RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy7811
(94 letters)
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane,
vanadate, transport, PRE- powerstroke, transition state,
protein transport; HET: ADP; 1.75A {Sus scrofa} PDB:
2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Length = 784
Score = 126 bits (318), Expect = 1e-35
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 87
FEQ CINY NE LQ +FN+ + + EQE Y KEG+ + + DN C+ L+E + G+L
Sbjct: 464 FEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILD 523
Query: 88 VLDDQAK 94
+LD++ +
Sbjct: 524 ILDEENR 530
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter
domain, contractIle protein; HET: ADP; 3.00A
{Dictyostelium discoideum} SCOP: c.37.1.9
Length = 697
Score = 123 bits (312), Expect = 7e-35
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 87
FEQL IN+ NE LQ F + + EQEEY +EGI W++IE+ +N +L+E KP GL+
Sbjct: 398 FEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLIS 457
Query: 88 VLDDQ 92
+LD+
Sbjct: 458 LLDEA 462
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 120 bits (303), Expect = 1e-33
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 87
FEQ CINYANE LQ FN HVF+ EQEEY KE I W I+F DN C+ L+E G+L
Sbjct: 449 FEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIE-AKMGVLD 507
Query: 88 VLDDQ 92
+LD++
Sbjct: 508 LLDEE 512
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken,
molecular motor, ATPase, ELC, IQ motif, muscle protein,
ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1
c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Length = 795
Score = 120 bits (302), Expect = 2e-33
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 87
FEQ CINYANE LQ FN HVF+ EQEEY KE I W I+F DN C+ L+E G+L
Sbjct: 449 FEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIE-AKMGVLD 507
Query: 88 VLDDQ 92
+LD++
Sbjct: 508 LLDEE 512
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain,
mutant, muscle contraction; HET: ADP; 1.75A
{Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A*
1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A*
1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A*
1jx2_A* 3mjx_A* 2jhr_A* ...
Length = 770
Score = 115 bits (289), Expect = 1e-31
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGK-PNGL 85
FEQLCINY NE LQ +FN H+F+ EQEEY KE I W I+F D+ + L++G+ P G+
Sbjct: 466 FEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGI 525
Query: 86 LCVLDDQ 92
L +LD+Q
Sbjct: 526 LALLDEQ 532
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A
{Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Length = 995
Score = 114 bits (288), Expect = 2e-31
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEG--KPNG 84
FEQLCINY NE LQ FN +F EQEEY +EGI W ++F D C+ L+E P G
Sbjct: 445 FEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPG 504
Query: 85 LLCVLDDQ 92
LL +LD++
Sbjct: 505 LLALLDEE 512
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta,
contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB:
2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A*
1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A*
1o1g_A*
Length = 783
Score = 114 bits (287), Expect = 2e-31
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGKPNGLL 86
FEQLCIN+ NE LQ +FN H+F EQEEY KEGI W I+F D C+ L+E KP G++
Sbjct: 473 FEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIE-KPMGIM 531
Query: 87 CVLDDQ 92
+L+++
Sbjct: 532 SILEEE 537
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM,
protein engineering, structural protein; HET: ADP; 2.80A
{Dictyostelium discoideum} SCOP: k.1.1.1
Length = 1010
Score = 113 bits (286), Expect = 2e-31
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGK-PNGL 85
FEQLCINY NE LQ +FN H+F+ EQEEY KE I W I+F D+ + L++G+ P G+
Sbjct: 466 FEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGI 525
Query: 86 LCVLDDQ 92
L +LD+Q
Sbjct: 526 LALLDEQ 532
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of
motor, contractIle PROT; HET: ADP; 2.30A {Argopecten
irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A*
1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A*
2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A*
2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Length = 837
Score = 113 bits (285), Expect = 4e-31
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 28 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGKPNGLL 86
FEQLCINY NE LQ +FN H+F EQEEY KEGI W I+F D +C+ L+E KP G+L
Sbjct: 472 FEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGIL 530
Query: 87 CVLDDQ 92
+L+++
Sbjct: 531 SILEEE 536
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin
subfragment 2, heavy meromyosin, essential light chain,
motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP:
i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Length = 1184
Score = 111 bits (278), Expect = 3e-30
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 27 TFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGK--PN 83
+FEQLCINY NE LQ FN +F EQEEY +EGI W I+F D C++L+E P
Sbjct: 475 SFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPP 534
Query: 84 GLLCVLDDQAK 94
G+L +LD++
Sbjct: 535 GVLALLDEECW 545
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 30.6 bits (68), Expect = 0.051
Identities = 12/54 (22%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Query: 38 EHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLDD 91
E LQ Q + + I+ R L + N LL VL +
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-VLLN 252
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 25.6 bits (56), Expect = 2.3
Identities = 7/34 (20%), Positives = 11/34 (32%)
Query: 37 NEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSD 70
E + + Y K G++ HI D
Sbjct: 36 PEDWEIEESWGDKDYYLSILKKNGLQPLHIPIPD 69
>3rkx_A Biotin-[acetyl-COA-carboxylase] ligase; biotin protein ligase, 3
domains, enzyme DNA binding, biotin coupling domains;
2.10A {Staphylococcus aureus} PDB: 3rir_A* 3rkw_A
3rky_A* 3v7c_A* 3v7s_A* 4dq2_A*
Length = 323
Score = 25.7 bits (57), Expect = 2.6
Identities = 12/97 (12%), Positives = 23/97 (23%), Gaps = 32/97 (32%)
Query: 3 KLGVTITSHRR--YHRRRLNPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEG 60
G I S + L P + + ++Y K
Sbjct: 45 LEGCKIDSVNHKGH---LLQQLPDIWYQGII----------------------DQYTKSS 79
Query: 61 IRWRHIEFSD-----NTLCLQLVEGKPNGLLCVLDDQ 92
+ E D + + G + + D+Q
Sbjct: 80 ALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQ 116
>3f5f_A Maltose-binding periplasmic protein, heparan sulfate
2-O-sulfotransferase 1; maltose binding protein, fusion,
heparan sulfate biosynthesis; HET: GLC A3P; 2.65A
{Escherichia coli k-12}
Length = 658
Score = 25.3 bits (55), Expect = 3.2
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 10 SHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYFNQHVFQY 51
SH R + P + I Q + E+ Y F FQ+
Sbjct: 587 SHLRKTTEKKLPTAATIAKLQQSEIWKMENEFYEFALEQFQF 628
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural
genomics, PSI-2, protein structure initiative; HET:
FAD; 2.60A {Enterococcus faecalis}
Length = 452
Score = 25.1 bits (56), Expect = 3.6
Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYYFNQHVFQYEQ------EEYNKEGI 61
R+ P + ++ + Y + L YFN + + + EE ++ I
Sbjct: 22 RKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKI 73
>3unf_N Proteasome subunit beta type-9; antigen presentation, drug
development, protein degradation, hydrolase-hydrolase
inhibitor complex; HET: 04C; 2.90A {Mus musculus} PDB:
3unh_N
Length = 199
Score = 24.8 bits (55), Expect = 3.9
Identities = 5/37 (13%), Positives = 11/37 (29%)
Query: 8 ITSHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYF 44
H L P V+ + N + ++ +
Sbjct: 59 AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLL 95
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 24.6 bits (53), Expect = 5.1
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 51 YEQEEYNKEGIRWRHIEFSDNT 72
+ Y + GI H +D
Sbjct: 91 NLLDLYQQCGIITHHHPIADGG 112
>2oqr_A Sensory transduction protein REGX3; response regulator,
winged-helix-turn-helix, DNA-binding, 3D swapping, two
component system; 2.03A {Mycobacterium tuberculosis
H37RV}
Length = 230
Score = 24.8 bits (55), Expect = 5.2
Identities = 3/23 (13%), Positives = 8/23 (34%)
Query: 12 RRYHRRRLNPNPSVITFEQLCIN 34
RR + V+ + ++
Sbjct: 120 RRGGDDDSEMSDGVLESGPVRMD 142
>1iru_H 20S proteasome; cell cycle, immune response, proteolysis,
ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP:
d.153.1.4 PDB: 3unb_N* 3une_N
Length = 205
Score = 24.5 bits (54), Expect = 5.6
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 8 ITSHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYF 44
+T +H LN P V T L + +
Sbjct: 59 VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLM 95
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A
{Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A*
1f8w_A*
Length = 447
Score = 24.7 bits (55), Expect = 5.9
Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYYFNQHVFQYEQ------EEYNKEGI 61
L+P+ + +E+ I++ + +Q Y V E+ G+
Sbjct: 20 LNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGV 71
>1yqz_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD;
1.54A {Staphylococcus aureus}
Length = 438
Score = 24.8 bits (55), Expect = 6.0
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYY 43
RRL+ +I FE+ +++AN L Y
Sbjct: 21 RRLDKESDIIIFEKDRDMSFANCALPYV 48
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A
{Lactobacillus sanfranciscensis}
Length = 452
Score = 24.4 bits (54), Expect = 6.3
Identities = 8/54 (14%), Positives = 19/54 (35%), Gaps = 9/54 (16%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYYFNQHVFQYEQ--------EEYNKEGI 61
+P+ V +E I++ + + Y + + + EE + G
Sbjct: 20 IADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGA 73
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase,
structural genomics structure initiative; 2.75A
{Pyrococcus horikoshii}
Length = 449
Score = 24.4 bits (54), Expect = 6.9
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYY 43
+RL P V FE +++A + Y
Sbjct: 23 KRLKPEWDVKVFEATEWVSHAPCGIPYV 50
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A,
flavin adenine dinucleotide, selenomethionine, F
flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis
str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Length = 480
Score = 24.4 bits (54), Expect = 7.3
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYY 43
R + N +V+T E+ +YA L Y
Sbjct: 56 VRNDENANVVTLEKGEIYSYAQCGLPYV 83
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase;
structural genomics, PSI-2, protein structur
initiative; 2.30A {Desulfovibrio vulgaris}
Length = 472
Score = 24.4 bits (54), Expect = 7.7
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYY 43
+RL+P V +Q I+Y + YY
Sbjct: 23 KRLDPEAHVTMIDQASRISYGGCGIPYY 50
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide
oxidoreductase class I, rhodan coenzyme A, flavin
adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus
anthracis} PDB: 3icr_A* 3ict_A*
Length = 588
Score = 24.5 bits (54), Expect = 8.0
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYY 43
RRL+ +I E+ I++AN L YY
Sbjct: 56 RRLSEEDEIIMVERGEYISFANCGLPYY 83
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics,
NPPSFA, national project on prote structural and
functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Length = 375
Score = 24.4 bits (54), Expect = 8.1
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 12 RRYHRRRLNPNPSVITFEQ 30
R+Y R + I+FE
Sbjct: 107 RKYWRDKGKNKWKFISFEN 125
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA,
persulfide reductase, rhodanese; HET: COA FAD; 1.99A
{Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Length = 565
Score = 24.1 bits (53), Expect = 8.1
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 17 RRLNPNPSVITFEQ-LCINYANEHLQYY 43
RRL+ +I FE+ +++AN L Y+
Sbjct: 21 RRLSETAEIIMFERGEYVSFANCGLPYH 48
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine
aminotransferase (EC 2.6.1.11) (ACOA structural
genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8}
PDB: 2e54_A*
Length = 397
Score = 24.0 bits (53), Expect = 8.2
Identities = 2/19 (10%), Positives = 9/19 (47%)
Query: 12 RRYHRRRLNPNPSVITFEQ 30
R+Y +++ +++
Sbjct: 118 RKYGKKKSEKKYRILSAHN 136
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 24.2 bits (52), Expect = 8.3
Identities = 10/68 (14%), Positives = 22/68 (32%)
Query: 5 GVTITSHRRYHRRRLNPNPSVITFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWR 64
I + R RL + E + N ++ + Y+ + + G
Sbjct: 184 DRFIAFCGPHSRARLESGYHQHSPETYIQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHH 243
Query: 65 HIEFSDNT 72
+ F+D +
Sbjct: 244 DLFFADGS 251
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa,
MSGPP, unknown function; HET: MSE EPE; 2.30A
{Leishmania major}
Length = 167
Score = 24.2 bits (52), Expect = 8.6
Identities = 5/20 (25%), Positives = 6/20 (30%)
Query: 51 YEQEEYNKEGIRWRHIEFSD 70
Y+ GI F D
Sbjct: 59 YDATLVKSRGIDVHSWPFDD 78
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.138 0.433
Gapped
Lambda K H
0.267 0.0834 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,502,333
Number of extensions: 75086
Number of successful extensions: 232
Number of sequences better than 10.0: 1
Number of HSP's gapped: 223
Number of HSP's successfully gapped: 51
Length of query: 94
Length of database: 6,701,793
Length adjustment: 61
Effective length of query: 33
Effective length of database: 4,998,612
Effective search space: 164954196
Effective search space used: 164954196
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.2 bits)