFPKDNQKNTRYAINFF 846


>GENEDB_PFALCIPARUM|PFL1855w [details] [associations]
            symbol:PFL1855w "cell cycle control protein,
            putative" species:5833 "Plasmodium falciparum" [GO:0051726
            "regulation of cell cycle" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR003890
            InterPro:IPR016021 InterPro:IPR016024 SMART:SM00543 SUPFAM:SSF48371
            GO:GO:0003677 GO:GO:0003723 GO:GO:0051726 EMBL:AE014188
            GO:GO:0016070 Gene3D:1.25.40.180 KO:K13100 InterPro:IPR003891
            Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 RefSeq:XP_001350777.1
            ProteinModelPortal:Q8I540 IntAct:Q8I540 MINT:MINT-1580329
            EnsemblProtists:PFL1855w:mRNA GeneID:811423 KEGG:pfa:PFL1855w
            EuPathDB:PlasmoDB:PF3D7_1238300 HOGENOM:HOG000283489
            ProtClustDB:CLSZ2848125 Uniprot:Q8I540
        Length = 967

 Score = 314 (115.6 bits), Expect = 8.0e-46, Sum P(3) = 8.0e-46
 Identities = 60/117 (51%), Positives = 78/117 (66%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C + K+Y    E+ F  S++T HRL+  KLRN +KFFAH L+TDAI W +   I L EE+
Sbjct:   833 CKLKKIYQENFEKCFDNSFNTAHRLETAKLRNCSKFFAHLLYTDAISWSIFKIIKLTEED 892

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIFIKIL QEL+  +GL     KI  P ++P + G+FP +N +N RF INFF
Sbjct:   893 TTSSTRIFIKILLQELTNNLGLQAFYHKINHPAISPFLIGLFPTNNAQNIRFCINFF 949

 Score = 189 (71.6 bits), Expect = 7.5e-12, P = 7.5e-12
 Identities = 38/64 (59%), Positives = 44/64 (68%)

Query:    16 KLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQK 75
             KLRN +KFFAH L+TDAI W +   I L EE+TTSS RIFIKIL QEL+  +GL     K
Sbjct:   861 KLRNCSKFFAHLLYTDAISWSIFKIIKLTEEDTTSSTRIFIKILLQELTNNLGLQAFYHK 920

Query:    76 IKDP 79
             I  P
Sbjct:   921 INHP 924

 Score = 163 (62.4 bits), Expect = 8.0e-46, Sum P(3) = 8.0e-46
 Identities = 50/159 (31%), Positives = 83/159 (52%)

Query:    19 NVAKFFAH----QLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSE-YMGLSKLN 73
             N  KF AH    ++  + +G  +  C  L +  T  S ++    L  E+ E Y  + +  
Sbjct:   529 NTVKFIAHMINQRIVHEIVGLQL--CSLLLQNITNDSVQVCTYFL-AEVGELYTNICRKG 585

Query:    74 QKIK-DPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTH-L 131
               I  D  + + + +G++  + QY IE L   RK+NFKDFP V +DL+L+ EEDK  H +
Sbjct:   586 LDIIFDRLKDIIQ-EGQINIKTQYDIEKLWNYRKNNFKDFPSVHDDLNLIDEEDKIVHEI 644

Query:   132 MTLDGVKDTQDILNVFQYDP--EYLMNEEKYTTLRREIL 168
               LD   ++Q+ LN+F+  P  +Y   E ++  +  E+L
Sbjct:   645 DILDESFNSQEELNIFREVPYEQYEEEENEWKHISEELL 683

 Score = 66 (28.3 bits), Expect = 8.0e-46, Sum P(3) = 8.0e-46
 Identities = 12/26 (46%), Positives = 21/26 (80%)

Query:   180 LVALRRTIYLTIHSSLDFEDCLINKM 205
             L+ LR+ +YL+I SSL +E+C ++K+
Sbjct:   770 LINLRKNVYLSIMSSLSYEEC-VHKL 794

 Score = 44 (20.5 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query:    87 KGKLEKRVQYMIEVLAQVRKDNFKDFPD 114
             K K EK ++  ++V + +RKDN K  PD
Sbjct:   103 KKKDEKELK--VKVASHIRKDNNK-IPD 127


>UNIPROTKB|Q8I540 [details] [associations]
            symbol:PFL1855w "Cell cycle control protein, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0005575
            "cellular_component" evidence=ND] [GO:0051726 "regulation of cell
            cycle" evidence=ISS] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 SMART:SM00543 SUPFAM:SSF48371 GO:GO:0003677
            GO:GO:0003723 GO:GO:0051726 EMBL:AE014188 GO:GO:0016070
            Gene3D:1.25.40.180 KO:K13100 InterPro:IPR003891 Pfam:PF02847
            SMART:SM00544 PROSITE:PS51366 RefSeq:XP_001350777.1
            ProteinModelPortal:Q8I540 IntAct:Q8I540 MINT:MINT-1580329
            EnsemblProtists:PFL1855w:mRNA GeneID:811423 KEGG:pfa:PFL1855w
            EuPathDB:PlasmoDB:PF3D7_1238300 HOGENOM:HOG000283489
            ProtClustDB:CLSZ2848125 Uniprot:Q8I540
        Length = 967

 Score = 314 (115.6 bits), Expect = 8.0e-46, Sum P(3) = 8.0e-46
 Identities = 60/117 (51%), Positives = 78/117 (66%)

Query:   200 CLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEE 259
             C + K+Y    E+ F  S++T HRL+  KLRN +KFFAH L+TDAI W +   I L EE+
Sbjct:   833 CKLKKIYQENFEKCFDNSFNTAHRLETAKLRNCSKFFAHLLYTDAISWSIFKIIKLTEED 892

Query:   260 TTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             TTSS RIFIKIL QEL+  +GL     KI  P ++P + G+FP +N +N RF INFF
Sbjct:   893 TTSSTRIFIKILLQELTNNLGLQAFYHKINHPAISPFLIGLFPTNNAQNIRFCINFF 949

 Score = 189 (71.6 bits), Expect = 7.5e-12, P = 7.5e-12
 Identities = 38/64 (59%), Positives = 44/64 (68%)

Query:    16 KLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQK 75
             KLRN +KFFAH L+TDAI W +   I L EE+TTSS RIFIKIL QEL+  +GL     K
Sbjct:   861 KLRNCSKFFAHLLYTDAISWSIFKIIKLTEEDTTSSTRIFIKILLQELTNNLGLQAFYHK 920

Query:    76 IKDP 79
             I  P
Sbjct:   921 INHP 924

 Score = 163 (62.4 bits), Expect = 8.0e-46, Sum P(3) = 8.0e-46
 Identities = 50/159 (31%), Positives = 83/159 (52%)

Query:    19 NVAKFFAH----QLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSE-YMGLSKLN 73
             N  KF AH    ++  + +G  +  C  L +  T  S ++    L  E+ E Y  + +  
Sbjct:   529 NTVKFIAHMINQRIVHEIVGLQL--CSLLLQNITNDSVQVCTYFL-AEVGELYTNICRKG 585

Query:    74 QKIK-DPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTH-L 131
               I  D  + + + +G++  + QY IE L   RK+NFKDFP V +DL+L+ EEDK  H +
Sbjct:   586 LDIIFDRLKDIIQ-EGQINIKTQYDIEKLWNYRKNNFKDFPSVHDDLNLIDEEDKIVHEI 644

Query:   132 MTLDGVKDTQDILNVFQYDP--EYLMNEEKYTTLRREIL 168
               LD   ++Q+ LN+F+  P  +Y   E ++  +  E+L
Sbjct:   645 DILDESFNSQEELNIFREVPYEQYEEEENEWKHISEELL 683

 Score = 66 (28.3 bits), Expect = 8.0e-46, Sum P(3) = 8.0e-46
 Identities = 12/26 (46%), Positives = 21/26 (80%)

Query:   180 LVALRRTIYLTIHSSLDFEDCLINKM 205
             L+ LR+ +YL+I SSL +E+C ++K+
Sbjct:   770 LINLRKNVYLSIMSSLSYEEC-VHKL 794

 Score = 44 (20.5 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query:    87 KGKLEKRVQYMIEVLAQVRKDNFKDFPD 114
             K K EK ++  ++V + +RKDN K  PD
Sbjct:   103 KKKDEKELK--VKVASHIRKDNNK-IPD 127


>CGD|CAL0000928 [details] [associations]
            symbol:orf19.1771 species:5476 "Candida albicans" [GO:0005684
            "U2-type spliceosomal complex" evidence=IEA] [GO:0071006 "U2-type
            catalytic step 1 spliceosome" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
            InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
            Pfam:PF02854 SMART:SM00543 CGD:CAL0000928 GO:GO:0005737
            SUPFAM:SSF48371 GO:GO:0008380 GO:GO:0003677 GO:GO:0006397
            GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.180 eggNOG:NOG293831
            KO:K13100 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
            PROSITE:PS51366 EMBL:AACQ01000104 EMBL:AACQ01000105
            RefSeq:XP_714376.1 RefSeq:XP_714416.1 ProteinModelPortal:Q59XY0
            STRING:Q59XY0 GeneID:3643938 GeneID:3643966 KEGG:cal:CaO19.1771
            KEGG:cal:CaO19.9340 Uniprot:Q59XY0
        Length = 648

 Score = 174 (66.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
 Identities = 39/112 (34%), Positives = 65/112 (58%)

Query:   212 QIFRESYSTVHRLDINKLRNVAKFFAHQLFTDAIGW-HVLSCIHLNEEETTSSGRIFIKI 270
             ++F+  Y  +   + N LRN+ KFF H   +D +      S I L E++T  + RI +K 
Sbjct:   417 KLFKYYYDIIENFETNSLRNLGKFFGHLFASDKLALDQAWSNIKLTEQDTNPAKRILLKF 476

Query:   271 LFQELSEYMGLSKLNQK-IKDPLLAPAMEGVFPRDNP--KNT---RFAINFF 316
             +FQE+ E +G++++ ++ I D  L P ++G+FP  N   K+    RF+INFF
Sbjct:   477 IFQEMIEELGINEVKERLINDDYLKPYIKGIFPVINVDGKDADAIRFSINFF 528

 Score = 149 (57.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
 Identities = 31/72 (43%), Positives = 48/72 (66%)

Query:    98 IEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQYDPEYLMNE 157
             IE + ++ +++FK+   +   LDLV  EDK TH++TL+    ++D LNVF  D EYL +E
Sbjct:   222 IEYILKLARNDFKNISIIKNGLDLVETEDKETHVITLEDKLYSRDHLNVFSVDEEYLDHE 281

Query:   158 EKYTTLRREILG 169
              +Y  L++EILG
Sbjct:   282 NEYIELKKEILG 293

 Score = 48 (22.0 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
 Identities = 20/85 (23%), Positives = 42/85 (49%)

Query:   178 TNLVALRRTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYSTVHRLDINKLRNVAKFFA 237
             + L+  ++T+YLTI SS+  ++  ++K+    L+  F+           NK++N  K   
Sbjct:   324 SELLQYQKTVYLTIMSSMSSDEA-VHKL----LKLNFKSKIK-------NKIKNKTKTKT 371

Query:   238 HQLFTDAIGWHVLSCIHLNEEETTS 262
             +    + +   V+ C   ++E+T S
Sbjct:   372 NSNDNEILADMVIKCC--SQEKTYS 394


>RGD|1590641 [details] [associations]
            symbol:LOC680519 "similar to CG12750-PA" species:10116 "Rattus
            norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic process"
            evidence=IEA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 RGD:1590641
            SUPFAM:SSF48371 GO:GO:0003677 GO:GO:0003723 GO:GO:0016070
            Gene3D:1.25.40.180 GeneTree:ENSGT00650000093379 OrthoDB:EOG4JM7P4
            IPI:IPI00766583 Ensembl:ENSRNOT00000058354 UCSC:RGD:1590641
            Uniprot:D3ZEL0
        Length = 453

 Score = 248 (92.4 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 61/156 (39%), Positives = 95/156 (60%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRIFIKILFQELSEYMGLSKLNQK- 75
             +KF AH L    +   VL C+     L E  T  S  + I  L +E    + L++++ + 
Sbjct:   258 SKFVAH-LTNQNVAHEVL-CLEILTLLLERPTDDSVEVAIGFL-KECG--LKLTQVSPRG 312

Query:    76 ---IKDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLM 132
                I +  R +   + +++KRVQYMIEV+  VRKD FKD P ++E LDLV E+D+FTH++
Sbjct:   313 INAIFERLRNIVH-ESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHML 371

Query:   133 TLDGVKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
              L+   + +D+LNVF+ DP ++ NEEKY  +++EIL
Sbjct:   372 PLEDDYNPEDVLNVFKMDPNFMENEEKYKVIKKEIL 407


>UNIPROTKB|F1LX25 [details] [associations]
            symbol:F1LX25 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0016070 "RNA metabolic process"
            evidence=IEA] InterPro:IPR016021 InterPro:IPR016024 SUPFAM:SSF48371
            GO:GO:0016070 Gene3D:1.25.40.180 IPI:IPI00948250
            Ensembl:ENSRNOT00000065422 Uniprot:F1LX25
        Length = 211

 Score = 200 (75.5 bits), Expect = 5.1e-16, P = 5.1e-16
 Identities = 48/120 (40%), Positives = 70/120 (58%)

Query:    89 KLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDGVKDTQDILNVFQ 148
             ++ KRVQYMIEV+  VRKD FK  P ++E LDLV E+ +FT ++ L+   + +D+ NVF+
Sbjct:    86 EVNKRVQYMIEVMFAVRKDGFKGHPVILEGLDLVEEDCQFTQMLPLEDNYNPEDV-NVFK 144

Query:   149 YDPEYLMNEEKYTTLRREIL--GXXXXXX------------XXTNLVALRRTIYLTIHSS 194
              DP ++ N EKY  +++EIL  G                     NL++  RTIYL I S+
Sbjct:   145 TDPNFMENGEKYKVIKKEILDEGDSDSNTDQEVGTITIRDKTEINLLSFHRTIYLAIQST 204


>UNIPROTKB|F1M323 [details] [associations]
            symbol:F1M323 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0016070 "RNA metabolic
            process" evidence=IEA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SUPFAM:SSF48371 GO:GO:0003677
            GO:GO:0003723 GO:GO:0016070 Gene3D:1.25.40.180 IPI:IPI00562844
            Ensembl:ENSRNOT00000029211 OMA:IERRVEY Uniprot:F1M323
        Length = 226

 Score = 185 (70.2 bits), Expect = 3.1e-14, P = 3.1e-14
 Identities = 56/152 (36%), Positives = 81/152 (53%)

Query:    21 AKFFAHQLFTDAIGWHVLSCIH----LNEEETTSSGRIFIKILFQELSEYMGLSKLNQKI 76
             +KF AH L    +   VL C+     L E  T  S    +++    L E  GL KL +  
Sbjct:    21 SKFVAH-LINQNVAHEVL-CLEMLTLLLERPTDDS----VEVALGFLKE-CGL-KLARVT 72

Query:    77 KDPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDKFTHLMTLDG 136
             K   R       ++  RVQYMIEV+  + KD FKD   ++E LDL+ E   FTH+++L+ 
Sbjct:    73 K---RGNILHDSEINTRVQYMIEVM--LAKDRFKDQSVILEGLDLLEEGGHFTHMLSLED 127

Query:   137 VKDTQDILNVFQYDPEYLMNEEKYTTLRREIL 168
                 +D+LNVF+  P ++ NEEKY  ++ EIL
Sbjct:   128 DYSPEDVLNVFKTGPSFMENEEKYKAIKNEIL 159


>TAIR|locus:504956291 [details] [associations]
            symbol:AT1G52325 "AT1G52325" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GO:GO:0003743 InterPro:IPR003891
            Pfam:PF02847 IPI:IPI00525693 RefSeq:NP_683421.1 UniGene:At.20580
            UniGene:At.52154 EnsemblPlants:AT1G52325.1 GeneID:841663
            KEGG:ath:AT1G52325 OMA:ETFESIF PhylomeDB:F4ICW3 Uniprot:F4ICW3
        Length = 145

 Score = 151 (58.2 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 28/59 (47%), Positives = 42/59 (71%)

Query:   258 EETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGVFPRDNPKNTRFAINFF 316
             E++TSS  IF+K LF +LSE + +  LN+K++DP +    E +FP+D+ KNT F+I FF
Sbjct:    46 EDSTSSSLIFLKTLFLQLSELLRIKLLNEKLQDPTMEETFESIFPKDHRKNTLFSIIFF 104


>SGD|S000003510 [details] [associations]
            symbol:CWC22 "Spliceosome-associated protein that is required
            for pre-mRNA splicing" species:4932 "Saccharomyces cerevisiae"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0071006 "U2-type
            catalytic step 1 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0005684 "U2-type spliceosomal complex" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0003674 "molecular_function" evidence=ND] [GO:0016070 "RNA
            metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003890 InterPro:IPR016021
            InterPro:IPR016024 Pfam:PF02854 SMART:SM00543 SGD:S000003510
            GO:GO:0005737 SUPFAM:SSF48371 EMBL:BK006941 GO:GO:0003677
            GO:GO:0003723 GO:GO:0000398 Gene3D:1.25.40.180 GO:GO:0005684
            eggNOG:NOG293831 GeneTree:ENSGT00650000093379 KO:K13100
            InterPro:IPR003891 Pfam:PF02847 SMART:SM00544 PROSITE:PS51366
            OrthoDB:EOG4KPXKV EMBL:Z73063 PIR:S64613 RefSeq:NP_011794.3
            RefSeq:NP_011800.3 ProteinModelPortal:P53333 DIP:DIP-1869N
            IntAct:P53333 MINT:MINT-408252 STRING:P53333 PaxDb:P53333
            PeptideAtlas:P53333 EnsemblFungi:YGR278W GeneID:853195
            GeneID:853201 KEGG:sce:YGR278W KEGG:sce:YGR284C CYGD:YGR278w
            HOGENOM:HOG000112091 OMA:QITHRIG NextBio:973356
            Genevestigator:P53333 GermOnline:YGR278W Uniprot:P53333
        Length = 577

 Score = 161 (61.7 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 39/137 (28%), Positives = 73/137 (53%)

Query:   182 ALRRTIYLTIHSSLDFEDCLINKMYVAPLEQIFRESYST-VHRLDINKLRNVAKFFAHQL 240
             +L+ + +   +S L       ++ +     + F ++Y+  +   + ++LR + KF+ H +
Sbjct:   333 SLQESTFSKFYSILSERMITFHRSWQTAYNETFEQNYTQDIEDYETDQLRILGKFWGHLI 392

Query:   241 FTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQKIKDPLLAPAMEGV 300
               + +    L  I L EEE+   GRIFIK LFQEL   +GL +L  ++    L    +G+
Sbjct:   393 SYEFLPMDCLKIIKLTEEESCPQGRIFIKFLFQELVNELGLDELQLRLNSSKL----DGM 448

Query:   301 FPRD-NPKNTRFAINFF 316
             FP + + ++ R++INFF
Sbjct:   449 FPLEGDAEHIRYSINFF 465

 Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
 Identities = 31/116 (26%), Positives = 57/116 (49%)

Query:    16 KLRNVAKFFAHQLFTDAIGWHVLSCIHLNEEETTSSGRIFIKILFQELSEYMGLSKLNQK 75
             +LR + KF+ H +  + +    L  I L EEE+   GRIFIK LFQEL   +GL +L  +
Sbjct:   380 QLRILGKFWGHLISYEFLPMDCLKIIKLTEEESCPQGRIFIKFLFQELVNELGLDELQLR 439

Query:    76 IK----DPFRPVARWKGKLEKRVQYMIEVLAQVRKDNFKDFPDVIEDLDLVPEEDK 127
             +     D   P+      +   + +   +   +  ++ +    +I++++   EE+K
Sbjct:   440 LNSSKLDGMFPLEGDAEHIRYSINFFTAIGLGLLTEDMRSRLTIIQEVEDAEEEEK 495


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.140   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      316       308   0.00078  116 3  11 22  0.47    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  30
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  199 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:06
  No. of threads or processors used:  24
  Search cpu time:  27.25u 0.07s 27.32t   Elapsed:  00:00:23
  Total cpu time:  27.25u 0.07s 27.32t   Elapsed:  00:00:29
  Start:  Thu Aug 15 13:40:14 2013   End:  Thu Aug 15 13:40:43 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Homo sapiens	6.1e-69
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Gallus gallus	1.5e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Uncharacterized protein	protein from Bos taurus	2.2e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Uncharacterized protein	protein from Sus scrofa	2.3e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Homo sapiens	3.9e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Homo sapiens	3.9e-68
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Pongo abelii	1.0e-67
BLAST match view associations BLAST with ncm ncm ncm nucampholin	protein from Drosophila melanogaster	1.7e-67
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Pre-mRNA-splicing factor CWC22 homolog	protein from Gallus gallus	2.8e-66
BLAST match view associations BLAST with cwc22 cwc22 cwc22 CWC22 spliceosome-associated protein homolog (S. cerevisiae)	gene_product from Danio rerio	1.1e-62
BLAST match view associations BLAST with Cwc22 Cwc22 Cwc22 CWC22 spliceosome-associated protein homolog (S. cerevisiae)	gene from Rattus norvegicus	2.7e-61
BLAST match view associations BLAST with Cwc22 Cwc22 Cwc22 CWC22 spliceosome-associated protein homolog (S. cerevisiae)	protein from Mus musculus	2.8e-61
BLAST match view associations BLAST with cwc22 cwc22 cwc22 Pre-mRNA-splicing factor CWC22 homolog	protein from Xenopus laevis	5.7e-60
BLAST match view associations BLAST with AT1G80930 AT1G80930 AT1G80930	protein from Arabidopsis thaliana	3.9e-54
BLAST match view associations BLAST with let-858 let-858 let-858	gene from Caenorhabditis elegans	5.3e-52
BLAST match view associations BLAST with let-858 let-858 let-858 Pre-mRNA-splicing factor CWC22 homolog	protein from Caenorhabditis elegans	5.3e-52
BLAST match view associations BLAST with DDB_G0267796 DDB_G0267796 DDB_G0267796 initiation factor eIF-4 gamma, MA3 domain-containing protein	gene from Dictyostelium discoideum	3.3e-48
BLAST match view associations BLAST with PFL1855w PFL1855w PFL1855w cell cycle control protein, putative	gene from Plasmodium falciparum	8.0e-46
BLAST match view associations BLAST with PFL1855w PFL1855w PFL1855w Cell cycle control protein, putative	protein from Plasmodium falciparum 3D7	8.0e-46
BLAST match view associations BLAST with CWC22 CWC22 CWC22	gene_product from Candida albicans	1.1e-21
BLAST match view associations BLAST with LOC680519 LOC680519 LOC680519 similar to CG12750-PA	gene from Rattus norvegicus	1.3e-20
BLAST match view associations BLAST with AT1G52325 AT1G52325 AT1G52325	protein from Arabidopsis thaliana	2.3e-10
BLAST match view associations BLAST with CWC22 CWC22 CWC22 Spliceosome-associated protein that is required for pre-mRNA splicing	gene from Saccharomyces cerevisiae	6.1e-09