Query psy7811
Match_columns 94
No_of_seqs 105 out of 1019
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 19:25:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v26_A Myosin VI; calmodulin-b 100.0 2.6E-30 9E-35 203.5 4.5 92 3-94 434-530 (784)
2 4anj_A Unconventional myosin-V 100.0 8E-30 2.7E-34 205.2 4.5 92 3-94 438-534 (1052)
3 1lkx_A Myosin IE heavy chain; 100.0 6.1E-30 2.1E-34 199.5 3.4 92 3-94 367-464 (697)
4 1w7j_A Myosin VA; motor protei 100.0 4.7E-29 1.6E-33 196.6 5.3 91 3-94 418-514 (795)
5 1w9i_A Myosin II heavy chain; 99.9 5.3E-29 1.8E-33 195.7 5.0 92 3-94 436-534 (770)
6 4db1_A Myosin-7; S1DC, cardiac 99.9 8.3E-29 2.8E-33 194.9 4.9 91 3-94 442-539 (783)
7 1kk8_A Myosin heavy chain, str 99.9 1.6E-28 5.4E-33 194.4 3.9 91 3-94 441-538 (837)
8 2ycu_A Non muscle myosin 2C, a 99.9 3.8E-28 1.3E-32 194.9 4.9 92 3-94 413-514 (995)
9 2dfs_A Myosin-5A; myosin-V, in 99.9 3.5E-28 1.2E-32 196.3 4.7 91 3-94 418-514 (1080)
10 1g8x_A Myosin II heavy chain f 99.9 4.6E-28 1.6E-32 194.6 5.1 92 3-94 436-534 (1010)
11 1i84_S Smooth muscle myosin he 99.9 1.5E-27 5.1E-32 193.7 4.2 74 21-94 469-545 (1184)
12 1y4m_A HERV-FRD_6P24.1 proviru 34.6 14 0.00048 19.5 0.9 25 70-94 25-49 (53)
13 1mof_A Moloney murine leukemia 29.0 18 0.00062 19.2 0.8 25 70-94 27-51 (55)
No 1
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=99.96 E-value=2.6e-30 Score=203.52 Aligned_cols=92 Identities=32% Similarity=0.555 Sum_probs=81.1
Q ss_pred ccceeeccCCCccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCcccccccCChHHHHHH
Q psy7811 3 KLGVTITSHRRYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQL 77 (94)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~~dn~~~ldl 77 (94)
+||-.|........++|+ |+|+.|+|||||||||||+||++|++++|..+|++|.+|||.|.+++|.||++|+||
T Consensus 434 ~IN~~l~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idL 513 (784)
T 2v26_A 434 RVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 513 (784)
T ss_dssp HHHTTSCCSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHH
T ss_pred HHHHhcCcccccceeeecccCCcccCCcCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHH
Confidence 345445433333445555 999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCccccccchhcC
Q psy7811 78 VEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 78 i~~~p~Gll~lLDee~~ 94 (94)
|+++|+|||++|||||+
T Consensus 514 ie~kp~GIlslLDEe~~ 530 (784)
T 2v26_A 514 IEARLVGILDILDEENR 530 (784)
T ss_dssp HHCTTTSHHHHHHHHHH
T ss_pred HhhccccHHHHHHHHhc
Confidence 99999999999999994
No 2
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=99.96 E-value=8e-30 Score=205.17 Aligned_cols=92 Identities=32% Similarity=0.555 Sum_probs=82.1
Q ss_pred ccceeeccCCCccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCcccccccCChHHHHHH
Q psy7811 3 KLGVTITSHRRYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQL 77 (94)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~~dn~~~ldl 77 (94)
+||-.|........++|+ |+|+.|+|||||||||||+||++|++++|..+|++|.+|||.|.+++|.||++|+||
T Consensus 438 ~IN~~l~~~~~~~~IGILDI~GFE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idL 517 (1052)
T 4anj_A 438 RVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDL 517 (1052)
T ss_dssp HHHTTSCCSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHH
T ss_pred hhhcccccccccceEEEEecCCCcccccCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHH
Confidence 455555544444445555 999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCccccccchhcC
Q psy7811 78 VEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 78 i~~~p~Gll~lLDee~~ 94 (94)
|+++|+|||++|||||+
T Consensus 518 ie~kp~GIl~lLDEe~~ 534 (1052)
T 4anj_A 518 IEARLVGILDILDEENR 534 (1052)
T ss_dssp HHCTTTSHHHHHHHHHH
T ss_pred HHcCcccHHHHHHHHhc
Confidence 99999999999999994
No 3
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=99.95 E-value=6.1e-30 Score=199.47 Aligned_cols=92 Identities=36% Similarity=0.534 Sum_probs=80.9
Q ss_pred ccceeeccCCC-ccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCcccccccCChHHHHH
Q psy7811 3 KLGVTITSHRR-YHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQ 76 (94)
Q Consensus 3 ~~~~~i~~~~~-~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~~dn~~~ld 76 (94)
|||-.|..+.+ ...++|+ |+|+.|+|||||||||||+||++|++++|+.+|++|.+|||.|.+++|.||++|+|
T Consensus 367 ~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dN~~~id 446 (697)
T 1lkx_A 367 KINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICE 446 (697)
T ss_dssp HHHHHHCCCSCCCCEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHH
T ss_pred HHHhhcCCCCCCceeEEeeccccccccCcCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCHHHHH
Confidence 45555554332 2344554 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCccccccchhcC
Q psy7811 77 LVEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 77 li~~~p~Gll~lLDee~~ 94 (94)
||+++|+|||++|||||+
T Consensus 447 Lie~kp~GilslLDEec~ 464 (697)
T 1lkx_A 447 LIEKKPIGLISLLDEACL 464 (697)
T ss_dssp HTTSSSSSHHHHHHHHHH
T ss_pred HHhcccCChhhhhHHhhC
Confidence 999999999999999994
No 4
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=99.95 E-value=4.7e-29 Score=196.61 Aligned_cols=91 Identities=44% Similarity=0.698 Sum_probs=79.3
Q ss_pred ccceeeccCC-CccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCcccccccCChHHHHH
Q psy7811 3 KLGVTITSHR-RYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQ 76 (94)
Q Consensus 3 ~~~~~i~~~~-~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~~dn~~~ld 76 (94)
+||-.|.... ....++|+ |+|+.|+|||||||||||+||++|++++|..+|++|.+|||+|.+++|.||++|+|
T Consensus 418 ~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~id 497 (795)
T 1w7j_A 418 HVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCIN 497 (795)
T ss_dssp HHHHHHCCSSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHH
T ss_pred HHHHhhcCCccccceEEeeccCcccccCcCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccHHHHH
Confidence 3454454433 22334554 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCccccccchhcC
Q psy7811 77 LVEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 77 li~~~p~Gll~lLDee~~ 94 (94)
||+++ +|||++|||||+
T Consensus 498 Lie~~-~GIlslLDEec~ 514 (795)
T 1w7j_A 498 LIEAK-MGVLDLLDEECK 514 (795)
T ss_dssp HHHST-TSHHHHHHHHHT
T ss_pred HHHhc-CCHHHhhhhhcc
Confidence 99986 999999999995
No 5
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=99.95 E-value=5.3e-29 Score=195.68 Aligned_cols=92 Identities=42% Similarity=0.743 Sum_probs=79.6
Q ss_pred ccceeeccCCCccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCccccccc-CChHHHHH
Q psy7811 3 KLGVTITSHRRYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQ 76 (94)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~-~dn~~~ld 76 (94)
+||-.|........++++ |+|+.|+|||||||||||+||++|++++|..+|++|.+|||.|..++| .||++|+|
T Consensus 436 ~IN~~l~~~~~~~~IGvLDI~GFE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~id 515 (770)
T 1w9i_A 436 KINNVLCQERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATID 515 (770)
T ss_dssp HHHHHHCCSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHH
T ss_pred HHHHHhcCCCCCCeeeeccCccccccccCCHHHHHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeeccccCcHHHHH
Confidence 345555443332334444 999999999999999999999999999999999999999999999999 59999999
Q ss_pred HHhcC-CCccccccchhcC
Q psy7811 77 LVEGK-PNGLLCVLDDQAK 94 (94)
Q Consensus 77 li~~~-p~Gll~lLDee~~ 94 (94)
||+++ |+|||++|||||+
T Consensus 516 Liek~~p~GilslLDEec~ 534 (770)
T 1w9i_A 516 LIDGRQPPGILALLDEQSV 534 (770)
T ss_dssp HHHCTTTTCHHHHHHHHHS
T ss_pred HHhCCCCCchhhhhhhhhC
Confidence 99984 9999999999995
No 6
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=99.95 E-value=8.3e-29 Score=194.90 Aligned_cols=91 Identities=40% Similarity=0.761 Sum_probs=77.6
Q ss_pred ccceeeccCC-CccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCccccccc-CChHHHH
Q psy7811 3 KLGVTITSHR-RYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCL 75 (94)
Q Consensus 3 ~~~~~i~~~~-~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~-~dn~~~l 75 (94)
+||-.|.... ....++|+ |+|+.|+|||||||||||+||++|++++|+.+|++|.+|||.|..++| .||++|+
T Consensus 442 ~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~i 521 (783)
T 4db1_A 442 RINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACI 521 (783)
T ss_dssp HHHHHHCCSCCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHHH
T ss_pred HHHHhcCCCCCCCceEEEeccccccccccCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCCcccccccCChHHHH
Confidence 4444454432 22334444 999999999999999999999999999999999999999999999999 6999999
Q ss_pred HHHhcCCCccccccchhcC
Q psy7811 76 QLVEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 76 dli~~~p~Gll~lLDee~~ 94 (94)
|||++ |+|||++|||||+
T Consensus 522 dLiek-p~Gil~lLDEec~ 539 (783)
T 4db1_A 522 DLIEK-PMGIMSILEEECM 539 (783)
T ss_dssp HHHHS-TTSHHHHHCC-TT
T ss_pred HHHhC-CCchHhhhhHHhc
Confidence 99995 8999999999995
No 7
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=99.94 E-value=1.6e-28 Score=194.40 Aligned_cols=91 Identities=42% Similarity=0.788 Sum_probs=79.0
Q ss_pred ccceeeccC-CCccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCccccccc-CChHHHH
Q psy7811 3 KLGVTITSH-RRYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCL 75 (94)
Q Consensus 3 ~~~~~i~~~-~~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~-~dn~~~l 75 (94)
+||-.|... ++...++++ |+|+.|+|||||||||||+||++|++++|..||++|.+|||.|.+++| .||++|+
T Consensus 441 ~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~i 520 (837)
T 1kk8_A 441 RVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCI 520 (837)
T ss_dssp HHHHHHCCCCCCCEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHH
T ss_pred HHHHhccCCCCCcceEEEEecCCccccccccHHHHHHHHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHHH
Confidence 445555432 223345555 999999999999999999999999999999999999999999999999 5999999
Q ss_pred HHHhcCCCccccccchhcC
Q psy7811 76 QLVEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 76 dli~~~p~Gll~lLDee~~ 94 (94)
|||++ |+|||++|||||+
T Consensus 521 dLiek-p~GIlslLDEec~ 538 (837)
T 1kk8_A 521 DLIEK-PMGILSILEEECM 538 (837)
T ss_dssp HHHHS-TTSHHHHHHHHTT
T ss_pred HHHhc-CCcHHHHHHHHhc
Confidence 99996 8999999999995
No 8
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.94 E-value=3.8e-28 Score=194.94 Aligned_cols=92 Identities=39% Similarity=0.684 Sum_probs=79.7
Q ss_pred ccceeeccCC--CccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCccccccc-CChHHH
Q psy7811 3 KLGVTITSHR--RYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLC 74 (94)
Q Consensus 3 ~~~~~i~~~~--~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~-~dn~~~ 74 (94)
+||-.|.... ....++|+ |+|+.|+|||||||||||+||++|++++|..+|++|.+|||.|.+++| .||++|
T Consensus 413 ~iN~~l~~~~~~~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~ 492 (995)
T 2ycu_A 413 RLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPC 492 (995)
T ss_dssp HHHHHHCCCSCCCSEEEEEEECCCBCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHH
T ss_pred HHHHHhcCCCCCccceEEEeccccccccccchHHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHH
Confidence 4455554332 22344555 999999999999999999999999999999999999999999999999 699999
Q ss_pred HHHHhc--CCCccccccchhcC
Q psy7811 75 LQLVEG--KPNGLLCVLDDQAK 94 (94)
Q Consensus 75 ldli~~--~p~Gll~lLDee~~ 94 (94)
+|||++ +|+|||++|||||+
T Consensus 493 idlie~~~~p~Gil~lLdee~~ 514 (995)
T 2ycu_A 493 IDLIERPANPPGLLALLDEECW 514 (995)
T ss_dssp HHHHHCCSSSCCHHHHHHHSSS
T ss_pred HHHHhccCCCCchhhhhHHHhc
Confidence 999998 48999999999995
No 9
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.94 E-value=3.5e-28 Score=196.30 Aligned_cols=91 Identities=44% Similarity=0.698 Sum_probs=79.3
Q ss_pred ccceeeccCC-CccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCcccccccCChHHHHH
Q psy7811 3 KLGVTITSHR-RYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQ 76 (94)
Q Consensus 3 ~~~~~i~~~~-~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~~dn~~~ld 76 (94)
+||-.|..+. ....++|+ |+|+.|+|||||||||||+||++|++++|..+|++|.+|||+|.+++|.||++|+|
T Consensus 418 ~iN~~l~~~~~~~~~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~id 497 (1080)
T 2dfs_A 418 HVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCIN 497 (1080)
T ss_dssp HHHHHHCCSSCCCEEEEEEEECCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHH
T ss_pred HHHHhhccccccCceEEeeccCCccccCcCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCccccccccccHHHHH
Confidence 3454454433 22345555 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCccccccchhcC
Q psy7811 77 LVEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 77 li~~~p~Gll~lLDee~~ 94 (94)
||+++ +|||++|||||+
T Consensus 498 lie~~-~Gil~lLdee~~ 514 (1080)
T 2dfs_A 498 LIEAK-MGVLDLLDEECK 514 (1080)
T ss_dssp HHHST-TSHHHHHHHHTT
T ss_pred HHhcC-Cceeeecccccc
Confidence 99986 999999999995
No 10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.94 E-value=4.6e-28 Score=194.61 Aligned_cols=92 Identities=43% Similarity=0.742 Sum_probs=80.1
Q ss_pred ccceeeccCCCccccccC-----CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCccccccc-CChHHHHH
Q psy7811 3 KLGVTITSHRRYHRRRLN-----PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQ 76 (94)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~-----e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~-~dn~~~ld 76 (94)
+||-.|....+...++|+ |+|+.|+|||||||||||+||++|++++|..+|++|.+|||.|.+++| .||++|+|
T Consensus 436 ~IN~~l~~~~~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~id 515 (1010)
T 1g8x_A 436 KINNVLCSERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATID 515 (1010)
T ss_dssp HHHHHHCCSSCSEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHH
T ss_pred HHHHHhcCCCcCceeeeccCcccccCCcCcHHHHHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCccccccccChHHHHH
Confidence 455555543333344544 999999999999999999999999999999999999999999999999 59999999
Q ss_pred HHhc-CCCccccccchhcC
Q psy7811 77 LVEG-KPNGLLCVLDDQAK 94 (94)
Q Consensus 77 li~~-~p~Gll~lLDee~~ 94 (94)
||++ +|+|||++|||||+
T Consensus 516 lie~~~~~Gil~lLdee~~ 534 (1010)
T 1g8x_A 516 LIDGRQPPGILALLDEQSV 534 (1010)
T ss_dssp HHHCTTTTCHHHHHHHHTT
T ss_pred HHhcCCCCeeehhhhHHhC
Confidence 9998 49999999999995
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.93 E-value=1.5e-27 Score=193.69 Aligned_cols=74 Identities=47% Similarity=0.867 Sum_probs=70.5
Q ss_pred CCCCCCchhhHHHhhhhHHHHHHHHHHhhHhHHHhhhhcCCccccccc-CChHHHHHHHhcC--CCccccccchhcC
Q psy7811 21 PNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK--PNGLLCVLDDQAK 94 (94)
Q Consensus 21 e~~~~n~feql~iN~~nE~l~~~~~~~~f~~~~~~y~~Egi~~~~i~~-~dn~~~ldli~~~--p~Gll~lLDee~~ 94 (94)
|+|+.|+|||||||||||+||++|++++|..++++|.+|||.|.+++| .||++|+|||+++ |+|||++|||||+
T Consensus 469 E~f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~ 545 (1184)
T 1i84_S 469 EIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECW 545 (1184)
T ss_dssp CCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchhhhhhhhC
Confidence 999999999999999999999999999999999999999999999999 6999999999962 3499999999995
No 12
>1y4m_A HERV-FRD_6P24.1 provirus ancestral ENV polyprotei; coat protein, membrane fusion, endogenous retrovirus, membra protein; 1.60A {Homo sapiens} SCOP: h.3.2.1
Probab=34.65 E-value=14 Score=19.54 Aligned_cols=25 Identities=20% Similarity=0.363 Sum_probs=21.0
Q ss_pred ChHHHHHHHhcCCCccccccchhcC
Q psy7811 70 DNTLCLQLVEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 70 dn~~~ldli~~~p~Gll~lLDee~~ 94 (94)
.|.-.+|++..+..|+=..|.|+|.
T Consensus 25 QNRraLDlL~a~~GG~C~~l~e~CC 49 (53)
T 1y4m_A 25 QNRRGLDMLTAAQGGICLALDEKCC 49 (53)
T ss_dssp HHHHHHHHHTGGGTSHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhCCccHHhcCchh
Confidence 3677899998888899999999884
No 13
>1mof_A Moloney murine leukemia virus P15; glycoprotein, coat protein, polyprotein, transmembrane, SIGN protein; 1.70A {Moloney murine leukemia virus} SCOP: h.3.2.1
Probab=29.01 E-value=18 Score=19.24 Aligned_cols=25 Identities=28% Similarity=0.328 Sum_probs=20.9
Q ss_pred ChHHHHHHHhcCCCccccccchhcC
Q psy7811 70 DNTLCLQLVEGKPNGLLCVLDDQAK 94 (94)
Q Consensus 70 dn~~~ldli~~~p~Gll~lLDee~~ 94 (94)
.|.-.+|++..+..|+=..|.|+|.
T Consensus 27 QNRraLD~L~a~~GG~C~~l~e~CC 51 (55)
T 1mof_A 27 QNRRGLDLLFLKEGGLCAALKEECA 51 (55)
T ss_dssp HHHHHHHHHTGGGTCHHHHHTSCCC
T ss_pred HHHHHHHHHHHHhCCccHHHcCchh
Confidence 3677899998888899999998884
Done!