BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7814
(460 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383862215|ref|XP_003706579.1| PREDICTED: TNF receptor-associated factor 6-like [Megachile
rotundata]
Length = 416
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 231/452 (51%), Gaps = 84/452 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDN 71
L+PRFEC ICL +L+D +LTSCGHKFC+ CI +W+ +G CP+D K L ++ D+F D
Sbjct: 28 LEPRFECPICLTWLRDPVLTSCGHKFCSQCIYTWLQKEGA-CCPVDSKPLKSESDLFRDL 86
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
YT REI + + CPY+Q C LS + ESH++ C K
Sbjct: 87 YTSREISQQRMHCPYQQFGCEVNLSPVDMESHISQCMFK--------------------- 125
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
Q S++E C F VGC E F ++ L H + +
Sbjct: 126 ----------------------GQLSNSETMHCHFKNVGCTETFCTEEDLHTHLERNINQ 163
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
HL ++ Q+++++ + A + ESKLWDP A +
Sbjct: 164 HLTMVVKAL--------------PQESASRNNVSALVA-----ESKLWDPPSKNASSLEK 204
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI----EDNVV 305
+E + LLK +YER+VLLEQ E I V+N + L + ++ V
Sbjct: 205 TEPSLEWQ------QLLKNLYERIVLLEQQNRELSITVSNQKTQLTTLQTSLRFNQEEVF 258
Query: 306 LKLCNGVYFWKMYNFPAKLKEM-KEINRYFYSACFYSSCFGYRFCTRVNISREDAQYLSL 364
L+ CNGVY W++++F KL M + + FYS FY+S GY+ C R+N+S +D ++LSL
Sbjct: 259 LRSCNGVYIWRLHSFQEKLHSMMSDPLKMFYSPGFYTSLHGYKICARINVSSKDPEFLSL 318
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSS-EFSITDEIQSDKNFDSFKRPVNFFLNKKA 423
+H+++ ENDD LDWPF G + F ++ + E I + S N ++F++PV LNK++
Sbjct: 319 LLHIMKSENDDGLDWPFNGTMCFILVHPHNCEKDIREVTSSRPNLEAFRKPV-CELNKRS 377
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FG+ F+R+ D+ D +++D+ + + +V
Sbjct: 378 FGYTEFVRIRDLPD-----FVQNDSLIFRIEV 404
>gi|328782285|ref|XP_624207.3| PREDICTED: TNF receptor-associated factor 6 [Apis mellifera]
Length = 422
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 232/455 (50%), Gaps = 84/455 (18%)
Query: 10 KLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIF 68
K +L+PRFEC ICL +L+D +LTSCGHKFC+ CI +W+ +G CP+D K L ++ D+F
Sbjct: 25 KESLEPRFECPICLTWLRDPVLTSCGHKFCSQCIYTWLQKEGA-CCPVDSKPLKSESDLF 83
Query: 69 IDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFR 126
D YT REI + CPY+Q C ++S + E+H+N C K + P
Sbjct: 84 RDLYTSREISQQRTPCPYQQFGCEIKVSPVDMETHINECTYKRTLPD------------- 130
Query: 127 NTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK 186
++N C F +VGC E F ++ L H +
Sbjct: 131 ------------------------------SQNVYCPFKKVGCMETFPTEKDLHTHLEKN 160
Query: 187 TSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGD 246
+ HL ++ K S S N N I A ESKLWDP
Sbjct: 161 INIHLTMIL-KILPQISVSQN----------NINAIAA--------ESKLWDPPPKSTSC 201
Query: 247 DKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI----ED 302
+ SE + LLK +YER+V+LEQ E I V+N + L + ++
Sbjct: 202 MEKSEPSLEWQ------QLLKNLYERIVVLEQQNRELSITVSNQKTQLTTLQTSLRFNQE 255
Query: 303 NVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISREDAQY 361
+ L+ CNGVY W++++F KL+ M + + FYS FY+S GY+ C R+N+S +D ++
Sbjct: 256 EMFLRSCNGVYIWRLHSFHEKLESMMNDSLKMFYSPGFYTSPNGYKICARINVSSKDPEF 315
Query: 362 LSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLN 420
LSL +H+++ ENDD LDWPF G + F ++ +SE I + S + ++F++P+ LN
Sbjct: 316 LSLLLHIMKSENDDGLDWPFNGTMYFVLVHPLNSERDIREITSSRPDLEAFRKPI-CELN 374
Query: 421 KKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
K++FG+ F+R+ D+LD +++D + +V
Sbjct: 375 KRSFGYTEFVRIRDLLD-----FLQNDCLTFRIEV 404
>gi|380013177|ref|XP_003690643.1| PREDICTED: TNF receptor-associated factor 6-B-like [Apis florea]
Length = 399
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 233/453 (51%), Gaps = 86/453 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDN 71
L+PRFEC ICL +L+D +LTSCGHKFC+ CI +W+ +G CP+D K L ++ D+F D
Sbjct: 5 LEPRFECPICLTWLRDPVLTSCGHKFCSQCIYTWLQKEGA-CCPVDSKPLKSESDLFRDL 63
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
YT REI + CPY+Q C ++S + E+H+N C K + P
Sbjct: 64 YTSREISQQRTPCPYQQFGCEIKVSPVDMETHINECTYKRTLPD---------------- 107
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
++N C F VGC E F ++ L H + +
Sbjct: 108 ---------------------------SQNVYCPFKNVGCMETFPNEEDLHAHLEKNINI 140
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPN-KNQAGDDK 248
HL ++ K S S N N I A ESKLWDP KN + +K
Sbjct: 141 HLTMIL-KILPQISVSQN----------NINTIAA--------ESKLWDPPPKNMSCMEK 181
Query: 249 SSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI----EDNV 304
S + LLK +YER+V+LEQ E I V+N + L + ++ +
Sbjct: 182 SEPS-------LEWQQLLKNLYERIVILEQQNRELSITVSNQKTQLTTLQTSLRFNQEEM 234
Query: 305 VLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISREDAQYLS 363
L+ CNGVY W++++F KL+ M + + FYS FY+S GY+ C R+N+S +D+++LS
Sbjct: 235 FLRSCNGVYIWRLHSFHEKLESMMNDSLKMFYSPGFYTSPNGYKICARINVSSKDSEFLS 294
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKK 422
L +H+++ ENDD LDWPF G + F ++ +SE I + S + ++F++P+ LNK+
Sbjct: 295 LLLHIMKSENDDGLDWPFNGTMYFVLVHPLNSERDIREITSSRPDLEAFRKPI-CELNKR 353
Query: 423 AFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+FG+ F+R+ D+LD +++D + +V
Sbjct: 354 SFGYTEFVRIRDLLD-----FLQNDCLTFRIEV 381
>gi|357611198|gb|EHJ67361.1| hypothetical protein KGM_19213 [Danaus plexippus]
Length = 416
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 229/449 (51%), Gaps = 77/449 (17%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLT-KDDIFIDNYTR 74
R+EC +CL +L+D ++T+CGHKFC +CI SW+ G +CPID L+ K DIF DNYT+
Sbjct: 33 RYECPVCLNWLRDPVITTCGHKFCKSCITSWLQNSG--HCPIDNINLSMKVDIFPDNYTK 90
Query: 75 REILENNLTCPY--KQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
REI E ++CP+ K C+ +++ + +SH+ +C +++QP
Sbjct: 91 REIQEQRMSCPFATKGCAVKVTPLDLDSHIASC--EFNQPEAS----------------- 131
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLE 192
PC F +GC+E F++Q + H H+
Sbjct: 132 ---------------------SQPQVQVPCTFSALGCKETFETQEDMNDHLHSDVQTHMS 170
Query: 193 LLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEG 252
LL N Y Q N S+ D KE EA L LW+P+K+ A
Sbjct: 171 LLMNAY--SKLQIDNDISNASMDA---KEQEAML---------LWEPSKDGAAS------ 210
Query: 253 DCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNF--ELNLKQTEEIEDN--VVLKL 308
+ + S L++ +YER+V+LEQ E I + N +++ +++ N ++L+
Sbjct: 211 --TSPPVNNTSALIRALYERVVVLEQRNRELDIVIANISKQMSAFAVAKMKQNNDLILRY 268
Query: 309 CNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIH 367
C G Y WK+ NF A+L+ M++ + + YS FY+S GYRFC R+NIS ++ Q +L +H
Sbjct: 269 CMGNYIWKIDNFKARLEAMQKDHFKMLYSPGFYTSPNGYRFCVRLNISPQNPQCFALHVH 328
Query: 368 LVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGF 426
L++ E DD L+WPF GRI F +N + E + D + S+ +F++P + + + FG+
Sbjct: 329 LMKTEYDDCLEWPFNGRISFAMINQYNPELTQRDTMMSNSTLIAFRKP-STEICVRGFGY 387
Query: 427 NNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ V DV R ++DDT +++ +
Sbjct: 388 TEYAVVNDV---ARNGFVKDDTLIVRVHI 413
>gi|350418145|ref|XP_003491757.1| PREDICTED: TNF receptor-associated factor 6-A-like [Bombus
impatiens]
Length = 414
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 227/452 (50%), Gaps = 84/452 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDN 71
L+PRFEC ICL +L+D +LTSCGHKFC+ CI +W+ +G CP+D K L +++D+F D
Sbjct: 28 LEPRFECPICLTWLRDPVLTSCGHKFCSQCIYTWLQKEGA-CCPVDSKSLKSENDLFRDL 86
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
YT REI + + C Y+Q C ++S + E+H+N C K S + DS T
Sbjct: 87 YTSREISQQRIPCLYQQFGCEIKMSPMDIEAHINGCSYKRS------LADSQTVY----- 135
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
C F VGC + F ++ L H + +
Sbjct: 136 --------------------------------CSFKNVGCMKTFHTEEDLHAHLEGNINI 163
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
HL ++ N Q + + N ESKLWDP +
Sbjct: 164 HLIMILN-------------------ILTQLSVSKNNVDNIAAESKLWDPPPKNTTSIEK 204
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI----EDNVV 305
+E + HLLK +YER+V+LEQ E I ++N++ L + ++ +
Sbjct: 205 NEPPLEWQ------HLLKNLYERIVVLEQENKELSISISNYKTQLTTLQTSLRFSQEEMS 258
Query: 306 LKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISREDAQYLSL 364
L+ CNGVY W+++ F KL+ M + + FYS FY+S GY+ C R+NIS +D + LSL
Sbjct: 259 LRSCNGVYIWRLHCFHEKLETMMNDSLKMFYSPGFYTSPNGYKICARINISSKDPESLSL 318
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK-NFDSFKRPVNFFLNKKA 423
+H+++ ENDD LDWPF G + F ++ + EI S + + ++F++P+ LNK++
Sbjct: 319 LLHIMKSENDDGLDWPFNGTMYFVLVHPDNREKDIREITSSRPDLEAFRKPI-CELNKRS 377
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FG+ F+R+ D+ D +E+D + + +V
Sbjct: 378 FGYTEFVRIRDLSD-----FLENDCLIFRIEV 404
>gi|340712675|ref|XP_003394881.1| PREDICTED: TNF receptor-associated factor 6-like [Bombus
terrestris]
Length = 413
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 230/452 (50%), Gaps = 85/452 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDN 71
L+PRFEC ICL +L+D +LTSCGHKFC+ CI +W+ +G CP+D K L +++D+F D
Sbjct: 28 LEPRFECPICLTWLRDPVLTSCGHKFCSQCIYTWLQKEGA-CCPVDSKSLKSENDLFRDL 86
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
YT REI + + C Y+Q C ++S + E+H+N C K ++ DS T
Sbjct: 87 YTSREISQQRIPCLYQQFGCEIKMSPMDMETHINGCSYK------RNLADSRTVY----- 135
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
C F VGC + F ++ L H + +
Sbjct: 136 --------------------------------CSFKNVGCMKTFHTEEDLHAHLEGNINI 163
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
HL ++ N + S S N N I A ESKLWDP +K+
Sbjct: 164 HLIMILN-ILTQLSVSKN----------NVNAIAA--------ESKLWDPPPKNTSIEKN 204
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI----EDNVV 305
D +LLK +YER+V+LEQ E I ++N++ L + ++ +
Sbjct: 205 EPP-------LDWQYLLKNLYERIVVLEQENKELSITISNYKTQLTTLQTSLRFSQEEIS 257
Query: 306 LKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISREDAQYLSL 364
L+ CNGVY W+++ F KL+ M + + FYS FY+S GY+ C R+NIS +D + LSL
Sbjct: 258 LRSCNGVYIWRLHCFHEKLETMMNDSLKMFYSPGFYTSPNGYKICARINISSKDPESLSL 317
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK-NFDSFKRPVNFFLNKKA 423
+H+++ ENDD LDWPF G + F ++ + EI S + + ++F++P+ LNK++
Sbjct: 318 LLHIMKSENDDGLDWPFNGTMYFVLVHPDNREKDIREITSSRPDLEAFRKPI-CELNKRS 376
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FG+ F+R+ D+ D +E+D + + +V
Sbjct: 377 FGYTEFVRIRDLPD-----FLENDCLIFRIEV 403
>gi|91080239|ref|XP_972955.1| PREDICTED: similar to AGAP003004-PA [Tribolium castaneum]
gi|270006403|gb|EFA02851.1| TNF-receptor-associated factor 2 [Tribolium castaneum]
Length = 398
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 215/446 (48%), Gaps = 81/446 (18%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDNYTR 74
RFEC ICL +L+D +LTSCGH+FC +C+DSW++ + + CPID L K DIF DN+TR
Sbjct: 25 RFECPICLAWLRDPVLTSCGHRFCRSCMDSWLERENPS-CPIDNTKLEKGVDIFPDNFTR 83
Query: 75 REILENNLTCP--YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
REI + CP + C +LS + E+H+ TC +Y P +
Sbjct: 84 REISQQKTKCPNLVRGCLEELSPLDVETHLLTC--QYKPPEL------------------ 123
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLE 192
PE NE C F + GC + F+ + L++H + HL
Sbjct: 124 --------------PE--------NEKLRCAFVEFGCEDKFEDEPELQRHLEQYIHKHLN 161
Query: 193 LLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEG 252
LL Y S +T + +Q + WDP S+
Sbjct: 162 LLSQAYSKFTINSPSTSAIAQQ-------------------ANFWDP---------PSKN 193
Query: 253 DCSCKTCGDNSH-LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNG 311
D S + DN + LLK +YE+ VLLEQ EQ I + N + + L+ CNG
Sbjct: 194 DTSVSSNHDNVNGLLKALYEKAVLLEQKTREQDIIIANMSEQISSLNLSMSKMHLRYCNG 253
Query: 312 VYFWKMYNFPAKLKEMKEINRYF-YSACFYSSCFGYRFCTRVNISREDAQYLSLFIHLVQ 370
Y W +F K+ M+ +R YS FY++ GYR C R+N+S +D Y+++ IH+++
Sbjct: 254 CYLWYFNDFKNKINAMRNDSRIMHYSPGFYTAANGYRLCIRLNLSPKDPNYIAILIHVMK 313
Query: 371 GENDDILDWPFVGRIRFTALNTSSEF-SITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNF 429
E+D+ LDWPF GR+ T ++ F +I + + + D+FK+PV +N K FG+ F
Sbjct: 314 TEHDNALDWPFSGRLTITLVHPLQPFHNIKETMMTRPELDAFKKPVQ-DMNPKGFGYTEF 372
Query: 430 IRVADVLDPGRGFLMEDDTFVIKTQV 455
+ ++ G +E++ +IK Q
Sbjct: 373 ALIEELFSQG---YVENNHLLIKVQA 395
>gi|242007226|ref|XP_002424443.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507843|gb|EEB11705.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 411
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 232/460 (50%), Gaps = 75/460 (16%)
Query: 1 MEHQPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK 60
M+ + ++ L LD +FEC ICL LK+ +LTSCGH+FC++C++ W++ KG++ CP+D
Sbjct: 1 MQDSNLQSDMLGLDRQFECPICLSCLKEPVLTSCGHRFCSSCLNLWLESKGES-CPVDGG 59
Query: 61 VLTKD-DIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD 119
+L K D+F D++TRREIL C K C ++ + E + HV++ + S+ S + D
Sbjct: 60 ILNKKLDLFPDHFTRREILNRTTIC--KLCKLEIGLSEMDEHVSSHHHHSSRASKKVSED 117
Query: 120 SPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALL 179
N +G C F GC +V ++ L
Sbjct: 118 -------------------------------NGKGC------CPFGTFGC-DVDVTENTL 139
Query: 180 EKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDP 239
+ H + + HL L+ N + + + D Q ES +W+P
Sbjct: 140 KDHLEKDLNLHLNLVANSHLNLREKLLKNTDKMSDDVLAQ-------------ESLMWEP 186
Query: 240 NKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEE 299
+ G D+ N+ L++ +YER+V+LEQ EQ ++ + L+++ +
Sbjct: 187 Q--EKGKDRQ------------NASLMRALYERVVVLEQRCHEQNAQMEKLKGRLEESND 232
Query: 300 IEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED 358
V L+ G Y W++ +F K+ MK + R F+S FY+S GY+ C R+N+S D
Sbjct: 233 RIREVSLRHACGQYLWRIDDFGKKIGSMKSGDKRVFFSEGFYTSPNGYKICGRINLSPVD 292
Query: 359 AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNF 417
+ LSL IH++Q +D L WPF GRI+F ++ T S+ +I + I S + DSFK+P
Sbjct: 293 SDMLSLLIHIMQTPHDHTLVWPFTGRIQFAIVHPTDSKLTIAETIMSRPDLDSFKKPAR- 351
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTE 457
+N KAFG+ FI + + + G+L+ DD+ ++K V E
Sbjct: 352 DINTKAFGYPQFISINKIFN--NGYLI-DDSLIVKLHVQE 388
>gi|312372715|gb|EFR20613.1| hypothetical protein AND_19795 [Anopheles darlingi]
Length = 381
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 205/448 (45%), Gaps = 101/448 (22%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDN 71
L+ R+EC IC +L + ILT CGH+FC CI W++ K N CP+D + L K DIF DN
Sbjct: 27 LEARYECPICYCWLNEPILTKCGHRFCRKCITDWLNEKNSN-CPLDNEPLDIKCDIFPDN 85
Query: 72 YTRREILENNLTCP--YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
TRREI + CP + C+ QLS E +SH C
Sbjct: 86 CTRREISQIKKPCPNWMRGCADQLSPTEIDSHQLQCPF---------------------- 123
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
G S+++ PC F +V C+ V + +A L +H
Sbjct: 124 ------------------------GMSSQSQPCPFARVKCKFVARDEATLNEHIATDCQK 159
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
HL+LL + Y G E Y + WDP + + + S
Sbjct: 160 HLQLLLDSYTGSG--------------------ERY---------RFWDPPEKNSAPEMS 190
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC 309
+ + L++ +YER+V+LEQ + IK++ + L + + V +
Sbjct: 191 T------------NELVRSMYERIVILEQELHILSIKLSKQDTQLAK---VHHEVDPRYS 235
Query: 310 NGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHL 368
GV WK+ +F +K+ M+ N FYS Y+S GY+FC R+N+ +++ L +HL
Sbjct: 236 AGVLLWKLDDFSSKVDTMQANSNCMFYSGEAYTSPHGYKFCARINVPSRTKEFIGLHVHL 295
Query: 369 VQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
+Q END L+WPF GRI+ T LN + E S D I S +F RP N ++ + FGF
Sbjct: 296 MQSENDYHLEWPFKGRIKITLLNVRNPERSQHDTIMSKPEILAFHRP-NQEISPRGFGFL 354
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F ++ +VL M+++ VIK ++
Sbjct: 355 EFAKIKEVL----AKFMDNNMVVIKIEM 378
>gi|290463015|gb|ADD24555.1| TNF receptor-associated factor 6 [Lepeophtheirus salmonis]
Length = 453
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 224/459 (48%), Gaps = 49/459 (10%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L RFEC ICL +D TSCGH+FC +CI +W++ +G+ CP D L + DIF D+
Sbjct: 30 LPKRFECPICLLCQRDPHQTSCGHRFCYSCIITWLN-EGRT-CPDDNCSLGEGDIFPDSM 87
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSG 130
REIL+ +TCP K C + + + + E+H+ +C + S + + SS NT
Sbjct: 88 AHREILQLMITCPQKDHGCGAIIHLSDVENHLRSCKYITQERSSKKHENPSRSSDSNTCP 147
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNE------NFPCKFYQVGCR-EVFKSQALLEKHY 183
N V +H QG N C F GC ++ + + L+ H
Sbjct: 148 SCGN----------VLDDHEITQGQGNRLVCPYAIVACPFTSAGCAIKIMRRE--LQDHI 195
Query: 184 DLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQ 243
+TS H+ LL++K Q+ +TPS Q + ++ ++ +S L N
Sbjct: 196 KSQTSHHVSLLWDKL-RKIQQNYDTPSLTTQSSVDETASSSFKEGILSRDSDLRLSGSNL 254
Query: 244 AGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDN 303
K L+K ++ R+V LEQ + +I+ + LK+ E
Sbjct: 255 HSTQK----------------LIKDLFRRVVSLEQKNCQLEIRNEMLQEKLKKVMCSEFE 298
Query: 304 VVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA-QY 361
+ CNG + WK+ +FP K+M+ + + YS FY+S FGY+ C R NI+ + +Y
Sbjct: 299 AQGRYCNGKFVWKLLDFPELHKKMRTDCHFVVYSKGFYTSVFGYKVCLRSNINLVNGEEY 358
Query: 362 LSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE--FSITDEIQSDKNFDSFKRPVNFFL 419
L +F+HL++G+ND L WPF G+I TA+ SE F EI +F+RP++
Sbjct: 359 LGVFVHLMRGDNDSALSWPFRGQISLTAVREISENFFETIKEIPEGSK--AFERPIS-ER 415
Query: 420 NKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEM 458
N FGF FIRV + L G GF+ ++T ++K ++ M
Sbjct: 416 NPTGFGFTEFIRV-NALYSG-GFINTENTLILKAELFTM 452
>gi|379698888|ref|NP_001243915.1| TRAF6 [Bombyx mori]
gi|304421474|gb|ADM32536.1| TRAF6 [Bombyx mori]
Length = 359
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 201/412 (48%), Gaps = 76/412 (18%)
Query: 54 YCPIDEKVLT-KDDIFIDNYTRREILENNLTCPY--KQCSSQLSIPEYESHVNTCYLKYS 110
+CPID L+ K DIF DNYT+REI E + CP+ K C+ +++ + ++H+ C +Y+
Sbjct: 11 HCPIDNINLSMKVDIFPDNYTKREIQEQRMNCPFSAKGCTVKVTPLDLDAHIAVC--EYN 68
Query: 111 QPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCR 170
QP TS P + PC F GC+
Sbjct: 69 QPE--------------TSSQPE------------------------IHIPCSFKPAGCK 90
Query: 171 EVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNK 230
E F SQ + +H + T H+ LL N Y + N S+ DT Q+ +
Sbjct: 91 ETFDSQDEMNQHLNNDTQSHMNLLMNAYSE--MKINNDMSNANMDTKEQEAM-------- 140
Query: 231 EHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNN 289
LWD P+K+ G+ SS + S L++ +YER+V+LEQ EQ I + N
Sbjct: 141 ----ALWDAPDKD--GNQTSS------PPLNNTSALIRALYERVVVLEQRNREQDIVIAN 188
Query: 290 F--ELNLKQTEEIEDN--VVLKLCNGVYFWKMYNFPAKLKEM-KEINRYFYSACFYSSCF 344
+L+ +++ N ++L+ C G Y W++ NF +L M K+ + YS FY+S
Sbjct: 189 ISKQLSAFAVAKMKQNNEMLLRYCMGNYVWRIDNFKTRLDAMLKDHYKMLYSPGFYTSPN 248
Query: 345 GYRFCTRVNISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQ 403
GYRFC R+NIS ++ + +L +HL++ ENDD L+WPF GRI F +N E S D +
Sbjct: 249 GYRFCVRLNISPQNTHFFALHVHLMKTENDDCLEWPFNGRISFVLVNQVYPELSQRDTMM 308
Query: 404 SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
S+ N +F +P + FG+ + + DV+ R ++DD +I+ +
Sbjct: 309 SNTNLKAFSKPATEIC-VRGFGYTEYAVLGDVI---RNGFVKDDVLIIRVNI 356
>gi|347969045|ref|XP_311879.5| AGAP003004-PA [Anopheles gambiae str. PEST]
gi|333467723|gb|EAA07925.6| AGAP003004-PA [Anopheles gambiae str. PEST]
Length = 400
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 197/448 (43%), Gaps = 104/448 (23%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDN 71
L+ R+EC IC +L + ILT CGH+FC CI W++ K N CP+D + L K DIF DN
Sbjct: 49 LEARYECPICYCWLNEPILTKCGHRFCRKCITDWLNEKNSN-CPLDNEPLDIKCDIFPDN 107
Query: 72 YTRREILENNLTCP--YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
TRREI + CP + C QLS + ++H+ C S+
Sbjct: 108 CTRREISQIKKPCPNSMRGCGEQLSPTDIDTHLRQCPFAMSR------------------ 149
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
++ PC F +V C+ V +A + H
Sbjct: 150 ----------------------------QSQPCPFARVKCKFVAPDEAAMSAHIASDCQQ 181
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
HL++ + S + WDP + + S
Sbjct: 182 HLQVARSPCVSALT--------------------------------FWDPPAKNSVPEMS 209
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC 309
+ + L++ +YER+V+LEQ + IK++ E+ L + + V +
Sbjct: 210 T------------NELVRSMYERIVILEQEVHILGIKLSKQEIQLTK---LNQEVDPRYS 254
Query: 310 NGVYFWKMYNFPAKLKEM-KEINRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHL 368
GV WK+ +F K++ M N FYS+ Y+S GY+FC R+N+S + L +HL
Sbjct: 255 GGVLLWKLDDFSNKIESMVANSNCMFYSSEAYTSPHGYKFCARINVSPRTKDSIGLHVHL 314
Query: 369 VQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
+Q END L+WPF GRI+ T LN S E S D I S +F RP N ++ + FGF
Sbjct: 315 MQSENDYHLEWPFKGRIKITLLNVRSPELSQHDTIMSKPEILAFHRP-NQDISPRGFGFL 373
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F ++ D+L +++T VIK Q+
Sbjct: 374 EFAKIKDIL----AKFADNNTVVIKIQM 397
>gi|195480197|ref|XP_002101177.1| GE17475 [Drosophila yakuba]
gi|194188701|gb|EDX02285.1| GE17475 [Drosophila yakuba]
Length = 475
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 202/450 (44%), Gaps = 83/450 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDN 71
LD R+EC+IC+++L + +LTSCGH+FC +C+ +W+ K CP+D K L+ + DIF DN
Sbjct: 99 LDSRYECAICIDWLNEPVLTSCGHRFCRSCLTAWMQ-KNNQCCPMDNKRLSAEHDIFPDN 157
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNT 128
YTRREI + CP CS S E H+ +C Y + +P E
Sbjct: 158 YTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEK------------ 205
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKT 187
C F ++ C V + + LE+H
Sbjct: 206 ---------------------------------CPFAKIKCDFVGRPETNQLEEHLKADM 232
Query: 188 SFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
H++L+ + Q+ + +++ +E H +L P + G D
Sbjct: 233 PHHMQLMLQAF----QQTAIATWQPHKPSTSGSAVE------NGHGQQLPPPPQYANGVD 282
Query: 248 KSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
+ +++ +Y+R+V+LEQ EQ+ ++ N + L+ + + V +
Sbjct: 283 EQ---------------IVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQ-QAPVDPR 326
Query: 308 LCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFI 366
NG W++ A + ++ N YS Y+S GY+FC R+NI LSL +
Sbjct: 327 YSNGTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKPHVLSLHV 386
Query: 367 HLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
HL+Q END LDWPF GRI+ ++ + + S D I + +F +P ++ + FG
Sbjct: 387 HLMQSENDYHLDWPFKGRIKLCMVHPADATLSQHDTIMTKPEILAFHKPRE-AISTRGFG 445
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F + +++++ G DD +IK ++
Sbjct: 446 FLEYANISNIIQLG---FCADDQLLIKIEI 472
>gi|194893612|ref|XP_001977907.1| GG17981 [Drosophila erecta]
gi|190649556|gb|EDV46834.1| GG17981 [Drosophila erecta]
Length = 475
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 197/457 (43%), Gaps = 96/457 (21%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDN 71
LD R+EC+IC+++L + +LTSCGH+FC +C+ +W+ K CP+D K L+ + DIF DN
Sbjct: 98 LDSRYECAICIDWLNEPVLTSCGHRFCRSCLTTWMQ-KNNQCCPMDNKRLSAEHDIFPDN 156
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNT 128
YTRREI + CP CS S E H+ +C Y + +P E
Sbjct: 157 YTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEK------------ 204
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKT 187
C F ++ C V + + LE+H
Sbjct: 205 ---------------------------------CPFAKIKCDFVGRPETNQLEEHLKADM 231
Query: 188 SFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
H++L+ + Q T + W P+K
Sbjct: 232 PHHMQLMLQAF-----QQTAIAT--------------------------WQPHKPSTSGS 260
Query: 248 KSSEGDCSCKTC-------GDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI 300
G + G + +++ +Y+R+V+LEQ EQ+ ++ N + L+ +
Sbjct: 261 AMENGHGQQQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENLQKQLRLARQ- 319
Query: 301 EDNVVLKLCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDA 359
+ V + NG W++ A + ++ N YS Y+S GY+FC R+NI
Sbjct: 320 QAPVDPRYSNGTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKP 379
Query: 360 QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFF 418
LSL +HL+Q END LDWPF GRI+ ++ + + S D I + +F +P
Sbjct: 380 HVLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPADATLSQHDTIMTKPEILAFHKPRE-A 438
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
++ + FGF + +++++ G DD +IK ++
Sbjct: 439 ISTRGFGFLEYANISNIIQLG---FCADDRLLIKIEI 472
>gi|5714383|gb|AAD47895.1|AF079838_1 TRAF6 [Drosophila melanogaster]
Length = 475
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 197/457 (43%), Gaps = 96/457 (21%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDN 71
LD R+EC+IC+++L + +LTSCGH+FC +C+ +W+ K CP+D K L+ + DIF DN
Sbjct: 98 LDSRYECAICIDWLNEPVLTSCGHRFCRSCLTAWMQ-KNNQCCPMDNKRLSAEHDIFPDN 156
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNT 128
YTRREI + CP CS S E H+ +C Y + +P E
Sbjct: 157 YTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEK------------ 204
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKT 187
C F ++ C V + + LE+H
Sbjct: 205 ---------------------------------CPFAKIKCDFVGRPETNQLEEHLKADM 231
Query: 188 SFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
H++L+ + Q T + W P+K
Sbjct: 232 PHHMQLMLQAF-----QQTAIAT--------------------------WQPHKPSTSGA 260
Query: 248 KSSEGDCSCK-------TCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI 300
G + G + +++ +Y+R+V+LEQ EQ+ ++ N + L+ +
Sbjct: 261 AVENGHGQQQLPPPPPYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQ- 319
Query: 301 EDNVVLKLCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDA 359
+ V + NG W++ A + ++ N YS Y+S GY+FC R+NI
Sbjct: 320 QAPVDSRYSNGTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKP 379
Query: 360 QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFF 418
LSL +HL+Q END LDWPF GRI+ ++ + + S D I + +F +P
Sbjct: 380 HVLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPADATLSQHDTIMTKPEILAFHKPRE-A 438
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
++ + FGF + +++++ G DD +IK ++
Sbjct: 439 ISTRGFGFLEYANISNIIQLG---FCADDRLLIKIEI 472
>gi|125981537|ref|XP_001354772.1| GA10670 [Drosophila pseudoobscura pseudoobscura]
gi|54643083|gb|EAL31827.1| GA10670 [Drosophila pseudoobscura pseudoobscura]
Length = 464
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 200/449 (44%), Gaps = 78/449 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDN 71
LD R+EC+IC+++L + +LTSCGH+FC C+ W+ + CP+D K L+ + DIF DN
Sbjct: 85 LDSRYECAICIDWLNEPVLTSCGHRFCKRCLTDWLQNHNQ-CCPLDNKQLSAEQDIFPDN 143
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
YTRREI + CP C+ S E H+ +C + QP E + +
Sbjct: 144 YTRREIEQLKHKCPNSPLGCALVASPIEVHRHLPSCPYR-RQPQPEQLEEK--------- 193
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKTS 188
C F ++ C V + + LE+H
Sbjct: 194 --------------------------------CPFAKIKCDFVGRPETNQLEEHLKSDMP 221
Query: 189 FHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDK 248
H++L+ + + +T P TS ++N +L P + G D+
Sbjct: 222 HHMQLMLQAF-QQTAIATWQPQKASTSTSGGS------LENGHGHGQLAPPPQYANGVDE 274
Query: 249 SSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKL 308
+++ +Y+R+V+LEQ EQ+ ++ N L+ + D +
Sbjct: 275 Q---------------IVQTMYQRIVVLEQRTREQETRIENLNKQLRLARQPIDP---RY 316
Query: 309 CNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIH 367
NG W + + + ++ N YS Y+S +GY+FC R+NI LSL +H
Sbjct: 317 SNGTIVWNIGHLGNLVSRLRANANNQVYSHECYTSPYGYKFCARLNIQPRKPHVLSLHVH 376
Query: 368 LVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGF 426
L+Q END LDWPF GRI+ ++ T + S D I + +F +P ++ + FGF
Sbjct: 377 LMQSENDFHLDWPFKGRIKLCMVHPTDASQSQHDTIMTKPEILAFHQPRE-AISTRGFGF 435
Query: 427 NNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ +++++ G + DD +IK ++
Sbjct: 436 LEYANISNIMHLG---FVADDRLLIKIEI 461
>gi|24640527|ref|NP_511080.2| TNF-receptor-associated factor 6 [Drosophila melanogaster]
gi|7290897|gb|AAF46338.1| TNF-receptor-associated factor 6 [Drosophila melanogaster]
gi|15010370|gb|AAK77233.1| GH01161p [Drosophila melanogaster]
gi|220944882|gb|ACL84984.1| Traf6-PA [synthetic construct]
gi|220954780|gb|ACL89933.1| Traf6-PA [synthetic construct]
Length = 475
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 197/457 (43%), Gaps = 96/457 (21%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDN 71
LD R+EC+IC+++L + +LTSCGH+FC +C+ +W+ K CP+D K L+ + DIF DN
Sbjct: 98 LDSRYECAICIDWLNEPVLTSCGHRFCRSCLTAWMQ-KNNQCCPMDNKRLSAEHDIFPDN 156
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNT 128
YTRREI + CP CS S E H+ +C Y + +P E
Sbjct: 157 YTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEK------------ 204
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKT 187
C F ++ C V + + LE+H
Sbjct: 205 ---------------------------------CPFAKIKCDFVGRPETNQLEEHLKADM 231
Query: 188 SFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
H++L+ + Q T + W P+K
Sbjct: 232 PHHMQLMLQAF-----QQTAIAT--------------------------WQPHKPSTSGA 260
Query: 248 KSSEGDCSCKTC-------GDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI 300
G + G + +++ +Y+R+V+LEQ EQ+ ++ N + L+ +
Sbjct: 261 AVENGHGQQQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQ- 319
Query: 301 EDNVVLKLCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDA 359
+ V + NG W++ A + ++ N YS Y+S GY+FC R+NI
Sbjct: 320 QAPVDPRYSNGTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKP 379
Query: 360 QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFF 418
LSL +HL+Q END LDWPF GRI+ ++ + + S D I + +F +P
Sbjct: 380 HVLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPADATLSQHDTIMTKPEILAFHKPRE-A 438
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
++ + FGF + +++++ G DD +IK ++
Sbjct: 439 ISTRGFGFLEYANISNIIQLG---FCADDRLLIKIEI 472
>gi|195432080|ref|XP_002064054.1| GK19915 [Drosophila willistoni]
gi|194160139|gb|EDW75040.1| GK19915 [Drosophila willistoni]
Length = 468
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 203/450 (45%), Gaps = 81/450 (18%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDNY 72
D R+EC+IC+++L + +LTSCGH+FC +C++ W+ + CP+D K L+ D DIF DN+
Sbjct: 89 DSRYECAICIDWLNEPVLTSCGHRFCKSCLNDWLQNHNQ-CCPLDNKHLSTDQDIFPDNF 147
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSG 130
TRREI + CP CS S E H+ TC
Sbjct: 148 TRREIEQLKHKCPNSPMGCSLIASPIELNRHLPTC------------------------- 182
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKTSF 189
P ++ S+ H +++ + C F + C V + + LE+H L
Sbjct: 183 -PYRRQQSEH-------HHQDLEVDQQQREKCPFASIKCDFVGRPETNQLEEHLKLDVPH 234
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
H++L+ + Q T S W P+K+ + +
Sbjct: 235 HMQLILKAF-----QQTTLDS--------------------------WQPHKSNSSTSPN 263
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNF--ELNLKQTEEIEDNVVLK 307
+ G + +++ +Y+R+V+LEQ E + +V N EL L + + I+ +
Sbjct: 264 PPPPPAQYANGVDEQIVQAMYQRIVILEQRAREYETRVENLNKELRLCRQQPID----AR 319
Query: 308 LCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFI 366
NG W++ + ++ N YS Y+S +GY+FC R+NI LSL +
Sbjct: 320 YSNGTIIWQIEQLTPLITRLRANANNQVYSHECYTSPYGYKFCARLNIQPRKPHVLSLHV 379
Query: 367 HLVQGENDDILDWPFVGRIRFTALNTSSE-FSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
HL+Q END LDWPF GRI+ ++ + + S D I + +F +P ++ + FG
Sbjct: 380 HLMQSENDFHLDWPFKGRIKLCMVHPADKSLSQHDTIMTKPEILAFHQPRE-AISTRGFG 438
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F + +++++ G DD +IK ++
Sbjct: 439 FLEYANISNIMHLG---FCADDRLLIKIEI 465
>gi|4959430|gb|AAD34345.1|AF119793_1 TNF-receptor-associated factor 2 [Drosophila melanogaster]
Length = 463
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 198/458 (43%), Gaps = 98/458 (21%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC-PIDEKVLTKD-DIFID 70
LD R+EC+IC+++L + +LTSCGH+FC +C+ +W+ + N C P+D K L+ + DIF D
Sbjct: 86 LDSRYECAICIDWLNEPVLTSCGHRFCRSCLTAWM--QKNNQCWPMDNKRLSAEHDIFPD 143
Query: 71 NYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRN 127
NYTRREI + CP CS S E H+ +C Y + +P E
Sbjct: 144 NYTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEK----------- 192
Query: 128 TSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLK 186
C F ++ C V + + LE+H
Sbjct: 193 ----------------------------------CPFAKIKCDFVGRPETNQLEEHLKAD 218
Query: 187 TSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGD 246
H++L+ + Q T + W P+K
Sbjct: 219 MPHHMQLMLQAF-----QQTAIAT--------------------------WQPHKPSTSG 247
Query: 247 DKSSEGDCSCK-------TCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEE 299
G + G + +++ +Y+R+V+LEQ EQ+ ++ N + L+ +
Sbjct: 248 AAVENGHGQQQLPPPPPYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQ 307
Query: 300 IEDNVVLKLCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISRED 358
+ V + NG W++ A + ++ N YS Y+S GY+FC R+ SR
Sbjct: 308 -QAPVDPRYSNGTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLTFSRGK 366
Query: 359 AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNF 417
LSL +HL+Q END LDWPF GRI+ ++ + + S D I + +F +P
Sbjct: 367 PHVLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPADATLSQHDTIMTKPEILAFHKPRE- 425
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
++ + FGF + +++++ G DD +IK ++
Sbjct: 426 AISTRGFGFLEYANISNIIQLG---FCADDRLLIKIEI 460
>gi|195393728|ref|XP_002055505.1| GJ18758 [Drosophila virilis]
gi|194150015|gb|EDW65706.1| GJ18758 [Drosophila virilis]
Length = 480
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 199/446 (44%), Gaps = 79/446 (17%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDNY 72
D R+EC+IC+++L + +LTSCGH+FC +C+ W++ + CP+D K L T+ DIF DNY
Sbjct: 107 DSRYECAICIDWLNEPVLTSCGHRFCKSCLSDWLENHNQ-CCPLDNKQLSTEQDIFPDNY 165
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
TRREI + CP + P + SP R+ P
Sbjct: 166 TRREIEQIKHKCP------------------------NSPHGCAVVASPIELHRHLPSCP 201
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKTSFHL 191
+ C F + C V + + LE+H H+
Sbjct: 202 ----------------YRRQLQQQQLEEKCPFASIKCDFVGRPETNQLEEHIKTDMPHHM 245
Query: 192 ELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSE 251
+L+ + + +T P + TS+ ++N +L P + G D+
Sbjct: 246 QLMLQAF-QQTAIATWQPH--KPSTSS--------LENGHKAGQLAPPPQYANGVDEQ-- 292
Query: 252 GDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNG 311
+++ +Y+R+V+LEQ EQ+ ++ N L++ + I+ + NG
Sbjct: 293 -------------IVQSMYQRIVVLEQRTREQETRIENLNKQLRRQQPID----ARYSNG 335
Query: 312 VYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHLVQ 370
W++ A ++ ++ N YS Y+S +GY+FC R+NI LSL +HL+Q
Sbjct: 336 TIVWRIEQLSALVERLRSNANNQVYSHECYTSPYGYKFCARLNIQPRKPHVLSLHVHLMQ 395
Query: 371 GENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNF 429
END LDWPF GRI+ ++ + S D I + +F +P ++ + FGF +
Sbjct: 396 SENDFHLDWPFKGRIKLCMVHPGDASLSQHDTIMTKPEILAFHQPRE-AISTRGFGFLEY 454
Query: 430 IRVADVLDPGRGFLMEDDTFVIKTQV 455
+++++ G D+ +IK ++
Sbjct: 455 ANISNIMQLG---FCADNRLLIKIEI 477
>gi|195134793|ref|XP_002011821.1| GI14410 [Drosophila mojavensis]
gi|193909075|gb|EDW07942.1| GI14410 [Drosophila mojavensis]
Length = 480
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/446 (25%), Positives = 198/446 (44%), Gaps = 79/446 (17%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDNY 72
D R+EC+IC+++L + +LTSCGH+FC +C+ W+ + CP+D K L+ + DIF DNY
Sbjct: 107 DSRYECAICIDWLNEPVLTSCGHRFCKSCLSDWLQNHNQ-CCPLDNKQLSAEQDIFPDNY 165
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
TRREI + CP + P + SP R+ P
Sbjct: 166 TRREIEQIKHKCP------------------------NSPHGCVVVASPIELHRHLPTCP 201
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKTSFHL 191
++ + L C F + C V + + LE+H H+
Sbjct: 202 YRRQQQQQLEEK-----------------CPFASIKCGFVGRPETNQLEEHLKTDMPHHM 244
Query: 192 ELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSE 251
+L+ + Q T + S+ +E N +L P + G D+
Sbjct: 245 QLMLQAF-----QQTAIETWQPHKPSSSSALE-----NGHKAGQLPPPPQYANGVDEQ-- 292
Query: 252 GDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNG 311
+++ +Y+R+V+LEQ EQ+ ++ N L++ + I+ + NG
Sbjct: 293 -------------IVQTMYQRIVVLEQRTREQETRIENLNKQLRRQQPID----ARYSNG 335
Query: 312 VYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHLVQ 370
W++ + ++ ++ N YS Y+S +GY+FC R+NI LSL +HL+Q
Sbjct: 336 TIVWQIEQLSSLIERLRANANNQVYSHECYTSPYGYKFCARLNIQPRKPHVLSLHVHLMQ 395
Query: 371 GENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNF 429
+ND LDWPF GRI+ ++ + S D I + +F +P ++ + FGF +
Sbjct: 396 SDNDFHLDWPFKGRIKLCMVHPGDASLSQHDTIMTKPEILAFHQPRE-AISTRGFGFLEY 454
Query: 430 IRVADVLDPGRGFLMEDDTFVIKTQV 455
+++++ G D+ +IK ++
Sbjct: 455 ANISNIMQLG---FCADNRLLIKIEI 477
>gi|157820501|ref|NP_001101224.1| TNF receptor-associated factor 6 [Rattus norvegicus]
gi|288559149|sp|B5DF45.1|TRAF6_RAT RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|149022731|gb|EDL79625.1| Tnf receptor-associated factor 6 (predicted) [Rattus norvegicus]
gi|197246608|gb|AAI68921.1| Tnf receptor-associated factor 6 [Rattus norvegicus]
Length = 530
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 207/489 (42%), Gaps = 89/489 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC------------YLKYSQPSVEDITDS 120
+REIL + CP K C ++ + E H C + + Q + I D
Sbjct: 123 AKREILSLTVKCPNKGCVQKMELRHLEDHQVHCEFALVICPQCQRFFQKCQINKHIIEDC 182
Query: 121 P---TSSFRNTSGIPTNKRN----------------SKILTVTVFPEHLNMQGSSNENFP 161
P S +P ++ IL P H ++ + P
Sbjct: 183 PRRQVSCVNCAVPMPYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAP-VP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELL----FNKYCSDGSQSTNTPSHGRQDTS 217
C F GC E + L +H T H+ LL N S ++PS G
Sbjct: 242 CTFSVFGCHEKMQRNHL-ARHLQENTQLHMRLLAQAVHNVNLSLRPCDASSPSRG----- 295
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE--RMVL 275
+ DPN + K EG +LV + ++
Sbjct: 296 ----------------CRPEDPNYEETV--KQLEG--------------RLVRQDHQIRE 323
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + V+ + ++ E+ + + CNG+Y WK+ NF LK +E
Sbjct: 324 LTAKMETQSMHVSELKRTIRSLEDKVAEMEAQQCNGIYIWKIGNFGMHLKSQEEERPVVI 383
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 384 HSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 443
Query: 391 NTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+ S + + + +F+RP N K FG+ F+ + + +G ++DD
Sbjct: 444 DQSEAVIRQNHEEVMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEAL---RQGTFIKDD 499
Query: 448 TFVIKTQVT 456
T +++ +V+
Sbjct: 500 TLLVRCEVS 508
>gi|195049005|ref|XP_001992634.1| GH24860 [Drosophila grimshawi]
gi|193893475|gb|EDV92341.1| GH24860 [Drosophila grimshawi]
Length = 480
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 198/448 (44%), Gaps = 80/448 (17%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDNY 72
D R+EC+IC+++L + ++TSCGH+FC +C+ W+ + CP+D K L+ + DIF DNY
Sbjct: 104 DSRYECAICIDWLNEPVVTSCGHRFCKSCLSDWLQNHNQ-CCPLDNKQLSAEKDIFPDNY 162
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSG 130
TRREI + CP C+ S E H+ +C + Q + + +
Sbjct: 163 TRREIEQIKHKCPNSPHGCAVIASPIELHKHLPSCPYRRQQQHQQPLEEK---------- 212
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKTSF 189
C F + C V + + LE+H
Sbjct: 213 -------------------------------CPFASIKCDFVGRPETNQLEEHLKTDMPH 241
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
HL+L+ + Q T + Q S + ++N +L P + D+
Sbjct: 242 HLQLMLQAH-----QQTAIATWQPQKLST----GSGTLENGHKTGQLPPPPQYANAVDEQ 292
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC 309
+++ +Y+R+V+LEQ EQ+ ++N + L++ + I+ +
Sbjct: 293 ---------------IVQTMYQRIVVLEQRTREQESHIDNMKEQLRRQQPID----ARYS 333
Query: 310 NGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHL 368
NG W + A + ++ N YS Y+S +GY+FC R+NI LSL +HL
Sbjct: 334 NGTIVWHIEELSALVDRLRANANNQAYSHECYTSPYGYKFCARLNIQPRKPHVLSLHVHL 393
Query: 369 VQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
+Q END LDWPF GRI+ ++ + S D I + +F +P ++ + FGF
Sbjct: 394 MQSENDFHLDWPFKGRIKLCMVHPGDASLSQHDTIMTKPEILAFHQPRE-AISTRGFGFL 452
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ +++++ G D+ +IK ++
Sbjct: 453 EYANISNIMQLG---FCADNRLLIKIEI 477
>gi|354470461|ref|XP_003497507.1| PREDICTED: TNF receptor-associated factor 6-like [Cricetulus
griseus]
Length = 530
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 208/489 (42%), Gaps = 89/489 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYL------KYSQP---------SVEDI 117
+REIL + CP K C ++ + E H C + +P +ED
Sbjct: 123 AKREILSLTVKCPNKGCLQKMELRHLEDHQAHCEFALMNCPQCQRPFQKCHFHIHIIEDC 182
Query: 118 TDSPTSSFRNTSGIPTNKRN----------------SKILTVTVFPEHLNMQGSSNENFP 161
S +P ++ +L P H ++ + P
Sbjct: 183 PRRQVSCVNCAVSMPFEEKEIHDQTCPLANIICEYCGTVLIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY----CSDGSQSTNTPSHG--RQD 215
C F GC E + L +H T H+ LL + S T++PS G +D
Sbjct: 242 CTFSVFGCHEKMQRNHL-ARHLQENTQLHMRLLAQAVHDVNLTLRSCDTSSPSRGCCPED 300
Query: 216 TSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVL 275
+ ++ I K+ ES+L D + E
Sbjct: 301 PNYEETI-------KQLESRLVR------QDHQIRE------------------------ 323
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q I V+ + ++ E+ + + CNG+Y WK+ NF LK +E
Sbjct: 324 LTAKMETQSIHVSELKRTIRTLEDKVAEMEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVI 383
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 384 HSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 443
Query: 391 NTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+ S + + + +F+RP N K FG+ F+ + + +G ++DD
Sbjct: 444 DQSEAVIRQNHEEVMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEAL---RQGTFVKDD 499
Query: 448 TFVIKTQVT 456
T +++ +V+
Sbjct: 500 TLLVRCEVS 508
>gi|344238120|gb|EGV94223.1| TNF receptor-associated factor 6 [Cricetulus griseus]
Length = 508
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 207/489 (42%), Gaps = 89/489 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 42 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 100
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP---------SVEDI 117
+REIL + CP K C ++ + E H C +P +ED
Sbjct: 101 AKREILSLTVKCPNKGCLQKMELRHLEDHQAHCEFALMNCPQCQRPFQKCHFHIHIIEDC 160
Query: 118 TDSPTSSFRNTSGIPTNKRN----------------SKILTVTVFPEHLNMQGSSNENFP 161
S +P ++ +L P H ++ + P
Sbjct: 161 PRRQVSCVNCAVSMPFEEKEIHDQTCPLANIICEYCGTVLIREQMPNHYDLDCPTAP-IP 219
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY----CSDGSQSTNTPSHG--RQD 215
C F GC E + L +H T H+ LL + S T++PS G +D
Sbjct: 220 CTFSVFGCHEKMQRNHL-ARHLQENTQLHMRLLAQAVHDVNLTLRSCDTSSPSRGCCPED 278
Query: 216 TSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVL 275
+ ++ I K+ ES+L D + E
Sbjct: 279 PNYEETI-------KQLESRLV------RQDHQIRE------------------------ 301
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q I V+ + ++ E+ + + CNG+Y WK+ NF LK +E
Sbjct: 302 LTAKMETQSIHVSELKRTIRTLEDKVAEMEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVI 361
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 362 HSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 421
Query: 391 NTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+ S + + + +F+RP N K FG+ F+ + + +G ++DD
Sbjct: 422 DQSEAVIRQNHEEVMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEAL---RQGTFVKDD 477
Query: 448 TFVIKTQVT 456
T +++ +V+
Sbjct: 478 TLLVRCEVS 486
>gi|195165238|ref|XP_002023446.1| GL20189 [Drosophila persimilis]
gi|194105551|gb|EDW27594.1| GL20189 [Drosophila persimilis]
Length = 445
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 195/447 (43%), Gaps = 93/447 (20%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDN 71
LD R+EC+IC+++L + +LTSCGH+FC C+ W+ + CP+D K L+ + DIF DN
Sbjct: 85 LDSRYECAICIDWLNEPVLTSCGHRFCKRCLTDWLQNHNQ-CCPLDNKQLSAEQDIFPDN 143
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI 131
YTRREI + LK+ P
Sbjct: 144 YTRREIEQ---------------------------LKHKCP------------------- 157
Query: 132 PTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKTSFH 190
NS + PE L + C F ++ C V + + LE+H H
Sbjct: 158 -----NSPLGCALPQPEQLEEK--------CPFAKIKCDFVGRPETNQLEEHLKSDMPHH 204
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSS 250
++L+ + + +T P TS ++N +L P + G D+
Sbjct: 205 MQLMLQAF-QQTAIATWQPQKASTSTSGGS------LENGHGHGQLAPPPQYANGVDEQ- 256
Query: 251 EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCN 310
+++ +Y+R+V+LEQ EQ+ ++ N L+ + D + N
Sbjct: 257 --------------IVQTMYQRIVVLEQRTREQETRIENLNKQLRLARQPIDP---RYSN 299
Query: 311 GVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHLV 369
G W + + + ++ N YS Y+S +GY+FC R+NI LSL +HL+
Sbjct: 300 GTIVWNIGHLGNLVSRLRANANNQVYSHECYTSPYGYKFCARLNIQPRKPHVLSLHVHLM 359
Query: 370 QGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNN 428
Q END LDWPF GRI+ ++ T + S D I + +F +P ++ + FGF
Sbjct: 360 QSENDFHLDWPFKGRIKLCMVHPTDASQSQHDTIMTKPEILAFHQPRE-AISTRGFGFLE 418
Query: 429 FIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ +++++ G + DD +IK ++
Sbjct: 419 YANISNIMHLG---FVADDRLLIKIEI 442
>gi|431915712|gb|ELK16045.1| TNF receptor-associated factor 6 [Pteropus alecto]
Length = 571
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 201/455 (44%), Gaps = 64/455 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L + +F DN+
Sbjct: 148 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLETQLFPDNF 206
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
+REIL + CP K C ++ + E H C L + + NT
Sbjct: 207 AKREILSLTVKCPNKGCLHKMELRHLEIHDQNCPLA-----------NVICEYCNT---- 251
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLE 192
+L P H ++ + PC F GC E + + L +H T H+
Sbjct: 252 -------MLIREQMPNHYDLDCPTAP-IPCTFSTFGCHEKMQ-RIHLARHLQENTQSHMR 302
Query: 193 LLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEG 252
+L S P Q+++ Y + S N + EG
Sbjct: 303 MLAQAVQSLNLALAPVP---------QRDMLPYDSASLPRVSGCHPEVPNFQETIQQLEG 353
Query: 253 DCSCKTCGDNSHLLKLVYE--RMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCN 310
+LV + ++ L M Q + V+ + ++ E+ + + CN
Sbjct: 354 --------------RLVIQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVAEIEAQQCN 399
Query: 311 GVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLF 365
G+Y WK+ NF LK +E +S FY+ GY+ C R+++ AQ Y+SLF
Sbjct: 400 GIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLF 459
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNK 421
+H +QGE D L WPF G IR T L+ SE I +EI K +F+RP N
Sbjct: 460 VHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPIRQNHEEIMDAKPELLAFQRP-TIPRNP 517
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 518 KGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 549
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACI 43
L+ ++EC ICL L++A+ T CGH+FC ACI
Sbjct: 42 LESKYECPICLMALREAVQTPCGHRFCKACI 72
>gi|149409636|ref|XP_001509071.1| PREDICTED: TNF receptor-associated factor 6-like [Ornithorhynchus
anatinus]
Length = 544
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 229/492 (46%), Gaps = 81/492 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVN----------TCYLKYSQPSVED--ITDS 120
+REIL + CP + C ++ + + E H + C++ + + + D +++
Sbjct: 123 AKREILSLMVRCPNEGCLMKMELRQLEEHQSLCDYALVECPQCHISFQKNILHDHVVSEC 182
Query: 121 P-----------TSSFRNTSGIPTN--------KRNSKILTVTVFPEHLNMQGSSNENFP 161
P + +F + N + S +L P H +M + P
Sbjct: 183 PRRQVSCVNCALSMAFEDKEYHDQNCPLASVFCEYCSTVLIREQMPTHYDMDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GCRE + L +H T H+ ++ +Q+ ++ S Q +
Sbjct: 242 CTFSSFGCREKMQRNQL-ARHLQDDTQAHMRMM--------AQALHSISITALTPVPQLD 292
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEG-DCSCKTCGDNSHLLKLVYERMVLLEQSM 280
+ + DP A +SS G DC + + ++ + R+V + +
Sbjct: 293 VLPF------------DP----ASLPRSSSGYDCHPEV-QNFQETIQQLEGRLVRQDHQI 335
Query: 281 LEQKIKV---NNFELNLKQT-EEIEDNVV---LKLCNGVYFWKMYNFPAKLKEMKEINR- 332
E K+ ++ ++LK+T +ED + + CNG+Y WK+ NF LK +E
Sbjct: 336 RELIAKMETQSSHVVDLKRTIRTLEDKIAEMEAQQCNGIYIWKIGNFGMHLKSQEEEKPV 395
Query: 333 YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFT 388
+S FY+ GY+ C R+++ +AQ Y+SLF+H +QGE D L WPF G IR T
Sbjct: 396 VIHSPGFYTGKPGYKLCMRLHLQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLT 455
Query: 389 ALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLM 444
L+ SE + +EI K +F+RP N K FG+ F+ + + R F+
Sbjct: 456 ILD-QSEAPVRQNHEEIMDTKPELLAFQRP-TIHRNPKGFGYVTFMHLQALRQ--RAFI- 510
Query: 445 EDDTFVIKTQVT 456
+DDT +++ +V+
Sbjct: 511 KDDTLLVRCEVS 522
>gi|291384848|ref|XP_002709100.1| PREDICTED: TNF receptor-associated factor 6 [Oryctolagus cuniculus]
Length = 540
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 211/489 (43%), Gaps = 79/489 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC------------YLKYSQPSVEDITDS 120
+REIL + CP + C ++ + E H C + Q + + D
Sbjct: 123 AKREILSLTVKCPNEGCLHKMELRHLEDHQAHCGFALVNCPQCQRPFQKCQINTHILKDC 182
Query: 121 PTSSFRNTSGI-----------PTNKRNSKILTVTV-----------FPEHLNMQGSSNE 158
P R S I + +N + V P H ++ +
Sbjct: 183 PR---RQVSCINCAVSMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAP 239
Query: 159 NFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN 218
PC F GC E + L +H KT H+ +L S T P
Sbjct: 240 -IPCTFSTFGCHEKMQRNHL-ARHLQEKTQLHMRMLAQAVHSLNLALTPIPP-------- 289
Query: 219 QKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE--RMVLL 276
+++ Y + ++ + N + EG +LV + ++ L
Sbjct: 290 -RDVPQYDVPSQPRVPSGYPEGHNFQETIQQLEG--------------RLVRQDHQIREL 334
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FY 335
M Q + V+ + ++ E+ + + CNG+Y WK+ NF LK +E +
Sbjct: 335 TAKMETQSMYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIH 394
Query: 336 SACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 395 SPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 454
Query: 392 TSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
SE I +EI K +F+RP N K FG+ F+ + + R F+ +DD
Sbjct: 455 -QSEAPIRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDD 509
Query: 448 TFVIKTQVT 456
T +++ +V+
Sbjct: 510 TLLVRCEVS 518
>gi|432113849|gb|ELK35961.1| TNF receptor-associated factor 6 [Myotis davidii]
Length = 461
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 199/459 (43%), Gaps = 76/459 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CPID ++L + +F DN+
Sbjct: 42 LESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHK-CPIDNEILLETQLFPDNF 100
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
+REIL + CP + C ++ + E H +C P I +
Sbjct: 101 AKREILSLMVRCPNEGCMHKMELRHLE-HDQSC------PLANVICEY------------ 141
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLE 192
S +L P H ++ + PC F GC E + + L +H T H+
Sbjct: 142 ----CSTMLIREQMPNHFDLDCPTAP-IPCTFSSFGCHEKMQ-RIHLARHLQENTQSHMR 195
Query: 193 LL------FNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGD 246
+L N + Q S R + E+ + ++ E +L D
Sbjct: 196 MLAQAVQSLNLAVAPMPQRYEPASLARVPSGCNSEVYNFQEIIQQLEGRLVR------QD 249
Query: 247 DKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVL 306
+ E L M Q + V+ + N++ E+ +
Sbjct: 250 HQIRE------------------------LTAKMETQSMYVSELKRNIRTLEDKVAEIEA 285
Query: 307 KLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----Y 361
+ CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++ AQ Y
Sbjct: 286 QQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANY 345
Query: 362 LSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSFKRPVNF 417
+SLF+H +QGE D L WPF G IR T L+ SE I +EI K +F+RP
Sbjct: 346 ISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPIRQNHEEIMDAKPELLAFQRP-TI 403
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 404 PRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 439
>gi|38348246|ref|NP_033450.2| TNF receptor-associated factor 6 [Mus musculus]
gi|288558832|sp|P70196.2|TRAF6_MOUSE RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|38173732|gb|AAH60705.1| TNF receptor-associated factor 6 [Mus musculus]
gi|74206917|dbj|BAE33263.1| unnamed protein product [Mus musculus]
gi|148695709|gb|EDL27656.1| Tnf receptor-associated factor 6, isoform CRA_a [Mus musculus]
gi|148695710|gb|EDL27657.1| Tnf receptor-associated factor 6, isoform CRA_a [Mus musculus]
Length = 530
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 202/488 (41%), Gaps = 87/488 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYL------------KYSQPSVEDITDS 120
+REIL + CP K C ++ + E H C + Q + I D
Sbjct: 123 AKREILSLTVKCPNKGCLQKMELRHLEDHQVHCEFALVNCPQCQRPFQKCQVNTHIIEDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K IL P H ++ + P
Sbjct: 183 PRRQVSCVNCAVSMAYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELL----FNKYCSDGSQSTNTPSHG-RQDT 216
C F GC E + L +H T H+ LL N + +PS G R +
Sbjct: 242 CTFSVFGCHEKMQRNHL-ARHLQENTQLHMRLLAQAVHNVNLALRPCDAASPSRGCRPED 300
Query: 217 SNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLL 276
N +E K+ ES+L D + E L
Sbjct: 301 PNYEET------IKQLESRLV------RQDHQIRE------------------------L 324
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FY 335
M Q + V + ++ E+ + + CNG+Y WK+ NF LK +E +
Sbjct: 325 TAKMETQSMYVGELKRTIRTLEDKVAEMEAQQCNGIYIWKIGNFGMHLKSQEEERPVVIH 384
Query: 336 SACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 385 SPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 444
Query: 392 TSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
S + + + +F+RP N K FG+ F+ + + +G ++DDT
Sbjct: 445 QSEALIRQNHEEVMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEAL---RQGTFIKDDT 500
Query: 449 FVIKTQVT 456
+++ +V+
Sbjct: 501 LLVRCEVS 508
>gi|410973582|ref|XP_003993227.1| PREDICTED: TNF receptor-associated factor 6 [Felis catus]
Length = 488
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 202/467 (43%), Gaps = 87/467 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCRACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
+REIL + CP + C ++ + E H C L + + NT
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEIHDQNCPLA-----------NVICEYCNT---- 167
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLE 192
+L P H ++ + PC F GC V + L +H T H+
Sbjct: 168 -------MLIREQMPNHYDLDCPTAP-IPCTFSTFGCH-VKMQRNHLARHLQENTQSHMR 218
Query: 193 LLFNKYCSDGSQSTNTP----------SHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKN 242
+L S P S R T E++ + ++ E +L
Sbjct: 219 MLAQAVQSLSLALPPVPQCDMPPYDSSSASRVSTGCHPEVQNFQETIQQLEGRLVR---- 274
Query: 243 QAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQT-EEIE 301
H ++ + +M QSM + LKQT +E
Sbjct: 275 -------------------QDHQIRELIAKME--TQSM---------YVSELKQTIRTLE 304
Query: 302 DNVV---LKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNISRE 357
D VV + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 305 DKVVEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLP 364
Query: 358 DAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFD 409
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE I +EI K
Sbjct: 365 SAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPIRQNHEEIMDAKPELL 423
Query: 410 SFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 424 AFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 466
>gi|157427701|ref|NP_001098756.1| TNF receptor-associated factor 6 [Sus scrofa]
gi|288559148|sp|A7XUJ6.1|TRAF6_PIG RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|156530444|gb|ABU75303.1| TNF receptor-associated factor 6 [Sus scrofa]
Length = 541
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 217/467 (46%), Gaps = 35/467 (7%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP C ++ + E H C + + P + +
Sbjct: 124 AKREILSLTVKCPNVGCLHKMELRHLEDHQAHCEFALMNCPQCQRPFQKCQLNIHILKEC 183
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + + V++ E ++ Q N C++ C V + + HYDL +
Sbjct: 184 PRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEY----CNTVLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ F+ + C + Q + H +++T + + A ++ + P ++ D
Sbjct: 239 APVPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMMAQALQGLS-LAVAPVPQRDMLPYD 297
Query: 248 KSSEGDCSCKTCGDNS--HLLKLVYERMVL-------LEQSMLEQKIKVNNFELNLKQTE 298
S S C D + ++ + R+V L M Q + V+ + ++ E
Sbjct: 298 SSPLSRISSGCCSDQNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRSLE 357
Query: 299 EIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRE 357
+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 358 DKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLP 417
Query: 358 DAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFD 409
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE I +EI K
Sbjct: 418 TAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPIRQNHEEIMDAKPELL 476
Query: 410 SFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + D L R F+ +DDT +++ +V+
Sbjct: 477 AFQRPT-IPRNPKGFGYVTFMHL-DALR-QRTFI-KDDTLLVRCEVS 519
>gi|351700074|gb|EHB02993.1| TNF receptor-associated factor 6 [Heterocephalus glaber]
Length = 543
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 212/487 (43%), Gaps = 74/487 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYL------------KYSQPSVEDITDS 120
+REIL + CP + C ++ + E H C + Q ++ +TD
Sbjct: 125 AKREILSLMVKCPNEGCLHKMELRHLEDHQVLCEFALVNCSQCQRPFQKCQLNIHILTDC 184
Query: 121 P---TSSFRNTSGIP-----TNKRNSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S +P + +N + V P H ++ + P
Sbjct: 185 PRRQVSCVNCAVSMPFEEKEIHDQNCPLANVICEYCHTMLIREQMPTHYDLDCPTAP-IP 243
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L S T P ++
Sbjct: 244 CTFSTFGCHEKMQRNHL-ARHLQENTQSHMRMLAQAVHSLNLALTPVPP---------RD 293
Query: 222 IEAYLMKNKEHESKLWDPN-KNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE--RMVLLEQ 278
+ Y + S P +N + EG +LV + ++ L
Sbjct: 294 LLPYDAASLPRVSSGCHPEVQNFQETIQQLEG--------------RLVRQDHQIRELTA 339
Query: 279 SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSA 337
M Q + VN + ++ E+ + + CNG+Y WK+ NF LK +E +S
Sbjct: 340 KMETQCMYVNELKGTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSP 399
Query: 338 CFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 400 GFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-Q 458
Query: 394 SEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTF 449
SE + +EI K +F+RP N K FG+ F+ + + R F+ +DDT
Sbjct: 459 SEAPVRQNHEEIMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTL 514
Query: 450 VIKTQVT 456
+++ +V+
Sbjct: 515 LVRCEVS 521
>gi|395815540|ref|XP_003781284.1| PREDICTED: TNF receptor-associated factor 6 [Otolemur garnettii]
Length = 535
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 213/465 (45%), Gaps = 36/465 (7%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++ + T CGH+FC ACI I G + CPID ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREPVQTPCGHRFCKACIIKSIRDAG-HKCPIDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + + P + +
Sbjct: 123 AKREILSLTVKCPNEGCLHRMELRHLEDHQAYCEFALMNCPQCQRPFQKCEINVHILKDC 182
Query: 132 PTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCR--EVFKSQALLEKHYDLK-TS 188
P + ++ E + + + C V C + + HYDL +
Sbjct: 183 PRRQ-----VSCANCAELMPFEDKEIHDQTCPLANVICEYCNTMLIREQMPNHYDLDCPT 237
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLW---DPNKNQA 244
+ FN + C D Q + H +++T + + A + H L P ++
Sbjct: 238 APIPCTFNTFGCHDKMQRNHLARHLQENTQSHMRMLAQAV----HSLSLALTPIPQRDAF 293
Query: 245 GDDKSSEGDCSCKTCGDNSHLL--KLVYE--RMVLLEQSMLEQKIKVNNFELNLKQTEEI 300
D +S + + H L +LV + ++ L M Q + V+ + ++ E+
Sbjct: 294 ARDPASLPRVPSQDFQETIHQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRSLEDK 353
Query: 301 EDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
+ + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++ A
Sbjct: 354 VAEIEAQQCNGIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGKPGYKLCMRLHLQLPTA 413
Query: 360 Q----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSF 411
Q Y+SLF+H +QGE D L WPF G IR T L+ SE I +EI K +F
Sbjct: 414 QRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSETPIRQNHEEIMDAKPELLAF 472
Query: 412 KRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+RP N K FG+ F+ + D L R F+ +DDT +++ +VT
Sbjct: 473 QRPT-IPRNPKGFGYVTFMHL-DALK-QRTFI-KDDTLLVRCEVT 513
>gi|440911212|gb|ELR60914.1| hypothetical protein M91_01211 [Bos grunniens mutus]
Length = 520
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 216/469 (46%), Gaps = 38/469 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 43 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 101
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + +E H C + S P + +
Sbjct: 102 AKREILSLMVKCPNEGCLHKMELRHFEEHQAHCEFALMSCPQCQRPFQKCHLNIHILKEC 161
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + + V++ E ++ Q N C++ C + + + HYDL +
Sbjct: 162 PRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEY----CNTMLIREQM-PNHYDLDCPT 216
Query: 189 FHLELLFNKY-CSDGSQ--------STNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD- 238
+ F+ + C + Q NT SH R + + + + L+D
Sbjct: 217 APVPCTFSAFGCHEKMQRNHLACHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDS 276
Query: 239 --PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQ 296
P + +G + SE +T L ++ L M Q + VN + ++
Sbjct: 277 VPPTRPSSG--RHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRT 334
Query: 297 TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNIS 355
E+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 335 LEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQ 394
Query: 356 REDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-N 407
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE ++ +EI K
Sbjct: 395 LPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAAVRQNHEEIMDAKPE 453
Query: 408 FDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 454 LLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 498
>gi|390342845|ref|XP_789994.3| PREDICTED: TNF receptor-associated factor 6-A-like
[Strongylocentrotus purpuratus]
Length = 631
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 219/518 (42%), Gaps = 81/518 (15%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
LDP++EC ICL L+D + T CGH+FC+ CI + G CP+D LT+ +F D
Sbjct: 116 TLDPKYECPICLMCLRDPVQTECGHRFCSDCIKRCLRNAGLR-CPVDNVSLTEAQMFPDV 174
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDS----------- 120
RREIL+ CPY+ C L + + ESH +C + ++P S
Sbjct: 175 CVRREILDLQARCPYQDCPDLLELRDIESHKESCSYR-TEPCPNQCGASMRRRSIDRHVE 233
Query: 121 ---PTSSF---------------RNTSGIPTNKRNSKILTVTVFPEHLNMQGS---SNEN 159
P R+ + P + + V +HL++ +
Sbjct: 234 KECPRRLIECTYCRGPLCFNQKERHHAECPKRPISCEYCHKEVLSDHLHIHHQHDCTEIP 293
Query: 160 FPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHG----RQD 215
PC+F GC E + + H HL+L+ + + +Q T S+ R
Sbjct: 294 VPCQFASFGCSERLPKERMA-IHVSQSMEAHLQLMAIHFQNQQTQLPRTTSYPGTSWRMG 352
Query: 216 TSNQKEIEAY-------LMKNKEHESKLWDPN---KNQAGDDKSSEGDCSCKTCGDNSH- 264
+ ++ + + EH ++ DP + Q G + G +
Sbjct: 353 ATYDSQMSEFATAAGGKITDVHEHGARKLDPEQLVRTQIGPSNYVTSPSVMPSFGSGAFD 412
Query: 265 ----------LLKLVYERMVLLEQSMLEQKIK-------VNNFELNLKQTEEIEDNVVLK 307
+K + E+ V + Q ++E + K + + +E ++
Sbjct: 413 PMDQFRALRITVKELQEKEVWMRQKVIELESKAARKDSEIATLRNEVHSLQEETKDLREH 472
Query: 308 LCNGVYFWKMYNFPAKLKEMKEINRYF--YSACFYSSCFGYRFCTRVNISREDAQ---YL 362
+ NG++ W++ + ++L+ E +S FY+ GYR C RVNI++ + + Y+
Sbjct: 473 VANGIFVWRLRKY-SELRVSAERGEAMVRHSEGFYTGSCGYRLCVRVNINKSETRKVLYI 531
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTAL--NTSSEF---SITDEIQSDKNFDSFKRPVNF 417
SLF+H +QG+ D L+WPF G I + + N E +IT+ + + N D+FK+P
Sbjct: 532 SLFVHFMQGKYDSSLEWPFRGSITLSLVDQNIDPELKQKNITERLVAKSNLDAFKKP-KT 590
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N K FG+ F + + G ++D+T +IK +V
Sbjct: 591 ARNHKGFGYMEFASIESLEK--EGLFIKDNTILIKVEV 626
>gi|298204321|gb|ADF56651.2| TNF receptor-associated factor 6 a [Cyprinus carpio]
Length = 543
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 208/492 (42%), Gaps = 83/492 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ T CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 66 LESKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQK-CPVDNEVLLEEQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY-------------------SQPS 113
+REIL + CP CS ++ + + E H++ C SQ
Sbjct: 125 AKREILSLTVRCPNVGCSDKMELRQLEKHLSHCKFATVPCPQCLESVRKSHLDEHKSQQC 184
Query: 114 VEDITDSPTSSFRNTSGIPTNKRNSKILT-----------VTVFPEHLNMQGSSN---EN 159
++ + P + S + NK+ + + + + + L + ++
Sbjct: 185 LQRLMTCPACA---GSFVYANKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCLKAP 241
Query: 160 FPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQ 219
C F GCRE L + H T H+ + S S PS +S++
Sbjct: 242 VACTFSTFGCREKMPRNELAQ-HMQEFTQMHMRYMAEFLRSQSLSSCPVPSIAAHSSSDE 300
Query: 220 KEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE---RMVLL 276
+ G + C CK + +L + V E R+V
Sbjct: 301 R------------------------GATARAPESCQCKP--ELMNLRETVLELEGRLVRQ 334
Query: 277 EQSMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKE 329
+Q + E QK +V L EE + + GVY W++ NF L+ +
Sbjct: 335 DQQIRELCIHNETQKNQVTELRRKLSSLEEATRELEAQQYQGVYVWRLENFSLHLRNQEA 394
Query: 330 INR-YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGR 384
+S FY+ GY+ C R+++ +A Y+SLF+H +QGE D L WP G
Sbjct: 395 GQPIVLHSPPFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGEFDSQLSWPLQGT 454
Query: 385 IRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLM 444
IR L+ + +++ + +F+RP N K FG+ F+ + VL RGF+
Sbjct: 455 IRLAVLDQVEGEHHVEVMETKPDLQAFQRP-TVLRNPKGFGYVTFLHL-QVLQ-QRGFV- 510
Query: 445 EDDTFVIKTQVT 456
+DD +++ +VT
Sbjct: 511 KDDVLLVRCEVT 522
>gi|426245316|ref|XP_004016459.1| PREDICTED: TNF receptor-associated factor 6 [Ovis aries]
Length = 542
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 217/469 (46%), Gaps = 38/469 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + S P + + +F
Sbjct: 124 AKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRLFQKCHLNFHILKEC 183
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + + V + E ++ Q N C++ C + + + HYDL +
Sbjct: 184 PRRQVPCENCAVLMAFEDKEIHEQNCPLANVICEY----CNTMLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN----KEHESKLWDPNKNQ 243
+ F+ + C + Q + H +++T + + A ++ + P +
Sbjct: 239 APVPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPAPQCTMPPYDS 298
Query: 244 AGDDKSSEGDCSCKTCGDNSHLLKLVYERMVL-------LEQSMLEQKIKVNNFELNLKQ 296
+ S G S + ++ + R+V L M Q + V+ + ++
Sbjct: 299 VPPTRPSSGRHS--EVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRT 356
Query: 297 TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNIS 355
E+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 357 LEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQ 416
Query: 356 REDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-N 407
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE ++ +EI K
Sbjct: 417 LPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAAVRQNHEEIMDAKPE 475
Query: 408 FDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 476 LLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 520
>gi|1651195|dbj|BAA12705.1| TRAF6 [Mus musculus]
Length = 530
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 201/488 (41%), Gaps = 87/488 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYL------------KYSQPSVEDITDS 120
+REIL + CP K C ++ + E H C + Q + I D
Sbjct: 123 AKREILSLTVKCPNKGCLQKMELRHLEDHQVHCEFALVNCPQCQRPFQKCQVNTHIIEDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K IL P H ++ + P
Sbjct: 183 PRRQVSCVNCAVSMAYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELL----FNKYCSDGSQSTNTPSHG-RQDT 216
C F GC + + L +H T H+ LL N + +PS G R +
Sbjct: 242 CTFSVFGCHQKMQRNHL-ARHLQENTQLHMRLLAQAVHNVNLALRPCDAASPSRGCRPED 300
Query: 217 SNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLL 276
N +E K+ ES+L D + E L
Sbjct: 301 PNYEET------IKQLESRLV------RQDHQIRE------------------------L 324
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FY 335
M Q + V + ++ E+ + + CNG+Y WK+ F LK +E +
Sbjct: 325 TAKMETQSMYVGELKRTIRTLEDKVAEMEAQQCNGIYIWKIGKFGMHLKSQEEERPVVIH 384
Query: 336 SACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 385 SPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 444
Query: 392 TSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
S + + + +F+RP N K FG+ F+ + + +G ++DDT
Sbjct: 445 QSEALIRQNHEEVMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEAL---RQGTFIKDDT 500
Query: 449 FVIKTQVT 456
+++ +V+
Sbjct: 501 LLVRCEVS 508
>gi|93278159|gb|ABF06558.1| TNF receptor-associated factor 6 [Bos taurus]
Length = 542
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 218/469 (46%), Gaps = 38/469 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + S P + +
Sbjct: 124 AKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHILKEC 183
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + + V++ E ++ Q N C++ C + + + HYDL +
Sbjct: 184 PRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEY----CNTMLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN--------KEHESKLWD- 238
+ F+ + C + Q + H +++T + + A ++ + L+D
Sbjct: 239 APVPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDS 298
Query: 239 --PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQ 296
P + +G + SE +T L ++ L M Q + VN + ++
Sbjct: 299 VPPTRPSSG--RHSEVHNFQETIQQLEGRLVXQDHQIRELTAKMETQSMYVNELKRTIRT 356
Query: 297 TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNIS 355
E+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 357 LEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQ 416
Query: 356 REDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-N 407
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE ++ +EI K
Sbjct: 417 LPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAAVRQNHEEIMDAKPE 475
Query: 408 FDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 476 LLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 520
>gi|77736267|ref|NP_001029833.1| TNF receptor-associated factor 6 [Bos taurus]
gi|122146515|sp|Q3ZCC3.1|TRAF6_BOVIN RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|73587333|gb|AAI02523.1| TNF receptor-associated factor 6 [Bos taurus]
gi|83853856|gb|ABC47877.1| TNF receptor-associated factor 6 [Bos taurus]
gi|89357342|gb|ABD72516.1| TNF receptor-associated factor 6 [Bos taurus]
gi|296479725|tpg|DAA21840.1| TPA: TNF receptor-associated factor 6 [Bos taurus]
Length = 542
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 218/469 (46%), Gaps = 38/469 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + S P + +
Sbjct: 124 AKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHILKEC 183
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + + V++ E ++ Q N C++ C + + + HYDL +
Sbjct: 184 PRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEY----CNTMLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN--------KEHESKLWD- 238
+ F+ + C + Q + H +++T + + A ++ + L+D
Sbjct: 239 APVPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDS 298
Query: 239 --PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQ 296
P + +G + SE +T L ++ L M Q + VN + ++
Sbjct: 299 VPPTRPSSG--RHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRT 356
Query: 297 TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNIS 355
E+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 357 LEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQ 416
Query: 356 REDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-N 407
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE ++ +EI K
Sbjct: 417 LPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAAVRQNHEEIMDAKPE 475
Query: 408 FDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 476 LLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 520
>gi|440910080|gb|ELR59912.1| TNF receptor-associated factor 6 [Bos grunniens mutus]
Length = 542
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 215/469 (45%), Gaps = 38/469 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + S P + +
Sbjct: 124 AKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHILKEC 183
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + + V++ E ++ Q N C++ C + + + HYDL +
Sbjct: 184 PRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEY----CNTMLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQ--------STNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD- 238
+ F+ + C + Q NT SH R + + + + L+D
Sbjct: 239 APVPCTFSAFGCHEKMQRNHLACHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDS 298
Query: 239 --PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQ 296
P + +G + SE +T L ++ L M Q + VN + ++
Sbjct: 299 VPPTRPSSG--RHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRT 356
Query: 297 TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNIS 355
E+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 357 LEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQ 416
Query: 356 REDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-N 407
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE ++ +EI K
Sbjct: 417 LPSAQRCTNYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAAVRQNHEEIMDAKPE 475
Query: 408 FDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 476 LLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 520
>gi|288558690|dbj|BAI68387.1| TNF receptor-associated factor 6 [Plecoglossus altivelis altivelis]
gi|288558692|dbj|BAI68388.1| TNF receptor-associated factor 6 [Plecoglossus altivelis altivelis]
Length = 556
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 212/486 (43%), Gaps = 46/486 (9%)
Query: 5 PVANNKLNLDP----RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK 60
P + DP ++EC ICL L+ A+ T CGH+FC +CI+ I G+ CP+D +
Sbjct: 60 PAQGYDVEFDPPLESKYECPICLMALRAAVQTPCGHRFCRSCIEKSIRDTGQR-CPVDNE 118
Query: 61 VLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITD 119
+L ++ +F DN+ +REIL + CP K C ++ + ESHVN C + P +D+
Sbjct: 119 ILLENQLFPDNFAKREILSLTVRCPNKDCVEKMELRHLESHVNQCQFATVPCPLCQDLVR 178
Query: 120 SPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCR----EVFKS 175
S + + +R E + S C F V C+ E+ +
Sbjct: 179 K--SQLEEHTSLQCQQRPVSCPDCV---ESFVYEESELHKQRCPFANVSCQYCDMELIRD 233
Query: 176 QALLEKHYDLKTS-FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQ----KEIEAYLMKN 229
+ LE H D+ + F+ + C + + H ++ T E + L N
Sbjct: 234 R--LESHCDMDCQKAPIACPFSMFGCRERMLRHDLAQHMQEFTQMHMHYMAEFLSRLSIN 291
Query: 230 KEHESKLWDPNKNQAGDDKSSEGDCSCKTCG----------DNSHL-LKLVYERMVLLEQ 278
+ + + G+ + + C C HL +LV + L E
Sbjct: 292 EIQSQPSGAASPDMPGEVRGAGPSCRASPCQCSMERQALKETTQHLDGRLVRQDHQLREL 351
Query: 279 SMLE--QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFY 335
S+ + Q ++ + EE + + C G++ W++ F A L+ + + +
Sbjct: 352 SIHKDNQSTQLMELRRKVASLEETVRELEAQQCQGIFVWRLEGFSAHLRTQEGGHPVVVH 411
Query: 336 SACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
S FY+ GY+ C R+++ A Y+SLF+H +QG D L WP G IR L+
Sbjct: 412 SPGFYTGRPGYKLCLRLHLQTPTAPRCSNYISLFVHTMQGAFDSQLSWPLQGSIRLAVLD 471
Query: 392 TSSEFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ E E+ K + +F++P N K FG+ F+ + + +GF+ +DDT +
Sbjct: 472 QNPEGHHHVEVMETKPDLQAFQKP-TLHRNPKGFGYVTFLHLQQLQQ--KGFI-KDDTLL 527
Query: 451 IKTQVT 456
++ +VT
Sbjct: 528 VRCEVT 533
>gi|395543668|ref|XP_003773736.1| PREDICTED: TNF receptor-associated factor 6 [Sarcophilus harrisii]
Length = 530
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 215/483 (44%), Gaps = 79/483 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESH----------VNTCYLKYSQPSVED--ITDS 120
+REIL + CP + C ++ + E H + C+L + + + + +T+
Sbjct: 123 AKREILSLTVKCPNEGCLLKMELRHLEDHQTHCEFALVECSQCHLSFRKYLLHNHMLTEC 182
Query: 121 P---TSSFRNTSGIPTNKR-----NSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S + +P ++ N + TV P H ++ + P
Sbjct: 183 PRRQVSCVNCAAPMPFEEKEFHDQNCPLATVFCKYCNTMLIREQMPNHYDIDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC + + L +H T H+ ++ + S + P R + +E
Sbjct: 242 CTFSTFGCDKKMQRNHL-ARHLQEDTLAHMRMMAQAI-QNISIAAFDPGVPRIPSGCHQE 299
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
++ + ++ ES+L D + E L M
Sbjct: 300 VQNFQETIQQLESRLV------MQDHQIRE------------------------LTAKME 329
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFY 340
Q V + + ++ E+ + + CNG+Y WK+ NF LK +E +S FY
Sbjct: 330 TQSACVGDLKRTIRTLEDKITEMEAQQCNGIYIWKINNFGMHLKSQEEEKPVVIHSPGFY 389
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 390 TGKPGYKLCMRLHLQLPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 448
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +E+ K + +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 449 PVRQNHEEVMDAKPDLLAFQRPT-IPRNPKGFGYVTFMHLQALRQ--RTFI-KDDTLLVR 504
Query: 453 TQV 455
+V
Sbjct: 505 CEV 507
>gi|126332583|ref|XP_001362131.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Monodelphis
domestica]
Length = 540
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 206/488 (42%), Gaps = 79/488 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D +L + +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAG-HKCPVDNAILLETQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC----------------YLKYSQPSVED 116
+REIL + CP + C ++ + E H C YL ++ VE
Sbjct: 123 AKREILSLTVKCPNEGCLLKMELRHLEDHQTHCEFALAECPQCHLPFRKYLLHNHMVVE- 181
Query: 117 ITDSPTSSFRNTSGIPTNKRN----------------SKILTVTVFPEHLNMQGSSNENF 160
S + +P ++ S +L P H ++
Sbjct: 182 CPRRQVSCVNCAAPMPFEEKEFHDQNCPLATVFCEYCSTMLIREQMPNHYDIDCPVAP-I 240
Query: 161 PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQK 220
PC F GCRE L +H T H+ ++ +Q+ S
Sbjct: 241 PCTFSTFGCREKMPRNHL-ARHLQEDTLAHMRMM--------AQAIENIS---------- 281
Query: 221 EIEAYLMKNKEHESKLWD----PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLL 276
I A+ K + E+ +D P G E T L + ++ L
Sbjct: 282 -IAAFNPKLHQREASSYDTSPLPRTPYPGPQNFQE------TIQQLESRLVIQDHQIREL 334
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FY 335
M Q V + + ++ E+ + + CNG+Y WK+ NF LK +E +
Sbjct: 335 TAKMETQSACVGDLKRTIRTLEDRIAEMEAQQCNGIYIWKINNFGMHLKSQEEEKPVVIH 394
Query: 336 SACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 395 SPGFYTGKPGYKLCMRLHLQLPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 454
Query: 392 TSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
SE + +EI K +F+RP N K FG+ F+ + + R F+ +DD
Sbjct: 455 -QSEAPVRQNHEEIMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLQALKQ--RTFI-KDD 509
Query: 448 TFVIKTQV 455
T +++ +V
Sbjct: 510 TLLVRCEV 517
>gi|403254596|ref|XP_003920048.1| PREDICTED: TNF receptor-associated factor 6 [Saimiri boliviensis
boliviensis]
Length = 523
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 211/488 (43%), Gaps = 94/488 (19%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYL------------KYSQPSVEDITDS 120
+REIL + CP + C ++ + E H C + Q ++ + D
Sbjct: 123 AKREILSLMVRCPNEGCLHKMELRHLEDHQVHCEFALMDCPQCQRPFQKCQINIHVLKDC 182
Query: 121 P-----------TSSFRNTSGIPTNKRNSKIL-----TVTV---FPEHLNMQGSSNENFP 161
P + +F + N + +L TV + P H ++ + P
Sbjct: 183 PRRQVSCVNCAASMAFEDKEIHDQNCPLANVLCEYCNTVLIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR----QDTS 217
C F GC E + L +H T H+ +L S T P Q+T
Sbjct: 242 CTFSTFGCHEKMQRNHL-ARHLQENTQSHMRMLAQAVHSLSLTLTPAPPTPEVWNFQETI 300
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLE 277
+Q +E L++ ++H+ + L
Sbjct: 301 HQ--LEGRLVR-QDHQIRE---------------------------------------LT 318
Query: 278 QSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYS 336
M Q + VN ++ E+ + + CNG+Y WK+ NF LK + +E +S
Sbjct: 319 AKMETQGMYVNELRRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKCQEEEKPVVIHS 378
Query: 337 ACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNT 392
FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 379 PGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD- 437
Query: 393 SSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
SE + +EI K +F+RP N K FG+ F+ + + R F+ +DDT
Sbjct: 438 QSEAPVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDT 493
Query: 449 FVIKTQVT 456
+++ +V+
Sbjct: 494 LLVRCEVS 501
>gi|348556143|ref|XP_003463882.1| PREDICTED: TNF receptor-associated factor 6-like [Cavia porcellus]
Length = 543
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 220/476 (46%), Gaps = 52/476 (10%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCY------------LKYSQPSVEDITDS 120
+REIL + CP + C ++ + E H C ++ Q ++ + D
Sbjct: 125 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALINCLQCQRPIQKCQLNIHILKDC 184
Query: 121 PTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLE 180
P R S I + +++ + ++ Q N C++ C V + +
Sbjct: 185 PR---RQVSCI------NCAVSMAFEEKEIHDQNCPLANVICEY----CHTVLIREQM-P 230
Query: 181 KHYDLK-TSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD 238
HYDL + + F+ + C + Q + H +++T + + A + +
Sbjct: 231 THYDLDCPTAPVPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLNLALTPAP 290
Query: 239 PNKNQAGDDKS-SEGDCSCKTCGDN-SHLLKLVYERMVLLEQSMLEQKIKVNN---FELN 293
P D S S C + N ++ + R+V + + E K+ +
Sbjct: 291 PRDMLPYDSASLSRVSSGCHSEVQNFQETIQQLEGRLVRQDHQIRELTAKMETQCTYVSE 350
Query: 294 LKQT-EEIEDNVV---LKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRF 348
LK+T +ED V + CNG+Y WK+ NF LK +E +S FY+ GY+
Sbjct: 351 LKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKL 410
Query: 349 CTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DE 401
C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE + +E
Sbjct: 411 CMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEE 469
Query: 402 IQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
I K +F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 470 IMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 521
>gi|417402531|gb|JAA48111.1| Putative tnf receptor-associated factor 6 [Desmodus rotundus]
Length = 541
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 211/487 (43%), Gaps = 74/487 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L + +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLETQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYS------QP------SVEDITDS 120
+REIL + CP C ++ + E H C + +P ++ + +
Sbjct: 123 AKREILSLMVKCPNGGCLHKMELRHLEDHQVHCEFALTNCPQCQRPFQKCHLNIHILKEC 182
Query: 121 PTSSFRNTSGI-----------PTNKRNSKILTVTV-----------FPEHLNMQGSSNE 158
P R S I + +N + V P H ++ +
Sbjct: 183 PR---RQVSCINCAVSMAFEDKEIHDQNCPLANVVCEYCNTMLIREQMPNHFDLDCPTAP 239
Query: 159 NFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN 218
PC F GC E + + L +H T H+ +L + QS N R
Sbjct: 240 -IPCTFSTFGCHEKMQ-RIHLARHLQENTQSHMRML-----AQAVQSLNLAVAPR----P 288
Query: 219 QKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQ 278
Q+++ Y + S P + S L++ ++ + L
Sbjct: 289 QRDMLPYESSSLPRISSGCHPEVQNFQETIQQL----------ESRLVRQDHQ-IRELTA 337
Query: 279 SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSA 337
M Q I V+ + ++ E+ + + CNG+Y WK+ NF L+ +E +S
Sbjct: 338 KMETQSIYVSELKRTIRSLEDKVAEIEAQQCNGIYIWKIGNFGMHLRSQEEEKPVVIHSP 397
Query: 338 CFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 398 GFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-Q 456
Query: 394 SEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTF 449
SE I +EI K +F+RP N K FG+ F+ + + R F+ +DDT
Sbjct: 457 SEAPIRQNHEEIMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTL 512
Query: 450 VIKTQVT 456
+++ +VT
Sbjct: 513 LVRCEVT 519
>gi|296217925|ref|XP_002755232.1| PREDICTED: TNF receptor-associated factor 6 [Callithrix jacchus]
Length = 523
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 205/488 (42%), Gaps = 94/488 (19%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYL------------KYSQPSVEDITDS 120
+REIL + CP + C ++ + E H C + Q ++ + D
Sbjct: 123 AKREILSLMVRCPNEGCLHKMELRHLEDHQVHCEFALMDCPQCQRPFQKCQINIHILKDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K +L P H ++ + P
Sbjct: 183 PRRQVSCVNCAASMAFEDKEIHDQNCPLANVVCEYCNTVLIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR----QDTS 217
C F GC E + L +H T H+ +L S T P Q+T
Sbjct: 242 CTFSTFGCHEKMQRNHL-ARHLQENTQSHMRMLAQAVHSLSLTLTPAPPTPEVWNFQETI 300
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLE 277
+Q +E L++ ++H+ + L
Sbjct: 301 HQ--LEGRLVR-QDHQIRE---------------------------------------LT 318
Query: 278 QSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYS 336
M Q + VN ++ E+ + + CNG+Y WK+ NF LK + +E +S
Sbjct: 319 AKMETQGMYVNELRRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKCQEEEKPVVIHS 378
Query: 337 ACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNT 392
FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 379 PGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD- 437
Query: 393 SSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
SE + +EI K +F+RP N K FG+ F+ + + R F+ +DDT
Sbjct: 438 QSEAPVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDT 493
Query: 449 FVIKTQVT 456
+++ +V+
Sbjct: 494 LLVRCEVS 501
>gi|345783121|ref|XP_003432370.1| PREDICTED: TNF receptor-associated factor 6 [Canis lupus
familiaris]
Length = 541
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 212/487 (43%), Gaps = 74/487 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC------------YLKYSQPSVEDITDS 120
+REIL + CP + C ++ + E H C + Q ++ + +
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQLHCEFALMNCLQCQRTFQKCQLNIHILKEC 182
Query: 121 PTS--SFRNTSGI------PTNKRNSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S N + + + +N + V P H ++ + P
Sbjct: 183 PRRQVSCMNCAALMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC V + L +H T H+ +L S P Q++
Sbjct: 242 CTFSTFGC-HVKMQRNHLARHLQENTQSHMRMLGQAVQSLSLALAPVP---------QRD 291
Query: 222 IEAYLMKNKEHESKLWDPN-KNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE--RMVLLEQ 278
+ Y + S P +N + EG +LV + ++ L
Sbjct: 292 VPPYDSSSVSRVSSTCHPEVQNFQETIQQLEG--------------RLVRQDHQIRELTA 337
Query: 279 SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSA 337
M Q + V+ + N++ E+ + + CNG+Y WK+ NF LK +E +S
Sbjct: 338 KMETQSMHVSELKRNIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSP 397
Query: 338 CFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR L+
Sbjct: 398 GFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLAILD-Q 456
Query: 394 SEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTF 449
SE + +EI K +F+RP N K FG+ F+ + + R F+ +DDT
Sbjct: 457 SEAPVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTL 512
Query: 450 VIKTQVT 456
+++ +V+
Sbjct: 513 LVRCEVS 519
>gi|426368015|ref|XP_004051013.1| PREDICTED: TNF receptor-associated factor 6 [Gorilla gorilla
gorilla]
Length = 471
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 201/455 (44%), Gaps = 80/455 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSG 130
+REIL + CP + C ++ + E + H C L + + NT
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEMQIHDQNCPLA-----------NVICEYCNT-- 169
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFH 190
IL P H ++ + PC F GC E + L +H T H
Sbjct: 170 ---------ILIREQMPNHYDLDCPTAP-IPCTFSTFGCHEKMQRNHL-ARHLQENTQSH 218
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSS 250
+ +L +Q+ ++ S D+ E+ + + E +L D +
Sbjct: 219 MRML--------AQAVHSLSL-IPDSGYISEVRNFQETIHQLEGRLVR------QDHQIR 263
Query: 251 EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCN 310
E L M Q + V+ + ++ E+ + + CN
Sbjct: 264 E------------------------LTAKMETQSMYVSELKRTIRTLEDKVAEIEAQQCN 299
Query: 311 GVYFWKMYNFPAKLK-EMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLF 365
G+Y WK+ NF LK + +E +S FY+ GY+ C R+++ AQ Y+SLF
Sbjct: 300 GIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLF 359
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNK 421
+H +QGE D L WPF G IR T L+ SE + +EI K +F+RP N
Sbjct: 360 VHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEEIMDAKPELLAFQRP-TIPRNP 417
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 418 KGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 449
>gi|148225312|ref|NP_001086348.1| TNF receptor-associated factor 6-B [Xenopus laevis]
gi|82236068|sp|Q6DJN2.1|TRF6B_XENLA RecName: Full=TNF receptor-associated factor 6-B; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|49522101|gb|AAH75143.1| MGC81955 protein [Xenopus laevis]
Length = 556
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 209/488 (42%), Gaps = 74/488 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI + G CP+D ++L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIVKSLRDAGHK-CPVDNEILMENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLK----------YSQPSVEDITDSPT 122
+REIL + CP + C+ + + E H+ C + + +E +
Sbjct: 125 AKREILSLKVKCPSQGCTETMELRHLERHLGQCQFASVECSQCQGSFPKSRLEKHMEHEC 184
Query: 123 S-------------SFRNTSG--------IPTNKRNSKILTVTVFPEHLNMQGSSNENFP 161
++ + SG T + L P H +M + P
Sbjct: 185 GRRKIFCDNCGLAMAYEDMSGHELICPLAYVTCEYCQTNLIREQMPSHYSMD-CTMAPIP 243
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTS---- 217
C +Y+ GC E + L +H T H+ ++F S + TP+ D S
Sbjct: 244 CMYYEFGCTEKMQRNDL-ARHLQDFTQAHMRMMFQTLRS----FSTTPTSHISDISFCDP 298
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLE 277
NQ E L H S + S DCS +T + ++ + R+V +
Sbjct: 299 NQFE-PVPLSVAPAHPSHM------------PSHQDCSQET-RNLRETIEQLEGRLVRQD 344
Query: 278 QSMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+ E Q VN + ++ E+ +V CNGV+ WK+ F K +E
Sbjct: 345 HQIRELIAKMETQCTYVNELKHTIRSLEDKLLDVDGHHCNGVFIWKIKGFSGLQKTQEEE 404
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRI 385
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L WP G I
Sbjct: 405 KPVVIHSPGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLHGTI 464
Query: 386 RFTALNTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGF 442
R + L+ S I D+ + + + +F+RP N K FG+ F+ + + R +
Sbjct: 465 RLSILDQSEGAIIQDQEEVMDTKPDLLAFQRPTT-QRNPKGFGYVTFMHLNTLKQ--RQY 521
Query: 443 LMEDDTFV 450
+ D FV
Sbjct: 522 VKNDTLFV 529
>gi|47230748|emb|CAF99941.1| unnamed protein product [Tetraodon nigroviridis]
Length = 565
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/513 (24%), Positives = 216/513 (42%), Gaps = 114/513 (22%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++AI T CGH+FC CI+ I G+ CP+D ++L+K+ +F DN+
Sbjct: 75 LESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDAGQR-CPVDNEMLSKEQLFPDNF 133
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLK-----YSQPSVEDITDSPTSSF-- 125
+REIL + C C+S++ + E+H+ +C + Q SV+ +S
Sbjct: 134 AKREILSLIVRCSNPGCTSKMELRHLENHLASCEFATVPCPHCQQSVKKTLLEEHTSVQC 193
Query: 126 -RNTSGIP----------TNKRNSKILTVTVFPEHLNMQGSSNE------------NFPC 162
R P + + +V H +M + ++ C
Sbjct: 194 RRRPVSCPDCVEIFVYEEKERHEQQCPFASVMCPHCDMDLTRDQMESHCDTDCPKAPIAC 253
Query: 163 KFYQVGCREVFKSQAL---------LEKHY--DLKTSFHLELLFNKYCS----------- 200
F GC+E + L + HY D S +L K CS
Sbjct: 254 NFSLFGCKERMQRHDLARHMQDFTQMHMHYMADFLRSLNLNGTIPKSCSTIVHSVSFEDQ 313
Query: 201 ----------DGSQSTN-TPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
G+ S+N TP ++ +E++ L+K +L +NQ G
Sbjct: 314 GAAASASSCSKGALSSNCTPCQPTEEMQRLREMDRRLVKQDHQLRELIILKENQTGQ--- 370
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC 309
+ + +R+ +LE+SM E+E + C
Sbjct: 371 ----------------IAELRKRVSVLEESM-----------------RELES----QHC 393
Query: 310 NGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQ----YLSL 364
G+Y W++ +F L+ + + +S FY+ GY+ C R+++ AQ ++SL
Sbjct: 394 TGIYIWRLKDFSVLLRNQEAGLPVVEHSPGFYTGRPGYKLCLRLHLQSPVAQRCSNFISL 453
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK-NFDSFKRPVNFFLNKKA 423
F+H +QG D +L WPF G IR L+ E E+ K + +F+RP N K
Sbjct: 454 FVHTMQGAYDGLLTWPFQGTIRLAILDQGPEGQHHIEVMETKPDLQAFQRP-TIIRNPKG 512
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
FG+ F+ + + + R ++ +DD +I+ +VT
Sbjct: 513 FGYVTFLHLHHLKE--RAYV-KDDALLIRCEVT 542
>gi|326920354|ref|XP_003206439.1| PREDICTED: TNF receptor-associated factor 6-like [Meleagris
gallopavo]
Length = 524
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 208/457 (45%), Gaps = 33/457 (7%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC CI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP K C ++ + E H C + P + T
Sbjct: 123 AKREILSLTVKCPNKGCCMKMELRHLEEHQLHCDFTAVECPQCQGAFQKNHLKEHMTQEC 182
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + ++ E L+ Q N C++ C + Q + HYD +
Sbjct: 183 PRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEY----CNTMLIRQQ-MPNHYDNDCPT 237
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ ++ + C + Q H ++ T + A ++N + P N+ +
Sbjct: 238 APVPCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSIQNISVTATNPVPFINEVENF 297
Query: 248 KSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
K + + + + +L+ +M M E K + N E + + E +
Sbjct: 298 KETIQQLEGRLVRQDHQIRELI-AKMETQNTHMAELKRTIRNLEGKITEME-------AQ 349
Query: 308 LCNGVYFWKMYNFPAKLKEMKEINR--YFYSACFYSSCFGYRFCTRVNISREDAQ----Y 361
CNG+Y WK+ NF + L++ +E R +S FY+ GY+ C R++I +AQ +
Sbjct: 350 QCNGIYIWKIENF-SGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPNAQRCANF 408
Query: 362 LSLFIHLVQGENDDILDWPFVGRIRFTALNTS--SEFSITDEIQSDK-NFDSFKRPVNFF 418
+SLF+H +QGE D L WPF G IR + L+ S E +E+ K +F+RP
Sbjct: 409 ISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQRPT-IH 467
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N K FG+ F+ + + R F+ +DDT +++ +V
Sbjct: 468 RNPKGFGYVTFMHLQTLKQ--RTFV-KDDTLLVRCEV 501
>gi|115605763|gb|ABJ15863.1| TNF receptor-associated factor 6 [Gasterosteus aculeatus]
Length = 576
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 209/500 (41%), Gaps = 61/500 (12%)
Query: 5 PVANNKLNLDP----RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK 60
P+ + DP ++EC ICL L++AI T CGH+FC CI+ I G+ CP+D +
Sbjct: 64 PLQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDTGQR-CPVDNE 122
Query: 61 VLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDS 120
L +D +F DN+ +REIL + CP C+ ++ + E+H+ C + P +
Sbjct: 123 RLLEDQLFPDNFAKREILSLTVRCPNSDCADKMELRHLENHLGRCQFA-TVPCSQCQQAV 181
Query: 121 PTSSFRNTSGIPTNKR--NSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC----REVFK 174
S KR + + F E + C F V C E+ +
Sbjct: 182 RKSRLEEHQTAECQKRPVSCPDCVASFFYEERKLHQQR-----CPFAIVKCLFCDLELIR 236
Query: 175 SQALLEKHYDLK-TSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMK---- 228
Q +E H D + F+ + C + Q N H ++ T A ++
Sbjct: 237 DQ--IESHCDTDCPKAPIACNFSAFGCKESMQRHNLAQHMQEFTQMHMRYMAEFLRGLSL 294
Query: 229 NKEHESKLWDPNKNQAGDDKS-------------------SEGDCSCKTCGDNSHLLKLV 269
N LW P + +D+ S C+ + L+ +
Sbjct: 295 NGTTPKSLWAPAPSAYPEDQGATAALAAVCSGPRGAPSSMSSNSCAPSQPAEGMQRLREM 354
Query: 270 YERMVLLEQSMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPA 322
R+V + + E Q ++ + E+ + + C+G++ W++ F A
Sbjct: 355 DGRLVKQDHQLRELIILKETQAGQLAELRRRVSLLEDTVKELESQQCHGIFIWRLRGFSA 414
Query: 323 KLKEMKEINRYF-YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDIL 377
L+ + +S FY+ GY+ C R+++ +A ++SLF+H +QG D L
Sbjct: 415 HLRNQEAGQPVVEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNFISLFVHTMQGAFDGQL 474
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
WPF G IR L+ E E+ K + +F++P+ N K FG+ F+ + +
Sbjct: 475 SWPFQGTIRLAILDQGPEAQHHVEVMETKPDLQAFQKPL-IQRNPKGFGYVTFLHLHQLT 533
Query: 437 DPGRGFLMEDDTFVIKTQVT 456
R F+ +DDT +I+ +VT
Sbjct: 534 Q--RAFV-KDDTLLIRCEVT 550
>gi|304573444|gb|ADM45856.1| TNF receptor-associated factor 6 b [Cyprinus carpio]
Length = 543
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 206/470 (43%), Gaps = 39/470 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ T CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 66 LESKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQK-CPVDNEVLLEEQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ--PSVEDITDSPTSSFRNTSG 130
+REIL + CP CS ++ + + E H++ C Q +E + S ++
Sbjct: 125 AKREILSLTVRCPNVGCSDKMELRQLEKHLSQCKFATVQCPQCLESVRKSHLDEHKSEQC 184
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCR----EVFKSQALLEKHYD-L 185
+ +++T C F C E+ + Q L D L
Sbjct: 185 L------QRLMTCPACAGSFVYANKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCL 238
Query: 186 KTSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHES-KLWDPNKNQ 243
K + F+ + C H ++ T A ++++ S + +
Sbjct: 239 KAP--VACTFSTFGCHVKMPRNELAQHMQEFTQMHMRCMAEFLRSQTLSSCPVPSVAAHS 296
Query: 244 AGDDK--SSEGDCSCKTCGDNSHLLKLVYE---RMVLLEQSMLE-------QKIKVNNFE 291
A D++ S+ SC+ + +L + V E R+V +Q + E QK +V
Sbjct: 297 ASDERGASARAQDSCQCRQELMNLRETVLELEGRLVRQDQQIRELCIHNETQKNQVTELR 356
Query: 292 LNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCT 350
L E+ + + GVY W++ NF L+ + +S FY+ GY+ C
Sbjct: 357 RKLSSLEDATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCL 416
Query: 351 RVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK 406
R+++ A Y+SLF+H +QGE D L WP G IR L+ + +++
Sbjct: 417 RLHLQTPSAPRCSNYISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEGQHHVEVMETKP 476
Query: 407 NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+ +F+RP N K FG+ F+ + + RGF+ E D +++ +VT
Sbjct: 477 DLQAFQRP-TVQRNPKGFGYVTFLHLQALRQ--RGFVKE-DVLLVRCEVT 522
>gi|304573442|gb|ADM45855.1| TNF receptor-associated factor 6 b [Cyprinus carpio]
Length = 543
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 206/470 (43%), Gaps = 39/470 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ T CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 66 LESKYECPICLMGLRSAVQTPCGHRFCNSCIKKSIRDTGQK-CPVDNEVLLEEQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ--PSVEDITDSPTSSFRNTSG 130
+REIL + CP CS ++ + + E H++ C Q +E + S ++
Sbjct: 125 AKREILSLTVRCPNVGCSDKMELRQLEKHLSQCKFATVQCPQCLESVRKSHLDEHKSEQC 184
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCR----EVFKSQALLEKHYD-L 185
+ +++T C F C E+ + Q L D L
Sbjct: 185 L------QRLMTCPACAGSFVYANKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCL 238
Query: 186 KTSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHES-KLWDPNKNQ 243
K + F+ + C H ++ T A ++++ S + +
Sbjct: 239 KAP--VACTFSTFGCHVKMPRNELAQHMQEFTQMHMRCMAEFLRSQTLSSCPVPSVAAHS 296
Query: 244 AGDDK--SSEGDCSCKTCGDNSHLLKLVYE---RMVLLEQSMLE-------QKIKVNNFE 291
A D++ S+ SC+ + +L + V E R+V +Q + E QK +V
Sbjct: 297 ASDERGASARAQDSCQCRQELMNLRETVLELEGRLVRQDQQIRELCIHSETQKNQVTELR 356
Query: 292 LNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCT 350
L E+ + + GVY W++ NF L+ + +S FY+ GY+ C
Sbjct: 357 RKLSSLEDATRELEAQQYQGVYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCL 416
Query: 351 RVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK 406
R+++ A Y+SLF+H +QGE D L WP G IR L+ + +++
Sbjct: 417 RLHLQTPSAPRCSNYISLFVHTMQGEFDSQLPWPLQGTIRLAVLDQVEGQHHVEVMETKP 476
Query: 407 NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+ +F+RP N K FG+ F+ + + RGF+ E D +++ +VT
Sbjct: 477 DLQAFQRP-TVQRNPKGFGYVTFLHLQALRQ--RGFVKE-DVLLVRCEVT 522
>gi|307193327|gb|EFN76189.1| TNF receptor-associated factor 6 [Harpegnathos saltator]
Length = 370
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 132/231 (57%), Gaps = 21/231 (9%)
Query: 233 ESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFEL 292
ESKLWDP + + EG + LLK +YER+V+LEQ E I V+N +
Sbjct: 142 ESKLWDPPPKRETEVSEREGPPP-----NWELLLKNLYERLVILEQENRELTITVSNQKK 196
Query: 293 NLKQTEEI----EDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN---RYFYSACFYSSCFG 345
L + ++ + L+ CNGVY W++ +F KL M IN + FYS FY+ G
Sbjct: 197 QLTTLQTSVCFNQEEMYLRNCNGVYVWRLKSFQEKLTAM--INDPLKMFYSPGFYTGSNG 254
Query: 346 YRFCTRVNISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQS 404
Y+ C R+N+S D+ YLSL +H+++ ENDD LDWPF G + F ++ +SE +I + S
Sbjct: 255 YKICARINVSSRDSNYLSLLLHIMKSENDDALDWPFYGTMCFVLVHPRNSENNIREITSS 314
Query: 405 DKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ ++F+RP LNK++FG+ F+R+ DV+D ++ D+ V + +V
Sbjct: 315 RPDLEAFRRPT-CELNKRSFGYTEFVRLNDVID-----FVQHDSLVFRIEV 359
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFI 69
+NL+PRFEC ICL +L+D +LTSCGHKFC+ CI +W+ +G CP+D + L +++D+F
Sbjct: 24 VNLEPRFECPICLTWLRDPVLTSCGHKFCSQCIHTWLQKEGA-CCPVDSRPLKSENDLFR 82
Query: 70 DNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLK 108
D YT REI + CPY+Q C +LS + E+H++ C K
Sbjct: 83 DLYTSREISQQRTNCPYQQFGCQVELSPVDMETHISQCTYK 123
>gi|89886034|ref|NP_001008162.2| TNF receptor-associated factor 6 [Xenopus (Silurana) tropicalis]
gi|123907325|sp|Q28DL4.1|TRAF6_XENTR RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|89273399|emb|CAJ82470.1| TNF receptor-associated factor 6 [Xenopus (Silurana) tropicalis]
Length = 558
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 221/500 (44%), Gaps = 85/500 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D + L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHK-CPVDNESLMENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-------------YLKYSQ-------- 111
+REIL + CP + C+ + + E H+ C + KYS
Sbjct: 125 AKREILSLRVKCPSQGCTETMELRHLERHLVRCDFAGVECSQCQSSFPKYSLQKHKFEEC 184
Query: 112 PSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTV-----------FPEHLNMQGSSNENF 160
P + ++ + + + + + VT P H +M +
Sbjct: 185 PRRQIFCENCAVAMALEDKL-NHDQTCPLAYVTCEYCQTNLIREQMPAHYSMD-CTMAPI 242
Query: 161 PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQK 220
PC +Y+ GC E + L +H T H+ ++ +Q+ + S TS+
Sbjct: 243 PCMYYEFGCTEKMQRNDL-ARHLQEFTQAHMRMM--------AQTLRSFSSSVTPTSHMP 293
Query: 221 EIEAYLMKNKEHESKLWDPNKNQAGDDK---------SSEGDCSCKTCGDNSHLLKLVYE 271
+I DP++ + S+ DC+ +T + ++ +
Sbjct: 294 DI------------SFCDPSQFEPAPPSVATVHSTHTPSQNDCTQET-RNLRETIEQLEG 340
Query: 272 RMVLLEQSMLEQKIKVNN---FELNLKQTEEIEDNVVLKL----CNGVYFWKMYNFPAKL 324
R+V + + E K+ + LK T DN + ++ C+G++ W++ NF + L
Sbjct: 341 RLVRQDHQIRELIAKMETQCTYVNELKHTIRSLDNRLGEMESQQCSGIFIWRINNFNSLL 400
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDW 379
K +E +S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L W
Sbjct: 401 KNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPW 460
Query: 380 PFVGRIRFTALNTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
P G IR + L+ S ++ D+ + + +F+RP N K FG+ F+ + +
Sbjct: 461 PLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPT-VARNPKGFGYVTFMHLQALK 519
Query: 437 DPGRGFLMEDDTFVIKTQVT 456
R ++ ++DT +++ VT
Sbjct: 520 Q--RQYV-KNDTLLVRCSVT 536
>gi|51950093|gb|AAH82342.1| TNF receptor-associated factor 6 [Xenopus (Silurana) tropicalis]
Length = 558
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 221/500 (44%), Gaps = 85/500 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D + L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHK-CPVDNESLMENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-------------YLKYSQ-------- 111
+REIL + CP + C+ + + E H+ C + KYS
Sbjct: 125 AKREILSLRVKCPSQGCTETMELRHLERHLVRCDFAGVECSQCQSSFPKYSLQKHKFEEC 184
Query: 112 PSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTV-----------FPEHLNMQGSSNENF 160
P + ++ + + + + + VT P H +M +
Sbjct: 185 PRRQIFCENCALAMALEDKL-NHDQTCPLAYVTCEYCQTNLIREQMPAHYSMD-CTMAPI 242
Query: 161 PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQK 220
PC +Y+ GC E + L +H T H+ ++ +Q+ + S TS+
Sbjct: 243 PCMYYEFGCTEKMQRNDL-ARHLQEFTQAHMRMM--------AQTLRSFSSSVTPTSHMP 293
Query: 221 EIEAYLMKNKEHESKLWDPNKNQAGDDK---------SSEGDCSCKTCGDNSHLLKLVYE 271
+I DP++ + S+ DC+ +T + ++ +
Sbjct: 294 DI------------SFCDPSQFEPAPPSVATVHSSHTPSQNDCTQET-RNLRETIEQLEG 340
Query: 272 RMVLLEQSMLEQKIKVNN---FELNLKQTEEIEDNVVLKL----CNGVYFWKMYNFPAKL 324
R+V + + E K+ + LK T DN + ++ C+G++ W++ NF + L
Sbjct: 341 RLVRQDHQIRELIAKMETQCTYVNELKHTIRSLDNRLGEMESQQCSGIFIWRINNFNSLL 400
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDW 379
K +E +S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L W
Sbjct: 401 KNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPW 460
Query: 380 PFVGRIRFTALNTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
P G IR + L+ S ++ D+ + + +F+RP N K FG+ F+ + +
Sbjct: 461 PLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPT-VARNPKGFGYVTFMHLQALK 519
Query: 437 DPGRGFLMEDDTFVIKTQVT 456
R ++ ++DT +++ VT
Sbjct: 520 Q--RQYV-KNDTLLVRCSVT 536
>gi|156405633|ref|XP_001640836.1| predicted protein [Nematostella vectensis]
gi|156227972|gb|EDO48773.1| predicted protein [Nematostella vectensis]
Length = 482
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 222/463 (47%), Gaps = 52/463 (11%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+D + T CGH+FC CI I G CP+D L++ +++ DN+
Sbjct: 52 LESKYECPICLLGLRDPVQTPCGHRFCFNCIRRSIRDAGPK-CPVDNTPLSERELYRDNF 110
Query: 73 TRREILENNLTCPYKQ---CSSQLSIPEYESHVNTCYLKYSQPSVE--------DITDSP 121
+RE++ + C K+ C+ + ++ E E H+ C + E ++
Sbjct: 111 AKREMMSFIVWCRLKKERGCTWKGALKELEEHLKGCPCMDTNCPNECGAVMQRKEVDKHC 170
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEK 181
+ N S +P + K+ T++ EHL + N P + C V + + +
Sbjct: 171 AEACPNRS-VPCDHCKMKV-TISKIEEHLKGCPCMDTNCPNE-----CGAVMQRKEV--- 220
Query: 182 HYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNK 241
+K+C++ + + P + S++++ ++ HE++L
Sbjct: 221 --------------DKHCAEACPNRSVPCDHCKMKSSKEQASHGPQEHTPHEAELRREAL 266
Query: 242 NQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIE 301
Q+ + + + GD ER V ++ +++I +L +T EIE
Sbjct: 267 FQSANMQREVDMLGSR--GDEYRQFLAYLERKVEDVKTSSDRRIAELTHKLMRLETREIE 324
Query: 302 DNVVLKLCNGVYFWKMYNF-PAKLKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDA- 359
+ ++CNG + WK+ NF + + + +S FY+S +GY+ C R+N++ D
Sbjct: 325 --LEGRVCNGTFIWKLDNFRQCREGSIAGLTAAIHSPPFYTSMYGYKMCLRMNLNGVDGG 382
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKR 413
+++SLFIH++QG+ D IL+WPF+GRI + L+ S S I++ + + N +F+R
Sbjct: 383 LGEHVSLFIHMMQGDWDGILEWPFIGRITLSILDQSDQIDSRRPISETLVAKPNLLAFQR 442
Query: 414 PVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
P + N K +G+ F + + + G +++++ +++ Q++
Sbjct: 443 PTS-PRNHKGYGYVEFCPIDQLTE---GQYIKNNSILVRIQIS 481
>gi|355566601|gb|EHH22980.1| TNF receptor-associated factor 6 [Macaca mulatta]
Length = 538
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 209/484 (43%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 80 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 138
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 139 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDC 198
Query: 121 PTS--SFRNTSGIPT------NKRNSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S N + + + +N + V P H ++ + P
Sbjct: 199 PRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 257
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 258 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-LIPDSGYVSE 307
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 308 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSTYVS 344
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 345 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 397
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 398 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 456
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K + +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 457 PVRQNHEEIMDAKPDLLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 512
Query: 453 TQVT 456
+V+
Sbjct: 513 CEVS 516
>gi|402893800|ref|XP_003910074.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Papio
anubis]
gi|402893802|ref|XP_003910075.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Papio
anubis]
gi|288559146|sp|B6CJY4.1|TRAF6_CERTO RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|164652826|gb|ABY64982.1| TNF receptor-associated factor 6 [Cercocebus atys]
Length = 522
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 210/484 (43%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDC 182
Query: 121 PTS--SFRNTSGIPT------NKRNSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S N + + + +N + V P H ++ + P
Sbjct: 183 PRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-LIPDSGYVSE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSTYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K + +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPDLLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>gi|209447040|ref|NP_001129268.1| TNF receptor-associated factor 6 [Macaca mulatta]
gi|288559147|sp|B6CJY5.1|TRAF6_MACMU RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|164652828|gb|ABY64983.1| TNF receptor-associated factor 6 [Macaca mulatta]
gi|380788709|gb|AFE66230.1| TNF receptor-associated factor 6 [Macaca mulatta]
gi|383413385|gb|AFH29906.1| TNF receptor-associated factor 6 [Macaca mulatta]
Length = 522
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 210/484 (43%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDC 182
Query: 121 PTS--SFRNTSGIPT------NKRNSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S N + + + +N + V P H ++ + P
Sbjct: 183 PRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-LIPDSGYVSE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSTYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K + +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPDLLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>gi|4759254|ref|NP_004611.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|22027630|ref|NP_665802.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|30580642|sp|Q9Y4K3.1|TRAF6_HUMAN RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6; AltName:
Full=Interleukin-1 signal transducer; AltName: Full=RING
finger protein 85
gi|1732426|gb|AAB38751.1| putative interleukin 1 signal transducer [Homo sapiens]
gi|28372409|gb|AAO38054.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|119588525|gb|EAW68119.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|119588526|gb|EAW68120.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|119588528|gb|EAW68122.1| TNF receptor-associated factor 6, isoform CRA_a [Homo sapiens]
gi|158259417|dbj|BAF85667.1| unnamed protein product [Homo sapiens]
gi|168278030|dbj|BAG10993.1| TNF receptor-associated factor 6 [synthetic construct]
Length = 522
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 205/484 (42%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K IL P H ++ + P
Sbjct: 183 PRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-VIPDSGYISE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSMYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>gi|21410269|gb|AAH31052.1| TNF receptor-associated factor 6 [Homo sapiens]
gi|123980612|gb|ABM82135.1| TNF receptor-associated factor 6 [synthetic construct]
gi|123995433|gb|ABM85318.1| TNF receptor-associated factor 6 [synthetic construct]
Length = 522
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 205/484 (42%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K IL P H ++ + P
Sbjct: 183 PRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-VIPDSGYISE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSMYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>gi|114637057|ref|XP_001154136.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pan
troglodytes]
gi|297688920|ref|XP_002821919.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Pongo
abelii]
gi|297688922|ref|XP_002821920.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pongo
abelii]
gi|397520606|ref|XP_003830405.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Pan
paniscus]
gi|397520608|ref|XP_003830406.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Pan
paniscus]
gi|410219122|gb|JAA06780.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410266204|gb|JAA21068.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410294410|gb|JAA25805.1| TNF receptor-associated factor 6 [Pan troglodytes]
gi|410349181|gb|JAA41194.1| TNF receptor-associated factor 6 [Pan troglodytes]
Length = 522
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 205/484 (42%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K IL P H ++ + P
Sbjct: 183 PRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-LIPDSGYISE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSMYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>gi|332210765|ref|XP_003254483.1| PREDICTED: TNF receptor-associated factor 6 isoform 1 [Nomascus
leucogenys]
gi|332210767|ref|XP_003254484.1| PREDICTED: TNF receptor-associated factor 6 isoform 2 [Nomascus
leucogenys]
Length = 522
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 205/484 (42%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCHRPFQKFHINIHILKDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K IL P H ++ + P
Sbjct: 183 PRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-LIPDSGYISE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSMYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>gi|113674095|ref|NP_001038217.1| TNF receptor-associated factor 6 [Danio rerio]
gi|288559206|sp|Q6IWL4.2|TRAF6_DANRE RecName: Full=TNF receptor-associated factor 6; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|213625859|gb|AAI71483.1| TNF receptor-associated factor 6 [Danio rerio]
gi|213627514|gb|AAI71487.1| TNF receptor-associated factor 6 [Danio rerio]
Length = 542
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 201/490 (41%), Gaps = 79/490 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ T CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 65 LESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQK-CPVDNEVLLEEQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY-------------------SQPS 113
+REIL + C CS ++ + + E H++ C SQ
Sbjct: 124 AKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHC 183
Query: 114 VEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNE------------NFP 161
++ I P + + N TV E+ M+ ++
Sbjct: 184 LQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVC-EYCEMELIRDQLALHCDTDCLKAPVA 242
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GCRE ++ L +H T H+ + S + PS +S+ +
Sbjct: 243 CTFSTFGCREKM-TRNELAQHMQEFTQMHMRYMAEFLRSQTLNNCTMPSAAAHLSSDDR- 300
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE---RMVLLEQ 278
G S C CK + +L + V E R+V +Q
Sbjct: 301 -----------------------GASARSPDSCQCKQ--ELLNLRETVLELEGRLVRQDQ 335
Query: 279 SMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN 331
+ E QK +V L EE + + G+Y W++ NF L+ +
Sbjct: 336 QIRELCIHNDTQKNQVTELRRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRNQEAGQ 395
Query: 332 R-YFYSACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIR 386
+S FY+ GY+ C R+++ A ++SLF+H +QGE D L WP G IR
Sbjct: 396 PIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIR 455
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
L+ + +++ + +F+RP N K FG+ F+ + + RGF+ E
Sbjct: 456 LAVLDQVEGQHHIEVMETKPDLQAFQRP-TVMRNPKGFGYVTFLHLQALRQ--RGFVKE- 511
Query: 447 DTFVIKTQVT 456
D +++ +VT
Sbjct: 512 DVLLVRCEVT 521
>gi|118091500|ref|XP_421089.2| PREDICTED: TNF receptor-associated factor 6 [Gallus gallus]
Length = 524
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 207/457 (45%), Gaps = 33/457 (7%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC CI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP K C ++ + E H C + P + T
Sbjct: 123 AKREILSLTVKCPNKGCCLKMELRHLEEHQLHCDFTTVECPQCQGAFQKNHLKEHMTQEC 182
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + ++ E L+ Q N C++ C + Q + HYD +
Sbjct: 183 PRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEY----CNTMLIRQQ-MPNHYDNDCPT 237
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ ++ + C + Q H ++ T + A ++N + P N+ +
Sbjct: 238 APVPCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSIQNISVTATNPVPFINEVENF 297
Query: 248 KSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
K + + + + +L+ +M M E K + + E + + E +
Sbjct: 298 KETIQQLEGRLVRQDHQIRELI-AKMETQNTHMAELKRTIRDLEGKITEMEA-------Q 349
Query: 308 LCNGVYFWKMYNFPAKLKEMKEINR--YFYSACFYSSCFGYRFCTRVNISREDAQ----Y 361
CNG+Y WK+ NF + L++ +E R +S FY+ GY+ C R++I AQ +
Sbjct: 350 QCNGIYIWKIENF-SGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPSAQRCANF 408
Query: 362 LSLFIHLVQGENDDILDWPFVGRIRFTALNTS--SEFSITDEIQSDK-NFDSFKRPVNFF 418
+SLF+H +QGE D L WPF G IR + L+ S E +E+ K +F+RP
Sbjct: 409 ISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQRPT-IH 467
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N K FG+ F+ + + R F+ +DDT +++ +V
Sbjct: 468 RNPKGFGYVTFMHLQTLKQ--RTFV-KDDTLLVRCEV 501
>gi|47716905|gb|AAT37634.1| TNF-receptor associated factor 6 [Danio rerio]
Length = 542
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 206/477 (43%), Gaps = 53/477 (11%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ T CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 65 LESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQK-CPVDNEVLLEEQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
+REIL + C CS ++ + + E H++ C + P + P S
Sbjct: 124 AKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATA-PCPQCQESVPMSHLDE----- 177
Query: 133 TNKRNSKILTVTVFPEHLNMQGS-------SNENFPCKFYQVGCR----EVFKSQALLEK 181
+K + + P + GS S+E F C F C E+ + Q L
Sbjct: 178 -HKSQHCLQRIMTCP---DCAGSFVYAVKQSHEQF-CPFANTVCEYCEMELIRDQLALHC 232
Query: 182 HYD-LKTSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMK-----NKEHES 234
D LK + F+ + C + H ++ T A ++ N S
Sbjct: 233 DTDCLKAP--VACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFLRSQTLNNCTMPS 290
Query: 235 KLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE---RMVLLEQSMLE-------QK 284
+ + G S C CK + +L + V E R+V +Q + E QK
Sbjct: 291 AAAHSSSDDRGASARSPDSCQCKQ--ELLNLRETVLELEGRLVRQDQQIRELCIHNDTQK 348
Query: 285 IKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSC 343
+V L EE + + G+Y W++ NF L+ + +S FY+
Sbjct: 349 NQVTELRRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRNQEAGQPIVLHSPPFYTGR 408
Query: 344 FGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT 399
GY+ C R+++ A ++SLF+H +QGE D L WP G IR L+
Sbjct: 409 PGYKLCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEGQHHI 468
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+ +++ + +F+RP N K FG+ F+ + + RGF+ E D +++ +VT
Sbjct: 469 EVMETKPDLQAFQRP-TVMRNPKGFGYVTFLHLQALRQ--RGFVKE-DVLLVRCEVT 521
>gi|32766399|gb|AAH55214.1| TNF receptor-associated factor 6 [Danio rerio]
Length = 542
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 200/490 (40%), Gaps = 79/490 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 65 LESKYECPICLMGLRSAVQAPCGHRFCDSCIRKSIRDTGQK-CPVDNEVLLEEQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY-------------------SQPS 113
+REIL + C CS ++ + + E H++ C SQ
Sbjct: 124 AKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHC 183
Query: 114 VEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNE------------NFP 161
++ I P + + N TV E+ M+ ++
Sbjct: 184 LQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVC-EYCEMELIRDQLALHCDTDCLKAPVA 242
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GCRE ++ L +H T H+ + S + PS +S+ +
Sbjct: 243 CTFSTFGCREKM-TRNELAQHMQEFTQMHMRYMAEFLRSQTLNNCTMPSAAAHSSSDDR- 300
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE---RMVLLEQ 278
G S C CK + +L + V E R+V +Q
Sbjct: 301 -----------------------GASARSPDSCQCKQ--ELLNLRETVLELEGRLVRQDQ 335
Query: 279 SMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN 331
+ E QK +V L EE + + G+Y W++ NF L+ +
Sbjct: 336 QIRELCIHNDTQKNQVTELRRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRNQEAGQ 395
Query: 332 R-YFYSACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIR 386
+S FY+ GY+ C R+++ A ++SLF+H +QGE D L WP G IR
Sbjct: 396 PIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIR 455
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
L+ + +++ + +F+RP N K FG+ F+ + + RGF+ E
Sbjct: 456 LAVLDQVEGQHHIEVMETKPDLQAFQRP-TVMRNPKGFGYVTFLHLQALRQ--RGFVKE- 511
Query: 447 DTFVIKTQVT 456
D +++ +VT
Sbjct: 512 DVLLVRCEVT 521
>gi|355752210|gb|EHH56330.1| TNF receptor-associated factor 6 [Macaca fascicularis]
Length = 538
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 211/484 (43%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D+++L ++ +F D++
Sbjct: 80 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDDEILLENKLFPDSF 138
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 139 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDC 198
Query: 121 PTS--SFRNTSGIPT------NKRNSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S N + + + +N + V P H ++ + P
Sbjct: 199 PRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 257
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 258 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-LIPDSGYVSE 307
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 308 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSTYVS 344
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 345 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 397
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 398 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 456
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K + +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 457 PVRQNHEEIMDAKPDLLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 512
Query: 453 TQVT 456
+V+
Sbjct: 513 CEVS 516
>gi|332021684|gb|EGI62040.1| TNF receptor-associated factor 6 [Acromyrmex echinatior]
Length = 358
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 131/233 (56%), Gaps = 26/233 (11%)
Query: 233 ESKLWDP---NKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNN 289
ESKLWDP N+ Q D + D LLK +YER+V+LEQ E I V+N
Sbjct: 142 ESKLWDPPLKNRIQVADKEEPSPDWQ--------QLLKNLYERIVVLEQENRELSITVSN 193
Query: 290 FELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEM-KEINRYFYSACFYSSCFGYRF 348
+ L + L+ CNGVY W++ +F KL M + + FYS FY+S GY+
Sbjct: 194 QKNQLAA-------MCLQNCNGVYIWRLKSFQEKLNAMTNDPQKMFYSPGFYTSPNGYKI 246
Query: 349 CTRVNISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKN 407
C R+NIS ++ YLS +H+++ ENDD LDWPF G + F ++ +SE +I ++ S +
Sbjct: 247 CARINISSKNPDYLSFLLHIMKSENDDALDWPFNGTMFFALVHPQNSEKNIYEKTSSIPD 306
Query: 408 FDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMTH 460
++F++P LNK++FG+ FI V D+ D ++ DT + K +V +++
Sbjct: 307 LEAFQKPT-CELNKRSFGYTEFICVRDITD-----FLQHDTLIFKIEVYPISY 353
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 76/117 (64%), Gaps = 5/117 (4%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
N K ++PRFEC ICL +L+D +LTSCGHKFC+ CI +W+ +G CP+D + L +++
Sbjct: 23 NIKGYVEPRFECPICLTWLRDPVLTSCGHKFCSHCIYTWLKKEGA-CCPVDSRPLKSENL 81
Query: 68 FIDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLK--YSQPSVEDITDS 120
F D YT REI + +C Y+Q C +LS + E+H+ C K S+P V++ T++
Sbjct: 82 FPDLYTTREISQKRTSCIYQQFGCQVKLSPVDMETHIIQCTYKQDISEPRVQNGTNA 138
>gi|123916477|sp|Q3MV19.1|TRF6A_XENLA RecName: Full=TNF receptor-associated factor 6-A; AltName: Full=E3
ubiquitin-protein ligase TRAF6
gi|75674194|dbj|BAE44508.1| TRAF6 [Xenopus laevis]
Length = 556
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 214/493 (43%), Gaps = 75/493 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI + G + CP+D ++L + +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAG-HKCPVDNEILMEKQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-------------YLKYSQPSVEDITD 119
+REIL + CP C+ + + E H+ C +LK +
Sbjct: 125 AKREILSLRVKCPNLGCTDTMELRHLEHHLVQCQFASVECSQCQGSFLKLLLDKHMEHEC 184
Query: 120 SPTSSFRNTSGIPT---NKRNSKILTVTVF---------------PEHLNMQGSSNENFP 161
+F + G+ +K +++ + P H +M + P
Sbjct: 185 GRRRTFCDNCGLAMAYEDKSGHELICPMAYVTCDYCQTNLIREQMPAHYSMD-CTMAPIP 243
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTS---- 217
C + + GCRE + L D T H+ ++ S + TP+ D S
Sbjct: 244 CMYCEFGCREKMQRHNLAGHLQDF-TQAHMRMMAQTLRS----FSTTPTSHISDISFCDP 298
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLE 277
NQ E L H S + S+ DCS +T + ++ + R+V +
Sbjct: 299 NQFE-PVPLSVAPAHPSHM------------PSQQDCSQET-RNLRETVEQLEGRLVRQD 344
Query: 278 QSMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+ E Q VN + + E+ ++ CNGV+ W++ F K +E
Sbjct: 345 HQIRELIAKMETQCTYVNELKHTIHSLEDKVADMDAHRCNGVFIWRIKGFSGLQKSQEEE 404
Query: 331 NR-YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRI 385
+S FY+ GY+ C R+++ AQ Y+SLF+H +QG+ D +L WP G I
Sbjct: 405 KPVVIHSPGFYTGDPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGDYDSLLPWPLQGTI 464
Query: 386 RFTALNTSSEFSITDEIQ---SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGF 442
R + L+ S + D+++ + + +F+RP N K FG+ F+ + + R +
Sbjct: 465 RLSILDQSESTARQDQVEVMDTKPDLLAFQRPTA-PRNPKGFGYVTFMHLNTLKQ--RQY 521
Query: 443 LMEDDTFVIKTQV 455
+ ++DT +++ V
Sbjct: 522 V-KNDTLLVRCSV 533
>gi|148229449|ref|NP_001089863.1| TNF receptor-associated factor 6-A [Xenopus laevis]
gi|80477229|gb|AAI08563.1| MGC131035 protein [Xenopus laevis]
Length = 556
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 214/493 (43%), Gaps = 75/493 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI + G + CP+D ++L + +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAG-HKCPVDNEILMEKQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-------------YLKYSQPSVEDITD 119
+REIL + CP C+ + + E H+ C +LK +
Sbjct: 125 AKREILSLRVKCPNLGCTDTMELRHLEHHLVQCQFASIECSQCQGSFLKLLLDKHMEHEC 184
Query: 120 SPTSSFRNTSGIPT---NKRNSKILTVTVF---------------PEHLNMQGSSNENFP 161
+F + G+ +K +++ + P H +M + P
Sbjct: 185 GRRRTFCDNCGLAMAYEDKSGHELICPMAYVTCDYCQTNLIREQMPAHYSMD-CTMAPIP 243
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTS---- 217
C + + GCRE + L D T H+ ++ S + TP+ D S
Sbjct: 244 CMYCEFGCREKMQRHNLAGHLQDF-TQAHMRMMAQTLRS----FSTTPTSHISDISFCDP 298
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLE 277
NQ E L H S + S+ DCS +T + ++ + R+V +
Sbjct: 299 NQFE-PVPLSVAPAHPSHM------------PSQQDCSQET-RNLRETVEQLEGRLVRQD 344
Query: 278 QSMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+ E Q VN + + E+ ++ CNGV+ W++ F K +E
Sbjct: 345 HQIRELIAKMETQCTYVNELKHTIHSLEDKVADMDAHRCNGVFIWRIKGFSGLQKSQEEE 404
Query: 331 NR-YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRI 385
+S FY+ GY+ C R+++ AQ Y+SLF+H +QG+ D +L WP G I
Sbjct: 405 KPVVIHSPGFYTGDPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGDYDSLLPWPLQGTI 464
Query: 386 RFTALNTSSEFSITDEIQ---SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGF 442
R + L+ S + D+++ + + +F+RP N K FG+ F+ + + R +
Sbjct: 465 RLSILDQSESTARQDQVEVMDTKPDLLAFQRPTA-PRNPKGFGYVTFMHLNTLKQ--RQY 521
Query: 443 LMEDDTFVIKTQV 455
+ ++DT +++ V
Sbjct: 522 V-KNDTLLVRCSV 533
>gi|195355829|ref|XP_002044390.1| GM11204 [Drosophila sechellia]
gi|194130708|gb|EDW52751.1| GM11204 [Drosophila sechellia]
Length = 468
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 189/456 (41%), Gaps = 101/456 (22%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDN 71
LD R+EC+I +++L + +LTSC K CP+D K L+ + DIF DN
Sbjct: 98 LDSRYECAIWIDWLNEPVLTSCAASPPGM-------QKNNQCCPMDNKRLSAEHDIFPDN 150
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNT 128
YTRREI + CP CS S E H+ +C Y + +P E
Sbjct: 151 YTRREIEQLKRDCPNSSLGCSVVASPIELHRHLPSCPYRRQQEPQEEK------------ 198
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKT 187
C F ++ C V + + LE+H
Sbjct: 199 ---------------------------------CPFAKIKCDFVGRPETNQLEEHLKADM 225
Query: 188 SFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNK-NQAGD 246
H++L+ + Q T + W P+K + +G
Sbjct: 226 PHHMQLMLQAF-----QQTAIAT--------------------------WQPHKPSTSGA 254
Query: 247 DKSSEGDCSCKTC-----GDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIE 301
++ G G + +++ +Y+R+V+LEQ EQ+ ++ N + L+ + +
Sbjct: 255 MENGHGQQQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENMQKQLRLARQ-Q 313
Query: 302 DNVVLKLCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQ 360
V + NG W++ A + ++ N YS Y+S GY+FC R+NI
Sbjct: 314 APVDPRYSNGTIVWRIEQLGALVARLRANANNQVYSHECYTSPHGYKFCARLNIQPRKPH 373
Query: 361 YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFL 419
LSL +HL+Q END LDWPF GRI+ ++ + + S D I + +F +P +
Sbjct: 374 VLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPADATLSQHDTIMTKPEILAFHKPRE-AI 432
Query: 420 NKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ + FGF + +++++ G DD +IK ++
Sbjct: 433 STRGFGFLEYANISNIIQLG---FCADDRLLIKIEI 465
>gi|443720364|gb|ELU10162.1| hypothetical protein CAPTEDRAFT_167590 [Capitella teleta]
Length = 502
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 211/491 (42%), Gaps = 75/491 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+D R+EC ICL ++ + TSCGH++C ACI +WI + CP L +F D
Sbjct: 30 VDKRYECPICLLVQRNPVQTSCGHRYCRACIYAWI--RESPLCPTCNSALGTSKMFTDLI 87
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
REI+ + C + C+ + ESH C + V P R + +
Sbjct: 88 AEREIMSLRVKCSNEGCTQTFELANSESHNEKCLFRL----VPCPNGCPNLLRRRS--LD 141
Query: 133 TNKRNSKILTVTV------------FPEHLN---------------MQGS---------- 155
+ N +L V V P+HLN +Q S
Sbjct: 142 NHMANLCLLRVKVCEHCSEEVKAEDLPDHLNKCRELQISCELCGCRVQRSELMSHRESVC 201
Query: 156 SNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
+ PC + + GC E + Q L HY HL+L+ + S R
Sbjct: 202 AKVIIPCCYSRFGCTERMQRQNL-PSHYAACVHEHLQLV-------SQHVSILESQMRPS 253
Query: 216 TSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLL-KLVYERMV 274
++ + A L + +S + K++ + + S L +LV +
Sbjct: 254 VASHRPASARLPQQLSFDSPYVTSDLIDTDPIKTAAPGGTAALLNEASDLAAQLVDAKRT 313
Query: 275 L--LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF-PAKLKEMKEIN 331
+ L ++ +Q K+++ E +++ + + CNGV++W++ N+ K ++
Sbjct: 314 IERLTSTVQQQTQKISSLERKIREIDG-------RHCNGVFYWQVNNYMDYKQTLLQGST 366
Query: 332 RYFYSACFYSSCFGYRFCTRVN---ISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFT 388
+S FYSS +GY+ C R+N I + ++S+F+H ++GEND +L WPF G+I +
Sbjct: 367 PVLHSPGFYSSFYGYKMCIRLNPNGIEQGSGTHVSVFLHFMKGENDALLRWPFKGKIVLS 426
Query: 389 ALNTSS----EFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLM 444
L+ S + I D + S + +F+RP + N K FG+ F ++ + +G +
Sbjct: 427 ILDLISPDGCQQHIVDFLSSKPDLAAFRRPTS-NRNHKGFGYLEFAPISVI---EKGNYV 482
Query: 445 EDDTFVIKTQV 455
+D+T V+K +
Sbjct: 483 KDNTLVVKAVI 493
>gi|63034003|gb|AAY27978.1| tumor necrosis factor receptor associated factor 6 [Euprymna
scolopes]
Length = 555
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 230/546 (42%), Gaps = 117/546 (21%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR- 74
R+EC ICL L+D + T CGH+FC CI+ WI+ GK CPID LT +F DN+ +
Sbjct: 17 RYECPICLLILRDPMQTVCGHRFCKCCIERWIN-DGKGKCPIDNSDLTDGQMFPDNFAKR 75
Query: 75 ----------------------REILENNLTCPYK------QCSSQLSIPEYESHVN--- 103
+ I E+ +CPY C SQL + + H+
Sbjct: 76 EILSMKVRCPNRKSGCNTCLELKHIEEHAESCPYHYQFCPNNCLSQLLRKDLDDHLQEQC 135
Query: 104 ---TCYLKYSQPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENF 160
+ + + S+ + +P + ++ + EH+ +
Sbjct: 136 SKRSVLCSFCEESMLFESYGEHEIICPARMVPCDLCKEDVMREKI-AEHV-ATTCPHATV 193
Query: 161 PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYC-----SDGSQSTNTPSHGRQD 215
C F+ +GC + K + + EKH HL+L+ + + ++ + G
Sbjct: 194 KCCFFLLGCHKEIKREKM-EKHMKSHVQKHLQLMCCAFVKLLNFQNIESILSSRTSGNTS 252
Query: 216 TSNQKE-----------IEAYLMKNKEHESKLWD-----------PN-----------KN 242
T NQ E + A L + S + D PN K
Sbjct: 253 TQNQTESIHDPIEISGDLTALLQTAEGAASGVADGAPWRVPRVTLPNVRSLSIAGPTTKP 312
Query: 243 QAGDDKSSEGDCSCKTCGDNSHLL-----KLVYERMVLLEQSM-------LEQKIKVNNF 290
+ +SEG + G +S L + + ER ++S+ LE + K NN
Sbjct: 313 PPIERSTSEGKSTNLADGASSSELFDTEFQSLKERNTYQDESLARHSHELLELQYKYNNL 372
Query: 291 ELNLK----QTEEIED------NVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACF 339
E N K + +ED ++ +LCNG++ WK+ N+ + +E + +S F
Sbjct: 373 ERNHKDLRQKMRALEDKINSLSDIEGRLCNGLFVWKIKNYLQRRREAETGEMTVIHSPPF 432
Query: 340 YSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
YS+ +GY+ C R N++ D ++LS+FIH +QGE DDIL WPF G+I + L+ +
Sbjct: 433 YSNFYGYKLCMRCNLNGVDFSVGRHLSVFIHFMQGEWDDILSWPFRGKIVLSVLDQN--- 489
Query: 397 SITDEIQ-------SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTF 449
+ D+ Q S +F+RP N K FG+ ++ + DVLD + +DT
Sbjct: 490 PVADQRQHAVETLVSKPMLAAFQRPTT-HRNHKGFGYMEYVPL-DVLD--NSTYVVNDTL 545
Query: 450 VIKTQV 455
++K QV
Sbjct: 546 ILKAQV 551
>gi|410912387|ref|XP_003969671.1| PREDICTED: TNF receptor-associated factor 6-like [Takifugu
rubripes]
Length = 564
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 209/488 (42%), Gaps = 66/488 (13%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++AI T CGH+FC CI+ I G+ CP+D ++L+K+ +F DN+
Sbjct: 73 LESKYECPICLMALRNAIQTPCGHRFCKICIEKSIRDAGQR-CPVDNEMLSKEQLFPDNF 131
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLK-----YSQPSVED--ITDSPTSSF 125
+REIL + C C+ ++ + E H+ C + Q SV + + T+
Sbjct: 132 AKREILSLTVRCSNPGCTGKMELRHLEDHLAHCQFATVPCPHCQQSVRKTILEEHMTAEC 191
Query: 126 RNTS-GIP----------TNKRNSKILTVTVFPEHLN-------MQGSSNENFP-----C 162
R P + + +V + + M+ + + P C
Sbjct: 192 RRRPVSCPDCIETFVYEERERHEQQCPFASVMCPYCDMDLVRDQMESHCDTDCPIAPIAC 251
Query: 163 KFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEI 222
F GC+E + L D T H+ Y +D + N + + K +
Sbjct: 252 TFSLFGCKERMQRHDLARHMQDF-TQMHMH-----YMADFLRGLNL------NGTTPKPL 299
Query: 223 EAYLMKNKEHESKLWDPNKNQAGDDKS-SEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
A H D + + DK S +C+ + + L+ + R+V + +
Sbjct: 300 GAI-----GHSISFEDHGASASSCDKGVSSSNCAPCQPNEETQRLREMDRRLVKQDHQLR 354
Query: 282 E-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKE-INRY 333
E Q ++ + EE + + C G++ W++ +F L+ + +
Sbjct: 355 ELIILKETQAGQLAELGRRVSMLEETVRELESQHCTGIFIWRLKDFSVLLRNQEAGLPVV 414
Query: 334 FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTA 389
+S FY+ GY+ C R+++ +AQ ++SLF+H +QG D L WPF G IR
Sbjct: 415 EHSPAFYTGRPGYKLCLRLHLQSPNAQRCSNFISLFVHTMQGAFDGRLTWPFQGTIRLAI 474
Query: 390 LNTSSEFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
L+ E E+ K + +F++P N K FG+ F+ + + + ++DD
Sbjct: 475 LDQGPEGQHHVEVMETKPDLQAFQKPT-IIRNPKGFGYVTFLHLQQL---NQRAYVKDDI 530
Query: 449 FVIKTQVT 456
+I+ +VT
Sbjct: 531 LLIRCEVT 538
>gi|304360632|gb|ADM26237.1| tumor necrosis factor receptor-associated factor 6 [Litopenaeus
vannamei]
Length = 594
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 114/203 (56%), Gaps = 16/203 (7%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKL-------CNGVYFWKM 317
+L+ + E+ V L Q MLE+ IK++N K+ EE++ V +L CNG Y W +
Sbjct: 365 ILRDLCEKSVDLNQRMLEETIKLSNLA---KRIEEVDALVEAQLTEMSGKYCNGDYVWGI 421
Query: 318 YNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDAQY-LSLFIHLVQGENDD 375
NF E++ + R +S FY+S FGY+FC R NI+ + QY L+LFIH +Q ENDD
Sbjct: 422 KNFSQFCAELQNKPGRVCHSPSFYTSQFGYKFCLRTNITWKSEQYFLTLFIHGMQSENDD 481
Query: 376 ILDWPFVGRIRFTALNTSSEFS---ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRV 432
LDWPF GRI + L+ IT+ + + +FKRP + N K FGF F+ +
Sbjct: 482 FLDWPFSGRITLSVLDCDISLPKNHITETMVTKPGLQAFKRP-DVARNPKGFGFTEFVPL 540
Query: 433 ADVLDPGRGFLMEDDTFVIKTQV 455
A +L P G +++DT I+ V
Sbjct: 541 AKILQPSTGTFLKNDTLCIRATV 563
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
LDP++EC+ICL L+ I T+CGH+FC CI + + + + CP+D LT+ D+F D+
Sbjct: 25 LDPKYECAICLLGLRSPIQTTCGHRFCKDCIFNCMS-ESSSRCPVDNTPLTEADLFPDSC 83
Query: 73 TRREILENNLTCPYK--QCSSQLSIPEYESHVNTC 105
REIL+ ++ CP C + + E H C
Sbjct: 84 AEREILQLSVKCPNHGLGCRRTVDLMYIEHHTQAC 118
>gi|301782257|ref|XP_002926543.1| PREDICTED: TNF receptor-associated factor 6-like [Ailuropoda
melanoleuca]
Length = 541
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 209/492 (42%), Gaps = 84/492 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREI-------------------------------LENNLTC--PYKQCSSQLSI---- 95
+REI L N L C P+++C + I
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMNCLQCQRPFQKCQLNIHIHKEC 182
Query: 96 PEYESHVNTC--YLKYSQPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQ 153
P + C + + V D + P ++ + + +L P H ++
Sbjct: 183 PRRQVSCMNCAALMAFEDKEVHD-QNCPLANV-------ICEYCNTMLIREQMPNHYDLD 234
Query: 154 GSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR 213
+ PC F GC V + L +H T H+ +L S P
Sbjct: 235 CPTAP-IPCTFSTFGC-HVKMQRNHLARHLQENTQSHMRMLAQAVQSLSLALAPVP---- 288
Query: 214 QDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERM 273
Q+++ Y + S++ P + + + + + + + +L +
Sbjct: 289 -----QRDMPPY---DSSSVSRVSTPCHPEVHNFQETIQQLEGRLVRQDHQIRELTAK-- 338
Query: 274 VLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY 333
M Q + V+ + ++ E+ + + CNG+Y WK+ NF LK +E
Sbjct: 339 ------METQSMYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPV 392
Query: 334 -FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFT 388
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR
Sbjct: 393 VIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLA 452
Query: 389 ALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLM 444
L+ SE + +EI K +F+RP N K FG+ F+ + + R F+
Sbjct: 453 ILD-QSEAPVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI- 507
Query: 445 EDDTFVIKTQVT 456
+DDT +++ +V+
Sbjct: 508 KDDTLLVRCEVS 519
>gi|449270116|gb|EMC80834.1| TNF receptor-associated factor 6 [Columba livia]
Length = 545
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 202/492 (41%), Gaps = 82/492 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC CI I G + CPID ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAG-HKCPIDNEILLENQLFPDNF 122
Query: 73 TR---------------------REILENNLTCPYK-----QCSSQLSIPEYESHVN--- 103
+ R + ++ L C + QC + H+
Sbjct: 123 AKREILSLMVKCPNKGCSTKMELRHLEDHELQCDFSTVECPQCQGAFQKNHLKEHMTQEC 182
Query: 104 ----------TCYLKYSQPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQ 153
+ Y + D T + F + +L P H +
Sbjct: 183 PRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYC--------NTVLIREQMPNHYD-N 233
Query: 154 GSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR 213
PC + GC E + L +H T H+ ++ + + +TN
Sbjct: 234 DCPTAPVPCFYSAFGCPEKMQRNELA-RHMQEFTQVHMRMMAQSFQNISVTATNPVPF-- 290
Query: 214 QDTSNQKEIEAYLMKNKEHESKLWDPN-KNQAGDDKSSEGDCSCKTCGDNSHLLKLVYER 272
N E L + H + +P +N + EG H ++ + +
Sbjct: 291 ---INGLPFEPALFSHVSHTAYDCNPEVENFKETIQQLEGRLV-----RQDHQIRELIAK 342
Query: 273 MVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR 332
M M E K + N E + + E + CNG+Y WK+ NF + L++ +E R
Sbjct: 343 METQNTHMAELKRTIRNLEGKISEMEA-------QQCNGIYIWKIENF-SGLQKAQEEER 394
Query: 333 --YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIR 386
+S FY+ GY+ C R++I +AQ ++SLF+H +QGE D L WPF G IR
Sbjct: 395 PVVMHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIR 454
Query: 387 FTALNTS--SEFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFL 443
+ L+ S E +E+ K +F+RP N K FG+ F+ + + R F+
Sbjct: 455 LSILDQSEGPERQNHEEVMEAKPELLAFQRPT-IHRNPKGFGYVTFMHLQALKQ--RTFV 511
Query: 444 MEDDTFVIKTQV 455
+DDT +++ +V
Sbjct: 512 -KDDTLLVRCEV 522
>gi|194217834|ref|XP_001914971.1| PREDICTED: TNF receptor-associated factor 6-like [Equus caballus]
Length = 508
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 203/467 (43%), Gaps = 67/467 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ D+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQ---DHQ 119
Query: 73 TRREI-LENNLTC--PYKQCSSQLSI------PEYESHVNTCY--LKYSQPSVEDITDSP 121
E L N C P+++C QL+I P + C + + + D + P
Sbjct: 120 AHCEFALMNCPQCQHPFQKC--QLNIHMLKECPRRQVSCVNCAVSMAFEDKEIHD-QNCP 176
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEK 181
++ + + +L P H ++ + PC F GC E + L +
Sbjct: 177 LANV-------ICEYCNTMLIREQMPNHYDLDCPTAP-IPCTFNTFGCHEKMQRNHL-AR 227
Query: 182 HYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPN- 240
H T H+ +L S P Q+++ Y S P
Sbjct: 228 HLQENTQSHMRMLAQAVQSLSLALAPVP---------QRDMLPYDSAPLSRVSSGCYPEV 278
Query: 241 KNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE--RMVLLEQSMLEQKIKVNNFELNLKQTE 298
+N + EG +LV + ++ L M Q I V+ + ++ E
Sbjct: 279 RNFQETIQQLEG--------------RLVRQDHQIRELTAKMETQSIYVSELKRTIRTLE 324
Query: 299 EIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRE 357
+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 325 DKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLP 384
Query: 358 DAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFD 409
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE I +EI K
Sbjct: 385 TAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPIRQNHEEIMDAKPELL 443
Query: 410 SFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 444 AFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 486
>gi|307168590|gb|EFN61648.1| TNF receptor-associated factor 6 [Camponotus floridanus]
Length = 367
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 129/234 (55%), Gaps = 28/234 (11%)
Query: 233 ESKLWDP---NKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNN 289
ESKLWDP N Q D + S D L+K +YE+++ L+Q I V+N
Sbjct: 144 ESKLWDPTPKNGTQITDREPSP---------DWQQLVKNLYEKIIALQQENQALSIMVSN 194
Query: 290 FELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEM--KEINRYFYSACFYSSCFGYR 347
Q ++E + L+ CNG+ W++ +F KL M + + FYS FY++ GY+
Sbjct: 195 ------QKNKLE-TMCLRNCNGICIWRLDSFQEKLTAMLNDPLTKMFYSPDFYTNPNGYK 247
Query: 348 FCTRVNISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDK 406
C R+NI +++ YLSL +H ++ ENDD LDWPF G++ F ++ S+ +I + +S
Sbjct: 248 ICARLNIFSQNSDYLSLVLHFMKSENDDALDWPFDGKMYFILVHPQDSKKNICETAKSVP 307
Query: 407 NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMTH 460
N ++F++P NK+++GF F+RV DV + +++++ + + +V H
Sbjct: 308 NVEAFRKPT-CDRNKRSYGFQEFVRVCDVFN-----FLQNNSLIFRIEVCAKLH 355
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 83/131 (63%), Gaps = 5/131 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++PRFECSICL +L+D +LTSCGHKFC+ CI +W++ G CP+D + L +++F D Y
Sbjct: 30 VEPRFECSICLSWLQDPVLTSCGHKFCSECIRNWLEKGG--VCPVDNQPLKSENLFRDLY 87
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTS-SFRNTS 129
T REI E +TC Y+Q C +LS + E+H+N C + + P + + ++ + S +
Sbjct: 88 TSREISEKRITCRYQQFGCQVELSPVDVETHINQCTYRRNLPESQAVQNTNNAMSAESKL 147
Query: 130 GIPTNKRNSKI 140
PT K ++I
Sbjct: 148 WDPTPKNGTQI 158
>gi|426333685|ref|XP_004028402.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Gorilla
gorilla gorilla]
Length = 620
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 102 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 161
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 162 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREAVLRKDLKEHLS 221
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 222 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 281
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 282 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 337
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 338 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 396
Query: 270 -------------------YERMVLLEQS-----MLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE S +LE++ ++ +N+ + + ++
Sbjct: 397 NQQQNKFDLRPLMEAVDTVKQKITLLENSDQRLAVLEEETNKHDTHINIHKAQLSKNEER 456
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 457 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGS 516
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 517 GRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 576
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 577 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 612
>gi|2138180|gb|AAC51329.1| TNF receptor associated factor 5, partial [Homo sapiens]
Length = 538
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 223/518 (43%), Gaps = 82/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 20 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 79
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 80 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLS 139
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
+ FR + N +N +KI+ T EHL + +
Sbjct: 140 ASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 199
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC V + L++H H+ L+ K Q ++ Q
Sbjct: 200 EQDCPFKHY--GC-AVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQISDLHKSLEQKE 256
Query: 217 SNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV- 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 257 SKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVN 315
Query: 270 ------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVL 306
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 316 QQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEERF 375
Query: 307 KLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA- 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 376 KLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSG 435
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 436 RGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGE 495
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 496 M--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 530
>gi|426333687|ref|XP_004028403.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Gorilla
gorilla gorilla]
Length = 557
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREAVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 274
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 275 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 333
Query: 270 -------------------YERMVLLEQS-----MLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE S +LE++ ++ +N+ + + ++
Sbjct: 334 NQQQNKFDLRPLMEAVDTVKQKITLLENSDQRLAVLEEETNKHDTHINIHKAQLSKNEER 393
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 394 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGS 453
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 454 GRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 513
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 514 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>gi|11321603|ref|NP_004610.1| TNF receptor-associated factor 5 [Homo sapiens]
gi|22027627|ref|NP_665702.1| TNF receptor-associated factor 5 [Homo sapiens]
gi|77404348|ref|NP_001029082.1| TNF receptor-associated factor 5 [Homo sapiens]
gi|30580600|sp|O00463.2|TRAF5_HUMAN RecName: Full=TNF receptor-associated factor 5; AltName: Full=RING
finger protein 84
gi|2982671|dbj|BAA25262.1| TRAF5 [Homo sapiens]
gi|20810009|gb|AAH29600.1| TNF receptor-associated factor 5 [Homo sapiens]
gi|49168598|emb|CAG38794.1| TRAF5 [Homo sapiens]
gi|119613826|gb|EAW93420.1| TNF receptor-associated factor 5, isoform CRA_b [Homo sapiens]
gi|119613828|gb|EAW93422.1| TNF receptor-associated factor 5, isoform CRA_b [Homo sapiens]
gi|254071489|gb|ACT64504.1| TNF receptor-associated factor 5 protein [synthetic construct]
gi|254071491|gb|ACT64505.1| TNF receptor-associated factor 5 protein [synthetic construct]
gi|307685711|dbj|BAJ20786.1| TNF receptor-associated factor 5 [synthetic construct]
Length = 557
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 223/518 (43%), Gaps = 82/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
+ FR + N +N +KI+ T EHL + +
Sbjct: 159 ASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC V + L++H H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GC-AVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQISDLHKSLEQKE 275
Query: 217 SNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV- 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 276 SKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVN 334
Query: 270 ------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVL 306
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 335 QQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEERF 394
Query: 307 KLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA- 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 395 KLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSG 454
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 455 RGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGE 514
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 515 M--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>gi|119613825|gb|EAW93419.1| TNF receptor-associated factor 5, isoform CRA_a [Homo sapiens]
gi|119613827|gb|EAW93421.1| TNF receptor-associated factor 5, isoform CRA_a [Homo sapiens]
Length = 621
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 223/518 (43%), Gaps = 82/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 103 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 162
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 163 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLS 222
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
+ FR + N +N +KI+ T EHL + +
Sbjct: 223 ASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 282
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC V + L++H H+ L+ K Q ++ Q
Sbjct: 283 EQDCPFKHY--GC-AVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQISDLHKSLEQKE 339
Query: 217 SNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV- 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 340 SKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVN 398
Query: 270 ------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVL 306
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 399 QQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEERF 458
Query: 307 KLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA- 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 459 KLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSG 518
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 519 RGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGE 578
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 579 M--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 613
>gi|328717706|ref|XP_003246283.1| PREDICTED: TNF receptor-associated factor 6-like [Acyrthosiphon
pisum]
Length = 269
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 71/305 (23%)
Query: 179 LEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD 238
+ +H L T H++ + DG++S K +EA +++WD
Sbjct: 3 VHRHVTLLTKSHIDFMNKFQIRDGARS--------------KALEA---------TQMWD 39
Query: 239 PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNF-------E 291
+K D +SE C +YER+V+LEQS +E+ + +
Sbjct: 40 ADK-----DPNSEKALLCN-----------LYERIVVLEQSNIEKDKDIERLTQKNAIKD 83
Query: 292 LNLKQTEEIEDNVVLKL-----------CNGVYFWKMYNFPAKLKEMKE--INRYFYSAC 338
+++Q ++ +N+++K CNGVY W+ NF LK M+E + +Y+
Sbjct: 84 KDIEQLSQMVNNLIVKFDQSQNAISLITCNGVYIWRFENFMESLKSMREKPLQTQYYTPG 143
Query: 339 FYSSCFGYRFCTRVNISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-S 397
FY+S GY+ C R+N+S D + LSLFIH+++G+ DD L WPF G I + ++ ++ +
Sbjct: 144 FYTSSAGYKVCGRINMS-TDNRNLSLFIHMMRGDYDDTLTWPFSGHITLSLIHPTNPMQN 202
Query: 398 ITDEIQSDKNFDSFKR-------PVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
I ++QS ++F+R LN +AFG+ F+ + +VL G +++D+ V
Sbjct: 203 ICLKMQSSAESEAFRRCSFGNIGNEVLSLNPRAFGYTEFVAIDEVLQNG---FIKNDSIV 259
Query: 451 IKTQV 455
IK V
Sbjct: 260 IKIIV 264
>gi|332811851|ref|XP_001170017.2| PREDICTED: TNF receptor-associated factor 5 isoform 5 [Pan
troglodytes]
Length = 621
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 103 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 162
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 163 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLS 222
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 223 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 282
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 283 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 338
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 339 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 397
Query: 270 -------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 398 NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEER 457
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 458 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGS 517
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 518 GRGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 577
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 578 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 613
>gi|332247868|ref|XP_003273083.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Nomascus
leucogenys]
gi|332247870|ref|XP_003273084.1| PREDICTED: TNF receptor-associated factor 5 isoform 3 [Nomascus
leucogenys]
Length = 557
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVINSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 274
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 275 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 333
Query: 270 -------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 334 NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEER 393
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 394 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSHCGYRLCARAYLNGDGS 453
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 454 GKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 513
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 514 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>gi|395729041|ref|XP_003775475.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Pongo
abelii]
Length = 557
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/518 (23%), Positives = 221/518 (42%), Gaps = 82/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC K + L E H H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCAVTDKRRNLQE-HERSALREHMRLVLEKNVQLEEQISDLHKSLEQKE 275
Query: 217 SNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV- 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 276 SKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVN 334
Query: 270 ------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVL 306
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 335 QQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEERF 394
Query: 307 KLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA- 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 395 KLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSG 454
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 455 KGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGE 514
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 515 M--NIASGCPRFV-AHSVLENAKNAYLKDDTLFLKVAV 549
>gi|114572480|ref|XP_001169985.1| PREDICTED: TNF receptor-associated factor 5 isoform 4 [Pan
troglodytes]
gi|332811853|ref|XP_003308783.1| PREDICTED: TNF receptor-associated factor 5 [Pan troglodytes]
gi|397486250|ref|XP_003814243.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Pan
paniscus]
gi|397486252|ref|XP_003814244.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Pan
paniscus]
gi|397486254|ref|XP_003814245.1| PREDICTED: TNF receptor-associated factor 5 isoform 3 [Pan
paniscus]
gi|410221044|gb|JAA07741.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410259310|gb|JAA17621.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410329663|gb|JAA33778.1| TNF receptor-associated factor 5 [Pan troglodytes]
Length = 557
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 274
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 275 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 333
Query: 270 -------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 334 NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEER 393
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 394 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGS 453
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 454 GRGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 513
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 514 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>gi|410300842|gb|JAA29021.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410300844|gb|JAA29022.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410300846|gb|JAA29023.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410300848|gb|JAA29024.1| TNF receptor-associated factor 5 [Pan troglodytes]
gi|410300850|gb|JAA29025.1| TNF receptor-associated factor 5 [Pan troglodytes]
Length = 557
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLS 158
Query: 121 PTSSFR-------NTSGIPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 274
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 275 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 333
Query: 270 -------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 334 NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEER 393
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 394 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGS 453
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 454 GRGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 513
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 514 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>gi|441613157|ref|XP_003273082.2| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Nomascus
leucogenys]
Length = 618
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 100 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVINSQEVFKDNC 159
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 160 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLS 219
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 220 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 279
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 280 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 335
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 336 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 394
Query: 270 -------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 395 NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEER 454
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 455 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSHCGYRLCARAYLNGDGS 514
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 515 GKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 574
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 575 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 610
>gi|297662063|ref|XP_002809541.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Pongo
abelii]
Length = 621
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 222/518 (42%), Gaps = 82/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 103 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 162
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 163 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNEKCREPVLRKDLKEHLS 222
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 223 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 282
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC V + L++H H+ L+ K Q ++ Q
Sbjct: 283 EQDCPFKHY--GC-AVTDKRRNLQEHERSALREHMRLVLEKNVQLEEQISDLHKSLEQKE 339
Query: 217 SNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV- 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 340 SKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVN 398
Query: 270 ------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVL 306
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 399 QQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEERF 458
Query: 307 KLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA- 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 459 KLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSG 518
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 519 KGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGE 578
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 579 M--NIASGCPRFV-AHSVLENAKNAYLKDDTLFLKVAV 613
>gi|109018380|ref|XP_001108970.1| PREDICTED: TNF receptor-associated factor 5-like [Macaca mulatta]
Length = 557
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCRSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E+ + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCQEPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 274
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 275 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 333
Query: 270 -------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 334 NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLNKNEER 393
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+ GYR C R ++ + +
Sbjct: 394 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTGRCGYRLCARAYLNGDGS 453
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 454 GKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 513
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 514 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>gi|383421239|gb|AFH33833.1| TNF receptor-associated factor 5 [Macaca mulatta]
Length = 557
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCRSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDS----------- 120
+RE+L + C C++++ + Y+ H+ C + Q S E+ +S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCQESVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 274
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 275 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 333
Query: 270 -------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 334 NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLNKNEER 393
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+ GYR C R ++ + +
Sbjct: 394 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTGRCGYRLCARAYLNGDGS 453
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 454 GKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 513
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 514 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>gi|402857258|ref|XP_003893183.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Papio
anubis]
gi|402857260|ref|XP_003893184.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Papio
anubis]
gi|402857262|ref|XP_003893185.1| PREDICTED: TNF receptor-associated factor 5 isoform 3 [Papio
anubis]
Length = 557
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 224/519 (43%), Gaps = 84/519 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCRSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E+ + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCREPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N +KI+ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
++ P K Y GC K + L E +H L+ H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQK 274
Query: 216 TSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 275 ESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMV 333
Query: 270 -------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVV 305
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 334 NQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLNKNEER 393
Query: 306 LKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
KL NG WK+ ++ K +E + + +S FY+ GYR C R ++ + +
Sbjct: 394 FKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTGRCGYRLCARAYLNGDGS 453
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 454 GKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDG 513
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 514 EM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>gi|296230195|ref|XP_002760602.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Callithrix
jacchus]
Length = 558
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 223/518 (43%), Gaps = 81/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C+++L + Y+ H+ C + Q S E+ + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKLILGRYQDHLQQCLFQAVQCSNENCQEPVLRKDMKEHLS 158
Query: 121 PTSSFRNTSGI-------PTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR + N +N SKI+ T EHL + +
Sbjct: 159 TYCQFREEKCVYCKKDVVVINLQNHEENLCPEYPVVCPNNCSKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNT-PSHGRQD 215
++ P K Y GC V + L++H H+ L+ K Q ++ S G+++
Sbjct: 219 EQDCPFKHY--GC-AVMDKRRNLQEHEQSALREHMRLVLEKNVQLEEQISDLYKSLGQKE 275
Query: 216 TSNQK--EIEAYLMKNKEHESKLWDPNKN--------QAGDDKSSEGDCSCKTCGDN--- 262
+ QK E + + K + ++ + N + + DKS+ +
Sbjct: 276 SKIQKLEETISKIEKEFKQHTQFFGRNGSFLSNIQVFASHIDKSAWLEAQMHQLSQTVKQ 335
Query: 263 ----------SHLLKLVYERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
L V +++ LLE ++LE++ ++ +N+ + + ++ K
Sbjct: 336 QQNKFDLRPLMEALDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLNKNEERFK 395
Query: 308 LC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA-- 359
L NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 396 LLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSGK 455
Query: 360 -QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + + I + ++D N SFKRP
Sbjct: 456 GTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGE 515
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 516 M--NIASGCPRFV-AHSVLENAKNTYIKDDTLFLKVAV 550
>gi|260794310|ref|XP_002592152.1| hypothetical protein BRAFLDRAFT_85024 [Branchiostoma floridae]
gi|229277367|gb|EEN48163.1| hypothetical protein BRAFLDRAFT_85024 [Branchiostoma floridae]
Length = 473
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 215/495 (43%), Gaps = 82/495 (16%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTK 64
P A+ L +EC IC+ +D + T+CGH+FCA C+ + K CPID L
Sbjct: 6 PEADFVQPLSKVYECPICMLAFRDPVQTACGHRFCADCLGPCMRKKNPQ-CPIDGLELHP 64
Query: 65 DDIFIDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLK-------------- 108
D +F D R++L + C ++ C + + + + H+ TC +
Sbjct: 65 DKLFADVAFSRQVLSLTVRCNFRSDGCDWKGELRDLQEHLETCTYRDMVNMACGQVGGKK 124
Query: 109 -YSQPSVEDIT-------DSPTSSF----RNTSGIPTNKRNS---KILTVTVFPEHLN-M 152
+ +V I + P+ + +P N NS K + + P+HL+ +
Sbjct: 125 ARKEEAVSKIKKCKHCGKEVPSREMVLHHESCLAVPVNCPNSCGLKDVARSQLPQHLDPV 184
Query: 153 QGSSNEN-FPCKFYQVGCREVFKS-QALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
+G+ ++ PC F GC F++ + + KH + +HL LL K +D Q+
Sbjct: 185 RGNCPQSVLPCPFKPAGC--TFQAKRPEMNKHLKVLPQYHLGLLCQKI-NDIHQTL---- 237
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNK---NQAGDDKSSEG---DCSCKTCGDNSH 264
++ ++ A K E ++ + N +Q KS G + K C +
Sbjct: 238 -----AKHEGQMRAQAAKVAEQNERIQNQNALLTSQHQRVKSQNGKLESLTVKVCNQS-- 290
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
E++ LL+ +L ++ + +K+ +E+E +G W++ NF +
Sbjct: 291 ------EKIELLQTELLRKEAIIAE---QMKKIKELEVTSY----DGSLLWRINNFSQRH 337
Query: 325 KEM--KEINRYFYSACFYSSCFGYRFCTRV---NISREDAQYLSLFIHLVQGENDDILDW 379
+E K++ YS FY+S FGY+ C +V ++S++ H+++ D +L W
Sbjct: 338 QEAASKQVPS-IYSPPFYTSRFGYKMCIQVFANGGGETRGTHMSIYFHILKHRYDSVLQW 396
Query: 380 PFVGRIRFTALNTSSEFS----ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
PF I FT L+ S + + I+ + D +++RP + + GF+ F+ + +
Sbjct: 397 PFPHNITFTLLDQSDDSNKAEHISHTLVPDATAPNYQRPTSSM--SEGRGFHKFVSLEKL 454
Query: 436 LDPGRGFLMEDDTFV 450
R + +D+ F+
Sbjct: 455 WS--RSYTKDDNLFI 467
>gi|156407390|ref|XP_001641527.1| predicted protein [Nematostella vectensis]
gi|156228666|gb|EDO49464.1| predicted protein [Nematostella vectensis]
Length = 531
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 198/524 (37%), Gaps = 98/524 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
LDP++ C +C LK + T CGH+FC C++ + +G + CP+D + L D +F D
Sbjct: 15 LDPKYRCPVCGNALKHPVQTPCGHRFCEGCLEPIL--RGPSKCPVDGEELKIDGVFKDVC 72
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQ----------------PSV 114
RREIL CP +Q C + E H C K Q +
Sbjct: 73 CRREILCLACYCPNRQLGCEWMKDLQYLEEHRANCEYKGVQCHNPGCQEKVAKRDLEAHL 132
Query: 115 EDITDSPTSSFRNTSGIPTNKRNSKILTVTVFP---EHLNMQG-------------SSNE 158
E P+ IP + T P H +G
Sbjct: 133 ERCEFKPSDCQYCLQRIPAASMEDHLQTCEKHPVVCPHCGAEGICRDELLHHQTNICEQA 192
Query: 159 NFPCKFYQVGCREVFK-SQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTS 217
PC F + GC FK ++ LE H+ + S H+ LL +T R + +
Sbjct: 193 ELPCSFAKHGCH--FKGTREALETHFRDQASVHVNLLLT--------ATQNEEKARSEMA 242
Query: 218 ---NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMV 274
+Q E E + + +E + NQ + + ++ + L + ER+
Sbjct: 243 AKLSQMEKERAKQQEQMYEQREALAVANQNLRTYQGKLNVIERSVAEQRRELAELKERIQ 302
Query: 275 LLE-----------------------------QSM-----LEQKIKVNNFELNLKQTEEI 300
L E SM LE++ N +L L +
Sbjct: 303 LQEVEAAIREQDRRLGMIENEASRGAAPSSGPGSMGGTMALERRQDRNEHQLALHDIQLA 362
Query: 301 EDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNI 354
E ++ L++ +G Y WK+ + + +E + YS FY +GY+ C RV
Sbjct: 363 EHDLKLQMLEATSYDGTYIWKIDEYTRRYQEGVSGKTPSIYSPPFYVGRYGYKACARVYP 422
Query: 355 SRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSF 411
+ + +LSLF L++GE D +L WPF ++ F L+ I D + D SF
Sbjct: 423 NGDGMGKGSHLSLFFVLMRGEFDALLPWPFRQKVTFKLLDQDRVHDIGDTFRPDPTSSSF 482
Query: 412 KRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
KRP + A G FI ++ R ++ DDT IK V
Sbjct: 483 KRPTSNM--NIASGCPLFISHTNLQT--RAYV-RDDTMFIKIAV 521
>gi|308199433|ref|NP_001184047.1| TNF receptor-associated factor 5 [Canis lupus familiaris]
gi|209361186|gb|ACI43177.1| TRAF5 [Canis lupus familiaris]
Length = 558
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 214/519 (41%), Gaps = 83/519 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C++C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCALCHSVLHNPHQTGCGHRFCQHCILSLRELNAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S ED + S
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRYQDHLQHCPFQAVQCSNEDCQEPVLRKDLKEHVS 158
Query: 121 PTSSFRNTS------------------------GIPTNKRNSKILTVTVFPEHLNMQGSS 156
+ FR +P + S+I+ T EHL + +
Sbjct: 159 TSCQFREERCLYCKKDVVVIHLQNHEENLCPEYPVPCPNKCSQIIPRTEVDEHLTVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC V + L++H H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GCT-VKDKRGSLQEHEHSALRDHMLLVLEKNLQLEEQISDLYKSLEQKE 275
Query: 217 SNQKEIEAYLMKNKEHESKLWDPNKNQAGD------------DKSSEGDCSCK------- 257
S +++ A +K E E K + + G DKS+ + +
Sbjct: 276 SKIQQL-AETVKKFEKEFKQFAQLFGKNGSFLSNIQVLANHIDKSAWLEAQVRQLLQMAN 334
Query: 258 ----------------TCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIE 301
T LL+ +R+V+LE + +N + L + EE
Sbjct: 335 QQQNKFDLRPLVEAIDTVKQKITLLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEERF 394
Query: 302 DNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA- 359
+ NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 395 KLLEGACYNGKLIWKVTDYKMKKREALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSG 454
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVN 416
+LSL+ +++GE D +L WPF R+ L+ S + + I + ++D + SFKRP
Sbjct: 455 KGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIMETFKADPSSSSFKRPDG 514
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ L+ + ++DDT +K V
Sbjct: 515 EM--NIASGCPRFV-AHSTLENAKNTYIKDDTVFLKVAV 550
>gi|194763709|ref|XP_001963975.1| GF20974 [Drosophila ananassae]
gi|190618900|gb|EDV34424.1| GF20974 [Drosophila ananassae]
Length = 476
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 10/225 (4%)
Query: 237 WDPNKNQAGDDKSSE-GDCSCK---TCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFEL 292
W P K+ A S E G G + +++ +Y+R+V+LEQ EQ+ ++ N +
Sbjct: 253 WQPQKSGASTSGSLENGQLPPPPQYANGVDEQIVQTMYQRIVVLEQRTREQETRLENLQK 312
Query: 293 NLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTR 351
L+ + + V + NG W++ F + + + N YS Y+S GY+FC R
Sbjct: 313 QLRLARQQQAPVDPRYSNGTIIWRIEQFASLVARFRANANNREYSHECYTSPHGYKFCAR 372
Query: 352 VNISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDS 410
+NI Q LSL +HL+Q END LDWPF GRI+ ++ T + S D I + +
Sbjct: 373 LNIQPRKPQVLSLHVHLMQSENDYHLDWPFKGRIKLCMVHPTDAGMSQHDTIMTKPEILA 432
Query: 411 FKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F +P ++ + FGF + +++++ G DD +IK ++
Sbjct: 433 FTQPRE-PISTRGFGFLEYADISNIMQLG---FCADDRLLIKIEI 473
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFIDN 71
LD ++EC+IC+++LK+ +LTSCGH+FC CI W+ + CP+D K L+ D DIF DN
Sbjct: 99 LDAKYECAICIDWLKEPMLTSCGHRFCHGCITDWLQNHNQ-CCPLDNKRLSADQDIFPDN 157
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQ 111
+ RREI + CP CS S E H+ +C + Q
Sbjct: 158 FVRREIEQLKHKCPNSPLGCSVVASPIELHRHLPSCPYRRQQ 199
>gi|380796467|gb|AFE70109.1| TNF receptor-associated factor 5, partial [Macaca mulatta]
Length = 515
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 221/515 (42%), Gaps = 84/515 (16%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN +RE
Sbjct: 1 YKCAFCRSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNCCKRE 60
Query: 77 ILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDS-----------PTSS 124
+L + C C++++ + Y+ H+ C + Q S E+ +S
Sbjct: 61 VLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCQESVLRKDLKEHLSAYCQ 120
Query: 125 FRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSSNENF 160
FR + N +N +KI+ T EHL + + ++
Sbjct: 121 FREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEAEQDC 180
Query: 161 PCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQ 219
P K Y GC K + L E +H L+ H+ L+ K Q ++ Q S
Sbjct: 181 PFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQISDLHKSLEQKESKI 236
Query: 220 KEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV---- 269
+++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 237 QQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVNQQQ 295
Query: 270 ---------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVLKLC 309
+++ LLE ++LE++ ++ +N+ + + ++ KL
Sbjct: 296 NKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLNKNEERFKLL 355
Query: 310 -----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---Q 360
NG WK+ ++ K +E + + +S FY+ GYR C R ++ + +
Sbjct: 356 EGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTGRCGYRLCARAYLNGDGSGKGT 415
Query: 361 YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLN 420
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 416 HLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGEM-- 473
Query: 421 KKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 474 NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 507
>gi|403277575|ref|XP_003930432.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403277577|ref|XP_003930433.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 558
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 225/518 (43%), Gaps = 81/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E+ + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQAVQCSNENCREPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
FR I N +N SKI+ T EHL + +
Sbjct: 159 AYCQFREEKCVYCKKDVIVINLQNHEENLCPEYPVFCPNSCSKIIPKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC V + L++H H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GC-AVTDKRRNLQEHEQSALREHMRLVLEKNVQLEEQISDLHKSLGQKE 275
Query: 217 SNQKEIEAYLMK-NKEHE--SKLWDPNKN--------QAGDDKSSEGDCS----CKTCGD 261
+++E + K KE + ++L+ N + + DKS+ + +T
Sbjct: 276 GKIQQLEETISKIEKEFKQYTQLFGRNGSFLSNIQVFASHIDKSALLEAQMHQLSQTVKQ 335
Query: 262 NSHLLKL---------VYERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
+ L + + +++ LLE ++LE++ ++ +N+ + + ++ K
Sbjct: 336 QQNKLDMRPLKEEVDTMKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLNKNEERFK 395
Query: 308 LC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA-- 359
L NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 396 LLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSGK 455
Query: 360 -QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + + I + ++D N SFKRP
Sbjct: 456 GTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGE 515
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 516 M--NIASGCPRFV-AHSVLENAKNTYIKDDTLFLKVAV 550
>gi|354504099|ref|XP_003514116.1| PREDICTED: TNF receptor-associated factor 2 [Cricetulus griseus]
gi|344258197|gb|EGW14301.1| TNF receptor-associated factor 2 [Cricetulus griseus]
Length = 501
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 195/457 (42%), Gaps = 76/457 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI----- 67
L+ ++ CS C L+ CGH++C+ C++S + +N + L ++ I
Sbjct: 28 LEAKYLCSACRNILRRPFQAQCGHRYCSFCLNSILSSGPQNCAACVHEGLYEEGISILES 87
Query: 68 ---FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDIT---- 118
F DN RRE+ CP C+ + ++ EYES H C +L P+ + +
Sbjct: 88 SSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFLLTECPACKGLVRLSE 147
Query: 119 -------DSPTSSFR-NTSGIPTNKRNSKIL--TVTVFPEHLNMQGS---SNENF----- 160
+ P S P N + ++ FP + G S E F
Sbjct: 148 KEHHAEQECPKRSLSCQHCKAPCNHADLEVHYEVCPKFPLTCDGCGKKKISREKFQDHVR 207
Query: 161 -------PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY----CSDGSQSTNTP 209
PC+F+ VGC E+ +++ L + H K HL LL + + S GSQS P
Sbjct: 208 SCNKCRVPCRFHTVGCSEMVENEEL-QDHEVKKLREHLALLLSSFLESPASQGSQSQAGP 266
Query: 210 S-----HG-RQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNS 263
H Q T+ + I L + E + + Q D+
Sbjct: 267 EMLQRCHSLEQKTATFENIVCVLNREVERVAVTAEACSRQHRLDQDK------------- 313
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K
Sbjct: 314 --IEALSNKVQQLERSIGLKDLAMADLE---QKVSELEASTY----DGVFIWKISDFARK 364
Query: 324 LKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDW 379
+E + +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L W
Sbjct: 365 RQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRW 424
Query: 380 PFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
PF ++ L+ ++ + D + D SF+RP++
Sbjct: 425 PFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPLS 461
>gi|124295373|gb|ABN04154.1| tumor necrosis factor receptor-associated factor 6 [Branchiostoma
belcheri]
Length = 642
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 109/193 (56%), Gaps = 19/193 (9%)
Query: 277 EQSMLEQKIKVNNFELNLKQTE----EIEDNVVLKLCNGVYFWKMYNFPAKLKE--MKEI 330
E ++EQ+ + EL L + E+E+ ++CNG Y W++ + +KL++ +
Sbjct: 452 EAKIVEQQHYIRELELKLGSLQQKYFELEEKTRERMCNGTYIWRIKEY-SKLRQQAVNGA 510
Query: 331 NRYFYSACFYSSCFGYRFCTRVNISREDAQY---LSLFIHLVQGENDDILDWPFVGRIRF 387
+S+ FY+S +GY+ C RVN++ D+ + +SLFIH + GENDDIL+WPF G+I
Sbjct: 511 ATVRHSSGFYTSYYGYKLCVRVNLNGVDSAHGTHISLFIHFMMGENDDILEWPFQGKITL 570
Query: 388 TALNTSSEFS-----ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGF 442
+ L+ +S + IT+ + S ++ +F+RP N K FG+ F + + + G
Sbjct: 571 SILDQNSNPAQQAKHITETLVSKPSYAAFQRPTT-LRNHKGFGYMEFALLRSLEN---GQ 626
Query: 443 LMEDDTFVIKTQV 455
+++DT +IK V
Sbjct: 627 YIKNDTLIIKCMV 639
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++ + T+CGH+FC CI I G CP+D LT++ IF DN+
Sbjct: 48 LEHKYECPICLMGLREPVQTNCGHRFCRYCILKSIRDAGAR-CPVDNTPLTEEQIFPDNF 106
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + C K ++ + +SH++TC
Sbjct: 107 AKREILALRVKCSNKGRKEKIELTYLDSHLSTC 139
>gi|118344312|ref|NP_001071979.1| zinc finger protein [Ciona intestinalis]
gi|92081506|dbj|BAE93300.1| zinc finger protein [Ciona intestinalis]
Length = 579
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 107/189 (56%), Gaps = 14/189 (7%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-- 333
L M Q +++ + + L E+ DN L+ CNG+Y+WK+ ++ A+L+ +
Sbjct: 388 LMAKMETQILQIKDIQNRLTGMEQRIDNQELRCCNGLYYWKIKDY-AQLRRAACLGEMPV 446
Query: 334 FYSACFYSSCFGYRFCTRVNI-SREDAQ--YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+S GYR C R N+ E AQ +LSLF+HL++G+ DD+L WPF G I T +
Sbjct: 447 LHSPGFYTSPQGYRMCIRANLDGVESAQGTHLSLFVHLMKGDFDDVLPWPFCGSITLTVI 506
Query: 391 NT----SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
N S +++ ++S N +F+RP+ N+K +G+ +F+ + L GF+ +
Sbjct: 507 NQKELPSQRAHVSEMLESRANLMAFQRPITER-NQKGYGYIDFLPLN--LIETEGFI-KS 562
Query: 447 DTFVIKTQV 455
DT VIK QV
Sbjct: 563 DTLVIKAQV 571
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
+LD ++ C ICL L+D + T CGH+FC CI I + K CP+D+ L + +F D
Sbjct: 39 SLDNKYMCPICLLALRDPVQTECGHRFCHLCILRCI--RSKASCPVDQITLFSNQLFQDR 96
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
RE+L+ CP C + + ++H+ C
Sbjct: 97 SAHREVLDLKAKCPNIGCDLVVELRNIKNHIAKC 130
>gi|194381990|dbj|BAG64364.1| unnamed protein product [Homo sapiens]
Length = 568
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 223/529 (42%), Gaps = 93/529 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYES-----------HVNTCYLKYSQPSVEDITD- 119
+RE+L + C C++++ + Y+ H+ C + Q S E +
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQQVPLACCYLLQDHLQQCLFQPVQCSNEKCREP 158
Query: 120 ----------SPTSSFRNTSG-------IPTNKRN-----------------SKILTVTV 145
S + FR + N +N +KI+ T
Sbjct: 159 VLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTE 218
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQS 205
EHL + + ++ P K Y GC V + L++H H+ L+ K Q
Sbjct: 219 VDEHLAVCPEAEQDCPFKHY--GC-AVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQI 275
Query: 206 TNTPSHGRQDTSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTC 259
++ Q S +++ A +K E E ++L+ N + + + +S D S
Sbjct: 276 SDLHKSLEQKESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLE 334
Query: 260 GDNSHLLKLV-------------------YERMVLLEQ-----SMLEQKIKVNNFELNLK 295
LL++V +++ LLE ++LE++ ++ +N+
Sbjct: 335 AQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIH 394
Query: 296 QTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFC 349
+ + ++ KL NG WK+ ++ K +E + + +S FY+S GYR C
Sbjct: 395 KAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLC 454
Query: 350 TRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK 406
R ++ + + +LSL+ +++GE D +L WPF R+ L+ S + +I + + D
Sbjct: 455 ARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDP 514
Query: 407 NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFKRP A G F+ VL+ + ++DDT +K V
Sbjct: 515 NSSSFKRPDGEM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 560
>gi|348577237|ref|XP_003474391.1| PREDICTED: TNF receptor-associated factor 5-like [Cavia porcellus]
Length = 558
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 222/518 (42%), Gaps = 81/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ +IF DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNAMPICPVDKEVIKSQEIFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + S E+ + S
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKMILGRYQDHLQQCLFQAIPCSNENCQEAVLRRDLQEHLS 158
Query: 121 PTSSFRNTSGIPTNK------------------------RNSKILTVTVFPEHLNMQGSS 156
FR + K + S+++ T EHL + +
Sbjct: 159 AYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPLSCPNKCSQVIPRTKVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC V + L++H H+ L+ K Q ++ Q
Sbjct: 219 EQHCPFKRY--GC-AVKDKRGNLQEHEQSALREHMLLVLEKNFQLEEQISDLYKSLEQKE 275
Query: 217 SNQKEIEAYLMK-NKEHE--SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKL--- 268
S +++ + K KE + ++L+ N + + + +S D S LLK+
Sbjct: 276 SKIQQLAETVRKFEKEFKQFTQLFGKNGSFLSNIQVLASHVDKSAWLEAQVCQLLKMVNQ 335
Query: 269 ----------------VYERMVLLEQS-----MLEQKIKVNNFELNLKQTEEIEDNVVLK 307
V +++ LLE + +LE + ++ +N+ +T+ ++ K
Sbjct: 336 QQHNFDLRSLVEAVDTVKQKITLLETNDRRLVVLEGETNKHDAHINIHKTQLNKNEERFK 395
Query: 308 LC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA-- 359
L NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 396 LLEGACYNGKLIWKVTDYKVKKREAVDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGK 455
Query: 360 -QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + + IT+ ++D N SFK+P
Sbjct: 456 GTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHITETFKADPNSSSFKKPDGE 515
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ L+ + ++DDT +K V
Sbjct: 516 M--NIASGCPRFV-AHSTLESTKNTYIKDDTLFLKVAV 550
>gi|397486256|ref|XP_003814246.1| PREDICTED: TNF receptor-associated factor 5 isoform 4 [Pan
paniscus]
Length = 568
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 224/530 (42%), Gaps = 95/530 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYES-----------HVNTCYLKYSQPSVEDITD- 119
+RE+L + C C++++ + Y+ H+ C + Q S E +
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQQVPLACCYLLQDHLQQCLFQAVQCSNEKCREP 158
Query: 120 ----------SPTSSFRNTSG-------IPTNKRN-----------------SKILTVTV 145
S FR + N +N +KI+ T
Sbjct: 159 VLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTE 218
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQ 204
EHL + + ++ P K Y GC K + L E +H L+ H+ L+ K Q
Sbjct: 219 VDEHLAVCPEAEQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQ 274
Query: 205 STNTPSHGRQDTSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKT 258
++ Q S +++ A +K E E ++L+ N + + + +S D S
Sbjct: 275 ISDLHKSLEQKESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWL 333
Query: 259 CGDNSHLLKLV-------------------YERMVLLEQ-----SMLEQKIKVNNFELNL 294
LL++V +++ LLE ++LE++ ++ +N+
Sbjct: 334 EAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINI 393
Query: 295 KQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRF 348
+ + ++ KL NG WK+ ++ K +E + + +S FY+S GYR
Sbjct: 394 HKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRL 453
Query: 349 CTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSD 405
C R ++ + + +LSL+ +++GE D +L WPF R+ L+ S + +I + + D
Sbjct: 454 CARAYLNGDGSGRGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPD 513
Query: 406 KNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFKRP A G F+ VL+ + ++DDT +K V
Sbjct: 514 PNSSSFKRPDGEM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 560
>gi|332811855|ref|XP_001169919.2| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Pan
troglodytes]
Length = 632
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 224/530 (42%), Gaps = 95/530 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 103 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 162
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYES-----------HVNTCYLKYSQPSVEDITD- 119
+RE+L + C C++++ + Y+ H+ C + Q S E +
Sbjct: 163 CKREVLNLYVYCSNAPGCNAKVILGRYQQVPLACCYLLQDHLQQCLFQAVQCSNEKCREP 222
Query: 120 ----------SPTSSFRNTSG-------IPTNKRN-----------------SKILTVTV 145
S FR + N +N +KI+ T
Sbjct: 223 VLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTE 282
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQ 204
EHL + + ++ P K Y GC K + L E +H L+ H+ L+ K Q
Sbjct: 283 VDEHLAVCPEAEQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQ 338
Query: 205 STNTPSHGRQDTSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKT 258
++ Q S +++ A +K E E ++L+ N + + + +S D S
Sbjct: 339 ISDLHKSLEQKESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWL 397
Query: 259 CGDNSHLLKLV-------------------YERMVLLEQ-----SMLEQKIKVNNFELNL 294
LL++V +++ LLE ++LE++ ++ +N+
Sbjct: 398 EAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINI 457
Query: 295 KQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRF 348
+ + ++ KL NG WK+ ++ K +E + + +S FY+S GYR
Sbjct: 458 HKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRL 517
Query: 349 CTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSD 405
C R ++ + + +LSL+ +++GE D +L WPF R+ L+ S + +I + + D
Sbjct: 518 CARAYLNGDGSGRGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPD 577
Query: 406 KNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFKRP A G F+ VL+ + ++DDT +K V
Sbjct: 578 PNSSSFKRPDGEM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 624
>gi|335281284|ref|XP_003122386.2| PREDICTED: TNF receptor-associated factor 2 [Sus scrofa]
Length = 501
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 203/491 (41%), Gaps = 70/491 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C+ + + +N + +L
Sbjct: 28 LEDKYLCSACRNVLRRPFQAQCGHRYCSYCLSNILSSGPQNCAACVHEGIYEEGVSILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT---- 118
F DN RRE+ CP C+ + ++ EYES H C ++ P+ + +
Sbjct: 88 SSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGHCPFVLTECPACKGLVRLGE 147
Query: 119 -------DSPTSSFR-NTSGIPTNKRNSK--ILTVTVFPEHLNMQGS---SNENF----- 160
+ P S P N K + FP + G S E F
Sbjct: 148 KERHLGQECPERSLSCRHCRAPCCSANMKAHLQVCPKFPLTCDGCGKKKISREKFQDHVR 207
Query: 161 -------PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR 213
PC+F+ VGC E+ +S+ E H + HL LL + ++ +P G
Sbjct: 208 TCGRCRVPCRFHAVGCPEMVESEKQQE-HEAQRLREHLGLLLGVF----LEARPSPGLGP 262
Query: 214 QDTSNQ-KEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL----LKL 268
+ + EA K E+ + N+ ++E CG L ++
Sbjct: 263 SKAAELLQRCEALERKTATFENIVCVLNREVERVAMTAE------ACGRQHRLDQDRIEA 316
Query: 269 VYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-M 327
+ ++ LE+S+ + + V + E ++ +E++ + +GV+ WK+ +F K +E +
Sbjct: 317 LSNKVQQLERSIGLKDLAVADLE---QKVQELQASTF----DGVFIWKISDFARKRQEAV 369
Query: 328 KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGR 384
+S FY+S +GY+ C R ++ + +LSLF L++G ND +L WPF +
Sbjct: 370 AGRAPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMKGPNDALLRWPFNQK 429
Query: 385 IRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLM 444
+ L+ ++ + D + D + SF+RPV A G F V+ + R +
Sbjct: 430 VTLMLLDQNNREHVIDAFRPDVSSSSFQRPVGDM--NIASGCPLFCPVSRM--EARSSYV 485
Query: 445 EDDTFVIKTQV 455
DD IK V
Sbjct: 486 RDDAIFIKAIV 496
>gi|441613163|ref|XP_004088126.1| PREDICTED: TNF receptor-associated factor 5 [Nomascus leucogenys]
Length = 629
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 224/530 (42%), Gaps = 95/530 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 100 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVINSQEVFKDNC 159
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYES-----------HVNTCYLKYSQPSVEDITD- 119
+RE+L + C C++++ + Y+ H+ C + Q S E +
Sbjct: 160 CKREVLNLYVYCSNAPGCNAKVILGRYQQIPLACCYLLQDHLQQCLFQAVQCSNEKCREP 219
Query: 120 ----------SPTSSFRNTSG-------IPTNKRN-----------------SKILTVTV 145
S FR + N +N +KI+ T
Sbjct: 220 VLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTE 279
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQ 204
EHL + + ++ P K Y GC K + L E +H L+ H+ L+ K Q
Sbjct: 280 VDEHLAVCPEAEQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQ 335
Query: 205 STNTPSHGRQDTSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKT 258
++ Q S +++ A +K E E ++L+ N + + + +S D S
Sbjct: 336 ISDLHKSLEQKESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWL 394
Query: 259 CGDNSHLLKLV-------------------YERMVLLEQ-----SMLEQKIKVNNFELNL 294
LL++V +++ LLE ++LE++ ++ +N+
Sbjct: 395 EAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINI 454
Query: 295 KQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRF 348
+ + ++ KL NG WK+ ++ K +E + + +S FY+S GYR
Sbjct: 455 HKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSHCGYRL 514
Query: 349 CTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSD 405
C R ++ + + +LSL+ +++GE D +L WPF R+ L+ S + +I + + D
Sbjct: 515 CARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPD 574
Query: 406 KNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFKRP A G F+ VL+ + ++DDT +K V
Sbjct: 575 PNSSSFKRPDGEM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 621
>gi|395729043|ref|XP_003775476.1| PREDICTED: TNF receptor-associated factor 5 isoform 3 [Pongo
abelii]
Length = 632
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 222/529 (41%), Gaps = 93/529 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 103 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 162
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYES-----------HVNTCYLKYSQPSVEDITD- 119
+RE+L + C C++++ + Y+ H+ C + Q S E +
Sbjct: 163 CKREVLNLYVYCSNAPGCNAKVILGRYQQVPLACCYLLQDHLQQCLFQAVQCSNEKCREP 222
Query: 120 ----------SPTSSFRNTSG-------IPTNKRN-----------------SKILTVTV 145
S FR + N +N +KI+ T
Sbjct: 223 VLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTE 282
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQS 205
EHL + + ++ P K Y GC V + L++H H+ L+ K Q
Sbjct: 283 VDEHLAVCPEAEQDCPFKHY--GC-AVTDKRRNLQEHERSALREHMRLVLEKNVQLEEQI 339
Query: 206 TNTPSHGRQDTSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTC 259
++ Q S +++ A +K E E ++L+ N + + + +S D S
Sbjct: 340 SDLHKSLEQKESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLE 398
Query: 260 GDNSHLLKLV-------------------YERMVLLEQ-----SMLEQKIKVNNFELNLK 295
LL++V +++ LLE ++LE++ ++ +N+
Sbjct: 399 AQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIH 458
Query: 296 QTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFC 349
+ + ++ KL NG WK+ ++ K +E + + +S FY+S GYR C
Sbjct: 459 KAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLC 518
Query: 350 TRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK 406
R ++ + + +LSL+ +++GE D +L WPF R+ L+ S + +I + + D
Sbjct: 519 ARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDP 578
Query: 407 NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFKRP A G F+ VL+ + ++DDT +K V
Sbjct: 579 NSSSFKRPDGEM--NIASGCPRFV-AHSVLENAKNAYLKDDTLFLKVAV 624
>gi|431915889|gb|ELK16143.1| TNF receptor-associated factor 5 [Pteropus alecto]
Length = 558
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 223/518 (43%), Gaps = 81/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELHAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E+ + S
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRYQDHLQQCLFQAVQCSNENCREPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSGI----------------------PTNKRNS--KILTVTVFPEHLNMQGSS 156
FR + P + N +I++ T EHL + +
Sbjct: 159 ADCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVSCPNKCLQIISRTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNT-PSHGRQD 215
++ P K Y GC V + L++H H+ L+ K Q ++ S R++
Sbjct: 219 KQDCPFKHY--GC-TVKDKRGKLQQHEHSALRDHMLLVLEKNFQLEEQISDLYKSLERKE 275
Query: 216 TSNQKEIEAYLMKNKEHE--SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKL--- 268
+ Q+ E KE + ++L+ N + + + +S D S LL++
Sbjct: 276 SKIQQLAETVKKFEKEFKQFAQLFGKNGSFLSNIQVLASHIDKSAWLEAQVRQLLQMANQ 335
Query: 269 ----------------VYERMVLLEQS-----MLEQKIKVNNFELNLKQTEEIEDNVVLK 307
V +++ LLE + +LE + ++ +N+ + + ++ K
Sbjct: 336 QQNKFDLRTLVEAIDTVKQKITLLESNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFK 395
Query: 308 LC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA-- 359
L NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 396 LLEGACYNGKLIWKVTDYKMKKREALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGK 455
Query: 360 -QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + + I + ++D N SFKRP
Sbjct: 456 GTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGE 515
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ L+ + ++DDT +K V
Sbjct: 516 M--NIASGCPRFV-AHSTLENAKNTYVKDDTMFLKVAV 550
>gi|355558795|gb|EHH15575.1| hypothetical protein EGK_01685 [Macaca mulatta]
gi|355745941|gb|EHH50566.1| hypothetical protein EGM_01419 [Macaca fascicularis]
Length = 568
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 224/530 (42%), Gaps = 95/530 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCRSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYES-----------HVNTCYLKYSQPSVEDITD- 119
+RE+L + C C++++ + Y+ H+ C + Q S E+ +
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQQVPLACCYLLQDHLQQCLFQAVQCSNENCQEP 158
Query: 120 ----------SPTSSFRNTSG-------IPTNKRN-----------------SKILTVTV 145
S FR + N +N +KI+ T
Sbjct: 159 VLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTE 218
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQ 204
EHL + + ++ P K Y GC K + L E +H L+ H+ L+ K Q
Sbjct: 219 VDEHLAVCPEAEQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQ 274
Query: 205 STNTPSHGRQDTSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKT 258
++ Q S +++ A +K E E ++L+ N + + + +S D S
Sbjct: 275 ISDLHKSLEQKESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWL 333
Query: 259 CGDNSHLLKLV-------------------YERMVLLEQ-----SMLEQKIKVNNFELNL 294
LL++V +++ LLE ++LE++ ++ +N+
Sbjct: 334 EAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINI 393
Query: 295 KQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRF 348
+ + ++ KL NG WK+ ++ K +E + + +S FY+ GYR
Sbjct: 394 HKAQLNKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTGRCGYRL 453
Query: 349 CTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSD 405
C R ++ + + +LSL+ +++GE D +L WPF R+ L+ S + +I + + D
Sbjct: 454 CARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPD 513
Query: 406 KNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFKRP A G F+ VL+ + ++DDT +K V
Sbjct: 514 PNSSSFKRPDGEM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 560
>gi|402857264|ref|XP_003893186.1| PREDICTED: TNF receptor-associated factor 5 isoform 4 [Papio
anubis]
Length = 568
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 224/530 (42%), Gaps = 95/530 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCRSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYES-----------HVNTCYLKYSQPSVEDITD- 119
+RE+L + C C++++ + Y+ H+ C + Q S E+ +
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQQVPLACCYLLQDHLQQCLFQAVQCSNENCREP 158
Query: 120 ----------SPTSSFRNTSG-------IPTNKRN-----------------SKILTVTV 145
S FR + N +N +KI+ T
Sbjct: 159 VLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTE 218
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLE-KHYDLKTSFHLELLFNKYCSDGSQ 204
EHL + + ++ P K Y GC K + L E +H L+ H+ L+ K Q
Sbjct: 219 VDEHLAVCPEAEQDCPFKHY--GCAVTDKRRNLQEHEHSALRE--HMRLVLEKNVQLEEQ 274
Query: 205 STNTPSHGRQDTSNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKT 258
++ Q S +++ A +K E E ++L+ N + + + +S D S
Sbjct: 275 ISDLHKSLEQKESKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWL 333
Query: 259 CGDNSHLLKLV-------------------YERMVLLEQ-----SMLEQKIKVNNFELNL 294
LL++V +++ LLE ++LE++ ++ +N+
Sbjct: 334 EAQVHQLLQMVNQQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINI 393
Query: 295 KQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRF 348
+ + ++ KL NG WK+ ++ K +E + + +S FY+ GYR
Sbjct: 394 HKAQLNKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTGRCGYRL 453
Query: 349 CTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSD 405
C R ++ + + +LSL+ +++GE D +L WPF R+ L+ S + +I + + D
Sbjct: 454 CARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPD 513
Query: 406 KNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFKRP A G F+ VL+ + ++DDT +K V
Sbjct: 514 PNSSSFKRPDGEM--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 560
>gi|340370021|ref|XP_003383545.1| PREDICTED: TNF receptor-associated factor 3-like [Amphimedon
queenslandica]
Length = 525
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 207/507 (40%), Gaps = 79/507 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L R +C IC L+ + T CGH FC C++ I + + CP+D++ ++++D F DN
Sbjct: 12 LQRRHQCRICSLALRVPMQTECGHLFCKECVEP-IFRESQPLCPVDQEPISREDTFPDNA 70
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQ--------PSVE------- 115
+REIL + C ++ C + + E+H+ C + Q P +
Sbjct: 71 CKREILGLLVYCDHRDLGCDWTGELKKLEAHLLDCRYREIQCTQCGQLVPCAKLENHERN 130
Query: 116 DITDSPTSSFRNTSGIPT-------------------NKRNSKILTVTVFPEHLNMQGSS 156
+ P+ S +P N N K ++ +HL+M+
Sbjct: 131 ECPMRPSVCEHCLSKVPVEQLEAHIQRVCPKYLRSCPNSCNEKKYLLSELQQHLDMKTGD 190
Query: 157 N--ENFPCKFYQVGCREVFK-SQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR 213
E C ++ +GC FK + +E H K FH L + + ++T T
Sbjct: 191 CPLEIVECPYFPLGC--PFKHPRKEIEHHMKTKKVFHTRLHVDTTVACKREATETKKRAE 248
Query: 214 QDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGD-CSCKTCGDNSHLLKLVYE- 271
+ IE K+ + KL + SSE D K + +L Y
Sbjct: 249 ELIGRMSIIET---KSVALDRKLKSLESDIERAKGSSETDRLILKVNALEEKVARLQYSD 305
Query: 272 -----------RMVLLEQSMLEQKI-----KVNNFELNLKQ--TEEIEDNVVLKLC---- 309
+ S L Q++ KV+ + + Q + +E ++ L+
Sbjct: 306 KTNFFSHSHHGGGHSVPSSHLLQQVDQLYSKVSELDTTVTQCISNSMETDMRLQFVERAS 365
Query: 310 -NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSL 364
NG W++ NF +E + YS FY+S GY+ C RV ++ + +LSL
Sbjct: 366 YNGTMLWRIDNFSQHKQEAIDGTTLSLYSVPFYTSKQGYKMCARVYLNGDGLGKGTHLSL 425
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKA 423
F +++G D +L WPF ++ LN T + +I D+ + D SF+RPV +N A
Sbjct: 426 FFVVMRGPYDALLPWPFEQKVTLVLLNQTPGKRNIVDQFRPDPQSSSFQRPVKREMN-IA 484
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFV 450
G F R+ + D G++ +D F+
Sbjct: 485 SGCPRFCRLEQLKD---GYIKDDCIFL 508
>gi|405951022|gb|EKC18970.1| TNF receptor-associated factor 3 [Crassostrea gigas]
Length = 603
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 109/201 (54%), Gaps = 21/201 (10%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELN----LKQTEEIEDNVV---LKLCNGVYFWKMYNFPAK 323
E + E ++ + K KV E N +K+ + +E+ + + NGVYFW++ ++ +K
Sbjct: 403 ESLARHESALHDMKHKVEYHEKNNAALIKRVKSLENALTELEGRCSNGVYFWRIKSY-SK 461
Query: 324 LKEMKEINRY--FYSACFYSSCFGYRFCTRVNISREDAQ---YLSLFIHLVQGENDDILD 378
+ E +S FYSSCFGY+ C R N++ D+ +LS+F+H +QGE DDIL+
Sbjct: 462 FRNEAESGEVTAIHSPAFYSSCFGYKICIRANLNGVDSARGTHLSIFVHFMQGEYDDILE 521
Query: 379 WPFVGRIRFTAL--NTSSEFS--ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVAD 434
WPF GRI + L N + E + + + + +F+RP N K FG+ F+ ++
Sbjct: 522 WPFSGRIMLSVLDQNPTCELRSHVMETLVAKPTLAAFQRPTT-PRNHKGFGYMEFLPLS- 579
Query: 435 VLDPGRGFLMEDDTFVIKTQV 455
VLD + +DT +IK Q+
Sbjct: 580 VLD--NSSYIRNDTLIIKAQI 598
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYT 73
D +++C ICL L+D + T+CGH+FC CI+ W+ + CPID +T+ +F DN+
Sbjct: 50 DEKYDCPICLLVLRDPLQTTCGHRFCKNCINKWLK-ESDQRCPIDNMPITESQLFPDNFA 108
Query: 74 RREILENNLTCPYKQCSSQL--SIPEYESHVNTC 105
+REIL ++ CP + Q+ ++ + H++ C
Sbjct: 109 KREILGLSVKCPNSKEGCQVIETLKNIQRHLDEC 142
>gi|190689847|gb|ACE86698.1| TNF receptor-associated factor 2 protein [synthetic construct]
gi|190691215|gb|ACE87382.1| TNF receptor-associated factor 2 protein [synthetic construct]
Length = 476
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 177/434 (40%), Gaps = 53/434 (12%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDITDSP 121
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 122 TSSFRNTSGIPTNKRNSKILTVTV------FPEHLNMQGSSNENFPCKFYQVGCREVFKS 175
P + + F +H+ G PC+F+ +GC E +
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKFQDHVKTCGKCR--VPCRFHAIGCLETVEG 204
Query: 176 QA-------LLEKHYDLKTSFHLEL--LFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYL 226
+ L +H + S LE L GS+ + T+ + I L
Sbjct: 205 EKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVL 264
Query: 227 MKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
+ E + + Q D+ ++ + ++ LE+S+ + +
Sbjct: 265 NREVERVAMTAEACSRQHRLDQDK---------------IEALSSKVQQLERSIGLKDLA 309
Query: 287 VNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFG 345
+ + E ++ E+E + +GV+ WK+ +F K +E +S FY+S +G
Sbjct: 310 MADLE---QKVLEMEASTY----DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYG 362
Query: 346 YRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEI 402
Y+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+ ++ + D
Sbjct: 363 YKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAF 422
Query: 403 QSDKNFDSFKRPVN 416
+ D SF+RPVN
Sbjct: 423 RPDVTSSSFQRPVN 436
>gi|431899026|gb|ELK07396.1| TNF receptor-associated factor 2 [Pteropus alecto]
Length = 501
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 182/446 (40%), Gaps = 54/446 (12%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI----- 67
L+ ++ CS C L+ CGH++C+ C+ S + +N + + +D +
Sbjct: 28 LEDKYLCSACKNVLRRPFQAQCGHRYCSFCLSSILSSGPQNCAACVHEGIYEDGVSILES 87
Query: 68 ---FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT---- 118
F DN RRE+ CP C+ + ++ EYES H C ++ P+ + +
Sbjct: 88 SSAFPDNAARREVESLPAVCPNHGCTWKGTLKEYESYHEGHCPFMLTECPACKGLVRLSE 147
Query: 119 -------DSPTSSFR-NTSGIPTNKRNSKIL--TVTVFPEHLNMQGS--SNENF------ 160
+ P S G P + + + FP + GS E+F
Sbjct: 148 RDRHAERECPERSLSCQHCGAPCCRASVEAHHEVCPRFPVTCDDCGSRIPREDFQGHART 207
Query: 161 ------PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQ 214
PC+F+ VGC E+ +S+ E H + HL +L G+ + Q
Sbjct: 208 CGECRVPCRFHGVGCPEMVESEKQPE-HEAQRLREHLAMLLAVLLEAGALGSG--PQLCQ 264
Query: 215 DTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMV 274
+ EA K E+ + N+ ++E CG +L +R+
Sbjct: 265 AAELVRRCEALERKTATFENIVCVLNREVERVAMTAE------ACGRQH---RLDQDRIE 315
Query: 275 LLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRY 333
L + + + + +L L E+ ++ +GV WK+ F K +E +
Sbjct: 316 ALSNKVQQLERSIGLKDLALADLEQKVRDMEAATFDGVLIWKIPGFARKRQEAVAGRTPA 375
Query: 334 FYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+S +GY+ C R+ + + +LSLF +++G ND +L WPF ++ L
Sbjct: 376 IFSPAFYTSRYGYKMCLRIYLDGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLL 435
Query: 391 NTSSEFSITDEIQSDKNFDSFKRPVN 416
+ ++ + D + D SF+RPV
Sbjct: 436 DQNNREHVIDAFRPDVTSSSFQRPVT 461
>gi|31874596|emb|CAD98040.1| hypothetical protein [Homo sapiens]
Length = 500
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 177/434 (40%), Gaps = 53/434 (12%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 51 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 110
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDITDSP 121
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 111 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 170
Query: 122 TSSFRNTSGIPTNKRNSKILTVTV------FPEHLNMQGSSNENFPCKFYQVGCREVFKS 175
P + + F +H+ G PC+F+ +GC E +
Sbjct: 171 EKERHLEHECPERSLSCRHCRAPCCGADVKFQDHVKTCGKCR--VPCRFHAIGCLETVEG 228
Query: 176 QA-------LLEKHYDLKTSFHLEL--LFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYL 226
+ L +H + S LE L GS+ + T+ + I L
Sbjct: 229 EKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVL 288
Query: 227 MKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
+ E + + Q D+ ++ + ++ LE+S+ + +
Sbjct: 289 NREVERVAMTAEACSRQHRLDQDK---------------IEALSSKVQQLERSIGLKDLA 333
Query: 287 VNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFG 345
+ + E ++ E+E + +GV+ WK+ +F K +E +S FY+S +G
Sbjct: 334 MADLE---QKVLEMEASTY----DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYG 386
Query: 346 YRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEI 402
Y+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+ ++ + D
Sbjct: 387 YKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAF 446
Query: 403 QSDKNFDSFKRPVN 416
+ D SF+RPVN
Sbjct: 447 RPDVTSSSFQRPVN 460
>gi|449477756|ref|XP_002190587.2| PREDICTED: TNF receptor-associated factor 2 [Taeniopygia guttata]
Length = 452
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 174/420 (41%), Gaps = 51/420 (12%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ I G C I E +L
Sbjct: 28 LEVKYLCSDCKNILRRPFQAQCGHRYCSYCLKKIISA-GPQKCASCIQEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTS 123
F DN RRE+ C C+ + +I EYE ++
Sbjct: 87 TSSAFPDNAARREVESLPAVCINSGCNWKGTIKEYEVQAKA-------------RLGTSA 133
Query: 124 SFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHY 183
SF P ++ VF +H+ G S PC+F VGC EV +++ L E H
Sbjct: 134 SF-----FPLCLGKAQ----RVFRDHVKTCGRSK--VPCRFEAVGCAEVVENEKLPE-HE 181
Query: 184 DLKTSFHLELLFNKYCSDGSQSTNT---PSHGRQDTSNQKEIEAYLMKNKEHESKLWDPN 240
+ HL +L + S + + + PS + EA K E+ + N
Sbjct: 182 RKCLAEHLYMLMSSVLSLKTGAGDLKPLPSELSRSLELLGRCEALERKTVTFENIVCVLN 241
Query: 241 KNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI 300
+ ++E S +L E++ L + + + + +L + + EE
Sbjct: 242 REVERVSLTAEA---------YSRQHRLDQEKIETLSNKVRQLERSIGLKDLAMAEMEEK 292
Query: 301 EDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED- 358
N+ +GV+ WK+ F K +E + + +S FY+S +GY+ C RV ++ +
Sbjct: 293 IRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYKMCLRVYLNGDGT 352
Query: 359 --AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSLF +++G ND +L WPF ++ L+ ++ I D + D SF+RPV
Sbjct: 353 GRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPVT 412
>gi|403301448|ref|XP_003941401.1| PREDICTED: TNF receptor-associated factor 2 [Saimiri boliviensis
boliviensis]
Length = 501
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 185/451 (41%), Gaps = 64/451 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ + CGH++C+ C+ S + +N + +L
Sbjct: 28 LEAKYLCSACRNVLRRPVQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT---- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ PS + +
Sbjct: 88 SSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPSCKGLVRLGD 147
Query: 119 -------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLN 151
+ P S R+ + + K + F +H+
Sbjct: 148 KERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHIK 207
Query: 152 MQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSH 211
G PC+F+ +GC E +S+ E H HL +L N S +
Sbjct: 208 TCGKCR--VPCRFHALGCLETVESEKQQE-HEAQWLREHLAMLLNSVLEAKPLSGDQSQA 264
Query: 212 GRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE 271
G + + +E K E+ + N+ + E CS H L L
Sbjct: 265 GSELLQRCETLEK---KTATFENIVCVLNREVERVALTVEA-CS------RQHRLDLDRI 314
Query: 272 RMVLLEQSMLEQKIKVNNFEL-NLKQ-TEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
+ + LE+ I + + + +L+Q E+E + +GV+ WK+ +F K +E +
Sbjct: 315 EALSNKVQQLERSIGLKDLAMADLEQKVLEMEASTY----DGVFIWKISDFARKRQEAVA 370
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++
Sbjct: 371 GRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKV 430
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
L+ ++ + D + D SF+RPVN
Sbjct: 431 TLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|6755867|ref|NP_035763.1| TNF receptor-associated factor 5 [Mus musculus]
gi|1469893|dbj|BAA11218.1| TRAF5 [Mus musculus]
Length = 558
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 119/524 (22%), Positives = 216/524 (41%), Gaps = 93/524 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQQCIRSLRELNSVPICPVDKEVIKPQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L ++ C C++++ + ++ H+ C + E + S
Sbjct: 99 CKREVLNLHVYCKNAPGCNARIILGRFQDHLQHCSFQAVPCPNESCREAMLRKDVKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRNSKILTVTVFP-----------------EHLNMQGSS 156
FR + TN ++ + + +P EHL + +
Sbjct: 159 AYCRFREEKCLYCKRDIVVTNLQDHEENSCPAYPVSCPNRCVQTIPRARVNEHLTVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNK------YCSDGSQSTNTPS 210
++ P K Y GC K LLE H H+ L+ K SD QS
Sbjct: 219 EQDCPFKHY--GCTVKGKRGNLLE-HERAALQDHMLLVLEKNYQLEQRISDLYQSLEQKE 275
Query: 211 HGRQDTSN-----QKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL 265
Q + +KE++ + + + L + + DKS+ + + HL
Sbjct: 276 SKIQQLAETVKKFEKELKQFTQMFGRNGTFLSNVQALTSHTDKSAWLEAQVR------HL 329
Query: 266 LKLV-------------------YERMVLLEQS-----MLEQKIKVNNFELNLKQTEEIE 301
L++V +R+ LE S +LE + ++ +N+ + + +
Sbjct: 330 LQIVNQQPSRLDLRSLVDAVDSVKQRITQLEASDQRLVLLEGETSKHDAHINIHKAQLNK 389
Query: 302 DNVVLKLCNGVYF-----WKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNIS 355
+ K G + WK+ ++ K +E E + +S FY+S GYR C R ++
Sbjct: 390 NEERFKQLEGACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLN 449
Query: 356 REDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSF 411
+ + +LSL+ +++GE D +L WPF R+ L+ S + + I + ++D N SF
Sbjct: 450 GDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIVETFKADPNSSSF 509
Query: 412 KRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
KRP A G F+ L+ + ++DDT +K V
Sbjct: 510 KRPDGEM--NIASGCPRFVS-HSTLENSKNTYIKDDTLFLKVAV 550
>gi|395844238|ref|XP_003794869.1| PREDICTED: TNF receptor-associated factor 2 [Otolemur garnettii]
Length = 490
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 187/445 (42%), Gaps = 63/445 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKF----CAACIDSWIDVKGKNYCPIDEKVLTKDDIF 68
L+ ++ CS C L+ CGH+ CAAC+ I +G + +L F
Sbjct: 28 LEAKYLCSACRNVLRRPFQAQCGHRSGPQNCAACVHEGIYEEGVS-------ILESSSAF 80
Query: 69 IDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT-------- 118
DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 81 PDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKSLVRLGEKERH 140
Query: 119 ---DSPTSSF------RNTSGIPTNKRN--------------SKILTVTVFPEHLNMQGS 155
+ P S SG + K ++ F +H+ G
Sbjct: 141 LEHECPERSLSCRHCRAPCSGTDVKAHHEVCPKFPLTCEGCGKKKISREKFQDHIKTCGK 200
Query: 156 SNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
PC+F+ VGC+E + Q ++H HL +L + S + G +
Sbjct: 201 CR--VPCRFHTVGCQETVE-QEKQQEHEAQWLQGHLAMLLSSVLEAKPLSGDQSQVGSEI 257
Query: 216 TSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVL 275
+ EA K E+ + N+ ++E CS + D + L ++
Sbjct: 258 L---QRCEALERKTATFENIVCVLNREVERVAMTAEA-CSRQHRLDQDKIEAL-SNKVQQ 312
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYF 334
LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E +
Sbjct: 313 LERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQEAVTGRTPAI 365
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 366 FSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 425
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVN 416
++ + D + D SF+RPVN
Sbjct: 426 QNNREHVIDAFRPDVTSSSFQRPVN 450
>gi|194378088|dbj|BAG57794.1| unnamed protein product [Homo sapiens]
Length = 455
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 173/427 (40%), Gaps = 60/427 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSP-T 122
F DN RRE+ CP C+ + ++ EYES C + E P T
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYES----CCGADVKAHHEVCPKFPLT 142
Query: 123 SSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQA----- 177
IP K F +H+ G PC+F+ +GC E + +
Sbjct: 143 CDGCGKKKIPREK----------FQDHVKTCGKCR--VPCRFHAIGCLETVEGEKQQEHE 190
Query: 178 --LLEKHYDLKTSFHLEL--LFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE 233
L +H + S LE L GS+ + T+ + I L + E
Sbjct: 191 VQWLREHLAMLLSSVLEAKPLLGDQSHAGSELLQRCESLEKKTATFENIVCVLNREVERV 250
Query: 234 SKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELN 293
+ + Q D+ ++ + ++ LE+S+ + + + + E
Sbjct: 251 AMTAEACSRQHRLDQDK---------------IEALSSKVQQLERSIGLKDLAMADLE-- 293
Query: 294 LKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRV 352
++ E+E + +GV+ WK+ +F K +E +S FY+S +GY+ C R+
Sbjct: 294 -QKVLEMEASTY----DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRI 348
Query: 353 NISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFD 409
++ + +LSLF +++G ND +L WPF ++ L+ ++ + D + D
Sbjct: 349 YLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSS 408
Query: 410 SFKRPVN 416
SF+RPVN
Sbjct: 409 SFQRPVN 415
>gi|119608708|gb|EAW88302.1| TNF receptor-associated factor 2, isoform CRA_b [Homo sapiens]
Length = 503
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 164/417 (39%), Gaps = 47/417 (11%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 82 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 141
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTS 123
F DN RRE+ CP C+ + ++ EYE + C + P+V SP S
Sbjct: 142 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYEVKMPACGMVTEAPAVGSRPRSP-S 200
Query: 124 SFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHY 183
S+ +P + +++V E + S C C L EK
Sbjct: 201 SYDLVLHVPLTGAEACLMSVE---EETELLLRSCHEGRCPLMLTECPACKGLVRLGEKER 257
Query: 184 DLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQ 243
L+ L ++C + +H + K E D +K +
Sbjct: 258 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKHRLDQDKIE 317
Query: 244 AGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDN 303
A K + LE+S+ + + + + E ++ E+E +
Sbjct: 318 ALSSKVQQ------------------------LERSIGLKDLAMADLE---QKVLEMEAS 350
Query: 304 VVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---A 359
+GV+ WK+ +F K +E +S FY+S +GY+ C R+ ++ +
Sbjct: 351 TY----DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRG 406
Query: 360 QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+LSLF +++G ND +L WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 407 THLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 463
>gi|16549281|dbj|BAB70792.1| unnamed protein product [Homo sapiens]
Length = 447
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 168/423 (39%), Gaps = 60/423 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTS 123
F DN RRE+ CP C+ + ++ EYE + C + P+V SP S
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYEVKMPACGMVTEAPAVGSRPRSP-S 145
Query: 124 SFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHY 183
S+ +P + +++V E + S C C L EK
Sbjct: 146 SYDLVLHVPLTGAEACLMSVE---EETELLLRSCHEGRCPLMLTECPACKGLVRLGEKER 202
Query: 184 DLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLM------KNKEHESKLW 237
L+ L ++C P G ++ + + + K K K
Sbjct: 203 HLEHECPERSLSCRHC-------RAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQ 255
Query: 238 DPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQT 297
D +K +A K + LE+S+ + + + + E ++
Sbjct: 256 DQDKIEALSSKVQQ------------------------LERSIGLKDLAMADLE---QKV 288
Query: 298 EEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISR 356
E+E + +GV+ WK+ +F K +E +S FY+S +GY+ C R+ ++
Sbjct: 289 LEMEASTY----DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNG 344
Query: 357 ED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKR 413
+ +LSLF +++G ND +L WPF ++ L+ ++ + D + D SF+R
Sbjct: 345 DGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQR 404
Query: 414 PVN 416
PVN
Sbjct: 405 PVN 407
>gi|85687488|gb|ABC73694.1| TRAF6 [Azumapecten farreri]
Length = 655
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 19/198 (9%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELN-------LKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
E + EQS++E + K + E +K E ++ + CNG Y WK+ N+
Sbjct: 455 ESLARHEQSLVEIQQKNDTLERTNRDLRSKVKNLESTVADIEGRTCNGTYLWKIKNYSKF 514
Query: 324 LKEMKEINR-YFYSACFYSSCFGYRFCTRVNISREDAQ---YLSLFIHLVQGENDDILDW 379
+E + + +S FYS+ +GY+ C RVN++ D+ +LS+FIH +QGE DDIL+W
Sbjct: 515 RREAEHGDTTAIHSPPFYSNFYGYKLCIRVNLNGVDSARGTHLSVFIHFMQGEYDDILEW 574
Query: 380 PFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
PF GRI T L+ + + + + S + +F++PV N K FG+ F+ + +
Sbjct: 575 PFSGRIVLTVLDQNPVCEQRHHVIETLVSKPHLAAFQKPVT-PRNHKGFGYMEFLPLG-I 632
Query: 436 LDPGRGFLMEDDTFVIKT 453
LD +++DT +IK
Sbjct: 633 LD--NSTYIQNDTLLIKA 648
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWI-DVKGKNYCPIDEKVLTKDDIFIDNYTR 74
+++C ICL L+D T CGH+FC CI W+ + + + CP+D L + IF DN+ +
Sbjct: 90 KYDCPICLLVLRDPYQTECGHRFCQNCIKRWLRETESEPRCPVDNAPLGEGQIFPDNFAK 149
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKY 109
REIL + CP + C +Q+ + + + H+++C +
Sbjct: 150 REILALLVKCPNHKDGCDTQVVLKQLQKHLDSCEFSF 186
>gi|407971937|gb|AFU52971.1| tumor necrosis factor receptor-associated factor 6 [Mizuhopecten
yessoensis]
Length = 657
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 19/198 (9%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELN-------LKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
E + EQS++E + K + E +K E ++ + CNG Y WK+ N+
Sbjct: 457 ESLARHEQSLVEIQQKNDTLERTNRDLRSKVKNLESTIADIEGRTCNGTYLWKIKNYSKF 516
Query: 324 LKEMKEINR-YFYSACFYSSCFGYRFCTRVNISREDAQ---YLSLFIHLVQGENDDILDW 379
+E + + +S FYS+ +GY+ C RVN++ D+ +LS+FIH +QGE DDIL+W
Sbjct: 517 RREAEHGDTTAIHSPPFYSNFYGYKLCIRVNLNGVDSARGTHLSVFIHFMQGEYDDILEW 576
Query: 380 PFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
PF GRI T L+ + + + + S+ + +F++PV N K FG+ F+ + ++
Sbjct: 577 PFSGRIVLTVLDQNPVCEQRHHVIETLVSEPHLAAFQKPVT-PRNHKGFGYMEFLPL-NI 634
Query: 436 LDPGRGFLMEDDTFVIKT 453
LD + DT +IK
Sbjct: 635 LD--NSTYIRSDTLLIKA 650
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWI-DVKGKNYCPIDEKVLTKDDIFIDNYTR 74
+++C ICL L++ T CGH+FC CI W+ + + + CP+D L + IF DN+ +
Sbjct: 92 KYDCPICLLVLREPYQTECGHRFCQNCIKRWLRETESEPRCPVDNAPLGEGQIFPDNFAK 151
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKY 109
REIL + CP + C +Q+ + + + H+NTC +
Sbjct: 152 REILALLVQCPNHKDGCDTQVVLKQLKKHLNTCEFAF 188
>gi|410979527|ref|XP_003996135.1| PREDICTED: TNF receptor-associated factor 2 [Felis catus]
Length = 501
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 184/452 (40%), Gaps = 72/452 (15%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTKDDI 67
++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 31 KYLCSACRNVLRRPFQAQCGHRYCSYCLTSILSSGPQNCAACVHEGIYEEGISILESGSA 90
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT------- 118
F DN RRE+ CP C+ + ++ EYES H C ++ P+ +
Sbjct: 91 FPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGHCPFMLTECPACRGLVRLGEKER 150
Query: 119 ----DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLNMQG 154
+ P S R+ + + K ++ F +H+ G
Sbjct: 151 HSEQECPERSLSCRHCRAPCCWADLKAHHEVCPKFPLTCDGCGKKKISREKFQDHVRACG 210
Query: 155 SSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQ 214
PC+F VGC E+ +S+ ++H HL +L G PS
Sbjct: 211 RCR--VPCRFRAVGCAEMVESEKQ-QQHEAQWLREHLAMLLG-----GLLEARHPSGAEL 262
Query: 215 DTSNQ--KEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL----LKL 268
+ + + EA K E+ + N+ ++E CG L ++
Sbjct: 263 PKAAELRQRCEALERKTATFENIVCVLNREVERVAMTAE------ACGRQHRLDQDRIEA 316
Query: 269 VYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-M 327
+ ++ LE+S+ + + + E ++ E+E + +GV+ WK+ +F K +E +
Sbjct: 317 LSNKVQQLERSIGLKDLAMAELE---QKVHEMEASTF----DGVFIWKISDFARKRQEAV 369
Query: 328 KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGR 384
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF +
Sbjct: 370 AGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQK 429
Query: 385 IRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+ L+ ++ + D + D SF+RPV+
Sbjct: 430 VTLMLLDQNNREHVIDAFRPDVTSSSFQRPVS 461
>gi|73967511|ref|XP_857289.1| PREDICTED: TNF receptor-associated factor 2 isoform 5 [Canis lupus
familiaris]
Length = 501
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 181/446 (40%), Gaps = 60/446 (13%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTKDDI 67
++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 31 KYLCSACRNVLRRPFQAQCGHRYCSYCLSSILSSGPQNCAACVHEGIYEEGISILESSSA 90
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT------- 118
F DN RRE+ CP C+ + ++ EYES H C ++ P+ + +
Sbjct: 91 FPDNAARREVESLPAVCPNNGCTWKGTLKEYESCHEGHCPFMLTECPACKGLVRLGEKEH 150
Query: 119 ----DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLNMQG 154
+ P S R+ + + K ++ F +H+ G
Sbjct: 151 HSEHECPERSLSCRHCRAPCCWADLKAHHEVCPKFPLTCDGCGKKKISREKFQDHVRACG 210
Query: 155 SSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQ 214
PC+F+ VGC E+ +S+ ++H HL +L S S +
Sbjct: 211 KCR--VPCRFHVVGCPEMVESEKQ-QQHEAHWLREHLAMLLGSLLEAKHLSGAELS---K 264
Query: 215 DTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMV 274
Q+ EA K E+ + N+ ++E CG L + +R+
Sbjct: 265 AAELQQRCEALERKTATFENIVCVLNREVERVAMTAEA------CGRQHQLDQ---DRIE 315
Query: 275 LLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRY 333
L + + + + +L + + E+ + +GV+ WK+ +F K +E +
Sbjct: 316 ALSNKVQQLERTIGLKDLAMAELEQKVHEMEASTFDGVFIWKISDFARKRQEAVAGRTPA 375
Query: 334 FYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L
Sbjct: 376 IFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLL 435
Query: 391 NTSSEFSITDEIQSDKNFDSFKRPVN 416
+ ++ + D + D SF+RPV+
Sbjct: 436 DQNNREHVIDAFRPDVTSSSFQRPVS 461
>gi|380788563|gb|AFE66157.1| TNF receptor-associated factor 2 [Macaca mulatta]
Length = 501
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 184/458 (40%), Gaps = 78/458 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 28 LEAKYLCSACGNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT---- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 88 SSAFPDNAARREVESLPAACPIDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGE 147
Query: 119 -------DSPTSSFR---------NTSG-----------IPTNKRNSKILTVTVFPEHLN 151
+ P S G + + K + F +H+
Sbjct: 148 KERHLEHECPERSLSCRHCRAPCCGADGKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVK 207
Query: 152 MQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSDG 202
G PC+F+ +GC E + + L +H + S LE L G
Sbjct: 208 TCGKCR--IPCRFHAIGCLETVEGEKQQEHEAQWLREHLAMLLSSVLEAKPLLGDQSHAG 265
Query: 203 SQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDN 262
S+ + + T+ + I L + E + + Q D+
Sbjct: 266 SELLQRCENLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK------------ 313
Query: 263 SHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPA 322
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F
Sbjct: 314 ---IEALSNKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFAR 363
Query: 323 KLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILD 378
K +E + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 364 KRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLR 423
Query: 379 WPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 424 WPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|109109693|ref|XP_001092078.1| PREDICTED: TNF receptor-associated factor 2-like isoform 1 [Macaca
mulatta]
gi|109109695|ref|XP_001092203.1| PREDICTED: TNF receptor-associated factor 2-like isoform 2 [Macaca
mulatta]
gi|383412881|gb|AFH29654.1| TNF receptor-associated factor 2 [Macaca mulatta]
gi|384941730|gb|AFI34470.1| TNF receptor-associated factor 2 [Macaca mulatta]
gi|387542130|gb|AFJ71692.1| TNF receptor-associated factor 2 [Macaca mulatta]
Length = 501
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 184/458 (40%), Gaps = 78/458 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 28 LEAKYLCSACGNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT---- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 88 SSAFPDNAARREVESLPAVCPIDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGE 147
Query: 119 -------DSPTSSFR---------NTSG-----------IPTNKRNSKILTVTVFPEHLN 151
+ P S G + + K + F +H+
Sbjct: 148 KERHLEHECPERSLSCRHCRAPCCGADGKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVK 207
Query: 152 MQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSDG 202
G PC+F+ +GC E + + L +H + S LE L G
Sbjct: 208 TCGKCR--IPCRFHAIGCLETVEGEKQQEHEAQWLREHLAMLLSSVLEAKPLLGDQSHAG 265
Query: 203 SQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDN 262
S+ + + T+ + I L + E + + Q D+
Sbjct: 266 SELLQRCENLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK------------ 313
Query: 263 SHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPA 322
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F
Sbjct: 314 ---IEALSNKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFAR 363
Query: 323 KLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILD 378
K +E + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 364 KRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLR 423
Query: 379 WPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 424 WPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|410903894|ref|XP_003965428.1| PREDICTED: TNF receptor-associated factor 2-like [Takifugu
rubripes]
Length = 520
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 206/517 (39%), Gaps = 83/517 (16%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC--------- 55
P++ + ++ +++C CL+ L+ + CGH+FC C + G C
Sbjct: 16 PLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCIHCFKE-LTSSGPKPCEACRQEEIY 74
Query: 56 --PIDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLK---- 108
PI VL +++F DN REI C + CS SI +YE+ H C L+
Sbjct: 75 EEPIS--VLNSNEVFPDNAAGREIASLPARCLNQGCSWTGSIKQYEAQHEGRCELEQIKC 132
Query: 109 -YSQPSV---------EDITDSPTSS---------FRNTSG---------IPTNKRNSKI 140
Q SV E ++ T + F++ +P K
Sbjct: 133 DACQASVLRAEIDRHNERECEARTLNCKYCKLTFHFKDIKAHDDICLKFPLPCKDCGKKK 192
Query: 141 LTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCS 200
+ F EH+ S C F +VGC+ V + L E H T HL LL S
Sbjct: 193 IPREKFNEHIRSCAKSKS--ACPFSEVGCKSVVDNGKLRE-HEHSSTVEHLHLLLPMVLS 249
Query: 201 DGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCG 260
T T + + Q++ L + E + A + + +
Sbjct: 250 ----LTRTRAEVSESGEWQEDSGLGLYRAPEEGVNV---GAGAAASVHAVDLEKKVTALE 302
Query: 261 DNSHLLKLVYERMVL----------LEQSMLEQKI-KVNNFE-------LNLKQTEEIED 302
+ +L ER L L+Q +E + KV E L L +TE++
Sbjct: 303 NIICVLNREVERSALKVEAFAHQHCLDQEKIENLVSKVGQLERAIAMRDLQLSETEQMVR 362
Query: 303 NVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNISRED--- 358
+ +G++ WK+ F + +E + +S FYSS +GY+ C R+ ++ +
Sbjct: 363 ELQSCTYDGIFVWKISEFSRRRQEAVAVRMPTMFSPAFYSSKYGYKMCLRLYLNGDGTGR 422
Query: 359 AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFF 418
+LSLF +++G+ D +L WPF ++ L+ ++ I D + D SF+RP++
Sbjct: 423 GTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPISEM 482
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F +A + G+ ++DDT IK V
Sbjct: 483 --NIASGCPLFCPLAKL--AGKSPYLKDDTIFIKAIV 515
>gi|332833381|ref|XP_003312462.1| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 2
[Pan troglodytes]
gi|410219434|gb|JAA06936.1| TNF receptor-associated factor 2 [Pan troglodytes]
gi|410254906|gb|JAA15420.1| TNF receptor-associated factor 2 [Pan troglodytes]
gi|410288254|gb|JAA22727.1| TNF receptor-associated factor 2 [Pan troglodytes]
gi|410328611|gb|JAA33252.1| TNF receptor-associated factor 2 [Pan troglodytes]
Length = 501
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 68/454 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
G PC+F+ +GC E + + E H HL +L + S +
Sbjct: 207 KTCGKCR--VPCRFHAIGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLEAKPLSGDQSH 263
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL----L 266
G + + +E K E+ + N+ ++E C L +
Sbjct: 264 AGSELLQRCESLEK---KTATFENIVCVLNREVERVAMTAE------ACSRQHRLDQDKI 314
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E
Sbjct: 315 EALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQE 367
Query: 327 -MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFV 382
+ +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 368 AVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN 427
Query: 383 GRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPVN
Sbjct: 428 QKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|332261563|ref|XP_003279839.1| PREDICTED: TNF receptor-associated factor 2 isoform 1 [Nomascus
leucogenys]
gi|332261565|ref|XP_003279840.1| PREDICTED: TNF receptor-associated factor 2 isoform 2 [Nomascus
leucogenys]
Length = 501
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 68/454 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHI 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
G PC+F+ +GC E + + E H HL +L + S +
Sbjct: 207 KTCGKCR--VPCRFHAIGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLEAKPLSGDQSH 263
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL----L 266
G + + +E K E+ + N+ ++E C L +
Sbjct: 264 VGSELLQRCESLEK---KTATFENIVCVLNREVERVAMTAEA------CSRQHRLDQDKI 314
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E
Sbjct: 315 EALSNKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQE 367
Query: 327 -MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFV 382
+ +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 368 AVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN 427
Query: 383 GRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPVN
Sbjct: 428 QKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|395741218|ref|XP_003777545.1| PREDICTED: TNF receptor-associated factor 2 [Pongo abelii]
Length = 501
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 68/454 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
G PC+F+ +GC E + + E H HL +L + S +
Sbjct: 207 KTCGKCR--VPCRFHAIGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLEAKPLSGDQSH 263
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL----L 266
G + + +E K E+ + N+ ++E C L +
Sbjct: 264 AGSELLQRCESLEN---KTATFENIVCVLNREVERVAMTAE------ACSRQHRLDQDKI 314
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E
Sbjct: 315 EALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQE 367
Query: 327 -MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFV 382
+ +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 368 AVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN 427
Query: 383 GRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPVN
Sbjct: 428 QKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|397492222|ref|XP_003817026.1| PREDICTED: TNF receptor-associated factor 2 [Pan paniscus]
Length = 557
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 68/454 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 83 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 142
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 143 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 202
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 203 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 262
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
G PC+F+ +GC E + + E H HL +L + S +
Sbjct: 263 KTCGKCR--VPCRFHAIGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLEAKPLSGDQSH 319
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL----L 266
G + + +E K E+ + N+ ++E C L +
Sbjct: 320 AGSELLQRCESLEK---KTATFENIVCVLNREVERVAMTAEA------CSRQHRLDQDKI 370
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E
Sbjct: 371 EALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQE 423
Query: 327 -MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFV 382
+ +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 424 AVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN 483
Query: 383 GRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPVN
Sbjct: 484 QKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 517
>gi|402896022|ref|XP_003911107.1| PREDICTED: TNF receptor-associated factor 2 isoform 1 [Papio
anubis]
gi|402896024|ref|XP_003911108.1| PREDICTED: TNF receptor-associated factor 2 isoform 2 [Papio
anubis]
Length = 501
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 184/458 (40%), Gaps = 78/458 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 28 LEAKYLCSACGNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT---- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 88 SSAFPDNAARREVESLPAVCPIDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGE 147
Query: 119 -------DSPTSSFR---------NTSG-----------IPTNKRNSKILTVTVFPEHLN 151
+ P S G + + K + F +H+
Sbjct: 148 KERHLEHECPERSLSCRHCRAPCCGADGKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVK 207
Query: 152 MQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSDG 202
G PC+F+ +GC E + + L +H + S LE L G
Sbjct: 208 TCGKCR--VPCRFHAIGCLETVEGEKQQEHEAQWLREHLAMLLSSVLEAKPLLGDQSHVG 265
Query: 203 SQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDN 262
S+ + + T+ + I L + E + + Q D+
Sbjct: 266 SELLQRCENLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDR------------ 313
Query: 263 SHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPA 322
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F
Sbjct: 314 ---IEALSNKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFAR 363
Query: 323 KLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILD 378
K +E + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 364 KRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLR 423
Query: 379 WPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 424 WPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|332261567|ref|XP_003279841.1| PREDICTED: TNF receptor-associated factor 2 isoform 3 [Nomascus
leucogenys]
Length = 532
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 185/454 (40%), Gaps = 68/454 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 58 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 117
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 118 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 177
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 178 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHI 237
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
G PC+F+ +GC E + + E H HL +L + S +
Sbjct: 238 KTCGKCR--VPCRFHAIGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLEAKPLSGDQSH 294
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL----L 266
G + + +E K E+ + N+ ++E C L +
Sbjct: 295 VGSELLQRCESLEK---KTATFENIVCVLNREVERVAMTAE------ACSRQHRLDQDKI 345
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E
Sbjct: 346 EALSNKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQE 398
Query: 327 -MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFV 382
+ +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 399 AVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN 458
Query: 383 GRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPVN
Sbjct: 459 QKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 492
>gi|322791422|gb|EFZ15854.1| hypothetical protein SINV_05766 [Solenopsis invicta]
Length = 176
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
N K ++PRFEC ICL +L++ +LTSCGHKFC+ CI +W+ KG CP+D + L +D+
Sbjct: 29 NIKGYVEPRFECPICLTWLRNPVLTSCGHKFCSQCIHTWLKKKGA-CCPVDGQPLKSEDL 87
Query: 68 FIDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLK 108
F D YT REI + +C Y+Q C +LS + E H+ C K
Sbjct: 88 FPDLYTSREISQKRTSCVYQQFGCEVKLSPVDMEMHITQCTYK 130
>gi|157821941|ref|NP_001101285.1| TNF receptor-associated factor 2 [Rattus norvegicus]
gi|149039348|gb|EDL93568.1| Tnf receptor-associated factor 2 (predicted) [Rattus norvegicus]
gi|197246497|gb|AAI69064.1| Tnf receptor-associated factor 2 [Rattus norvegicus]
Length = 497
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 196/493 (39%), Gaps = 76/493 (15%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI---- 67
L+ ++ CS C L+ CGH++C+ C+ S + +N + L ++ I
Sbjct: 27 RLEAKYLCSACRNILRRPFQAQCGHRYCSFCLTSILSSGPQNCAACVHEGLYEEGISILE 86
Query: 68 ----FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITDSP 121
F DN RRE+ CP C+ + ++ EYES H C +L P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFLLTECPACKGLVRLS 146
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFP-------------------- 161
P + + L + FP
Sbjct: 147 EKKHHTEQECPKRSLSCQHCRAPCSHADLELHYEVCPKFPLTCDGCGKKISQEKLQDHVR 206
Query: 162 --------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYC-SDGSQSTNTPSHG 212
C+F+ +GC E+ +++ L + H + HL LL + + S SQ+ P
Sbjct: 207 TCSKCRVLCRFHAIGCSELVETEDL-QDHELQRLREHLALLLSSFLESQASQNQVGPELL 265
Query: 213 R------QDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLL 266
+ Q + + I L + E + + Q D+ +
Sbjct: 266 QRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDK---------------I 310
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E
Sbjct: 311 EALSNKVQQLERSIGLKDLAMADLE---QKVSELEVSTY----DGVFIWKISDFARKRQE 363
Query: 327 -MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFV 382
+ +S F++S +GY+ C RV ++ + +LSLF +++G ND +L WPF
Sbjct: 364 AIAGRTPAIFSPAFFTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPFN 423
Query: 383 GRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGF 442
++ L+ ++ + D + D SF+RPV+ A G F V+ + +
Sbjct: 424 QKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVSDM--NIASGCPLFCPVSKI--EAKNS 479
Query: 443 LMEDDTFVIKTQV 455
+ DD IK V
Sbjct: 480 YVRDDAIFIKAIV 492
>gi|302563493|ref|NP_001181721.1| TRAF family member-associated NF-kappa-B activator [Macaca mulatta]
Length = 490
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 183/454 (40%), Gaps = 81/454 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKF----CAACIDSWIDVKGKNYCPIDEKVLTKDDIF 68
L+ ++ CS C L+ CGH+ CAAC+ I +G + +L F
Sbjct: 28 LEAKYLCSACGNVLRRPFQAQCGHRSGPQNCAACVHEGIYEEGIS-------ILESSSAF 80
Query: 69 IDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT-------- 118
DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 81 PDNAARREVESLPAVCPIDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKERH 140
Query: 119 ---DSPTSSFR---------NTSG-----------IPTNKRNSKILTVTVFPEHLNMQGS 155
+ P S G + + K + F +H+ G
Sbjct: 141 LEHECPERSLSCRHCRAPCCGADGKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCGK 200
Query: 156 SNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSDGSQST 206
PC+F+ +GC E + + L +H + S LE L GS+
Sbjct: 201 CR--IPCRFHAIGCLETVEGEKQQEHEAQWLREHLAMLLSSVLEAKPLLGDQSHAGSELL 258
Query: 207 NTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLL 266
+ + T+ + I L + E + + Q D+ +
Sbjct: 259 QRCENLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK---------------I 303
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E
Sbjct: 304 EALSNKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQE 356
Query: 327 -MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFV 382
+ +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 357 AVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN 416
Query: 383 GRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPVN
Sbjct: 417 QKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 450
>gi|338720159|ref|XP_001497958.3| PREDICTED: TNF receptor-associated factor 2 [Equus caballus]
Length = 516
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 192/467 (41%), Gaps = 81/467 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 28 LEDKYLCSACKNVLRRPFQAQCGHRYCSYCLTSILSSGPQNCAACVHEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT---- 118
F DN RRE+ CP C+ + ++ EYES H C ++ P+ + +
Sbjct: 88 SSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGHCPFMLTECPACKGLVRLGE 147
Query: 119 -------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLN 151
+ P S R+ + + K ++ F +H+
Sbjct: 148 KEHHLEHECPERSLSCRHCRAPCCWADMKAHHDVCPKFPLTCDGCGKKKISREKFQDHVR 207
Query: 152 MQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLE---LLFNKYCSD 201
G PC+F+ VGC E+ +S+ L++H + L+ LL +
Sbjct: 208 TCGKCR--VPCRFHAVGCPEMVESEKQQEHEAKWLQEHLAMLLGVLLDTKHLLGDSSSFL 265
Query: 202 GSQSTNTPSHGRQDTSNQKEI----EAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCK 257
G P + S E+ EA K E+ + N+ ++E
Sbjct: 266 GQSQVGNPG---AEVSKAAELLQRCEALERKTATFENIVCVLNREVERVAMTAE------ 316
Query: 258 TCGDNSHL----LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVY 313
CG L ++ + ++ LE+S+ + + + + E ++ E+E + +GV+
Sbjct: 317 ACGRQHRLDQDRIEALSNKVQQLERSIGLKDLAMADLE---QKVHEMEASTF----DGVF 369
Query: 314 FWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLV 369
WK+ +F K +E + +S FY+S +GY+ C R+ ++ + ++SLF ++
Sbjct: 370 IWKISDFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHVSLFFVVM 429
Query: 370 QGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+G ND +L WPF ++ L+ ++ + D + D SF+RPV+
Sbjct: 430 KGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVS 476
>gi|126302645|ref|XP_001366797.1| PREDICTED: TNF receptor-associated factor 2 isoform 1 [Monodelphis
domestica]
Length = 508
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 191/453 (42%), Gaps = 61/453 (13%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C+ S I +N ++ +L
Sbjct: 28 LEDKYLCSACKNILRRPFQAQCGHRYCSYCLTSIISTGPQNCAACIQEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVE---DITD 119
F DN RRE+ C C+ + +I EYES H C ++ P+ + + +
Sbjct: 88 SSAFPDNAARREVESLPAVCVNDGCTWKGTIKEYESCHEGHCSFMLIECPACKWMIKLGE 147
Query: 120 SPTSSFRNTSGIPTNKRNSKIL-----------TVTVFPEHLNMQGSSNENF-------- 160
S R N R K L FP L +G +
Sbjct: 148 KEHHSERECPKRSLNCRYCKALFYYPDIKAHDEICPKFP--LTCEGCGKKKILREKFQDH 205
Query: 161 ---------PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSH 211
PCKF+ VGC E+ +++ + H + K + HL +L N +
Sbjct: 206 VKACGKCKGPCKFHVVGCTEMVENEKQ-QDHENQKVAEHLCMLLNFVLEARHFHGDIGPL 264
Query: 212 GRQDTSNQKEI----EAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLK 267
Q+ S E+ E K E+ + N+ ++E CS + D + +
Sbjct: 265 LGQEMSKSTELLERCETLERKTVTFENIVCVLNREVERVSMTAEA-CSRQHRLDQEKI-E 322
Query: 268 LVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE- 326
+ ++ LE+S+ + + + + E ++ E+E + +G++ WK+ +F K +E
Sbjct: 323 TLSSKVQQLERSIGLKDLAMADME---QKILEMEASTY----DGIFIWKITDFARKRQEA 375
Query: 327 MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVG 383
M + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 376 MAGRSPAIFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQ 435
Query: 384 RIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPV+
Sbjct: 436 KVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVS 468
>gi|335773205|gb|AEH58315.1| TNF receptor-associated factor 6-like protein, partial [Equus
caballus]
Length = 339
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q I V+ + ++ E+ + + CNG+Y WK+ NF LK +E
Sbjct: 133 LTAKMETQSIYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVI 192
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 193 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 252
Query: 391 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
+ SE I +EI K +F+RP N K FG+ F+ + + R F+ +D
Sbjct: 253 D-QSEAPIRQNHEEIMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KD 307
Query: 447 DTFVIKTQVT 456
DT +++ +V+
Sbjct: 308 DTLLVRCEVS 317
>gi|190689883|gb|ACE86716.1| TNF receptor-associated factor 2 protein [synthetic construct]
Length = 501
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 183/459 (39%), Gaps = 78/459 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSD 201
G PC+F+ +GC E + + L +H + S LE L
Sbjct: 207 KTCGKCR--VPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHA 264
Query: 202 GSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGD 261
GS+ + T+ + I L + E + + Q D+
Sbjct: 265 GSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK----------- 313
Query: 262 NSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFP 321
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F
Sbjct: 314 ----IEALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFA 362
Query: 322 AKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDIL 377
K +E +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 363 RKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALL 422
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 423 RWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|22027612|ref|NP_066961.2| TNF receptor-associated factor 2 [Homo sapiens]
gi|23503103|sp|Q12933.2|TRAF2_HUMAN RecName: Full=TNF receptor-associated factor 2; AltName: Full=E3
ubiquitin-protein ligase TRAF2; AltName: Full=Tumor
necrosis factor type 2 receptor-associated protein 3
gi|21619570|gb|AAH32410.1| TNF receptor-associated factor 2 [Homo sapiens]
gi|21708064|gb|AAH33810.1| TNF receptor-associated factor 2 [Homo sapiens]
gi|28175372|gb|AAH43492.1| TNF receptor-associated factor 2 [Homo sapiens]
gi|40352702|gb|AAH64662.1| TNF receptor-associated factor 2 [Homo sapiens]
gi|47419893|gb|AAT27320.1| TNF receptor-associated factor 2 [Homo sapiens]
gi|61364126|gb|AAX42494.1| TNF receptor-associated factor 2 [synthetic construct]
gi|119608705|gb|EAW88299.1| TNF receptor-associated factor 2, isoform CRA_a [Homo sapiens]
gi|119608706|gb|EAW88300.1| TNF receptor-associated factor 2, isoform CRA_a [Homo sapiens]
gi|119608707|gb|EAW88301.1| TNF receptor-associated factor 2, isoform CRA_a [Homo sapiens]
gi|123993881|gb|ABM84542.1| TNF receptor-associated factor 2 [synthetic construct]
gi|123996177|gb|ABM85690.1| TNF receptor-associated factor 2 [synthetic construct]
gi|158260467|dbj|BAF82411.1| unnamed protein product [Homo sapiens]
gi|190691255|gb|ACE87402.1| TNF receptor-associated factor 2 protein [synthetic construct]
gi|261860182|dbj|BAI46613.1| TNF receptor-associated factor 2 [synthetic construct]
Length = 501
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 183/459 (39%), Gaps = 78/459 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSD 201
G PC+F+ +GC E + + L +H + S LE L
Sbjct: 207 KTCGKCR--VPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHA 264
Query: 202 GSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGD 261
GS+ + T+ + I L + E + + Q D+
Sbjct: 265 GSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK----------- 313
Query: 262 NSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFP 321
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F
Sbjct: 314 ----IEALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFA 362
Query: 322 AKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDIL 377
K +E +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 363 RKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALL 422
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 423 RWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|256665402|gb|ACV04846.1| tumor necrosis factor receptor-associated factor 2 [Oplegnathus
fasciatus]
Length = 520
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 196/505 (38%), Gaps = 59/505 (11%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGK--NYCPIDE--- 59
P++ + ++ +++C CL+ L+ + CGH+FC C K C +E
Sbjct: 16 PLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSSGPKPCEACRQEEIYE 75
Query: 60 ---KVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQPSVE 115
+L ++ F DN REI C + C SI EYE+ H C + Q
Sbjct: 76 EPISILNSNEAFPDNAAGREIASLPARCLNQGCDWTGSIKEYEAQHEGRCEFERIQCEAC 135
Query: 116 DITDSPTSSFR-NTSGIPTNKRNSKILTVTV--------------FPEHLNMQGSS---N 157
+ T R N N K +T FP G
Sbjct: 136 QTSILRTDKDRHNERECEARTLNCKYCKITFNFKDIKAHDEICLKFPLQCKECGKKKIPR 195
Query: 158 ENF------------PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQS 205
E F C F +VGC+ V + L H T HL LL S
Sbjct: 196 EKFNDHSRSCAKSKSACPFNEVGCKSVIDN-GKLSDHEHSSTMEHLRLLLPMVLSMARPR 254
Query: 206 TNTPSHG--RQDTS----NQKEIEAYLMKNKEHESKLWDPNKNQAGDDK-----SSEGDC 254
+ P G ++D+ E + + D K + + E +
Sbjct: 255 ADAPGPGEWQEDSGLGLYRAPEEGVNMGAGAAASGQSVDIEKKVNALENIVCVLNREVER 314
Query: 255 SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF 314
S T SH +L E++ L + + + + +L L +TE++ + +G++
Sbjct: 315 SSVTMEAFSHQHRLDQEKIENLSNKVRQLERTLTMKDLQLSETEQLLRELQFCTYDGIFV 374
Query: 315 WKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQ 370
WK+ +F + ++ + +S FYSS +GY+ C R+ ++ + +LSLF +++
Sbjct: 375 WKISDFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMR 434
Query: 371 GENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFI 430
G+ D +L WPF ++ L+ ++ I D + D SF+RP++ A G F
Sbjct: 435 GKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPISEM--NIASGCPLFC 492
Query: 431 RVADVLDPGRGFLMEDDTFVIKTQV 455
+A + G+ + DDT IK V
Sbjct: 493 PLAKL--AGKSPYLRDDTIFIKAIV 515
>gi|395506466|ref|XP_003757553.1| PREDICTED: TNF receptor-associated factor 2 isoform 1 [Sarcophilus
harrisii]
Length = 502
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 193/453 (42%), Gaps = 67/453 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C+ S I +N ++ +L
Sbjct: 28 LEDKYLCSACKNILRRPFQAQCGHRYCSYCLTSIISTGPQNCAACIQEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVE---DITD 119
F DN RRE+ C C+ + +I EYES H C ++ P+ + + +
Sbjct: 88 SSAFPDNAARREVESLPAICVNDGCTWKGTIKEYESCHEGHCPFMLIECPACKWMIKLGE 147
Query: 120 SPTSSFRNTSGIPTNKRNSKIL-----------TVTVFPEHLNMQGSSNENF-------- 160
S R N R K L FP L +G +
Sbjct: 148 KEHHSERECPKRSLNCRYCKALFYYPDIKAHDEVCPKFP--LTCEGCGKKKILREKFQDH 205
Query: 161 ---------PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSH 211
PCKF+ VGC E+ +++ + H K + HL +L N ++ N H
Sbjct: 206 VKACGKCKGPCKFHVVGCTEMVENEKQ-QDHEIQKVAEHLCMLLNFV----LEARNF--H 258
Query: 212 GRQDTSNQKEI----EAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLK 267
G + S E+ E K E+ + N+ ++E CS + D + +
Sbjct: 259 GDIEVSKSSELLERCETLERKTVTFENIVCVLNREVERVSMTAEA-CSRQHRLDQEKI-E 316
Query: 268 LVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE- 326
+ ++ LE+S+ + + + + E ++ E+E + +G++ WK+ +F K +E
Sbjct: 317 TLSTKVQQLERSIGLKDLAMADME---QKILEMEASTY----DGIFIWKITDFARKRQEA 369
Query: 327 MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVG 383
M + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 370 MAGRSPAIFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQ 429
Query: 384 RIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPV+
Sbjct: 430 KVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVS 462
>gi|332261569|ref|XP_003279842.1| PREDICTED: TNF receptor-associated factor 2 isoform 4 [Nomascus
leucogenys]
Length = 490
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 185/446 (41%), Gaps = 63/446 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKF----CAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
L+ ++ CS C L+ CGH+ CAAC+ I +G + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRSGPQNCAACVHEGIYEEGIS-------ILESSSA 79
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT------- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 80 FPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKER 139
Query: 119 ----DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLNMQG 154
+ P S R+ + + K + F +H+ G
Sbjct: 140 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHIKTCG 199
Query: 155 SSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQ 214
PC+F+ +GC E + + E H HL +L + S + G +
Sbjct: 200 KCR--VPCRFHAIGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLEAKPLSGDQSHVGSE 256
Query: 215 DTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMV 274
+ +E K E+ + N+ ++E CS + D + L ++
Sbjct: 257 LLQRCESLEK---KTATFENIVCVLNREVERVAMTAEA-CSRQHRLDQDKIEAL-SNKVQ 311
Query: 275 LLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRY 333
LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E +
Sbjct: 312 QLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQEAVAGRTPA 364
Query: 334 FYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L
Sbjct: 365 IFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLL 424
Query: 391 NTSSEFSITDEIQSDKNFDSFKRPVN 416
+ ++ + D + D SF+RPVN
Sbjct: 425 DQNNREHVIDAFRPDVTSSSFQRPVN 450
>gi|297685778|ref|XP_002820455.1| PREDICTED: TNF receptor-associated factor 2 isoform 2 [Pongo
abelii]
Length = 490
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 185/445 (41%), Gaps = 63/445 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKF----CAACIDSWIDVKGKNYCPIDEKVLTKDDIF 68
L+ ++ CS C L+ CGH+ CAAC+ I +G + +L F
Sbjct: 28 LEAKYLCSACRNVLRRPFQAQCGHRSGPQNCAACVHEGIYEEGIS-------ILESSSAF 80
Query: 69 IDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT-------- 118
DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 81 PDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKERH 140
Query: 119 ---DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLNMQGS 155
+ P S R+ + + K + F +H+ G
Sbjct: 141 LEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCGK 200
Query: 156 SNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
PC+F+ +GC E + + E H HL +L + S + G +
Sbjct: 201 CR--VPCRFHAIGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLEAKPLSGDQSHAGSEL 257
Query: 216 TSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVL 275
+ +E K E+ + N+ ++E CS + D + L ++
Sbjct: 258 LQRCESLEN---KTATFENIVCVLNREVERVAMTAEA-CSRQHRLDQDKIEAL-SSKVQQ 312
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYF 334
LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +E +
Sbjct: 313 LERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQEAVAGRTPAI 365
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++ L+
Sbjct: 366 FSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLD 425
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVN 416
++ + D + D SF+RPVN
Sbjct: 426 QNNREHVIDAFRPDVTSSSFQRPVN 450
>gi|119608709|gb|EAW88303.1| TNF receptor-associated factor 2, isoform CRA_c [Homo sapiens]
Length = 556
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 183/459 (39%), Gaps = 78/459 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 82 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 141
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 142 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 201
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 202 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 261
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSD 201
G PC+F+ +GC E + + L +H + S LE L
Sbjct: 262 KTCGKCR--VPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHA 319
Query: 202 GSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGD 261
GS+ + T+ + I L + E + + Q D+
Sbjct: 320 GSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK----------- 368
Query: 262 NSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFP 321
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F
Sbjct: 369 ----IEALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFA 417
Query: 322 AKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDIL 377
K +E +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 418 RKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALL 477
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 478 RWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 516
>gi|390458502|ref|XP_003732128.1| PREDICTED: TNF receptor-associated factor 2 isoform 2 [Callithrix
jacchus]
Length = 501
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 183/452 (40%), Gaps = 64/452 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 DKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHI 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
G PC+F+ +GC E + + E H HL +L + S +
Sbjct: 207 KTCGKCR--VPCRFHALGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLETKPLSGDQSQ 263
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVY 270
G + + +E K E+ + N+ + E CS H L L
Sbjct: 264 VGSELLQRCETLEK---KTATFENIVCVLNREVERVALTVEA-CS------RQHRLDLDR 313
Query: 271 ERMVLLEQSMLEQKIKVNNFEL-NLKQ-TEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-M 327
+ + LE+ I + + + +L+Q E+E + +GV+ WK+ +F K +E +
Sbjct: 314 IEALSNKVQQLERSIGLKDLAMADLEQKVLEMEASTY----DGVFIWKISDFARKRQEAV 369
Query: 328 KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGR 384
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF +
Sbjct: 370 AGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQK 429
Query: 385 IRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+ L+ ++ + D + D SF+RPVN
Sbjct: 430 VTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|194390982|dbj|BAG60609.1| unnamed protein product [Homo sapiens]
Length = 490
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 182/455 (40%), Gaps = 81/455 (17%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKF----CAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
L+ ++ CS C L+ CGH+ CAAC+ I +G + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRSGPQNCAACVHEGIYEEGIS-------ILESSSA 79
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT------- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 80 FPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGEKER 139
Query: 119 ----DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLNMQG 154
+ P S R+ + + K + F +H+ G
Sbjct: 140 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHVKTCG 199
Query: 155 SSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSDGSQS 205
PC+F+ +GC E + + L +H + S LE L GS+
Sbjct: 200 KCR--VPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGSEL 257
Query: 206 TNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL 265
+ T+ + I L + E + + Q D+
Sbjct: 258 LQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK--------------- 302
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK 325
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +
Sbjct: 303 IEALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQ 355
Query: 326 EMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPF 381
E +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF
Sbjct: 356 EAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPF 415
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPVN
Sbjct: 416 NQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 450
>gi|344308845|ref|XP_003423087.1| PREDICTED: TNF receptor-associated factor 2 [Loxodonta africana]
Length = 509
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 184/461 (39%), Gaps = 74/461 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ + CGH++C+ C+ S + +N ++ +L
Sbjct: 27 KLEDKYLCSACGNVLRRPVQAQCGHRYCSYCLASILSSGPQNCAACVQEGIYEEGVSILD 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDIT--- 118
F DN RRE+ CP+ C+ ++ EYES H C ++ P+ +
Sbjct: 87 SGSAFPDNAARREVEGLPAVCPHSGCTWTGTVKEYESSHEGHCLFMPTECPACKATVRLG 146
Query: 119 --------DSPTSSF------------------RNTSGIPTNKRN--SKILTVTVFPEHL 150
+ P S +P K + F +H+
Sbjct: 147 EKQRHAELECPERSLSCPHCKAPCCWADLQAHCEVCPKLPLTCEGCGKKKIPREKFQDHV 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNK------YCSDGSQ 204
G PC+F +GC ++ + + E H + HL LL + DG
Sbjct: 207 RTCGKCRA--PCRFQALGCPDMVEREQQQE-HEAQRLQEHLGLLLGRILEAKHLSGDGGW 263
Query: 205 STNTPSHGRQDTSNQKE-IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNS 263
P G + + E + K E+ + N+ ++E CG
Sbjct: 264 EARVP--GLTEPARLLERCDTLERKTATFENIVCVLNREVERVAMTAE------ACGRQH 315
Query: 264 HL----LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYN 319
L ++ + ++ LE+S+ + + + + E +++ E + GV+ WK+ +
Sbjct: 316 RLDQEKIEALSSKVQQLERSIGLKDLAMADLEQKIQEMEAATYD-------GVFIWKITD 368
Query: 320 FPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDD 375
F K +E + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND
Sbjct: 369 FARKRQEAVAGRAPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGPNDA 428
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+L WPF ++ L+ ++ + D + D SF+RP++
Sbjct: 429 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPIS 469
>gi|298204319|gb|ACY38049.2| TNF receptor-associated factor 6 a [Cyprinus carpio]
Length = 351
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 128/310 (41%), Gaps = 46/310 (14%)
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GCRE L +H T H+ + S S PS +S+++
Sbjct: 52 CTFSTFGCREKMPRNEL-AQHMQEFTQMHMRYMAEFLRSQSLSSCPVPSIAAHSSSDER- 109
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE---RMVLLEQ 278
G + C CK + +L + V E R+V +Q
Sbjct: 110 -----------------------GATARAPESCQCKP--ELMNLRETVLELEGRLVRQDQ 144
Query: 279 SMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN 331
+ E QK +V L EE + + GVY W++ NF L+ +
Sbjct: 145 QIRELCIHNETQKNQVTELRRKLSSLEEATRELEAQQYQGVYVWRLENFSLHLRNQEAGQ 204
Query: 332 R-YFYSACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIR 386
+S FY+ GY+ C R+++ +A Y+SLF+H +QGE D L WP G IR
Sbjct: 205 PIVLHSPPFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGEFDSQLSWPLQGTIR 264
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
L+ + +++ + +F+RP N K FG+ F+ + VL RGF+ +D
Sbjct: 265 LAVLDQVEGEHHVEVMETKPDLQAFQRP-TVLRNPKGFGYVTFLHL-QVLQ-QRGFV-KD 320
Query: 447 DTFVIKTQVT 456
D +++ +VT
Sbjct: 321 DVLLVRCEVT 330
>gi|26343105|dbj|BAC35209.1| unnamed protein product [Mus musculus]
Length = 501
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 192/455 (42%), Gaps = 70/455 (15%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-----YCPIDEK---VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N Y + E+ +L
Sbjct: 27 RLEAKYLCSACKNILRRPFQAQCGHRYCSFCLTSILSSGPQNCAACVYEGLYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITDSP 121
F DN RRE+ CP C+ + ++ EYES H C +L P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFLLTECPACKGLVRLS 146
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQ--------------GSSNENFP------ 161
P KR+ H++++ G + P
Sbjct: 147 EKEHHTEQECP--KRSLSCQHCRAPCSHVDLEVHYEVCPKFPLTYDGCGKKKIPRETFQD 204
Query: 162 -----------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
C+F+ VGC E+ +++ L + H + HL LL + + ++ +P
Sbjct: 205 HVRACSKCRVLCRFHTVGCSEMVETENL-QDHELQRLREHLALLLSSF----LEAQASPG 259
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDNSHL---- 265
T NQ E L + + E K+ N + + + + C L
Sbjct: 260 -----TLNQVGPE-LLQRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDK 313
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK 325
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +
Sbjct: 314 IEALSNKVQQLERSIGLKDLAMADLE---QKVSELEVSTY----DGVFIWKISDFTRKRQ 366
Query: 326 E-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPF 381
E + +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF
Sbjct: 367 EAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPF 426
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPV+
Sbjct: 427 NQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVS 461
>gi|83921633|ref|NP_033448.2| TNF receptor-associated factor 2 [Mus musculus]
gi|731003|sp|P39429.1|TRAF2_MOUSE RecName: Full=TNF receptor-associated factor 2; AltName: Full=E3
ubiquitin-protein ligase TRAF2
gi|532621|gb|AAC37662.1| TNF receptor associated factor 2 [Mus musculus]
gi|7329183|gb|AAF59928.1| tumor necrosis factor receptor-associated factor [Mus musculus]
gi|13277840|gb|AAH03801.1| TNF receptor-associated factor 2 [Mus musculus]
gi|74196059|dbj|BAE30582.1| unnamed protein product [Mus musculus]
gi|74212531|dbj|BAE31006.1| unnamed protein product [Mus musculus]
gi|148676310|gb|EDL08257.1| Tnf receptor-associated factor 2 [Mus musculus]
Length = 501
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 192/455 (42%), Gaps = 70/455 (15%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-----YCPIDEK---VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N Y + E+ +L
Sbjct: 27 RLEAKYLCSACKNILRRPFQAQCGHRYCSFCLTSILSSGPQNCAACVYEGLYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITDSP 121
F DN RRE+ CP C+ + ++ EYES H C +L P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFLLTECPACKGLVRLS 146
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQ--------------GSSNENFP------ 161
P KR+ H++++ G + P
Sbjct: 147 EKEHHTEQECP--KRSLSCQHCRAPCSHVDLEVHYEVCPKFPLTCDGCGKKKIPRETFQD 204
Query: 162 -----------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
C+F+ VGC E+ +++ L + H + HL LL + + ++ +P
Sbjct: 205 HVRACSKCRVLCRFHTVGCSEMVETENL-QDHELQRLREHLALLLSSF----LEAQASPG 259
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDNSHL---- 265
T NQ E L + + E K+ N + + + + C L
Sbjct: 260 -----TLNQVGPE-LLQRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDK 313
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK 325
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +
Sbjct: 314 IEALSNKVQQLERSIGLKDLAMADLE---QKVSELEVSTY----DGVFIWKISDFTRKRQ 366
Query: 326 E-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPF 381
E + +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF
Sbjct: 367 EAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPF 426
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPV+
Sbjct: 427 NQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVS 461
>gi|26332439|dbj|BAC29937.1| unnamed protein product [Mus musculus]
Length = 501
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 192/455 (42%), Gaps = 70/455 (15%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-----YCPIDEK---VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N Y + E+ +L
Sbjct: 27 RLEAKYLCSACKNILRRPFQAQCGHRYCSFCLTSILSSGPQNCAACVYEGLYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITDSP 121
F DN RRE+ CP C+ + ++ EYES H C +L P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFLLTECPACKGLVRLS 146
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQ--------------GSSNENFP------ 161
P KR+ H++++ G + P
Sbjct: 147 EKEHHTEQECP--KRSLSCQHCRAPCSHVDLEVHYEVCPKFPLTCDGCGKKKIPRETFQD 204
Query: 162 -----------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
C+F+ VGC E+ +++ L + H + HL LL + + ++ +P
Sbjct: 205 HVRACSKCRVLCRFHTVGCSEMVETENL-QDHELQRLREHLALLLSSF----LEAQASPG 259
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDNSHL---- 265
T NQ E L + + E K+ N + + + + C L
Sbjct: 260 -----TLNQVGPE-LLQRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDK 313
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK 325
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +
Sbjct: 314 IEALSNKVQQLERSIGLKDLAMADLE---QKVSELEVSTY----DGVFIWKISDFTRKRQ 366
Query: 326 E-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPF 381
E + +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF
Sbjct: 367 EAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPF 426
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPV+
Sbjct: 427 NQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVS 461
>gi|312597586|gb|ADQ89802.1| TRAF2 [Homo sapiens]
Length = 501
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 181/459 (39%), Gaps = 78/459 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSD 201
G PC+F+ +GC E + + L +H + S LE L
Sbjct: 207 KTCGKCR--VPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHA 264
Query: 202 GSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGD 261
GS+ + T+ + I L + E + + Q D+
Sbjct: 265 GSELLQGCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK----------- 313
Query: 262 NSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFP 321
++ ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F
Sbjct: 314 ----IEAPSSKVQQLERSIGLKDLAMADLE---QKVSEMEASTY----DGVFIWKISDFA 362
Query: 322 AKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDIL 377
K +E +S FY+ +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 363 RKRQEAVAGRIPAIFSPAFYTRRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALL 422
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 423 RWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|296191206|ref|XP_002743517.1| PREDICTED: TNF receptor-associated factor 2 isoform 1 [Callithrix
jacchus]
Length = 490
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 182/448 (40%), Gaps = 67/448 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKF----CAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
L+ ++ CS C L+ CGH+ CAAC+ I +G + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRSGPQNCAACVHEGIYEEGIS-------ILESSSA 79
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT------- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 80 FPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLGDKER 139
Query: 119 ----DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLNMQG 154
+ P S R+ + + K + F +H+ G
Sbjct: 140 HLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHIKTCG 199
Query: 155 SSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQ 214
PC+F+ +GC E + + E H HL +L + S + G +
Sbjct: 200 KCR--VPCRFHALGCLETVEGEKQQE-HEAQWLREHLAMLLSSVLETKPLSGDQSQVGSE 256
Query: 215 DTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMV 274
+ +E K E+ + N+ + E CS H L L +
Sbjct: 257 LLQRCETLEK---KTATFENIVCVLNREVERVALTVEA-CS------RQHRLDLDRIEAL 306
Query: 275 LLEQSMLEQKIKVNNFEL-NLKQ-TEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEIN 331
+ LE+ I + + + +L+Q E+E + +GV+ WK+ +F K +E +
Sbjct: 307 SNKVQQLERSIGLKDLAMADLEQKVLEMEASTY----DGVFIWKISDFARKRQEAVAGRT 362
Query: 332 RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFT 388
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++
Sbjct: 363 PAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLM 422
Query: 389 ALNTSSEFSITDEIQSDKNFDSFKRPVN 416
L+ ++ + D + D SF+RPVN
Sbjct: 423 LLDQNNREHVIDAFRPDVTSSSFQRPVN 450
>gi|119608711|gb|EAW88305.1| TNF receptor-associated factor 2, isoform CRA_e [Homo sapiens]
Length = 499
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 181/457 (39%), Gaps = 76/457 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSFR-NTSGIPTNKRNSKIL--TVTVFP---------------EHLNM 152
+ P S P + K FP +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKDHVKT 206
Query: 153 QGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSDGS 203
G PC+F+ +GC E + + L +H + S LE L GS
Sbjct: 207 CGKCR--VPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHAGS 264
Query: 204 QSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNS 263
+ + T+ + I L + E + + Q D+
Sbjct: 265 ELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK------------- 311
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K
Sbjct: 312 --IEALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARK 362
Query: 324 LKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDW 379
+E +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L W
Sbjct: 363 RQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRW 422
Query: 380 PFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
PF ++ L+ ++ + D + D SF+RPVN
Sbjct: 423 PFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 459
>gi|355725882|gb|AES08693.1| TNF receptor-associated factor 6 [Mustela putorius furo]
Length = 540
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 14/190 (7%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + V+ + ++ E+ + + CNG+Y WK+ NF LK +E
Sbjct: 335 LTAKMETQSMHVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVI 394
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR L
Sbjct: 395 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLAIL 454
Query: 391 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
+ SE + +EI K +F+RP N K FG+ F+ + + R F+ +D
Sbjct: 455 D-QSEAPVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KD 509
Query: 447 DTFVIKTQVT 456
DT +++ +V+
Sbjct: 510 DTLLVRCEVS 519
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP + C ++ + E H C
Sbjct: 123 AKREILSLMVKCPNEGCLQKMELRHLEDHQAHC 155
>gi|74198042|dbj|BAE35201.1| unnamed protein product [Mus musculus]
gi|74198050|dbj|BAE35205.1| unnamed protein product [Mus musculus]
Length = 501
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 189/455 (41%), Gaps = 70/455 (15%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-----YCPIDEK---VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N Y + E+ +L
Sbjct: 27 RLEAKYLCSACKNILRRPFQAQCGHRYCSFCLTSILSSGPQNCAACVYEGLYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDITDSP 121
F DN RRE+ CP C+ + ++ EYES H C ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFPLTECPACKGLVRLS 146
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQ--------------GSSNENFP------ 161
P KR+ H++++ G + P
Sbjct: 147 EKEHHTEQECP--KRSLSCQHCRAPCSHVDLEVHYEVCPKFPLTCDGCGKKKIPRETFQD 204
Query: 162 -----------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
C+F+ VGC E+ +++ L + H + HL LL + + +
Sbjct: 205 HVSACSKCRVLCRFHTVGCSEMVETENL-QDHELQRLREHLALLLSSF---------LEA 254
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDNSHL---- 265
T NQ E L + + E K+ N + + + + C L
Sbjct: 255 QASPGTLNQVGPE-LLQRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDK 313
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK 325
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +
Sbjct: 314 IEALSNKVQQLERSIGLKDLAMADLE---QKVSELEVSTY----DGVFIWKISDFTRKRQ 366
Query: 326 E-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPF 381
E + +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF
Sbjct: 367 EAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDAMLQWPF 426
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPV+
Sbjct: 427 NQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVS 461
>gi|119588527|gb|EAW68121.1| TNF receptor-associated factor 6, isoform CRA_b [Homo sapiens]
Length = 296
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 14/190 (7%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYF 334
L M Q + V+ + ++ E+ + + CNG+Y WK+ NF LK + +E
Sbjct: 90 LTAKMETQSMYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKCQEEEKPVVI 149
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 150 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 209
Query: 391 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
+ SE + +EI K +F+RP N K FG+ F+ + + R F+ +D
Sbjct: 210 D-QSEAPVRQNHEEIMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KD 264
Query: 447 DTFVIKTQVT 456
DT +++ +V+
Sbjct: 265 DTLLVRCEVS 274
>gi|126302647|ref|XP_001366851.1| PREDICTED: TNF receptor-associated factor 2 isoform 2 [Monodelphis
domestica]
Length = 502
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 192/450 (42%), Gaps = 61/450 (13%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C+ S I +N ++ +L
Sbjct: 28 LEDKYLCSACKNILRRPFQAQCGHRYCSYCLTSIISTGPQNCAACIQEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVE---DITD 119
F DN RRE+ C C+ + +I EYES H C ++ P+ + + +
Sbjct: 88 SSAFPDNAARREVESLPAVCVNDGCTWKGTIKEYESCHEGHCSFMLIECPACKWMIKLGE 147
Query: 120 SPTSSFRNTSGIPTNKRNSKIL-----------TVTVFPEHLNMQGSSNENF-------- 160
S R N R K L FP L +G +
Sbjct: 148 KEHHSERECPKRSLNCRYCKALFYYPDIKAHDEICPKFP--LTCEGCGKKKILREKFQDH 205
Query: 161 ---------PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYC-SDGSQSTNTPS 210
PCKF+ VGC E+ +++ + H + K + HL +L N + P
Sbjct: 206 VKACGKCKGPCKFHVVGCTEMVENEKQ-QDHENQKVAEHLCMLLNFVLEARHFHGDIGPL 264
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVY 270
G++ + +E K E+ + N+ ++E CS + D + + +
Sbjct: 265 LGQELLERCETLE---RKTVTFENIVCVLNREVERVSMTAEA-CSRQHRLDQEKI-ETLS 319
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKE 329
++ LE+S+ + + + + E ++ E+E + +G++ WK+ +F K +E M
Sbjct: 320 SKVQQLERSIGLKDLAMADME---QKILEMEASTY----DGIFIWKITDFARKRQEAMAG 372
Query: 330 INRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++
Sbjct: 373 RSPAIFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVT 432
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
L+ ++ + D + D SF+RPV+
Sbjct: 433 LMLLDQNNREHVIDAFRPDVTSSSFQRPVS 462
>gi|291236708|ref|XP_002738283.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 560
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 209/536 (38%), Gaps = 100/536 (18%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC-PI--------DEKVLTKDDIFI 69
C+ C L+D + CGH+FC CI+ + GK YC PI + VLT D I+
Sbjct: 29 CTFCDHVLRDPFQSYCGHRFCRRCIEGQVS-DGKEYCCPICVVDDPDSSDIVLTTDKIYP 87
Query: 70 DNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC----YLKYSQPSVEDITDSP---- 121
D RE+ + C C EY+ H + C + Q +++I
Sbjct: 88 DRAIFREMKRIPVVCTNTGCDWTGLFIEYQQHEDICEYMVVICARQGCLQNILRCKLKMH 147
Query: 122 ----------TSSFRNTSGI-----------PTNKRNSKILTVTVFPE----HLNMQGS- 155
T + NT + P K K + + E H ++G
Sbjct: 148 SENECHMRIITCKYCNTELVYQELEVHYQSCPKIKVQCKYCNIELLREKLLEHTAIEGGD 207
Query: 156 -SNENFPCKFYQVGC-------REVFKSQALLEKHYDLKTSFHLELLFNKYCS---DGSQ 204
S++ PC F+ +GC +E + ++ H DL S +EL N S Q
Sbjct: 208 CSSKRQPCTFHTIGCSTLVEMGKEADNNVYEIQHHTDLILSKTIEL-GNAMASLEERNVQ 266
Query: 205 STNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGD-----DKSSEGDCSCK-- 257
+ + T++ + IE L K + + D K D D++ + + +
Sbjct: 267 TRQLCTSVEHSTADIQTIETRLHKVEADLQRHIDAEKKNHTDVNIDTDQAEKINNEVRQL 326
Query: 258 -----------------------TCGDNSHLLKLVYERMVLLEQ--SMLEQKIKVNNFEL 292
NS K + E L + +LE++ K + +
Sbjct: 327 NHKLVVIDRKVSTSQEIVAMLNENVDSNSETTKKLQENGEQLNEMIQLLERQCKAQDRSI 386
Query: 293 NLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGY 346
+LK E ++ + NG+ WK+ +F K ++ + YS F++ GY
Sbjct: 387 SLKDVALAEQDLRIHSLEMTSYNGILLWKISDFARKRRDAISGRALSIYSPYFFTDRHGY 446
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQ 403
+ C R+ ++ + ++SLF +++GE D IL WPF ++ L+ S+ + D +
Sbjct: 447 KLCARIYLNGDGMGKGNHVSLFFVVMKGEYDAILKWPFRQKVTLMWLDQSNREHVIDAFR 506
Query: 404 SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV-IKTQVTEM 458
D + SFKRP A G F+ + + PGR ++ +D F+ I T+M
Sbjct: 507 PDPSSTSFKRPKEHM--NIASGCPLFMPLNTIDTPGRQYVKDDVAFIKIIVDTTDM 560
>gi|426225957|ref|XP_004007124.1| PREDICTED: TNF receptor-associated factor 2-like [Ovis aries]
Length = 507
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 180/463 (38%), Gaps = 80/463 (17%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI---------DEKVL 62
L+ ++ CS C L+ CGH++C+ C+ S + G C +L
Sbjct: 27 KLEDKYLCSACKNVLRRPFQAQCGHRYCSFCLSSILS-SGPQSCAACVHEGIYEEGVSIL 85
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT-- 118
F DN RRE+ CP + CS + ++ +YES H C ++ P+ + +
Sbjct: 86 ESSSAFPDNAARREVESLPAVCPSEGCSWKGTLKDYESCHEGHCPFMLTECPACKGLVRL 145
Query: 119 ---------DSPTSSFR----NTSGIPTNKR----------------NSKILTVTVFPEH 149
P S P + + K + F +H
Sbjct: 146 GEKEHHLEHQCPERSLSCRHCRAPCCPADMKAHHQTCPKFPLTCDGCGKKKIAREKFQDH 205
Query: 150 LNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQST--- 206
+ G PC+F+ VGC E+ +S+ E H + HL LL G
Sbjct: 206 VRACGRCR--VPCRFHAVGCPEMVESEQQQE-HEAQRLQEHLALLLGALLEKGGAEVAVP 262
Query: 207 ---NTPSHG---RQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCG 260
+P HG RQ T + A + + +AG EG + G
Sbjct: 263 PGWGSPGHGTHLRQLTPGRLRRWARGLLLEMGTGVEVCHELVRAGRKLVPEGLVEARPHG 322
Query: 261 DNSHLLKLVYERMVLLE---QSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKM 317
+ +L ER + L+ + LEQK+ E+E + +GV+ WK+
Sbjct: 323 PAPQVQQL--ERSIGLKDLAMADLEQKVL------------EMEASTF----DGVFVWKI 364
Query: 318 YNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGEN 373
+F K +E + +S FY+S +GY+ C R ++ + +LSLF L++G +
Sbjct: 365 SDFSRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMRGPH 424
Query: 374 DDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
D +L WPF ++ L+ ++ + D + D SF+RPV
Sbjct: 425 DALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVT 467
>gi|326930147|ref|XP_003211213.1| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor
2-like [Meleagris gallopavo]
Length = 633
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 197/488 (40%), Gaps = 56/488 (11%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ I G C I E +L
Sbjct: 143 LEVKYLCSDCRNILRRPFQAQCGHRYCSYCLKKIIS-SGPQKCASCIQEGIYEEGVSILE 201
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITDSP 121
F DN RRE+ C + C+ + +I EYES H C +L + +
Sbjct: 202 TSSAFPDNAARREVESLPAVCINEGCTWKGTIKEYESCHEGNCPFLLIECQACRGVIPLN 261
Query: 122 TSSFRNTSGIPTNKRNSK----------ILTVTVFPEHL----------NMQGSSNENFP 161
+ P N K I ++P H +++ P
Sbjct: 262 EKERHSERECPERTLNCKYCKSLFYFPDIKVRELYPAHRRPLRDLEFQDHVKNCGKCKVP 321
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C+F VGC E+ +++ L E H + HL +L + S S S H S+Q
Sbjct: 322 CRFEVVGCAEMVENEKLPE-HESKCLAEHLYMLLSFVLSLKSGSGGL-KHLPALPSSQSS 379
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCK--TCGDNSHLLKL-----VYERMV 274
+ ES+L+ + D + + + C N + ++ Y R
Sbjct: 380 SPLLAANSLCPESELFKSLELLGRCDALEKXTVTFENIVCVLNREVERVSLTAEAYSRQH 439
Query: 275 LLEQSMLEQ-KIKVNNFE-------LNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
L+Q +E KV E L + + EE N+ +GV+ WK+ F K +E
Sbjct: 440 RLDQEQIETLSNKVRQLERSIGLKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQE 499
Query: 327 -MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFV 382
+ + +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF
Sbjct: 500 AITGRSPAIFSPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN 559
Query: 383 GRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGF 442
++ L+ ++ I D + D SF+RPV A G F V+ V++ +
Sbjct: 560 QKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPVTEM--NIASGCPLFCPVS-VMEAKNSY 616
Query: 443 LMEDDTFV 450
+ +D F+
Sbjct: 617 VRDDAIFI 624
>gi|291228890|ref|XP_002734409.1| PREDICTED: tumor necrosis factor receptor-associated factor 6-like
[Saccoglossus kowalevskii]
Length = 555
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 29/214 (13%)
Query: 263 SHL-LKLVYERM-------VLLEQSMLEQKIKVNNFELNLKQ-TEEIEDNVVLKLCNGVY 313
SH+ L ++ ERM EQ +LE + K+ + + +K+ T++I + + NG+Y
Sbjct: 347 SHMDLSILAERMRYQEGHIATQEQKILELQAKLESRDKEVKELTQKISRWEAIVMSNGIY 406
Query: 314 FWKMYNFPAKLKEMKEINR-----YFYSACFYSSCFGYRFCTRVNISREDA---QYLSLF 365
+WK N+ E++ I R +S FY+ +GY+ C RVN++ D+ ++SLF
Sbjct: 407 YWKFENY----TELQTITRSGETSVVHSPGFYTGYYGYKLCLRVNLNGIDSAHSSHVSLF 462
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQ----SDKNFDSFKRPVNFFLNK 421
+H +QGE DD LDWPF G+I T L+ + + + + I + +F RP N
Sbjct: 463 VHFMQGEWDDFLDWPFSGKITLTILDQNEDTRVRNHISETLIAKPALAAFHRPKT-NRNH 521
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
K FG+ F + + G ++++ +IK V
Sbjct: 522 KGFGYMEFAPLRTI---HAGHYIKENCLLIKAVV 552
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++ T CGH+FC +CI + G CPID L+ +F DN+
Sbjct: 18 LESKYECPICLMALREPTQTQCGHRFCRSCICQSMRETGSK-CPIDNTPLSFSSLFPDNF 76
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP C+ + E H C
Sbjct: 77 AKREILGLRVKCPNPGCTFVFELRNLEEHNLKC 109
>gi|449502197|ref|XP_002198512.2| PREDICTED: TNF receptor-associated factor 6 [Taeniopygia guttata]
Length = 545
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 21/201 (10%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M E K + N E + + E + CNG+Y WK+ NF +
Sbjct: 334 HQIRELIAKMETQNTHMAELKRTIRNLEGKITEMEA-------QQCNGIYIWKIENF-SG 385
Query: 324 LKEMKEINR--YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDIL 377
L+ +E R +S FY+ GY+ C R++I +AQ ++SLF+H +QGE D L
Sbjct: 386 LQRAQEEERPVVLHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQGEYDSHL 445
Query: 378 DWPFVGRIRFTALNTS--SEFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVAD 434
WPF G IR + L+ S E +E+ K +F+RP N K FG+ F+ +
Sbjct: 446 PWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQRPT-IHRNPKGFGYVTFMHLET 504
Query: 435 VLDPGRGFLMEDDTFVIKTQV 455
+ R F+ +DDT +++ +V
Sbjct: 505 LKQ--RTFI-KDDTLLVRCEV 522
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC CI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP K CS ++ + E H C
Sbjct: 123 AKREILSLMVKCPNKGCSMKMELRHLEDHQLQC 155
>gi|296481964|tpg|DAA24079.1| TPA: TNF receptor-associated factor 5-like [Bos taurus]
Length = 536
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 184/461 (39%), Gaps = 67/461 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI---------DEKVL 62
L+ ++ CS C L+ CGH++C+ C+ S + G C +L
Sbjct: 47 KLEDKYLCSACKNVLRRPFQAQCGHRYCSFCLSSILS-SGPQSCAACVHEGIYEEGVSIL 105
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT-- 118
F DN RRE+ CP + CS + ++ +YES H C ++ P+ + +
Sbjct: 106 ESSSAFPDNAARREVESLPAVCPSEGCSWKGTLKDYESCHEGQCPFMLTECPACKGLVRL 165
Query: 119 ---------DSPTSSFR----NTSGIPTNKR----------------NSKILTVTVFPEH 149
P S P + + K + F +H
Sbjct: 166 GEKEHHLEHQCPERSLSCRHCRAPCSPADMKAHHQICPKFPLTCDGCGKKKIAREKFQDH 225
Query: 150 LNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNT- 208
+ G PC+F+ VGC E+ +S+ E H + HL LL G ++
Sbjct: 226 VRACGRCR--VPCRFHAVGCPEMVESEQQPE-HEAQRLQEHLALLLGVLLEAGRPPGDSR 282
Query: 209 ----PSHGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDNS 263
P G + + L + + E K N + + + + CG
Sbjct: 283 LLLRPGEGALEAGTPSRVAELLQRCEALERKTATFENIVCVLNREVERVAVTAEACGRQH 342
Query: 264 HL----LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYN 319
L ++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +
Sbjct: 343 RLDQDRIEALSNKVQQLERSIGLKDLAMADLE---QKVLEMEASTF----DGVFIWKISD 395
Query: 320 FPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDD 375
F K +E + +S FY+S +GY+ C R ++ + +LSLF L++G +D
Sbjct: 396 FSRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMRGPHDA 455
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+L WPF ++ L+ ++ + D + D SF+RPV
Sbjct: 456 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVG 496
>gi|301789051|ref|XP_002929939.1| PREDICTED: TNF receptor-associated factor 2-like [Ailuropoda
melanoleuca]
Length = 501
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 181/450 (40%), Gaps = 68/450 (15%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTKDDI 67
++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 31 KYLCSACKNVLRRPFQAQCGHRYCSYCLTSILSSGPQNCAACVHEGIYEEGVSILESGSA 90
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT------- 118
F DN RRE+ CP C+ + ++ EYES H C ++ P+ + +
Sbjct: 91 FPDNAARREVESLPAICPSDGCTWKGTLKEYESCHEGHCPFTLTECPACKGLVRLGEKAR 150
Query: 119 ----DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLNMQG 154
+ P S R+ + + K ++ F +H+ G
Sbjct: 151 HSEQECPERSLSCRHCRAPCCWADLKAHHEVCPKFPLTCDGCGKKKISREKFQDHVRACG 210
Query: 155 SSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQ 214
PC+F+ VGC E+ +S EK + + E L + +
Sbjct: 211 KCR--VPCRFHIVGCPEMVES----EKQQQHEAQWLREHLGLLLGRLLETKQLAGAELSK 264
Query: 215 DTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL----LKLVY 270
Q+ EA K E+ + N+ ++E CG L ++ +
Sbjct: 265 AAELQQRCEALERKTATFENIVCVLNREVERVAMTAEA------CGRQHRLDQDRIEALS 318
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKE 329
++ LE+S+ + + + E ++ E+E +GV+ WK+ +F K +E +
Sbjct: 319 NKVQQLERSIGLKDLAMAELE---QKVHEMEATTF----DGVFIWKISDFARKRQEAVAG 371
Query: 330 INRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIR 386
+S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WPF ++
Sbjct: 372 RTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGPNDALLRWPFNQKVT 431
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
L+ ++ + D + D SF+RPV+
Sbjct: 432 LMLLDQNNREHVIDAFRPDVTSSSFQRPVS 461
>gi|358414689|ref|XP_874100.4| PREDICTED: TNF receptor-associated factor 2 isoform 2 [Bos taurus]
gi|359070772|ref|XP_002691752.2| PREDICTED: TNF receptor-associated factor 2 [Bos taurus]
Length = 516
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 184/461 (39%), Gaps = 67/461 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI---------DEKVL 62
L+ ++ CS C L+ CGH++C+ C+ S + G C +L
Sbjct: 27 KLEDKYLCSACKNVLRRPFQAQCGHRYCSFCLSSILS-SGPQSCAACVHEGIYEEGVSIL 85
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT-- 118
F DN RRE+ CP + CS + ++ +YES H C ++ P+ + +
Sbjct: 86 ESSSAFPDNAARREVESLPAVCPSEGCSWKGTLKDYESCHEGQCPFMLTECPACKGLVRL 145
Query: 119 ---------DSPTSSFR----NTSGIPTNKR----------------NSKILTVTVFPEH 149
P S P + + K + F +H
Sbjct: 146 GEKEHHLEHQCPERSLSCRHCRAPCSPADMKAHHQICPKFPLTCDGCGKKKIAREKFQDH 205
Query: 150 LNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNT- 208
+ G PC+F+ VGC E+ +S+ E H + HL LL G ++
Sbjct: 206 VRACGRCR--VPCRFHAVGCPEMVESEQQPE-HEAQRLQEHLALLLGVLLEAGRPPGDSR 262
Query: 209 ----PSHGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDNS 263
P G + + L + + E K N + + + + CG
Sbjct: 263 LLLRPGEGALEAGTPSRVAELLQRCEALERKTATFENIVCVLNREVERVAVTAEACGRQH 322
Query: 264 HL----LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYN 319
L ++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +
Sbjct: 323 RLDQDRIEALSNKVQQLERSIGLKDLAMADLE---QKVLEMEASTF----DGVFIWKISD 375
Query: 320 FPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDD 375
F K +E + +S FY+S +GY+ C R ++ + +LSLF L++G +D
Sbjct: 376 FSRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMRGPHDA 435
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+L WPF ++ L+ ++ + D + D SF+RPV
Sbjct: 436 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVG 476
>gi|118099110|ref|XP_415560.2| PREDICTED: TNF receptor-associated factor 2 [Gallus gallus]
Length = 507
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/485 (23%), Positives = 194/485 (40%), Gaps = 61/485 (12%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ I G C I E +L
Sbjct: 28 LEVKYLCSDCRNILRRPFQAQCGHRYCSYCLKKIIS-SGPQKCASCIQEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITDSP 121
F DN RRE+ C + C+ + +I EYES H C +L + +
Sbjct: 87 TSSAFPDNAARREVESLPAVCINEGCTWKGTIKEYESCHEGNCPFLLIECQACRGVIPLN 146
Query: 122 TSSFRNTSGIPTNKRNSKIL-TVTVFPE-----------HLNMQGSSNENFP-------- 161
+ P N K ++ FP+ L G + P
Sbjct: 147 EKERHSERECPERTLNCKYCKSLFYFPDIKAHDEVCPKFPLTCDGCGKKKIPREKFQDHV 206
Query: 162 ---------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTN---TP 209
C+F VGC E+ +++ L E H + HL +L + S S S + P
Sbjct: 207 KNCGKCKVPCRFKVVGCAEMVENEKLPE-HESKCLAEHLYMLLSFVLSLKSGSGDLKHLP 265
Query: 210 SHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLV 269
S + +A K E+ + N+ ++E S +L
Sbjct: 266 SELFKSLELLGRCDALEKKTVTFENIVCVLNREVERVSLTAEA---------YSRQHRLD 316
Query: 270 YERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
E++ L + + + + +L + + EE N+ +GV+ WK+ F K +E +
Sbjct: 317 QEQIETLSNKVRQLERSIGLKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAIT 376
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
+ +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF ++
Sbjct: 377 GRSPAIFSPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKV 436
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ ++ I D + D SF+RPV A G F V+ V++ ++ +
Sbjct: 437 TLMLLDQNNREHIIDAFRPDVTSSSFQRPVTEM--NIASGCPLFCPVS-VMEAKNSYVRD 493
Query: 446 DDTFV 450
D F+
Sbjct: 494 DAIFI 498
>gi|344280794|ref|XP_003412167.1| PREDICTED: TNF receptor-associated factor 6-like [Loxodonta
africana]
Length = 515
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 14/189 (7%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYF 334
L M Q + V + ++ E+ + + CNG+Y WK+ NF LK + +E
Sbjct: 309 LTAKMETQSMYVGELKRTIRTLEDRIAEIEAQECNGIYIWKIGNFGMHLKCQEEEKPVVI 368
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR L
Sbjct: 369 HSPGFYTGKPGYKMCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLAIL 428
Query: 391 NTSSEFSIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
+ SE + +EI K +F+RP N K FG+ F+ + + R F+ +D
Sbjct: 429 D-QSETPVRQNHEEIMDTKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFV-KD 483
Query: 447 DTFVIKTQV 455
DT +++ +V
Sbjct: 484 DTLLVRCEV 492
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP C ++ + E H C
Sbjct: 123 AKREILSLKVKCPNAGCLHKMELRHLEDHQAHC 155
>gi|432875433|ref|XP_004072839.1| PREDICTED: TNF receptor-associated factor 2-like [Oryzias latipes]
Length = 502
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 194/449 (43%), Gaps = 60/449 (13%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ + C+ C + L+ + CGH+FC C + + G C I E +L
Sbjct: 29 LEDKHLCNSCEKILRRPLQAQCGHRFCCFCFNRTVS-SGPQKCSACIKEDLFEEPTSILK 87
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYE-SHVNTC-YLKYSQPSVEDITDSP 121
+ F DN RRE+ CP + C+ ++ EYE SH +C + PS +++ +
Sbjct: 88 QGGAFHDNAARREVEALAAVCPNEGCTWTGTVKEYEASHEGSCDFTIIMCPSCKELMRAN 147
Query: 122 TSSFRNTSGIPTNKRNSKILTVT-----------VFPEHLNM-QGSSNENFP-------- 161
N P N K + P++ M +G + + P
Sbjct: 148 EQERHNERECPERTLNCKYCKEPFLLKNIKAHDEICPKYPMMCEGCAKKKIPREKYVDHI 207
Query: 162 ---------CKFYQVGCREVFKSQALLEKHYDLKTSF-HLELLFNKYCSDGSQSTNTPSH 211
C+F+ VGC + + + + ++ + S+ HL LL + Q + +
Sbjct: 208 KFCSKFKAPCRFHVVGCDTSVEKEKIHD--HERQCSYEHLNLLLHFIMGIKLQLQSEKTK 265
Query: 212 GRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE 271
+ + +E+E +K E+ + N+ E + SC T + +L +
Sbjct: 266 VAELSRRCQELE---LKVSTFENIVCILNR---------ELERSCATMEAYNRQHRLDQD 313
Query: 272 RMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEI 330
++ +L + + + V+ +L++ + E ++ +G++ WK+ +F K ++ M
Sbjct: 314 KIEILSNKVRQLERTVSLRDLSIVEMEGKMKDMSAATYDGIFIWKISDFTKKRQDAMAGR 373
Query: 331 NRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
+S FY+S +GY+ C R+ ++ + +LSLF +++G +D +L WPF ++
Sbjct: 374 APAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTL 433
Query: 388 TALNTSSEFSITDEIQSDKNFDSFKRPVN 416
L+ ++ I D + D + SF+RPV+
Sbjct: 434 MLLDQNNREHIIDAFRPDISSSSFQRPVS 462
>gi|432885886|ref|XP_004074805.1| PREDICTED: TNF receptor-associated factor 2-like [Oryzias latipes]
Length = 516
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 198/507 (39%), Gaps = 67/507 (13%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK---- 60
P++ + ++ +++C CL+ L+ + CGH+FC C + G C K
Sbjct: 16 PLSVLSVPMEDKYKCQQCLQVLRKPVQAQCGHRFCVHCFRQ-LTSSGPKPCQACRKEEIY 74
Query: 61 -----VLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PS 113
+L + F DN REI C + C SI EYE+ H C + Q +
Sbjct: 75 EEPMSILNSSEAFPDNAAGREIASLPARCLNQGCDWTGSIKEYEAKHEGRCEFEQIQCEA 134
Query: 114 VEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFP------------ 161
+ + N N K VT + + + FP
Sbjct: 135 CQALVLRKDKDRHNDRECEERTLNCKYCKVTFNFKDIKAHDEICQKFPLQCKDCGKKKIP 194
Query: 162 -----------------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQ 204
C F +VGC+ V ++ + E H T HL LL S
Sbjct: 195 REKFNDHAKSCAKSKSACPFSEVGCKSVVENGKISE-HEHSSTMEHLRLLLPMVLSMTRT 253
Query: 205 STNT-PSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSS-----------EG 252
+T PS Q+ S + Y + + P+ + D K S E
Sbjct: 254 RLDTSPSGEWQEDSG---LGLYRAPDDGCGAAASVPSVDL--DKKVSALENIVCVLNREV 308
Query: 253 DCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGV 312
+ S T SH +L E++ L + + + + +L L + E++ + +G+
Sbjct: 309 ERSSLTLEAFSHQHRLDQEKIENLSNKIRQLERSLTVKDLQLSEAEQMVRELQYCTYDGI 368
Query: 313 YFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
+ WK+ +F + +E + +S FYSS +GY+ C R+ ++ + +LSLF +
Sbjct: 369 FVWKITDFSHRRQEAVSGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVV 428
Query: 369 VQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNN 428
++ + D +L WPF ++ L+ ++ I D + D SF+RPV+ A G
Sbjct: 429 MRSKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDITSTSFQRPVSEM--NIASGCPL 486
Query: 429 FIRVADVLDPGRGFLMEDDTFVIKTQV 455
F +A + G+ + DDT IK V
Sbjct: 487 FCPLAKL--AGKSPYLRDDTIFIKAIV 511
>gi|395506468|ref|XP_003757554.1| PREDICTED: TNF receptor-associated factor 2 isoform 2 [Sarcophilus
harrisii]
Length = 511
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 193/462 (41%), Gaps = 76/462 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDV--------KGKNYCP--IDE--- 59
L+ ++ CS C L+ CGH++C+ C+ S I G C I E
Sbjct: 28 LEDKYLCSACKNILRRPFQAQCGHRYCSYCLTSIIRAYFFSIFISTGPQNCAACIQEGIY 87
Query: 60 ----KVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPS 113
+L F DN RRE+ C C+ + +I EYES H C ++ P+
Sbjct: 88 EEGISILESSSAFPDNAARREVESLPAICVNDGCTWKGTIKEYESCHEGHCPFMLIECPA 147
Query: 114 VE---DITDSPTSSFRNTSGIPTNKRNSKIL-----------TVTVFPEHLNMQGSSNEN 159
+ + + S R N R K L FP L +G +
Sbjct: 148 CKWMIKLGEKEHHSERECPKRSLNCRYCKALFYYPDIKAHDEVCPKFP--LTCEGCGKKK 205
Query: 160 F-----------------PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDG 202
PCKF+ VGC E+ +++ + H K + HL +L N
Sbjct: 206 ILREKFQDHVKACGKCKGPCKFHVVGCTEMVENEKQ-QDHEIQKVAEHLCMLLNFV---- 260
Query: 203 SQSTNTPSHGRQDTSNQKEI----EAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKT 258
++ N HG + S E+ E K E+ + N+ ++E CS +
Sbjct: 261 LEARNF--HGDIEVSKSSELLERCETLERKTVTFENIVCVLNREVERVSMTAEA-CSRQH 317
Query: 259 CGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMY 318
D + + + ++ LE+S+ + + + + E ++ E+E + +G++ WK+
Sbjct: 318 RLDQEKI-ETLSTKVQQLERSIGLKDLAMADME---QKILEMEASTY----DGIFIWKIT 369
Query: 319 NFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGEND 374
+F K +E M + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND
Sbjct: 370 DFARKRQEAMAGRSPAIFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPND 429
Query: 375 DILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+L WPF ++ L+ ++ + D + D SF+RPV+
Sbjct: 430 ALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVS 471
>gi|2736258|gb|AAC53545.1| tumor necrosis factor receptor associated factor 2A [Mus musculus]
Length = 508
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 188/462 (40%), Gaps = 77/462 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK------GKNYCPI-------- 57
L+ ++ CS C L+ CGH++C+ C+ S + G C
Sbjct: 27 RLEAKYLCSACKNILRRPFQAQCGHRYCSFCLTSILRCASILSSSGPQNCAACVYEGLYE 86
Query: 58 -DEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSV 114
+L F DN RRE+ CP C+ + ++ EYES H C +L P+
Sbjct: 87 EGISILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFLLTECPAC 146
Query: 115 EDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQ--------------GSSNENF 160
+ + P KR+ H++++ G +
Sbjct: 147 KGLVRLSEKEHHTEQECP--KRSLSCQHCRAPCSHVDLEVHYEVCPKFPLTCDGCGKKKI 204
Query: 161 P-----------------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGS 203
P C+F+ VGC E+ +++ L + H + HL LL + +
Sbjct: 205 PRETFQDHVRACSKCRVLCRFHTVGCSEMVETENL-QDHELQRLREHLALLLSSF----L 259
Query: 204 QSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDN 262
++ +P T NQ E L + + E K+ N + + + + C
Sbjct: 260 EAQASPG-----TLNQVGPE-LLQRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQ 313
Query: 263 SHL----LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMY 318
L ++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+
Sbjct: 314 HRLDQDKIEALSNKVQQLERSIGLKDLAMADLE---QKVSELEVSTY----DGVFIWKIS 366
Query: 319 NFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGEND 374
+F K +E + +S FY+S +GY+ C RV ++ + +LSLF +++G ND
Sbjct: 367 DFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPND 426
Query: 375 DILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+L WPF ++ L+ ++ + D + D SF+RPV+
Sbjct: 427 ALLQWPFNQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVS 468
>gi|291236712|ref|XP_002738285.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 537
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 203/514 (39%), Gaps = 81/514 (15%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI--------DEKVLTKDDI 67
+F C+ C L++ + CGH++C CI I + G C I + ++T D I
Sbjct: 26 KFICTFCTLVLREPMQAYCGHRYCKPCITGEISLNGIYRCLICLADDPECTDSIITPDKI 85
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFR 126
F D RE+ + + C C + EY+ H C Y + P + + R
Sbjct: 86 FPDRAISREMRKLIVKCINDGCEWKGFFIEYQRHEEICTYAVITCPRDGCLQEIQQRYLR 145
Query: 127 N--TSGIPTNKRNSKILTVTV------FPEHLNMQGS--SNENFPCKFYQVGCREVFKSQ 176
P N V + EH +++ + + PC F VGC + + +
Sbjct: 146 EHCDDDCPMRTVNCMYCDVQIIYQNKQLKEHTDVENGDCTKKMRPCIFAAVGCNILVEME 205
Query: 177 ALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS---HGRQDTSN----QKEIEAYLMKN 229
H + + H+ LL K T H RQ S +KE+ + +
Sbjct: 206 GE-ASHNESEIHNHMHLLRLKIEQLNEAKTTMAEDKIHIRQLNSATEGLRKELSSLETRV 264
Query: 230 KEHESKLWD-----PNKNQAGDDKSSEGDCSCKTCG------------------------ 260
++ +K+ ++N + DDK SE + K G
Sbjct: 265 RDTRAKIEQISAHMEHQNDSYDDKYSE---TTKQIGKQIDNMETKITSLEKNIKTQQQIV 321
Query: 261 --------DNSHLLKLVYERMVLLEQSM--LEQKIKVNNFELNLKQTEEIEDNVVLKLC- 309
N++ +K + LE + LE K K + + LK E ++ ++
Sbjct: 322 TLLNTEVQSNANTIKSIEPSRKFLEDQLNALEYKCKGQDRIIALKDVTLAEHDLKIQALE 381
Query: 310 ----NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQY 361
+G+ WK+ +F K ++ + YS F++ GY+ C RV ++ + +
Sbjct: 382 MASYDGILVWKITDFARKRRDSISGRALSIYSPYFFTGRHGYKLCARVYLNGDGMGKGNH 441
Query: 362 LSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNK 421
+SLF +++GE D IL WPF ++ L+ S+ + D + D +SF+RP
Sbjct: 442 VSLFFVVMKGEYDAILKWPFRQKVTLMWLDQSNREHVIDAFRPDPVSNSFQRPTGDM--N 499
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ + ++LD R ++DDT +K V
Sbjct: 500 IASGCPLFMPL-NMLDSARHIYVKDDTAYVKIIV 532
>gi|156404524|ref|XP_001640457.1| predicted protein [Nematostella vectensis]
gi|156227591|gb|EDO48394.1| predicted protein [Nematostella vectensis]
Length = 488
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 202/499 (40%), Gaps = 66/499 (13%)
Query: 5 PVANNKLNLD-----PRFE--CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI 57
P A +LD P E C+IC + + +LTSCGH +C CI+ W + K CP+
Sbjct: 9 PYAGEGFDLDQFIIPPNDELICAICHMVVNEPVLTSCGHSYCKYCIEKWCNGKEVVTCPV 68
Query: 58 DEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ------ 111
D + L IF D T R +L + C C + + + + H+ C K +
Sbjct: 69 DNEQLKPSQIFPDKKTDRIVLSLEVKCTNNPCRWKGELRQKQKHLKICSHKAVKCILEGC 128
Query: 112 ----PSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQV 167
P + + T +R P N K TV +H + PC+F ++
Sbjct: 129 NVKVPRILMEKHTNTCGWRLLHCKPCNLSYPKKDEETV--QHKD--DCPLAFLPCRFSEI 184
Query: 168 GCREVFKS-QALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQ------- 219
GC FK ++ ++H + HL + + Q ++ H D Q
Sbjct: 185 GC--TFKGRESARDEHCESAVQTHLHIACETIRDNKEQISDL--HKELDKVRQELQTKSC 240
Query: 220 ---KEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLL 276
KE+ A K H+ + D NK Q + S E + T +N L + + + +
Sbjct: 241 DHMKEVNAIREK---HDEAIRD-NKGQI-EALSKEHGIASNTIHENKEQLDTLKKELGIA 295
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR---- 332
+++ + + ++ K T+ + V ++CN +K A +E+K N
Sbjct: 296 SETIRKNRDQIAKLSTACK-TQYTDGTFVWRICNYKDKYKKAVAFATNQEVKGGNSDSDD 354
Query: 333 -------YFYSACFYSSCFGYRFCTRV---NISREDAQYLSLFIHLVQGENDDILDWPFV 382
S FY+S +GY+ + +LSL I +++GE D IL+WPF
Sbjct: 355 DISMAGDIMVSLPFYTSRYGYKMRLKAYPNGYGDGKGTHLSLSIRIMKGEYDAILEWPFR 414
Query: 383 GRIRFTALNTSSEF-SITDEIQSDKNF----DSFKRPVNFFLNKKAFGFNNFIRVADVLD 437
+I + +N S ++ S T EI D F+RP+ G++ FI ++
Sbjct: 415 RKITLSLINQSEQWRSETVEIYPDDATPDKKHKFERPIEN--ENVGCGYSCFISHMEL-- 470
Query: 438 PGRGFLMEDDTFVIKTQVT 456
G ++DD I+ +T
Sbjct: 471 -NSGDYIKDDVIFIEAVIT 488
>gi|281348125|gb|EFB23709.1| hypothetical protein PANDA_020259 [Ailuropoda melanoleuca]
Length = 523
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 186/465 (40%), Gaps = 76/465 (16%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTKDDI 67
++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 31 KYLCSACKNVLRRPFQAQCGHRYCSYCLTSILSSGPQNCAACVHEGIYEEGVSILESGSA 90
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT------- 118
F DN RRE+ CP C+ + ++ EYES H C ++ P+ + +
Sbjct: 91 FPDNAARREVESLPAICPSDGCTWKGTLKEYESCHEGHCPFTLTECPACKGLVRLGEKAR 150
Query: 119 ----DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLNMQG 154
+ P S R+ + + K ++ F +H+ G
Sbjct: 151 HSEQECPERSLSCRHCRAPCCWADLKAHHEVCPKFPLTCDGCGKKKISREKFQDHVRACG 210
Query: 155 SSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLELLFNKYCSDGSQSTN 207
PC+F+ VGC E+ +S+ L +H L LE + G +
Sbjct: 211 KCR--VPCRFHIVGCPEMVESEKQQQHEAQWLREHLGLLLGRLLET--KQLAGAGGRFLG 266
Query: 208 TPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAG--------DDKSSEGDCSCKTC 259
G + S EA L K E + + + A + + + + C
Sbjct: 267 QSEVGGWEASTLHP-EAELSKAAELQQRCEALERKTATFENIVCVLNREVERVAMTAEAC 325
Query: 260 GDNSHL----LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFW 315
G L ++ + ++ LE+S+ + + + E ++ E+E +GV+ W
Sbjct: 326 GRQHRLDQDRIEALSNKVQQLERSIGLKDLAMAELE---QKVHEMEATTF----DGVFIW 378
Query: 316 KMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQG 371
K+ +F K +E + +S FY+S +GY+ C R+ ++ + +LSLF +++G
Sbjct: 379 KISDFARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRG 438
Query: 372 ENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
ND +L WPF ++ L+ ++ + D + D SF+RPV+
Sbjct: 439 PNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVS 483
>gi|327259747|ref|XP_003214697.1| PREDICTED: TNF receptor-associated factor 6-like [Anolis
carolinensis]
Length = 548
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V + + +K EE + + CNG++ WK+ +F LK ++E +S
Sbjct: 346 METQNSQVGDLKGTIKNLEEKITELEAQQCNGIFIWKIEHFSVYLKALEEERPVVIHSPG 405
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS- 393
FY+ GY+ C R++I + Q Y+SLF+H++QGE D+ L WPF G IR + L+ S
Sbjct: 406 FYTGKPGYKLCMRLHIQLPNVQRCANYISLFVHIMQGEYDNYLPWPFQGTIRLSVLDQSE 465
Query: 394 -SEFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
S +E+ K +F+RP N K FG+ F+++ + R ++ ED V
Sbjct: 466 GSPRQNHEEVMDTKPELLAFQRP-KTRRNPKGFGYVTFMQLQTLRQ--RTYIKEDTVLV 521
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CPID ++L + +F DN+
Sbjct: 67 LESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAG-HKCPIDNEILLETQLFPDNF 125
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP K C ++ + E H C
Sbjct: 126 AKREILSLTVKCPNKGCDQKMELRHLEDHQQHC 158
>gi|444705796|gb|ELW47185.1| TNF receptor-associated factor 3 [Tupaia chinensis]
Length = 521
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 201/485 (41%), Gaps = 60/485 (12%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + G C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSGPK-CTACQESIVKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVN--------TCYLKYSQPSV--EDITDS 120
+REIL + C + C+ QL++ H+ +C + V +D+ D
Sbjct: 106 CKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCQFEELSCVRADCKERVLRKDLRDH 165
Query: 121 PTSSFRNTSGIPTN-KRNSKILTV----------------------TVFPEHLNMQGSSN 157
+ + ++ K ++T+ T+ L+ S
Sbjct: 166 VEKACKYREATCSHCKSQVPMVTLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAHLSEC 225
Query: 158 ENFP--CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQD 215
N P C F + GC VF+ K ++ ++ L ++ + + S +
Sbjct: 226 VNAPSTCSFKRYGC--VFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKRVIDSQAEKL 283
Query: 216 TSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVL 275
KEI + +E +S + ++ ++ +E + K+ G + L+ ++
Sbjct: 284 KELDKEIRPFRQNWEEADSM---KSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSR 340
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYF 334
+Q + I++ + +L + E N GV WK+ ++ + +E +
Sbjct: 341 HDQMLSVHDIRLADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSL 393
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 394 YSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMD 453
Query: 392 T-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
SS + D + D N SFK+P A G F+ VL+ G ++DDT
Sbjct: 454 QGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIF 508
Query: 451 IKTQV 455
IK V
Sbjct: 509 IKVIV 513
>gi|301627203|ref|XP_002942767.1| PREDICTED: TNF receptor-associated factor 2-like [Xenopus
(Silurana) tropicalis]
Length = 427
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 194/458 (42%), Gaps = 81/458 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++ CS C L+ + CGH++C+ C++ I G C ++ I+
Sbjct: 31 LEVKYLCSDCKNLLRRPLQAQCGHRYCSHCLNKIIST-GPQKC----SACIQEGIY---- 81
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
RE E L C Y C P+ ++H C K+ T IP
Sbjct: 82 -ERECPERKLNCRY--CKLSFYFPDIKAHDEICP-KFPM----------TCEGCGRKKIP 127
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLE 192
K FP+H+ + G PC++ VGC E+ ++ LE H + + HL
Sbjct: 128 REK----------FPDHVKICGRCK--VPCRYAAVGCTEMVENDKCLE-HENKSLAEHLA 174
Query: 193 LLFNKYCSDGSQSTNTPSHG--RQDTSNQK-----EIEAYLMKNKEHESKLWDPNKNQ-- 243
+ + ++ + + DT ++K I + L + E S + Q
Sbjct: 175 KVPAPPANAPPNNSAKVAEMLLKFDTLDKKNTTFENIVSVLNREVERSSHAAEELARQLR 234
Query: 244 AGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDN 303
A +K ++ + ++ LE+++ ++++ V E ++++E
Sbjct: 235 AAQEK-----------------VEALTTKVRQLERTLGQKELIVAELETRMQESE----- 272
Query: 304 VVLKLCNGVYFWKMYNFPAKLKEMKEINR---YFYSACFYSSCFGYRFCTRVNISREDA- 359
L +GV+ WK+ F K ++ IN +S FY++ +GY+ C R+ ++ +
Sbjct: 273 --LSTYDGVFIWKISEFGKKRQDA--INGRCPAMFSPPFYTNKYGYKMCLRIYLNGDGTG 328
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNF 417
+LSLF +++G ND +L WPF ++ L+ ++ + D + D + SF+RP++
Sbjct: 329 RNTHLSLFFVVMKGNNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVSSSSFQRPISE 388
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F +V+ + G+ + DDT +K V
Sbjct: 389 M--NIASGCPLFCQVSKL--EGKNSYVRDDTIFVKVIV 422
>gi|215415903|dbj|BAG85182.1| Traf3 [Eptatretus burgeri]
Length = 561
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 115/524 (21%), Positives = 198/524 (37%), Gaps = 103/524 (19%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
++ C +C L++A T CGH+ C +C D + + CP + L + ++ D R
Sbjct: 40 KYCCGVCSLPLREAHQTGCGHRLCRSCADGLL-TETNPQCPECSEPLDQKQVYRDTCCNR 98
Query: 76 EILENNL-----------------------TCPYK-------QCSSQLSIPEYESHVNTC 105
EIL ++ TCPY+ CS L+ H TC
Sbjct: 99 EILNLHVFCPNEASGCCETMVLHKLLVHLDTCPYELVACHNDACSMHLARLYMPQHHGTC 158
Query: 106 -----YLKYSQPSVEDITDS-----------PTSSFRNTSGIPTNKRNSKILTVTVFPEH 149
+ K+ V + P + + GIP N+ ++
Sbjct: 159 PFRLEFCKFCSAPVPCVQLEEHKQTCPKYLLPCPNNCDEHGIPRNELEKHLVQCA----- 213
Query: 150 LNMQGSSNENFPCKFYQVGCREVFKSQA---------LLEKHYDLKTSF----------- 189
L Q S F C F G + V + +A +L KH +L+ +
Sbjct: 214 LTEQPCSFHRFGCDFKACG-KGVSEHEAGSVPQHLLLVLRKHTELQETLGQVQGELEQKA 272
Query: 190 ----HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAG 245
++L + D S ++ E K + KLW+ + G
Sbjct: 273 SVFEQMQLRLERAERDAEHWGKLVSKNEASLTSTMEKVTSQTKRMQVLEKLWE---SSNG 329
Query: 246 DDKSSEGDCSCKTCGDN----SHLLKLVYERMVLLEQ-----SMLEQKIKVNNFELNLKQ 296
S + C DN +L++V R+ LE +E+ ++ + L +
Sbjct: 330 LSTMSLESSRSRECHDNLKGVRQMLEVVKTRLSTLESLQSTVGTMEKTLQTHESLLPVHT 389
Query: 297 TEEIEDNVVLKL-----CNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCT 350
+ ++ +L C+G WK+ ++ + ++ I YS FY++ FGY+ C
Sbjct: 390 QRLADTDLRFQLLETVSCSGRLVWKLTDYAQRKQDATTGITPSLYSQPFYTTTFGYKMCA 449
Query: 351 RVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDK 406
RV ++ + +LSLF +++GE D IL WPF R+ L+ ++D + D
Sbjct: 450 RVYLNGDGVGRGTHLSLFFVVMRGEYDTILSWPFRQRVTLMLLDQGPGRKHLSDTFKPDP 509
Query: 407 NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
SFKRP + A G F+ VL+ R +L +D F+
Sbjct: 510 TSSSFKRPTSEM--NVASGCPMFVS-HGVLE-SRTYLKDDSIFL 549
>gi|47223568|emb|CAF99177.1| unnamed protein product [Tetraodon nigroviridis]
Length = 519
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 203/513 (39%), Gaps = 76/513 (14%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGK--NYCPIDE--- 59
P++ + ++ +++C CL+ L+ + CGH+FC C K C +E
Sbjct: 16 PLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFRELTSSGPKPCEACRQEEIYE 75
Query: 60 ---KVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYL-------- 107
+L +++F DN REI C + CS SI +YE+ H C
Sbjct: 76 EPTSILNSNEVFPDNAAGREIASLPARCLNQDCSWTGSIKQYEAQHEGRCEFEQIKCDAC 135
Query: 108 ----------KYSQPSVEDITDSP-----TSSFRNT-------SGIPTNKRN--SKILTV 143
++++ E T + T F++ S P ++ K +
Sbjct: 136 QAFVLRAEKDRHNERECEARTLNCKYCKFTFHFKDIKAHDEICSKFPLQCKDCGKKKIPR 195
Query: 144 TVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGS 203
F EH+ S C F +VGC+ V ++ L E H + T H+ LL S
Sbjct: 196 EKFNEHIKSCAKSKS--ACPFSEVGCKSVVENGKLSE-HENSSTMEHMRLLLPIVLS--- 249
Query: 204 QSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCK---TCG 260
T + S + + ++ L + E + A + E + C
Sbjct: 250 ---LTQARAEVSDSGEWQEDSVLGLYRAPEEGVHVGAGAAASVHVNLEKKVTALERIVCV 306
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC----------- 309
N + + Q L+Q+ K+ N L Q E + L+L
Sbjct: 307 LNREVERSTAMLEAFAHQHALDQE-KIENLSTKLGQLERVIAMRDLQLSETEQMVRELQS 365
Query: 310 ---NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYL 362
+G++ WK+ F + +E + +S FYSS +GY+ C R+ ++ + +L
Sbjct: 366 CTYDGIFVWKISEFSRRRQEAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHL 425
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKK 422
SLF +++G+ D +L WPF ++ L+ ++ I D + D SF+RP++
Sbjct: 426 SLFFVVMKGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPISEM--NI 483
Query: 423 AFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F +A + G+ ++DDT IK V
Sbjct: 484 ASGCPLFCPLAKL--AGKSPYLKDDTIFIKAIV 514
>gi|328724996|ref|XP_003248312.1| PREDICTED: TNF receptor-associated factor 6-like [Acyrthosiphon
pisum]
Length = 104
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DPRFECSICL LKD +LT CGH+FC+ CI +W+ K + CPID LT + +F DNY
Sbjct: 5 IDPRFECSICLNCLKDPMLTRCGHRFCSECISTWLKRKSQ-ICPIDLLPLTIEGLFPDNY 63
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
T+REI E + C C + + E + H ++C
Sbjct: 64 TKREIDEQKVACLNIGCDVIIPLLEADQHYSSC 96
>gi|348574752|ref|XP_003473154.1| PREDICTED: TNF receptor-associated factor 2-like [Cavia porcellus]
Length = 501
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 193/451 (42%), Gaps = 64/451 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLTK 64
L+ ++ CS C L+ CGH++C+ C++S + +N ++ +L
Sbjct: 28 LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLNSILSSGPQNCAACVQEGIYEEGVSILET 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDIT---- 118
F DN RRE+ CP + C+ + ++ EYE+ H C +L P+ +
Sbjct: 88 SSAFPDNAARREVESLPAICPNEGCTWKGTLKEYENCHEGLCPFLLTECPACKGRVRLGE 147
Query: 119 -------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHLN 151
+ P S R+ + + K + F +H+
Sbjct: 148 KERHAEQECPERSLACRHCRAPCCRSDLEAHHEVCPKFPLTCDGCGKKKVPREKFQDHVR 207
Query: 152 MQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSH 211
G PC+F+ VGC E+ +++ L + H + HL LL + T
Sbjct: 208 TCG--KYRVPCRFHAVGCPELVEAEEL-QGHEGQQLREHLALLLSS-----LLDAQTLPG 259
Query: 212 GRQDTSNQ--KEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLV 269
G+ +++ ++ +A K E+ + N+ ++E CS + D + L
Sbjct: 260 GQSQAASELLQQCQALERKTATFENIVCVLNREVERVAVTAEA-CSRQHRLDQDKIEAL- 317
Query: 270 YERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
++ LE+S+ + + + + E ++ E+E +GV+ WK+ +F K +E +
Sbjct: 318 SNKVQQLERSIGLKDLAMADLE---QKVLELEAATY----DGVFIWKISDFSRKRQEAVA 370
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
+S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF ++
Sbjct: 371 GRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKV 430
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
L+ ++ + D + D SF+RPV+
Sbjct: 431 TLMLLDQNNREHVIDAFRPDVTSSSFQRPVS 461
>gi|345304843|ref|XP_003428269.1| PREDICTED: TNF receptor-associated factor 3 [Ornithorhynchus
anatinus]
Length = 483
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 197/471 (41%), Gaps = 69/471 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C++ + K C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMNMLLSSSPK--CSACQENVIKDKVFKDNC 103
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSG 130
+REIL + C + C+ QL++ H+ S E+++
Sbjct: 104 CKREILALQIYCRNENRGCTEQLTLGHLLVHLK------SDCQFEELS------------ 145
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCR------EVFKSQALLEKHYD 184
P K+L P+H+ CK+ + C+ + Q L ++
Sbjct: 146 CPRADCKEKVLRKD-LPDHIEKS--------CKYREATCKYCTSQVPMITLQVSLLQNES 196
Query: 185 LKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKLWD 238
++ + ++ L N+ CS + R + S Q+ I++ K KE E + +
Sbjct: 197 VEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFR 256
Query: 239 PNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNN 289
N +A KSS E + K G + ++ ++ +Q + I++ +
Sbjct: 257 QNWEEADSMKSSVESLQNRVTELESVDKNAGQAARNTGMLETQLSRHDQMLSVHDIRLAD 316
Query: 290 FELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRF 348
+L + E NGV WK+ ++ + +E + YS FY+ FGY+
Sbjct: 317 MDLRFQVLETAS-------YNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKM 369
Query: 349 CTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQS 404
C RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D +
Sbjct: 370 CARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKP 429
Query: 405 DKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 430 DPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 475
>gi|125817024|ref|XP_683631.2| PREDICTED: TNF receptor-associated factor 2 isoform 1 [Danio rerio]
Length = 532
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 192/505 (38%), Gaps = 74/505 (14%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI---------DEKV 61
++++P+++C C + L+ CGH+FC C + G C + V
Sbjct: 37 VSMEPKYQCQQCKDILRKPFQAQCGHRFCVFCFKQ-LTSSGPIPCEACRAEGIFEEETSV 95
Query: 62 LTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQPSVEDITDS 120
L F DN RREI CP + CS ++ ++E+ H C + + +
Sbjct: 96 LNIAVAFPDNAARREIDSLPAKCPNEGCSWSGTLKDFENQHEGRCAFERVKCEACQVLIL 155
Query: 121 PTSSFR-NTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFP------------------ 161
+ R N N K VT + + + FP
Sbjct: 156 LSEKDRHNERECEARTLNCKYCKVTFNFKEIKAHDEICQKFPMQCKDCGKKKIPREKFQE 215
Query: 162 -----------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
C+F ++GCR V + ++H HL L+ S +
Sbjct: 216 HTKSCAKSKSACQFREIGCRAVVDN-CKQQEHEQTSIMEHLRLMLALL-----SSMRLRA 269
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCK--TCGDNSHLLKL 268
G + Q+++ L + E N + G + + + C N + +
Sbjct: 270 EGAGEW--QEDVGLGLYRGPEDAPPAGAHNVGRGGGPGVQKKVTTLENIVCVLNKEVERS 327
Query: 269 VYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC--------------NGVYF 314
+ Q L+Q+ K+ N ++Q E L+L +GV+
Sbjct: 328 ALTMEAISRQHRLDQE-KIENLSNKVRQLERTLTTRDLQLAESEQSLRELQFCTYDGVFI 386
Query: 315 WKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQ 370
WK+ F + ++ + +S FYSS +GY+ C R+ ++ + +LSLF +++
Sbjct: 387 WKIAEFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMK 446
Query: 371 GENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFI 430
G+ D +L WPF ++ L+ ++ I D + D + SF+RP++ A G F
Sbjct: 447 GKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVSSTSFQRPISEM--NIASGCPLFC 504
Query: 431 RVADVLDPGRGFLMEDDTFVIKTQV 455
+A + G+ + DDT IK V
Sbjct: 505 PLAKL--AGKSSYLRDDTIFIKAIV 527
>gi|22219211|pdb|1LB4|A Chain A, Traf6 Apo Structure
Length = 159
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Query: 309 CNGVYFWKMYNFPAKLK-EMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YLS 363
CNG+Y WK+ NF LK + +E +S FY+ GY+ C R+++ AQ Y+S
Sbjct: 2 CNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYIS 61
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFFL 419
LF+H +QGE D L WPF G IR T L+ SE + +EI K +F+RP
Sbjct: 62 LFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEEIMDAKPELLAFQRP-TIPR 119
Query: 420 NKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 120 NPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 153
>gi|22219212|pdb|1LB5|A Chain A, Traf6-Rank Complex
gi|22219214|pdb|1LB6|A Chain A, Traf6-Cd40 Complex
Length = 160
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 14/157 (8%)
Query: 309 CNGVYFWKMYNFPAKLK-EMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YLS 363
CNG+Y WK+ NF LK + +E +S FY+ GY+ C R+++ AQ Y+S
Sbjct: 3 CNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYIS 62
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFFL 419
LF+H +QGE D L WPF G IR T L+ SE + +EI K +F+RP
Sbjct: 63 LFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEEIMDAKPELLAFQRP-TIPR 120
Query: 420 NKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 121 NPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 154
>gi|387019313|gb|AFJ51774.1| TNF receptor-associated factor 6-like [Crotalus adamanteus]
Length = 546
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 12/184 (6%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + C+G++ WK+ NF A LK +E +S
Sbjct: 345 METQQNQMGDLKRTIRTLEEKIADIESQQCSGIFLWKIENFSAYLKAQEEERPVVIHSPG 404
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS- 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 405 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQSE 464
Query: 394 -SEFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 451
S +E+ K +F+RP+ N K FG+ F+++ + R ++ +DD ++
Sbjct: 465 GSPRHNHEEVMDTKPELLAFQRPMA-HRNPKGFGYVTFMQLQALKQ--RTYI-KDDILLV 520
Query: 452 KTQV 455
+ +V
Sbjct: 521 RCEV 524
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CPID ++L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAG-HKCPIDNEILLENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP K CS +L + E H C
Sbjct: 125 AKREILSLTVKCPNKGCSQKLELRHLEDHQIHC 157
>gi|221044466|dbj|BAH13910.1| unnamed protein product [Homo sapiens]
Length = 485
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 194/473 (41%), Gaps = 70/473 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLKYSQPSVEDITDSPTSSFRNT 128
+REIL + C + C+ QL + H+ N C+ + P V D FR
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFE-ELPCVR--PDCKEKVFRKD 161
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCRE------VFKSQALLEKH 182
+H+ CK+ + C + Q L ++
Sbjct: 162 -----------------LRDHVEK--------ACKYREATCSHCKSQVPMIALQVSLLQN 196
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKL 236
++ + ++ L N+ CS + R + S Q+ I++ K KE E +
Sbjct: 197 ESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRP 256
Query: 237 WDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKV 287
+ N +A KSS E + K+ G + L+ ++ +Q + I++
Sbjct: 257 FRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRL 316
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGY 346
+ +L + E NGV WK+ ++ + +E + YS FY+ FGY
Sbjct: 317 ADMDLRFQVLETAS-------YNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGY 369
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEI 402
+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D
Sbjct: 370 KMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAF 429
Query: 403 QSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 430 KPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 477
>gi|426378104|ref|XP_004055784.1| PREDICTED: TNF receptor-associated factor 3 isoform 4 [Gorilla
gorilla gorilla]
Length = 485
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 194/473 (41%), Gaps = 70/473 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLKYSQPSVEDITDSPTSSFRNT 128
+REIL + C + C+ QL++ H+ N C+ + P V D R
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE-ELPCVR--PDCKEKVLRKD 161
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCRE------VFKSQALLEKH 182
+H+ CK+ + C + Q L ++
Sbjct: 162 -----------------LRDHVEK--------ACKYREATCSHCKSQVPMIALQVSLLQN 196
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKL 236
++ + ++ L N+ CS + R + S Q+ I++ K KE E +
Sbjct: 197 ESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRP 256
Query: 237 WDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKV 287
+ N +A KSS E + K+ G + L+ ++ +Q + I++
Sbjct: 257 FRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRL 316
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGY 346
+ +L + E N GV WK+ ++ + +E + YS FY+ FGY
Sbjct: 317 ADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGY 369
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEI 402
+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D
Sbjct: 370 KMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAF 429
Query: 403 QSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 430 KPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 477
>gi|432851185|ref|XP_004066897.1| PREDICTED: TNF receptor-associated factor 6-like [Oryzias latipes]
Length = 569
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 5 PVANNKLNLDP----RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK 60
P+ + DP ++EC ICL L++AI T CGH+FC +CI+ I G+ CP+D +
Sbjct: 60 PLQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQR-CPVDNE 118
Query: 61 VLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+L++D +F DN+ +REIL + CP C ++ + E H+ C
Sbjct: 119 MLSEDQLFPDNFAKREILSLTVRCPNSDCGEKMELRHLEKHLAQC 163
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISREDAQ----YLSL 364
+G++ W++ F L+ + I +S FY+ GY+ C R+++ A ++SL
Sbjct: 395 HGIFIWRLKAFSTHLRSQEAGIPVVEHSPGFYTGRPGYKLCLRLHLQTPTAPRCSNFISL 454
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK-NFDSFKRPVNFFLNKKA 423
F+H +QG D L WPF G IR L+ E E+ K + +F++P+N N K
Sbjct: 455 FVHTMQGVFDSQLTWPFQGTIRLAILDQGPEGQHHMEVMETKPDLQAFQKPIN-QRNPKG 513
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
FG+ F+ + L R ++ +DDT +I+ +VT
Sbjct: 514 FGYVTFMHRS--LLSQRAYV-KDDTLLIRCEVT 543
>gi|156378007|ref|XP_001630936.1| predicted protein [Nematostella vectensis]
gi|156217967|gb|EDO38873.1| predicted protein [Nematostella vectensis]
Length = 482
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 175/459 (38%), Gaps = 79/459 (17%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD 65
+A + + C+ C +KDA+ T+CGH++C+ CI + +G C + +TK
Sbjct: 11 IATTDTAIAAKHLCAKCRLIVKDAVQTACGHRYCSPCISPLLS-RGPIQCDVCGSTITKP 69
Query: 66 DIFIDNYTRREILENNLTC---PYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPT 122
+ F D + REILE ++ C P+ C + + ++H C +P
Sbjct: 70 ETFRDKFADREILELHVHCVNQPHG-CPWEGELRHRQNHHTKCEF------------NPI 116
Query: 123 SSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENF-------------------PCK 163
S G K L+V PEHL + E C
Sbjct: 117 SCVHPECG--------KKLSVAKLPEHLQNECQYREETCSYCEQPVVVARMKEHHEKTCP 168
Query: 164 FYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIE 223
Y V C + K +E H T F E K G NT S K++E
Sbjct: 169 SYPVNCPKCSKELIRVEVH---STPFTREPRLEK----GRGCENTLEVLEDHESRIKKLE 221
Query: 224 ---AYLMKNKEHESKLWDPNKNQA-GDDKSSEGDCSCKTCGDN----------SHLLKLV 269
+ N ++ + N+A GD + K L + V
Sbjct: 222 QRGGGIGVNGLQSMRISENIDNEAIGDVLRRVANVEAKGADHEVLVVEAHSAVDELRREV 281
Query: 270 YERMVLLEQS-----MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF-----WKMYN 319
V L++S LE+++++++ L+ + L G F WK+ N
Sbjct: 282 GRLNVKLQESDDIIRRLERQLELHDQGTGLRNLAIADLEERLNTLQGTTFDSVLLWKITN 341
Query: 320 FPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDD 375
K E FYS CF++ GY+ C R+ ++ + ++SLF +++GE D
Sbjct: 342 VANKRSEATSGRVTSFYSPCFFTGPHGYKMCARIYLNGDGMGRNHHVSLFFVIMRGEFDA 401
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRP 414
+L WPF ++ L+ + + D + D + SF+RP
Sbjct: 402 LLRWPFRQKVTLMLLDQDNVEHVIDAFRPDPSSSSFQRP 440
>gi|93117587|gb|ABE99696.1| TNF receptor associated factor 2 [Ctenopharyngodon idella]
Length = 536
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 195/507 (38%), Gaps = 74/507 (14%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC------PIDEKVLTK 64
++++P+++C C E L+ CGH+FC C + G C I E+ ++
Sbjct: 37 VSMEPKYQCQQCKEILRKPFQAQCGHRFCVFCFKQ-LTSSGPIPCEACRAEGIFEEAMSM 95
Query: 65 DDI---FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITD 119
+I F DN RREI CP CS ++ +YE H C + + + + +
Sbjct: 96 LNITVAFPDNAARREIDSLPAKCPNDGCSWSGTLKDYEGQHEGRCDFERVKCEACQAVIL 155
Query: 120 SPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFP------------------ 161
N N K VT + + + FP
Sbjct: 156 LSEKDRHNERECEARTLNCKYCKVTFNFKEIKAHDEICQKFPMQCKDCGKKKIPREKFQE 215
Query: 162 -----------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
C+F ++GCR V + ++H HL L+ + S +
Sbjct: 216 HTKSCAKSKSACQFSEIGCRAVVDN-GKQQEHEQTSVMEHLRLMLSVL-----SSVRLRA 269
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDP--NKNQAGDDKSSEGDCSCK--TCGDNSHLL 266
G + + Y + N + G + + + C N +
Sbjct: 270 EGAGEWQEDSGLGLYRGPEDAPPAGPNAAAHNAGRGGGPGVQQKVTALENIVCVLNREVE 329
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTE-----------EIEDNVV-LKLC--NGV 312
+ L Q L+Q+ K+ N ++Q E E E ++ L+ C +GV
Sbjct: 330 RSALTLEALSRQHRLDQE-KIENLSNKVRQLERTLTMRDLQLAESEQSLRELQFCTYDGV 388
Query: 313 YFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
+ WK+ +F + ++ + +S FYSS +GY+ C R+ ++ + +L LF +
Sbjct: 389 FIWKIADFSRRRQDAVGGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLPLFFVV 448
Query: 369 VQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNN 428
++G+ D +L WPF ++ L+ ++ I D + D + SF+RP++ A G
Sbjct: 449 MRGKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVSSTSFQRPISEM--NIASGCPL 506
Query: 429 FIRVADVLDPGRGFLMEDDTFVIKTQV 455
F +A + G+ + DDT IK V
Sbjct: 507 FCPLAKL--AGKSSYLRDDTIFIKAIV 531
>gi|348526678|ref|XP_003450846.1| PREDICTED: TNF receptor-associated factor 6-like [Oreochromis
niloticus]
Length = 571
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 1 MEHQPVANNKLNLDP----RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP 56
++ P+ + DP ++EC ICL L++AI T CGH+FC +CI+ I G+ CP
Sbjct: 55 LQAAPLQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQR-CP 113
Query: 57 IDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+D ++L++D +F DN+ +REIL + CP C+ ++ + E H+ C
Sbjct: 114 VDNEMLSEDQLFPDNFAKREILSLTVRCPNSGCAEKMELRHLEDHLVHC 162
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYF-YSAC 338
+ E + +V+ E +K+ E + CNG++ W++ F L+ + +S
Sbjct: 374 LAELRRRVSMLEDTVKELEA-------QHCNGIFIWRLKGFSVHLRNQEAGQPVVEHSPG 426
Query: 339 FYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSS 394
FY+ GY+ C R+++ A Y+SLF+H +QG D L WPF G IR L+
Sbjct: 427 FYTGRPGYKLCLRLHLQTPSAPRCSSYISLFVHTMQGAFDGQLTWPFQGTIRLAILDQGP 486
Query: 395 EFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKT 453
E + +++ + +F++P N K FG+ F+ ++ + R ++ +DDT +I+
Sbjct: 487 EGQHHMEAMETKPDLQAFQKP-TIQRNPKGFGYVTFMHLSQLSQ--RAYV-KDDTLLIRC 542
Query: 454 QVT 456
+VT
Sbjct: 543 EVT 545
>gi|327278715|ref|XP_003224106.1| PREDICTED: TNF receptor-associated factor 3-like isoform 2 [Anolis
carolinensis]
Length = 542
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 205/514 (39%), Gaps = 96/514 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH++C C+++ + C ++ + K+ IF DN
Sbjct: 46 VEDKYKCEKCRLILCNPRQTECGHRYCETCMNALLSCTIPK-CTACQETIVKEKIFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC-YLKYSQPSVE--------DITDS 120
RRE+L + C K C QL++ + +H+ N C + + P V+ D+ D
Sbjct: 105 CRRELLALQIFCRNENKGCREQLTLGQLLTHLRNDCLFEELPCPRVDCKEKILRKDLPDH 164
Query: 121 P--TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQAL 178
T +R T T K + + + +H E+ C V C AL
Sbjct: 165 AEKTCKYRET----TCKYCKSQVPIIMIQKH--------EDADCPCVMVTCPHKCSVSAL 212
Query: 179 LEK-----------------HYDLKTSFH--------------------LELLFNKYCSD 201
L K H DL + ++ L N+ CS
Sbjct: 213 LRKEGTNQQVKAHETSSAVQHVDLLKEWSNCLENKVAMLQNESLEKNKSIQTLHNQICSF 272
Query: 202 GSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKLWDPNKNQAGDDKSS----- 250
+ R + S Q+ I++ K KE E + + N +A KSS
Sbjct: 273 EIEIERQKEMLRSNESKIHHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQ 332
Query: 251 ----EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVL 306
E + KT G + L+ ++ +Q + I++ + +L + E N
Sbjct: 333 NRVTELESVDKTAGQGARNAGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN--- 389
Query: 307 KLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYL 362
G+ WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +L
Sbjct: 390 ----GILIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHL 445
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
SLF +++GE D +L WPF ++ ++ S + D + D N SFK+P
Sbjct: 446 SLFFVIMRGEYDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEM--N 503
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ G ++DDT IK V
Sbjct: 504 IASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 534
>gi|281350540|gb|EFB26124.1| hypothetical protein PANDA_000106 [Ailuropoda melanoleuca]
Length = 457
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 189/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 2 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 60
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P +SH+NTC IP
Sbjct: 61 VQVLGLAIRCIHSEEGCRWSGPLRHLQSHLNTCSFNV---------------------IP 99
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R S L+ P HL C+F GC E F+S + +
Sbjct: 100 CPNRCSTKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAFESHEGVCPQESVYCEN 156
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 157 KCGARMMRRLLAQHATSECPKRTQPCTYCAKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 216
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 217 VAREDLPGHLKESCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 274
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 275 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 331
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 332 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 391
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 392 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 445
>gi|313661483|ref|NP_001186356.1| TNF receptor-associated factor 3 isoform 3 [Homo sapiens]
Length = 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 193/473 (40%), Gaps = 70/473 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLKYSQPSVEDITDSPTSSFRNT 128
+REIL + C + C+ QL + H+ N C+ + P V D R
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFE-ELPCVR--PDCKEKVLRKD 161
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCRE------VFKSQALLEKH 182
+H+ CK+ + C + Q L ++
Sbjct: 162 -----------------LRDHVEK--------ACKYREATCSHCKSQVPMIALQVSLLQN 196
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKL 236
++ + ++ L N+ CS + R + S Q+ I++ K KE E +
Sbjct: 197 ESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRP 256
Query: 237 WDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKV 287
+ N +A KSS E + K+ G + L+ ++ +Q + I++
Sbjct: 257 FRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRL 316
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGY 346
+ +L + E N GV WK+ ++ + +E + YS FY+ FGY
Sbjct: 317 ADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGY 369
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEI 402
+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D
Sbjct: 370 KMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAF 429
Query: 403 QSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 430 KPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 477
>gi|301753050|ref|XP_002912362.1| PREDICTED: TNF receptor-associated factor 4-like [Ailuropoda
melanoleuca]
Length = 469
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 189/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 14 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 72
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P +SH+NTC IP
Sbjct: 73 VQVLGLAIRCIHSEEGCRWSGPLRHLQSHLNTCSFNV---------------------IP 111
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R S L+ P HL C+F GC E F+S + +
Sbjct: 112 CPNRCSTKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAFESHEGVCPQESVYCEN 168
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 169 KCGARMMRRLLAQHATSECPKRTQPCTYCAKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 228
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 229 VAREDLPGHLKESCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 286
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 287 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 343
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 344 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 403
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 404 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 457
>gi|410980323|ref|XP_003996527.1| PREDICTED: TNF receptor-associated factor 4 [Felis catus]
Length = 470
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 188/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P +SH+NTC IP
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQSHLNTCSFNV---------------------IP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E F+S + +
Sbjct: 113 CPNRCPTKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAFESHEGVCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ S+ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHASSECPKRTQPCTYCAKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKESCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|348554667|ref|XP_003463147.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Cavia
porcellus]
Length = 484
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 194/473 (41%), Gaps = 72/473 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCRLVLCSPKQTECGHRFCETCMAALLSSPSPK-CTACQESIIKDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLKYSQPSVEDITDSPTSSFRNTS 129
+REIL + C + C+ QL++ H+ N C +
Sbjct: 105 CKREILALQIYCRNEARGCAEQLTLGHLLVHLKNDCQFEE-------------------- 144
Query: 130 GIPTNKRNSKILTVTV-FPEHLNMQGSSNENFPCKFYQVGCRE------VFKSQALLEKH 182
+P + + K + +H+ CK+ + C + Q L ++
Sbjct: 145 -LPCMRADCKERVLRRDLRDHVEK--------ACKYREATCSHCKSQVPMITLQVSLLQN 195
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKL 236
++ + ++ L N+ CS + R + S Q+ I++ K KE E +
Sbjct: 196 ESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRP 255
Query: 237 WDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKV 287
+ N +A KSS E + K+ G + L+ ++ +Q + I++
Sbjct: 256 FRQNWEEADSVKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRL 315
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGY 346
+ +L + E N GV WK+ ++ + +E + YS FY+ FGY
Sbjct: 316 ADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGY 368
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEI 402
+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D
Sbjct: 369 KMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAF 428
Query: 403 QSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 429 KPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 476
>gi|410962999|ref|XP_003988054.1| PREDICTED: TNF receptor-associated factor 3 isoform 4 [Felis catus]
Length = 485
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 196/473 (41%), Gaps = 70/473 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIIKDKVFKDN 104
Query: 72 YTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTCYLKYSQPSVEDITDSPTSSFRNT 128
+REIL + C + C+ QL++ H+ N C F
Sbjct: 105 CCKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC------------------QFEEL 146
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCRE------VFKSQALLEKH 182
S + + + K+L +H+ CK+ + C + Q L ++
Sbjct: 147 SCVRADCKE-KVLRRD-LRDHVEK--------ACKYREATCSHCKSQVPMITLQVSLLQN 196
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKL 236
++ + ++ L N+ CS + R + S Q+ I++ K KE E +
Sbjct: 197 ESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRP 256
Query: 237 WDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKV 287
+ N +A KSS E + K+ G + L+ ++ +Q + I++
Sbjct: 257 FRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRL 316
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGY 346
+ +L + E N GV WK+ ++ + +E + YS FY+ FGY
Sbjct: 317 ADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGY 369
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEI 402
+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D
Sbjct: 370 KMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAF 429
Query: 403 QSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 430 KPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 477
>gi|170716426|gb|ACB31915.1| TNF receptor-associated factor 6 [Gekko gecko]
Length = 200
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 61 METQNTHMGNLKCTIRNLEEKITEIEAQQCNGIFIWKIENFSIYLKAQEEERPVVIHSPG 120
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+FC R++I +AQ Y+SLF+H +QGE+D L WPF G IR + L+ S
Sbjct: 121 FYTGKPGYKFCLRLHIQLPNAQRCANYISLFVHTMQGEHDSHLPWPFQGTIRLSILDQS 179
>gi|345803830|ref|XP_003435113.1| PREDICTED: TNF receptor-associated factor 3 [Canis lupus
familiaris]
Length = 485
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 196/473 (41%), Gaps = 70/473 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAAVLSSSSPK-CTACQESIIKDKVFKDN 104
Query: 72 YTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTCYLKYSQPSVEDITDSPTSSFRNT 128
+REIL + C + C+ QL++ H+ N C F
Sbjct: 105 CCKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC------------------QFEEL 146
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCRE------VFKSQALLEKH 182
S + + + K+L +H+ CK+ + C + Q L ++
Sbjct: 147 SCVRADCKE-KVLRRD-LRDHVEK--------ACKYREATCPHCKSQVPMITLQVSLLQN 196
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKL 236
++ + ++ L N+ CS + R + S Q+ I++ K KE E +
Sbjct: 197 ESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRP 256
Query: 237 WDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKV 287
+ N +A KSS E + K+ G + L+ ++ +Q + I++
Sbjct: 257 FRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRL 316
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGY 346
+ +L + E N GV WK+ ++ + +E + YS FY+ FGY
Sbjct: 317 ADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGY 369
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEI 402
+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D
Sbjct: 370 KMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAF 429
Query: 403 QSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 430 KPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 477
>gi|417401488|gb|JAA47629.1| Putative tnf receptor-associated factor 4 [Desmodus rotundus]
Length = 470
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 186/473 (39%), Gaps = 67/473 (14%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC +P
Sbjct: 74 VQVLSLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E F+S + +
Sbjct: 113 CPNRCPTKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAFESHEGVCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLGQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMV--LLEQSMLEQKIKVNNFE 291
+ D C K G KL R V ++ + VN
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHVEESVKPHLAMMCALVNRQR 289
Query: 292 LNLKQ-TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFC 349
L++ E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY+
Sbjct: 290 QELQELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQ 347
Query: 350 TRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDE 401
+ + +LSL+I ++ G D++L+WPF R+ F+ L+ S +T+
Sbjct: 348 VSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTET 407
Query: 402 IQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 408 FHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|410929579|ref|XP_003978177.1| PREDICTED: TNF receptor-associated factor 2-like [Takifugu
rubripes]
Length = 501
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 192/483 (39%), Gaps = 54/483 (11%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ + C+ C L+ CGH+FC+ C + + G C I E +L
Sbjct: 28 LEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNRTVS-NGPQKCSACIKEDIFEDPTSILK 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYE-SHVNTC-YLKYSQPSVEDITDSP 121
+ F DN RRE+ C + C+ + +I EYE +H C ++ S PS ++
Sbjct: 87 QGCAFPDNAVRREVEHLPAACINENCTWKGTIKEYELNHEGKCEFMIISCPSCKEHIRFN 146
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEK 181
N P N K P H + +E C Y + C K + EK
Sbjct: 147 EQERHNERECPERTLNCKYCKE---PFHFKNIKAHDEI--CPKYPMICEGCAKKKIPREK 201
Query: 182 HYD---LKTSFHLELLFNKYCSDGS-QSTNTPSHGRQDTSNQKEIEAYL---MKNKEHES 234
+ D + F F+ D S + H R + + MK + H
Sbjct: 202 YVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYAYEHLNLLLHYIMGMKLQLHSE 261
Query: 235 KLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVL-LEQSMLEQKIKVNNFELN 293
K K + +E + T + +L ER +E S + K+ + E
Sbjct: 262 K----TKVAELGRRCTELEVKANTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEAL 317
Query: 294 LKQTEEIEDNVVLK-----------------LCNGVYFWKMYNFPAKLKE-MKEINRYFY 335
+ ++E V LK +GV+ W++ +F K ++ + +
Sbjct: 318 SNKVRQLERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMF 377
Query: 336 SACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT 392
S FY+S +GY+ C R+ ++ + +LSLF +++G++D +L WPF ++ L+
Sbjct: 378 SPAFYTSKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGQSDALLKWPFNQKVTLMLLDQ 437
Query: 393 SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
S+ I D + D SF+RPV+ A G F ++ LD G+ + DDT IK
Sbjct: 438 SNREHIIDAFRPDVTSSSFQRPVSEM--NIASGCPLFCPLSK-LD-GKNSYIRDDTIFIK 493
Query: 453 TQV 455
V
Sbjct: 494 AIV 496
>gi|975273|gb|AAA87706.1| tumor necrosis factor type 2 receptor associated protein 3 [Homo
sapiens]
Length = 501
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 174/458 (37%), Gaps = 76/458 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSD 201
G PC+F+ +GC E + + L +H + S LE L
Sbjct: 207 KTCGKCR--VPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHA 264
Query: 202 GSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGD 261
GS+ + T+ + I L + E + + Q D+
Sbjct: 265 GSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK----------- 313
Query: 262 NSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFP 321
++ + ++ LE+S+ + + + + E ++ + + C K+
Sbjct: 314 ----IEALSSKVQQLERSIGLKDLAMADLEQKVRPFQAQCGHRYCSFCLASILRKLQEAV 369
Query: 322 AKLKEMKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILD 378
A I F A FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 370 AG-----RIPAIFSPA-FYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLR 423
Query: 379 WPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 424 WPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>gi|392936129|gb|AFM93129.1| TNF receptor-associated factor 6, partial [Platysaurus pungweensis]
Length = 191
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M QK + + + ++ EE V + CNG++ WK+ NF LK +E+
Sbjct: 59 LTAKMETQKTHMGDLKRIVQNLEEKLAEVEAQQCNGIFIWKIENFSIYLKAQEEVKPVVI 118
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H++QG+ D L WPF G IR + L
Sbjct: 119 HSTGFYTGKPGYKLCLRLHIQPPNAQRCANYISLFVHMMQGDYDSHLPWPFQGTIRLSIL 178
Query: 391 NTS 393
+ S
Sbjct: 179 DQS 181
>gi|338720096|ref|XP_003364120.1| PREDICTED: TNF receptor-associated factor 3 [Equus caballus]
Length = 485
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 195/473 (41%), Gaps = 70/473 (14%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIIKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLKYSQPSVEDITDSPTSSFRNT 128
+REIL + C + C QL++ H+ N C F
Sbjct: 105 CCKREILALQIYCRNESRGCVEQLTLGHLLVHLKNDC------------------QFEEL 146
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCRE------VFKSQALLEKH 182
+ + + + K+L +H+ CK+ + C + Q L ++
Sbjct: 147 ACVRPDCKE-KVLRKD-LRDHVEK--------ACKYREATCSHCKSQVPMITLQVSLLQN 196
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HESKL 236
++ + ++ L N+ CS + R + S Q+ I++ K KE E +
Sbjct: 197 ESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRP 256
Query: 237 WDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKV 287
+ N +A KSS E + K+ G + L+ ++ +Q + I++
Sbjct: 257 FRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRL 316
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGY 346
+ +L + E N GV WK+ ++ + +E + YS FY+ FGY
Sbjct: 317 ADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGY 369
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEI 402
+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D
Sbjct: 370 KMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAF 429
Query: 403 QSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 430 KPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 477
>gi|449280670|gb|EMC87906.1| TNF receptor-associated factor 3 [Columba livia]
Length = 567
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 123/536 (22%), Positives = 204/536 (38%), Gaps = 115/536 (21%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+++ + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMNALLSSSSPK-CTACQESIVKDKVFKDNC 104
Query: 73 TRREIL--------ENN-----------------------LTCPYKQCSSQLSIPEYESH 101
RRE+L EN L+CP C ++ + H
Sbjct: 105 CRRELLALQIYCRNENKGCKEQLSLGQLLMHLKTDCQFEELSCPRADCKEKILRKDLPDH 164
Query: 102 V--------NTC-YLKYSQPSV----EDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPE 148
V TC Y K P + + TD P P K T+
Sbjct: 165 VEKTCKYRETTCKYCKSQVPMIMLQKHEDTDCPCVMV----SCP-----HKCSVKTLMRS 215
Query: 149 HLNMQGSSNENFP--CKFYQVGC---------------------------REVFKSQALL 179
LN S N P C F + GC +++ L
Sbjct: 216 ELNAHLSECINAPSTCSFKRYGCTFQGTNQQIKAHEASSAVQHVNLLKEWSNALENKVAL 275
Query: 180 EKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HE 233
++ L+ + ++ L N+ CS + R + S Q+ I++ K KE E
Sbjct: 276 LQNESLEKNKSIQTLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKE 335
Query: 234 SKLWDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQK 284
+ + N +A KSS E + KT G + L+ ++ +Q +
Sbjct: 336 IRPFRQNWEEADSMKSSVESLQNRVTELESVDKTSGQGARNTSLLETQLSRHDQMLSVHD 395
Query: 285 IKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSC 343
I++ + +L + E N GV WK+ ++ + +E + YS FY+
Sbjct: 396 IRLADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGY 448
Query: 344 FGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSIT 399
FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ S +
Sbjct: 449 FGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGPSRRHLG 508
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
D + D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 509 DAFKPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
>gi|392936119|gb|AFM93124.1| TNF receptor-associated factor 6, partial [Zonosaurus ornatus]
Length = 206
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE V + CNG++ WK+ NF LK +E +S
Sbjct: 67 METQNTQMGDLKRTIRNLEEKMAEVEAQQCNGIFIWKIENFSIYLKAQEEEKPVVIHSPG 126
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+FC R++I ++Q Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 127 FYTGKPGYKFCLRLHIQLPNSQRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQS 185
>gi|392936131|gb|AFM93130.1| TNF receptor-associated factor 6, partial [Crocodylus porosus]
Length = 200
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M +M+E K + N E + + E + CNG+Y WK+ NF +
Sbjct: 52 HQIRELIAKMETQSSNMVELKRTIRNLEGKIAEME-------AQQCNGIYIWKIENFSSL 104
Query: 324 LKEMKEINRYF-YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ ++SLF+H +QGE D L
Sbjct: 105 LKAQEEERPVVTHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQGEYDSYLP 164
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 165 WPFQGTIRLSILDQS 179
>gi|403279893|ref|XP_003931477.1| PREDICTED: TNF receptor-associated factor 4 [Saimiri boliviensis
boliviensis]
Length = 470
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 189/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC N + +P
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTC---------------------NFNVVP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|50748724|ref|XP_421378.1| PREDICTED: TNF receptor-associated factor 3 [Gallus gallus]
Length = 567
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 203/536 (37%), Gaps = 115/536 (21%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+++ + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHFILCNPKQTECGHRFCETCMNALLSTPSPK-CTACQESIVKDKVFKDNC 104
Query: 73 TRREIL--------ENN-----------------------LTCPYKQCSSQLSIPEYESH 101
RRE+L EN L CP C ++ + H
Sbjct: 105 CRRELLALQIYCRNENKGCKEQLSLGQLLMHLKTDCQFEELPCPRADCKEKILRKDLPDH 164
Query: 102 V--------NTC-YLKYSQPSV----EDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPE 148
V TC Y K P + + TD P P K T+
Sbjct: 165 VEKTCKYRETTCKYCKSQVPMIMLQKHEDTDCPCVMV----SCP-----HKCSVKTLMRS 215
Query: 149 HLNMQGSSNENFP--CKFYQVGC---------------------------REVFKSQALL 179
LN S N P C F + GC +++ L
Sbjct: 216 ELNAHLSECINAPSTCSFKRYGCTFQGTNQQIKAHEASSAVQHVNLLKEWSNALENKVAL 275
Query: 180 EKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HE 233
++ L+ + ++ L N+ CS + R + S Q+ I++ K KE E
Sbjct: 276 LQNESLEKNKSIQTLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKE 335
Query: 234 SKLWDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQK 284
+ + N +A KSS E + KT G + ++ ++ +Q +
Sbjct: 336 IRPFRQNWEEADSMKSSVESLQNRVTELESVDKTAGQGARNTSMLETQLSRHDQMLSVHD 395
Query: 285 IKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSC 343
I++ + +L + E N GV WK+ ++ + +E + YS FY+
Sbjct: 396 IRLADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGY 448
Query: 344 FGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSIT 399
FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ S +
Sbjct: 449 FGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGPSRRHLG 508
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
D + D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 509 DAFKPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
>gi|341931943|gb|AEL04280.1| TNF receptor-associated factor 6, partial [Leiocephalus
barahonensis]
Length = 213
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ +F+ ++ EE + + CNG++ WK+ +F LK +E+ +S
Sbjct: 74 METQSTQIGDFKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSIYLKAQEEVRPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQLPNAPRCANYISLFVHIMQGEYDSHLSWPFQGTIRLSILDQS 192
>gi|308368800|gb|ADO30317.1| TNF receptor-associated factor 6 [Liotyphlops albirostris]
Length = 201
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E K+ EIE + CNGV+ WK+ NF
Sbjct: 53 HQIRELTAKMETQNSQMGDLKRTIRNLE---KKMAEIE----AQQCNGVFLWKIENFSMH 105
Query: 324 LK-EMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK + +EI +S FY+ GY+ C R++I +AQ Y+SLF+H +QG+ D L
Sbjct: 106 LKAQEEEIPVVIHSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGDYDSHLP 165
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 166 WPFQGTIRLSILDQS 180
>gi|395505623|ref|XP_003757139.1| PREDICTED: TNF receptor-associated factor 1 [Sarcophilus harrisii]
Length = 568
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R++ L+Q++ ++ + + E +L EE +GVY WK+ NF + E
Sbjct: 386 QRVIDLQQTLAQKDLALTKLEQSLHLLEEAS-------YDGVYLWKITNFTRRCHE-SAC 437
Query: 331 NRY--FYSACFYSSCFGYRFCTRVNIS---REDAQYLSLFIHLVQGENDDILDWPFVGRI 385
R S FY++ +GY+ C R+ S +LSLFI +++GE D +L+WPF ++
Sbjct: 438 GRMISLLSPAFYTARYGYKLCLRIYFSGGGTRKGTHLSLFIVVMKGEYDALLEWPFRNKV 497
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F L+ ++ + D D DSF+RP + A G F + + P ++
Sbjct: 498 TFMLLDQNNREHVIDSFHPDLTSDSFQRPQGE--SNTAIGRPMFFPLNKLQSPKHAYVKN 555
Query: 446 DDTFV 450
D F+
Sbjct: 556 DTVFL 560
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-------------DEK 60
+P++ C C LK A T CGH++C+AC+ SWI KN PI DE
Sbjct: 126 EPKYLCCGCHNVLKKAQQTLCGHRYCSACL-SWIVRISKN--PICSRCKEENPQTVGDES 182
Query: 61 VLTKDDIFIDNYTRREILENNLTCPYKQCS 90
L+++ FID +EI E ++ C C
Sbjct: 183 FLSEEKAFIDAAINKEISELSVHCVISGCG 212
>gi|45387923|ref|NP_991325.1| TNF receptor-associated factor 4 [Danio rerio]
gi|32698426|emb|CAD89005.1| TRAF4 protein [Danio rerio]
gi|41944600|gb|AAH65969.1| Tnf receptor-associated factor 4a [Danio rerio]
Length = 470
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 196/483 (40%), Gaps = 87/483 (18%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RFQCPLCSKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++IL + C + + C + + +SH +TC IP
Sbjct: 74 QQILALPIRCIHSEEGCRWTGQMKQLQSHFSTCAFNV---------------------IP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R S LT PEHL C+F C F +A E H + + S +
Sbjct: 113 CPNRCSVKLTRRDLPEHLQ-HDCPKRKVKCEF----CGSEFTGEA-YENHQGICPQESVY 166
Query: 191 LE-----LLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD---PNK- 241
E + + S + T P + KE ++N ++ + PN+
Sbjct: 167 CENKCGARMMRRLLSQHTM-TECPKRTQPCKYCGKEFVYDTIQNHQYHCPRFPVQCPNQC 225
Query: 242 ---NQAGDDKSS----------------EGDCS--CKTCGDNSHLLKLVYERMVLLEQSM 280
N A +D ++ E C C HL + + ++ +
Sbjct: 226 GTPNIAREDLANHVKESCGSALVLCPFKEAGCKHRCPKMAIGRHLEESTKSHLTMMCSLV 285
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACF 339
Q+ ++ +++ D V++ WK+ ++ KL+E K N + F+S F
Sbjct: 286 GRQRQEILELRREMEELSVSHDGVLI--------WKLTDYSRKLQEAKLRNNHEFFSPPF 337
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ + + +LS++I ++ GE D++L+WPF ++ F+ L+ S
Sbjct: 338 YTHRYGYKLQVSAFLNGNGSGEGSHLSIYIRVLPGEYDNLLEWPFSYKVTFSILDQSDPS 397
Query: 397 -----SITDEIQSDKNFDSFKRPV----NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
IT+ D N+ +F++P + + FG+ FI ++ R ++ ++
Sbjct: 398 LSKPQHITETFNPDPNWKNFQKPCSSRNSLDESTLGFGYPKFISHEEIKK--RNYIRDNS 455
Query: 448 TFV 450
F+
Sbjct: 456 IFL 458
>gi|326921068|ref|XP_003206786.1| PREDICTED: TNF receptor-associated factor 3-like isoform 1
[Meleagris gallopavo]
Length = 567
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 203/536 (37%), Gaps = 115/536 (21%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+++ + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHFILCNPKQTECGHRFCETCMNALLSTPSPK-CTACQESIVKDKVFKDNC 104
Query: 73 TRREIL--------ENN-----------------------LTCPYKQCSSQLSIPEYESH 101
RRE+L EN L CP C ++ + H
Sbjct: 105 CRRELLALQIYCRNENKGCKEQLSLGQLLMHLKTDCQFEELACPRADCKEKILRKDLPDH 164
Query: 102 V--------NTC-YLKYSQPSV----EDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPE 148
+ TC Y K P + + TD P P K T+
Sbjct: 165 IEKTCKYRETTCKYCKSQVPMIMLQKHEDTDCPCVMV----SCP-----HKCSVKTLMRS 215
Query: 149 HLNMQGSSNENFP--CKFYQVGC---------------------------REVFKSQALL 179
LN S N P C F + GC +++ L
Sbjct: 216 ELNAHLSECINAPSTCSFKRYGCTFQGTNQQIKAHEASSAVQHVNLLKEWSNALENKVAL 275
Query: 180 EKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN----QKEIEAYLMKNKE--HE 233
++ L+ + ++ L N+ CS + R + S Q+ I++ K KE E
Sbjct: 276 LQNESLEKNKSIQTLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKE 335
Query: 234 SKLWDPNKNQAGDDKSS---------EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQK 284
+ + N +A KSS E + KT G + ++ ++ +Q +
Sbjct: 336 IRPFRQNWEEADSMKSSVESLQNRVTELESVDKTAGQGARNTSMLETQLSRHDQMLSVHD 395
Query: 285 IKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSC 343
I++ + +L + E N GV WK+ ++ + +E + YS FY+
Sbjct: 396 IRLADMDLRFQVLETASYN-------GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGY 448
Query: 344 FGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSIT 399
FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++ S +
Sbjct: 449 FGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGPSRRHLG 508
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
D + D N SFK+P A G F+ VL+ G ++DDT IK V
Sbjct: 509 DAFKPDPNSSSFKKPTGEM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
>gi|155372275|ref|NP_001094750.1| TNF receptor-associated factor 4 [Bos taurus]
gi|154425549|gb|AAI51615.1| TRAF4 protein [Bos taurus]
gi|440912264|gb|ELR61848.1| TNF receptor-associated factor 4 [Bos grunniens mutus]
Length = 470
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 187/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L ++ C + + C + + H+NTC +P
Sbjct: 74 VQVLGLSIRCIHSEEGCRWNGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E F+S + +
Sbjct: 113 CPNRCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAFESHEGVCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|170716466|gb|ACB31935.1| TNF receptor-associated factor 6 [Coluber constrictor]
Length = 211
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 72 METQQSQMGDLKRTIRTLEEKXADIEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G +R + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTMRLSILDQS 190
>gi|296476876|tpg|DAA18991.1| TPA: TNF receptor-associated factor 4 [Bos taurus]
Length = 470
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 187/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L ++ C + + C + + H+NTC +P
Sbjct: 74 VQVLGLSIRCIHSEEGCRWNGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E F+S + +
Sbjct: 113 CPNRCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAFESHEGVCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|359320300|ref|XP_003435282.2| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 4
[Canis lupus familiaris]
Length = 462
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 185/476 (38%), Gaps = 81/476 (17%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P +SH+NTC IP
Sbjct: 74 VQVLSLAIRCIHSEEGCRWSGPLRHLQSHLNTCSFNV---------------------IP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E F+S + +
Sbjct: 113 CPNRCPTKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAFESHEGVCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHAASECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGDC------SCKT-----------------CGD---NSHLLKLVYERMVLLEQSMLE 282
+ D SC T C D + HL + V + ++ +
Sbjct: 230 VAREDLPGHLKESCSTALVLCPFKDSGCKHRVRCXDVLLSRHLGESVKPHLAMMCALVSR 289
Query: 283 QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYS 341
Q+ ++ L++ D GV WK+ ++ +L+E K + N +S FY+
Sbjct: 290 QRQELQEMRRELEELSVGSD--------GVLIWKIGSYGRRLQEAKAKPNLECFSPAFYT 341
Query: 342 SCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSI 398
+GY+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 342 HKYGYKLQVYAFLXWHGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSD---- 397
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D N+ F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 398 -PALHPDPNWKDFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 450
>gi|392936111|gb|AFM93120.1| TNF receptor-associated factor 6, partial [Colobosaura modesta]
Length = 195
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE +V + CNG++ WK+ NF LK +E +S
Sbjct: 56 MENQNTQMRDLKRTIRNLEEKIADVESQQCNGIFVWKIENFSIYLKAQEEERPVVIHSPG 115
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSS 394
FY+ GY+ C R++I +AQ Y+SLF+H +QG++D L WPF G IR + L+ S
Sbjct: 116 FYTGKPGYKLCMRLHIQSPNAQRCANYISLFVHTMQGDHDSHLPWPFQGTIRLSILDQSE 175
Query: 395 EF 396
F
Sbjct: 176 GF 177
>gi|432889801|ref|XP_004075368.1| PREDICTED: TNF receptor-associated factor 4-like [Oryzias latipes]
Length = 470
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 189/482 (39%), Gaps = 85/482 (17%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RFQCPLCSKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++IL + C + + C + + + H +TC IP
Sbjct: 74 QQILSLPIRCIHSEEGCRWTGQMKQLQGHFSTCAFNV---------------------IP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R S LT P+HL C+F C F +A E H + + S +
Sbjct: 113 CPNRCSVKLTRRDLPDHLQ-HDCPKRKVKCEF----CGSEFTGEAF-ENHQGVCPQESVY 166
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMK---------NKEHESKLWDPNK 241
E NK C HG + + + Y K ++ H +
Sbjct: 167 CE---NK-CGARMMRRLLSQHGMAECPKRTQPCKYCGKEFVFDTIQNHQFHCPRFPVQCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
NQ G + D C K G KL R LE +
Sbjct: 223 NQCGTPNIAREDLANHVKDNCGSALVLCPFKDAGCKHRCPKLAIGRH--LEDTTKSHLTM 280
Query: 287 VNNFELNLKQ-----TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFY 340
+ N +Q E+E+ V +GV WK+ ++ KL+E K N F+S FY
Sbjct: 281 MCNLVSRQRQEILELRREMEELSVSH--DGVLIWKLNDYSRKLQEAKLRSNHEFFSPPFY 338
Query: 341 SSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF- 396
+ +GY+ + + +LS++I ++ GE D++L+WPF ++ F+ L+ S
Sbjct: 339 THRYGYKLQVSAFLNGNGSGEGSHLSVYIRVLPGEYDNLLEWPFSYKVTFSILDQSDPSL 398
Query: 397 ----SITDEIQSDKNFDSFKRPV----NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
IT+ D N+ +F++P + + FG+ FI ++ R ++ ++
Sbjct: 399 SKPQHITETFNPDPNWKNFQKPCSTRNSLDESTLGFGYPKFISHEEIKK--RNYIRDNCI 456
Query: 449 FV 450
F+
Sbjct: 457 FI 458
>gi|445066189|gb|AGE13925.1| tumor necrosis factor receptor-associated factor 6, partial
[Cirrhinus mrigala]
Length = 119
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ T CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 4 LESKYECPICLMGLRSAVQTPCGHRFCESCIKKSIRDTGQK-CPVDNEVLLEEQLFPDNF 62
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ 111
+REIL + CP CS ++ + + E H + C Q
Sbjct: 63 AKREILSLTVRCPNAGCSDKMELRQLEKHSSQCKFATVQ 101
>gi|170716488|gb|ACB31946.1| TNF receptor-associated factor 6 [Lampropeltis getula]
Length = 200
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 61 METQHSQMGDLKRTIRTLEEKMADIEAQQCNGIFLWKIENFSAYLKAQEEERAVVIHSPG 120
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 121 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 179
>gi|392936105|gb|AFM93117.1| TNF receptor-associated factor 6, partial [Phelsuma lineata]
Length = 203
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + N + ++ EE V + CNG++ WK+ F LK +E
Sbjct: 69 LTAKMETQXRHMENLKCTIRNLEEKMTEVEAQQCNGIFIWKIEKFSIYLKAQEEERPVVL 128
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE+D+ L WPF G IR + L
Sbjct: 129 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEHDNYLPWPFQGTIRLSIL 188
Query: 391 NTS 393
+ S
Sbjct: 189 DQS 191
>gi|348505542|ref|XP_003440320.1| PREDICTED: TNF receptor-associated factor 4 [Oreochromis niloticus]
Length = 470
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 192/490 (39%), Gaps = 101/490 (20%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RFQCPLCSKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++IL + C + + C + + + H +TC IP
Sbjct: 74 QQILALPIRCIHSEEGCRWTGQMKQLQGHFSTCAFNV---------------------IP 112
Query: 133 TNKRNSKILTVTVFPEHLN----------------MQGSSNENFP--CKFYQVGC----- 169
R S LT P+HL G + EN C V C
Sbjct: 113 CPNRCSVKLTRRDLPDHLQHDCPKRKVKCEFCGSEFTGEAYENHQGVCPQESVYCENKCG 172
Query: 170 ----REVFKSQALLE------------KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR 213
R + ++ E K + T + + ++ TP+ R
Sbjct: 173 ARMMRRLLSQHSMAECPKRTQPCKYCGKEFVFDTIQNHQYHCPRFPVQCPNQCGTPNIAR 232
Query: 214 QDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERM 273
+D +N MK+ + + P K+ + C HL +
Sbjct: 233 EDLANH-------MKDNCGSALVLCPFKDAGCKHR-------CPKLAIGRHLEDTTKSHL 278
Query: 274 VLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINR 332
++ + Q+ ++ L+ E+E+ V +GV WK+ ++ KL+E K N
Sbjct: 279 TMMCNLVGRQRQEI------LELRREMEELSVSH--DGVLIWKLSDYSRKLQEAKLRSNH 330
Query: 333 YFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTA 389
F+S FY+ +GY+ + + +LS++I ++ GE D++L+WPF ++ F+
Sbjct: 331 EFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSVYIRVLPGEYDNLLEWPFSYKVTFSI 390
Query: 390 LNTSSEF-----SITDEIQSDKNFDSFKRPV----NFFLNKKAFGFNNFIRVADVLDPGR 440
L+ S IT+ D N+ +F++P + + FG+ FI ++ R
Sbjct: 391 LDQSDPSLSKPQHITETFNPDPNWKNFQKPCSSRNSLDESTLGFGYPKFISHEEIKK--R 448
Query: 441 GFLMEDDTFV 450
++ ++ F+
Sbjct: 449 NYIRDNCIFI 458
>gi|308368762|gb|ADO30298.1| TNF receptor-associated factor 6 [Varanus exanthematicus]
Length = 202
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M E K + N E + + E E CNG++ WK+ NF A
Sbjct: 54 HQIRELIAKMETQNSQMGELKRTIRNLEDQIAEIEAQE-------CNGIFIWKITNFNAY 106
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ Y+SLF+H +QG D +L
Sbjct: 107 LKAQEEEKPVVIHSPGFYTGRPGYKLCMRLHIQLPNAQRCANYISLFVHTMQGNYDSLLP 166
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ +
Sbjct: 167 WPFQGTIRLSILDQT 181
>gi|170716434|gb|ACB31919.1| TNF receptor-associated factor 6 [Varanus salvator]
Length = 202
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M E K + N E + + E E CNG++ WK+ NF A
Sbjct: 54 HQIRELIAKMETQNSQMGELKRTIRNLEDQIAEIEAQE-------CNGIFIWKITNFNAY 106
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ Y+SLF+H +QG D +L
Sbjct: 107 LKAQEEEKPVVIHSPGFYTGRPGYKLCMRLHIQLPNAQRCANYISLFVHTMQGNYDSLLP 166
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ +
Sbjct: 167 WPFQGTIRLSILDQT 181
>gi|308368760|gb|ADO30297.1| TNF receptor-associated factor 6 [Varanus acanthurus]
Length = 200
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M E K + N E + + E E CNG++ WK+ NF A
Sbjct: 52 HQIRELIAKMETQNSQMGELKRTIRNLEDQIAEIEAQE-------CNGIFIWKITNFNAY 104
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ Y+SLF+H +QG D +L
Sbjct: 105 LKAQEEEKPVVIHSPGFYTGRPGYKLCMRLHIQLPNAQRCANYISLFVHTMQGNYDSLLP 164
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ +
Sbjct: 165 WPFQGTIRLSILDQT 179
>gi|170716484|gb|ACB31944.1| TNF receptor-associated factor 6 [Imantodes cenchoa]
Length = 208
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 69 METQHSQMGDLKRTIRTLEEKIADIGAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 128
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 129 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 187
>gi|170716472|gb|ACB31938.1| TNF receptor-associated factor 6 [Diadophis punctatus]
Length = 202
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 63 METQHSQMGDLKRTIRTLEEKIADIGAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 122
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 123 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 181
>gi|341931947|gb|AEL04282.1| TNF receptor-associated factor 6, partial [Leiosaurus
catamarcensis]
Length = 211
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + + + ++ EE + + CNG++ WK+ +F LK +E N +S
Sbjct: 74 METQNSHMGDLKRTIRNLEEKITEIEAQQCNGIFIWKIEHFSVYLKAQEEENPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQPPNAQRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQS 192
>gi|308368790|gb|ADO30312.1| TNF receptor-associated factor 6 [Lacerta viridis]
Length = 198
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M++ K + N E + + E + CNG++ WK+ NF
Sbjct: 51 HQIRELIAKMETQNTQMVDLKRTIQNLEEKIAEMES-------QQCNGIFLWKIENFSVY 103
Query: 324 LKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDW 379
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H +QG D L W
Sbjct: 104 LRAQEERPVVIHSPGFYTGKPGYKLCLRLHIQSPNAQRCANYISLFVHTMQGHYDSHLPW 163
Query: 380 PFVGRIRFTALNTS 393
PF G IR + L+ S
Sbjct: 164 PFQGTIRLSILDQS 177
>gi|170716454|gb|ACB31929.1| TNF receptor-associated factor 6 [Azemiops feae]
Length = 211
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 72 METQQNQMGDLKRTIRTLEEKIADIEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|392936121|gb|AFM93125.1| TNF receptor-associated factor 6, partial [Alligator
mississippiensis]
Length = 200
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M +M+E K + N E + + E + CNG+Y WK+ NF +
Sbjct: 52 HQIRELIAKMETQSINMVELKRTIRNLEGKVAEME-------AQQCNGIYIWKIENFSSL 104
Query: 324 LKEMKEINRYF-YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ ++SLF+H +QGE D L
Sbjct: 105 LKAQEEERPVVTHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQGEYDSYLP 164
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 165 WPFQGTIRLSILDQS 179
>gi|348567963|ref|XP_003469768.1| PREDICTED: TNF receptor-associated factor 4-like [Cavia porcellus]
Length = 470
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 187/474 (39%), Gaps = 69/474 (14%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC + + +P
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTC---------------------SYNVVP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCNKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMV----LLEQSMLEQKIKVNN 289
+ D C K G KL R V +M+ +
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHVEDSVKPHLAMMCALVSRQR 289
Query: 290 FELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRF 348
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY+
Sbjct: 290 QELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKL 346
Query: 349 CTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITD 400
+ + +LSL+I ++ G D++L+WPF R+ F+ L+ S +T+
Sbjct: 347 QVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTE 406
Query: 401 EIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 407 TFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|341931995|gb|AEL04306.1| TNF receptor-associated factor 6, partial [Urostrophus vautieri]
Length = 213
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + + + ++ EE + + CNG++ WK+ +F LK +E N +S
Sbjct: 74 METQNSHMGDLKRTIRNLEEKITEIEAQQCNGIFIWKIEHFSVYLKAQEEENPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQPPNAQRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQS 192
>gi|157819919|ref|NP_001100487.1| TNF receptor-associated factor 4 [Rattus norvegicus]
gi|149053499|gb|EDM05316.1| Tnf receptor associated factor 4 (predicted), isoform CRA_b [Rattus
norvegicus]
gi|171846891|gb|AAI62047.1| Tnf receptor associated factor 4 [Rattus norvegicus]
Length = 470
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 190/483 (39%), Gaps = 87/483 (18%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC +P
Sbjct: 74 VQVLGLAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R L+ P HL C+F GC F +A E H + + S +
Sbjct: 113 CPNRCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCD--FSGEAY-ESHEGVCPQESVY 166
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN------KEHE---SKLWDPNK 241
E NK C H + + + AY K + H+ +L P
Sbjct: 167 CE---NK-CGARMMRRLLAQHATSECPKRTQPCAYCTKEFVYDTIQSHQYQCPRLPVPCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------M 280
NQ G + D C K G KL R V E+S M
Sbjct: 223 NQCGVGTVAREDLPTHLKDSCSTAFVLCPFKESGCKHRCPKLAMGRHV--EESVKPHLAM 280
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACF 339
+ + EL + E+E+ V +GV WK+ ++ +L+E K + N +S F
Sbjct: 281 MCALVSRQRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAF 337
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ + + +LS++I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 338 YTHKYGYKLQVSAFLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPG 397
Query: 397 -----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D
Sbjct: 398 LAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDA 455
Query: 448 TFV 450
F+
Sbjct: 456 VFI 458
>gi|170716480|gb|ACB31942.1| TNF receptor-associated factor 6 [Heterodon platirhinos]
Length = 205
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 66 METQHSQMGDLKRTIRTLEEKIADIGAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 125
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 126 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 184
>gi|308368772|gb|ADO30303.1| TNF receptor-associated factor 6 [Gonatodes albogularis]
Length = 196
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 57 METQNTLMGNLKRTVRNLEEKITEIESQQCNGIFIWKIENFSMYLKAQEEERPVVIHSPG 116
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QGE+D L WPF G IR + L+ S
Sbjct: 117 FYTGRPGYKLCLRLHIQSPSAQRCANYISLFVHTMQGEHDSHLPWPFQGTIRLSILDQS 175
>gi|170716494|gb|ACB31949.1| TNF receptor-associated factor 6 [Rena humilis]
Length = 211
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ +F+ ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQIGDFKRTIRNLEEKLAEIEAQQCNGIFLWKIENFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|170716430|gb|ACB31917.1| TNF receptor-associated factor 6 [Anolis carolinensis]
Length = 200
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V + + +K EE + + CNG++ WK+ +F LK ++E +S
Sbjct: 61 METQNSQVGDLKGTIKNLEEKITELEAQQCNGIFIWKIEHFSVYLKALEEERPVVIHSPG 120
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I + Q Y+SLF+H++QGE D+ L WPF G IR + L+ S
Sbjct: 121 FYTGKPGYKLCMRLHIQLPNVQRCANYISLFVHIMQGEYDNYLPWPFQGTIRLSVLDQS 179
>gi|340377026|ref|XP_003387031.1| PREDICTED: hypothetical protein LOC100636957 [Amphimedon
queenslandica]
Length = 890
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 184/464 (39%), Gaps = 84/464 (18%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD 65
NK +L+ ++ C +C L++A+ SCGH+ C+ C +
Sbjct: 23 AGKNKDHLE-KYSCPVCACILQEAVQISCGHRLCSHCAE--------------------- 60
Query: 66 DIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSF 125
NY R L+ + CP K C +L TC + S+
Sbjct: 61 -----NYFPRTKLKETVVCPDKDCGQEL----------TCNFFFPDQSI----------C 95
Query: 126 RNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL 185
+ + K S LT PE + Q S +E +P G + S+ + L
Sbjct: 96 KEIKKLTFKKGCSSDLTDHYCPEVKHPQ-SHDEKYPTPETSPGKYDFISSKVIKPT---L 151
Query: 186 KTSFHLELLFNKYCSDGSQSTNTPSHGR----QDTSNQKEIEAYLMKNKEHESKLWDPNK 241
K + HL + N +S ++ S G ++ I +++ + +E
Sbjct: 152 KENHHL--IANLALPSPVKSAHSYSEGDDLFVSSCGDKNYIRRFVLPERPNEIL-----H 204
Query: 242 NQAGDDKSSEGDC--SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEE 299
++ + + S C +C+ GD+ L ++M LE++ KVN+ E + E
Sbjct: 205 DEISERRRSVELCYAACQVRGDDQDL----QDKMDQLERNNTALIDKVNDVESRITTLER 260
Query: 300 IEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED 358
+ N WK+ ++ + S+ FYS+ GY+ C + I +
Sbjct: 261 VT-------FNSTKVWKIDQLQQRMNDASAGKCTSIDSSPFYSNPHGYKMCLCLYILGDG 313
Query: 359 ---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPV 415
++SLF +++GE D+IL WPF ++ FT +N + D Q D SF++P
Sbjct: 314 IGKGTHMSLFFVVMKGEFDNILQWPFTHKVTFTLINQCGARDVVDVFQPDPLSSSFQKPK 373
Query: 416 NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
+ A GF F+ + +++ G +EDD IK +V ++
Sbjct: 374 SDM--NVASGFPRFVSIKELMQDG---FIEDDAIFIKAEVDTVS 412
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 166/417 (39%), Gaps = 61/417 (14%)
Query: 87 KQCSSQLSIPEYESHVN-------TCYLKYSQPSVEDITDS---PTSSFRNTSGIPTNKR 136
K C+ S EY+SHV+ TC LK E+ + S P S SG P
Sbjct: 476 KHCNQAFSPLEYQSHVDQCPEMTVTCPLKDHGCETEEESSSLQKPKSDMNAASGCPRFVS 535
Query: 137 NSKILTVT-VFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLF 195
++++ + + + ++ + C + E F + ++ +++L L
Sbjct: 536 MNELMEGGFIVDDTIFIKVKVDTATICDPWHHDGIESFTAVLIIAL-----CTYYLSL-- 588
Query: 196 NKYCSDGSQSTNTP--SHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGD 253
+C+ + TP S G+ D + K + L +N + P+ ++ S D
Sbjct: 589 -NHCNHHDPAHPTPETSPGKYDFISSKVKKPTLKENHLLIANSALPSPVKSAHSYSESHD 647
Query: 254 CSCKTCGDNSHLLKLVYERMV--LLEQSMLEQKI-------------------KVNNFEL 292
+CGD ++L + V +L + E++ K+ E
Sbjct: 648 LIVSSCGDKNYLRRFVLAERPNEILHDEIPERRSMELCYAPCQVRGDDQDLQDKIGQLER 707
Query: 293 N----LKQTEEIEDNVVL---KLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCF 344
N + + ++E + N WK+ ++ + N S+ FYS+
Sbjct: 708 NNTALIDKVNDVESRITTLERATFNATKVWKIKQLQQQINDAMAGNCTSIDSSPFYSNPL 767
Query: 345 ---GYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSI 398
GY+ C R+ I + ++SLF +++GE D+IL WPF ++ F +N I
Sbjct: 768 NSHGYKMCLRLYILGDGIGKGTHMSLFFVVMKGEFDNILQWPFTHKVTFKLINQCGARDI 827
Query: 399 TDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
D Q D SF++P + +G F+ + +++ +G +EDD IK +V
Sbjct: 828 MDVFQPDPFSPSFQKPKSDM--NVPYGCPRFVSIKELM---QGGFIEDDAIFIKAEV 879
>gi|348524394|ref|XP_003449708.1| PREDICTED: TNF receptor-associated factor 2 [Oreochromis niloticus]
Length = 501
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 191/482 (39%), Gaps = 52/482 (10%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGK--NYCPIDE------KVLTK 64
L+ + C+ C L+ CGH+FC+ C + + + N C ++ +L +
Sbjct: 28 LEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNRTVSNGPQKCNACIKEDIFEDPTSILKQ 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYE-SHVNTC-YLKYSQPSVEDITDSPT 122
F DN RRE+ C + C+ + SI EYE +H C ++ PS ++
Sbjct: 88 GCAFPDNAVRREVENLPAVCINESCTWKGSIKEYEMNHEGKCEFMIIPCPSCKERIRFNE 147
Query: 123 SSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKH 182
N P N K P H + +E C Y + C K + EK+
Sbjct: 148 QERHNERECPERTLNCKYCKE---PFHFKNIKAHDEI--CPKYPMICEGCAKKKIPREKY 202
Query: 183 YD---LKTSFHLELLFNKYCSDGS-QSTNTPSHGRQDTSNQKEIEAYL---MKNKEHESK 235
D + F F+ D S + H R + + MK + H K
Sbjct: 203 VDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYAYEHLNLLLHYIMGMKLQLHSEK 262
Query: 236 LWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVL-LEQSMLEQKIKVNNFELNL 294
K + +E + T + +L ER +E S + K+ + E
Sbjct: 263 ----TKVAELGRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALS 318
Query: 295 KQTEEIEDNVVLK-----------------LCNGVYFWKMYNFPAKLKE-MKEINRYFYS 336
+ ++E V LK +GV+ W++ +F K ++ + +S
Sbjct: 319 NKVRQLERTVGLKDLTVAEMEGRLREMSATTFDGVFIWRISDFAKKRQDAIAGRAPAMFS 378
Query: 337 ACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+S +GY+ C R+ ++ + +LSLF +++G +D +L WPF ++ L+ S
Sbjct: 379 PAFYTSKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQS 438
Query: 394 SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKT 453
+ I D + D SF+RPV+ A G F ++ LD G+ + DDT IK
Sbjct: 439 NREHIIDAFRPDVTSSSFQRPVSEM--NIASGCPLFCPLSK-LD-GKNTYIRDDTIFIKA 494
Query: 454 QV 455
V
Sbjct: 495 IV 496
>gi|291236714|ref|XP_002738286.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 532
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 106/526 (20%), Positives = 194/526 (36%), Gaps = 113/526 (21%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+ ++ C+ C L+D + CGH+FC CI+ + I+ D
Sbjct: 23 ISQKYICTFCDHVLRDPFQSYCGHRFCRRCIE--------------------EQIYPDRA 62
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
RE+ + C K+C EY+ H + C KY + + S N
Sbjct: 63 IAREMKTIPVVCENKECPWAGLFSEYQEHEDIC--KYMLVNCQQKGCSHRIPRLNLKTHS 120
Query: 133 TNKRNSKILTVT------VFPE-----------------------------HLNMQGSS- 156
N+ N +++T V+ E H ++G
Sbjct: 121 ENECNMRLITCKYCNTELVYQELKIHYQSCPKMKVRCSYCDIELLRDELSRHTAVEGGDC 180
Query: 157 -NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQ- 214
+ C F+ +GC + + E + ++ H +LL K G+ +T Q
Sbjct: 181 PKKRQMCAFHTIGCNTMVEIGQETENNVS-ESQHHTDLLLRKVTELGNMMISTQERNVQI 239
Query: 215 ---------DTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCS--CKTCGDNS 263
T++ + I+ L K + D + DD + G +
Sbjct: 240 RQLHTAVEGGTTDIQAIQTRLHKVEAEVRACIDAGERSRADDNTDVGKAERLSNEIDQIN 299
Query: 264 HLLKLVYERM-------VLLEQSMLEQKIKVNNFELNLKQTEE----------IEDNVV- 305
H L ++ ++ +L +S+ + NN + N KQ +E +D ++
Sbjct: 300 HKLVVIDRKVCTSQGIVAMLNESVENNSMNTNNVQQNGKQLKEKMQSLEAKCKAQDRIIA 359
Query: 306 -----------------LKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYR 347
+ +G+ WK+ +F K ++ + YS F++S GY+
Sbjct: 360 LKDVAMAEHDLRIRSLEMTSYDGILLWKISDFARKRRDAISGRTPSIYSPYFFTSHHGYK 419
Query: 348 FCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQS 404
C RV ++ + ++SLF +++GE D IL WPF ++ L+ S+ + D +
Sbjct: 420 LCARVYLNGDGMGKGNHVSLFFVVMKGEYDAILKWPFRQKVTLMWLDQSNREHVIDAFRP 479
Query: 405 DKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
D + SFKRP A G F+ + + P R ++ +D FV
Sbjct: 480 DPSSTSFKRPSGDM--NVASGCPLFMPLNTLDMPERQYVKDDVAFV 523
>gi|341931971|gb|AEL04294.1| TNF receptor-associated factor 6, partial [Pristidactylus
torquatus]
Length = 206
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + + + ++ EE + + CNG++ WK+ +F LK +E N +S
Sbjct: 67 METQXSHMGDLKRTIRNLEEKITEIESQQCNGIFIWKIEHFSVYLKAQEEENPVVIHSPG 126
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 127 FYTGKPGYKLCMRLHIQPPNAQRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQS 185
>gi|308368782|gb|ADO30308.1| TNF receptor-associated factor 6 [Feylinia polylepis]
Length = 213
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ EE + + CNG++ WK+ NF LK +E
Sbjct: 70 LTAKMETQVTHIGDLKRTIRNLEEKIAEIEAQQCNGIFIWKIENFSIYLKAQEEERPVVI 129
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 130 HSPGFYTGKPGYKLCLRLHIQSPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 189
Query: 391 NTS 393
+ S
Sbjct: 190 DQS 192
>gi|170716470|gb|ACB31937.1| TNF receptor-associated factor 6 [Daboia russellii]
Length = 211
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE + + CNG++ WK+ NF A LK +E +S
Sbjct: 72 METQQNQMGDLKRTIRTLEEKMADTEAQQCNGIFLWKIENFSAYLKAQEEEKPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|432884717|ref|XP_004074555.1| PREDICTED: TNF receptor-associated factor 2-like [Oryzias latipes]
Length = 501
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 202/494 (40%), Gaps = 76/494 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGK--NYCPIDE------KVLTK 64
L+ + C+ C L+ I CGH+FC+ C + + + N C +E +L +
Sbjct: 28 LEDKHLCNCCHNILRRPIQAQCGHRFCSYCFNRTVSNGPQKCNACIKEEIFEEPTSILKQ 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYE-SHVNTC-YLKYSQPSVEDITDSPT 122
F DN RRE+ + C + C + +I EYE H C ++ PS ++
Sbjct: 88 GCAFPDNAVRREVEGLSADCINENCPWKGTIKEYELDHEGKCEFMIIPCPSCKERIRFSE 147
Query: 123 SSFRNTSGIPTNKRNSKILTVT-----------VFPEH-LNMQGSSNENFP--------- 161
+ P N K + P++ + +G + + P
Sbjct: 148 QERHSERECPERTLNCKYCKEPFHFKNIKAHDEICPKYPMICEGCAKKKIPREKYVDHIK 207
Query: 162 --------CKFYQVGCREVFKSQALLEKHYDLKTSF---HLELLFNKYCSDG----SQST 206
C+F+ VGC + EK +D + +F HL LL + S+ T
Sbjct: 208 FCSKFRTPCRFHVVGCDMSVEK----EKIHDHERAFAYEHLNLLLHYIMGMKLQLHSEKT 263
Query: 207 NTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLL 266
GR+ T E+E +K+ E+ + N+ + E + H
Sbjct: 264 KVAELGRRCT----ELE---VKSGTFENVVCVLNREVERFTTTMEAS-------NRQH-- 307
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
KL +++ L + + + V +L + + E + +GV+ W++ +F AK ++
Sbjct: 308 KLDQDKIEALSNKVRQLERTVGLKDLTVAEMEGRLREMAATTFDGVFIWRISDF-AKKRQ 366
Query: 327 MKEINRY--FYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPF 381
R +S FY+S +GY+ C R+ ++ + +LSLF +++G +D +L WPF
Sbjct: 367 DAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGLSDALLKWPF 426
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRG 441
++ L+ S+ I D + D SF+RPV+ A G F ++ LD
Sbjct: 427 NQKVTLMLLDQSNREHIIDAFRPDVTSSSFQRPVSEM--NIASGCPLFCPLSK-LDAKNS 483
Query: 442 FLMEDDTFVIKTQV 455
++ DDT IK V
Sbjct: 484 YI-RDDTIFIKAIV 496
>gi|31543889|ref|NP_033449.2| TNF receptor-associated factor 4 [Mus musculus]
gi|342187070|sp|Q61382.2|TRAF4_MOUSE RecName: Full=TNF receptor-associated factor 4; AltName:
Full=Cysteine-rich motif associated to RING and Traf
domains protein 1
gi|7274404|gb|AAF44757.1|AF233449_1 TNF receptor associated factor 4 [Mus musculus]
gi|26330396|dbj|BAC28928.1| unnamed protein product [Mus musculus]
gi|26334023|dbj|BAC30729.1| unnamed protein product [Mus musculus]
gi|26343851|dbj|BAC35582.1| unnamed protein product [Mus musculus]
gi|148680966|gb|EDL12913.1| Tnf receptor associated factor 4, isoform CRA_a [Mus musculus]
gi|162317890|gb|AAI56639.1| TNF receptor associated factor 4 [synthetic construct]
Length = 470
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 190/483 (39%), Gaps = 87/483 (18%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC +P
Sbjct: 74 VQVLGLAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R L+ P HL C+F GC F +A E H + + S +
Sbjct: 113 CPNRCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCD--FSGEAY-ESHEGVCPQESVY 166
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN------KEHE---SKLWDPNK 241
E NK C H + + + AY K + H+ +L P
Sbjct: 167 CE---NK-CGARMMRRLLAQHATSECPKRTQPCAYCTKEFVYDTIQSHQYQCPRLPVPCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------M 280
NQ G + D C K G KL R V E+S M
Sbjct: 223 NQCGVGTVAREDLPTHLKDSCSTAFVLCPFKESGCKHRCPKLAMGRHV--EESVKPHLAM 280
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACF 339
+ + EL + E+E+ + +GV WK+ ++ +L+E K + N +S F
Sbjct: 281 MCALVSRQRQELQ-ELRRELEELSIGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAF 337
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ + + +LS++I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 338 YTHKYGYKLQVSAFLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPG 397
Query: 397 -----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D
Sbjct: 398 LAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDA 455
Query: 448 TFV 450
F+
Sbjct: 456 VFI 458
>gi|308368768|gb|ADO30301.1| TNF receptor-associated factor 6 [Eublepharis macularius]
Length = 212
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 74 METQNTHMGNLKRTIRNLEEKITEMEAQQCNGIFIWKIENFSIYLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSYLPWPFQGTIRLSILDQS 192
>gi|344290577|ref|XP_003417014.1| PREDICTED: TNF receptor-associated factor 4 [Loxodonta africana]
Length = 470
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 187/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC +P
Sbjct: 74 VQVLGLLIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPTKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGVCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCSKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|392936107|gb|AFM93118.1| TNF receptor-associated factor 6, partial [Brachymeles gracilis]
Length = 204
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ EE + + CNG++ WK+ NF LK +E
Sbjct: 61 LTAKMETQVTHIGDLKRTIRNLEEKVAEIEAQQCNGIFIWKIENFSIYLKAQEEERPVVI 120
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 121 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 180
Query: 391 NTS 393
+ S
Sbjct: 181 DQS 183
>gi|354503623|ref|XP_003513880.1| PREDICTED: TNF receptor-associated factor 4 [Cricetulus griseus]
gi|344258449|gb|EGW14553.1| TNF receptor-associated factor 4 [Cricetulus griseus]
Length = 470
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 189/483 (39%), Gaps = 87/483 (18%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + C + + H+NTC +P
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGQLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R L+ P HL C+F GC F +A E H + + S +
Sbjct: 113 CPNRCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCD--FSGEAY-ESHEGMCPQESVY 166
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN------KEHE---SKLWDPNK 241
E NK C H + + + AY K + H+ +L P
Sbjct: 167 CE---NK-CGARMMRRLLAQHATSECPKRTQPCAYCTKEFVFDTIQSHQYQCPRLPVPCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------M 280
NQ G + D C K G KL R V E+S M
Sbjct: 223 NQCGVGTVAREDLPSHLKDSCSTALVLCPFKESGCKHRCPKLAMARHV--EESVKPHLAM 280
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACF 339
+ + EL + E+E+ + +GV WK+ ++ +L+E K + N +S F
Sbjct: 281 MCALVSRQRQELQ-ELRRELEELSIGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAF 337
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ + + +LS++I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 338 YTHKYGYKLQVSAFLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPG 397
Query: 397 -----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D
Sbjct: 398 LAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDA 455
Query: 448 TFV 450
F+
Sbjct: 456 VFI 458
>gi|341931925|gb|AEL04271.1| TNF receptor-associated factor 6, partial [Corytophanes cristatus]
Length = 213
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSAC 338
M Q ++ + + +K EE + CNG++ WK+ +F LK + +E + +S
Sbjct: 74 METQNSQIGDLKRTIKNLEEKITEIEAGQCNGIFLWKIEHFSIYLKAQEEERSVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSS 394
FY+ GY+ C R++I + +AQ Y+SLF+H++QG+ D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQQPNAQRCANYISLFVHIMQGDYDSHLPWPFQGTIRLSILDQSE 193
Query: 395 EFS 397
S
Sbjct: 194 SSS 196
>gi|341931983|gb|AEL04300.1| TNF receptor-associated factor 6, partial [Takydromus sexlineatus
ocellatus]
Length = 198
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K V N E + + E + CNG++ WK+ NF
Sbjct: 51 HQIRELIAKMETQNNQMGDLKRTVQNLEEKIAEMES-------QQCNGIFLWKIENFSVY 103
Query: 324 LKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDW 379
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H +QG D L W
Sbjct: 104 LRAQEERPVVIHSPGFYTGRPGYKLCLRLHIQSANAQRCPNYISLFVHTMQGHYDSHLPW 163
Query: 380 PFVGRIRFTALNTS 393
PF G IR + L+ S
Sbjct: 164 PFQGTIRLSILDQS 177
>gi|170716504|gb|ACB31954.1| TNF receptor-associated factor 6 [Naja kaouthia]
Length = 210
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSAC 338
M Q+ ++ + + ++ EE ++ CNG++ WK+ NF LK + +E +S
Sbjct: 71 METQQTQMGDLKRTIRTLEEKIADIEAHQCNGIFLWKIENFSVYLKAQEEEKTVVIHSPG 130
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I + Q Y+SLF+H++QG+ D L WPF G IR + L+ S
Sbjct: 131 FYTGXXGYKLCLRLHIQLPNIQRCGNYISLFVHIMQGDYDXHLSWPFQGTIRLSILDQS 189
>gi|341931937|gb|AEL04277.1| TNF receptor-associated factor 6, partial [Gambelia wislizenii]
Length = 213
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V + + ++ EE + + C+G+Y WK+ +F LK +E +S
Sbjct: 74 METQNSQVGDLKRTIRNLEEKXTEMEAQQCSGIYIWKIEHFSVYLKAREEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQS 192
>gi|399931692|gb|AFP57402.1| TNF receptor-associated factor 6, partial [Geocalamus acutus]
Length = 211
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q V + + ++ E+ +V CNG++ WK+ NF LK +E
Sbjct: 68 LTAKMETQNALVGDLKRTIRNLEDKIADVEAHQCNGIFLWKIENFSIHLKAQEEERPVVM 127
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GYR C R+++ +AQ Y+SLF+H++QG+ D L WPF G IR + L
Sbjct: 128 HSPGFYTGRPGYRLCLRLHLQLPNAQRCPNYISLFVHIMQGDYDSHLPWPFQGTIRLSIL 187
Query: 391 NTS 393
+ S
Sbjct: 188 DQS 190
>gi|341931927|gb|AEL04272.1| TNF receptor-associated factor 6, partial [Crotaphytus collaris]
Length = 213
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V + + +K EE + + C+G+Y WK+ +F LK +E +S
Sbjct: 74 METQNSQVGDLKRTIKNLEEKITEMEAQQCSGIYIWKIEHFSVYLKAREEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQS 192
>gi|341931907|gb|AEL04262.1| TNF receptor-associated factor 6, partial [Basiliscus basiliscus]
Length = 213
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSAC 338
M Q ++ + + +K EE + CNG++ WK+ +F LK + +E + +S
Sbjct: 74 METQNSQIGDLKRTIKNLEEKITEIEAGQCNGIFLWKIEHFSIYLKAQEEERSVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSS 394
FY+ GY+ C R++I + +AQ Y+SLF+H++QG+ D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQQPNAQRCANYISLFVHIMQGDYDSHLPWPFQGTIRLSILDQSE 193
Query: 395 EFS 397
S
Sbjct: 194 SSS 196
>gi|170716464|gb|ACB31934.1| TNF receptor-associated factor 6 [Causus defilippi]
Length = 211
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE + + CNG++ WK+ NF A LK +E +S
Sbjct: 72 METQQNQMGDLKRTIRMLEEKIADAEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|392936103|gb|AFM93116.1| TNF receptor-associated factor 6, partial [Teius teyou]
Length = 208
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ EE + + CNG++ WK+ NF LK +E
Sbjct: 65 LTAKMETQVTHIGDLKRTIRNLEEKIAEIEAQQCNGIFIWKIENFSIYLKAQEEERPVVI 124
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 125 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 184
Query: 391 NTS 393
+ S
Sbjct: 185 DQS 187
>gi|170716482|gb|ACB31943.1| TNF receptor-associated factor 6 [Homalopsis buccata]
Length = 208
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 71 METQQSQMGDLKRTIRTLEEKIADIEAQQCNGIFLWKIENFSVYLKAQEEERPVVIHSPG 130
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 131 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 189
>gi|410910220|ref|XP_003968588.1| PREDICTED: TNF receptor-associated factor 4-like [Takifugu
rubripes]
Length = 470
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 182/467 (38%), Gaps = 83/467 (17%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RFQCPLCSKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++IL + C + + C + + + H +TC IP
Sbjct: 74 QQILALAIRCIHSEEGCRWTGQMKQLQGHFSTCAFNV---------------------IP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R S LT P+HL C+F C F +A E H + + S +
Sbjct: 113 CPNRCSVKLTRRDLPDHLQ-HDCPKRKVKCEF----CGSEFTGEAY-ENHQGVCPQESVY 166
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMK---------NKEHESKLWDPNK 241
E NK C HG + + + Y K ++ H +
Sbjct: 167 CE---NK-CGARMMRRLLSQHGMAECPKRTQPCKYCSKEFVFDTIQNHQYHCPRFPVQCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
NQ G + D C K G KL R LE +
Sbjct: 223 NQCGTPNIAREDLANHVKDNCGSALVLCPFKDAGCKHRCPKLAIGRH--LEDTTKSHLTM 280
Query: 287 VNNFELNLKQ-----TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFY 340
+ N +Q E+E+ V +G+ WK+ ++ KL+E K N F+S FY
Sbjct: 281 MCNLVGRQRQEILELRREMEELSVGH--DGILIWKLNDYSRKLQEAKIRSNHEFFSPPFY 338
Query: 341 SSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF- 396
+ +GY+ + + +LS++I ++ GE D++L+WPF ++ F+ L+ S
Sbjct: 339 THRYGYKLQVSAFLNGNGSGEGSHLSVYIRVLPGEYDNLLEWPFSYKVTFSLLDQSDPSL 398
Query: 397 ----SITDEIQSDKNFDSFKRPV----NFFLNKKAFGFNNFIRVADV 435
IT+ D N+ +F++P + + FG+ FI ++
Sbjct: 399 SKPQHITETFNPDPNWKNFQKPSSTRNSLDESTLGFGYPKFISHEEI 445
>gi|308368778|gb|ADO30306.1| TNF receptor-associated factor 6 [Smaug mossambicus]
Length = 203
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ EE V + CNG++ WK+ NF LK +E
Sbjct: 60 LTAKMETQNTHMGDLKRIVRNLEEKLAEVEAQQCNGIFIWKIENFSMYLKAQEEEKPVVI 119
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR + L
Sbjct: 120 HSTGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHMMQGEYDSHLPWPFQGTIRLSIL 179
Query: 391 NTS 393
+ S
Sbjct: 180 DQS 182
>gi|402899129|ref|XP_003912556.1| PREDICTED: TNF receptor-associated factor 4 [Papio anubis]
gi|380787345|gb|AFE65548.1| TNF receptor-associated factor 4 [Macaca mulatta]
gi|383413373|gb|AFH29900.1| TNF receptor-associated factor 4 [Macaca mulatta]
gi|384940764|gb|AFI33987.1| TNF receptor-associated factor 4 [Macaca mulatta]
Length = 470
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 186/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + C + + H+NTC +P
Sbjct: 74 VQVLGLPIRCIHSEEGCRWNGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|308368732|gb|ADO30283.1| TNF receptor-associated factor 6 [Sphenodon punctatus]
Length = 211
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSAC 338
M Q V + + +++ EE + + CNG+Y WK+ NF LK + +E + +S
Sbjct: 73 METQSTHVGDLKCTIRRLEEKVTEMEAQQCNGIYIWKIENFSVHLKNQEEERSVVIHSPG 132
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ ++SLF+H + GE D L WPF G IR + L+ S
Sbjct: 133 FYTGKPGYKLCLRLHIQPPNAQRCPNFISLFVHTMLGEYDSHLPWPFQGTIRLSILDQS 191
>gi|341931935|gb|AEL04276.1| TNF receptor-associated factor 6, partial [Plestiodon fasciatus]
Length = 208
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ EE + + CNG++ WK+ NF LK +E
Sbjct: 65 LTAKMETQITHIGDLKRTIRNLEEKITEIEAQQCNGIFIWKIENFSIYLKAQEEERPVVI 124
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 125 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 184
Query: 391 NTS 393
+ S
Sbjct: 185 DQS 187
>gi|431890972|gb|ELK01851.1| TNF receptor-associated factor 4 [Pteropus alecto]
Length = 470
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 190/483 (39%), Gaps = 87/483 (18%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC +P
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R L+ P HL C+F GC F +A E H + + S +
Sbjct: 113 CPNRCPTKLSRRDLPVHLQ-HDCPKRRLKCEF--CGCD--FSGEAF-ESHEGMCPQESVY 166
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN------KEHE---SKLWDPNK 241
E NK C H + + + AY K + H+ +L P
Sbjct: 167 CE---NK-CGARMMRRLLTQHATSECPKRTQPCAYCTKEFVFDTIQSHQYQCPRLPVPCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------M 280
NQ G + D C K G K+ R V E+S M
Sbjct: 223 NQCGVGTVAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKMAMARHV--EESVKPHLAM 280
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACF 339
+ + EL + E+E+ V +G+ WK+ ++ +L+E K + N +S F
Sbjct: 281 MCALVSRQRQELQ-ELRRELEELSVGS--DGMLIWKIGSYGRRLQEAKAKPNLECFSPAF 337
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 338 YTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPG 397
Query: 397 -----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D
Sbjct: 398 LAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDA 455
Query: 448 TFV 450
F+
Sbjct: 456 VFI 458
>gi|395849128|ref|XP_003797187.1| PREDICTED: TNF receptor-associated factor 4 [Otolemur garnettii]
Length = 470
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 186/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+N C +P
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSAPLRHLQGHLNACSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPTKLSRRDLPVHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|170716506|gb|ACB31955.1| TNF receptor-associated factor 6 [Natrix natrix]
Length = 211
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE +V + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQHSQMGDLKRTIRTLEEKIADVEAQQCNGIFLWKIENFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|47227801|emb|CAG08964.1| unnamed protein product [Tetraodon nigroviridis]
Length = 471
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 190/482 (39%), Gaps = 85/482 (17%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 16 RFQCPLCSKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 74
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++IL + C + + C + + + H +TC IP
Sbjct: 75 QQILALAIRCIHSEEGCRWTGQMKQLQGHFSTCAFNV---------------------IP 113
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R S LT P+HL C+F C F +A E H + + S +
Sbjct: 114 CPNRCSVKLTRRDLPDHLQ-HDCPKRKVKCEF----CGSEFTGEAY-ENHQGVCPQESVY 167
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMK---------NKEHESKLWDPNK 241
E NK C HG + + + Y K ++ H +
Sbjct: 168 CE---NK-CGARMMRRLLSQHGMAECPKRTQPCKYCGKEFVFDTIQNHQYHCPRFPVQCP 223
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
NQ G + D C K G KL R LE +
Sbjct: 224 NQCGTPNIAREDLANHVKDNCGSALVLCPFKDAGCKHRCPKLAIGRH--LEDTTKSHLTM 281
Query: 287 VNNFELNLKQ-----TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFY 340
+ N +Q E+E+ V +G+ WK+ ++ KL+E K N F+S FY
Sbjct: 282 MCNLVGRQRQEILELRREMEELSVSH--DGILIWKLNDYSRKLQEAKIRSNHEFFSPPFY 339
Query: 341 SSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF- 396
+ +GY+ + + +LS++I ++ GE D++L+WPF ++ F+ L+ S
Sbjct: 340 THRYGYKLQVSAFLNGNGSGEGSHLSVYIRVLPGEYDNLLEWPFSYKVTFSLLDQSDPSL 399
Query: 397 ----SITDEIQSDKNFDSFKRP--VNFFLNKK--AFGFNNFIRVADVLDPGRGFLMEDDT 448
IT+ D N+ +F++P L++ FG+ FI ++ R ++ ++
Sbjct: 400 SKPQHITETFNPDPNWKNFQKPNSTRNSLDESTLGFGYPKFISHEEIKK--RNYIRDNCI 457
Query: 449 FV 450
F+
Sbjct: 458 FI 459
>gi|392936095|gb|AFM93112.1| TNF receptor-associated factor 6, partial [Trachylepis
quinquetaeniata]
Length = 211
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ E+ + + CNG++ WK+ NF LK +E
Sbjct: 68 LTAKMETQITHIGDLKRTIRNLEDKIAEMEAQQCNGIFIWKIENFSVYLKAQEEERPVVI 127
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 128 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 187
Query: 391 NTSSEFSITD 400
+ S F D
Sbjct: 188 DQSEGFPRHD 197
>gi|308368740|gb|ADO30287.1| TNF receptor-associated factor 6 [Oplurus cyclurus]
Length = 213
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK + +E + +S
Sbjct: 74 METQNSQMGDLKRTIRNLEEKIIEMEAQQCNGIFIWKIEHFSVYLKAQXEERSVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D+ L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQSPNAQRCANYISLFVHIMQGEYDNHLPWPFQGTIRLSILDQS 192
>gi|170716512|gb|ACB31958.1| TNF receptor-associated factor 6 [Sonora semiannulata]
Length = 200
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 61 METQQSQMGDLKRTIRTLEEKMADIEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 120
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WP G +R + L+ S
Sbjct: 121 FYTGKPGYKLCLRLHIQSPSAQRCANYISLFVHTMQGDYDSHLPWPLQGTMRLSILDQS 179
>gi|341931905|gb|AEL04261.1| TNF receptor-associated factor 6, partial [Acanthosaura
lepidogaster]
Length = 201
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q K+ + + ++ E + CNG++ WK+ NF L+ +E +
Sbjct: 58 LNAKMETQNSKMGDLKRTIRNLEGKIAEIEAHQCNGIFIWKIENFSIYLRAQEEERQVVI 117
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR + L
Sbjct: 118 HSPGFYTGKPGYKLCMRLHIPVPNAQRSSNYISLFVHIMQGEYDSHLPWPFQGTIRLSVL 177
Query: 391 NTS 393
+ S
Sbjct: 178 DQS 180
>gi|392936133|gb|AFM93131.1| TNF receptor-associated factor 6, partial [Sphenomorphus solomonis]
Length = 209
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q +++ + ++ E+ + + CNG++ WK+ NF LK +E F
Sbjct: 66 LTAKMETQVTHISDLKRTIRTLEDKIAEMEGQQCNGIFIWKIENFSLYLKAQEEERPVVF 125
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 126 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 185
Query: 391 NTS 393
+ S
Sbjct: 186 DQS 188
>gi|341931915|gb|AEL04266.1| TNF receptor-associated factor 6, partial [Chalarodon
madagascariensis]
Length = 213
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK + +E + +S
Sbjct: 74 METQNSQMGDLKRTVRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERSVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D+ L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQSPNAQRCANYISLFVHIMQGEYDNHLPWPFQGTIRLSILDQS 192
>gi|170716486|gb|ACB31945.1| TNF receptor-associated factor 6 [Lachesis muta]
Length = 211
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + C+G++ WK+ NF A LK +E +S
Sbjct: 72 METQQNQMGDLKRTIRTLEEKIADIEAQQCSGIFLWKIENFSAYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|341931923|gb|AEL04270.1| TNF receptor-associated factor 6, partial [Cordylosaurus
subtesselatus]
Length = 198
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE V + CNG++ WK+ NF LK +E +S
Sbjct: 67 METQNTQMADLKRIIRNLEEKMAEVEAQQCNGIFIWKIENFSVYLKAQEEEKPVVIHSPG 126
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+FC R+++ ++Q Y+SLF+H++QG+ D L WPF G IR + L+ S
Sbjct: 127 FYTGKPGYKFCLRLHLQLPNSQRCANYISLFVHIMQGDYDSYLPWPFQGTIRLSILDQS 185
>gi|291242393|ref|XP_002741093.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 530
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYF 334
LE+KIK + + LK E N++++ +G+ WK+ +F + +E +
Sbjct: 344 LERKIKSQDRIIALKDVALAEQNLMIQTLELASYDGIMVWKIADFNRRCQEAVSGKTTSV 403
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS CF++ GY+ C RV ++ + ++SLF +++G ND IL WPF ++ F L+
Sbjct: 404 YSQCFFTGRHGYKMCARVYLNGDGMGKGNHVSLFFVIMRGPNDAILRWPFRQKVTFMWLD 463
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
++ + D + D +SF+RP N A G F+ ++ + P ++ +D F+
Sbjct: 464 QNNRDHVVDAFRPDPTSNSFQRPKNDM--NIASGCPLFMPLSQLHSPRHAYVKDDVAFL 520
>gi|170716518|gb|ACB31961.1| TNF receptor-associated factor 6 [Trimorphodon biscutatus]
Length = 203
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 64 METQHSQMGDLKRTIRTLEEKMADIEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 123
Query: 339 FYSSCFGYRFCTRVNI----SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I S+ A Y+SLF+H +QG+ D L WPF G +R + L+ S
Sbjct: 124 FYTGKPGYKLCLRLHIQLPSSQRCANYISLFVHTMQGDYDSHLPWPFQGTMRLSILDQS 182
>gi|170716458|gb|ACB31931.1| TNF receptor-associated factor 6 [Bothrops asper]
Length = 211
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + C+G++ WK+ NF A LK +E +S
Sbjct: 72 METQQNQMGDLKRTIRTLEEKIADIEAQQCSGIFLWKIENFSAYLKTQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|170716444|gb|ACB31924.1| TNF receptor-associated factor 6 [Agkistrodon contortrix]
Length = 202
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + C+G++ WK+ NF A LK +E +S
Sbjct: 72 METQQNQMGDLKRTIRTLEEKIADIEAQQCSGIFLWKIENFSAYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|170716490|gb|ACB31947.1| TNF receptor-associated factor 6 [Lamprophis fuliginosus]
Length = 211
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + CNG++ WK+ NF A +K +E +S
Sbjct: 72 METQQCQMGDLKRTIRTLEEKIADIEAQQCNGIFLWKIENFSAYMKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSVQRCGNYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|449478439|ref|XP_002187788.2| PREDICTED: TNF receptor-associated factor 1 [Taeniopygia guttata]
Length = 531
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G++ WK+ KL++ + YS FY++ +GY+ C RV ++ + ++SLF
Sbjct: 382 DGIFLWKITEVARKLQDSVTGRTVSLYSPAFYTAKYGYKVCLRVYLNGDGTGKGTHMSLF 441
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+++G+ D +L WPF ++ F L+ ++ I D + D SF+RPVN A G
Sbjct: 442 FVVMKGDYDALLPWPFRHKVTFMLLDQNNREHIIDAFRPDLTSASFQRPVNDM--NVASG 499
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFV 450
F+ +A + P G++ ED F+
Sbjct: 500 CPMFLPLAKLQSPKHGYVREDTLFL 524
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPI----------DEKVLTK 64
+F CS C LK A+ T CGH++C+AC+ +WI KN C +E +L +
Sbjct: 38 KFLCSNCNNILKKALQTLCGHRYCSACL-AWILRNNKNAICQKCKEEDPNTLGEESLLAE 96
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+ F D +EI E + C CS + ++E H + C
Sbjct: 97 ERAFGDAAINKEISELRVHCVTLGCSWSGIMKDFEEHQSLC 137
>gi|392936097|gb|AFM93113.1| TNF receptor-associated factor 6, partial [Diplometopon zarudnyi]
Length = 207
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q +V + + ++ EE + + CNG++ WK+ NF LK +E
Sbjct: 64 LTAKMETQNSQVGDLKRTIRNLEEKIAEMEAQQCNGIFLWKIENFSIYLKAQEEERPVVI 123
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ +AQ Y+SLF+H++QG+ D L WPF G IR + L
Sbjct: 124 HSPGFYTGRPGYKLCLRLHLQLPNAQRCPNYISLFVHIMQGDYDSHLPWPFQGTIRLSIL 183
Query: 391 NTS 393
+ S
Sbjct: 184 DQS 186
>gi|170716514|gb|ACB31959.1| TNF receptor-associated factor 6 [Thamnophis marcianus]
Length = 211
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + + + ++ EE +V + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQHSQXGDLKRTIRTLEEKLADVEAQQCNGIFLWKIENFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|1041446|emb|CAA63103.1| Cysteine rich motif Associated to Ring and Traf domains protein
(mCART1) [Mus musculus]
Length = 470
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 190/483 (39%), Gaps = 87/483 (18%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + ++D++ +++CGH++C C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMRDSVEVSTCGHRYCDNCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC +P
Sbjct: 74 VQVLGLAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLE 192
R L+ P HL C+F GC F +A E H + E
Sbjct: 113 CPNRCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCD--FSGEAY-ESHEGVCPQ---E 163
Query: 193 LLF--NKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN------KEHE---SKLWDPNK 241
+F NK C H + + + AY K + H+ +L P
Sbjct: 164 SVFCENK-CGARMMRRLLAQHATSECPKRTQPCAYCTKEFVYDTIQSHQYQCPRLPVPCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------M 280
NQ G + D C K G KL R V E+S M
Sbjct: 223 NQCGVGTVAREDLPTHLKDSCRTAFVLCPFKESGCKHRCPKLAMGRHV--EESVKPHLAM 280
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACF 339
+ + EL + E+E+ + +GV WK+ ++ +L+E K + N +S F
Sbjct: 281 MCALVSRQRQELQ-ELRRELEELSIGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAF 337
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ ++ + +LS++I ++ G D++L+WP R+ F+ L+ S
Sbjct: 338 YTHKYGYKLQVSASLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPLARRVTFSLLDQSDPG 397
Query: 397 -----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D
Sbjct: 398 LAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDA 455
Query: 448 TFV 450
F+
Sbjct: 456 VFI 458
>gi|392936099|gb|AFM93114.1| TNF receptor-associated factor 6, partial [Tiliqua scincoides]
Length = 213
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ E+ + + CNG++ WK+ NF LK +E
Sbjct: 70 LTAKMETQITHIGDLKRTIRTLEDKIAEIEAQQCNGIFIWKIENFSVYLKAQEEERPVVI 129
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 130 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 189
Query: 391 NTS 393
+ S
Sbjct: 190 DQS 192
>gi|392936115|gb|AFM93122.1| TNF receptor-associated factor 6, partial [Teratoscincus scincus]
Length = 207
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 68 METQNTHMGNLKRTIRNLEEKITEMEAQQCNGIFIWKIENFSVYLKAQEEERPVVIHSPG 127
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H +QG +D L WPF G IR + L+ S
Sbjct: 128 FYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGVHDSHLPWPFQGTIRLSILDQS 186
>gi|308368792|gb|ADO30313.1| TNF receptor-associated factor 6 [Amphisbaena fuliginosa]
Length = 211
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q V + + ++ EE V CNG++ WK+ NF LK +E
Sbjct: 68 LTAKMETQNSLVGDLKRTIRNLEEKMAEVEAHQCNGIFLWKIENFSIHLKAQEEERPVVI 127
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H++QG+ D L WPF G IR + L
Sbjct: 128 HSPGFYTGRPGYKLCLRLHLQLPSAQRCHNYISLFVHIMQGDYDSHLPWPFQGTIRLSIL 187
Query: 391 NTS 393
+ S
Sbjct: 188 DQS 190
>gi|392936113|gb|AFM93121.1| TNF receptor-associated factor 6, partial [Dromaius
novaehollandiae]
Length = 213
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 14/136 (10%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M E K + N E + + E + CNG+Y WK+ NF +
Sbjct: 65 HQIRELIAKMETQNTHMAELKRTIRNLEGKITEMEA-------QQCNGIYIWKIENF-SG 116
Query: 324 LKEMKEINR--YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDIL 377
L++ +E R +S FY+ GY+ C R++I +AQ ++SLF+H +QGE D L
Sbjct: 117 LQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVHTMQGEYDSHL 176
Query: 378 DWPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 177 PWPFQGTIRLSILDQS 192
>gi|148226504|ref|NP_001087501.1| TNF receptor-associated factor 4 [Xenopus laevis]
gi|51258319|gb|AAH80018.1| MGC82199 protein [Xenopus laevis]
Length = 470
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 194/487 (39%), Gaps = 89/487 (18%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L +F C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 12 LRRKFLCPLCGKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDR 70
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
+++ + C + + C + + ++H+N C
Sbjct: 71 DLETQVMSLTIRCIHSEEGCRWSGQLKQLQAHLNICAFNV-------------------- 110
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KT 187
IP R S L PEH+ C+F C F +A E+H +
Sbjct: 111 -IPCPNRCSTKLIRRDLPEHMQ-HDCPKRKVRCEF----CGTDFTGEAY-EEHQGCCPQE 163
Query: 188 SFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN------KEHE---SKLWD 238
S + E NK C H + + + Y K + H+ +
Sbjct: 164 SVYCE---NK-CGARMMRRVLSQHSLVECPKRTQPCPYCNKEFVFDTIQSHQYQCPRFPT 219
Query: 239 PNKNQAG------DDKSSE--------------GDCSCKTCGDNSHLLKLVYE--RMVLL 276
P NQ G +D SS D CK G + + + E R+ L
Sbjct: 220 PCPNQCGVSSIAREDLSSHIKESCNSALVLCPFKDSGCKHRGPKITMSRHLEETMRVHLS 279
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FY 335
S L + + EL KQ EE+ + GV WK+ ++ K++E K Y +
Sbjct: 280 MMSSLVSRQRQEILELR-KQVEELSVSS-----EGVLIWKISDYSRKVQEAKVRGNYESF 333
Query: 336 SACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT 392
S FY+ +GY+ + + YLS++I ++ GE D++L+WPF R+ F+ L+
Sbjct: 334 SPPFYTHKYGYKLQVSAFLNGNGSGEGSYLSVYIRVLPGEYDNLLEWPFSYRVTFSLLDQ 393
Query: 393 SSEF-----SITDEIQSDKNFDSFKRPV----NFFLNKKAFGFNNFIRVADVLDPGRGFL 443
S +IT+ D N+ +F++P + + FG+ FI D+ R ++
Sbjct: 394 SDPSLSKPQNITETFNPDPNWKNFQKPGGSRNSLDESTLGFGYPKFISNEDIRK--RNYV 451
Query: 444 MEDDTFV 450
++ F+
Sbjct: 452 RDNAIFL 458
>gi|308368798|gb|ADO30316.1| TNF receptor-associated factor 6 [Trogonophis wiegmanni]
Length = 205
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q +V + + ++ EE + + CNG++ WK+ NF LK +E
Sbjct: 62 LTAKMETQNSQVGDLKRTIRNLEEKIAEMEAQQCNGIFLWKIENFSIYLKAQEEERPVVI 121
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ +AQ Y+SLF+H++QG+ D L WPF G IR + L
Sbjct: 122 HSPGFYTGRPGYKLCLRLHLQLPNAQRCPNYISLFVHIMQGDYDSHLPWPFQGTIRLSIL 181
Query: 391 NTS 393
+ S
Sbjct: 182 DQS 184
>gi|341931931|gb|AEL04274.1| TNF receptor-associated factor 6, partial [Dipsosaurus dorsalis]
Length = 212
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + +K EE + + CNG++ WK+ +F LK +E+ +S
Sbjct: 73 METQNSQMGDLKRTIKNLEEKITELEAQQCNGIFLWKIEHFSVYLKAQEELKPVVIHSPG 132
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A+ Y+SLFIH+++GE D L WPF G IR + L+ S
Sbjct: 133 FYTGRPGYKLCMRLHIQLPNAERCANYISLFIHVMKGEYDSHLSWPFQGTIRLSILDQS 191
>gi|170716526|gb|ACB31965.1| TNF receptor-associated factor 6 [Xenodermus javanicus]
Length = 201
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 62 METQNSQMGDLKRTIRNLEEKIVDIEAQQCNGIFLWKIENFNAYLKAQEEERPVVIHSPG 121
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 122 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 180
>gi|291190894|ref|NP_001167069.1| TNF receptor-associated factor 4 [Salmo salar]
gi|223647944|gb|ACN10730.1| TNF receptor-associated factor 4 [Salmo salar]
Length = 470
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/490 (19%), Positives = 189/490 (38%), Gaps = 101/490 (20%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C +C + ++D + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RFQCPLCSKAMRDPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++IL + C + + C + + + H +TC IP
Sbjct: 74 QQILALPIRCIHSEEGCRWTGQMKQLQGHFSTCAFNV---------------------IP 112
Query: 133 TNKRNSKILTVTVFPEHLN----------------MQGSSNENFP--CKFYQVGC----- 169
R S LT P+HL G + EN C V C
Sbjct: 113 CPNRCSIKLTRRDLPDHLQHDCPKRKVKCEFCGSEFTGEAYENHQGICPQESVYCENKCG 172
Query: 170 ----REVFKSQALLE------------KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR 213
R + +L E K + T + + ++ TP+ R
Sbjct: 173 ARMMRRLLSQHSLAECPKRTQPCKYCGKEFVFDTIQNHQYHCPRFPVACPNQCGTPNIAR 232
Query: 214 QDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERM 273
+D +N +K + + P K+ + C HL +
Sbjct: 233 EDLANH-------VKENCGSALILCPFKDAGCKHR-------CPKLAIGRHLEDTTKSHL 278
Query: 274 VLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY 333
++ + Q+ ++ +++ D V++ WK+ ++ KL+E K N +
Sbjct: 279 TMMCSLVGRQRQEILELRREMEELSVSNDGVLI--------WKLSDYSRKLQEAKLRNNH 330
Query: 334 -FYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTA 389
F+S FY+ +GY+ + + +LS++I ++ GE D++L+WPF ++ F+
Sbjct: 331 EFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSIYIRVLPGEYDNLLEWPFSYKVTFSI 390
Query: 390 LNTSSEF-----SITDEIQSDKNFDSFKRPV----NFFLNKKAFGFNNFIRVADVLDPGR 440
++ S IT+ D N+ +F++P + + FG+ FI ++ R
Sbjct: 391 MDQSDPSLSKPQHITETFNPDPNWKNFQKPCSTRNSLDESTLGFGYPKFISHEEIKK--R 448
Query: 441 GFLMEDDTFV 450
++ ++ F+
Sbjct: 449 NYVRDNSLFL 458
>gi|170716500|gb|ACB31952.1| TNF receptor-associated factor 6 [Lycophidion capense]
Length = 211
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ CNG++ WK+ NF A +K +E +S
Sbjct: 72 METQHCQMGDLKRTIRTLEEKIADIEAHQCNGIFLWKIENFSAYMKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H++QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSVQRCGNYISLFVHIMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|170716498|gb|ACB31951.1| TNF receptor-associated factor 6 [Loxocemus bicolor]
Length = 211
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITDIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|308368770|gb|ADO30302.1| TNF receptor-associated factor 6 [Strophurus ciliaris]
Length = 208
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q V N + ++ EE + + CNG++ WK+ +F LK +E
Sbjct: 65 LTAKMETQNTHVGNLKRTIRNLEERITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVI 124
Query: 335 YSACFYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I + A Y+SLF+H ++GE+D+ L WPF G IR + L
Sbjct: 125 HSPGFYTGKPGYKLCLRLHIQLPNTPRCANYISLFVHTMKGEHDNHLPWPFQGTIRLSIL 184
Query: 391 NTS 393
+ S
Sbjct: 185 DQS 187
>gi|308368734|gb|ADO30284.1| TNF receptor-associated factor 6 [Chamaeleo calyptratus]
Length = 213
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E+ + + E + CNG++ WK+ NF
Sbjct: 65 HQIRELIAKMETQSSQMGDLKSTIRNLEVKIAEMEAHQ-------CNGIFIWKIENFSIY 117
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I AQ Y+SLF+H++QG+ D L
Sbjct: 118 LKAQEEERPVVIHSPGFYTGRPGYKLCMRLHIQLPTAQRCANYISLFVHIMQGDYDSHLP 177
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 178 WPFQGTIRLSILDQS 192
>gi|392936123|gb|AFM93126.1| TNF receptor-associated factor 6, partial [Amphiglossus splendidus]
Length = 213
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ EE + CNG++ WK+ NF LK +E
Sbjct: 70 LTAKMETQITHIGDLKRTIRNLEEKIAETEAQQCNGIFIWKIENFSIYLKAQEEERPVVI 129
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 130 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 189
Query: 391 NTS 393
+ S
Sbjct: 190 DQS 192
>gi|170716450|gb|ACB31927.1| TNF receptor-associated factor 6 [Aspidites melanocephalus]
Length = 211
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITDIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|291242397|ref|XP_002741095.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 500
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 202/503 (40%), Gaps = 88/503 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP------IDEKVLTKDD 66
++ ++ C C E L + + T CGH++C C + + +G C I + +L +
Sbjct: 14 IEDKYICRYCDEILHNPLQTHCGHRYCRQCFEELLRNEGDVLCSSCREEGIMDSLLNIEQ 73
Query: 67 IFIDNYTRREI----------------------LENNLTCPYKQ--------CSSQLSIP 96
+ D RE+ L++N TC Y+ C+ +
Sbjct: 74 AYPDRAIARELNKHNVQCINIGCDWTGSFKDYKLDHNPTCEYEMIKCVNRNGCNVSIQRG 133
Query: 97 EYESHVNT-C---YLKYSQPSVEDITDSPTSSFRNTSGIPTNKRNSKILTV-TVFPEHLN 151
SH+ C +K E R + + + K TV +H
Sbjct: 134 NLSSHLEKDCPMRIVKCEHCQHETAFIDMEIHLRECADVTKETNSCKEKTVRKTMTDHTE 193
Query: 152 MQGS--SNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTP 209
+ S S + C F ++GC ++ K L+ SD + +
Sbjct: 194 PESSICSKDLVFCDFKEIGCEDMEKKILCLQ-------------------SDEKRIADRL 234
Query: 210 SHGRQDTSNQKE---IEAYLMKNKEHESKLWDPNKNQAGDDK---SSEG-----DCSCKT 258
S R T N++E +A + ++H+ + N A +K + EG + T
Sbjct: 235 S--RLSTRNERENSEDDALVRTVEKHDKSIVGLNNCIAVTNKKINTCEGMIVVLNNEVGT 292
Query: 259 CGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVY 313
DN LL ++ + ++ LE+K+K + + LK E ++ ++ +GV
Sbjct: 293 MTDNVTLLSRQQKKYTEMIEA-LEKKVKAQDRIIALKDVAIAEQDLRIQSLEMASYDGVL 351
Query: 314 FWKMYNF-PAKLKEMKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLV 369
WK+ +F P + + YS CFYSS GY+ C R+ I+ + ++SLF ++
Sbjct: 352 VWKITDFAPKRQDAISGRTTSIYSPCFYSSRHGYKMCARIYINGDGMGKGNHVSLFFVIM 411
Query: 370 QGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNF 429
+GE+D +L WPF ++ L+ ++ + D + D SF+RP + A G F
Sbjct: 412 KGESDALLRWPFRQKVTMMWLDQINKDHVIDAFRPDPTSSSFQRPKHDM--NIASGCPLF 469
Query: 430 IRVADVLDPGRGFLMEDDTFVIK 452
+ ++ L+ R + DDT IK
Sbjct: 470 MPLSQ-LESLRHHYVRDDTAFIK 491
>gi|341931989|gb|AEL04303.1| TNF receptor-associated factor 6, partial [Plica plica]
Length = 203
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + +K EE + + CNG++ WK+ +F LK +E +S
Sbjct: 64 METQNSQMGDLKRTIKNLEEKICEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 123
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H++QGE D+ L WPF G IR + L+ S
Sbjct: 124 FYTGKPGYKLCMRLHIQLPSAQRCANYISLFVHIMQGEYDNYLSWPFQGTIRLSILDQS 182
>gi|170716442|gb|ACB31923.1| TNF receptor-associated factor 6 [Afronatrix anoscopus]
Length = 211
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQHSQMGDLKRTIQTLEEKIADIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|308368764|gb|ADO30299.1| TNF receptor-associated factor 6 [Anelytropsis papillosus]
Length = 211
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQSTQMGDLKRTIRNLEEKLTEMEAQQCNGIFLWKIENFSIYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++ GE D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQSPNAQRCANYISLFVHIMLGEYDSHLPWPFQGTIRLSILDQS 190
>gi|341931949|gb|AEL04283.1| TNF receptor-associated factor 6, partial [Liolaemus bellii]
Length = 212
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V N + +K E+ + + CNG++ WK+ F LK +E +S
Sbjct: 75 METQNSQVGNLKRTIKNLEDKIAEMEAQQCNGIFIWKIERFSVYLKTQEEEGPVVIHSPG 134
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 135 FYTGRPGYKVCMRLHIQPPNVPRCANYISLFVHIMQGEYDSHLSWPFQGTIRLSILDQS 193
>gi|399931694|gb|AFP57403.1| TNF receptor-associated factor 6, partial [Liolaemus elongatus]
Length = 214
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V N + +K E+ + + CNG++ WK+ F LK +E +S
Sbjct: 75 METQNSQVGNLKRTIKNLEDKIAEMEAQQCNGIFIWKIERFSVYLKTQEEEGPVVIHSPG 134
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 135 FYTGRPGYKVCMRLHIQPPNVPRCANYISLFVHIMQGEYDSHLSWPFQGTIRLSILDQS 193
>gi|170716446|gb|ACB31925.1| TNF receptor-associated factor 6 [Anilius scytale]
Length = 211
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKIADIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|170716468|gb|ACB31936.1| TNF receptor-associated factor 6 [Cylindrophis ruffus]
Length = 211
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKIADIEAQQCNGIFLWKIENFGMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|399931688|gb|AFP57400.1| TNF receptor-associated factor 6, partial [Amphiesma stolatum]
Length = 213
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF L+ +E +S
Sbjct: 74 METQHSQMGDLKRTIRTLEEKIADIEAQQCNGIFLWKIENFSVYLRAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 192
>gi|170716528|gb|ACB31966.1| TNF receptor-associated factor 6 [Xenopeltis unicolor]
Length = 187
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 67 METQNSHIGDLKRTIRNLEEKIADIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 126
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 127 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 185
>gi|170716524|gb|ACB31964.1| TNF receptor-associated factor 6 [Xenochrophis piscator]
Length = 211
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF L+ +E +S
Sbjct: 72 METQHSQMGDLKRTIRTLEEKIADIEAQQCNGIFLWKIENFSVYLRAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCXNYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|170716448|gb|ACB31926.1| TNF receptor-associated factor 6 [Aparallactus werneri]
Length = 211
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ + + + ++ EE ++ + CNG++ WK+ NF A LK +E +S
Sbjct: 72 METQQSQNGDLKRTIRTLEEKIADIEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPGVQRCGNYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|238538003|pdb|3HCT|A Chain A, Crystal Structure Of Traf6 In Complex With Ubc13 In The P1
Space Group
gi|238538005|pdb|3HCU|A Chain A, Crystal Structure Of Traf6 In Complex With Ubc13 In The C2
Space Group
gi|238538007|pdb|3HCU|C Chain C, Crystal Structure Of Traf6 In Complex With Ubc13 In The C2
Space Group
Length = 118
Score = 79.7 bits (195), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 15 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 73
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP + C ++ + E H C
Sbjct: 74 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHC 106
>gi|308368746|gb|ADO30290.1| TNF receptor-associated factor 6 [Celestus enneagrammus]
Length = 205
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 66 METQNSQMGDLKRTIRNLEEKVTEIQAQQCNGIFIWKIGNFSTYLKAQEEERPVVIHSPG 125
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ +
Sbjct: 126 FYTGRPGYKLCMRLHIQSPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQT 184
>gi|170716440|gb|ACB31922.1| TNF receptor-associated factor 6 [Acrochordus granulatus]
Length = 211
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSAC 338
M Q + + + ++ EE ++ + CNG++ WK+ NF LK + +E +S
Sbjct: 72 METQNSHMGDLKRTIRNLEEKIADIEAQQCNGIFLWKIENFSLYLKAQEEETPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSS 394
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHAMQGDYDSHLPWPFQGTIRLSILDQSE 191
Query: 395 EF 396
+
Sbjct: 192 GY 193
>gi|392936087|gb|AFM93108.1| TNF receptor-associated factor 6, partial [Eugongylus rufescens]
Length = 174
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q ++N + ++ E+ + + CNG++ WK+ NF LK +E
Sbjct: 31 LTAKMETQGTHISNLKRTIRTLEDKIAEIEAQQCNGIFIWKIENFNLYLKAQEEERPVVI 90
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H + GE+D L WPF G IR + L
Sbjct: 91 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMLGEHDSHLPWPFQGTIRLSIL 150
Query: 391 NTS 393
+ S
Sbjct: 151 DQS 153
>gi|291224318|ref|XP_002732154.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 554
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/536 (19%), Positives = 202/536 (37%), Gaps = 98/536 (18%)
Query: 10 KLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-----DEKVLTK 64
+ ++ +++C+ C + L+ I T CGH+FC C D + C VL+
Sbjct: 12 RTTIEDKYKCNYCRQILRQPIQTYCGHRFCKKCFDLILSRHTPPICNACKEEGSHSVLST 71
Query: 65 DDIFIDNYTRREILENNLTC----------------------PYK-------QCSSQLSI 95
++ + D +RE+ + + C P + C +Q+
Sbjct: 72 EECYQDKAIQRELSKYEVRCQNEGCNWTGIFKDYDETHVDECPAQVIHCIKYGCEAQVRR 131
Query: 96 PEYESHVNT-CYLKYSQPSVEDIT---DSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLN 151
H+ T C ++ Q D+ + +P+ N + L+
Sbjct: 132 DALAHHLRTECDMRVIQCDYCDVQLPYKEIKMHTKECDKVPSECPNCHKQNIPRGELKLH 191
Query: 152 MQGS----SNENFPCKFYQVGCREVFKSQALLEKHYD-----LKTSFHLELLFNKYCSD- 201
+ + S + PC+F +VGC + L E H++ L+ FH + F D
Sbjct: 192 LDANNGDCSKKIVPCEFEKVGCERKMEIGKLKEHHHEYTVQHLQLLFHYLIPFLAMVQDV 251
Query: 202 ----GSQSTNTPSHGRQD------TSNQKEIEAYLMKN-KEHESKLWDPNKNQAGDDKSS 250
GS + + +Q T+ ++E + K E E PN
Sbjct: 252 NGKFGSVMSIKKTVEKQQQGIESLTTTVHDLETQVKKRLTESERTAEHPNGLLVTGLIQE 311
Query: 251 EGDCSCKTCGDNSHLLK---LVYERMV-LLEQSMLEQKIKVNNFELNLKQTEEIEDNVVL 306
+G + G+ + LL YE +V +L + + K+ E++LK+ E D +
Sbjct: 312 QGK-KIEDMGNKTKLLHSKVTTYEGIVGVLSNEVENEAEKLKEVEMSLKRERERSDALER 370
Query: 307 KL----------------------------CNGVYFWKMYNFPAK-LKEMKEINRYFYSA 337
K+ +GV WK+ + K + + YS
Sbjct: 371 KIKSQDRIIAMKDVALAEQDLRIQSLEMTSYDGVLVWKITDSAQKQCDAVSQRTLSIYSP 430
Query: 338 CFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSS 394
CF++S GY+ C R+ ++ + ++SLF +++G D +L WPF ++ ++ +
Sbjct: 431 CFFTSRHGYKMCARIYLNGDGMGKGNHVSLFFVIMRGTFDGLLRWPFRQKVTLMWIDQNH 490
Query: 395 EFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D + D +SFKRP A G F+ +A + P ++ +D ++
Sbjct: 491 REHVIDAFRPDPTSNSFKRPSQDM--NIASGCPLFMPLAQIHSPRHAYVKDDVAYI 544
>gi|170716510|gb|ACB31957.1| TNF receptor-associated factor 6 [Pareas hamptoni]
Length = 211
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ E+ + + CNG++ WK+ NF A LK +E +S
Sbjct: 72 METQQSQMGDLKRTIRTLEDKIADTEAQQCNGIFLWKIENFSAYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPXAQRCANYISLFVHTMQGNYDSHLPWPFQGTIRLSILDQS 190
>gi|341931953|gb|AEL04285.1| TNF receptor-associated factor 6, partial [Morunasaurus annularis]
Length = 198
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E + + E E CNG++ WK+ +F
Sbjct: 50 HQIRELIAKMETQNSHMGDLKRTIRNLEEKITEMEAQE-------CNGIFIWKIEHFSVY 102
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L
Sbjct: 103 LKTQEEERPVVIHSPGFYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHIMQGEYDSHLP 162
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 163 WPFQGTIRLSILDQS 177
>gi|381289257|gb|AFG21868.1| traf6, partial [Capra hircus]
Length = 270
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 8 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 66
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP + C ++ + E H C
Sbjct: 67 AKREILSLMVKCPNEGCLHKMELRHLEEHQAHC 99
>gi|308368738|gb|ADO30286.1| TNF receptor-associated factor 6 [Saara hardwickii]
Length = 211
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M++ K + N E + + E + CNG++ WK+ NF
Sbjct: 63 HQIRELIAKMETQNTQMVDLKRTIQNLEAKIAEVEA-------QQCNGIFLWKIENFSMY 115
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H++QG D L
Sbjct: 116 LRAQEEERPVVIHSPGFYTGRPGYKLCMRLHIQLPNAQRCANYISLFVHIMQGVYDSHLP 175
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 176 WPFQGTIRLSILDQS 190
>gi|170716508|gb|ACB31956.1| TNF receptor-associated factor 6 [Notechis scutatus]
Length = 211
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEE-IEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSA 337
M Q+ ++ + + ++ EE I DN + CNG++ WK+ NF A LK +E +S
Sbjct: 72 METQQSQMGDLKRTIRTLEEKIADNEAQQ-CNGIFLWKIENFSAFLKAQEEERPVVIHSP 130
Query: 338 CFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 131 GFYTGKPGYKLCLRLHIQLPSVQRCGNYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|170716456|gb|ACB31930.1| TNF receptor-associated factor 6 [Boa constrictor]
Length = 200
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 61 METQNSQMGDLKRTIRNLEEKIVDIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 120
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 121 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 179
>gi|308368736|gb|ADO30285.1| TNF receptor-associated factor 6 [Enyalioides laticeps]
Length = 213
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E + + E E CNG++ WK+ +F
Sbjct: 65 HQIRELIAKMETQNSHMGDLKRTIRNLEEKITEMEAQE-------CNGIFIWKIEHFSIY 117
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L
Sbjct: 118 LKAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHIMQGEYDSHLP 177
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 178 WPFQGTIRLSILDQS 192
>gi|170716478|gb|ACB31941.1| TNF receptor-associated factor 6 [Exiliboa placata]
Length = 211
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKIVDIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|196015569|ref|XP_002117641.1| hypothetical protein TRIADDRAFT_32844 [Trichoplax adhaerens]
gi|190579810|gb|EDV19899.1| hypothetical protein TRIADDRAFT_32844 [Trichoplax adhaerens]
Length = 180
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 306 LKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDAQ---Y 361
L L NG + W++ NF A L + + + YS F + GY+ C RVN+ D + Y
Sbjct: 25 LSLANGDFIWEVRNFNACLSDARCNLRDSMYSEAFSTGNPGYKLCVRVNLDGVDDRSRNY 84
Query: 362 LSLFIHLVQGENDDILDWPFVGRIRFTALN----TSSEFSITDEIQSDKNFDSFKRPVNF 417
LS+++HL+QGE D+ + WPF RI+ + L+ +ITD + N + +RP
Sbjct: 85 LSVYVHLMQGEYDNAMKWPFNRRIKISVLDRNPVRGERRNITDILSPQPNITALQRPKE- 143
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ + + +GF F+ ++ + + + D I+ +V
Sbjct: 144 WKSPQGYGFAKFVSISRL---SSRYYLAGDILAIRIRV 178
>gi|308368784|gb|ADO30309.1| TNF receptor-associated factor 6 [Scincus scincus]
Length = 209
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ EE + CNG++ WK+ NF LK +E
Sbjct: 66 LTAKMETQITHIGDLKRTIRNLEEKIAESEAQQCNGIFIWKIDNFSIYLKAQEEERPVVI 125
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H +QGE D L WPF G IR + L
Sbjct: 126 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSIL 185
Query: 391 NTS 393
+ S
Sbjct: 186 DQS 188
>gi|170716462|gb|ACB31933.1| TNF receptor-associated factor 6 [Casarea dussumieri]
Length = 200
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF +K +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKIADIEAQQCNGIFLWKIENFSMYMKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|170716502|gb|ACB31953.1| TNF receptor-associated factor 6 [Micrurus fulvius]
Length = 206
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 293 NLKQT-EEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCT 350
+LK+T + + + V + CNG+ WK+ NF A LK +E +S FY+ GY+ C
Sbjct: 79 DLKRTIQTLVEKVEAQQCNGILLWKIENFSAYLKAQEEERPVVIHSQGFYTGKPGYKLCL 138
Query: 351 RVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
R++I Q Y+SLF+H++QG+ D L WPF G IR + L+ S
Sbjct: 139 RLHIQSPSVQRCGNYISLFVHIMQGDYDSHLSWPFQGTIRLSILDQS 185
>gi|341931991|gb|AEL04304.1| TNF receptor-associated factor 6, partial [Uma scoparia]
Length = 212
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 73 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKTQEEERPVVIHSPG 132
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLFIH +QGE D L WPF G IRF+ L+ S
Sbjct: 133 FYTGKPGYKLCMRLHIQLPNAAKCANYISLFIHTMQGEYDSHLSWPFQGTIRFSILDQS 191
>gi|334311565|ref|XP_001369540.2| PREDICTED: TNF receptor-associated factor 1-like [Monodelphis
domestica]
Length = 590
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 260 GDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYN 319
G L+ + +R+V L+Q++ ++ + + E L EE +GVY WK+ N
Sbjct: 397 GLTQDLILSLEQRVVDLQQTLTQKDLALTKLEQTLHLLEEAS-------YDGVYLWKITN 449
Query: 320 FPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDD 375
F + E +S FY++ +GY+ C R+ ++ + +LSLFI +++G+ D
Sbjct: 450 FTRRCHESACGRTVSLFSPAFYTARYGYKLCLRIYLNGDGMGKGTHLSLFIVVMKGKYDA 509
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRP 414
+L+WPF ++ F L+ ++ +TD D SF++P
Sbjct: 510 LLEWPFRNKVTFMLLDQNNREHVTDSFHPDLTSGSFQKP 548
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-------------DEK 60
+P++ C C LK A T CGH++CAAC+ SWI KN PI DE
Sbjct: 36 EPKYLCCGCHNVLKKAQQTLCGHRYCAACL-SWILRISKN--PICSRCQEENPQTVGDES 92
Query: 61 VLTKDDIFIDNYTRREILENNLTCPYKQCS 90
L+++ FID +EI E ++ C C
Sbjct: 93 FLSEEKAFIDAAINKEISELSVHCVISGCG 122
>gi|341931909|gb|AEL04263.1| TNF receptor-associated factor 6, partial [Brachylophus fasciatus]
Length = 211
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + +K EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNFQMGDLKRTIKNLEEKITELEAEQCNGIFIWKIEHFSVYLKAQEEEKPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H+++GE D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCMRLHIQLPKAQRCANYISLFVHIMKGEYDSHLSWPFQGTIRLSILDQS 190
>gi|291242863|ref|XP_002741325.1| PREDICTED: TNF receptor-associated factor 1-like, partial
[Saccoglossus kowalevskii]
Length = 408
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYF 334
LE+KIK + + LK E ++ ++ +GV WK+ +F K + +
Sbjct: 217 LERKIKFQDRIIALKDVALAEQDLRIQSLELASYDGVLVWKITDFNRKRNDALSGRTTSI 276
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS CF++SC GY+ C RV ++ + ++SLF +++G D +L WPF ++ F ++
Sbjct: 277 YSPCFFTSCHGYKMCARVYLNGDGMGKGNHISLFFVIMRGSFDALLRWPFRQKVTFMIMD 336
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 451
+++ + D + D +SFKRP A G F+ ++ LD R ++DD I
Sbjct: 337 QNNQEHVIDAFRPDPTSNSFKRPTGDM--NIASGCPLFMPLSQ-LDSSRHAYVKDDCMFI 393
Query: 452 KTQV 455
K V
Sbjct: 394 KVIV 397
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 30/213 (14%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC------PIDEKVLTKDD 66
L P++ C++C + L+D + T+CGH++C +CID +I+ G C + ++T D
Sbjct: 11 LTPKYLCTLCKQVLRDPVQTTCGHRYCRSCIDDFINRPGTQRCFECAGEDDPDNIITADQ 70
Query: 67 IFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDIT----DSPT 122
IF DN T+REI + C C+ + S +YE + ++ + T D PT
Sbjct: 71 IFPDNATKREIQCLEVKCSLPSCTWKGSFKDYEERGHNGHVMVGSADQDGATQIDPDVPT 130
Query: 123 SS---------------FRNTSGIPT--NKRNSKILTVTVFPEHLNMQGSSNENFPCKFY 165
+S ++TSG+ T NK++ I + V LN + S E Y
Sbjct: 131 TSQKIKTETAQKVGREEVKSTSGMHTTINKQSRSIDELKVKTATLNTEVSKYERIVAGLY 190
Query: 166 QVGCREVFKSQAL---LEKHYDLKTSFHLELLF 195
+ R QA+ L++ DL S ++ F
Sbjct: 191 RQIERNANDVQAIERKLKQDRDLVESLERKIKF 223
>gi|308368758|gb|ADO30296.1| TNF receptor-associated factor 6 [Lanthanotus borneensis]
Length = 213
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M E K + N E Q EIE + CNG++ WK+ NF
Sbjct: 65 HQIRELIAKMETQNSQMGELKRTIRNLE---DQIAEIEA----QQCNGIFIWKITNFSIY 117
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ Y+SLF+H +QG D L
Sbjct: 118 LKAQEEEKPVVIHSPGFYTGRPGYKLCMRLHIQLPNAQRCANYISLFVHTMQGNYDSHLP 177
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ +
Sbjct: 178 WPFQGTIRLSILDQT 192
>gi|449667311|ref|XP_004206538.1| PREDICTED: TNF receptor-associated factor 6-like [Hydra
magnipapillata]
Length = 232
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 96/187 (51%), Gaps = 12/187 (6%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEM--KEINRY 333
L+ + E + ++ + + +K E+ + V + G + W++ NF ++ E+
Sbjct: 45 LKHTRSELESRIESISIEVKAQNEVINEVSARTWKGNFIWRISNFDQLFRQALSGEVP-A 103
Query: 334 FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+N++ D+ ++S+F+H++QGE D +++WPF G + FT L
Sbjct: 104 IHSLPFYTGVPGYKMCLRINLNGIDSGAGTHVSMFVHMMQGEFDSLIEWPFPGNVIFTIL 163
Query: 391 --NTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
+T + + + + +F RP N K +G+ IR + RG++ +DT
Sbjct: 164 DQDTRDPQHVCETLTARPTLQAFLRP-KINRNHKGYGYIELIRHTTLRT--RGYI-SNDT 219
Query: 449 FVIKTQV 455
+++ +
Sbjct: 220 LLVRVDI 226
>gi|170716492|gb|ACB31948.1| TNF receptor-associated factor 6 [Laticauda colubrina]
Length = 203
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q+ ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 64 METQQSQMGDLKRTIRTLEEKIVDIEAQQCNGIFLWKIENFSVYLKAQEEERPVVIHSPG 123
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 124 FYTGKPGYKLCLRLHIQLPSVQRCGNYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 182
>gi|170716452|gb|ACB31928.1| TNF receptor-associated factor 6 [Atractaspis irregularis]
Length = 211
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQHSQMGDLKRTIRSLEEKIADIEAQQCNGIFLWKIENFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSVQRCGNYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|341931997|gb|AEL04307.1| TNF receptor-associated factor 6, partial [Uta stansburiana]
Length = 200
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 61 METQNSQMGDLKRTIRNLEEKITEMQAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 120
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSS 394
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 121 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQSE 180
Query: 395 EFS 397
S
Sbjct: 181 GLS 183
>gi|341931961|gb|AEL04289.1| TNF receptor-associated factor 6, partial [Phymaturus palluma]
Length = 203
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + + + +K EE + + CNG++ WK+ +F LK +E + +S
Sbjct: 64 METQNSHMGDLKRTIKNLEEKITEMESQQCNGIFLWKIEHFSVYLKAQEEKSPVVIHSPG 123
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 124 FYTGKPGYKLCMRLHIQPPNVPRCANYISLFVHVMQGEYDSHLSWPFQGTIRLSILDQS 182
>gi|341931957|gb|AEL04287.1| TNF receptor-associated factor 6, partial [Phrynocephalus
mystaceus]
Length = 199
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M + M + K V N E + + E + CNG++ WK+ NF +
Sbjct: 54 HQIRELIAKMETQNRHMGDLKRTVRNLEGRVAEMEAHQ-------CNGIFVWKIENFSSY 106
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED-AQYLSLFIHLVQGENDDILDWPF 381
L+ +E +S FY+ GY+ C R++I + A Y+SLF+H++QG+ D L WPF
Sbjct: 107 LRAQEEGRSVVIHSPGFYTGKPGYKLCLRLHIQAQRCANYISLFVHIMQGDYDSHLPWPF 166
Query: 382 VGRIRFTALNTS 393
G IR + L+ S
Sbjct: 167 QGTIRLSILDQS 178
>gi|392936089|gb|AFM93109.1| TNF receptor-associated factor 6, partial [Chelydra serpentina]
Length = 200
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q V + + ++ EE + + CNG+Y WK+ NF LK +E +S
Sbjct: 61 METQSAHVGDLKRTIQNLEEKITEMEAQQCNGIYIWKIENFSIHLKAQEEERPVVIHSPG 120
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I ++Q ++SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 121 FYTGKPGYKLCLRLHIQLPNSQRCANFISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 179
>gi|291242395|ref|XP_002741094.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 552
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYF 334
LE+K+K + + LK E ++ ++ +GV WK+ +F K ++ +
Sbjct: 369 LERKVKAQDRIIALKDVAIAEQDLRIQSLEMASYDGVLVWKITDFARKRQDAISGRTTSI 428
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS CFYSS GY+ C R+ I+ + ++SLF +++GE+D +L WPF ++ L+
Sbjct: 429 YSPCFYSSRHGYKMCARIYINGDGMGKGNHVSLFFVIMKGESDALLRWPFRQKVTMMWLD 488
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
++ + D + D SF+RP + A G F+ ++D+ P ++ +D F+
Sbjct: 489 QNNRNHVIDAFRPDPTSSSFQRPKHDM--NIASGCPLFMPLSDLDSPLHHYVKDDTAFI 545
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC------PIDEKVLTKDD 66
++ +F C +C + L D I T CGH++C C + + YC ID+ VLT
Sbjct: 14 VEDKFLCQLCEKVLCDPIQTYCGHRYCKTCFEDLLRYNESVYCNACKAEGIDDTVLTSQQ 73
Query: 67 IFIDNYTRREILENNLTCPYKQCSSQLSIPEYE-SHVNTC 105
I+ D RE+ ++ C C+ + +Y +H+ TC
Sbjct: 74 IYPDRAIVRELNSQDVQCVNVGCNWTGNFRDYHLNHIPTC 113
>gi|308368780|gb|ADO30307.1| TNF receptor-associated factor 6 [Acontias meleagris]
Length = 213
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + + + ++ EE + + CNG++ WK+ NF LK +E
Sbjct: 70 LTAKMETQITHIGDLKRTIRNLEEKIAEIEAQQCNGIFIWKIENFSIYLKAQEEEKPVVI 129
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I + Q Y+SLF+H +QG+ D+ L WPF G IR + L
Sbjct: 130 HSPGFYTGKPGYKLCLRLHIQSPNVQHCANYISLFVHAMQGQYDNHLLWPFQGTIRLSIL 189
Query: 391 NTS 393
+ S
Sbjct: 190 DQS 192
>gi|308368748|gb|ADO30291.1| TNF receptor-associated factor 6 [Elgaria multicarinata]
Length = 199
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ N + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 60 METQSSQMGNLKCTIRNLEEKITEIQAQQCNGIFLWKIENFXIYLKAQEEERPVVIHSPG 119
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H ++G+ D L WPF G IR + L+ +
Sbjct: 120 FYTGRPGYKLCLRLHIQLPNAQRCANYISLFVHTMKGDYDSHLPWPFQGTIRLSILDQT 178
>gi|170716496|gb|ACB31950.1| TNF receptor-associated factor 6 [Charina trivirgata]
Length = 211
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKIVDLEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|52346054|ref|NP_001005074.1| TNF receptor-associated factor 4 [Xenopus (Silurana) tropicalis]
gi|49899984|gb|AAH76992.1| TNF receptor-associated factor 4 [Xenopus (Silurana) tropicalis]
Length = 470
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 193/495 (38%), Gaps = 105/495 (21%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L +F C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 12 LRRKFLCPLCGKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDR 70
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
+++ ++ C + + C + + + H+N C
Sbjct: 71 DLETQVMGLSIRCIHSEEGCRWSGQLKQLQPHLNICAFNV-------------------- 110
Query: 130 GIPTNKRNSKILTVTVFPEHL----------------NMQGSSNENFP--CKFYQVGC-- 169
IP R S L PEH+ + G + E+ C V C
Sbjct: 111 -IPCPNRCSTKLIRRDLPEHMQHDCPKRKVRCEFCGADFTGEAYEDHQGCCPQESVYCEN 169
Query: 170 -------REVFKSQALLE--KHYDLKTSFHLELLFNKYCSDGSQSTNTP----------S 210
R V +L+E K + E +F+ S Q P S
Sbjct: 170 KCGARMMRRVLSQHSLVECPKRTQPCPYCNKEFVFDTIQSHQYQCPRYPTPCPNQCGIAS 229
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVY 270
R+D SN +K+ + + P K D CK G + + +
Sbjct: 230 IAREDLSNH-------LKDSCSSALVLCPFK-----------DSGCKHRGPKITISRHLE 271
Query: 271 ERMV--LLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK 328
E M L S L + + EL KQ EE+ + GV WK+ ++ K++E K
Sbjct: 272 ENMRAHLSMMSSLVSRQRQEILELR-KQVEELSVSS-----EGVLIWKISDYSRKVQEAK 325
Query: 329 EINRY-FYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGR 384
+ +S FY+ +GY+ + + YLS++I ++ GE D++L+WPF R
Sbjct: 326 VRGNFESFSPPFYTHKYGYKLQVSAFLNGNGSGEGSYLSVYIRVLPGEYDNLLEWPFSYR 385
Query: 385 IRFTALNTSSEF-----SITDEIQSDKNFDSFKRPV----NFFLNKKAFGFNNFIRVADV 435
+ F+ L+ S IT+ D N+ +F++P + + FG+ FI D+
Sbjct: 386 VTFSLLDQSDPSLSKPQHITETFNPDPNWKNFQKPTGSRNSLDESTLGFGYPKFISHEDI 445
Query: 436 LDPGRGFLMEDDTFV 450
R ++ ++ F+
Sbjct: 446 RK--RNYVRDNAIFL 458
>gi|335773209|gb|AEH58316.1| TNF receptor-associated factor 6-like protein, partial [Equus
caballus]
Length = 188
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 51 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 109
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP C ++ + E H C
Sbjct: 110 AKREILSLMVKCPNGGCLHKMELRHLEDHQAHC 142
>gi|308368756|gb|ADO30295.1| TNF receptor-associated factor 6 [Xenosaurus grandis]
Length = 213
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ NF L+ +E +S
Sbjct: 74 METQNSQMGDLKRTIRNLEEKIAEIQAQQCNGIFIWKIENFSIYLQAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QG+ D L WPF G IR + L+ +
Sbjct: 134 FYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHVMQGDYDSHLPWPFQGTIRLSILDQT 192
>gi|170716432|gb|ACB31918.1| TNF receptor-associated factor 6 [Xenosaurus platyceps]
Length = 211
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ NF L+ +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKIAEIQAQQCNGIFIWKIENFSIYLQAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QG+ D L WPF G IR + L+ +
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHVMQGDYDSHLPWPFQGTIRLSILDQT 190
>gi|170716520|gb|ACB31962.1| TNF receptor-associated factor 6 [Tropidophis haetianus]
Length = 211
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQSSQMGDLKRTIRNLEEKIADIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSTQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|341931911|gb|AEL04264.1| TNF receptor-associated factor 6, partial [Brookesia brygooi]
Length = 212
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E+ + + E + CNG++ WK+ NF
Sbjct: 64 HQIRELIAKMETQSSQMGDLKSTIRNLEVKIAEMEAHQ-------CNGIFVWKIENFSIY 116
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I AQ ++SLF+H++QG+ D L
Sbjct: 117 LKAQEEERPVVIHSPGFYTGRPGYKLCMRLHIQLPTAQRCANFISLFVHIMQGDYDSHLP 176
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 177 WPFQGTIRLSILDQS 191
>gi|308368754|gb|ADO30294.1| TNF receptor-associated factor 6 [Shinisaurus crocodilurus]
Length = 213
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M E + + N E Q EIE + CNG++ WK+ NF
Sbjct: 65 HQIRELIAKMETQNSQMGELRCTIRNLE---DQIAEIEA----QQCNGIFIWKIANFSIY 117
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H +QG+ D L
Sbjct: 118 LRAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHTMQGDYDSHLT 177
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ +
Sbjct: 178 WPFQGTIRLSILDQT 192
>gi|341931933|gb|AEL04275.1| TNF receptor-associated factor 6, partial [Draco blanfordii]
Length = 213
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E + + E + CNG++ WK+ NF
Sbjct: 65 HQIRELIAKMETQNGKMGDLKRTIRNLEGKIAELEAHQ-------CNGIFIWKIENFSIY 117
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
L+ +E + +S FY+ GY+ C R++I +A Y+SLF+H++QG+ D L
Sbjct: 118 LRAQEEERQVVIHSPGFYTGKPGYKLCMRLHIQVPNAHRGPNYISLFVHIMQGDYDSHLP 177
Query: 379 WPFVGRIRFTALNTSSE 395
WPF G IR + L+ S E
Sbjct: 178 WPFHGTIRLSILDQSDE 194
>gi|532619|gb|AAC37663.1| TNF receptor associated factor 1 [Mus musculus]
Length = 409
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D HLL L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 218 DREHLLSL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 269
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 270 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 329
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 330 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 387
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 388 SPKHAY-VKDDTMFLKCIV 405
>gi|399931696|gb|AFP57404.1| TNF receptor-associated factor 6, partial [Python molurus]
Length = 213
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 74 METQNSQMGDLKRTIRNLEEKITDIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPSVQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 192
>gi|296202166|ref|XP_002748281.1| PREDICTED: TNF receptor-associated factor 4 [Callithrix jacchus]
Length = 470
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 186/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G C D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCLEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC +P
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L P NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|341931967|gb|AEL04292.1| TNF receptor-associated factor 6, partial [Pogona vitticeps]
Length = 214
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLS 363
CNG++ WK+ NF LK +E +S FY+ GY+ C R++I +AQ Y+S
Sbjct: 104 CNGIFIWKIENFSIYLKAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYIS 163
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTS 393
LF+H++QG+ D L WPF G IR + L+ S
Sbjct: 164 LFVHIMQGDYDSHLPWPFQGTIRLSILDQS 193
>gi|440911195|gb|ELR60901.1| TNF receptor-associated factor 1 [Bos grunniens mutus]
Length = 415
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R++ L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVLELQQTLAQKDQALGKLEQSLRLVEEAS-------YDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D N SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLNSASFQRPQSE--TNVASGCPLFFPLNKLQ 393
Query: 437 DPGRGFLMEDDTFV 450
P ++ +D FV
Sbjct: 394 SPKHAYVKDDTMFV 407
>gi|238538001|pdb|3HCS|A Chain A, Crystal Structure Of The N-Terminal Domain Of Traf6
gi|238538002|pdb|3HCS|B Chain B, Crystal Structure Of The N-Terminal Domain Of Traf6
Length = 170
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 15 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 73
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP + C ++ + E H C
Sbjct: 74 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHC 106
>gi|281485900|gb|ADA70511.1| TNF receptor-associated factor 6 [Crotaphytus collaris]
Length = 184
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V + + +K EE + + C+G+Y WK+ +F LK +E +S
Sbjct: 72 METQNSQVGDLKRTIKNLEEKITEMEAQQCSGIYIWKIEHFSVYLKAREEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 184
>gi|392936109|gb|AFM93119.1| TNF receptor-associated factor 6, partial [Podocnemis expansa]
Length = 199
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E + + E + CNG+Y WK+ NF
Sbjct: 51 HQIRELIAKMETQSNQMGDLKRTIQNLEEKITEMEA-------QQCNGIYIWKIENFSMH 103
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNI----SREDAQYLSLFIHLVQGENDDILD 378
L+ +E +S FY+ GY+ C R++I S+ A ++SLF+H +QGE D L
Sbjct: 104 LRAQEEERPVVIHSPGFYTGKPGYKLCLRLHIQLPSSQRCANFISLFVHTMQGEYDSHLP 163
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 164 WPFQGTIRLSILDQS 178
>gi|341931921|gb|AEL04269.1| TNF receptor-associated factor 6, partial [Coleonyx variegatus]
Length = 200
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + NG++ WK+ NF LK +E +S
Sbjct: 61 METQNTHMGNLKRTIRNLEEKITEMEAQQSNGIFLWKIENFSMYLKAQEEERPVVIHSPG 120
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++ GE+D L WPF G IR + L+ S
Sbjct: 121 FYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHVMLGEHDSHLPWPFQGTIRLSILDQS 179
>gi|300796240|ref|NP_001179730.1| TNF receptor-associated factor 1 [Bos taurus]
gi|296484329|tpg|DAA26444.1| TPA: TNF receptor-associated factor 1 [Bos taurus]
Length = 415
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R++ L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVLELQQTLAQKDQALGKLEQSLRLVEEAS-------YDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D N SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLNSASFQRPQSE--TNVASGCPLFFPLNKLQ 393
Query: 437 DPGRGFLMEDDTFV 450
P ++ +D FV
Sbjct: 394 SPKHAYVKDDTMFV 407
>gi|308368752|gb|ADO30293.1| TNF receptor-associated factor 6 [Heloderma suspectum]
Length = 211
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKVADIQGQQCNGIFIWKIEKFSIYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QGE D L WPF G IR + L+ +
Sbjct: 132 FYTGKPGYKLCMRLHIQLPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSILDQT 190
>gi|341931979|gb|AEL04298.1| TNF receptor-associated factor 6, partial [Sceloporus variabilis]
Length = 212
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 73 METQNCQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 132
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 133 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQS 191
>gi|341931929|gb|AEL04273.1| TNF receptor-associated factor 6, partial [Ctenophorus isolepis]
Length = 214
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLS 363
CNG++ WK+ NF LK +E +S FY+ GY+ C R++I +AQ Y+S
Sbjct: 104 CNGIFIWKIENFSIYLKAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYIS 163
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTS 393
LF+H++QG+ D L WPF G IR + L+ S
Sbjct: 164 LFVHIMQGDYDSHLPWPFQGTIRLSILDQS 193
>gi|341931939|gb|AEL04278.1| TNF receptor-associated factor 6, partial [Hydrosaurus sp.
DGM-2011]
Length = 213
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E + + E + CNG++ WK+ NF
Sbjct: 65 HQIRELIAKMETQNSQMGDLKRTIRNLEGKIAEMEA-------QQCNGIFIWKIENFSIF 117
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H++QG+ D L
Sbjct: 118 LRAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYISLFVHIMQGDYDSHLP 177
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 178 WPFQGTIRLSILDQS 192
>gi|281485902|gb|ADA70512.1| TNF receptor-associated factor 6 [Gambelia wislizenii]
Length = 184
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V + + ++ EE + + C+G+Y WK+ +F LK +E +S
Sbjct: 72 METQNSQVGDLKRTIRNLEEKXTEMEAQQCSGIYIWKIEHFSVYLKAREEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNAQRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 184
>gi|308368794|gb|ADO30314.1| TNF receptor-associated factor 6 [Bipes canaliculatus]
Length = 211
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q +V + + ++ E + + CNG++ WK+ NF LK +E
Sbjct: 68 LTAKMETQNSQVGDLKRTIRTLEGKMAEMEAQQCNGIFLWKIENFSIYLKAQEEERPVVI 127
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H++QG+ D L WPF G IR + L
Sbjct: 128 HSPGFYTGRPGYKLCLRLHLQLPTAQRCANYISLFVHIMQGDYDSHLPWPFQGTIRLSIL 187
Query: 391 NTS 393
+ S
Sbjct: 188 DQS 190
>gi|170716516|gb|ACB31960.1| TNF receptor-associated factor 6 [Trachyboa boulengeri]
Length = 211
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQSYQMGDLKRTIRNLEEKIADLEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSTQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|341931985|gb|AEL04301.1| TNF receptor-associated factor 6, partial [Trachyboa boulengeri]
Length = 213
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 74 METQSYQMGDLKRTIRNLEEKIADLEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPSTQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 192
>gi|341931917|gb|AEL04267.1| TNF receptor-associated factor 6, partial [Chelosania brunnea]
Length = 214
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLS 363
CNG++ WK+ NF L+ +E +S FY+ GY+ C R++I +AQ Y+S
Sbjct: 104 CNGIFIWKIENFSVYLRAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYIS 163
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTS 393
LF+H++QG+ D L WPF G IR + L+ S
Sbjct: 164 LFVHIMQGDYDSHLPWPFQGTIRLSILDQS 193
>gi|308368766|gb|ADO30300.1| TNF receptor-associated factor 6 [Dibamus novaeguineae]
Length = 200
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 298 EEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISR 356
E++ + L+ CNG++ WK+ NF LK +E +S FY+ GY+ C R++I
Sbjct: 80 EQVSEMKALQ-CNGIFLWKIENFSIYLKAQEEERPVVIHSPGFYTGKPGYKLCLRLHIQL 138
Query: 357 EDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
+AQ Y+S+F+H +QGE D L WPF G IR + L+ S
Sbjct: 139 PNAQRCANYISIFVHTMQGEYDSHLPWPFQGTIRLSILDQS 179
>gi|308368750|gb|ADO30292.1| TNF receptor-associated factor 6 [Heloderma horridum]
Length = 213
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ F LK +E +S
Sbjct: 74 METQNSQMGDLKRTIRNLEEKIADIQGQQCNGIFIWKIEKFSIYLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QGE D L WPF G IR + L+ +
Sbjct: 134 FYTGKPGYKLCMRLHIQLPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLSILDQT 192
>gi|341931965|gb|AEL04291.1| TNF receptor-associated factor 6, partial [Physignathus lesueurii]
Length = 201
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M + + K + N E + + E + CNG++ WK+ NF
Sbjct: 53 HQIRELIAKMETQNSQIGDLKXTIQNLEGKIAEMEAHQ-------CNGIFIWKIENFSIY 105
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H++QG+ D L
Sbjct: 106 LRAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYISLFVHIMQGDYDSHLP 165
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 166 WPFQGTIRLSILDQS 180
>gi|308368744|gb|ADO30289.1| TNF receptor-associated factor 6 [Anniella pulchra]
Length = 211
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNTQMGDLKCTIRNLEEKITEIQAQQCNGIFIWKIENFSIYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H + GE D L WPF G IR + L+ +
Sbjct: 132 FYTGKPGYKLCMRLHIQLPSAQRCANYISLFVHTMLGEYDSHLPWPFQGTIRLSILDQT 190
>gi|170716474|gb|ACB31939.1| TNF receptor-associated factor 6 [Epicrates striatus]
Length = 204
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 65 METQNSQMGDLKRTIRNLEEKIVDIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 124
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Q Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 125 FYTGKPGYKLCLRLHIQLPSVQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 183
>gi|170716460|gb|ACB31932.1| TNF receptor-associated factor 6 [Calabaria reinhardtii]
Length = 211
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKIVDIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGYYDSHLPWPFQGTIRLSILDQS 190
>gi|341931973|gb|AEL04295.1| TNF receptor-associated factor 6, partial [Ctenophorus
adelaidensis]
Length = 203
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M + + K + N E + + E + CNG++ WK+ NF
Sbjct: 55 HQIRELIAKMETXNSQIGDLKRTIQNLEGKIAEIEAHQ-------CNGIFIWKIENFSIY 107
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H++QG+ D L
Sbjct: 108 LRAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYISLFVHIMQGDYDSHLP 167
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 168 WPFQGTIRLSILDQS 182
>gi|392936093|gb|AFM93111.1| TNF receptor-associated factor 6, partial [Rhacodactylus
auriculatus]
Length = 213
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 74 METQNTHMGNLKRTIRNLEERITEMEAQQCNGIFIWKIEHFSMYLKSQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I A Y+SLF+H ++GE+D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPSAPRCANYISLFVHTMKGEHDSHLPWPFQGTIRLSILDQS 192
>gi|341931993|gb|AEL04305.1| TNF receptor-associated factor 6, partial [Uranoscodon
superciliosus]
Length = 213
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + +K EE + + CNG++ WK+ +F LK +E +S
Sbjct: 74 METQNCQMGALKRTIKNLEEKICEMEAQQCNGIFIWKIEHFSVYLKTQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I A+ Y+SLF+H++QGE D+ L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQLPKAERCANYISLFVHVMQGEYDNYLSWPFQGTIRLSILDQS 192
>gi|170716476|gb|ACB31940.1| TNF receptor-associated factor 6 [Eryx colubrinus]
Length = 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRSLEEKIVDIEAQQCNGIFLWKIENFSMYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G R + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTXRLSILDQS 190
>gi|341931975|gb|AEL04296.1| TNF receptor-associated factor 6, partial [Saltuarius cornutus]
Length = 198
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 59 METQNTHMGNLKRTIRNLEERITEMEAQQCNGIFIWKIEHFSMYLKAQEEDRPVVIHSPG 118
Query: 339 FYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLF+H ++GE+D L WPF G IR + L+ S
Sbjct: 119 FYTGKPGYKLCLRLHIQLPNAPRCANYISLFVHTMKGEHDSHLPWPFQGTIRLSILDQS 177
>gi|31981953|ref|NP_033447.2| TNF receptor-associated factor 1 [Mus musculus]
gi|342187068|sp|P39428.2|TRAF1_MOUSE RecName: Full=TNF receptor-associated factor 1
gi|26325122|dbj|BAC26315.1| unnamed protein product [Mus musculus]
gi|74143742|dbj|BAE41205.1| unnamed protein product [Mus musculus]
gi|74192633|dbj|BAE43086.1| unnamed protein product [Mus musculus]
gi|148676690|gb|EDL08637.1| Tnf receptor-associated factor 1, isoform CRA_b [Mus musculus]
Length = 409
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 218 DREHILSL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 269
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 270 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 329
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 330 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 387
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 388 SPKHAY-VKDDTMFLKCIV 405
>gi|148676689|gb|EDL08636.1| Tnf receptor-associated factor 1, isoform CRA_a [Mus musculus]
Length = 412
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 221 DREHILSL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 272
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 273 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 332
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 333 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 390
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 391 SPKHAY-VKDDTMFLKCIV 408
>gi|951277|emb|CAA56491.1| cystein rich domain associated to RING and TRAF protein [Homo
sapiens]
Length = 470
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/479 (19%), Positives = 183/479 (38%), Gaps = 79/479 (16%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC IP
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------IP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L NQ G
Sbjct: 170 KCGARMMRGLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMV---------LLEQSMLEQK 284
+ D C K G KL R V ++ + Q+
Sbjct: 230 VAREDLPGHLKDSCNTALVLCPFKDSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQR 289
Query: 285 IKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSC 343
++ L++ D V++ WK+ ++ +L+E K + N +S FY+
Sbjct: 290 QELQELRRELEELSVGSDGVLI--------WKIGSYGRRLQEAKAKPNLECFSPAFYTHK 341
Query: 344 FGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF---- 396
+GY+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 342 YGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKP 401
Query: 397 -SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 402 QHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|392936117|gb|AFM93123.1| TNF receptor-associated factor 6, partial [Callopistes maculatus]
Length = 213
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE +V + CNG++ WK+ NF LK +E +S
Sbjct: 74 MENQNTQMRDLKRTIRNLEEKIADVESQQCNGIFIWKIENFSIYLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I A Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPSAPRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 192
>gi|341931919|gb|AEL04268.1| TNF receptor-associated factor 6, partial [Chlamydosaurus kingii]
Length = 202
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M + + K + N E + + E + CNG++ WK+ NF
Sbjct: 54 HQIRELIAKMETQNSQIGDLKRTIQNLESKIAEMEAHQ-------CNGIFIWKIENFSIY 106
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H++QG+ D L
Sbjct: 107 LRAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYISLFVHIMQGDYDSHLP 166
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 167 WPFQGTIRLSILDQS 181
>gi|291405475|ref|XP_002718965.1| PREDICTED: TNF receptor-associated factor 4-like [Oryctolagus
cuniculus]
Length = 470
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 190/483 (39%), Gaps = 87/483 (18%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+N T SF N P
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLN------------------TCSF-NVVACP 114
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R L+ P HL C+F GC F +A E H + + S +
Sbjct: 115 N--RCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCD--FSGEAY-ESHEGMCPQESVY 166
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN------KEHE---SKLWDPNK 241
E NK C H + + + Y K + H+ +L P
Sbjct: 167 CE---NK-CGSRMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------M 280
NQ G + D C K G KL R V E+S M
Sbjct: 223 NQCGVGTVAREDLPGHLKDSCSTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAM 280
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACF 339
+ + EL + E+E+ V +GV WK+ ++ +L+E K + N +S F
Sbjct: 281 MCALVSRQRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAF 337
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 338 YTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPG 397
Query: 397 -----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D
Sbjct: 398 LAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDA 455
Query: 448 TFV 450
F+
Sbjct: 456 VFI 458
>gi|291228807|ref|XP_002734368.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 480
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 188/474 (39%), Gaps = 89/474 (18%)
Query: 67 IFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--------------------- 105
IF+D RE+ N+ C C+ EYE HV++C
Sbjct: 4 IFLDRAIAREMRVLNVLCVNSGCTWTGYFREYEGHVDSCKFELIICSLEGCTQLIQRQHL 63
Query: 106 --------YLKYSQPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGS-- 155
Y++ + + DI S + + + P K + + V + E +
Sbjct: 64 EKHTTEECYMRMVKCTYCDIDYSYNNLKIHQNQCPKMKVSCDLCGVALLREKIEKHKDIT 123
Query: 156 ----SNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDG---SQSTNT 208
+ + PC++ +GC + + H + HLELL N S+ N
Sbjct: 124 TGDCTKKRQPCEYEPIGC-TIMVEEGQQSVHNKNEVQHHLELLRNSTVKSKDLISRIQND 182
Query: 209 PSH------------GRQDTSNQ--KEIEAYLMKNKEHES------KLWDPNKNQAGDDK 248
+H R T Q KE E L +N ++ S KL D ++ K
Sbjct: 183 RAHINELNPIIEQNRARIGTIQQRVKECEVSLQRNAKYVSEGNSNDKLKDVIDSKQKQIK 242
Query: 249 --------------SSEGDCSC--KTCGDNSHLLKLVYERMVLLEQSM--LEQKIKVNNF 290
+ EG + + +N L+++ + ++Q + LE K + +
Sbjct: 243 ELLAKLIVLERKVNTYEGMVAVLSREMENNDEKLRIIKRQENQIKQRIKDLENKCRSQDR 302
Query: 291 ELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCF 344
+ LK E ++ ++L +GV WK+ +F K ++ + YS F++S +
Sbjct: 303 IIALKDVSLAEQDLRIQLLEMTTYDGVLVWKISDFARKRRDAISGRTTSIYSPHFFTSPY 362
Query: 345 GYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDE 401
GY+ C RV ++ + ++SLF +++GE D IL WPF ++ L+ S+ + D
Sbjct: 363 GYKLCARVYLNGDGMGKGNHVSLFFVVMKGEYDAILKWPFRQKVTLMWLDQSNREHVIDA 422
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D + SFKRP A G F+ + + LD G+ ++DD I+ V
Sbjct: 423 FRPDPSSSSFKRPTGDM--NIASGCPLFMPL-NALDRGQSEYVKDDVAFIRIIV 473
>gi|399931698|gb|AFP57405.1| TNF receptor-associated factor 6, partial [Ungaliophis
continentalis]
Length = 213
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE ++ + CNG++ WK+ NF L+ +E +S
Sbjct: 74 METQNSQMGDLKRTIRNLEEKIVDIEAQQCNGIFLWKIENFSMYLRAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G +R + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTMRLSILDQS 192
>gi|341931941|gb|AEL04279.1| TNF receptor-associated factor 6, partial [Hypsilurus boydii]
Length = 213
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLS 363
CNG++ WK+ NF L+ +E +S FY+ GY+ C R++I +AQ Y+S
Sbjct: 103 CNGIFIWKIENFSIYLRAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYIS 162
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTS 393
LF+H++QG+ D L WPF G IR + L+ S
Sbjct: 163 LFVHIMQGDYDSHLPWPFQGTIRLSILDQS 192
>gi|341931963|gb|AEL04290.1| TNF receptor-associated factor 6, partial [Physignathus cocincinus]
Length = 200
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M + + K + N E + + E + CNG++ WK+ NF
Sbjct: 52 HQIRELIAKMETQNSQIGDLKRTIQNLEGKIAEMEAHQ-------CNGIFIWKIENFSIY 104
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
L+ +E +S FY+ GY+ C R++I +AQ Y+SLF+H++QG+ D L
Sbjct: 105 LRAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQVPNAQRCANYISLFVHIMQGDYDSHLP 164
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 165 WPFQGTIRLSILDQS 179
>gi|399931690|gb|AFP57401.1| TNF receptor-associated factor 6, partial [Cricosaura typica]
Length = 201
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E L + E + CNG++ WK+ NF
Sbjct: 53 HQIRELIAKMETQNSHMGDLKRVIQNLEEKLAEMEAHQ-------CNGIFIWKIENFSVY 105
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +A Y+SLF+H +QG+ D L
Sbjct: 106 LKAQEEEKPVVIHSPGFYTGKPGYKLCMRLHIQLPNAPRCANYISLFVHTMQGDYDSHLP 165
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 166 WPFQGTIRLSILDQS 180
>gi|308368788|gb|ADO30311.1| TNF receptor-associated factor 6 [Pholidobolus macbrydei]
Length = 205
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q +V + + ++ EE + + CNG + WK+ F LK +E +S
Sbjct: 74 MENQNTQVRDLKCTIRNLEEKISEIEAQQCNGFFIWKIEXFSNYLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I AQ Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQLPSAQRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 192
>gi|341931945|gb|AEL04281.1| TNF receptor-associated factor 6, partial [Leiolepis belliana]
Length = 213
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E + + E + CNG++ WK+ NF
Sbjct: 65 HQIRELIAKMETQNSQMGDLKRTIRNLEGKIAEMEAHQ-------CNGIFLWKLENFSIY 117
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQY----LSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I +AQ +SLF+H++QG+ D L
Sbjct: 118 LKAQEEERPVVIHSPGFYTGRPGYKLCMRLHIQVPNAQRCANCISLFVHIMQGDYDSHLP 177
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR + L+ S
Sbjct: 178 WPFQGTIRLSVLDQS 192
>gi|194381274|dbj|BAG58591.1| unnamed protein product [Homo sapiens]
Length = 451
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+ +LE+ + +N + L + EE + NG WK+ ++ K +E +
Sbjct: 258 QRLAVLEEETNKHDTHINIHKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDG 317
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 318 HTVSIFSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVT 377
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
L+ S + +I + + D N SFKRP A G F+ VL+ + ++D
Sbjct: 378 LMLLDQSGKKNIMETFKPDPNSSSFKRPDGEM--NIASGCPRFV-AHSVLENAKNAYIKD 434
Query: 447 DTFVIKTQV 455
DT +K V
Sbjct: 435 DTLFLKVAV 443
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYE 99
+RE+L + C C++++ + Y+
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQ 126
>gi|341931951|gb|AEL04284.1| TNF receptor-associated factor 6, partial [Moloch horridus]
Length = 214
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 15/177 (8%)
Query: 229 NKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLE--QKIK 286
N H +DP+ G S E CS + D ++ + R+V + + E K++
Sbjct: 20 NFHHGGLPFDPSLFSQGLPPSCE--CSPEV-QDFKETIQQLEGRLVRQDHQIRELIAKME 76
Query: 287 VNNFEL-NLKQTEEIEDNVVLKL----CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFY 340
N ++ +LK+T + + + +L CNG++ WK+ NF L+ +E +S FY
Sbjct: 77 TQNSQIGDLKRTIQNLEGKIAELEAHQCNGIFIWKIENFSIYLRAQEEERPVVIHSPGFY 136
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
+ GY+ C R++I +AQ Y+SLF+H++QG+ D L WPF G IR + L+ S
Sbjct: 137 TGKPGYKLCMRLHIQVPNAQRCANYISLFVHIMQGDYDSHLPWPFHGTIRLSILDQS 193
>gi|341931959|gb|AEL04288.1| TNF receptor-associated factor 6, partial [Phrynosoma platyrhinos]
Length = 200
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + NG++ WK+ +F LK +E +S
Sbjct: 61 METQNSQMGDLKRTIRNLEEKITEMEAQQSNGIFIWKIEHFSVYLKAQEEERPVVIHSPA 120
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I + A Y+SLFIH +QGE D L WPF G IRF+ L+ S
Sbjct: 121 FYTGKPGYKLCMRLHIQLPNVAKCANYISLFIHTMQGEYDSHLSWPFQGTIRFSILDQS 179
>gi|308368796|gb|ADO30315.1| TNF receptor-associated factor 6 [Rhineura floridana]
Length = 213
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q ++ + + ++ EE + + CNG++ WK+ NF LK +E
Sbjct: 70 LAAKMETQNSQMGDLKCTIRNLEEKIVEMEAQQCNGIFLWKIENFSIYLKAQEEERPVVI 129
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R++I +AQ Y+SLF+H ++G+ D L WPF G IR + L
Sbjct: 130 HSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMRGDYDSHLPWPFQGTIRLSIL 189
Query: 391 NTS 393
+ S
Sbjct: 190 DQS 192
>gi|392936091|gb|AFM93110.1| TNF receptor-associated factor 6, partial [Tupinambis teguixin]
Length = 213
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 74 MENQNSQMRDLKRTIRNLEEKLAEMEAQQCNGIFIWKIENFSIXLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPNAPRCANYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 192
>gi|308368742|gb|ADO30288.1| TNF receptor-associated factor 6 [Pseudopus apodus]
Length = 210
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ NF L+ +E +S
Sbjct: 71 METQNSQMGDLKCTIQNLEEKITEIQAQQCNGIFIWKIENFGIYLRAQEEERPVVIHSPG 130
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H+++G+ D L WPF G IR + L+ +
Sbjct: 131 FYTGKPGYKLCMRLHIQSPNAQRCANYISLFVHVMKGDFDSHLPWPFQGTIRLSILDQT 189
>gi|341931987|gb|AEL04302.1| TNF receptor-associated factor 6, partial [Trapelus agilis]
Length = 210
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNI-SREDAQYLSLFI 366
CNG++ WK+ NF L+ +E +S FY+ GY+ C R++I ++ A Y+SLF+
Sbjct: 103 CNGIFIWKIENFSIYLRAQEEERPVVIHSPGFYTGKPGYKLCLRLHIHAQRRANYISLFV 162
Query: 367 HLVQGENDDILDWPFVGRIRFTALNTS 393
H++QG+ D L WPF G IR + L+ S
Sbjct: 163 HIMQGDYDSHLPWPFQGTIRLSILDQS 189
>gi|341931977|gb|AEL04297.1| TNF receptor-associated factor 6, partial [Sauromalus ater]
Length = 213
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + +K EE + + CNG++ WK+ +F LK +E +S
Sbjct: 74 METQNSQMGDLKRTIKNLEEKITELEAEQCNGIFLWKIEHFSVYLKAQEEEKPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLF+H+++GE D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCMRLHIQLPNAPRCPNYISLFVHVMKGEYDSHLAWPFQGTIRLSILDQS 192
>gi|341931981|gb|AEL04299.1| TNF receptor-associated factor 6, partial [Stenocercus guentheri]
Length = 208
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSAC 338
M Q + + + +K EE + + CNG++ WK+ F LK + +E + +S
Sbjct: 69 METQNSHIGDLKCTIKNLEEKITEMESQQCNGIFIWKIERFSVYLKAQEEERSVVIHSPG 128
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ R++I + Q Y+SLF+H++QGE D+ L WPF G IR + L+ S
Sbjct: 129 FYTGKPGYKLSMRLHIQPPNVQRCGNYISLFVHIMQGEYDNYLPWPFQGTIRLSILDQS 187
>gi|341931955|gb|AEL04286.1| TNF receptor-associated factor 6, partial [Petrosaurus mearnsi]
Length = 198
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E + + E + CNG++ WK+ +F
Sbjct: 50 HQIRELIAKMETQNSQMXDLKRTIRNLEEKITEMEA-------QQCNGIFIWKIEHFSVY 102
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I + A Y+SLF+H++QGE D L
Sbjct: 103 LKAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLP 162
Query: 379 WPFVGRIRFTALNTS 393
WPF G IR L+ S
Sbjct: 163 WPFQGTIRLCILDQS 177
>gi|170716522|gb|ACB31963.1| TNF receptor-associated factor 6 [Typhlops jamaicensis]
Length = 211
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Query: 284 KIKVNNFELN-LKQT----EEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSA 337
K++ N+++ LK+T EE + CNG++ WK+ NF LK +E +S
Sbjct: 71 KMETQNYQMGELKRTIRNLEEKMSEIEAHQCNGIFLWKIENFSMYLKAQEEERPVVIHSP 130
Query: 338 CFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I + Q Y+SLF+H +QG D L WPF G IR + L+ S
Sbjct: 131 GFYTGKPGYKLCLRLHIQLPNVQRCANYISLFVHTMQGVYDSHLPWPFQGTIRLSILDQS 190
>gi|403420632|ref|NP_001258169.1| TNF receptor-associated factor 1 [Rattus norvegicus]
Length = 409
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 218 DREHVLNL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 269
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 270 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 329
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 330 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 387
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 388 SPKHAY-VKDDTMFLKCIV 405
>gi|109469766|ref|XP_001080233.1| PREDICTED: TNF receptor-associated factor 1 [Rattus norvegicus]
Length = 480
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 289 DREHVLNL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 340
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 341 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 400
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 401 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 458
Query: 437 DPGRGFLMEDDTFV 450
P ++ +D F+
Sbjct: 459 SPKHAYVKDDTMFL 472
>gi|405966255|gb|EKC31562.1| TNF receptor-associated factor 2 [Crassostrea gigas]
Length = 553
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEIN-RYF 334
LE+KI+ ++LK E + +K +G FWK+ + + E +
Sbjct: 368 LEKKIRALERSISLKDVALAEQELRIKTLELTTYDGTLFWKISEWSKRRSEAQSNQVTSL 427
Query: 335 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS FYSS GY+ C R+ + + ++S+F +++G D +L WPF R+ F L+
Sbjct: 428 YSPIFYSSKNGYKMCARLYPNGDGMGKNTHMSIFFVVMRGNFDALLQWPFSYRVTFMLLD 487
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+++ D + D N SFKRP A G FI +A + DP ++ ED F+
Sbjct: 488 QNNKEHQVDSFRPDPNSSSFKRPTTEM--NIASGCPLFIPLAKLDDPSLAYVKEDTMFI 544
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC-------PIDEK--VL 62
N D +F C+ C L+D + + CGH+FC +C++S I + C +DE+ +L
Sbjct: 36 NFDRKFLCNHCSLILRDPVQSYCGHRFCRSCMESIIRSHEQVRCQSCIEEGTMDEEYSIL 95
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLK 108
D +F DN RRE+ C C+ + +YE+HV C K
Sbjct: 96 KMDQMFPDNAVRREMGAMAAKCINPNCTWKGIFKQYEAHVAECKFK 141
>gi|341931969|gb|AEL04293.1| TNF receptor-associated factor 6, partial [Polychrus marmoratus]
Length = 213
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + NG++ WK+ +F LK +E +S
Sbjct: 74 METQNSQMGDLKRTIRNLEEKIIEMEAQQSNGIFLWKIEHFSVYLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H++QGE D L WPF G IR + L+ S
Sbjct: 134 FYTGRPGYKLCMRLHIQMPNAQRCANYISLFVHIMQGEYDSHLPWPFQGTIRLSILDQS 192
>gi|124295367|gb|ABN04151.1| tumor necrosis factor receptor-associated factor 2 [Branchiostoma
belcheri]
Length = 547
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 22/190 (11%)
Query: 271 ERMVLLEQ-SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
ER++ L+ ++ EQ +++ E+ +GV WK+ +F K + +
Sbjct: 370 ERIIALKDVALAEQDLRIQTLEMTSY--------------DGVLTWKIADFTRKRHDAIT 415
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
FYS CF++S GY+ C RV ++ + ++SLF +++G D +L WPF ++
Sbjct: 416 GKTASFYSPCFFTSRTGYKMCARVYLNGDGMGKGTHVSLFFVVMRGHYDGLLRWPFRQKV 475
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F ++ ++ ++TD + D SF+RP + A G F+ ++ + G++ +
Sbjct: 476 SFMLVDQNNRENVTDAFRPDPTSSSFQRPTSDM--NIASGCPLFVPLSQLESSSHGYV-K 532
Query: 446 DDTFVIKTQV 455
DDT +I+ V
Sbjct: 533 DDTMLIRVIV 542
>gi|22027622|ref|NP_004286.2| TNF receptor-associated factor 4 [Homo sapiens]
gi|30580636|sp|Q9BUZ4.1|TRAF4_HUMAN RecName: Full=TNF receptor-associated factor 4; AltName:
Full=Cysteine-rich domain associated with RING and Traf
domains protein 1; AltName: Full=Metastatic lymph node
gene 62 protein; Short=MLN 62; AltName: Full=RING finger
protein 83
gi|12804687|gb|AAH01769.1| TNF receptor-associated factor 4 [Homo sapiens]
gi|83699689|gb|ABC40750.1| TNF receptor-associated factor 4 [Homo sapiens]
gi|119571523|gb|EAW51138.1| TNF receptor-associated factor 4, isoform CRA_a [Homo sapiens]
gi|119571524|gb|EAW51139.1| TNF receptor-associated factor 4, isoform CRA_a [Homo sapiens]
gi|123986039|gb|ABM83751.1| TNF receptor-associated factor 4 [synthetic construct]
gi|123998962|gb|ABM87070.1| TNF receptor-associated factor 4 [synthetic construct]
gi|261861618|dbj|BAI47331.1| TNF receptor-associated factor 4 [synthetic construct]
gi|410219282|gb|JAA06860.1| TNF receptor-associated factor 4 [Pan troglodytes]
gi|410249664|gb|JAA12799.1| TNF receptor-associated factor 4 [Pan troglodytes]
gi|410288470|gb|JAA22835.1| TNF receptor-associated factor 4 [Pan troglodytes]
gi|410329693|gb|JAA33793.1| TNF receptor-associated factor 4 [Pan troglodytes]
Length = 470
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 188/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+N T SF + IP
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLN------------------TCSF---NVIP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCNTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|392936125|gb|AFM93127.1| TNF receptor-associated factor 6, partial [Alopoglossus angulatus]
Length = 213
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + + EE ++ + CNG++ W + NF LK +E +S
Sbjct: 74 MENQNTQMKDLKCTIHNLEEKIADIEAQQCNGIFIWNIENFGIYLKAQEEERPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H +QG+ D L WPF G I+ + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQSPNAQRCANYISLFVHTMQGDYDSHLPWPFQGTIKLSILDQS 192
>gi|291229560|ref|XP_002734739.1| PREDICTED: TNF receptor-associated factor 1-like [Saccoglossus
kowalevskii]
Length = 909
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 143/344 (41%), Gaps = 53/344 (15%)
Query: 161 PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQ------STNTPSHGRQ 214
PC + +VGC E+ + + + +H + HL+L+ +K + + + + P+ +
Sbjct: 564 PCLYQKVGCEELVEVEKM-PQHLETTVVKHLDLIRDKVSNVSDEFATLKVNLDVPALSQN 622
Query: 215 DTSNQKEIEAYLMKNKEHESKLWDPNKNQAGD----------DKSSEG-----------D 253
SN I ++ E L D Q G DK S D
Sbjct: 623 VKSNADRIVIVERAVQKVEQDLVDVTTRQQGQQPTRGVQAIIDKQSRSIEELKAKTIVLD 682
Query: 254 CSCKTCGDNSHLLKLVYERMVLLEQSM-------------LEQKIKVNNFELNLKQTEEI 300
T +L ER + Q+M LE+KIK + + LK
Sbjct: 683 TKVSTYEGIVAVLNGQIERDANVVQAMERERKQDRDLVESLERKIKSQDRIIALKDVALA 742
Query: 301 EDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNI 354
E ++ ++ +GV WK+ +F K + + YS CF++S GY+ C RV +
Sbjct: 743 EQDLRIQSLEMASYDGVLVWKISDFNRKRNDALSGRTTSIYSPCFFTSRHGYKMCARVYL 802
Query: 355 SRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSF 411
+ + ++SLF +++G D +L WPF ++ F L+ ++ + D + D +SF
Sbjct: 803 NGDGMGKGNHVSLFFVIMRGTFDGLLRWPFRQKVTFMLLDQNNREHVIDAFRPDPTSNSF 862
Query: 412 KRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
KRP A G F+ ++ L+ R ++DD+ IK V
Sbjct: 863 KRPTGDM--NIASGCPLFMPLSQ-LESSRHAYVKDDSMFIKVIV 903
>gi|61372388|gb|AAX43834.1| TNF receptor-associated factor 4 [synthetic construct]
Length = 471
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 188/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+N T SF + IP
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLN------------------TCSF---NVIP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCNTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|390344963|ref|XP_798706.3| PREDICTED: TNF receptor-associated factor 1-like
[Strongylocentrotus purpuratus]
Length = 410
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 310 NGVYFWKMYNFPAKLK-EMKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLF 365
+GVY WK+ N+ K + M + + YS F++S GY+ C RV + E A ++SLF
Sbjct: 258 SGVYLWKISNYSEKKRVAMNKSGKSIYSPPFFTSQHGYKLCGRVFLMGEGAGKGSHISLF 317
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF--SITDEIQSDKNFDSFKRPVNFFLNKKA 423
I ++G D +L WPF +I F +N SI + + D SFK+P +K
Sbjct: 318 ITTMKGPYDAMLPWPFKEKITFQLVNQDDPINKSIVEAFRPDPASSSFKKPT----TEKN 373
Query: 424 FGFNN--FIRVADVLDPGRGFLMEDDTFV-IKTQVTE 457
G F + + DP GF+ ++ ++ I +Q +E
Sbjct: 374 IGAGRPLFAEIKMIEDPKSGFIRDNTVYLKIISQTSE 410
>gi|308368774|gb|ADO30304.1| TNF receptor-associated factor 6 [Delma borea]
Length = 199
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 60 METQNTHMGNLKCTIRNLEERITEMEAQQCNGIFLWKIEHFSMYLKAQEEERPVVIHSPG 119
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLF+H ++GE D L WPF G IR + L+ S
Sbjct: 120 FYTGKPGYKLCLRLHIQLPNAPRCANYISLFVHTMKGEYDSHLPWPFQGTIRLSILDQS 178
>gi|149738082|ref|XP_001504769.1| PREDICTED: TNF receptor-associated factor 1 [Equus caballus]
Length = 415
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R++ L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVLELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F ++ ++ D + D N SF+RP + A G F ++ +
Sbjct: 336 LPWPFRNKVTFMLIDQNNREHAIDAFRPDLNSASFQRPQSE--TNVASGCPLFFPLSRLQ 393
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 394 SPKHAY-VKDDTMFLKCIV 411
>gi|126313917|ref|XP_001368795.1| PREDICTED: TNF receptor-associated factor 4 [Monodelphis domestica]
Length = 470
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/477 (19%), Positives = 185/477 (38%), Gaps = 75/477 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCAKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + C ++ + + H+++C N P
Sbjct: 74 AQVLSLPIRCIHSEEGCRWTGALRQLQVHLSSCGY-------------------NVVACP 114
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVG-CREVFKSQALLEKHYDLKTSFHL 191
N+ N K L+ P HL + C F + E F+S + +
Sbjct: 115 -NRCNGK-LSRRDLPSHLQHE-CPKRRLKCDFCGIDFTGEAFESHEGVCPQESVYCENKC 171
Query: 192 ELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSS 250
+ P + KE ++N +H+ + P NQ G
Sbjct: 172 GARMMRRLLGQHMMAECPKRTQPCAYCTKEFVYDTIQNHQHQCPRYPIPCPNQCGMGSIP 231
Query: 251 EGD--------CS----------------CKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
D CS C H+ + V + ++ + Q+ +
Sbjct: 232 REDLNSHLKENCSTVPVLCPFKDAGCKHRCPKLAMGRHMEESVKPHLAMMCALVSRQRQE 291
Query: 287 VNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFG 345
+ ++++ D V++ WK+ + +L+E K N +S FY+ +G
Sbjct: 292 LQELRRDVEELSVGCDGVLI--------WKIGGYGRRLQEAKARANHECFSPAFYTHKYG 343
Query: 346 YRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----S 397
Y+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 344 YKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPAVAKPQH 403
Query: 398 ITDEIQSDKNFDSFKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
+T+ D ++ +F++P + +++ A FG+ FI D+ R ++ +D F+
Sbjct: 404 VTETFHPDPHWKNFQKPGTWRGSMDESALGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|390345669|ref|XP_780297.2| PREDICTED: TNF receptor-associated factor 5-like
[Strongylocentrotus purpuratus]
Length = 481
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 102/471 (21%), Positives = 192/471 (40%), Gaps = 93/471 (19%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ ++ C++C + L+ + CGH+ C+AC+ + V + CP+D+ + +D +++D
Sbjct: 68 VNKKYLCTVCQQILRYPVQFEECGHRCCSACLPDLLRVSPR--CPLDQAPVARDKVYVDT 125
Query: 72 YTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNT 128
EI + ++ CP K C + E + H C Y++ P N
Sbjct: 126 AFGNEIGDLSVKCPNHDKGCPWTGVVKENKEHFAKCLYIEVECP--------------NI 171
Query: 129 SGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTS 188
G +KR F E + + C+F Q +++F + H + +
Sbjct: 172 CGAHFDKR---------FLESHLEEDCTKRMVQCEFCQ---KKIFFKDEI--AHMNACQN 217
Query: 189 FHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDK 248
F + C +G + T P + E++A++ K+ +SK+ P
Sbjct: 218 FPVP------CPNGCKLTEIP---------RGEVKAHIDKDCP-KSKIPCP--------- 252
Query: 249 SSEGDCS--CKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQ--------TE 298
SE C+ C+ H+ E + + ML+ K ++ + L Q +
Sbjct: 253 FSEFGCTYKCERQRMQKHITDDPTEHLTFVGNIMLKNKAQLQTHDDLLMQHKDSLGVCMQ 312
Query: 299 EIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRF---CTRVNI 354
++ D + KL WK+ + +++E K+ + +S F +S GYR C
Sbjct: 313 KVRD--LEKLYGSQLVWKIDKYAERMQEAKQGKKVTIFSPPFLTSRHGYRLSVSCCLNGD 370
Query: 355 SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSD-------KN 407
+ + ++S+F+ + +GE D +L WPF RI FT ++ + + I + +N
Sbjct: 371 GKAKSHFMSIFVCINRGEYDALLPWPFSHRITFTLIDQCQDPTARRNISYNIKPNPCKEN 430
Query: 408 FDSFKRPV---NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
RP+ N + F N I+ D + DDT IK QV
Sbjct: 431 KAFLGRPLGERNASFGTQKFVPLNMIKTLDYI--------RDDTMFIKVQV 473
>gi|390344965|ref|XP_796469.3| PREDICTED: TNF receptor-associated factor 1-like
[Strongylocentrotus purpuratus]
Length = 460
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 12/176 (6%)
Query: 293 NLKQTEEIEDNVVLKL---CNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRF 348
+L+Q E D +L L +GV+ WK+ N+ K ++ N + YS FY+S +GY+
Sbjct: 283 SLRQYGEKIDERLLTLETSYSGVFVWKIANYTEKKRDAMNTNVKSIYSPPFYTSQYGYKL 342
Query: 349 CTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF--SITDEIQ 403
C RV + + ++SLF+ +++G D +L WPF RI F +N SI + +
Sbjct: 343 CGRVFLMGDGVGKGTHISLFLTIMKGSFDAVLPWPFKERITFQLVNQDDPINKSIVEAFR 402
Query: 404 SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV-IKTQVTEM 458
D SFK+P G F ++ + DP GF+ ++ ++ I +Q +++
Sbjct: 403 PDPASSSFKKPTT--EKNIGAGCPLFAKIQIIEDPKSGFVRDNTVYLKIISQTSDV 456
>gi|426219619|ref|XP_004004016.1| PREDICTED: TNF receptor-associated factor 1 [Ovis aries]
Length = 415
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R++ L+Q++ ++ + E +L EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVLELQQTLAQKDQALGKLEQSLHLMEEAS-------YDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D N SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLNSASFQRPQSE--TNVASGCPLFFPLNKLQ 393
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 394 SPKHAY-VKDDTMFLKCVV 411
>gi|426348925|ref|XP_004042072.1| PREDICTED: TNF receptor-associated factor 4 [Gorilla gorilla
gorilla]
Length = 470
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 187/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + ++ CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSPCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+N T SF + IP
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLN------------------TCSF---NVIP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCNTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>gi|16444910|emb|CAC82653.1| tumor necrosis factor receptor associate factor-2 [Carassius
auratus]
Length = 501
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 173/457 (37%), Gaps = 70/457 (15%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC------PIDEKVLTK 64
++++P+++C C E L+ CGH+FC C + G C I E+ ++
Sbjct: 37 VSMEPKYQCQQCKEILRKPFQAQCGHRFCVFCFKQ-LTSSGPIPCEACRAEGIFEEAMSM 95
Query: 65 DDI---FIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITD 119
+I F DN RREI CP CS ++ +YE H C + + + + +
Sbjct: 96 LNITVAFPDNAARREIDSLPAKCPNDGCSWSGTLKDYEGQHEGRCDFERVKCEACQAVIL 155
Query: 120 SPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFP------------------ 161
N N K VT + + + FP
Sbjct: 156 LSEKDRHNERECEARTLNCKYCKVTFNFKEIKAHDEICQKFPMQCKDCGKKKIPREKFQE 215
Query: 162 -----------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
C+F ++GCR V + ++H HL L+ + S +
Sbjct: 216 HTKSCAKSKSACQFSEIGCRAVVDN-GKQQEHEQTSVMEHLRLMLSVL-----SSVRLRA 269
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWDP--NKNQAGDDKSSEGDCSCK--TCGDNSHLL 266
G + + Y + N + G + + + C N +
Sbjct: 270 EGAGEWQEDSGLGLYRGPEDAPPAGPNAAAHNAGRGGGPGVQQKVTALENIVCVLNREVE 329
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTE-----------EIEDNVV-LKLC--NGV 312
+ L Q L+Q+ K+ N ++Q E E E ++ L+ C +GV
Sbjct: 330 RSALTLEALSRQHRLDQE-KIENLSNKVRQLERTLTMRDLQLAESEQSLRELQFCTYDGV 388
Query: 313 YFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
+ WK+ +F + ++ + +S FYSS +GY+ C R+ ++ + +LSLF +
Sbjct: 389 FIWKIADFSRRRQDAVGGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVV 448
Query: 369 VQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSD 405
++G+ D +L WPF ++ L+ ++ I D + D
Sbjct: 449 MRGKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPD 485
>gi|74203048|dbj|BAE26224.1| unnamed protein product [Mus musculus]
Length = 409
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ +
Sbjct: 218 DREHILSL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITSV 269
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 270 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 329
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 330 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 387
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 388 SPKHAY-VKDDTMFLKCIV 405
>gi|341931913|gb|AEL04265.1| TNF receptor-associated factor 6, partial [Calotes emma]
Length = 213
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLS 363
CNG++ W++ NF L+ +E + +S FY+ GY+ C R++I + Q Y+S
Sbjct: 103 CNGIFIWRIENFSIYLRAQEEERQVVIHSPGFYTGKPGYKLCMRLHIQVPNGQRSSNYMS 162
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTS 393
LF+H++QG D L WPF G IR + L+ S
Sbjct: 163 LFVHIMQGNYDSHLPWPFQGTIRLSVLDQS 192
>gi|363740588|ref|XP_415406.3| PREDICTED: TNF receptor-associated factor 1 [Gallus gallus]
Length = 535
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ + KL++ + YS FY++ +GY+ C R+ ++ + ++SLF
Sbjct: 386 DGVFLWKITDVNQKLQDSVTGRVVSLYSPAFYTAKYGYKVCLRIYLNGDGMGKGTHVSLF 445
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+++G+ D +L WPF ++ F L+ ++ I D + D SF+RPVN A G
Sbjct: 446 FVVMKGDYDALLPWPFRHKVTFMLLDQNNREHIIDAFRPDLASASFQRPVNDM--NVASG 503
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFV 450
F+ + + P ++ ED F+
Sbjct: 504 CPTFLPLTKLQSPKHAYVKEDTLFL 528
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK------------- 60
+ ++ CS C LK A+ T CGH++C+AC+ SWI KN P+ +K
Sbjct: 36 EQKYLCSNCNNVLKKALQTLCGHRYCSACL-SWIVRNNKN--PVCQKCKEEDPSTLSEGS 92
Query: 61 VLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+L ++ F D +EI E + C CS ++ +E H C
Sbjct: 93 LLAEERAFGDAAINKEISELRVHCVTLGCSWCGTMKNFEEHQILC 137
>gi|390370667|ref|XP_003731866.1| PREDICTED: TNF receptor-associated factor 1-like, partial
[Strongylocentrotus purpuratus]
Length = 412
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%)
Query: 293 NLKQTEEIEDNVVLKL---CNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRF 348
+L+Q E D +L L +GV+ WK+ N+ K ++ N + YS FY+S +GY+
Sbjct: 235 SLRQYGEKIDERLLTLETSYSGVFVWKIANYTEKKRDAMNTNVKSIYSPPFYTSQYGYKL 294
Query: 349 CTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF--SITDEIQ 403
C RV + + ++SLF+ +++G D +L WPF RI F +N SI + +
Sbjct: 295 CGRVFLMGDGVGKGTHISLFLTIMKGSFDAVLPWPFKERITFQLVNQDDPINKSIVEAFR 354
Query: 404 SDKNFDSFKRPVNFFLNKKAFGFN--NFIRVADVLDPGRGFLMEDDTFV-IKTQVTEM 458
D SFK+P +K G F ++ + DP GF+ ++ ++ I +Q +++
Sbjct: 355 PDPASSSFKKPT----TEKNIGAGCPLFAKIQIIEDPKSGFVRDNTVYLKIISQTSDV 408
>gi|114626397|ref|XP_001158357.1| PREDICTED: TNF receptor-associated factor 1 isoform 3 [Pan
troglodytes]
Length = 416
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 19/205 (9%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGEND 374
+ E + I+ +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D
Sbjct: 277 TRRCHESACGRTIS--LFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYD 334
Query: 375 DILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVAD 434
+L WPF ++ F L+ ++ D + D + SF+RP + A G F+ ++
Sbjct: 335 ALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFLPLSK 392
Query: 435 VLDPGRGFLMEDDTFVIKTQVTEMT 459
+ P + ++DDT +K V T
Sbjct: 393 LQSPKHAY-VKDDTMFLKCIVETST 416
>gi|170716428|gb|ACB31916.1| TNF receptor-associated factor 6 [Agama agama]
Length = 200
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLS 363
CNG++ WK+ NF L+ +E + +S FY+ GY+ C R++I + Q Y+S
Sbjct: 90 CNGIFIWKIENFSIYLRAQEEKRQVVIHSPGFYTGKPGYKLCLRLHIQVPNTQRCASYIS 149
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTS 393
LF+H++QG+ D L WPF G IR + L+ S
Sbjct: 150 LFVHIMQGDYDSHLPWPFQGTIRLSILDQS 179
>gi|410978971|ref|XP_003995860.1| PREDICTED: TNF receptor-associated factor 1 [Felis catus]
Length = 415
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVVMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNRLQ 393
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 394 SPRHAY-VKDDTMFLKCIV 411
>gi|392936127|gb|AFM93128.1| TNF receptor-associated factor 6, partial [Bipes biporus]
Length = 211
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q +V + + ++ E + + CNG++ WK+ N LK +E
Sbjct: 68 LTAKMETQNSQVGDLKRTIRTLEGKMAEMEAQQCNGIFLWKIENVSIYLKAQEEERPVVI 127
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H++QG+ D L WPF G IR + L
Sbjct: 128 HSPGFYTGRPGYKLCLRLHLQLPTAQRCANYISLFVHIMQGDYDSHLPWPFQGTIRLSIL 187
Query: 391 NTS 393
+ S
Sbjct: 188 DQS 190
>gi|170716438|gb|ACB31921.1| TNF receptor-associated factor 6 [Xantusia vigilis]
Length = 211
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + + + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 72 METQNTHIGDLKRVIQNLEEKMVEMEAQQCNGIFIWKIENFSVYLKAQEEEKPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLF+H +QG D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPNAPRCANYISLFVHTMQGNYDSHLPWPFQGTIRLSILDQS 190
>gi|193785185|dbj|BAG54338.1| unnamed protein product [Homo sapiens]
Length = 226
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+ +LE+ + +N + L + EE + NG WK+ ++ K +E +
Sbjct: 33 QRLAVLEEETNKHDTHINIHKAQLSKNEERFKLLEGTCYNGKLIWKVTDYKMKKREAVDG 92
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 93 HTVSIFSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRVT 152
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRP---VNFFLNKKAFGFNNFIRVADVLDPGRGFL 443
L+ S + +I + + D N SFKRP +N A G F+ VL+ +
Sbjct: 153 LMLLDQSGKKNIMETFKPDPNSSSFKRPDGEMNI-----ASGCPRFV-AHSVLENAKNAY 206
Query: 444 MEDDTFVIKTQV 455
++DDT +K V
Sbjct: 207 IKDDTLFLKVAV 218
>gi|308368786|gb|ADO30310.1| TNF receptor-associated factor 6 [Lepidophyma flavimaculatum]
Length = 213
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + + + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 74 METQNTHIGDLKRVIQNLEEKMVEMEAQQCNGIFIWKIENFSVYLKAQEEEKPVVIHSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLF+H +QG D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPNAPRCANYISLFVHTMQGNYDSHLPWPFQGTIRLSILDQS 192
>gi|431900768|gb|ELK08209.1| TNF receptor-associated factor 1 [Pteropus alecto]
Length = 415
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+ ++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVVELQHTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMKGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 336 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSRLQ 393
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 394 SPKHAY-VKDDTMFLKCIV 411
>gi|194475176|gb|ACF74539.1| TNF receptor-associated factor 1 [Cervus elaphus]
Length = 210
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 12/158 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L+L +R++ L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 47 DREHILRL-EQRVLELQQTLAQKDQALGKLEQSLRLMEEAS-------YDGTFLWKITNV 98
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ +E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 99 SRRCQESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 158
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRP 414
L WPF ++ F L+ ++ D + D N SF+RP
Sbjct: 159 LSWPFRNKVTFMLLDQNNREHAIDAFRPDLNSASFQRP 196
>gi|149708636|ref|XP_001489899.1| PREDICTED: TNF receptor-associated factor 5 [Equus caballus]
Length = 558
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + + +N + L + EE + NG WK+ ++ K
Sbjct: 358 LLETHDQRIVVLEGETNKHDVHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKK 417
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E E + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 418 REALEGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 477
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + I + ++D N SFKRP A G F+ L+
Sbjct: 478 FRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLENA 534
Query: 440 RGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 535 KNTYIKDDTIFLKVAV 550
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDS 120
+RE+L + C C++++ + Y+ H+ C + Q S E +S
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRYQDHLQQCLFQAVQCSNEHCQES 147
>gi|392352933|ref|XP_003751350.1| PREDICTED: TNF receptor-associated factor 5-like [Rattus
norvegicus]
Length = 586
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+V+LE + +N + L + EE + +G WK+ ++ AK +E E
Sbjct: 392 QRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYSGKLIWKVTDYKAKKREAMEG 451
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 452 HTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVT 511
Query: 387 FTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ S + + I + ++D N SF+RP A G F+ L+ R ++
Sbjct: 512 LMLLDQSGKKNHIVETFKADPNSSSFRRPDGEM--NIASGCPRFVS-HSTLESSRNTYIK 568
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 569 DDTLFLKVAV 578
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 38 QLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNSVPICPVDKEVIKPQEVFKDN 97
Query: 72 YTRREILENNLTCP-YKQCSSQLSIPEYESHVNTC 105
+RE+L ++ C C++++ + ++ H+ C
Sbjct: 98 CCKREVLNLHVYCKNAPGCNARIILGRFQDHLQHC 132
>gi|392332918|ref|XP_003752735.1| PREDICTED: TNF receptor-associated factor 5-like [Rattus
norvegicus]
Length = 558
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+V+LE + +N + L + EE + +G WK+ ++ AK +E E
Sbjct: 364 QRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYSGKLIWKVTDYKAKKREAMEG 423
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 424 HTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVT 483
Query: 387 FTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ S + + I + ++D N SF+RP A G F+ L+ R ++
Sbjct: 484 LMLLDQSGKKNHIVETFKADPNSSSFRRPDGEM--NIASGCPRFVS-HSTLESSRNTYIK 540
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 541 DDTLFLKVAV 550
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 38 QLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNSVPICPVDKEVIKPQEVFKDN 97
Query: 72 YTRREILENNLTCP-YKQCSSQLSIPEYESHVNTC 105
+RE+L ++ C C++++ + ++ H+ C
Sbjct: 98 CCKREVLNLHVYCKNAPGCNARIILGRFQDHLQHC 132
>gi|392936101|gb|AFM93115.1| TNF receptor-associated factor 6, partial [Aeluroscalabotes
felinus]
Length = 152
Score = 74.7 bits (182), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ NF LK +E +S
Sbjct: 23 METQNTHMGNLKRTIRNLEEKITEMEAQQCNGIFIWKIENFSIYLKAQEEERPVVIHSPG 82
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +AQ Y+SLF+H + G+ D L WPF G IR + L+ S
Sbjct: 83 FYTGKPGYKLCLRLHIQLPNAQRCANYISLFVHTMLGQYDSHLPWPFQGTIRLSILDQS 141
>gi|334322068|ref|XP_001374168.2| PREDICTED: TNF receptor-associated factor 5 [Monodelphis domestica]
Length = 560
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V LE + +N + L + EE + NG WK+ ++ K
Sbjct: 360 LLETYDQRLVTLEGQTNRHDVHINVHKAQLNKNEERFKMLEGTCYNGKLIWKVTDYKMKK 419
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
KE E +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 420 KEATEGRTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMKGEFDSLLQWP 479
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + IT+ ++D N SFKRP A G F+ L+
Sbjct: 480 FKQRVTMMLLDQSGKKNHITEIFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLEST 536
Query: 440 RGFLMEDDTFVIKTQV 455
+ +++DT +K V
Sbjct: 537 KNTYIKEDTLFMKVVV 552
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ + CP+D++++ ++F DN
Sbjct: 41 LEERYKCASCHSVLHNPHQTGCGHRFCENCILSLRELNTVSICPVDKEIIKPKEVFKDNC 100
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVE 115
+RE+L + C C++++ + Y+ H+ C + Q S E
Sbjct: 101 CKREVLNLQVFCKNAPHCAAKMILGRYQDHLLQCLFQSVQCSNE 144
>gi|355725847|gb|AES08683.1| TNF receptor-associated factor 1 [Mustela putorius furo]
Length = 413
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R++ L+Q++ ++ + E L+ EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVLELQQTLAQKDQALGKLEQGLRLMEEAS-------FDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNRLQ 393
Query: 437 DPGRGFLMEDDTFVIK 452
P + ++DDT +K
Sbjct: 394 SPKHAY-VKDDTMFLK 408
>gi|354506066|ref|XP_003515087.1| PREDICTED: TNF receptor-associated factor 1-like, partial
[Cricetulus griseus]
Length = 318
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 14/186 (7%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKE 329
+R+V L+Q++ ++ + E +L+ EE +G + WK+ N + E M
Sbjct: 136 QRVVELQQTLAQKDQVLGKLEQSLRLMEEAS-------FDGTFLWKITNVTRRCHESMCG 188
Query: 330 INRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +L WPF ++
Sbjct: 189 RTASLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVT 248
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
F L+ ++ D + D + SF+RP + A G F ++ + P + ++D
Sbjct: 249 FMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQSPKHAY-VKD 305
Query: 447 DTFVIK 452
DT +K
Sbjct: 306 DTMFLK 311
>gi|395531313|ref|XP_003767726.1| PREDICTED: TNF receptor-associated factor 5 [Sarcophilus harrisii]
Length = 745
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V LE + +N + L + EE + NG WK+ ++ K
Sbjct: 545 LLETYDQRLVTLEDQTNRHDVHINVHKAQLNKNEERFKMLEGTCYNGKLIWKVTDYRMKK 604
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E E +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 605 REATEGRTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMKGEFDSLLQWP 664
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + IT+ ++D N SFKRP A G F+ +L+
Sbjct: 665 FKQRVTMMLLDQSGKKNHITEIFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSILENS 721
Query: 440 RGFLMEDDTFVIKTQV 455
+ +++DT +K V
Sbjct: 722 KNTYIKEDTLFMKVVV 737
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ + CP+D++++ ++F DN
Sbjct: 226 LEERYKCAKCHSVLHNPHQTGCGHRFCENCILSLRELNAVSICPVDKEIIKLQEVFKDNC 285
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVE 115
+RE+L + C QC++++ + Y+ H+ C + Q S E
Sbjct: 286 CKREVLNLQVFCKNAPQCAAKIILGRYQDHLLQCLFQSVQCSNE 329
>gi|426362885|ref|XP_004048581.1| PREDICTED: TNF receptor-associated factor 1 [Gorilla gorilla
gorilla]
Length = 416
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 277 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 336
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 337 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 394
Query: 437 DPGRGFLMEDDTFVIKTQVTEMT 459
P + ++DDT +K V T
Sbjct: 395 SPKHAY-VKDDTMFLKCIVETST 416
>gi|308368776|gb|ADO30305.1| TNF receptor-associated factor 6 [Lialis burtonis]
Length = 213
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q + N + ++ EE + + CNG++ WK+ +F LK +E S
Sbjct: 74 METQNTHMGNLKRTIRNLEERITEMEAQQCNGIFIWKIEHFSMYLKAQEEERPVVIXSPG 133
Query: 339 FYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I +A Y+SLF+H ++GE D L WPF G IR + L+ S
Sbjct: 134 FYTGKPGYKLCLRLHIQLPNAPRCANYISLFVHTMKGEYDSHLPWPFQGTIRLSILDQS 192
>gi|397526467|ref|XP_003833145.1| PREDICTED: TNF receptor-associated factor 1 [Pan paniscus]
gi|410352407|gb|JAA42807.1| TNF receptor-associated factor 1 [Pan troglodytes]
Length = 416
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGEND 374
+ E + I+ +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D
Sbjct: 277 TRRCHESACGRTIS--LFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYD 334
Query: 375 DILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVAD 434
+L WPF ++ F L+ ++ D + D + SF+RP + A G F ++
Sbjct: 335 ALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSK 392
Query: 435 VLDPGRGFLMEDDTFVIKTQVTEMT 459
+ P + ++DDT +K V T
Sbjct: 393 LQSPKHAY-VKDDTMFLKCIVETST 416
>gi|348515511|ref|XP_003445283.1| PREDICTED: TNF receptor-associated factor 2-like [Oreochromis
niloticus]
Length = 516
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 263 SHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPA 322
+H +L E++ L + + + + +L L +TE++ + +G++ WK+ +F
Sbjct: 319 AHQHRLDQEKIENLSNKVRQLERTLTMRDLQLSETEQLVRELQFCTYDGIFVWKISDFSR 378
Query: 323 KLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILD 378
+ ++ + +S FYSS +GY+ C R+ ++ + +LSLF +++G D +L
Sbjct: 379 RRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRGRCDALLK 438
Query: 379 WPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
WPF ++ L+ ++ I D + D + SF+RP++ A G F +A +
Sbjct: 439 WPFSQKVTLMLLDQNNREHIIDAFRPDVSSSSFQRPISEM--NIASGCPLFCPLAKL--A 494
Query: 439 GRGFLMEDDTFVIKTQV 455
G+ + DDT IK V
Sbjct: 495 GKSPYLRDDTIFIKAIV 511
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGK--NYCPIDE--- 59
P++ + ++ +++C CL+ L+ + CGH+FC C K C +E
Sbjct: 16 PLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSSGPKPCEACRQEEIYE 75
Query: 60 ---KVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
+L + F DN REI C + C+ SI EYE+ H C
Sbjct: 76 EPISILNSSEAFPDNAAGREIASLPARCLNQGCNWTGSIKEYEAQHEGRC 125
>gi|281485956|gb|ADA70539.1| TNF receptor-associated factor 6 [Sceloporus spinosus
caeruleopunctatus]
Length = 184
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLQRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 184
>gi|5032193|ref|NP_005649.1| TNF receptor-associated factor 1 isoform a [Homo sapiens]
gi|300193045|ref|NP_001177874.1| TNF receptor-associated factor 1 isoform a [Homo sapiens]
gi|6707734|sp|Q13077.1|TRAF1_HUMAN RecName: Full=TNF receptor-associated factor 1; AltName:
Full=Epstein-Barr virus-induced protein 6
gi|675462|gb|AAA62309.1| Epstein-Barr virus-induced protein [Homo sapiens]
gi|18848177|gb|AAH24145.1| TNF receptor-associated factor 1 [Homo sapiens]
gi|52545757|emb|CAH56343.1| hypothetical protein [Homo sapiens]
gi|54695686|gb|AAV38215.1| TNF receptor-associated factor 1 [Homo sapiens]
gi|61356766|gb|AAX41282.1| TNF receptor-associated factor 1 [synthetic construct]
gi|119607885|gb|EAW87479.1| TNF receptor-associated factor 1 [Homo sapiens]
gi|189067922|dbj|BAG37860.1| unnamed protein product [Homo sapiens]
gi|307685451|dbj|BAJ20656.1| TNF receptor-associated factor 1 [synthetic construct]
gi|312151446|gb|ADQ32235.1| TNF receptor-associated factor 1 [synthetic construct]
Length = 416
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 277 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 336
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 337 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 394
Query: 437 DPGRGFLMEDDTFVIKTQVTEMT 459
P + ++DDT +K V T
Sbjct: 395 SPKHAY-VKDDTMFLKCIVETST 416
>gi|332229886|ref|XP_003264117.1| PREDICTED: TNF receptor-associated factor 1 isoform 1 [Nomascus
leucogenys]
Length = 416
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDD 375
+ E R +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D
Sbjct: 277 TRRCHE-SACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDA 335
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
+L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 336 LLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKL 393
Query: 436 LDPGRGFLMEDDTFVIKTQVTEMT 459
P + ++DDT +K V T
Sbjct: 394 QSPKHAY-VKDDTMFLKCIVETST 416
>gi|281485960|gb|ADA70541.1| TNF receptor-associated factor 6 [Sceloporus undulatus cowlesi]
Length = 184
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLSWPFQGTIRL 184
>gi|281485978|gb|ADA70550.1| TNF receptor-associated factor 6 [Uta stansburiana]
Length = 181
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 69 METQNSQMGDLKRTIRNLEEKITEMQAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 128
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 129 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 181
>gi|149038936|gb|EDL93156.1| rCG45902 [Rattus norvegicus]
Length = 278
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 87 DREHVLNL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 138
Query: 321 PAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGEND 374
+ E + ++ +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D
Sbjct: 139 TKRCHESVCGRTVS--LFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYD 196
Query: 375 DILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVAD 434
+L WPF ++ F L+ ++ D + D + SF+RP + A G F ++
Sbjct: 197 ALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSK 254
Query: 435 VLDPGRGFLMEDDTFVIK 452
+ P + ++DDT +K
Sbjct: 255 LQSPKHAY-VKDDTMFLK 271
>gi|30580619|sp|P70191.1|TRAF5_MOUSE RecName: Full=TNF receptor-associated factor 5
gi|1549146|dbj|BAA11942.1| TRAF5 [Mus musculus]
gi|15215207|gb|AAH12702.1| TNF receptor-associated factor 5 [Mus musculus]
gi|74194859|dbj|BAE26019.1| unnamed protein product [Mus musculus]
gi|148681024|gb|EDL12971.1| Tnf receptor-associated factor 5 [Mus musculus]
Length = 558
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+VLLE + +N + L + EE + +G WK+ ++ K +E E
Sbjct: 364 QRLVLLEGETSKHDAHINIHKAQLNKNEERFKQLEGACYSGKLIWKVTDYRVKKREAVEG 423
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 424 HTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVT 483
Query: 387 FTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ S + + I + ++D N SFKRP A G F+ L+ + ++
Sbjct: 484 LMLLDQSGKKNHIVETFKADPNSSSFKRPDGEM--NIASGCPRFVS-HSTLENSKNTYIK 540
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 541 DDTLFLKVAV 550
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQQCIRSLRELNSVPICPVDKEVIKPQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTC 105
+RE+L ++ C C++++ + ++ H+ C
Sbjct: 99 CKREVLNLHVYCKNAPGCNARIILGRFQDHLQHC 132
>gi|443727073|gb|ELU13993.1| hypothetical protein CAPTEDRAFT_159010 [Capitella teleta]
Length = 476
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 159/397 (40%), Gaps = 53/397 (13%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L+ FEC +C +++ + CGH+ C+ C+ + V + CPID++ + KD IF+D
Sbjct: 63 LEKCFECPVCCRLMRNPVQFQECGHRCCSTCVPELLRVVPR--CPIDQRFIDKDKIFVDK 120
Query: 72 YTRREILENNLTCPY--KQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
+RE+ + C + K CS + E H+ C D T +
Sbjct: 121 IFQRELDGVKVKCCHHEKGCSWTSAYRELTGHLLCC-------------DYATITCPKGC 167
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
I +R HL + N + C++ C E + + H+D F
Sbjct: 168 RIEFQRR--------FINPHLR-EDCPNRDDSCRY----CYEPL-MRGNEDVHFDRCAEF 213
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
+ C++G TN P + KE + ++ E+K D +
Sbjct: 214 PVA------CANGCGRTNIP-RSKMKQHLDKECQLQVVPCPFVEAKC---------DHRC 257
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC 309
G S L+L + + +L QS+ Q V+ + E+ D + KL
Sbjct: 258 ERGRMSQHIRDQADRHLELAGQSLQILFQSVAIQTRAVDKCSSRITAIEDRVDGLE-KLY 316
Query: 310 NGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
WK+ + K ++ K + +S F +S GY+ ++ + +++S+F
Sbjct: 317 GAQLVWKIDGYDEKYQDAKTGRKSTIFSPPFLTSRHGYKMILSASLFGDGKGKGEHMSVF 376
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEI 402
L +G+ D +L WPF R+ FT ++ + + ++
Sbjct: 377 ACLCRGDYDALLVWPFCHRLTFTLIDQCPDSATRHDV 413
>gi|291240925|ref|XP_002740366.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 577
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 30/312 (9%)
Query: 160 FPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTS-- 217
PC + +GC ++ L+ H + H E L Y HG + S
Sbjct: 274 LPCSYKVIGCNAQMQAGDLIS-HLETGILDHQEYLLQAY---------LKIHGFVEDSKK 323
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS-----SEGDCSCKTCGDNSHLLKLVYER 272
++K ++ K + E +L +K +K GD T D S K ++
Sbjct: 324 DKKAMQQLFAKFEAQEKELDKISKRCMKLEKDIANMLKHGDQGGAT-HDKSVDAKREKQQ 382
Query: 273 MVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKE- 326
++ E +KIK + + LK E ++ ++ +GV WK+ +F K +
Sbjct: 383 RLIEELKNKRRKIKSQDRIIALKDVALAEQDLRIQSLELASYDGVLVWKITDFNRKRNDA 442
Query: 327 MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVG 383
+ YS CF++SC GY+ C RV ++ + ++SLF +++G D +L WPF
Sbjct: 443 LSGRTTSIYSPCFFTSCHGYKMCARVYLNGDGMGKGNHVSLFFVIMRGSFDGLLRWPFRQ 502
Query: 384 RIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFL 443
++ F L+ ++ + D + D +SFK+P A G F+ + L+ R
Sbjct: 503 KVTFMLLDQNNREHVIDAFRPDPTSNSFKKPTGDM--NIASGCPLFMPLGQ-LESSRHAY 559
Query: 444 MEDDTFVIKTQV 455
++DD IK V
Sbjct: 560 VKDDCLFIKVIV 571
>gi|281485950|gb|ADA70536.1| TNF receptor-associated factor 6 [Sceloporus pyrocephalus]
Length = 183
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 71 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 130
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 131 FYTGKPGYKLCMRLHIQLPNTARCANYISLFVHIMQGEYDSHLPWPFQGTIRL 183
>gi|281485968|gb|ADA70545.1| TNF receptor-associated factor 6 [Urosaurus bicarinatus]
Length = 184
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLSWPFQGTIRL 184
>gi|281485912|gb|ADA70517.1| TNF receptor-associated factor 6 [Petrosaurus thalassinus]
Length = 181
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 69 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 128
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 129 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 181
>gi|281485964|gb|ADA70543.1| TNF receptor-associated factor 6 [Sceloporus variabilis marmoratus]
Length = 184
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNCQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 184
>gi|281337713|gb|EFB13297.1| hypothetical protein PANDA_004044 [Ailuropoda melanoleuca]
Length = 414
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L++++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVVELQETLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ + D + D + SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNHREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNRLQ 393
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 394 SPKHAY-VKDDTMFLKCIV 411
>gi|296190701|ref|XP_002743306.1| PREDICTED: TNF receptor-associated factor 1 [Callithrix jacchus]
Length = 416
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H +L ER+V LEQ ++E + + + L + E+ + +G + WK+ N +
Sbjct: 220 HQSQLDRERIVNLEQRVMELQRTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRR 279
Query: 324 LKEM---KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDIL 377
+E K ++ +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L
Sbjct: 280 CQESACGKTVS--LFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALL 337
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLD 437
WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 338 PWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQS 395
Query: 438 PGRGFLMEDDTFV 450
P ++ +D F+
Sbjct: 396 PKHAYVRDDTMFL 408
>gi|344252705|gb|EGW08809.1| TNF receptor-associated factor 1 [Cricetulus griseus]
Length = 298
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 14/186 (7%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKE 329
+R+V L+Q++ ++ + E +L+ EE +G + WK+ N + E M
Sbjct: 116 QRVVELQQTLAQKDQVLGKLEQSLRLMEEAS-------FDGTFLWKITNVTRRCHESMCG 168
Query: 330 INRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +L WPF ++
Sbjct: 169 RTASLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVT 228
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
F L+ ++ D + D + SF+RP + A G F ++ + P + ++D
Sbjct: 229 FMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQSPKHAY-VKD 285
Query: 447 DTFVIK 452
DT +K
Sbjct: 286 DTMFLK 291
>gi|301760434|ref|XP_002916012.1| PREDICTED: TNF receptor-associated factor 1-like [Ailuropoda
melanoleuca]
Length = 415
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L++++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DREHILSL-EQRVVELQETLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ + D + D + SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNHREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNRLQ 393
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 394 SPKHAY-VKDDTMFLKCIV 411
>gi|72110249|ref|XP_785064.1| PREDICTED: TNF receptor-associated factor 3-like
[Strongylocentrotus purpuratus]
Length = 302
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ N+ K K+ + N + S FY+S +GY+ C RV + + Y+SLF
Sbjct: 145 NGVCVWKIANYNEKKKDAMKTNVKSICSPPFYTSQYGYKLCGRVFLMGDGVGKGTYISLF 204
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF--SITDEIQSDKNFDSFKRPVNFFLNKKA 423
+ +++G D +L WPF RI F +N SI + + D SFK+P
Sbjct: 205 LTIMKGSFDAVLPWPFKERITFQLVNQDDSINKSIVEAFRPDPASSSFKKPTT--EKNIG 262
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
G F ++ + DP GF+ D+T +K
Sbjct: 263 AGCPLFAKIQIIEDPKSGFI-RDNTMYLK 290
>gi|403266085|ref|XP_003925227.1| PREDICTED: TNF receptor-associated factor 1 [Saimiri boliviensis
boliviensis]
Length = 416
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H +L ER+V LEQ ++E + + + L + E+ + +G + WK+ N +
Sbjct: 220 HQSQLDRERIVSLEQRVVELQRTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRR 279
Query: 324 LKEM---KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDIL 377
+E K ++ +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L
Sbjct: 280 CQESACGKTVS--LFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALL 337
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLD 437
WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 338 PWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQS 395
Query: 438 PGRGFLMEDDTFV 450
P ++ +D F+
Sbjct: 396 PKHAYVRDDTMFL 408
>gi|281485924|gb|ADA70523.1| TNF receptor-associated factor 6 [Sceloporus couchii]
Length = 184
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNCQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKTQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 184
>gi|281485970|gb|ADA70546.1| TNF receptor-associated factor 6 [Urosaurus graciosus]
Length = 174
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 62 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKTQEEERPVVIHSPG 121
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 122 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLSWPFQGTIRL 174
>gi|281485920|gb|ADA70521.1| TNF receptor-associated factor 6 [Sceloporus angustus]
Length = 184
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 184
>gi|281485972|gb|ADA70547.1| TNF receptor-associated factor 6 [Urosaurus nigricaudus]
Length = 184
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKTQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 184
>gi|281485946|gb|ADA70534.1| TNF receptor-associated factor 6 [Sceloporus parvus]
Length = 180
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 68 METQNCQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKTQEEERPVVIHSPG 127
Query: 339 FYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I +A Y+SLF+H++QGE D L WPF G IR
Sbjct: 128 FYTGKPGYKLCMRLHIQLPNAPRCANYISLFVHIMQGEYDSHLPWPFQGTIRL 180
>gi|197098988|ref|NP_001125751.1| TNF receptor-associated factor 1 [Pongo abelii]
gi|55729058|emb|CAH91266.1| hypothetical protein [Pongo abelii]
Length = 416
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 7/200 (3%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H +L ER++ LEQ ++E + + + L + E+ + +G + WK+ N +
Sbjct: 220 HQSQLDRERILSLEQRVVEPQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRR 279
Query: 324 LKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDW 379
E +S FY++ +GY+ C R+ ++ + +LSLFI L++GE D +L W
Sbjct: 280 CHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVLMRGEYDALLPW 339
Query: 380 PFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
PF ++ F L+ ++ D + D + SF+RP + A G F ++ + P
Sbjct: 340 PFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQSPK 397
Query: 440 RGFLMEDDTFVIKTQVTEMT 459
+ ++DDT +K V T
Sbjct: 398 HAY-VKDDTMFLKCIVETST 416
>gi|170716436|gb|ACB31920.1| TNF receptor-associated factor 6 [Aspidoscelis tigris]
Length = 211
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE CNG++ WK+ NF LK +E +S
Sbjct: 72 MENQNTQMRDLKRTIQNLEEKIAEAEAHQCNGIFIWKIENFSIYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+ GY+ C R++I Y+SLF+H +QG+ D L WPF G IR + L+ S
Sbjct: 132 FYTGKPGYKLCLRLHIQLPTTPHCGNYISLFVHTMQGDYDSHLPWPFQGTIRLSILDQS 190
>gi|47228423|emb|CAG05243.1| unnamed protein product [Tetraodon nigroviridis]
Length = 624
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 113/242 (46%), Gaps = 18/242 (7%)
Query: 220 KEIE--AYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLE 277
+E+E A M+ + KL D +K +A +K G LV ++ LE
Sbjct: 390 REVERFATTMEASNRQHKL-DQDKIEALSNKVGPWQTPAGVSGAARPPDALVVPQVRQLE 448
Query: 278 QSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYS 336
+++ + + V E L++ +GV+ W++ +F K ++ + +S
Sbjct: 449 RTVGLKDLTVAEMEGRLREMSAT-------TFDGVFVWRISDFAKKRQDAIAGRAPAMFS 501
Query: 337 ACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
FY+S +GY+ C R+ ++ + +LSLF +++G++D +L WPF ++ L+ S
Sbjct: 502 PAFYTSKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGQSDALLKWPFNQKVTLMLLDQS 561
Query: 394 SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKT 453
+ I D + D SF+RPV+ A G F ++ LD G+ + DDT IK
Sbjct: 562 NREHIIDAFRPDVTSSSFQRPVSEM--NIASGCPLFCPLSK-LD-GKNSYIRDDTIFIKA 617
Query: 454 QV 455
V
Sbjct: 618 IV 619
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 12/115 (10%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ + C+ C L+ CGH+FC+ C + G C I E +L
Sbjct: 28 LEDKHLCNCCHNILRRPFQAQCGHRFCSYCFTRTVS-NGPQKCSACIKEDIFEDPTSILK 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYE-SHVNTC-YLKYSQPSVED 116
+ F DN RRE+ C + C+ + +I EYE SH C ++ S PS ++
Sbjct: 87 QGCAFPDNAVRREVEHLPAVCINENCTWKGTIKEYELSHEGKCEFMIISCPSCKE 141
>gi|260795017|ref|XP_002592503.1| hypothetical protein BRAFLDRAFT_68994 [Branchiostoma floridae]
gi|229277723|gb|EEN48514.1| hypothetical protein BRAFLDRAFT_68994 [Branchiostoma floridae]
Length = 549
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 21/185 (11%)
Query: 271 ERMVLLEQ-SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
ER++ L+ ++ EQ +++ E+ +GV WK+ +F K + +
Sbjct: 372 ERIIALKDVALAEQDLRIQTLEMTSY--------------DGVLTWKIADFTRKRHDAIT 417
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
FYS CF++S GY+ C R+ ++ + ++SLF +++G D +L WPF ++
Sbjct: 418 GKTASFYSPCFFTSRTGYKMCARIYLNGDGMGKGTHVSLFFVVMRGHYDGLLRWPFRQKV 477
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F ++ ++ ++TD + D SF+RP + A G F+ ++ + G++ +
Sbjct: 478 SFMLVDQNNRENVTDAFRPDPTSSSFQRPTSDM--NIASGCPLFVPLSQLDSSSHGYVRD 535
Query: 446 DDTFV 450
D F+
Sbjct: 536 DTMFL 540
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKDDIFID 70
++P++ C+IC L + T CGH++C +C++ + D + + D++ D
Sbjct: 12 RIEPKYLCTICALLLCEPKQTPCGHRYCQSCVEDLARSGRRRCRARDCGEDIRLQDVYPD 71
Query: 71 NYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
REIL + C + C + + +H++ C
Sbjct: 72 KAIEREILSIAIFCSNVEDGCKWEGIVRHLMAHLSEC 108
>gi|281485910|gb|ADA70516.1| TNF receptor-associated factor 6 [Petrosaurus mearnsi]
Length = 171
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M + K + N E + + E + CNG++ WK+ +F
Sbjct: 50 HQIRELIAKMETQNSQMXDLKRTIRNLEEKITEMEA-------QQCNGIFIWKIEHFSVY 102
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R++I + A Y+SLF+H++QGE D L
Sbjct: 103 LKAQEEERPVVIHSPGFYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLP 162
Query: 379 WPFVGRIRF 387
WPF G IR
Sbjct: 163 WPFQGTIRL 171
>gi|345329770|ref|XP_003431417.1| PREDICTED: TNF receptor-associated factor 1-like [Ornithorhynchus
anatinus]
Length = 358
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L+L +R++ L Q++ ++ + + + +L+ +E L +G+Y WK+ +F
Sbjct: 167 DRDMILRL-EQRVLDLHQTLAQKDLALARLKQSLQFSE-------LASYDGIYLWKITDF 218
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDI 376
K E + +S FY++ +GY+ C RV ++ + ++SLF +++GE D +
Sbjct: 219 SRKCHESLCGRTTSLFSPVFYTARYGYKVCLRVYLNGDGTGKGTHISLFFVIMKGEYDSL 278
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ + D + D N SF++P A G F + +
Sbjct: 279 LQWPFRNKVTFMLLDQNNREHVIDAFRPDLNSASFQKPQGEM--NVASGCPMFFPLNKLQ 336
Query: 437 DPGRGFLMEDDTFVIK 452
P ++ +DDT +K
Sbjct: 337 SPKHAYV-KDDTLFLK 351
>gi|156367262|ref|XP_001627337.1| predicted protein [Nematostella vectensis]
gi|156214244|gb|EDO35237.1| predicted protein [Nematostella vectensis]
Length = 524
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 272 RMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN 331
R+ LE S+ K K+ +L ++ + I + G + WK+ F + E K N
Sbjct: 348 RLSQLESSITIHKTKLFQEDLRIQIQQAISYD-------GTFLWKIDKFTERYAEAKSGN 400
Query: 332 RY-FYSACFYSSCFGYRFCTRVNISREDAQ---YLSLFIHLVQGENDDILDWPFVGRIRF 387
YS+ FY+ FGY+ C R+ + + + YLS+FI L++GE D IL WPF I
Sbjct: 401 ATSIYSSPFYTHRFGYKLCARLFPNGDGSARDNYLSIFIALMRGEYDSILPWPFQETITI 460
Query: 388 TALNTSSEFSITDEIQSDKNFDSFKRP---VNFFLNKKAFGFNNFIRVADVLDPGRGFLM 444
T ++ + +I++ D SF+RP +N F +R RG++
Sbjct: 461 TLIDQDNGMNISETFDPDPCSISFQRPTRNINVASGCPRFCSQTVLRT-------RGYMN 513
Query: 445 EDDTFV 450
E+ FV
Sbjct: 514 ENCVFV 519
>gi|432091466|gb|ELK24544.1| TNF receptor-associated factor 5 [Myotis davidii]
Length = 558
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+V+LE + +N + L + EE + NG WK+ ++ K +E +
Sbjct: 364 QRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYAMKKREALDG 423
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 424 HTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVT 483
Query: 387 FTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ S + + I + ++D N SFKRP A G F+ L+ + ++
Sbjct: 484 LMLLDQSGKKNHIMETFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLENAKNMYIK 540
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 541 DDTIFLKVAV 550
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI + ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCASCHSVLHNPHQTGCGHRFCQHCILALRELDAVPLCPVDKEVIKSHEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVE 115
+RE+L + C C++++ + Y+ H+ C + Q S E
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRYQDHLQQCLFQAVQCSNE 142
>gi|260795015|ref|XP_002592502.1| hypothetical protein BRAFLDRAFT_68993 [Branchiostoma floridae]
gi|229277722|gb|EEN48513.1| hypothetical protein BRAFLDRAFT_68993 [Branchiostoma floridae]
Length = 373
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 271 ERMVLLEQ-SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
+RM++ +Q ++ EQ +++ EL +G+ WK+ +F K + +
Sbjct: 196 QRMLVQQQVALAEQDLRIQTLELTSY--------------DGILTWKIPDFAHKRHDAIT 241
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
FYS CF++S GY+ C R+ ++ + ++SLF +++G D +L WPF ++
Sbjct: 242 GKTASFYSPCFFTSRTGYKMCARIYLNGDGMGKGTHVSLFFVVMRGHYDGLLRWPFRQKL 301
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F L+ ++ +TD + D SF+RP + A G F+ ++ + G++
Sbjct: 302 TFMLLDQNNHKHVTDAFRPDPTSSSFQRPTSDM--NIASGCPLFVPLSQLDSSSHGYVRG 359
Query: 446 DDTFV 450
D F+
Sbjct: 360 DTMFL 364
>gi|405951387|gb|EKC19304.1| TNF receptor-associated factor 2 [Crassostrea gigas]
Length = 1587
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 173/459 (37%), Gaps = 86/459 (18%)
Query: 28 DAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREILE-----NNL 82
D ++S C +CI+ +D + D ++ K+ +F DN RRE+ +NL
Sbjct: 381 DETVSSGSQVQCKSCIEEGVDNE-------DYSIIRKEQLFPDNALRREMFSMESNCSNL 433
Query: 83 TCPYK---------------------QCSSQLSIPEYESHVNT-----------CYLKYS 110
CP+ C + + +SH C S
Sbjct: 434 GCPWTGKFRDFEKHVKDCKFRPIPCPNCGESVEVSRVKSHAEKDCPKRPVTCKYCSTSTS 493
Query: 111 QPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCR 170
Q +E+ N K + + F EH++ + N+ C GC
Sbjct: 494 QDQLEEHNKECPKYPMNCESCGKKKIQRDKVAIK-FQEHVDSE-CPNKKVKCI---AGCE 548
Query: 171 EVFKSQALLEKHYDLKTSFHLELLFNKY---------------CSDGSQSTNTPSHGRQD 215
V + + + H + K FH+E + ++ D Q T S
Sbjct: 549 AVERRRFI--SHIEEKPGFHIEKMMDQLRELTNSITGEKLRHLGEDVEQLKQTMSLSNHM 606
Query: 216 TSNQKEIEAYLMKNKEHESKLW-----DPNKNQAGDDKSSEGDCSCKTCG-DNSHLLKLV 269
N L N E +S D NK A + K + T + +L ++
Sbjct: 607 QQNGASGTNRLPSNDEAQSAEGAGINIDANKFSAVEIKVGTFEGIVTTLHREIERVLNVL 666
Query: 270 YER---MVLLEQSMLEQKIKVNNFELNLK----QTEEIEDNVVLK---LCNGVYFWKMYN 319
+R M ++++ E+ K+ E L Q ++ NV+ K NG W++ N
Sbjct: 667 DDRQKDMEIIKRDCEEKAKKIEELERKLAYSEVQVTQLSQNVLSKDNCSFNGELVWRIEN 726
Query: 320 FP-AKLKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDD 375
+ + K + +S FY+S +GY+ C R+ + + ++S+F +++G+ D
Sbjct: 727 WSEVRAKAVAGTVTSLFSPPFYTSKYGYKMCVRLYPNGDGMGKKTHISIFFAILRGDYDA 786
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRP 414
IL WPF R+ FT + S + D ++D N SFKRP
Sbjct: 787 ILTWPFSKRVIFTVFDQSGGAPVRDSFRTDPNSSSFKRP 825
>gi|340377034|ref|XP_003387035.1| PREDICTED: TNF receptor-associated factor 3-like [Amphimedon
queenslandica]
Length = 489
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY-- 333
L+ K+ L+ K +E + + L L +G WK+ F ++ + + +Y
Sbjct: 303 LQDKVAQLETTLSTKMSENEDRDFRLSLMENSNFDGSMVWKIPQFSQRMDDAR-TGKYTS 361
Query: 334 FYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FYSS +GY+ C R+ I + ++SLF +++GE D+IL WPF ++ F +
Sbjct: 362 IFSLPFYSSRYGYKMCLRLYILGDGIGKGTHMSLFFVVMKGEFDNILQWPFTHKVTFKLI 421
Query: 391 NTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
N I D Q D SF++P + A G F+ + +++ +G + DDT
Sbjct: 422 NQCGARDIMDIFQPDPLSSSFQKPKSDM--NVASGCPRFVSMNELM---QGGFIVDDTIF 476
Query: 451 IKTQVTEMT 459
IK +V T
Sbjct: 477 IKVKVDTAT 485
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 35/132 (26%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAAC-IDSWIDVKGKNYCPIDE--KVLTK 64
NNK L+ ++EC C L DA+ TSCGH C C ++ + ++G YCP + + LT
Sbjct: 16 NNKEQLE-KYECPKCEHILTDAVQTSCGHWLCHDCAVEIFKKMEGMPYCPRTDCGEELTA 74
Query: 65 DD---IFIDNYTRREI----------------------LENNL-TCPY-----KQCSSQL 93
++ F D + R+EI L N+L C + K C+
Sbjct: 75 EEGKPFFPDRFVRKEIGRFVVSCINRKFGCSWEGKLGELGNHLGNCEHNKTECKHCNQAF 134
Query: 94 SIPEYESHVNTC 105
S EY+SHVN C
Sbjct: 135 SPLEYQSHVNQC 146
>gi|281485974|gb|ADA70548.1| TNF receptor-associated factor 6 [Urosaurus ornatus]
Length = 184
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 5/113 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAHQCNGIFIWKIEHFSVYLKTQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLSWPFQGTIRL 184
>gi|344271441|ref|XP_003407547.1| PREDICTED: TNF receptor-associated factor 1 [Loxodonta africana]
Length = 415
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEM--- 327
+R+V L+Q++ ++ + E +L EE +G + WK+ N + E
Sbjct: 233 QRVVELQQTLAQKDQALGKLEQSLHLMEEAS-------FDGTFLWKITNVTRRCHESACG 285
Query: 328 KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGR 384
K I+ +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF +
Sbjct: 286 KTIS--LFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNK 343
Query: 385 IRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLM 444
+ F L+ ++ D + D SF+RP + A G F ++ + P + +
Sbjct: 344 VTFMLLDQNNREHAIDAFRPDLTSASFQRPQSE--TNVASGCPLFFPLSRLQSPKHAY-V 400
Query: 445 EDDTFVIKTQV 455
+DDT +K V
Sbjct: 401 KDDTMFLKCIV 411
>gi|291236710|ref|XP_002738284.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 559
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 273 MVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR 332
+ L + S+ EQ +++ E+ +G+ WK+ +F K ++ +
Sbjct: 384 IALKDVSLAEQDLRIQALEMTSY--------------DGILLWKITDFARKRRDAISGRK 429
Query: 333 -YFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFT 388
YS F++S GY+ C R+ ++ + ++SLF +++GE D IL WPF ++
Sbjct: 430 PSIYSPYFFTSHHGYKLCARLYLNGDGMGKGNHVSLFFVVMKGEYDAILKWPFRLKVTLM 489
Query: 389 ALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
L+ S+ + D + D + SFKRP A G F+ ++ V+D GR ++DDT
Sbjct: 490 WLDQSNREHVIDAFRPDPSSSSFKRPTGDM--NIASGCPLFMPLS-VIDSGRCEYVKDDT 546
Query: 449 FVIKTQV 455
I+ V
Sbjct: 547 AFIRIIV 553
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-------DEKVLTKDD 66
D ++ C C L + + +SCGH+FC C+D I G + CP+ + LT +
Sbjct: 24 DDKYMCVHCKRVLNNPVQSSCGHRFCKTCVDVLIRDTGSSQCPMYLDDLEPNNNTLTINT 83
Query: 67 IFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+F D RE++ + C Y C +Y+ H C
Sbjct: 84 VFPDRALAREMMRLKVRCVYNGCVWSGYYSQYKDHAMLC 122
>gi|15988516|pdb|1CZZ|A Chain A, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 17-Residue Cd40 Peptide
gi|15988517|pdb|1CZZ|B Chain B, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 17-Residue Cd40 Peptide
gi|15988518|pdb|1CZZ|C Chain C, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 17-Residue Cd40 Peptide
Length = 187
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +FP K +E +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 37 DGVFIWKISDFPRKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLF 96
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+++G ND +L WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 97 FVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 147
>gi|281485962|gb|ADA70542.1| TNF receptor-associated factor 6 [Sceloporus utiformis]
Length = 184
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 281 LEQKIKVNNFEL-NLKQT-EEIEDNVV---LKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L K++ N ++ +LK+T +ED + + CNG++ WK+ +F LK +E
Sbjct: 68 LIAKMETQNSQMGDLKRTIRNLEDKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVI 127
Query: 335 YSACFYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
+S FY+ GY+ C R++I + A Y+SLF+H++QGE D L WPF G IR
Sbjct: 128 HSPGFYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGEYDSHLSWPFQGTIRL 184
>gi|388454110|ref|NP_001252822.1| TNF receptor-associated factor 1 [Macaca mulatta]
gi|355567476|gb|EHH23817.1| Epstein-Barr virus-induced protein 6 [Macaca mulatta]
gi|355753064|gb|EHH57110.1| Epstein-Barr virus-induced protein 6 [Macaca fascicularis]
gi|383412225|gb|AFH29326.1| TNF receptor-associated factor 1 isoform a [Macaca mulatta]
Length = 416
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 277 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 336
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F + +
Sbjct: 337 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNKLQ 394
Query: 437 DPGRGFLMEDDTFVIKTQVTEMT 459
P + ++DDT +K V T
Sbjct: 395 SPKHAY-VKDDTMFLKCIVETST 416
>gi|326923377|ref|XP_003207913.1| PREDICTED: TNF receptor-associated factor 1-like [Meleagris
gallopavo]
Length = 424
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ + KL++ + YS FY++ +GY+ C R+ ++ + ++SL+
Sbjct: 275 DGVFLWKITDVSQKLQDSVTGRAVSLYSPAFYTAKYGYKVCLRIYLNGDGMGKGTHISLY 334
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+++G+ D +L WPF ++ F L+ ++ I D + D SF+RPV+ A G
Sbjct: 335 FVVMKGDYDALLPWPFRHKVTFMLLDQNNREHIIDVFRPDLASASFQRPVHDM--NVASG 392
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFV 450
F+ + + P ++ ED F+
Sbjct: 393 CPTFLPLTKLQSPKHAYVKEDTLFL 417
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-------DEKVLTKDDIF 68
++ CS C LK A+ T CGH++C+AC+ SWI KN P+ D L++ ++
Sbjct: 38 KYLCSNCNNVLKKALQTLCGHRYCSACL-SWIVRNNKN--PVCQKCKEEDPSTLSEGNLL 94
Query: 69 IDNYTRREILE 79
+ +E+++
Sbjct: 95 AEERGSKEVIK 105
>gi|402896519|ref|XP_003911344.1| PREDICTED: TNF receptor-associated factor 1 [Papio anubis]
Length = 416
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 277 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 336
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F + +
Sbjct: 337 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNKLQ 394
Query: 437 DPGRGFLMEDDTFVIKTQVTEMT 459
P + ++DDT +K V T
Sbjct: 395 SPKHAY-VKDDTMFLKCIVETST 416
>gi|291240923|ref|XP_002740365.1| PREDICTED: TNF receptor-associated factor 1-like [Saccoglossus
kowalevskii]
Length = 389
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYF 334
LE+KI + + L+ E ++ ++ +GV WK+ +F K + +
Sbjct: 203 LERKINSQDHIIALQDVALAEQDLKIQSLEMASYDGVLVWKISDFRRKRNDALSGRTTSI 262
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS CF++S GY+ C RV ++ + ++SLF +++G D +L WPF ++ F L+
Sbjct: 263 YSPCFFTSHHGYKMCARVYLNGDGMGKGNHVSLFFVIMRGTFDGLLRWPFRQKVTFMLLD 322
Query: 392 TSSEFSITDEIQSDKNFDSFKRP---VNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
++ + D + D +SFKRP +NF A G F+ ++ LD R ++DD
Sbjct: 323 QNNREHVIDAFRPDPTSNSFKRPTGDMNF-----ASGCPLFMPLSQ-LDSSRHAYVKDDC 376
Query: 449 FVIKTQV 455
IK V
Sbjct: 377 MFIKVIV 383
>gi|410986146|ref|XP_003999373.1| PREDICTED: TNF receptor-associated factor 5 isoform 1 [Felis catus]
gi|410986148|ref|XP_003999374.1| PREDICTED: TNF receptor-associated factor 5 isoform 2 [Felis catus]
Length = 558
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + NG WK+ ++ K
Sbjct: 358 LLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKTKK 417
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 418 REALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 477
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + I + ++D N SFKRP A G F+ L+
Sbjct: 478 FRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLESA 534
Query: 440 RGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 535 KNTYIKDDTVFLKVAV 550
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVED 116
+RE+L + C C++++ + Y+ H+ C + Q S E+
Sbjct: 99 CKREVLNLYVYCKNAPSCNAKIILGRYQDHLQQCPFQAVQCSNEN 143
>gi|269785041|ref|NP_001161672.1| TRAF-like protein [Saccoglossus kowalevskii]
gi|268054369|gb|ACY92671.1| TRAF-like protein [Saccoglossus kowalevskii]
Length = 463
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 193/482 (40%), Gaps = 83/482 (17%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
++ C +C ++D + +T+C H+FC C+ +++ +G CP D+ L I+ D+
Sbjct: 15 KYVCPLCRLPMRDPVQITTCEHRFCDICLQAYLS-EGIFQCPEDKIPLDYAKIYPDDDMT 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
EI+ + C Y + C + +SH+ +C KY+Q + N + +
Sbjct: 74 DEIVALTIRCSYYKDGCKWIDQLENLKSHLESC--KYNQVECPN----------NCTAVI 121
Query: 133 TNKRNSKILT-----VTVFPEHLN-------MQGSSNENFPCKFYQVGCREVFKSQALLE 180
T K L+ TV EH M+G C+F QV C K L+
Sbjct: 122 TRKLLKHHLSNECPRRTVVCEHCGADFTGVMMEGHRGS---CQFQQVQCEN--KCGVKLQ 176
Query: 181 KHYDLKTSFH---LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLW 237
+ Y + + +L KYC +H + +K
Sbjct: 177 RRYLSSHTLNECPKRMLSCKYCHKDVIFDTLQTHLH-----------HCLKYPVTCPNRC 225
Query: 238 DPNKNQAGD-DKSSEGDCSCKT--CGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNL 294
DP + GD +K + +C T C K R L EQ ++ N+ E L
Sbjct: 226 DPERLARGDLEKHLKENCPSSTINCPFQGQGCKYKSPRFAL------EQHLENNSREHLL 279
Query: 295 -------KQTEEI-----EDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSS 342
+Q EEI E + + +G WK+ N+ + + K+ S F++S
Sbjct: 280 MMCMVAKRQEEEILSLRAELDTMTGNTDGTLLWKIDNYSSLFAKAKKETTELCSKPFFTS 339
Query: 343 CFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-- 397
+GY+ + + + SL+I ++ GE D +L WPF + FT L+ + +
Sbjct: 340 KYGYKLGLTAFLNGNGSGEGTHFSLYIKILPGEYDTLLQWPFTHPVEFTLLDQTDDAKKR 399
Query: 398 --ITDEIQSDKNFDSFKRPV--NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKT 453
I + +D ++ +F RP N L +G+ I ++ R ++ DDT IK
Sbjct: 400 RHIKESFTADASWKNFHRPSKQNITL---GYGYPTLISHEEL--NLRNYI-RDDTIFIKV 453
Query: 454 QV 455
+V
Sbjct: 454 KV 455
>gi|157427808|ref|NP_001098810.1| TNF receptor-associated factor 5 [Bos taurus]
gi|157278883|gb|AAI34495.1| TRAF5 protein [Bos taurus]
gi|296478843|tpg|DAA20958.1| TPA: TNF receptor-associated factor 5 [Bos taurus]
Length = 558
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + NG WK+ ++ K
Sbjct: 358 LLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLESACYNGKLIWKVTDYKLKK 417
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
KE + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 418 KEALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 477
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + I + ++D N SFKRP A G F+ L+
Sbjct: 478 FRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLENA 534
Query: 440 RGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 535 KNTYIKDDTLFLKVAV 550
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI + ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCHQCILALRELDTVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVED 116
+RE+L + C +C++++ + Y+ H+ C + Q S E+
Sbjct: 99 CKREVLNLYVFCKNAPRCNAKIILGRYQDHLQHCLFQPVQCSNEN 143
>gi|7245308|pdb|1CZY|A Chain A, Crystal Structure Of The Complex Between The Traf Domain
Of Human Traf2 And An Lmp1 Binding Peptide
gi|7245309|pdb|1CZY|B Chain B, Crystal Structure Of The Complex Between The Traf Domain
Of Human Traf2 And An Lmp1 Binding Peptide
gi|7245310|pdb|1CZY|C Chain C, Crystal Structure Of The Complex Between The Traf Domain
Of Human Traf2 And An Lmp1 Binding Peptide
gi|7245322|pdb|1D0A|A Chain A, Structure Of Tnf Receptor Associated Factor 2 (Traf2) In
Complex With A Human Ox40 Peptide
gi|7245323|pdb|1D0A|B Chain B, Structure Of Tnf Receptor Associated Factor 2 (Traf2) In
Complex With A Human Ox40 Peptide
gi|7245324|pdb|1D0A|C Chain C, Structure Of Tnf Receptor Associated Factor 2 (Traf2) In
Complex With A Human Ox40 Peptide
gi|7245325|pdb|1D0A|D Chain D, Structure Of Tnf Receptor Associated Factor 2 (Traf2) In
Complex With A Human Ox40 Peptide
gi|7245326|pdb|1D0A|E Chain E, Structure Of Tnf Receptor Associated Factor 2 (Traf2) In
Complex With A Human Ox40 Peptide
gi|7245327|pdb|1D0A|F Chain F, Structure Of Tnf Receptor Associated Factor 2 (Traf2) In
Complex With A Human Ox40 Peptide
gi|39654028|pdb|1D01|A Chain A, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Human Cd30 Peptide
gi|39654029|pdb|1D01|B Chain B, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Human Cd30 Peptide
gi|39654030|pdb|1D01|C Chain C, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Human Cd30 Peptide
gi|39654031|pdb|1D01|D Chain D, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Human Cd30 Peptide
gi|39654032|pdb|1D01|E Chain E, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Human Cd30 Peptide
gi|39654033|pdb|1D01|F Chain F, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Human Cd30 Peptide
Length = 168
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +FP K +E +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 18 DGVFIWKISDFPRKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLF 77
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+++G ND +L WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 78 FVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 128
>gi|260795001|ref|XP_002592495.1| hypothetical protein BRAFLDRAFT_68986 [Branchiostoma floridae]
gi|229277715|gb|EEN48506.1| hypothetical protein BRAFLDRAFT_68986 [Branchiostoma floridae]
Length = 474
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 271 ERMVLLEQ-SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
ER++ L+ ++ EQ +++ EL +G+ WK+ +F K + +
Sbjct: 295 ERIIALKDVALAEQDLRIQTLELTSY--------------DGILTWKIADFTRKRHDAIT 340
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
FYS CF++S GY+ C R+ ++ + ++SLF +++G D +L WPF ++
Sbjct: 341 GKTASFYSPCFFTSRTGYKMCARIYLNGDGMGKGTHVSLFFVVMRGHYDGLLRWPFRQKV 400
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F L+ ++ + D + D SF+RP + A G F+ ++ + G++ +
Sbjct: 401 TFMLLDQNNREHVIDAFRPDPTSSSFQRPTSDM--NIASGCPLFVPLSQLDSSSHGYVRD 458
Query: 446 DDTFV 450
D F+
Sbjct: 459 DTLFI 463
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC-------PIDEKVLTKDDIF 68
++ C C L+D + T CGH++C++C+D + G C P ++ +L + ++
Sbjct: 16 KYRCPFCQLILRDPVQTHCGHRYCSSCLDIFNPGDGAARCLSCPKESPPEDTILDRSQMY 75
Query: 69 IDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSS 124
D + REI + +TCP C +E + K+ P+ +D P +
Sbjct: 76 RDRFAEREIEQMEVTCPMTGCG-------WEGSLGDLIHKHHCPATDDGPLPPADT 124
>gi|21748624|dbj|BAC03449.1| FLJ00389 protein [Homo sapiens]
Length = 351
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 160 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 211
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 212 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 271
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 272 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 329
Query: 437 DPGRGFLMEDDTFVIK 452
P + ++DDT +K
Sbjct: 330 SPKHAY-VKDDTMFLK 344
>gi|349604733|gb|AEQ00201.1| TNF receptor-associated factor 5-like protein, partial [Equus
caballus]
Length = 246
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + + +N + L + EE + NG WK+ ++ K
Sbjct: 46 LLETHDQRIVVLEGETNKHDVHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKK 105
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E E + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 106 REALEGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 165
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRP---VNFFLNKKAFGFNNFIRVADVL 436
F R+ L+ S + + I + ++D N SFKRP +N A G F+ L
Sbjct: 166 FRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEMNI-----ASGCPRFV-AHSTL 219
Query: 437 DPGRGFLMEDDTFVIKTQV 455
+ + ++DDT +K V
Sbjct: 220 ENAKNTYIKDDTLFLKVAV 238
>gi|340374451|ref|XP_003385751.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 484
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 25/214 (11%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFE---------LNLKQTEEIEDNVVLKLC-----N 310
L+ LV ++ ++ + ++ +++ + L+ K +E + + L L +
Sbjct: 273 LMSLVMTKITGIQAELTKKDSQIHTLQDKVAQLETTLSAKMSENEDRDFRLSLMENSNFD 332
Query: 311 GVYFWKMYNFPAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
G WK+ F ++ + + +Y +S FYSS +GY+ C R+ I + ++SLF
Sbjct: 333 GSMVWKIPQFSQRMDDAR-TGKYTSIFSLPFYSSRYGYKMCLRLYILGDGIGKGTHMSLF 391
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+++GE D+IL WPF ++ F +N I D Q D SF++P + A G
Sbjct: 392 FVVMKGEFDNILQWPFTHKVTFKLINQCGARDIMDIFQPDPLSSSFQKPKSDM--NVASG 449
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
F+ + +++ +G + DDT IK +V T
Sbjct: 450 CPRFVSMNELM---QGGFIVDDTIFIKVKVDTAT 480
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK--GKNYCP---IDEKVL 62
NNK L+ ++ C C L DA+ TSCGH C C + + D K G +CP DE++
Sbjct: 23 NNKEQLE-KYVCPKCDCILHDAVQTSCGHWLCNGCAEEFFDKKNEGTIFCPRPDCDEELT 81
Query: 63 TKDD--IFIDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
+D F D + R+EI ++ CP ++ C I E H+ +C
Sbjct: 82 NEDGRLFFPDRFVRKEINRFSILCPNRKFGCDWNDVISEVFVHLESC 128
>gi|291224320|ref|XP_002732155.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 582
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAK-LKEMKEINRYF 334
LE+KIK + + +K E ++ ++ +GV WK+ +F K + +
Sbjct: 396 LERKIKSQDRIIAMKDVALAEQDLRIQSLEMASYDGVLVWKITDFARKQCDAVSQRTTSI 455
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS CF++S GY+ C R+ ++ + ++SLF +++G D +L WPF ++ ++
Sbjct: 456 YSPCFFTSRHGYKMCARIYLNGDGMGKGNHVSLFFVIMRGTFDGLLRWPFRQKVTLMWID 515
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ + + D + D +SFKRP A G F+ +A + P ++ +D ++
Sbjct: 516 QNHQEHVIDAFRPDPTSNSFKRPSQDM--NIASGCPLFMPLAQIHSPRHAYVKDDVAYI 572
>gi|291408450|ref|XP_002720548.1| PREDICTED: TNF receptor-associated factor 1 [Oryctolagus cuniculus]
Length = 415
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 275
Query: 321 PAK-LKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ L+ +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCLESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNKLQ 393
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 394 SPKHAY-VKDDTMFLKCIV 411
>gi|395824096|ref|XP_003785307.1| PREDICTED: TNF receptor-associated factor 1 [Otolemur garnettii]
Length = 409
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H +L ER++ LEQ ++E + + + L + E+ + +G + WK+ N +
Sbjct: 213 HQSQLDRERILSLEQKVMELQQTLAEKDQALGKLEQSLSLMEEASFDGTFLWKITNVTRR 272
Query: 324 LKEMKEINRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILD 378
E R +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L
Sbjct: 273 CHE-SACGRTISLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLP 331
Query: 379 WPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
WPF ++ F L+ ++ D + D + SF+RP + A G F ++ + P
Sbjct: 332 WPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSRLQSP 389
Query: 439 GRGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 390 KHAY-VKDDTMFLKCIV 405
>gi|66910221|gb|AAH96595.1| TNF receptor-associated factor 1 [Mus musculus]
Length = 409
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D ++L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 218 DREYILGL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 269
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 270 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 329
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 330 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSQLQ 387
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++D T +K V
Sbjct: 388 SPKHAY-VKDGTMFLKCIV 405
>gi|291402447|ref|XP_002717577.1| PREDICTED: TNF receptor-associated factor 5 [Oryctolagus cuniculus]
Length = 558
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + NG WK+ ++ K
Sbjct: 358 LLETNDQRLVVLEGETSKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKK 417
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
KE + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 418 KEAVDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 477
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + I + ++D N SFKRP A G F+ L+
Sbjct: 478 FRQRVTLMLLDQSGKRNHIMETFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLENA 534
Query: 440 RGFLMEDDTFVIKTQV 455
+ +++DT +K V
Sbjct: 535 KNTYIKEDTLFLKVAV 550
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIRSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPS 113
+RE+L ++ C C++++ + Y+ H+ C + Q S
Sbjct: 99 CKREVLNLHVYCKNAPGCNAKVILGRYQEHLQQCLFQVVQCS 140
>gi|90085329|dbj|BAE91405.1| unnamed protein product [Macaca fascicularis]
Length = 312
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +F K +E + +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 162 DGVFIWKISDFARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLF 221
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+++G ND +L WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 222 FVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 272
>gi|300193051|ref|NP_001177876.1| TNF receptor-associated factor 1 isoform b [Homo sapiens]
gi|332229888|ref|XP_003264118.1| PREDICTED: TNF receptor-associated factor 1 isoform 2 [Nomascus
leucogenys]
gi|194381570|dbj|BAG58739.1| unnamed protein product [Homo sapiens]
Length = 294
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 103 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 154
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 155 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 214
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 215 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 272
Query: 437 DPGRGFLMEDDTFVIK 452
P + ++DDT +K
Sbjct: 273 SPKHAY-VKDDTMFLK 287
>gi|351703425|gb|EHB06344.1| TNF receptor-associated factor 5 [Heterocephalus glaber]
Length = 581
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ R+V+LE + +N + L + EE + NG WK+ ++ K
Sbjct: 381 LLETNDRRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVSDYKVKK 440
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 441 REAVDGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 500
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + I + ++D N SFK+P A G F+ L+
Sbjct: 501 FRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKKPDGDM--NIASGCPRFV-AHSTLENA 557
Query: 440 RGFLMEDDTFVIKTQV 455
R ++DDT +K V
Sbjct: 558 RNTYIKDDTLFLKVAV 573
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNAVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYE 99
+RE+L + C C++++ + Y+
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKMILGRYQ 126
>gi|291238309|ref|XP_002739073.1| PREDICTED: TNF receptor-associated factor 3-like [Saccoglossus
kowalevskii]
Length = 490
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 180/468 (38%), Gaps = 87/468 (18%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
+D ++EC+ C + L+ + CGH+ C++C+ + V + CPID+ +T+D +++D
Sbjct: 77 VDKKYECAACCQVLRYPVQFEDCGHRVCSSCLPDLLRVSPR--CPIDQAPVTRDRVYVDT 134
Query: 72 YTRREILENNLTCP--YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
+EI + C K C + + H++ C + D P N
Sbjct: 135 PFGKEIGNLAVKCCNNAKGCDWTGILQNVKDHMDNCG--------HIVVDCP-----NAC 181
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
G KR F E + C F Q + VF ++
Sbjct: 182 GAHFEKR---------FLEGHVTEDCHKRTVQCDFCQ---KTVFYKDEIVH--------M 221
Query: 190 HLELLFNKYCSDGSQSTNTP-----SHGRQDTSNQKEIEAYLMKN---KEHESKLWDPNK 241
+ +F C +G T+ P +H D K + + K K+ K
Sbjct: 222 NACKMFPVMCPNGCNETDIPRGDVKAHCDTDCPKAKIPCPFTICGCDYKCERQKMSKHIK 281
Query: 242 NQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIE 301
++ + GD T + LL E + ++ +++ + KV++ E
Sbjct: 282 DEPTQHLTMVGD----TVVKHVELLDKHQETLNDHKEQLVDCRQKVHDLE---------- 327
Query: 302 DNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNI---SRE 357
K+ WK+ + +++E K + +S F +S GY+ + + +
Sbjct: 328 -----KMYGSQLVWKIDRYAERVQEAKSGKKPTIFSPPFLTSRHGYKLAVSLCLNGDGKA 382
Query: 358 DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEI--QSDKNFDSFKRPV 415
++S+F+ + +GE D +L WPF RI FT ++ + + I Q N RP
Sbjct: 383 KNHFMSIFVCICRGEYDALLPWPFSHRIVFTVIDQCQDPAARRNIAYQIKPNICKENRP- 441
Query: 416 NFFLNK------KAFGFNNFIRVADV--LDPGRGFLMEDDTFVIKTQV 455
FL + +FG + +A + LD + DDT IK V
Sbjct: 442 --FLGRPSGERNASFGTQKMVPLATIKTLD-----YIRDDTLFIKVHV 482
>gi|354472772|ref|XP_003498611.1| PREDICTED: TNF receptor-associated factor 5 [Cricetulus griseus]
gi|344246508|gb|EGW02612.1| TNF receptor-associated factor 5 [Cricetulus griseus]
Length = 558
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + +G WK+ ++ AK
Sbjct: 358 LLEASDQRLVVLEGETSKHDAHINIHKAQLNKNEERFKLLEGACYSGKLIWKVTDYKAKK 417
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
++ E + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 418 RKAVEGHVVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 477
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + I + ++D N SF+RP A G F+ L+
Sbjct: 478 FRQRVTLMLLDQSGKKNHIVETFKADPNSSSFRRPDGEM--NIASGCPRFVS-HSTLENS 534
Query: 440 RGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 535 KNTYIKDDTLFLKVAV 550
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L+ R++C+ C L + T CGH+FC CI S + CP+D++ + ++F DN
Sbjct: 38 QLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRERNTVPICPVDKEAIKPQEVFKDN 97
Query: 72 YTRREILENNLTCP-YKQCSSQLSIPEYESHVNTC 105
+RE+L + C C++++ + ++ H+ C
Sbjct: 98 CCKREVLNLYVYCKNAPGCNARVILGRFQDHLQHC 132
>gi|326915231|ref|XP_003203923.1| PREDICTED: TNF receptor-associated factor 5-like [Meleagris
gallopavo]
Length = 561
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
L++ +R+V+LE + +++N + L + EE + NG WK+ ++ K
Sbjct: 361 LMETYDQRLVVLESQSSKHDLQINIHKAQLNKNEERFKLLEGTCYNGKLIWKITDYKMKK 420
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
KE E +S FY+S GYR C R ++ + + ++SL+ +++GE D +L WP
Sbjct: 421 KEAMEGRVLSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHVSLYFVVMRGEFDSLLPWP 480
Query: 381 FVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F ++ L+ T + I + ++D N SFKRP A G F+ VL+
Sbjct: 481 FKQKVTLMLLDQTGKKNHIVEVFKADPNSSSFKRPDGEM--NIASGCPRFVP-HTVLENT 537
Query: 440 RGFLMEDDTFVIKTQV 455
+ + DDT +K V
Sbjct: 538 KNTYVRDDTLFLKVVV 553
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKV----LTKDDIF 68
L+ R++C+ C L + T CGH+FC CI + + CP+D++ + + +F
Sbjct: 38 LEDRYKCAYCHLVLHNPHQTGCGHRFCQQCILTLRGLNAVPTCPVDKETIXLCMQRPPVF 97
Query: 69 IDNYTRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQ 111
DN +RE+L + C + C+S++ + Y+ H+ C + Q
Sbjct: 98 KDNCCKREVLNLYVFCKNFPDCNSKIILGRYQEHLQQCLFESVQ 141
>gi|281485906|gb|ADA70514.1| TNF receptor-associated factor 6 [Cophosaurus texanus]
Length = 183
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + C+G++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCSGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIR 386
FY+ GY+ C R++I +A Y+SLFIH +QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNAAKCANYISLFIHTMQGEYDSHLSWPFQGTIR 183
>gi|340370418|ref|XP_003383743.1| PREDICTED: TNF receptor-associated factor 3-like [Amphimedon
queenslandica]
Length = 483
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 159/391 (40%), Gaps = 64/391 (16%)
Query: 82 LTCPYKQCSSQLSIPEYESHVNTC--------YLKYSQPSVE----DITDSPTSSFRNTS 129
+TCP+ C +L E +HV++C Y + PS + TD P S +S
Sbjct: 132 ITCPHPHCGIKLLRNEMSTHVSSCIYTPSSCEYCLETYPSFQIENHHQTDCPEYSILCSS 191
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
G + L +HL PC++ + GC + LL KHY + +
Sbjct: 192 GC------GQKLLRKELGDHLANYCPLTVR-PCRYTKYGCHKKDTLDGLL-KHYKDDSGY 243
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKS 249
HL LL + GSQ + S ++ +E E E ++ + + + + K
Sbjct: 244 HLGLLEKTLSAGGSQ---------LEDSRKQLVE-------ETEKRVLESTRAELTEQKD 287
Query: 250 SEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC 309
+ +R+ + +L+ +IK++ + + + + +
Sbjct: 288 E------------------MEKRLAPICDGLLKCEIKLSELQDSFSELSLLFQTLQATSY 329
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLF 365
NG + WK+ + + K YSA FY+S FGY+ C R+ ++ + + ++S F
Sbjct: 330 NGQFVWKIPEVDRRRHDAKTGKTVSLYSAPFYTSRFGYKLCLRLYLNGDGSGKNSHISYF 389
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+ +++GE D +L WPF + L+ S S I + + + SF +P + A
Sbjct: 390 LTIMRGEYDALLPWPFSQMVTLMLLDQSGSGKHIVQCFKPEPSSSSFWQPKSEM--NVAS 447
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F ++ + DP ++DD K +
Sbjct: 448 GCPRFAPLSVLNDPA---YVKDDAMFFKVMI 475
>gi|258678946|dbj|BAI40013.1| tumor necrosis factor receptor-associated factor 6 [Marsupenaeus
japonicus]
Length = 243
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
LDP++EC+ICL L+ I T+CGH+FC CI + + + + CP+D LT+ D+F D+
Sbjct: 25 LDPKYECAICLLGLRPPIQTTCGHRFCKDCIFNCMS-ESSSRCPVDNTPLTEADLFPDSC 83
Query: 73 TRREILENNLTCPYK--QCSSQLSIPEYESHVNTC 105
REIL+ ++ CP C + + E H C
Sbjct: 84 AEREILQLSVKCPNHGLGCRRTVDLVYIEHHTQAC 118
>gi|395504479|ref|XP_003756576.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Sarcophilus
harrisii]
Length = 567
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + E ++ KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMHVLLSAPSPKCTACQENII-KDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
+REIL + C + C+ QL++ H+ +
Sbjct: 105 CKREILALQIYCRNESRGCTEQLTLGHLLVHLKS 138
>gi|260795007|ref|XP_002592498.1| hypothetical protein BRAFLDRAFT_68989 [Branchiostoma floridae]
gi|229277718|gb|EEN48509.1| hypothetical protein BRAFLDRAFT_68989 [Branchiostoma floridae]
Length = 552
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 271 ERMVLLEQ-SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
ER++ L+ ++ EQ +++ EL +G+ WK+ +F K + +
Sbjct: 374 ERIIALKDVALAEQDLRIQTLELTSY--------------DGILTWKIADFTRKRHDAIT 419
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
FYS CF++S GY+ C R+ ++ + ++SLF +++G D +L WPF ++
Sbjct: 420 GKTASFYSPCFFTSRTGYKMCARIYLNGDGMGKGTHVSLFFVVMRGHYDGLLRWPFRQKV 479
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F L+ ++ + D + D SF+RP + A G F+ ++ LD +
Sbjct: 480 TFMLLDQNNREHVIDAFRPDPTSSSFQRPTSDM--NIASGCPLFVPLSQ-LDSSSHAYVR 536
Query: 446 DDTFVIKTQV 455
DDT ++ V
Sbjct: 537 DDTMFLRVIV 546
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 54/234 (23%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID--------------- 58
DP++ CS C L + TSCGH++C +C++ D+ N P
Sbjct: 14 DPKYCCSCCTLLLNEPRQTSCGHRYCKSCLE---DLNRANEGPFTCKVRSCGESINIREI 70
Query: 59 ------EKVLTKDDIFIDN---------------YTRREILENNLTCPYKQCSSQLSIPE 97
EK + K ++F DN R E + C +K C ++ +
Sbjct: 71 FPDRAIEKEIQKFEVFCDNNDDGCTWEGLLHQLQAHRGECEYEKIACIHKDCGERIPRKD 130
Query: 98 YESHV-NTCYLKYS--QPSVEDITDSPTSSFRNTSGIPTNK---RNSKILTVTVFPEHLN 151
H+ +TC L+ S Q E + + + + + + K LT + +H +
Sbjct: 131 LSKHLTDTCALRPSACQWCKESLPFKDIAKHQESCPMAPARCKWCGKKGLTRSQLQDHQH 190
Query: 152 MQGS--SNENFPCKFYQVGCREVFK-------SQALLEKHYDLKTSFHLELLFN 196
Q N PC F VGC+E + + + H ++ + L+L N
Sbjct: 191 PQTGDCPNMKLPCHFEPVGCQEQLERKQHGDHQKKTITAHLNMVLAMLLQLATN 244
>gi|395504481|ref|XP_003756577.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Sarcophilus
harrisii]
Length = 542
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 389 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 448
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 449 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 506
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 507 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 534
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + E ++ KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMHVLLSAPSPKCTACQENII-KDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
+REIL + C + C+ QL++ H+ +
Sbjct: 105 CKREILALQIYCRNESRGCTEQLTLGHLLVHLKS 138
>gi|93117589|gb|ABE99697.1| TNF receptor associated factor 1 [Ctenopharyngodon idella]
Length = 552
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 276 LEQSMLEQKIKVNNFELN---LKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR 332
LE + EQ+ ++ +++ L+Q + +V +G + W++ + KL+E ++
Sbjct: 368 LETKIAEQQQRLARKDIHITSLQQCISAQQDVSY---DGTFLWRLCDVSQKLREAASGHK 424
Query: 333 YF-YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFT 388
YS FY++ +G++ C R+ ++ + ++SLF +++GE D IL WPF ++ F
Sbjct: 425 ISQYSPAFYTARYGFKVCMRLYLNGDGVGKGTHISLFFVIMKGEYDPILSWPFRHKVTFF 484
Query: 389 ALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
++ + + D + D + SF RPV+ A G F + + P + +DDT
Sbjct: 485 LIDQNQREHVIDAFRPDLSSASFHRPVSEM--NVASGCPLFFPLGKLRSPKHAYC-KDDT 541
Query: 449 FVIKTQV 455
IK V
Sbjct: 542 IYIKCVV 548
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 39/217 (17%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-----------DEKVLTK 64
++ CS C L A T CGH++C AC++ W+ K+ D VLT
Sbjct: 40 KYLCSNCNNVLNKARQTVCGHRYCLACVN-WLVRNNKDLVCTKCKEEDPSVESDTSVLTL 98
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDITDSPT 122
D F D +EIL+ + C + C + ++ +E H + C L + T
Sbjct: 99 DQFFNDAAINKEILDLKVHCANQGCPWRSTLKNFEDHQSQCEYALIPCNIGCGIMVQRKT 158
Query: 123 SSFRNTSGIPTNKRN----SKILTVTVFPEHL------------------NMQGSSNENF 160
+ R G P NK + +LT +H+ N GSS +
Sbjct: 159 LATRLERGCPNNKTTCPSCAGVLTPRELQKHVCSSSGDKKTAKADKRQKNNHSGSSKKKE 218
Query: 161 PCKFYQVGCREVFKSQA-LLEKHYDLKTSFHLELLFN 196
PC F +VGC FK A +++H HL+LL +
Sbjct: 219 PCVFSEVGCP--FKGNADKVKEHESCSHVGHLQLLLD 253
>gi|296475317|tpg|DAA17432.1| TPA: Tnf receptor-associated factor 3-like isoform 2 [Bos taurus]
Length = 543
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC C+ + + C ++V+ KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCSPKQTECGHRFCETCMGALLSSSSPK-CTACQEVIIKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIFCRNEGRGCTEQLALGHLLVHLKNDC 141
>gi|126290192|ref|XP_001367090.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Monodelphis
domestica]
Length = 542
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 389 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 448
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 449 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 506
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 507 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 534
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + E ++ KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMHVLLSAPSPKCTACQENII-KDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
+REIL + C + C+ QL++ H+ +
Sbjct: 105 CKREILALQIYCRNESRGCTEQLTLGHLLVHLKS 138
>gi|119602203|gb|EAW81797.1| TNF receptor-associated factor 3, isoform CRA_b [Homo sapiens]
Length = 543
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|149408623|ref|XP_001507398.1| PREDICTED: TNF receptor-associated factor 3 isoform 1
[Ornithorhynchus anatinus]
Length = 541
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 388 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 447
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 448 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 505
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 506 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 533
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C++ + K C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMNMLLSSSPK--CSACQENVIKDKVFKDNC 103
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
+REIL + C + C+ QL++ H+ +
Sbjct: 104 CKREILALQIYCRNENRGCTEQLTLGHLLVHLKS 137
>gi|157823541|ref|NP_001102194.1| TNF receptor-associated factor 3 [Rattus norvegicus]
gi|149044099|gb|EDL97481.1| Tnf receptor-associated factor 3 (predicted) [Rattus norvegicus]
Length = 567
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 45 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDN 103
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C QL++ H+ N C
Sbjct: 104 CCKREILALQIYCRNEGRGCVEQLTLGHLLVHLKNEC 140
>gi|395853774|ref|XP_003799377.1| PREDICTED: TNF receptor-associated factor 3 isoform 3 [Otolemur
garnettii]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCHLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQESIIKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C K C+ QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNESKGCTEQLTLGHLLVHLKNDC 141
>gi|126290189|ref|XP_001367040.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Monodelphis
domestica]
Length = 567
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + E ++ KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMHVLLSAPSPKCTACQENII-KDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
+REIL + C + C+ QL++ H+ +
Sbjct: 105 CKREILALQIYCRNESRGCTEQLTLGHLLVHLKS 138
>gi|410351751|gb|JAA42479.1| TNF receptor-associated factor 3 [Pan troglodytes]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|22027616|ref|NP_003291.2| TNF receptor-associated factor 3 isoform 1 [Homo sapiens]
gi|22027618|ref|NP_663777.1| TNF receptor-associated factor 3 isoform 1 [Homo sapiens]
gi|116242824|sp|Q13114.2|TRAF3_HUMAN RecName: Full=TNF receptor-associated factor 3; AltName:
Full=CAP-1; AltName: Full=CD40 receptor-associated
factor 1; Short=CRAF1; AltName: Full=CD40-binding
protein; Short=CD40BP; AltName: Full=LMP1-associated
protein 1; Short=LAP1
gi|675460|gb|AAA65732.1| LMP1 associated protein [Homo sapiens]
gi|28193138|emb|CAD62311.1| unnamed protein product [Homo sapiens]
gi|50959756|gb|AAH75086.1| TNF receptor-associated factor 3 [Homo sapiens]
gi|50959988|gb|AAH75087.1| TNF receptor-associated factor 3 [Homo sapiens]
gi|261858540|dbj|BAI45792.1| TNF receptor-associated factor 3 [synthetic construct]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL + H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFE 144
>gi|348586255|ref|XP_003478884.1| PREDICTED: TNF receptor-associated factor 1-like [Cavia porcellus]
Length = 416
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R++ L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVMELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFVWKITNV 276
Query: 321 PAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGEND 374
+ E + I+ +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D
Sbjct: 277 TRRCHESACGRTIS--LFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYD 334
Query: 375 DILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVAD 434
+L WPF ++ F L+ ++ D + D + SF+RP + A G F +
Sbjct: 335 ALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNK 392
Query: 435 VLDPGRGFLMEDDTFV 450
+ P ++ +D F+
Sbjct: 393 LQSPKHAYVKDDTMFL 408
>gi|301766966|ref|XP_002918908.1| PREDICTED: TNF receptor-associated factor 3-like isoform 2
[Ailuropoda melanoleuca]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIIKDKVFKDN 104
Query: 72 YTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CCKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC 141
>gi|22027620|ref|NP_663778.1| TNF receptor-associated factor 3 isoform 2 [Homo sapiens]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL + H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFE 144
>gi|426378102|ref|XP_004055783.1| PREDICTED: TNF receptor-associated factor 3 isoform 3 [Gorilla
gorilla gorilla]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCY 106
+REIL + C + C+ QL++ H+ N C+
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCH 142
>gi|719293|gb|AAC52175.1| CD40 receptor associated factor 1 [Mus musculus]
gi|1095178|prf||2107334A CRAF1 gene
Length = 567
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 45 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDN 103
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 104 CCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNEC 140
>gi|114842405|ref|NP_035762.2| TNF receptor-associated factor 3 isoform a [Mus musculus]
gi|342187069|sp|Q60803.2|TRAF3_MOUSE RecName: Full=TNF receptor-associated factor 3; AltName: Full=CD40
receptor-associated factor 1; Short=CRAF1; AltName:
Full=TRAFAMN
gi|148686695|gb|EDL18642.1| Tnf receptor-associated factor 3 [Mus musculus]
gi|187951741|gb|AAI37636.1| TNF receptor-associated factor 3 [Mus musculus]
gi|187953645|gb|AAI37635.1| TNF receptor-associated factor 3 [Mus musculus]
Length = 567
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 45 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDN 103
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 104 CCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNEC 140
>gi|595911|gb|AAA56753.1| CD40 binding protein [Homo sapiens]
Length = 567
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHVNTCYLK 108
+REIL + C + C+ QL + N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLMLGHLVHLKNDCHFE 143
>gi|354473206|ref|XP_003498827.1| PREDICTED: TNF receptor-associated factor 3 [Cricetulus griseus]
gi|344238770|gb|EGV94873.1| TNF receptor-associated factor 3 [Cricetulus griseus]
Length = 567
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 45 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDN 103
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
+REIL + C + C+ QL++ H+ +
Sbjct: 104 CCKREILALQICCRNEGRGCAEQLTLGHLLMHLKS 138
>gi|149408621|ref|XP_001507440.1| PREDICTED: TNF receptor-associated factor 3 isoform 2
[Ornithorhynchus anatinus]
Length = 566
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 413 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 472
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 473 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 530
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 531 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 558
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C++ + K C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMNMLLSSSPK--CSACQENVIKDKVFKDNC 103
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
+REIL + C + C+ QL++ H+ +
Sbjct: 104 CKREILALQIYCRNENRGCTEQLTLGHLLVHLKS 137
>gi|695358|gb|AAA68195.1| CD40-associated protein [Homo sapiens]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|410962997|ref|XP_003988053.1| PREDICTED: TNF receptor-associated factor 3 isoform 3 [Felis catus]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIIKDKVFKDN 104
Query: 72 YTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CCKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC 141
>gi|345803832|ref|XP_003435114.1| PREDICTED: TNF receptor-associated factor 3 [Canis lupus
familiaris]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAAVLSSSSPK-CTACQESIIKDKVFKDN 104
Query: 72 YTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CCKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC 141
>gi|114654878|ref|XP_001164813.1| PREDICTED: TNF receptor-associated factor 3 isoform 3 [Pan
troglodytes]
gi|397470955|ref|XP_003807075.1| PREDICTED: TNF receptor-associated factor 3 [Pan paniscus]
gi|726088|gb|AAC50112.1| CD40 receptor associated factor 1 [Homo sapiens]
gi|119602201|gb|EAW81795.1| TNF receptor-associated factor 3, isoform CRA_a [Homo sapiens]
gi|119602202|gb|EAW81796.1| TNF receptor-associated factor 3, isoform CRA_a [Homo sapiens]
gi|410211232|gb|JAA02835.1| TNF receptor-associated factor 3 [Pan troglodytes]
gi|410263286|gb|JAA19609.1| TNF receptor-associated factor 3 [Pan troglodytes]
gi|410290026|gb|JAA23613.1| TNF receptor-associated factor 3 [Pan troglodytes]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|395853770|ref|XP_003799375.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Otolemur
garnettii]
gi|395853772|ref|XP_003799376.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Otolemur
garnettii]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCHLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQESIIKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C K C+ QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNESKGCTEQLTLGHLLVHLKNDC 141
>gi|311261588|ref|XP_001927435.2| PREDICTED: TNF receptor-associated factor 3-like [Sus scrofa]
gi|417515447|gb|JAA53552.1| TNF receptor-associated factor 3 isoform 1 [Sus scrofa]
Length = 572
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 419 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 478
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 479 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 536
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 537 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 564
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 51 VEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIVKDKVFKDNC 109
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 110 CKREILALQIYCRNEGRGCAEQLTLGHLLVHLKNDC 145
>gi|338720094|ref|XP_003364119.1| PREDICTED: TNF receptor-associated factor 3 [Equus caballus]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIIKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C QL++ H+ N C
Sbjct: 105 CCKREILALQIYCRNESRGCVEQLTLGHLLVHLKNDC 141
>gi|1488198|gb|AAC52710.1| TRAFamn [Mus musculus]
Length = 567
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+F +C+ + + C ++ + KD +F DN
Sbjct: 45 TVEDKYKCEKCRLVLCNPKQTECGHRFWQSCMAALLSSSSPK-CTACQESIIKDKVFKDN 103
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 104 CCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNEC 140
>gi|296215937|ref|XP_002754342.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Callithrix
jacchus]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDC 141
>gi|440900123|gb|ELR51323.1| TNF receptor-associated factor 3 [Bos grunniens mutus]
Length = 569
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 416 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 475
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 476 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 533
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 534 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 561
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC C+ + + C ++V+ KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCSPKQTECGHRFCETCMGALLSSSSPK-CTACQEVIIKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIFCRNEGRGCTEQLALGHLLVHLKNDC 141
>gi|73964048|ref|XP_854615.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Canis lupus
familiaris]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAAVLSSSSPK-CTACQESIIKDKVFKDN 104
Query: 72 YTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CCKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC 141
>gi|114842403|ref|NP_001041671.1| TNF receptor-associated factor 3 isoform b [Mus musculus]
gi|74181231|dbj|BAE27866.1| unnamed protein product [Mus musculus]
Length = 542
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 389 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 448
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 449 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 506
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 507 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 534
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 45 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDN 103
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 104 CCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNEC 140
>gi|380816102|gb|AFE79925.1| TNF receptor-associated factor 3 isoform 1 [Macaca mulatta]
gi|383412543|gb|AFH29485.1| TNF receptor-associated factor 3 isoform 1 [Macaca mulatta]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESVVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|410962993|ref|XP_003988051.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Felis catus]
gi|410962995|ref|XP_003988052.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Felis catus]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIIKDKVFKDN 104
Query: 72 YTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CCKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC 141
>gi|355693586|gb|EHH28189.1| hypothetical protein EGK_18570 [Macaca mulatta]
gi|384949180|gb|AFI38195.1| TNF receptor-associated factor 3 isoform 1 [Macaca mulatta]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|297695931|ref|XP_002825180.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Pongo
abelii]
gi|426378098|ref|XP_004055781.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Gorilla
gorilla gorilla]
gi|426378100|ref|XP_004055782.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Gorilla
gorilla gorilla]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|329663432|ref|NP_001192515.1| TNF receptor-associated factor 3 [Bos taurus]
gi|296475316|tpg|DAA17431.1| TPA: Tnf receptor-associated factor 3-like isoform 1 [Bos taurus]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC C+ + + C ++V+ KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCSPKQTECGHRFCETCMGALLSSSSPK-CTACQEVIIKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIFCRNEGRGCTEQLALGHLLVHLKNDC 141
>gi|355778871|gb|EHH63907.1| hypothetical protein EGM_16979 [Macaca fascicularis]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + +D +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAALLSSSSPK-CAACQESIVRDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|10120531|pdb|1F3V|B Chain B, Crystal Structure Of The Complex Between The N-Terminal
Domain Of Tradd And The Traf Domain Of Traf2
Length = 171
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +FP K +E +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 21 DGVFIWKISDFPRKRQEAVAGRIPAIFSPAFYTSRYGYKXCLRIYLNGDGTGRGTHLSLF 80
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+ +G ND +L WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 81 FVVXKGPNDALLRWPFNQKVTLXLLDQNNREHVIDAFRPDVTSSSFQRPVN 131
>gi|332254217|ref|XP_003276225.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Nomascus
leucogenys]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|149737685|ref|XP_001490050.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Equus
caballus]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIIKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C QL++ H+ N C
Sbjct: 105 CCKREILALQIYCRNESRGCVEQLTLGHLLVHLKNDC 141
>gi|403284095|ref|XP_003933419.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 543
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC +C+ S + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCSPKQTECGHRFCESCMASLLSSSSPK-CTACQESIVKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + CS QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNESRGCSEQLTLGHLLVHLKNDC 141
>gi|403284093|ref|XP_003933418.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC +C+ S + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCSPKQTECGHRFCESCMASLLSSSSPK-CTACQESIVKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + CS QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNESRGCSEQLTLGHLLVHLKNDC 141
>gi|301766964|ref|XP_002918907.1| PREDICTED: TNF receptor-associated factor 3-like isoform 1
[Ailuropoda melanoleuca]
gi|281354190|gb|EFB29774.1| hypothetical protein PANDA_007441 [Ailuropoda melanoleuca]
Length = 568
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIIKDKVFKDN 104
Query: 72 YTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CCKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC 141
>gi|426240118|ref|XP_004013961.1| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 5
[Ovis aries]
Length = 562
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + NG WK+ ++ KL
Sbjct: 358 LLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLESACYNGKLIWKVTDY--KL 415
Query: 325 KEMKEINRYFYSAC-------FYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGEND 374
K+ + ++ + S C F S GYR C R ++ + + +LSL+ +++GE D
Sbjct: 416 KKKEALDGHTVSICSQPLQPPFSPSRCGYRLCARAYLNGDGSGKGTHLSLYFMVMRGEFD 475
Query: 375 DILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRP---VNFFLNKKAFGFNNFI 430
+L WPF R+ L+ S + + I + ++D N SFKRP VN A G F+
Sbjct: 476 SLLQWPFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEVNI-----ASGCPRFV 530
Query: 431 RVADVLDPGRGFLMEDDTFVIKTQV 455
L+ + ++DDT +K V
Sbjct: 531 -AHSTLENAKNTYIKDDTLFLKVAV 554
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C++C L + T CGH+FC C+ S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCALCHSVLHNPHQTGCGHRFCHRCMLSLRELDTVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVED 116
+RE+L + C +C++++++ Y+ H+ C + Q S E+
Sbjct: 99 CKREVLNLYVFCKNAPRCNAKITLGRYQDHLQHCPFQPVQCSNEN 143
>gi|326667571|ref|XP_001344501.3| PREDICTED: TNF receptor-associated factor 2-like [Danio rerio]
Length = 584
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACF 339
LE+++ V + L + + E + +GV+ W++ +F K ++ + +S F
Sbjct: 407 LERQVGVKD--LTVAEMEGRLREMSATTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAF 464
Query: 340 YSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+S +GY+ C R+ ++ + +LSLF +++G +D +L WPF ++ L+ S+
Sbjct: 465 YTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQSNRE 524
Query: 397 SITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
I D + D SF+RPV+ A G F +A + G+ + DDT IK V
Sbjct: 525 HIIDAFRPDITSSSFQRPVSEM--NIASGCPLFCPLAKL--EGKNSYIRDDTIFIKAIV 579
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGK--NYCPIDE------KVLTK 64
L+ + C+ C L+ CGH+FC+ C + + + N C ++ +L +
Sbjct: 28 LEDKHLCNCCQNILRRPFQAQCGHRFCSYCFNRTVGSGPQKCNACIKEDIFEEPTSILKQ 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYE-SHVNTC 105
F DN RRE+ C + CS + SI +YE SH C
Sbjct: 88 GCAFPDNAARREVENLPAVCFNEGCSWKGSIKDYELSHEGKC 129
>gi|351698917|gb|EHB01836.1| TNF receptor-associated factor 1 [Heterocephalus glaber]
Length = 415
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R++ L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DQERILSL-EQRVMELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFVWKITNV 275
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 276 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 335
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F + +
Sbjct: 336 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLNKLQ 393
Query: 437 DPGRGFLMEDDTFVIK 452
P + ++DDT +K
Sbjct: 394 SPKHAY-VKDDTMFLK 408
>gi|74181137|dbj|BAE27835.1| unnamed protein product [Mus musculus]
Length = 542
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 389 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 448
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 449 FVIMRGEYDALLPWPFKRKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 506
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 507 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 534
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 45 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDN 103
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 104 CCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNEC 140
>gi|348554665|ref|XP_003463146.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Cavia
porcellus]
Length = 542
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 389 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 448
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 449 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 506
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 507 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 534
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCRLVLCSPKQTECGHRFCETCMAALLSSPSPK-CTACQESIIKDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CKREILALQIYCRNEARGCAEQLTLGHLLVHLKNDC 140
>gi|224047172|ref|XP_002194259.1| PREDICTED: TNF receptor-associated factor 5 [Taeniopygia guttata]
Length = 557
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
L++ +R+V+LE + +++N + L + EE + NG WK+ ++ K
Sbjct: 357 LMETYDQRLVVLEDQSSKHDLQINIHKAQLNKNEERFKLLEGTCYNGKLIWKITDYQKKK 416
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E E S FY+S GYR C R ++ + + ++SL+ +++GE D +L WP
Sbjct: 417 REAVEGRVLSIASQPFYTSRCGYRLCARAYLNGDGSGKGTHISLYFVVMRGEFDSLLLWP 476
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F ++ L+ S + + I D ++D N SFKRP A G F+ VL+
Sbjct: 477 FKQKVTLMLLDQSGKKNHIVDVFRADPNSSSFKRPDGEM--NIASGCPRFV-PHTVLEST 533
Query: 440 RGFLMEDDTFVIKTQV 455
+ + DDT +K V
Sbjct: 534 KNTYIRDDTLFLKVVV 549
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
+L+ R++C+ C L++ T CGH+FC CI + ++ CP+D++ + ++F DN
Sbjct: 37 SLEERYKCAYCHLVLRNPHQTGCGHRFCQQCILALRELNAVPTCPVDKETIKMHEVFKDN 96
Query: 72 YTRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQ 111
+RE+L ++ C + CSS++ + Y+ H+ C + +Q
Sbjct: 97 CCKREVLNLHVFCKNFPDCSSKVILGRYQEHLQQCLFECTQ 137
>gi|344273690|ref|XP_003408652.1| PREDICTED: TNF receptor-associated factor 3 [Loxodonta africana]
Length = 564
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 411 NGVLVWKIRDYRRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 470
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 471 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 528
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 529 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 556
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPRQTECGHRFCETCMAALLS-SASPKCTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC 84
+REIL + C
Sbjct: 105 CCKREILALQIYC 117
>gi|51011109|ref|NP_001003513.1| TNF receptor-associated factor 3 [Danio rerio]
gi|50416906|gb|AAH77157.1| TNF receptor-associated factor 3 [Danio rerio]
Length = 573
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 253 DCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGV 312
D SC SH L + +++ + M +++ +L L+ E N G
Sbjct: 370 DSSCVNSASGSHTLASLEQQLTRHDDLMSVHDVRLAEMDLKLQVLETASFN-------GT 422
Query: 313 YFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF +
Sbjct: 423 LIWKIRDYKRRKQEAVVSKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVV 482
Query: 369 VQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
++GE D +L WPF ++ ++ + + D + D + SF+RP A G
Sbjct: 483 MRGEYDALLQWPFKQKVTLMLMDQGPARKHLGDAFKPDPSSSSFRRPTGEM--NIASGCP 540
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 541 LFV-AQTVLE--NGTYIKDDTIFIKVTV 565
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYT 73
+P++ C C L + T CGH+FC +CI+ + K CP D L +D IF D
Sbjct: 51 EPKYCCETCRLVLCNPRQTECGHRFCESCINELLS-KPNPVCPADLLPLFEDKIFRDVCC 109
Query: 74 RREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
REI+ + C ++ C Q+ + + H+ C
Sbjct: 110 NREIMALKVYCRSEKNGCKEQMCLQQVMEHLVIC 143
>gi|340384827|ref|XP_003390912.1| PREDICTED: TNF receptor-associated factor 3-like [Amphimedon
queenslandica]
Length = 465
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 25/217 (11%)
Query: 262 NSHLLKLVYERMVLLEQSMLEQKIKVNNFE---------LNLKQTEEIEDNVVLKLC--- 309
++ L+ LV ++ ++ + ++ +++ + L+ K +E + + L L
Sbjct: 251 DNKLMSLVMTKITGIQAELTKKDSQIHTLQDKVAQLETTLSTKMSENEDRDFRLSLMENS 310
Query: 310 --NGVYFWKMYNFPAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISRED---AQYL 362
+G WK+ F ++ + + +Y +S FY S +GY+ C R+ I + ++
Sbjct: 311 NFDGSMVWKIPQFSQRMDDAR-TGKYASIFSLPFYFSRYGYKMCLRLYILGDGIGKGTHM 369
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKK 422
SLF +++GE D+IL WPF ++ F +N I D Q D SF++P +
Sbjct: 370 SLFFVVMKGEFDNILQWPFTHKVTFKLINQCGARDIIDIFQPDPLSSSFQKPKSDM--NV 427
Query: 423 AFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
A G F+ + +++ +G + DDT IK +V T
Sbjct: 428 ASGCPRFVSMNELM---QGGFIVDDTIFIKVKVDTAT 461
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 36/126 (28%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCP---IDEKVLTKDD--IFI 69
++ C C L DA+ TSCGH C C D K +CP E++ T++ F
Sbjct: 9 KYACPKCDCILNDAVQTSCGHWLCDGCAKELFDRKESTIFCPRTDCGEELTTEEGRPFFP 68
Query: 70 DNYTRREI-----------------------LENNLTCPYK-------QCSSQLSIPEYE 99
D + R+EI LE+ +C Y+ C S+ EY+
Sbjct: 69 DRFVRKEINRFSIMCRNRKLGCHWSGKIDELLEHLRSCVYEIKKEECSHCKEGFSLSEYQ 128
Query: 100 SHVNTC 105
SHV+ C
Sbjct: 129 SHVDQC 134
>gi|281485918|gb|ADA70520.1| TNF receptor-associated factor 6 [Phrynosoma platyrhinos]
Length = 172
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + NG++ WK+ +F LK +E +S
Sbjct: 61 METQNSQMGDLKRTIRNLEEKITEMEAQQSNGIFIWKIEHFSVYLKAQEEERPVVIHSPA 120
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIR 386
FY+ GY+ C R++I + A Y+SLFIH +QGE D L WPF G IR
Sbjct: 121 FYTGKPGYKLCMRLHIQLPNVAKCANYISLFIHTMQGEYDSHLSWPFQGTIR 172
>gi|405975126|gb|EKC39717.1| TNF receptor-associated factor 6 [Crassostrea gigas]
Length = 282
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 90/224 (40%), Gaps = 39/224 (17%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFID 70
+LD ++ C +CL L + + TSCGH+FC CI I+ + CP+D V D++F D
Sbjct: 26 DLDRKYLCPVCLSALHEPMQTSCGHRFCKTCIQGVINGRANAKCPVDNVVFKCNDELFED 85
Query: 71 NYTRREILENNLTCPY--KQCSSQLSIPEYESH-----------VNTCYLKYSQPSVEDI 117
+RE+L + C K C+ + Y+ H N C L+ + + D
Sbjct: 86 KAFQREVLSQTVKCGNHDKGCTWTGELRSYQEHDARCQYVSVHCENNCGLRIPRHQLTDH 145
Query: 118 TD----SPTSSFRNTSGIP-TNKRNSKILTVTVFPEHLNMQGSSNEN------------- 159
D P S IP T+ ++L P + G +
Sbjct: 146 ADVCERRPVDCQHCNSQIPFTDLTKHQVLACQNLPVQCTLCGQAGIRRKDISAHIDITTG 205
Query: 160 ------FPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNK 197
PC++ GC+ K + ++E HY + H+ LL K
Sbjct: 206 DCPLTVIPCQYASFGCQFQDKRRDMVE-HYREAANHHILLLVRK 248
>gi|345329465|ref|XP_001509429.2| PREDICTED: TNF receptor-associated factor 5 [Ornithorhynchus
anatinus]
Length = 557
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + TSCGH+FC CI S ++ CPID+K++ ++F DN
Sbjct: 38 LEERYKCTFCHSVLHNPHQTSCGHRFCQHCILSLRELNNFPTCPIDKKIIQLQEVFKDNC 97
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSP-TSSFRNTSG 130
+RE+L + C C+S++ + Y+ H+ C + Q S E + ++ G
Sbjct: 98 CKREVLNLQVFCKNAPGCNSKMILGRYQDHLQQCLFQPVQCSNESCQEKVLRKDMKDHLG 157
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC 169
R K + +++Q + ENF C Y V C
Sbjct: 158 CHCKFREEKCQYCQKYVVAIDLQ-NHEENF-CPDYPVSC 194
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 7/191 (3%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+L+ + +N + L + EE + NG WK+ ++ K
Sbjct: 357 LLETYDQRLVVLKDQTRQHDAHINAHKAQLNKNEERFKLLEGTCYNGKLIWKVTDYKMKK 416
Query: 325 KE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E M+ + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 417 REAMEGRSVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMKGEFDSLLQWP 476
Query: 381 FVGRIRFTALNTSSEFSITDEI-QSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F ++ L+ S + + EI ++D N SFKRP A G F+ + + +
Sbjct: 477 FKQKVTMMLLDQSGKKNHIVEIFKADPNSSSFKRPEGEM--NIASGCPCFVDHSKLENVK 534
Query: 440 RGFLMEDDTFV 450
F+ ED F+
Sbjct: 535 NTFIKEDTLFM 545
>gi|260795019|ref|XP_002592504.1| hypothetical protein BRAFLDRAFT_68995 [Branchiostoma floridae]
gi|229277724|gb|EEN48515.1| hypothetical protein BRAFLDRAFT_68995 [Branchiostoma floridae]
Length = 503
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 271 ERMVLLEQ-SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
ER++ L+ ++ EQ +++ EL +G+ WK+ +F K + +
Sbjct: 325 ERIIALKDVALAEQDLRIQTLELTSY--------------DGILTWKIADFTRKRHDAIT 370
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
FYS CF++S GY+ C R+ ++ + ++SLF +++G D +L WPF ++
Sbjct: 371 GKTASFYSPCFFTSRTGYKMCARIYLNGDGMGKGTHVSLFFVVMRGHYDGLLRWPFRQKV 430
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F L+ ++ + D + D SF+RP + A G F+ ++ LD +
Sbjct: 431 TFMLLDQNNREHVIDAFRPDPTSSSFQRPTSDM--NIASGCPLFVPLSQ-LDSSSHAYVR 487
Query: 446 DDTFVIKTQV 455
DDT ++ V
Sbjct: 488 DDTMYLRVIV 497
>gi|432105229|gb|ELK31581.1| TNF receptor-associated factor 3 [Myotis davidii]
Length = 569
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 416 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 475
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 476 FVIMRGEYDALLPWPFRQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPSGEM--NIAS 533
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 534 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 561
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCQLVLCNPKQTECGHRFCDSCMATVLGKSASPKCTACQESIVKDKVFKDN 105
Query: 72 YTRREILENNLTCP--YKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ + H+ N C
Sbjct: 106 CCKREILALQVHCRNVGRGCAEQLALGQLLVHLRNDC 142
>gi|119571525|gb|EAW51140.1| TNF receptor-associated factor 4, isoform CRA_b [Homo sapiens]
gi|119571527|gb|EAW51142.1| TNF receptor-associated factor 4, isoform CRA_b [Homo sapiens]
Length = 477
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 188/483 (38%), Gaps = 80/483 (16%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-------TKDDI 67
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKFPHPYPQI 73
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSF 125
+ D ++L + C + + + S P + H+N T SF
Sbjct: 74 YPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLN------------------TCSF 115
Query: 126 RNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKH 182
+ IP R L+ P HL C+F GC E ++S +
Sbjct: 116 ---NVIPCPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQ 169
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNK 241
+ + ++ P + T KE +++ +++ +L
Sbjct: 170 ESVYCENKCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACP 229
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------M 280
NQ G + D C K G KL R V E+S M
Sbjct: 230 NQCGVGTVAREDLPGHLKDSCNTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAM 287
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACF 339
+ + EL + E+E+ V +GV WK+ ++ +L+E K + N +S F
Sbjct: 288 MCALVSRQRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAF 344
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 345 YTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPG 404
Query: 397 -----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D
Sbjct: 405 LAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDA 462
Query: 448 TFV 450
F+
Sbjct: 463 VFI 465
>gi|351704776|gb|EHB07695.1| TNF receptor-associated factor 2 [Heterocephalus glaber]
Length = 569
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +F K +E + +S FY+S +GY+ C RV ++ + +LSLF
Sbjct: 419 DGVFIWKISDFARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLF 478
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+++G ND +L WPF ++ L+ ++ + D + D SF+RPV+
Sbjct: 479 FVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVS 529
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C++S + +N + +L
Sbjct: 27 KLEAKYLCSACKNVLRRPFQAQCGHRYCSFCLNSILSSGPQNCTACVHEGIYEEGVSILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYE 99
F DN RRE+ C + C+ + ++ EYE
Sbjct: 87 SSSAFPDNAARREVESLPAICSNEGCTWKGTLKEYE 122
>gi|340377028|ref|XP_003387032.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 679
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFE---------LNLKQTEEIEDNVVLKLC-----N 310
L+ LV ++ ++ + ++ +++ + L+ K +E + + L L +
Sbjct: 468 LMSLVMTKITGVQAELTKKDSQIHTLQDKVAQLETTLSTKMSENEDRDFRLSLMENSNFD 527
Query: 311 GVYFWKMYNFPAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
G WK+ F ++ + + +Y +S FYSS +GY+ C R+ I + ++SLF
Sbjct: 528 GSMVWKIPQFSQRMDDAR-TGKYTSIFSLPFYSSRYGYKMCLRLYILGDGIGKGTHMSLF 586
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+++GE D+IL WPF ++ F +N I D Q D SF++P + A G
Sbjct: 587 FVVMKGEFDNILQWPFTHKVTFKLINQCGARDIMDIFQPDPLSSSFQKPKSDM--NVASG 644
Query: 426 FNNFIRVADV-LDPGRGFLMEDDTFVIKTQV 455
F+ + ++ LD GF++ DT IK +V
Sbjct: 645 CPRFVSMDELMLD---GFIL-GDTIFIKAEV 671
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 43/162 (26%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCP---IDEKVLT 63
NNK L+ ++ C C L+DA+ TSCGH C C + D K YCP +EK+ T
Sbjct: 14 NNKDILE-KYVCPKCDGILRDAVQTSCGHWLCNCCAEEIFDKKKTTPYCPRTDCEEKLTT 72
Query: 64 KDD--IFIDNYTRREILENNLTCPYKQ----------------------------CSSQL 93
+D F D + +EI ++ CP ++ C +
Sbjct: 73 EDGRPFFPDRFVCKEINRVSIMCPNRRFGCEWNDIFGKLLEHLNSCVYEKEECPHCKERF 132
Query: 94 SIPEYESHVNTCYLKYS------QPSVEDITDSPTSSFRNTS 129
S+ EY SHVN C L + QPS T P S F ++S
Sbjct: 133 SLSEYPSHVNQCPLSNTIHVASVQPS--SYTSEPGSRFIHSS 172
>gi|291410955|ref|XP_002721763.1| PREDICTED: TNF receptor-associated factor 3 isoform 2 [Oryctolagus
cuniculus]
Length = 543
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 390 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 449
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SF++P A
Sbjct: 450 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFRKPTGEM--NIAS 507
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 508 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CCKREILALQICCRNESRGCAEQLALGHLLVHLKNDC 141
>gi|224051754|ref|XP_002200611.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Taeniopygia
guttata]
Length = 567
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 257 KTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWK 316
KT G + L+ ++ +Q + I++ + +L + E N GV WK
Sbjct: 368 KTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYN-------GVLIWK 420
Query: 317 MYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGE 372
+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF +++GE
Sbjct: 421 IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE 480
Query: 373 NDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIR 431
D +L WPF ++ ++ S + D + D N SFK+P A G F+
Sbjct: 481 YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEM--NIASGCPVFV- 537
Query: 432 VADVLDPGRGFLMEDDTFVIKTQV 455
VL+ G ++DDT IK V
Sbjct: 538 AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+++ + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHLILCNPKQTECGHRFCETCMNALLRSSSPK-CTACQESIVKDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
RRE+L + C K C QLS+ + H+ T
Sbjct: 105 CRRELLALQIYCRNENKGCKEQLSLGQLLMHLRT 138
>gi|281485916|gb|ADA70519.1| TNF receptor-associated factor 6 [Phrynosoma hernandesi]
Length = 175
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + NG++ WK+ +F LK +E +S
Sbjct: 64 METQNSQMGDLKRTIRNLEEKITEMEAQQSNGIFIWKIEHFSVYLKAQEEERPVVIHSPA 123
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIR 386
FY+ GY+ C R++I + A Y+SLFIH +QGE D L WPF G IR
Sbjct: 124 FYTGKPGYKLCMRLHIQLPNDAKCANYISLFIHTMQGEYDSHLSWPFQGTIR 175
>gi|291410953|ref|XP_002721762.1| PREDICTED: TNF receptor-associated factor 3 isoform 1 [Oryctolagus
cuniculus]
Length = 568
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SF++P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFRKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CCKREILALQICCRNESRGCAEQLALGHLLVHLKNDC 141
>gi|190358578|ref|NP_001121853.1| TNF receptor-associated factor 1 [Danio rerio]
Length = 551
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
HL V E L+Q ++ + I +++ + ++ +++ +G ++W++ + K
Sbjct: 366 HLEATVAE----LQQRLVRKDILISSLQQSISAQQDVS-------YDGTFYWRVCDVSQK 414
Query: 324 LKEMKEINRYF-YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDW 379
+E + YS FY++ +G++ C R+ ++ + A ++SLF +++GE D IL W
Sbjct: 415 QREAANSQKISQYSPAFYTARYGFKVCLRLYLNGDGAGKGSHISLFFVIMKGEYDPILSW 474
Query: 380 PFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
PF ++ F L+ + + D + D + SF +PV+ A G F + + P
Sbjct: 475 PFKHKVTFFLLDQNQREHVIDAFRPDLSSMSFHQPVSDM--NVASGCPLFFPLKKLRSPK 532
Query: 440 RGFLMEDDTFVIKTQV 455
+ +DDT IK V
Sbjct: 533 HAYC-KDDTIYIKCVV 547
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 84/217 (38%), Gaps = 39/217 (17%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWI----------DVKGKNY-CPIDEKVLTK 64
++ CS C L A T CGH++C AC++ W+ KG++ D VLT
Sbjct: 39 KYLCSNCNNVLNKARQTVCGHRYCLACVN-WLVRNNKDLVCTKCKGEDSNVESDTSVLTP 97
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDITDSPT 122
+ F D +EIL+ + C + C + ++ +E H + C L + T
Sbjct: 98 NQFFNDVAINKEILDLKVHCANQGCPWRSTLKNFEDHQSQCEYALIPCNIGCGIMVQRKT 157
Query: 123 SSFRNTSGIPTNKRNSKILTVTVFPEHL----------------------NMQGSSNENF 160
+ SG P NK T + P L N +S +
Sbjct: 158 LATHLESGCPNNKTACPSCTSVLTPRELQKHVCPSSGDKKTAKTDKKQKNNQPANSKKKE 217
Query: 161 PCKFYQVGCREVFKSQA-LLEKHYDLKTSFHLELLFN 196
PC F VGC FK +++H + HL+LL +
Sbjct: 218 PCIFSDVGCP--FKGNPDKVKEHESCSHAGHLQLLLD 252
>gi|395856291|ref|XP_003800563.1| PREDICTED: TNF receptor-associated factor 5 [Otolemur garnettii]
Length = 452
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 14/193 (7%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+V+LE + +N + L + EE + NG WK+ ++ K +E +
Sbjct: 258 QRLVVLEGESNKHDEHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKKKKREAVDG 317
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 318 HTVSIFSQSFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVT 377
Query: 387 FTALNTSSEFS-ITDEIQSDKNFDSFKRP---VNFFLNKKAFGFNNFIRVADVLDPGRGF 442
L+ S + + I + ++D N SFKRP +N A G F+ +L+ +
Sbjct: 378 LMLLDQSGKKNHIMETFKADPNSSSFKRPDGEMNI-----ASGCPRFV-AHSILENVKNT 431
Query: 443 LMEDDTFVIKTQV 455
++DDT +K V
Sbjct: 432 YIKDDTLFLKVAV 444
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCIMSLRELNAVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYES 100
+RE+L + C C++++ + Y++
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRYQA 127
>gi|260795013|ref|XP_002592501.1| hypothetical protein BRAFLDRAFT_68992 [Branchiostoma floridae]
gi|229277721|gb|EEN48512.1| hypothetical protein BRAFLDRAFT_68992 [Branchiostoma floridae]
Length = 631
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 271 ERMVLLEQ-SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
ER++ L+ ++ EQ +++ + E+ + WK+ +F K + +
Sbjct: 453 ERIIALKDVALAEQDLRITSLEMTSY--------------DATLLWKIQDFTRKRHDAIT 498
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
YS CFY+S GY+ C R+ ++ + ++SLF L++G D +L WPF R+
Sbjct: 499 GKTTSIYSPCFYTSRTGYKMCARIYLNGDGMGKGSHISLFFVLMRGHFDGLLRWPFRQRV 558
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F L+ ++ + D + D SFKRP + A G F+ ++ + ++ +
Sbjct: 559 TFMLLDQNNREHVIDAFRPDPTSSSFKRPTSDM--NIASGCPLFMPLSQLESTRHAYVRD 616
Query: 446 DDTFV 450
D+ F+
Sbjct: 617 DEIFL 621
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 10 KLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY---CPID----EKVL 62
++ ++ ++ CS C L++ T CGH++C +C+D + G CP D + +L
Sbjct: 54 EVRVEEKYLCSACRLVLREPFQTYCGHRYCKSCLDEIFRLPGIQMCKQCPQDTQSEDSLL 113
Query: 63 TKDDIFIDNYTRREILENNLTCP-YKQCSSQLSIPEYESHVNTC 105
+D F D +R+I E + C C + +Y+ H C
Sbjct: 114 KRDQAFPDRAIKRDIGELPVKCGNADACEWKGKAHQYDEHQENC 157
>gi|45383686|ref|NP_989550.1| TNF receptor-associated factor 5 [Gallus gallus]
gi|27923036|dbj|BAC55959.1| tumor necrosis factor receptor associated factor-5 [Gallus gallus]
gi|53133404|emb|CAG32031.1| hypothetical protein RCJMB04_16f1 [Gallus gallus]
Length = 557
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
L++ +R+ +LE + +++N + L + EE + NG WK+ ++ K
Sbjct: 357 LMETYDQRLAVLESQSSKHDLQINIHKAQLNKNEERFKLLEGTCYNGKLIWKITDYKMKK 416
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
KE E +S FY+S GYR C R ++ + + ++SL+ +++GE D +L WP
Sbjct: 417 KEAVEGRVLSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHVSLYFVVMRGEFDSLLPWP 476
Query: 381 FVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F ++ L+ T + I + ++D N SFKRP A G F+ VL+
Sbjct: 477 FKQKVTLMLLDQTGKKNHIVEVFRADPNSSSFKRPDGEM--NIASGCPRFV-PHTVLENT 533
Query: 440 RGFLMEDDTFVIKTQV 455
+ + DDT +K V
Sbjct: 534 KNTYVRDDTLFLKVVV 549
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI + + CP+D++ + ++F DN
Sbjct: 38 LEDRYKCAYCHSVLHNPHQTGCGHRFCQQCILTLRGLNAVPTCPVDKETIKMHEVFKDNC 97
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQ 111
+RE+L + C C+S++ + Y+ H+ C + Q
Sbjct: 98 CKREVLNLYVFCKNLPDCNSKIILGRYQEHLQQCLFESVQ 137
>gi|444716584|gb|ELW57428.1| TNF receptor-associated factor 1 [Tupaia chinensis]
Length = 415
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+ L++++ ++ + E +L+ EE +G + WK+ N + E
Sbjct: 233 QRVTELQETLAQKDEALGKLEQSLRLMEEAS-------FDGTFLWKITNVTKRCHE-SAC 284
Query: 331 NRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRI 385
R +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++
Sbjct: 285 GRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKV 344
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F L+ ++ D + D + SF+RP + A G F ++ + P + ++
Sbjct: 345 TFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSRLQSPKHAY-VK 401
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 402 DDTMFLKCIV 411
>gi|350589168|ref|XP_003482803.1| PREDICTED: TNF receptor-associated factor 5 [Sus scrofa]
Length = 558
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + G WK+ ++ KL
Sbjct: 358 LLETNDQRLVVLEGETNKHDAHINIHKAQLSKNEERFKLLESACYTGKLIWKVTDY--KL 415
Query: 325 KEMKEINRY---FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILD 378
++ + ++ + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L
Sbjct: 416 RKREALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQ 475
Query: 379 WPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLD 437
WPF R+ L+ S + + I + ++D N SFKRP A G F+ L+
Sbjct: 476 WPFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLE 532
Query: 438 PGRGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 533 SAKNTYIKDDTLFLKVAV 550
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R+ C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYRCAFCRSVLHNPHQTGCGHRFCQDCILSLRELNAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQ 111
+RE+L + C C++++ + Y+ H+ C + Q
Sbjct: 99 CKREVLNLYVFCKNAPGCTAKIILGRYQDHLQQCLFQAVQ 138
>gi|4929964|pdb|1CA9|A Chain A, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Peptide From Tnf-R2
gi|4929965|pdb|1CA9|B Chain B, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Peptide From Tnf-R2
gi|4929966|pdb|1CA9|C Chain C, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Peptide From Tnf-R2
gi|4929967|pdb|1CA9|D Chain D, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Peptide From Tnf-R2
gi|4929968|pdb|1CA9|E Chain E, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Peptide From Tnf-R2
gi|4929969|pdb|1CA9|F Chain F, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A Peptide From Tnf-R2
Length = 192
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +F K +E +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 42 DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLF 101
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+++G ND +L WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 102 FVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 152
>gi|405959310|gb|EKC25362.1| TNF receptor-associated factor 4 [Crassostrea gigas]
Length = 389
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 24/180 (13%)
Query: 293 NLKQTEEIEDNVVLKLCNGVY----------FWKMYNFPAKLKEMKEINRYFYSACFYSS 342
+L +T++ + + +LCN +Y WK+ N+ K E + S FY++
Sbjct: 208 DLSKTQQTQ---ITQLCNALYSLTHITDGEFIWKISNYKQKFLESAYKSVELVSEPFYTA 264
Query: 343 CFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF--- 396
+GY+ V ++ A +YLS++I ++ GE D+IL+WPF+ I F+ + + ++
Sbjct: 265 RYGYKMAASVFLNGNGAGEGKYLSVYIKILPGEYDNILEWPFILPISFSIYDQNIDYDLR 324
Query: 397 -SITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+IT+ D + F++PV + A GF V+ + R ++ +DD+ +IK +V
Sbjct: 325 ANITESFVPDPTWKHFQKPVK---DTGALGFGYPKFVSHEILKTRDYI-KDDSIIIKVKV 380
>gi|301763601|ref|XP_002917221.1| PREDICTED: TNF receptor-associated factor 5-like [Ailuropoda
melanoleuca]
gi|281340323|gb|EFB15907.1| hypothetical protein PANDA_005426 [Ailuropoda melanoleuca]
Length = 558
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + NG WK+ ++ K
Sbjct: 358 LLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKK 417
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 418 REALDGHTLSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 477
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
F R+ L+ S + + I + ++D + SFKRP A G F+ L+
Sbjct: 478 FRQRVTLMLLDQSGKKNHIMETFKADPSSSSFKRPDGEM--NIASGCPRFV-AHSTLENA 534
Query: 440 RGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 535 KNTYIKDDTVFLKVAV 550
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNAVPLCPVDKEVIRSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVED 116
+RE+L + C C++++ + ++ H+ C + Q S E+
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRFQDHLQQCLFQAVQCSNEN 143
>gi|281485914|gb|ADA70518.1| TNF receptor-associated factor 6 [Phrynosoma asio]
Length = 183
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSAC 338
M Q ++ + + ++ EE + + NG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQSNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGENDDILDWPFVGRIR 386
FY+ GY+ C R++I + A Y+SLFIH +QGE D L WPF G IR
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNVAKCANYISLFIHTMQGEYDSHLSWPFQGTIR 183
>gi|371927231|gb|AEX58664.1| TNF receptor associated factor 6 [Channa punctata]
Length = 220
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 298 EEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISR 356
EE ++ + C+G++ W++ F A L+ + + +S FY+ GYR C R+++
Sbjct: 102 EETVKDLEAQHCHGIFIWRLKGFSAHLRNQEAGLPVVEHSPGFYTGRPGYRLCLRLHLQT 161
Query: 357 EDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK 406
A Y+SLF+H +QG D L WPF G IR L+ E E+ K
Sbjct: 162 PMAPRCSNYISLFVHTMQGAFDGQLTWPFQGTIRLAILDQGPEGQHHMEVMETK 215
>gi|291236684|ref|XP_002738269.1| PREDICTED: TNF receptor-associated factor 1-like [Saccoglossus
kowalevskii]
Length = 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 12/184 (6%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKE-MKEINRYF 334
LE+KIK + + LK E ++ ++ +GV WK+ +F K E +
Sbjct: 184 LERKIKSQDRIIALKDVYLAEQDLRIQSLEMASYDGVLVWKITDFNRKRNESISGRTTSI 243
Query: 335 YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS CF++S GY+ C R+ ++ + ++SLF +++G D +L WPF+ ++ F L+
Sbjct: 244 YSPCFFTSRHGYKMCARIYLNGDGMGKGNHISLFFVIMKGTFDGLLRWPFMQKVTFMILD 303
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 451
++ + D + +SF+RP A G F+ ++ LD R ++DD I
Sbjct: 304 QKNQDHVIDSFRPTTTSNSFQRPTGDM--NIASGCPLFMPLSQ-LDSRRHAYVKDDCMFI 360
Query: 452 KTQV 455
K V
Sbjct: 361 KVIV 364
>gi|326921070|ref|XP_003206787.1| PREDICTED: TNF receptor-associated factor 3-like isoform 2
[Meleagris gallopavo]
Length = 542
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 389 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 448
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ S + D + D N SFK+P A
Sbjct: 449 FVIMRGEYDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 506
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 507 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 534
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+++ + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHFILCNPKQTECGHRFCETCMNALLSTPSPK-CTACQESIVKDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
RRE+L + C K C QLS+ + H+ T
Sbjct: 105 CRRELLALQIYCRNENKGCKEQLSLGQLLMHLKT 138
>gi|395536184|ref|XP_003770100.1| PREDICTED: TNF receptor-associated factor 4 [Sarcophilus harrisii]
Length = 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-E 329
E V L +M+ + EL L+ ++E+ V C+GV WK+ + +L+E K
Sbjct: 171 EESVKLHLAMMCALVSRQRQEL-LELRRDVEELSVG--CDGVLIWKIGGYGRRLQEAKAR 227
Query: 330 INRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIR 386
N +S FY+ +GY+ + + +LSL+I ++ G D++L+WPF R+
Sbjct: 228 PNHECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVT 287
Query: 387 FTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLD 437
F+ L+ S +T+ D ++ +F++P + + FG+ FI D+
Sbjct: 288 FSLLDQSDPAVTKPQHVTETFHPDPHWKNFQKPGPWRGSVDESALGFGYPKFISHQDIRK 347
Query: 438 PGRGFLMEDDTFV 450
R ++ +D F+
Sbjct: 348 --RNYVRDDAVFI 358
>gi|340385832|ref|XP_003391412.1| PREDICTED: TNF receptor-associated factor 2-like, partial
[Amphimedon queenslandica]
Length = 340
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 286 KVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY--FYSACFYSSC 343
++ E + Q E I + +G WK+ F ++ + + +Y +S FYSS
Sbjct: 168 QICTLEDKVAQLETITMSFCYGNFDGSMVWKIPQFSQRMDDAR-TGKYTSIFSLPFYSSR 226
Query: 344 FGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITD 400
+GY+ C R+ I + ++SLF +++GE D +L WPF ++ F +N S+ +
Sbjct: 227 YGYKMCLRLYILGDGIGKGTHMSLFFVVMKGEYDALLPWPFTHKVTFKLMNQCSKRDVVK 286
Query: 401 EIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
Q D SF++P + A G F+ ++++ G + DDT IK +V T
Sbjct: 287 AFQPDPLSSSFQKPKSDM--NVASGCPRFVSKNELMEGG---FIVDDTIFIKVKVDTAT 340
>gi|327286777|ref|XP_003228106.1| PREDICTED: TNF receptor-associated factor 2-like [Anolis
carolinensis]
Length = 307
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRYF-YSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G WK+ + +E + NR YS FY+S +GY+ C +V ++ E +LSLF
Sbjct: 157 DGCLLWKIPEVGLRSREARTGNRPACYSPAFYTSRYGYKVCLKVFLNGEGTGTGTHLSLF 216
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+ L++GE D L WPF ++ FT L+ ++ I+ + ++ SF+RPVN A G
Sbjct: 217 LVLMKGEYDFQLKWPFRHKVTFTLLDQDNKQHISTSFRPLESSSSFQRPVNE--TNVASG 274
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F + +VL R + +DT I+ +
Sbjct: 275 LPEFCPL-NVLHSPRTSYICNDTLAIQAVI 303
>gi|363741321|ref|XP_003642477.1| PREDICTED: TNF receptor-associated factor 4 [Gallus gallus]
Length = 460
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 17/155 (10%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRV----NISREDAQYLSL 364
+G WK+ ++ KL+E K + Y F+S FY+ +GYR N S E++ +LS+
Sbjct: 297 DGTLIWKISDYARKLQEAKTRSNYEFFSPPFYTHKYGYRLQVSAFLNGNGSGENS-HLSV 355
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRP----V 415
+I ++ GE D++L+WPF R+ F+ L+ S IT+ D N+ +F++P
Sbjct: 356 YIRVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHITETFHPDPNWKNFQKPGASRG 415
Query: 416 NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ + FG+ FI D+ R ++ ++ F+
Sbjct: 416 SLDESTLGFGYPKFISHEDIKK--RNYVRDNAIFI 448
>gi|449680999|ref|XP_002164212.2| PREDICTED: TNF receptor-associated factor 3-like [Hydra
magnipapillata]
Length = 464
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 105/481 (21%), Positives = 194/481 (40%), Gaps = 116/481 (24%)
Query: 17 FECSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
+C +C L+ I T CGH+FC +CI + ++G+ C +D +++ + +F+D +R
Sbjct: 56 LKCPVCFLALRQPIQTEECGHRFCESCIKNIKRIEGQLLCSLDRQMIDLNTVFLDKAAKR 115
Query: 76 EILENNLTCPY--KQCSSQLSIPEYESHVNTCY----------LKYSQPSVEDITDSPT- 122
IL + C Y + C I + ++ +Y + + E I D T
Sbjct: 116 AILSLPIRCRYHERNCEWIGDISTIDVFLDKAAKRAILSLPIRCRYHERNCEWIGDISTI 175
Query: 123 -SSFRNTSGIPTNKRNSK--ILTVTVF---PEHLNMQGSSNENFPCKFYQVGCREVFK-S 175
+ + + NS+ I + T + P+H+ + N + C++ ++ C FK +
Sbjct: 176 DDHLKECGFVDVSCPNSQCQIASFTFYIQMPKHVENECPVNVQY-CEYAKIKCD--FKGT 232
Query: 176 QALLEKHYDLKTSFHLEL-------LFNKYCSDGSQSTNTPSHGRQDTSNQKE--IEAYL 226
Q+ + H + HL L L NK+ Q+TN + D +KE +EA
Sbjct: 233 QSQRDAHVISSANLHLTLSIEKITKLENKFSYQVEQATNLAI--KYDALKKKEDLLEA-- 288
Query: 227 MKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
L++ V ++ LE ++ K
Sbjct: 289 --------------------------------------LIRTVERQISSLENKLVNIDTK 310
Query: 287 VNNFELNLKQTEEIEDNVVLKLCNGVYFWKM----YNFPAKLKEMKEINRYFYSACFYSS 342
FE L + E Y W + + + K MK++N S FYS+
Sbjct: 311 SCLFESRLPKNE--------------YLWCLDSIDFLINKEKKPMKDLN--ICSTPFYSA 354
Query: 343 CFGYRFCTRV---NISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT 399
FGY+ ++ + + + LF+++++GE D +L+WPF ++ + L+ S
Sbjct: 355 PFGYKLSMQIYLNGLGKYRGTNIILFLNIIKGEYDSLLEWPFTKMVKLSLLDQS------ 408
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGR-----GFLMEDDTFVIKTQ 454
E + K F +N NK +++I+ V P + G+LME + +IK +
Sbjct: 409 -EARDHKVF-VIDPKINENFNKA----DSYIKRVGVTIPLKLLTCPGYLME-NKIIIKCE 461
Query: 455 V 455
V
Sbjct: 462 V 462
>gi|170292124|pdb|2ECI|A Chain A, Solution Structure Of The Ring Domain Of The Human Tnf
Receptor-Associated Factor 6 Protein
Length = 86
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 22 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 80
Query: 73 TRREIL 78
+REIL
Sbjct: 81 AKREIL 86
>gi|301617211|ref|XP_002938036.1| PREDICTED: TNF receptor-associated factor 3-like [Xenopus
(Silurana) tropicalis]
Length = 561
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 408 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 467
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ S + D + D N SFK+P A
Sbjct: 468 FVIMRGEYDALLPWPFKQKVSLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 525
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 526 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 553
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+++ + C E +TKD +F DN
Sbjct: 42 VEEKYKCEKCRLVLCNPRQTECGHRFCETCMNAILSSTSPQ-CMACEDNITKDKVFKDNC 100
Query: 73 TRREILENNLTC 84
RRE+L + C
Sbjct: 101 CRREVLALQMFC 112
>gi|4929955|pdb|1CA4|A Chain A, Structure Of Tnf Receptor Associated Factor 2 (Traf2)
gi|4929956|pdb|1CA4|B Chain B, Structure Of Tnf Receptor Associated Factor 2 (Traf2)
gi|4929957|pdb|1CA4|C Chain C, Structure Of Tnf Receptor Associated Factor 2 (Traf2)
gi|4929958|pdb|1CA4|D Chain D, Structure Of Tnf Receptor Associated Factor 2 (Traf2)
gi|4929959|pdb|1CA4|E Chain E, Structure Of Tnf Receptor Associated Factor 2 (Traf2)
gi|4929960|pdb|1CA4|F Chain F, Structure Of Tnf Receptor Associated Factor 2 (Traf2)
gi|7546322|pdb|1D00|A Chain A, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 5-Residue Cd40 Peptide
gi|7546323|pdb|1D00|B Chain B, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 5-Residue Cd40 Peptide
gi|7546324|pdb|1D00|C Chain C, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 5-Residue Cd40 Peptide
gi|7546325|pdb|1D00|D Chain D, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 5-Residue Cd40 Peptide
gi|7546326|pdb|1D00|E Chain E, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 5-Residue Cd40 Peptide
gi|7546327|pdb|1D00|F Chain F, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 5-Residue Cd40 Peptide
gi|7546328|pdb|1D00|G Chain G, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 5-Residue Cd40 Peptide
gi|7546329|pdb|1D00|H Chain H, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A 5-Residue Cd40 Peptide
gi|15988519|pdb|1D0J|A Chain A, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A M4-1bb Peptide
gi|15988520|pdb|1D0J|B Chain B, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A M4-1bb Peptide
gi|15988521|pdb|1D0J|C Chain C, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A M4-1bb Peptide
gi|15988522|pdb|1D0J|D Chain D, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A M4-1bb Peptide
gi|15988523|pdb|1D0J|E Chain E, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A M4-1bb Peptide
gi|15988524|pdb|1D0J|F Chain F, Structure Of Tnf Receptor Associated Factor 2 In Complex
With A M4-1bb Peptide
Length = 168
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +F K +E +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 18 DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLF 77
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+++G ND +L WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 78 FVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 128
>gi|431839304|gb|ELK01231.1| TNF receptor-associated factor 3 [Pteropus alecto]
Length = 593
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 440 DGVLIWKIRDYRRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 499
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 500 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 557
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 558 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 585
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 41 VEDKYKCEKCRLVLCNPKQTECGHRFCETCMAAVLSSSSPK-CTACQESIIKDKVFKDNC 99
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 100 CKREILALQIYCRNESRGCAEQLTLGHLLVHLRNDC 135
>gi|348539592|ref|XP_003457273.1| PREDICTED: TNF receptor-associated factor 3-like [Oreochromis
niloticus]
Length = 584
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NG WK+ ++ + ++ YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 431 NGTLIWKIRDYKRRKQDAVAAKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 490
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ S + D + D N SF+RPV A
Sbjct: 491 FVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPNSSSFRRPVAEM--NIAS 548
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ +VL+ G ++DDT IK V
Sbjct: 549 GCPLFVS-QNVLE--TGTYIKDDTIFIKVTV 576
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
++ C C L T CGH+FC +CI + + CP D + L +D IF D R
Sbjct: 66 KYCCEACRLVLCQPRQTECGHRFCNSCICDILS-RPNPVCPADMEPLFRDKIFKDVCCHR 124
Query: 76 EILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
EI+ + C + C Q+S+ + H+N C
Sbjct: 125 EIMSLKVYCRSEANGCQEQMSLQQIPDHLNVC 156
>gi|355725856|gb|AES08686.1| TNF receptor-associated factor 3 [Mustela putorius furo]
Length = 326
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 173 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 232
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 233 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 290
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 291 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 318
>gi|440912014|gb|ELR61625.1| TNF receptor-associated factor 5 [Bos grunniens mutus]
Length = 580
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + NG WK+ ++ K
Sbjct: 379 LLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLESACYNGKLIWKVTDYKLKK 438
Query: 325 KEMKEINRY-FYSACFYSS--CFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILD 378
KE + + +S FY+S C GYR C R ++ + + +LSL+ +++GE D +L
Sbjct: 439 KEALDGHTVSIFSQPFYTSRRC-GYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQ 497
Query: 379 WPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLD 437
WPF R+ L+ S + + I + ++D N SFKRP A G F+ L+
Sbjct: 498 WPFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLE 554
Query: 438 PGRGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 555 NAKNTYIKDDTLFLKVAV 572
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI + ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCHQCILALRELDTVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYE 99
+RE+L + C +C++++ + Y+
Sbjct: 99 CKREVLNLYVFCKNAPRCNAKIILGRYQ 126
>gi|301610388|ref|XP_002934728.1| PREDICTED: TNF receptor-associated factor 5-like [Xenopus
(Silurana) tropicalis]
Length = 561
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLF 365
NG WK+ ++ K +E E +S FY+S GYR C R ++ + + +LSL+
Sbjct: 399 NGKLIWKITDYERKKREAMEGRAVSIFSQHFYTSWCGYRLCARAYLNGDGSGKGSFLSLY 458
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D IL WPF ++ L+ S + + ITD ++D N SFKRP + A
Sbjct: 459 FVVMKGEFDSILLWPFKQKVTLMLLDQSGKKNHITDVFRADPNSSSFKRPDSEM--NIAS 516
Query: 425 GFNNFIRVADVLDPGRG 441
G F A + +P G
Sbjct: 517 GCPRFASHAQLENPKNG 533
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L R++C+ C L + T CGH+FC CI + I++ CPID + + +IF DN
Sbjct: 38 LQDRYKCASCHLVLHNPHQTGCGHRFCEKCISNLIELSETPQCPIDMENIKSHEIFKDNC 97
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTC 105
+RE+L + C C ++ + Y+ H+ C
Sbjct: 98 CKREVLNLLVYCKNSPACDVKVMLGRYQEHLGQC 131
>gi|260830174|ref|XP_002610036.1| hypothetical protein BRAFLDRAFT_237984 [Branchiostoma floridae]
gi|229295399|gb|EEN66046.1| hypothetical protein BRAFLDRAFT_237984 [Branchiostoma floridae]
Length = 532
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
LD R+ C +C+ L++ T CGH++C CI + CPID + LT+D++F D +
Sbjct: 11 LDDRYRCPVCILILREPRQTGCGHRYCNYCITLKLREPSPK-CPIDGEELTQDEVFPDLF 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
+REIL + + C +K+ C + + E+H+N C
Sbjct: 70 CKREILMSKVYCRFKKNGCQEIVLLRNLEAHINEC 104
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G WK+ ++ + E + YS FY+S FGY+ C RV ++ + ++SLF
Sbjct: 379 DGTLLWKIKDYTRRKHEAVTGRTLSLYSQPFYTSQFGYKMCARVYLNGDGMGKGTHMSLF 438
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVN 416
+++GE D +L WPF ++ L+ ++D + D SFKRP +
Sbjct: 439 FVVMRGEYDALLPWPFRQKVTLMLLDQDQGRRHLSDTFRPDPTSSSFKRPTS 490
>gi|326936062|ref|XP_003214077.1| PREDICTED: TNF receptor-associated factor 4-like, partial
[Meleagris gallopavo]
Length = 184
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 82/156 (52%), Gaps = 17/156 (10%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRV----NISREDAQYLS 363
+G WK+ ++ KL+E K + Y F+S FY+ +GY+ N S E++ +LS
Sbjct: 20 SDGTLIWKISDYARKLQEAKTRSNYEFFSPPFYTHKYGYKLQVSAFLNGNGSGENS-HLS 78
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRP---- 414
++I ++ GE D++L+WPF R+ F+ L+ S IT+ D N+ +F++P
Sbjct: 79 VYIRVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHITETFHPDPNWKNFQKPGASR 138
Query: 415 VNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
V+ + FG+ FI D+ R ++ ++ F+
Sbjct: 139 VSLDESTLGFGYPKFISHEDIKK--RNYVRDNAIFI 172
>gi|291224250|ref|XP_002732118.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 489
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G+ WK+ +F K ++ + YS F++S GY+ C R+ ++ + ++SLF
Sbjct: 337 DGILLWKITDFARKRRDAISGRTPSIYSPYFFTSHHGYKLCARLYLNGDGMGKGNHVSLF 396
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+++GE D IL WPF ++ L+ S+ + D + D + +SFKRP A G
Sbjct: 397 FVVMKGEYDAILKWPFRQKVTLMWLDQSNREHVIDAFRPDPSSNSFKRPTGDM--NIASG 454
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ ++ V+D R ++DDT I+ V
Sbjct: 455 CPLFMPLS-VIDNRRCEYVKDDTAFIRIIV 483
>gi|410929517|ref|XP_003978146.1| PREDICTED: TNF receptor-associated factor 2-like [Takifugu
rubripes]
Length = 568
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 88/166 (53%), Gaps = 4/166 (2%)
Query: 255 SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF 314
SC T + +L +++ +L + + + V+ +L++ + +E + +GV+
Sbjct: 363 SCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEIDEKMRELSAATYDGVFV 422
Query: 315 WKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQ 370
WK+ +F K ++ + +S+ FY+S +GY+ C R+ ++ + +LSLF +++
Sbjct: 423 WKISDFTKKRQDAVAGRAPAMFSSAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMR 482
Query: 371 GENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
G +D +L WPF ++ L+ ++ I D + D + SF+RPV+
Sbjct: 483 GHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVS 528
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVL 62
NL+ + C C + L+ + CGH+FC+ C + G C I E +L
Sbjct: 27 NLENKHLCKSCQKVLRRPLQAQCGHRFCSFCFHKIVSA-GPQTCSACISEDLFEEPASIL 85
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ CP + C +I E+E+ H ++C
Sbjct: 86 KLGGAFPDNAARREVEALAAVCPNEGCIWTGTIKEFEARHEDSC 129
>gi|355725879|gb|AES08692.1| TNF receptor-associated factor 5 [Mustela putorius furo]
Length = 351
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + NG WK+ ++ K
Sbjct: 151 LLETNDQRLVVLEGETSKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKK 210
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
+E + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WP
Sbjct: 211 REALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 270
Query: 381 FVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRP---VNFFLNKKAFGFNNFIRVADVL 436
F R+ L+ S + + I + ++D + SFKRP +N A G F+ L
Sbjct: 271 FRQRVTLMLLDQSGKKNHIMETFKADPSSSSFKRPDGEMNI-----ASGCPRFV-AHSTL 324
Query: 437 DPGRGFLMEDDTFVIKTQV 455
+ + ++DDT +K V
Sbjct: 325 ENAKNTYIKDDTMFLKVAV 343
>gi|327262485|ref|XP_003216054.1| PREDICTED: TNF receptor-associated factor 5-like [Anolis
carolinensis]
Length = 625
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 170/401 (42%), Gaps = 40/401 (9%)
Query: 67 IFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFR 126
I + + RR+ E L CP+ C+ + + E E H+ C P+VE D P +
Sbjct: 245 INVKTHERRDCPEYPLICPHG-CTQTILMKEAEEHILVC------PAVE--IDCPYKQY- 294
Query: 127 NTSGIPTNKRNSKILTV--TVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
G P + K+L EH+ N + E++K+ +H +
Sbjct: 295 ---GCPAKIKRGKVLEHENIYLREHMLQILDRNSKLEDQI-----SELYKNL----EHKE 342
Query: 185 LKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQA 244
+K HL + K + Q T S ++ + + ++ K+ E+++ Q
Sbjct: 343 IKIQ-HLADMVKKCEKEFRQFTQLYSKNNNLLASTQTLAIHIDKSACLETQVR--QLVQM 399
Query: 245 GDDKSSEGDC-----SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEE 299
+ + S+ D + + L+ +R+V+LE + I + + L + EE
Sbjct: 400 ANQQQSKFDLRPLLETVENIKQKVAFLESYEQRLVVLEDLSSQHDIHLGLHKAQLNKNEE 459
Query: 300 IEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED 358
+ NG WK+ ++ K KE E + +S FY+S GYR R ++ +
Sbjct: 460 RFKLLEGTSYNGKLIWKIVDYKTKKKEAVEGSCLSIFSQPFYTSRCGYRLSARAYLNGDG 519
Query: 359 A---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRP 414
+ ++SL+ +++GE D +L WPF ++ L+ S + + I + ++D N SFKRP
Sbjct: 520 SGKGTHVSLYFVVMRGEFDSLLPWPFRQKVTLMLLDQSGKKNHIVETFKADPNSSSFKRP 579
Query: 415 VNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ +L+ + ++DDT +K V
Sbjct: 580 EGEM--NVASGCPRFVP-HTLLENAKSTYIKDDTIFLKVVV 617
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++++ ++F DN
Sbjct: 106 LEDRYKCTHCHLVLHNPHQTGCGHRFCQRCIASLRELSVIPTCPVDKEIIKPHEVFKDNC 165
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQ 111
+RE+L + C C+++ S+ Y+ H+ C + Q
Sbjct: 166 CKREVLNLQVYCRNSPACNAKTSLGRYQDHLQQCLFESVQ 205
>gi|340384825|ref|XP_003390911.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 475
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISRED---AQYLSL 364
+G WK+ F ++ + + +Y +S FYSS GY+ C + I + ++SL
Sbjct: 323 DGSMVWKIPQFSQRMDDAR-TGKYTSIFSPPFYSSRNGYKICLCLYILGDGIGKGTHMSL 381
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
F L++GE D+IL WPF ++ F +N I D Q D SF++P + A
Sbjct: 382 FFVLMKGEFDNILQWPFTHKVTFKLINQCGARDIMDIFQPDPLSSSFQKPRSDM--NVAS 439
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
G F+ + +++ +G + DDT IK +V T
Sbjct: 440 GCPRFVSMNELM---QGGFIVDDTIFIKVKVDTAT 471
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 36/151 (23%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYC----PIDEKVLT 63
NNK N++ ++ C C L+DA+ TSCGH C C + D K C E++ T
Sbjct: 14 NNKDNIE-KYVCPKCDGILRDAVQTSCGHWLCNDCAEEIFDKKETTPCCPRTECGEELTT 72
Query: 64 KDD--IFIDNYTRREILENNLTCP------------------------YKQ-----CSSQ 92
++ F+D + R+EI ++ CP Y++ C
Sbjct: 73 EEGRPFFLDRFVRKEINRFSIMCPNCKFGCDWNGKISEFYAEHLGSCVYEKEECPHCKKG 132
Query: 93 LSIPEYESHVNTCYLKYSQPSVEDITDSPTS 123
LS+ EY+SHVN C +Y Q S I S
Sbjct: 133 LSLSEYQSHVNQCLTEYEQSSGRPIIQGSRS 163
>gi|5822333|pdb|1QSC|A Chain A, Crystal Structure Of The Traf Domain Of Traf2 In A Complex
With A Peptide From The Cd40 Receptor
gi|5822334|pdb|1QSC|B Chain B, Crystal Structure Of The Traf Domain Of Traf2 In A Complex
With A Peptide From The Cd40 Receptor
gi|5822335|pdb|1QSC|C Chain C, Crystal Structure Of The Traf Domain Of Traf2 In A Complex
With A Peptide From The Cd40 Receptor
Length = 191
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +F K +E +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 41 DGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKXCLRIYLNGDGTGRGTHLSLF 100
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
+ +G ND +L WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 101 FVVXKGPNDALLRWPFNQKVTLXLLDQNNREHVIDAFRPDVTSSSFQRPVN 151
>gi|185136163|ref|NP_001117865.1| tumor necrosis factor receptor associated factor 2 [Oncorhynchus
mykiss]
gi|31620987|emb|CAD69021.2| tumor necrosis factor receptor associated factor 2 [Oncorhynchus
mykiss]
Length = 526
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 291 ELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFC 349
+L L +T++ + +GV+ WK+ +F + ++ + +S FYSS +GY+ C
Sbjct: 357 DLQLAETDQTLRELQFCTFDGVFVWKIADFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMC 416
Query: 350 TRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDK 406
R+ ++ + +LSLF +++G+ D +L WPF ++ L+ ++ I D + D
Sbjct: 417 LRLYLNGDGTGRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDV 476
Query: 407 NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
SF RP N +N A G F +A + G+ + DDT IK V
Sbjct: 477 ISTSFLRP-NREMN-IASGCPLFCPLAKL--AGKSSYLRDDTIFIKAIV 521
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI------- 57
P + ++++ +++C C + L+ + CGH+FC C + G C
Sbjct: 17 PQSVLAVSVEAKYQCQQCHQVLRKPVQAQCGHRFCVHCF-KLLTSSGPKPCEACRQEEIY 75
Query: 58 --DEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
+ +L ++ F DN REI C + CS I EYE+ H C
Sbjct: 76 EEPQSILNSNEAFPDNAAGREIASLPAKCISEGCSWTGCIKEYEAQHEGKC 126
>gi|326368646|gb|ADZ55454.1| TNF receptor-associated factor 3 [Cyprinus carpio]
Length = 573
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NG WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 420 NGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 479
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ + + D + D N SF+RP A
Sbjct: 480 FVVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEM--NIAS 537
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 538 GCPLFV-AQTVLE--NGTYIKDDTIFIKVTV 565
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYT 73
+ ++ C C L T CGH+FC +CI + K CP D + L +D IF D
Sbjct: 51 EAKYRCESCRHVLCKPRQTECGHRFCESCITDLLS-KPNPVCPADLEPLFEDKIFRDVCC 109
Query: 74 RREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
REI+ + C ++ C Q+S+ + H+ C
Sbjct: 110 NREIMALKVYCRSEKNGCKEQMSLQQVMDHLEVC 143
>gi|410898706|ref|XP_003962838.1| PREDICTED: TNF receptor-associated factor 3-like isoform 1
[Takifugu rubripes]
Length = 574
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NG WK+ ++ + +E YS FY+ FGY+ C R+ ++ + +LSLF
Sbjct: 421 NGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCARIYLNGDGMGKGTHLSLF 480
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSS-EFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ + + D + D N SF+RPV A
Sbjct: 481 FVVMRGEYDALLPWPFKQKVTLMLMDQGPLKKHLGDAFKPDPNSSSFRRPVVEM--NIAS 538
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ + VL+ G ++DDT IK V
Sbjct: 539 GCPLFVSQS-VLETGS--YIKDDTIFIKVTV 566
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++ C C L T CGH+FC +CI+ + CP D + L KD +F D
Sbjct: 54 LEAKYCCESCRLVLCQPRQTECGHRFCQSCINDILS-HPNPVCPADTEPLFKDKVFRDVC 112
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
REI+ + C + C Q+ + + H+NTC
Sbjct: 113 CHREIMALKVYCRSEANGCQEQMRLQQIPDHLNTC 147
>gi|444518340|gb|ELV12102.1| Serine/threonine-protein kinase Nek8 [Tupaia chinensis]
Length = 1143
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 980 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 1039
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 1040 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 1099
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 1100 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 1131
>gi|326667843|ref|XP_001924047.2| PREDICTED: TNF receptor-associated factor 2 [Danio rerio]
Length = 575
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +F K ++ + +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 425 DGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLF 484
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+++G +D +L WPF ++ L+ ++ I D + D + SF+RPV+ A G
Sbjct: 485 FVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDM--NIASG 542
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F ++ LD ++ DDT IK V
Sbjct: 543 CPLFCPLSK-LDSKNSYI-RDDTIFIKAIV 570
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ + C+ICL+ L+ CGH+FC+ C + + G C I E +L
Sbjct: 28 LEDKHLCNICLKILRRPFQAQCGHRFCSYCFNKAVS-SGPQKCSACIKEDIFEEPTSILK 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
+ F DN +RE+ C ++CS +I EYE+ H C
Sbjct: 87 QGCAFPDNAAKREVEALEAVCINEECSWTGTIKEYEANHEGKC 129
>gi|410898708|ref|XP_003962839.1| PREDICTED: TNF receptor-associated factor 3-like isoform 2
[Takifugu rubripes]
Length = 580
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NG WK+ ++ + +E YS FY+ FGY+ C R+ ++ + +LSLF
Sbjct: 427 NGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCARIYLNGDGMGKGTHLSLF 486
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSS-EFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ + + D + D N SF+RPV A
Sbjct: 487 FVVMRGEYDALLPWPFKQKVTLMLMDQGPLKKHLGDAFKPDPNSSSFRRPVVEM--NIAS 544
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ + VL+ G ++DDT IK V
Sbjct: 545 GCPLFVSQS-VLETGS--YIKDDTIFIKVTV 572
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++ C C L T CGH+FC +CI+ + CP D + L KD +F D
Sbjct: 60 LEAKYCCESCRLVLCQPRQTECGHRFCQSCINDILS-HPNPVCPADTEPLFKDKVFRDVC 118
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
REI+ + C + C Q+ + + H+NTC
Sbjct: 119 CHREIMALKVYCRSEANGCQEQMRLQQIPDHLNTC 153
>gi|260795023|ref|XP_002592506.1| hypothetical protein BRAFLDRAFT_68997 [Branchiostoma floridae]
gi|229277726|gb|EEN48517.1| hypothetical protein BRAFLDRAFT_68997 [Branchiostoma floridae]
Length = 482
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 22/190 (11%)
Query: 271 ERMVLLEQ-SMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MK 328
ER++ L+ ++ EQ +++ + E+ + WK+ +F K + +
Sbjct: 304 ERIIALKDVALAEQDLRITSLEMTSY--------------DATLLWKIQDFTRKRHDAIT 349
Query: 329 EINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRI 385
YS CFY+S GY+ C R+ ++ + ++SLF L++G D +L WPF ++
Sbjct: 350 GKTTSIYSPCFYTSRTGYKMCARIYLNGDGMGKGSHISLFFVLMRGHFDGLLRWPFRQKV 409
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
F L+ ++ + D + D SFKRP + A G F+ ++ L+ R +
Sbjct: 410 TFMLLDQNNREHVIDAFRPDPTSSSFKRPTSDM--NIASGCPLFMPLSQ-LESTRHAYVR 466
Query: 446 DDTFVIKTQV 455
DD +K V
Sbjct: 467 DDAIFLKIIV 476
>gi|350590687|ref|XP_003483122.1| PREDICTED: TNF receptor-associated factor 4 [Sus scrofa]
Length = 639
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 476 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 535
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 536 IRVLPGAFDNLLEWPFARRVTFSLLDQSEPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 595
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 596 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 627
>gi|147901683|ref|NP_001086538.1| TNF receptor-associated factor 4 [Xenopus laevis]
gi|49899052|gb|AAH76768.1| MGC83213 protein [Xenopus laevis]
Length = 470
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 295 KQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVN 353
KQ EE+ + GV WK+ ++ K++E K Y +S FY+ +GYR
Sbjct: 297 KQVEELSVSS-----EGVLIWKISDYSRKVQEAKVRGNYESFSPTFYTHKYGYRLQVSAF 351
Query: 354 I---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSD 405
+ + YLS++I ++ GE D++L+WPF R+ F+ L+ S +T+ D
Sbjct: 352 LNGNGSGEGNYLSVYIRVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHVTETFNPD 411
Query: 406 KNFDSFKRPV----NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
N+ +F++P + + FG+ FI D+ R +L ++ F+
Sbjct: 412 PNWKNFQKPTSSRNSLDESTLGFGYPKFISNEDIRK--RNYLRDNAIFL 458
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L +F C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 12 LRRKFLCPLCSKAIREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDR 70
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
+++ + C + + C + + ++H+N C
Sbjct: 71 DLETQVMSLTIRCIHSEEGCRWSGQLKQLQTHLNIC 106
>gi|165971266|gb|AAI58697.1| LOC687813 protein [Rattus norvegicus]
Length = 364
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 12/155 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 218 DREHVLNL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 269
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 270 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 329
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSF 411
L WPF ++ F L+ ++ D + D + SF
Sbjct: 330 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASF 364
>gi|432096071|gb|ELK26939.1| Serine/threonine-protein kinase Nek8 [Myotis davidii]
Length = 1141
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 978 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 1037
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 1038 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 1097
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 1098 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 1129
>gi|297298655|ref|XP_001082535.2| PREDICTED: TNF receptor-associated factor 3 isoform 2, partial
[Macaca mulatta]
Length = 548
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVN 416
+++GE D +L WPF ++ ++ SS + D + D N SFK+P
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTG 526
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + +D +F DN
Sbjct: 46 TVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESVVRDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL++ H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFE 144
>gi|11514536|pdb|1FLK|A Chain A, Molecular Basis For Cd40 Signaling Mediated By Traf3
gi|11514537|pdb|1FLK|B Chain B, Molecular Basis For Cd40 Signaling Mediated By Traf3
gi|11514539|pdb|1FLL|A Chain A, Molecular Basis For Cd40 Signaling Mediated By Traf3
gi|11514541|pdb|1FLL|B Chain B, Molecular Basis For Cd40 Signaling Mediated By Traf3
Length = 228
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 253 DCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGV 312
D S N+ LL+ R +Q + I++ + +L + E NGV
Sbjct: 28 DKSAGQVARNTGLLESQLSRH---DQMLSVHDIRLADMDLRFQVLETAS-------YNGV 77
Query: 313 YFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF +
Sbjct: 78 LIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVI 137
Query: 369 VQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
++GE D +L WPF ++ ++ SS + D + D N SFK+P A G
Sbjct: 138 MRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIASGCP 195
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 196 VFV-AQTVLE--NGTYIKDDTIFIKVIV 220
>gi|426237214|ref|XP_004012556.1| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 4
[Ovis aries]
Length = 459
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 296 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 355
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNF--F 418
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 356 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 415
Query: 419 LNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
L++ A FG+ FI D+ R ++ +D F+
Sbjct: 416 LDESALGFGYPKFISHQDIRK--RNYVRDDAVFI 447
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
++L ++ C + + C + + H+NTC
Sbjct: 74 VQVLGLSIRCIHSEEACRWNGPLRHLQGHLNTC 106
>gi|443720387|gb|ELU10185.1| hypothetical protein CAPTEDRAFT_187359 [Capitella teleta]
Length = 431
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL + ++ LE+ + I + EL L E + + G Y WK+ +F K
Sbjct: 239 LLDAMEKKCRDLERIVSMSDINLKEVELRLSSMENVSYD-------GRYLWKLSDFSRKR 291
Query: 325 KE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWP 380
++ + YS F++ GYR C R+ ++ + +LSLF L++G D +L WP
Sbjct: 292 QDAIDGRTTSLYSEPFFTHKTGYRMCVRLYLNGDGLGKGTHLSLFFVLMRGPCDSLLPWP 351
Query: 381 FVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGR 440
F ++ F ++ S D + D SFKRP + A G F+ + + +P
Sbjct: 352 FRQKVTFKFVDQSQNDHQVDCFRPDPTSTSFKRPTSDM--NIASGCPLFMPLTLLDNPQH 409
Query: 441 GFLMEDDTFV 450
F+ +D F+
Sbjct: 410 AFIRDDTAFI 419
>gi|224076413|ref|XP_002195064.1| PREDICTED: TNF receptor-associated factor 4 [Taeniopygia guttata]
Length = 217
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNI---SREDAQYLSL 364
+G WK+ ++ KL+E K + Y F+S FY+ +GY+ + ++ +LS+
Sbjct: 53 SDGTLIWKIADYARKLQEAKTRSNYEFFSPPFYTHKYGYKLQVSAFLNGNGSGESSHLSV 112
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRP----V 415
+I ++ GE D++L+WPF R+ F+ L+ S IT+ D N+ +F++P
Sbjct: 113 YIRVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHITETFHPDPNWKNFQKPGASRS 172
Query: 416 NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ + FG+ FI D+ R ++ ++ F+
Sbjct: 173 SLDESTLGFGYPKFISHEDIRK--RNYVRDNAIFI 205
>gi|348543171|ref|XP_003459057.1| PREDICTED: TNF receptor-associated factor 2-like [Oreochromis
niloticus]
Length = 568
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G++ WK+ +F K ++ + +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 418 DGIFVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLF 477
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
+++G +D +L WPF ++ L+ ++ I D + D + SF+RPV+ A G
Sbjct: 478 FVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDM--NIASG 535
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F ++ LD ++ DDT IK V
Sbjct: 536 CPLFCPLSK-LDSKNSYI-RDDTIFIKAIV 563
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVL 62
NL+ + C+ C + L+ + CGH+FC+ C + + G C I E +L
Sbjct: 27 NLEDKHLCNSCQKILRRPLQAQCGHRFCSFCFNKIVSC-GPQKCSACIKEDLFEEPTSIL 85
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYE-SHVNTC-YLKYSQPSVEDITDS 120
+ F DN RRE+ CP + C+ ++ E+E SH C ++ PS +++ +
Sbjct: 86 KQGGAFPDNAARREVEALAAVCPNEGCTWTGTVKEFEASHEGNCDFMIILCPSCKELMRA 145
Query: 121 PTSSFRNTSGIPTNKRNSK 139
N P N K
Sbjct: 146 NEQERHNERECPERTLNCK 164
>gi|397483159|ref|XP_003812771.1| PREDICTED: TNF receptor-associated factor 4 [Pan paniscus]
Length = 465
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 302 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 361
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 362 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 421
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 422 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 453
>gi|426225943|ref|XP_004007117.1| PREDICTED: TNF receptor-associated factor 2-like [Ovis aries]
Length = 215
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV+ WK+ +F K +E + +S FY+S +GY+ C R ++ + +LSLF
Sbjct: 65 DGVFVWKISDFSRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLF 124
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
L++G +D +L WPF ++ L+ ++ + D + D SF+RPV
Sbjct: 125 FVLMRGPHDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVT 175
>gi|194217359|ref|XP_001918045.1| PREDICTED: TNF receptor-associated factor 4 [Equus caballus]
Length = 434
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 271 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 330
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 331 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 390
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 391 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 422
>gi|395748772|ref|XP_002827257.2| PREDICTED: TNF receptor-associated factor 4 [Pongo abelii]
Length = 452
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 289 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 348
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 349 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 408
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 409 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 440
>gi|119911649|ref|XP_001251944.1| PREDICTED: TNF receptor-associated factor 4-like [Bos taurus]
Length = 503
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 340 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 399
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 400 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 459
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 460 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 491
>gi|443693919|gb|ELT95187.1| hypothetical protein CAPTEDRAFT_93479 [Capitella teleta]
Length = 475
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 311 GVYFWKMYNFPA-KLKEMKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFI 366
G WK+ A + K+ +Y YS F++ +GY+ C R I+ + +LSLF
Sbjct: 326 GEMVWKISGINAMRRAATKDTIKYIYSPVFFTHPYGYKLCLRAYINGDGLGKGTHLSLFF 385
Query: 367 HLVQGENDDILDWPFVGRIRFTALNTSSEFSIT-DEIQSDKNFDSFKRPVNFFLNKKAFG 425
++QG+ D L WPF G ++ L+ FS E +S N +SF+RP N G
Sbjct: 386 VILQGDYDATLQWPFSGTVKMKLLSQDKNFSDHYKEFRSSPNSNSFQRPKNE--RNPPTG 443
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F F L + + + D+ + IKT V
Sbjct: 444 FPEF--STHTLTWAKPYYLNDEIY-IKTSV 470
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 22/99 (22%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWID-------------------VKG 51
+NLD F CSIC E L++ + T CGH C +C++ +++ V
Sbjct: 10 VNLDKSFLCSICKEPLRNPMQTFCGHHACCSCLEGYMEEAHAVSAAASREEEEGERTVAA 69
Query: 52 KNYCPIDEK---VLTKDDIFIDNYTRREILENNLTCPYK 87
CP E+ +TK++IF+D ++ + CP K
Sbjct: 70 APICPAQERNCHTVTKENIFLDRAIQKRLERQAAYCPNK 108
>gi|410051653|ref|XP_511363.3| PREDICTED: TNF receptor-associated factor 4 isoform 2 [Pan
troglodytes]
Length = 325
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 162 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 221
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 222 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 281
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 282 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 313
>gi|156382776|ref|XP_001632728.1| predicted protein [Nematostella vectensis]
gi|156219788|gb|EDO40665.1| predicted protein [Nematostella vectensis]
Length = 382
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 14/185 (7%)
Query: 13 LDPRFECSICLEYLKDAILT-SCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
+ P ++C IC +D + T CGH+FC +C++ I K +CPID + +++D ++ D
Sbjct: 36 IPPDYQCPICQLPFRDPVQTRDCGHRFCESCLEP-ILRKPPAFCPIDRRCISRDKVYPDK 94
Query: 72 YTRREILENNLTCP--YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
+R +L + CP C + S+ + Y + +E P N
Sbjct: 95 ACKRTVLSLTVKCPNHVTDCEWVGELGNLPSNSSNSYEVLVKVHIEACKRVPIKCVNNCG 154
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSN-ENFPCKFYQVGCREVFKSQALLEKHYDLKTS 188
+ + H+++ G PCK+ VGC+ K + +EKH +
Sbjct: 155 RTDIAREEMAV--------HIDVDGDCPLATVPCKYSDVGCKTKVK-RIEMEKHLQDSMA 205
Query: 189 FHLEL 193
HL++
Sbjct: 206 SHLDM 210
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 307 KLC-NGVYFWKMYNFPAKLKE--MKEINRYFYSACFYSSCFGYRFCTRV---NISREDAQ 360
K+C NG + WK+ N+ ++ K+ S FY+ +GY+ + +
Sbjct: 224 KICTNGKFLWKISNYTQLFQQSATKKEKEKLCSPPFYTGQYGYKLRAEAFLNGLGQGKGT 283
Query: 361 YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSI----TDEIQSDKNFDSFKRPVN 416
+LSL++ +++G+ D +L WPF R+ F ++ +F+ T + D+N D F RP
Sbjct: 284 HLSLYVVIMKGDYDSVLPWPFQQRVDFILIDQDDDFTSRQNKTWRLTCDRNSDYFGRP-- 341
Query: 417 FFLNK-KAFGFNNFIRVADVLDPGRGFLMEDDTFVI 451
NK K+ GF V+ R F+ ++ F++
Sbjct: 342 ---NKAKSLGFGCPKFVSQETLKSRNFVRDNTVFIM 374
>gi|156374437|ref|XP_001629813.1| predicted protein [Nematostella vectensis]
gi|156216822|gb|EDO37750.1| predicted protein [Nematostella vectensis]
Length = 469
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H+ + V + + L+ + ++Q+ ++N+ + ++ + D+ +L W++ +F
Sbjct: 274 HIEESVQQHLELVSELAIQQQKEINSLKEIVRHCKPYHDSKLL--------WRIDDFWEA 325
Query: 324 LKEMK-EINRYFYSACFYSSCFGYRFCTRV----NISREDAQYLSLFIHLVQGENDDILD 378
E K + +S FY+S +GY+F + N S E +LSL+I L+ GE D +L
Sbjct: 326 FDEGKRKPGTELHSPVFYTSNYGYKFKVVLFPYGNGSGE-GTHLSLYIRLLPGEYDSLLP 384
Query: 379 WPFVGRIRFTALNTSSE----FSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVAD 434
WPF G+I T L+ S++ I+ D N+ SF+RP FG+ F+
Sbjct: 385 WPFEGQITLTLLDQSTDKRAKRHISQSFSPDPNWKSFQRPSKNS-TSLGFGYPQFVSHRG 443
Query: 435 VLDPGRGFLMEDDTFVIKTQV 455
+ G + DD +K +
Sbjct: 444 LESIG---YVRDDVLFLKVTI 461
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 19 CSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREI 77
C IC +++A+ S CGH+FC +C++ + + + CP+D + ++ D+ T + I
Sbjct: 18 CRICHLPVRNAVQVSVCGHRFCDSCLNHALG-ETRLRCPVDNTAIDYSQVYADDVTNQMI 76
Query: 78 LENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
+ + C Y Q C + + + + H+ C
Sbjct: 77 MSLTVICDYYQAGCKWKGQLRKLQGHLAEC 106
>gi|340373598|ref|XP_003385328.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 504
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 301 EDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA 359
+D + +K NGV+ WK+ + + ++ YS F++S GYR C R ++ + +
Sbjct: 340 QDILDVKTTNGVFIWKIPEIARRYADAQQRRTLSLYSPPFHTSPHGYRMCIRAYLNGDGS 399
Query: 360 ---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPV 415
++S+F L++ E+D++L WPF + F LN S S ++T+ D SF++P
Sbjct: 400 GKGTHISVFFVLMKSEHDNLLSWPFKSPVTFQLLNLSNSGNNVTETFMPDLQSPSFQQPK 459
Query: 416 NFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ A GF F + + + DP F D F+
Sbjct: 460 SEM--NIASGFPRFAKQSYLKDP--NFTKGDAIFI 490
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 17 FECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
CS C L++ L +CGH+ C +C+ + K CP D++ +TK+D+ D +
Sbjct: 32 LHCSECSLLLREPYQLLNCGHRICRSCLLETVLKKNNPVCPEDKEPVTKNDVRPDKGCAK 91
Query: 76 EILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
EI C + C+ + ++ E E HV +C
Sbjct: 92 EINSLTAACGGSENGCTWRGTVAEAEIHVESC 123
>gi|351710403|gb|EHB13322.1| TNF receptor-associated factor 4 [Heterocephalus glaber]
Length = 466
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 303 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 362
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 363 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 422
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 423 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 454
>gi|297272238|ref|XP_001107048.2| PREDICTED: TNF receptor-associated factor 4-like [Macaca mulatta]
Length = 352
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 189 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 248
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 249 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 308
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 309 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 340
>gi|50513380|pdb|1RF3|A Chain A, Structurally Distinct Recognition Motifs In Lymphotoxin-B
Receptor And Cd40 For Traf-Mediated Signaling
Length = 200
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 39 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 98
Query: 366 IHLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 99 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 156
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 157 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 184
>gi|343959290|dbj|BAK63502.1| TNF receptor-associated factor 4 [Pan troglodytes]
Length = 470
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 307 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 366
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 367 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 426
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 427 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTC 105
++L + C + + + S P + H+NTC
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTC 106
>gi|432950243|ref|XP_004084442.1| PREDICTED: TNF receptor-associated factor 3-like isoform 1 [Oryzias
latipes]
Length = 592
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NG WK+ ++ + ++ + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 439 NGTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 498
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ S + D + D + SF+RPV A
Sbjct: 499 FVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPSSSSFRRPVAEM--NIAS 556
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ + VL+ G ++DDT IK V
Sbjct: 557 GCPLFVSQS-VLE--SGTYIKDDTIFIKVTV 584
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
++ C C L T CGH+FC +CI+ + CP D + L KD IF D R
Sbjct: 75 KYCCEACRLVLCQPRQTECGHRFCYSCINDILSCPNP-VCPADMEPLFKDKIFRDVCCHR 133
Query: 76 EILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
EI+ + C + C Q+S+ + HVN C
Sbjct: 134 EIMALKVYCRSEANGCQEQMSLQQIPDHVNVC 165
>gi|428698214|pdb|4GHU|A Chain A, Crystal Structure Of Traf3CARDIF
Length = 198
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 39 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 98
Query: 366 IHLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 99 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 156
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 157 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 184
>gi|20664236|pdb|1KZZ|A Chain A, Downstream Regulator Tank Binds To The Cd40 Recognition
Site On Traf3
gi|20664240|pdb|1L0A|A Chain A, Downstream Regulator Tank Binds To The Cd40 Recognition
Site On Traf3
gi|73535953|pdb|1ZMS|A Chain A, Lmp1 Protein Binds To Traf3 As A Structural Cd40
gi|99032608|pdb|2GKW|A Chain A, Key Contacts Promote Recongnito Of Baff-R By Traf3
Length = 192
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 39 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 98
Query: 366 IHLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 99 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 156
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 157 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 184
>gi|410051651|ref|XP_003953135.1| PREDICTED: TNF receptor-associated factor 4 isoform 1 [Pan
troglodytes]
gi|119571526|gb|EAW51141.1| TNF receptor-associated factor 4, isoform CRA_c [Homo sapiens]
Length = 352
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 189 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 248
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 249 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 308
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 309 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 340
>gi|449681025|ref|XP_002169387.2| PREDICTED: TNF receptor-associated factor 2-like, partial [Hydra
magnipapillata]
Length = 361
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 286 KVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK-LKEMKEINRYFYSACFYSSCF 344
K+N +L+ +++I +N +G WK+ ++ + + M +SA Y+S F
Sbjct: 198 KLNETYSDLQLSQQILENTSY---DGHLLWKISSYKQRSMAAMSGTIPALHSAPCYTSRF 254
Query: 345 GYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDE 401
GY++C R+ ++ + A Y+SLF L++ + D + WPF ++ F + E+ I +
Sbjct: 255 GYKYCLRLYLNGDGAGKGSYISLFFVLMKSDYDSLHKWPFQNKVTFRLRAKNPEYDIVES 314
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
DKN SF +PV A G F + +D+ F+++D F+
Sbjct: 315 FTPDKNSSSFIKPVREM--NIAAGVPLFAKKSDI---NENFILDDAIFI 358
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDD 66
AN N+ ++ C IC L + I T CG + C +C+ K CP++E T
Sbjct: 15 ANPVKNISAKYLCKICTYLLYNPIQTGCGERICESCVK--FTSSDKILCPVEEVECT--- 69
Query: 67 IFIDNYTRREILENNLTCPYKQ 88
F D + +EI CP+ +
Sbjct: 70 YFYDKFANKEIQALEFYCPFNE 91
>gi|185133164|ref|NP_001118087.1| TNF receptor-associated factor 3 [Oncorhynchus mykiss]
gi|26185806|emb|CAD57164.1| tumour necrosis factor receptor associated factor 3 [Oncorhynchus
mykiss]
Length = 576
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NG WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 423 NGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 482
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ + + D + D N SF+RP A
Sbjct: 483 FVVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEM--NIAS 540
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 541 GCPLFV-AQTVLE--NGTYIKDDTIFIKVTV 568
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYT 73
+P++ C C L + T CGH+FC CI + K CP D++ L KD +F D
Sbjct: 57 EPKYCCESCKLVLCNPRQTECGHRFCETCISDQLS-KPNPVCPEDKEPLFKDKVFRDVCC 115
Query: 74 RREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
REI+ + C ++ C Q+S+ + H+N C
Sbjct: 116 HREIMALRVYCRSEKNGCKEQMSLHQVMDHLNVC 149
>gi|441661343|ref|XP_003277186.2| PREDICTED: TNF receptor-associated factor 4 [Nomascus leucogenys]
Length = 526
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 363 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 422
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D +L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 423 IRVLPGAFDSLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 482
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 483 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 514
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L + D
Sbjct: 71 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKVSPDPELE 129
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTC 105
++L + C + + + S P + H+NTC
Sbjct: 130 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTC 162
>gi|405954686|gb|EKC22057.1| TNF receptor-associated factor 3 [Crassostrea gigas]
Length = 520
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FY 335
E+ M Q I++ +L + E +G+ WK+ ++ + +E K Y
Sbjct: 341 EKQMAIQDIRLAELDLRFQVLETAS-------YDGILMWKIRDYYRRKQEAKSGRTLSLY 393
Query: 336 SACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT 392
S FY+S GY+ C RV ++ + +LSLF +++GE D +L WPF ++ L+
Sbjct: 394 SQPFYTSRTGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFQQKVSLMLLDQ 453
Query: 393 SS-EFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 451
+ + D Q D SFKRP A G FI + VL+ + DDT I
Sbjct: 454 ETFRRHVCDTFQPDTTSSSFKRPTTEM--NVATGCPLFISHS-VLE--TKTYLNDDTIFI 508
Query: 452 KTQV 455
K +V
Sbjct: 509 KVKV 512
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 26 LKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-----EKVLTKDDIFIDNYTRREILEN 80
L++A+ CGH+ C CID CP+ E+ K+ I D TRRE++
Sbjct: 26 LRNAMQLPCGHQICEPCIDPLFGESDNATCPVKDDEYCEQPFPKNQIHKDMCTRREVMSL 85
Query: 81 NLTCPY 86
+ C Y
Sbjct: 86 PVFCEY 91
>gi|432950245|ref|XP_004084443.1| PREDICTED: TNF receptor-associated factor 3-like isoform 2 [Oryzias
latipes]
Length = 573
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NG WK+ ++ + ++ + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 420 NGTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 479
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ S + D + D + SF+RPV A
Sbjct: 480 FVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPSSSSFRRPVAEM--NIAS 537
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ + VL+ G ++DDT IK V
Sbjct: 538 GCPLFVSQS-VLE--SGTYIKDDTIFIKVTV 565
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
++ C C L T CGH+FC +CI+ + CP D + L KD IF D R
Sbjct: 56 KYCCEACRLVLCQPRQTECGHRFCYSCINDILSCPNP-VCPADMEPLFKDKIFRDVCCHR 114
Query: 76 EILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
EI+ + C + C Q+S+ + HVN C
Sbjct: 115 EIMALKVYCRSEANGCQEQMSLQQIPDHVNVC 146
>gi|156398002|ref|XP_001637978.1| predicted protein [Nematostella vectensis]
gi|156225095|gb|EDO45915.1| predicted protein [Nematostella vectensis]
Length = 422
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 99/259 (38%), Gaps = 54/259 (20%)
Query: 11 LNLDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFI 69
+ LD FEC +CL L+D + +T CGH+ C CI I + + CP+D L IF
Sbjct: 10 VPLDKSFECPVCLMALRDPVQVTPCGHRVCQTCIKPIIRNR-RPRCPLDNLTLNVGKIFP 68
Query: 70 DNYTRREILENNLTCPYK--QCSSQLSIPEYESHV-NTCYL------KYSQPSVEDI--- 117
DN R+IL ++ CP+ C Q +I + E H+ C L K SVE
Sbjct: 69 DNACHRQILSMDILCPHHGDGCEWQGTISDLEKHLERGCNLSEVRCPKDCGASVERGKLE 128
Query: 118 TDSPTSSFRNTSGIPTNKR------------------------NSKILTVTVFPEHLNMQ 153
P S R + NK +K LT HLN Q
Sbjct: 129 GHYPECSRRLVNCTHCNKEVVFADMNVHLQSCASFPISCPLTCGAKDLTKEALAVHLN-Q 187
Query: 154 GSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGR 213
PC+F + GC K Q + H + H+ +L + C Q
Sbjct: 188 ECPLLVIPCRFAEAGCTFKAKRQK-MAAHVQESLTSHVAMLCDLVCEQKLQ--------- 237
Query: 214 QDTSNQKEIEAYLMKNKEH 232
S QKE L+ KEH
Sbjct: 238 --ISAQKE---RLLLQKEH 251
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 263 SHLLKLVYERMVLLEQSMLEQKIKVN-NFELNLKQTEEIEDNVV---LKLCNGVYFWKMY 318
+H+ + + + +L + EQK++++ E L Q E I+ +V + NG + WK+
Sbjct: 214 AHVQESLTSHVAMLCDLVCEQKLQISAQKERLLLQKEHIQLQIVECRSRCANGEFIWKIQ 273
Query: 319 NFPAKLKEMK--EINRYFYSACFYSSCFGYRFCTRV---NISREDAQYLSLFIHLVQGEN 373
F KL + K + S FY+S GY+ C V I +Y+S+ + + GE
Sbjct: 274 CFSRKLMDAKTGRASEPMISEAFYTSPHGYKMCAGVWLNGIGTGRGRYISVGLQVQSGEF 333
Query: 374 DDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRP 414
D IL WP R FT L+ S + ++ + S RP
Sbjct: 334 DSILKWPLYPRYTFTLLDQSEDTKTKRDVVATFEPQSISRP 374
>gi|47214795|emb|CAF89622.1| unnamed protein product [Tetraodon nigroviridis]
Length = 607
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NG WK+ ++ + +E YS FY+ FGY+ C R+ ++ + +LSLF
Sbjct: 430 NGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYKMCARIYLNGDGMGKGTHLSLF 489
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSS-EFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ + + D + D N SF+RPV A
Sbjct: 490 FVVMRGEYDALLPWPFKQKVTLMLMDQGPLKKHLGDAFKPDPNSSSFRRPVVEM--NIAS 547
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEM 458
G F+ VL+ G ++DDT IK ++
Sbjct: 548 GCPLFVS-QSVLETGS--YIKDDTIFIKVSFPQL 578
>gi|148680967|gb|EDL12914.1| Tnf receptor associated factor 4, isoform CRA_b [Mus musculus]
Length = 517
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LS++
Sbjct: 354 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSIY 413
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 414 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 473
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 474 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 505
>gi|327278713|ref|XP_003224105.1| PREDICTED: TNF receptor-associated factor 3-like isoform 1 [Anolis
carolinensis]
Length = 567
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 160/389 (41%), Gaps = 45/389 (11%)
Query: 82 LTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSF-RNTSGIPTNKRNSKI 140
+TCP+K S L E +H++ C I T SF R + K
Sbjct: 201 VTCPHKCSVSALLRKELNAHLSEC-----------INAPSTCSFKRYGCTFQGTNQQVKA 249
Query: 141 LTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCS 200
+ +H+++ + K + + K++++ H + SF +E+ K
Sbjct: 250 HETSSAVQHVDLLKEWSNCLENKVAMLQNESLEKNKSIQTLHNQI-CSFEIEIERQK--- 305
Query: 201 DGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSS---------E 251
+ +S + H Q + +A +K + E + + N +A KSS E
Sbjct: 306 EMLRSNESKIHHLQRVIDS---QAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTE 362
Query: 252 GDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNG 311
+ KT G + L+ ++ +Q + I++ + +L + E NG
Sbjct: 363 LESVDKTAGQGARNAGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASY-------NG 415
Query: 312 VYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIH 367
+ WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 416 ILIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFV 475
Query: 368 LVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGF 426
+++GE D +L WPF ++ ++ S + D + D N SFK+P A G
Sbjct: 476 IMRGEYDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEM--NIASGC 533
Query: 427 NNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 534 PVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH++C C+++ + C ++ + K+ IF DN
Sbjct: 46 VEDKYKCEKCRLILCNPRQTECGHRYCETCMNALLSCTIPK-CTACQETIVKEKIFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV 102
RRE+L + C K C QL++ + +H+
Sbjct: 105 CRRELLALQIFCRNENKGCREQLTLGQLLTHL 136
>gi|156359793|ref|XP_001624949.1| predicted protein [Nematostella vectensis]
gi|156211757|gb|EDO32849.1| predicted protein [Nematostella vectensis]
Length = 464
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNV------VLKLCNGVYFWKM 317
H+ + + ++ +LEQK K++N ++ E I V + K+ + W++
Sbjct: 253 HMKSEIIGHVKMIFGVVLEQKEKLDNHAQKFEEHETIMKQVDSRVGDLEKIAHSQIIWRI 312
Query: 318 YNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGEN 373
++ KLKE K N +S F +S GYR C V + + ++S+F+ +++G
Sbjct: 313 EDYTRKLKEAKAGNAETLFSPTFTTSKHGYRLCASVCLNGDGKGKGTHMSVFVSVLKGAF 372
Query: 374 DDILDWPFVGRIRFTALNTSS--------EFSITDEIQSDKNFDSFKRPVNFFLNKKA-F 424
D +L WPF R+ F LN +FSI D N RP L K A F
Sbjct: 373 DALLKWPFHYRVTFFLLNQHENPEERKHVKFSIKPNPIPD-NEPFLGRPR---LEKNASF 428
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G FI+ ++ G ++DDT +K V
Sbjct: 429 GGAKFIKHEEI---ESGNFIKDDTVFLKVSV 456
>gi|291245109|ref|XP_002742434.1| PREDICTED: TNF receptor-associated factor 1-like [Saccoglossus
kowalevskii]
Length = 416
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 301 EDNVVLKLC--NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRE 357
+DN + ++ +G WK+ NF K + + YS CFY+S GY+ C R+ ++ +
Sbjct: 253 QDNTMSEMASHDGELVWKITNFLKKRNDAVSRKTVSIYSPCFYTSRHGYKMCARIYLNGD 312
Query: 358 D---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRP 414
++SLF +++G+ D +L WPF ++ L+ ++ + D + D SFKRP
Sbjct: 313 GMGKGNHVSLFFVIMKGQFDALLRWPFRQKVTLMWLDQNNREHVIDAFRPDPTSSSFKRP 372
>gi|149053498|gb|EDM05315.1| Tnf receptor associated factor 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 296
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LS++
Sbjct: 133 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSIY 192
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 193 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 252
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 253 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 284
>gi|344276796|ref|XP_003410192.1| PREDICTED: TNF receptor-associated factor 5-like [Loxodonta
africana]
Length = 528
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 269 VYERMVLLEQS-----MLEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMY 318
+ +++ LLE + +LE + K ++ +N+ + + ++ KL NG WK+
Sbjct: 322 IKQKITLLETNDQILVVLEGQTKKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVT 381
Query: 319 NFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGEND 374
++ K +E + + +S FY+S GYR C R ++ + + +LSL+ +++GE D
Sbjct: 382 DYKMKKREAVDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFD 441
Query: 375 DILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVA 433
+L WPF R+ L+ S + + I + ++D + S+KRP A G F+
Sbjct: 442 SLLQWPFRQRVTLMLLDQSGKKNHIMETFKADPSSSSYKRPDGEM--NIASGCPRFVS-H 498
Query: 434 DVLDPGRGFLMEDDTFVIKTQV 455
L+ + ++DDT +K V
Sbjct: 499 STLENAKNTYIKDDTLFLKVAV 520
>gi|449679983|ref|XP_002159365.2| PREDICTED: TNF receptor-associated factor 2-like [Hydra
magnipapillata]
Length = 254
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 286 KVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK-LKEMKEINRYFYSACFYSSCF 344
K+N +L+ +++I +N +G WK+ ++ + + M +SA Y+S F
Sbjct: 88 KLNETYSDLQLSQQILENTS---YDGHLLWKISSYKQRSMAAMSGTIPALHSAPCYTSRF 144
Query: 345 GYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDE 401
GY++C R+ ++ + A Y+SLF L++ + D + WPF ++ F + E+ I +
Sbjct: 145 GYKYCLRLYLNGDGAGKGSYISLFFVLMKSDYDSLHKWPFQNKVTFRLRAKNPEYDIVES 204
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
DKN SF +PV A G F + +D+ F+++D F+
Sbjct: 205 FTPDKNSSSFIKPVREM--NIAAGVPLFAKKSDI---NENFILDDAIFI 248
>gi|195540185|gb|AAI68067.1| traf4 protein [Xenopus (Silurana) tropicalis]
Length = 247
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 253 DCSCKTCGDNSHLLKLVYERMV--LLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCN 310
D CK G + + + E M L S L + + EL KQ EE+ +
Sbjct: 31 DSGCKHRGPKITISRHLEENMRAHLSMMSSLVSRQRQEILELR-KQVEELSVS-----SE 84
Query: 311 GVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFI 366
GV WK+ ++ K++E K + +S FY+ +GY+ + + YLS++I
Sbjct: 85 GVLIWKISDYSRKVQEAKVRGNFESFSPPFYTHKYGYKLQVSAFLNGNGSGEGSYLSVYI 144
Query: 367 HLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPV----NF 417
++ GE D++L+WPF R+ F+ L+ S IT+ D N+ +F++P +
Sbjct: 145 RVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHITETFNPDPNWKNFQKPTGSRNSL 204
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ ++ F+
Sbjct: 205 DESTLGFGYPKFISHEDIRK--RNYVRDNAIFL 235
>gi|449681318|ref|XP_002167601.2| PREDICTED: TNF receptor-associated factor 2-like [Hydra
magnipapillata]
Length = 247
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 286 KVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK-LKEMKEINRYFYSACFYSSCF 344
K+N +L+ +++I +N +G WK+ ++ + + M +SA Y+S F
Sbjct: 81 KLNETYSDLQLSQQILENTS---YDGHLLWKISSYKQRSMAAMSGTIPALHSAPCYTSRF 137
Query: 345 GYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDE 401
GY++C R+ ++ + A Y+SLF L++ + D + WPF ++ F + E+ I +
Sbjct: 138 GYKYCLRLYLNGDGAGKGSYISLFFVLMKSDYDSLHKWPFQNKVTFRLRAKNPEYDIVES 197
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
DKN SF +PV A G F + +D+ F+++D F+
Sbjct: 198 FTPDKNSSSFIKPVREM--NIAAGVPLFAKKSDI---NENFILDDAIFI 241
>gi|443691253|gb|ELT93162.1| hypothetical protein CAPTEDRAFT_156814 [Capitella teleta]
Length = 542
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 310 NGVYFWKMYNFPAKLKE--MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSL 364
+G WK+ N+ + ++ ++ YS FY+ FGY+ C R ++ + +LSL
Sbjct: 388 DGTLVWKISNYTERKQDARIRGDAVSIYSQPFYTHRFGYKMCIRGYLNGDGIGKNSHLSL 447
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVN 416
F L++GE D +L WPF+G++ F ++ + I D ++D SFKRP N
Sbjct: 448 FFVLMKGEFDALLKWPFMGKVTFMLVDQEKGQRHIQDVFRTDPTSSSFKRPQN 500
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-----YCPIDE---KVL 62
+NL+ ++ C +C ++ + T CGH+ C +CI+++I + + CPI+E + +
Sbjct: 23 VNLECKYRCPMCKNPMRAPVQTECGHRMCLSCIENYILERTNSGTPAPICPINEEGCEPV 82
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
T + I+ D +++I ++ C K C+ QL + H+ C
Sbjct: 83 TIETIYPDYNMKKQIEGQHVFCKNKDFGCTEQLKWKDLPQHLFAC 127
>gi|355568364|gb|EHH24645.1| Cysteine-rich domain associated with RING and Traf domains protein
1, partial [Macaca mulatta]
Length = 424
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ GY+ + + +LSL+
Sbjct: 261 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTQKCGYKLQVSAFLNGNGSGEGTHLSLY 320
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 321 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 380
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 381 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 412
>gi|189240973|ref|XP_967534.2| PREDICTED: similar to tnf receptor associated factor [Tribolium
castaneum]
Length = 466
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRV----NISREDAQYLSL 364
+G WK+ +F K+ E K + S FY+S +GY+ + N + ED+ ++S+
Sbjct: 309 SGTLIWKISDFSEKMTEAKNKEGMELVSPPFYTSQYGYKLQASLFPNGNGAGEDS-HISV 367
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSS----EFSITDEIQSDKNFDSFKRPVNFFLN 420
+I ++ GE D +L WPF + FT + SS +I + D + +F+RP +
Sbjct: 368 YIKILPGEYDALLRWPFAHSVSFTLFDQSSCPEKACNIVESFIPDPTWKNFQRPSK-EPD 426
Query: 421 KKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F V+ + R F M+DDT I+ +V
Sbjct: 427 SLGFGFPKF--VSHEMLKKRHF-MKDDTMFIRVKV 458
>gi|124295369|gb|ABN04152.1| tumor necrosis factor receptor-associated factor 3 [Branchiostoma
belcheri]
Length = 565
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
LD R+ C +C L++ T CGH++C CI + + CPID + L +D++F D +
Sbjct: 35 LDDRYRCPVCTFILREPRQTGCGHRYCNYCITITLK-EPTPTCPIDGEELRQDEVFPDLF 93
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
REIL + + C +K+ C L + E+HVN C
Sbjct: 94 CIREILMSKVYCRFKKNGCQEILLLRNLEAHVNEC 128
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 279 SMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-----NGVYFWKMYNFPAKLKEMKEINRY 333
+LE ++ ++ +L + E ++ ++ +G WK+ ++ + K R
Sbjct: 376 GVLETQLNTHDRQLGIHDVRLAEMDLRFQILETTSFDGTLLWKIKDY-TRRKHDAVTGRT 434
Query: 334 F--YSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFT 388
YS FY+S FGY+ C RV ++ + ++SLF +++GE D +L WPF ++
Sbjct: 435 LSLYSQPFYTSQFGYKMCARVYLNGDGMGKGTHMSLFFVVMRGEYDALLPWPFRQKVTLM 494
Query: 389 ALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
L+ ++D + D SFKRP + A G F V+ + + +L ED
Sbjct: 495 LLDQDQGRRHLSDTFRPDPTSSSFKRPTSDM--NIASGCPLF--VSQSVAESKTYLNEDT 550
Query: 448 TFV 450
F+
Sbjct: 551 IFI 553
>gi|64966536|emb|CAH04636.1| tumour necrosis receptor-associated factor [Suberites domuncula]
Length = 544
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 92/192 (47%), Gaps = 16/192 (8%)
Query: 227 MKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
++ ++H+ + P G DK +EG+ GD+ L R+V LE+ + + +
Sbjct: 321 IRQRKHDGETRGPT---VGQDKHNEGNH-----GDDVAPL----SRLVQLERRVEDLSRQ 368
Query: 287 VNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFG 345
+ ++++++ E + NG + W++ N + ++ ++E YS FY+ G
Sbjct: 369 TTSTQVHVQELELQLQASLASTHNGAFLWRIPNIARRRRDAVEERITSIYSPPFYTGRNG 428
Query: 346 YRFCTRVNISREDAQY---LSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEI 402
Y+ C R ++ + Y LSLF +++GE D++L WPF ++ ++ S +
Sbjct: 429 YKMCIRAYLNGDGQGYNTHLSLFFVIMKGEFDNLLKWPFEHKVSMILVDQSHRKHVVQTF 488
Query: 403 QSDKNFDSFKRP 414
+ SF++P
Sbjct: 489 KPTPESSSFQQP 500
>gi|221127200|ref|XP_002156040.1| PREDICTED: TNF receptor-associated factor 2-like [Hydra
magnipapillata]
Length = 262
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 310 NGVYFWKMYNFPAK-LKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLF 365
+G WK+ ++ + + M +SA Y+S FGY++C R+ ++ + A Y+SLF
Sbjct: 117 DGHLLWKISSYKQRSMAAMSGTIPALHSAPCYTSRFGYKYCLRLYLNGDGAGKGSYISLF 176
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
L++ + D + WPF ++ F + E+ I + DKN SF +PV A G
Sbjct: 177 FVLMKSDYDSLHKWPFQNKVTFRLRAKNPEYDIVESFTPDKNSSSFIKPVREM--NIAAG 234
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFV 450
F + +D+ F+++D F+
Sbjct: 235 VPLFAKKSDI---NENFILDDAIFI 256
>gi|156384771|ref|XP_001633306.1| predicted protein [Nematostella vectensis]
gi|156220374|gb|EDO41243.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDNYTRR 75
+ C IC L+ + T CGH+FC C+D K + CP+D + L K D+F+D R
Sbjct: 23 YTCRICHLPLRVPVQTKCGHRFCKECLDEASRRKSRAECPMDREPLDLKKDVFLDKAAER 82
Query: 76 EILENNLTCPYKQCSSQLSIPEYESHVNTC 105
IL + CP K C + + + E+H C
Sbjct: 83 TILSFLVKCPCKGCKWEAELRDLEAHARNC 112
>gi|260795009|ref|XP_002592499.1| hypothetical protein BRAFLDRAFT_68990 [Branchiostoma floridae]
gi|229277719|gb|EEN48510.1| hypothetical protein BRAFLDRAFT_68990 [Branchiostoma floridae]
Length = 658
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 269 VYERMVLLEQSMLEQKIKVNNFELNLKQTEEIED-----NVVLKLCNGVYFWKMYNFPAK 323
+ER + +LE+K++ + LK + N + +G+ WK+ +F K
Sbjct: 413 THERQRRQDIEILERKVRSLERIIALKDASAVHAEQCLLNQTMTSYDGILTWKITDFTRK 472
Query: 324 LKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDW 379
+ + + YS F++S GY+ C R+ ++ + ++SLF L++G D +L W
Sbjct: 473 RHDAITGKTTFIYSPYFFTSRTGYKMCARIYLNGDGMGKGTHVSLFFVLMRGHFDRLLRW 532
Query: 380 PFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
PF ++ F L+ ++ + D + + SF+RP + A G F+ + +
Sbjct: 533 PFRQKVTFLLLDLNNREHVIDAFRPNPTSSSFQRPTSDM--NIASGCPLFVPHSQLDSSS 590
Query: 440 RGFLMEDDTFVIKTQVTE 457
++ ED F+ T+ E
Sbjct: 591 HAYVDEDTMFIRLTERHE 608
>gi|256086896|ref|XP_002579620.1| tnf receptor-associated factor [Schistosoma mansoni]
Length = 452
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 155/377 (41%), Gaps = 72/377 (19%)
Query: 125 FRNTSGIPTNKRNSKILTV---TVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEK 181
R TS P +K+N K V F EH++ N C ++ GC + L E
Sbjct: 88 LRGTSKCPVDKQNLKKDRVHLDKAFQEHMD-----GLNVRCSYHTEGCPWI---GILSEL 139
Query: 182 HYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSN--------------QKEIEAYLM 227
Y L + +L C SQ + +H + D +KEIE
Sbjct: 140 GYHLSQCEYRIVLCPNGCGAESQRKSIENHIKNDCPKRIKRCKFCNVKYIAEKEIEH--- 196
Query: 228 KNKEHESKLWDPNKNQAGDDKSS------EGDCSCKT--CGDNSHLLKLVYERMVL---L 276
N E + PNK + S + +CS + C N H + + + L
Sbjct: 197 TNNCREYPVPCPNKCEKTKIPRSLISEHLKNECSRQNIRCPFNVHGCEFRGHKNKIDTHL 256
Query: 277 EQSMLEQKIKVNNFELNLKQTE-----EIEDNVVLKLCNGVYF-WKMYNFPAKLKEMKEI 330
E+S++ + +N L+++Q +I+ L+ C G F WK+ ++ KL K
Sbjct: 257 ERSLM---VHLNFLNLSVQQMSLLIEAQIKRVTALEQCLGAPFLWKIDSYSEKLNNAKSG 313
Query: 331 NR-YFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S+ FY+ +GYR V++ +Y+S++ L +G++D +L WPF ++
Sbjct: 314 KQTALFSSPFYTHRYGYRMALSVSLYGNGDARGKYMSVYACLFRGDHDSLLQWPFSHQLT 373
Query: 387 FTALNTSSE--------FSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
FT ++ + E ++I I D N F RP N FG FI++
Sbjct: 374 FTLIDQNPEINARQPIVYTINPSITGDYN-QFFGRPTN--ERNSCFGAPRFIKLE----- 425
Query: 439 GRGFLMEDDTFVIKTQV 455
LME T+++ ++
Sbjct: 426 ----LMEMSTYILNDEI 438
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 13 LDPRFECSICLEYLKDAIL-TSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
LD + C C L+ L CGH+ C+ C+ + +G + CP+D++ L KD + +D
Sbjct: 53 LDIAYRCVNCNRVLRVPFLFEDCGHRCCSGCVPDIL--RGTSKCPVDKQNLKKDRVHLDK 110
Query: 72 YTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+ + N+ C Y + C + E H++ C
Sbjct: 111 AFQEHMDGLNVRCSYHTEGCPWIGILSELGYHLSQC 146
>gi|198412187|ref|XP_002130602.1| PREDICTED: similar to tumor necrosis factor receptor-associated
factor 3 [Ciona intestinalis]
Length = 290
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRYF--YSACFYSSCFGYRFCTRVNISRED---AQYLSL 364
+GV WK+ NF + +E E R YS FY+S +GY+ C RV ++ + ++SL
Sbjct: 137 SGVALWKINNFQRRKRE-AESGRALSIYSQPFYTSRYGYKMCARVYLNGDGMGKGTHVSL 195
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVN 416
F L++GE D++L WPF ++ L+ E ++D + D SF +P +
Sbjct: 196 FFVLMKGEYDNLLPWPFRQKVTLMLLDQGLERRHLSDMFRPDPTSSSFTKPTS 248
>gi|340375322|ref|XP_003386185.1| PREDICTED: TNF receptor-associated factor 3-like [Amphimedon
queenslandica]
Length = 480
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 172/453 (37%), Gaps = 64/453 (14%)
Query: 7 ANNKLNLDPRFECSICL----EYLKDAILTSCGHKFCAACIDSWIDVKGKN--YCPIDEK 60
KLN+ P F IC A T+CG + C C S ++ YC ++
Sbjct: 3 GKEKLNV-PHFLPMICCNCGYPVTDPARQTTCGCRMCPECFSSLLERTDTELYYCKRCDQ 61
Query: 61 VLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQP------- 112
+D+F D E+ + C C S EY+ H++TC Y + P
Sbjct: 62 YSHINDLFKDRAVNNELERTSFPCFNHSCPWFGSNVEYKDHISTCSYAIITCPHIGCGQK 121
Query: 113 --------SVEDITDSPTSSFRNTSGIPTNKRNSKILT------------------VTVF 146
+E +PT +P +K T +
Sbjct: 122 LLRDEMSGHIETCIHAPTVCRFCKVSLPLSKLEDHFATDCPEYIIPCSLGCGTKVPRRIL 181
Query: 147 PEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQST 206
EHL+ E C+F + GC + LL KHY +H+ LL + S Q
Sbjct: 182 GEHLSDSCLLQER-ECRFTKYGCHRK-DTLELLIKHYKDDAGYHVGLLEKSFSSLKHQDA 239
Query: 207 NTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLL 266
++D ++ E +++ E L D++ + G SH+
Sbjct: 240 L-----KEDILDEAEDRVLKLQDALKEEIL----------DEAQDRILKLIREGFASHVH 284
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
K + + +L+ ++K++ + + + I NG + WK+ + ++
Sbjct: 285 KF-EKSLETFCDGLLKAEMKLSELQDSYSELSFIFQAHQATSFNGQFVWKIPEVARRRQD 343
Query: 327 MKE-INRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFV 382
+ YSA F++S FGY+ C R+ ++ + + ++S F+ +++GE D +L WPF
Sbjct: 344 SRTGKTGSLYSAPFHTSRFGYKLCLRLYLNGDGSGKNTHISFFLTVMRGEYDALLPWPFS 403
Query: 383 GRIRFTALNTS-SEFSITDEIQSDKNFDSFKRP 414
+ L+ S S I + D + SF +P
Sbjct: 404 QMVTLMLLDQSGSSNHIVQCFKPDPSSSSFWKP 436
>gi|124295371|gb|ABN04153.1| tumor necrosis factor receptor-associated factor 4 [Branchiostoma
belcheri]
Length = 465
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+G WK+ + AK KE K N S F++ GY+ V + + +LSL+
Sbjct: 307 DGTLLWKIADIDAKFKEAKASNNCELVSPPFFTGKHGYKLSLSVFLNGNGSGEGSHLSLY 366
Query: 366 IHLVQGENDDILDWPFVGRIRFTALN----TSSEFSITDEIQSDKNFDSFKRPVNFFLNK 421
+ L+ GE D +L WPF + F ++ T+ +T+ D + F++P + +K
Sbjct: 367 VRLLPGEYDSLLQWPFTHAMTFMVMDQGDPTNKREHLTESFIPDPTWKHFQKPSHH--DK 424
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
K+ GF V+ RG++++D F+
Sbjct: 425 KSLGFGYPQFVSHHTLKTRGYIVDDCLFI 453
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R+ C +C ++ D + +T+CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RWLCPLCHLHMNDPVQITTCGHRFCDTCLQEFLS-EGVFECPEDKLALDYAKIYPDEDMH 73
Query: 75 REILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
EIL + C + C + + H+ TC
Sbjct: 74 EEILNTKVRCSHWTDGCYWVDKVTRLQDHLRTC 106
>gi|444520258|gb|ELV12939.1| TNF receptor-associated factor 5 [Tupaia chinensis]
Length = 330
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 16/195 (8%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL 324
LL+ +R+V+LE + +N + L + EE + NG WK+ ++ K
Sbjct: 140 LLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKK 199
Query: 325 KEMKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
KE + ++ GYR C R ++ + + +LSL+ +++GE D +L WPF
Sbjct: 200 KEAVD---------GHTVRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPF 250
Query: 382 VGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGR 440
R+ L+ S + + I + ++D N SFKRP A G F+ L+ +
Sbjct: 251 RQRVTLMLLDQSGKRNHIVETFRADPNSSSFKRPDGEM--NIASGCPRFV-AHSTLENAK 307
Query: 441 GFLMEDDTFVIKTQV 455
++DDT +K V
Sbjct: 308 NTFIKDDTLFLKVAV 322
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++++ ++ +
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCHHCILSLRELNAVPICPVDKEIIKSQEVLASHI 98
Query: 73 TRREILE 79
+ LE
Sbjct: 99 DKSAWLE 105
>gi|405973121|gb|EKC37852.1| TNF receptor-associated factor 3 [Crassostrea gigas]
Length = 581
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDE---KVLTKDDI 67
+ +D ++ C +C L+DA+ T CGH+ C C+D+++ CP E ++L D I
Sbjct: 43 VGVDSKYVCVLCNNVLQDAVQTQCGHRLCQPCVDTYLQDGQPRPCPYQEEFCEMLQADQI 102
Query: 68 FIDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLK 108
D RREI + + C K C L E E H+ C+ +
Sbjct: 103 LRDASARREIRQLPVYCSNKSRGCQKTLKWKELEKHLTECWFE 145
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 311 GVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFI 366
GV WK+ N+ + ++ + YS+ F++S +GY+ C+R ++ + + S+F
Sbjct: 428 GVLIWKITNYRRRKQDAVSGTAVSIYSSPFFTSRYGYKMCSRAYLNGDGMGKGTHFSIFF 487
Query: 367 HLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPV 415
++QGE D +L WPF ++ F L+ + ++D + D + SFKRP+
Sbjct: 488 VVMQGEYDALLSWPFRQKVTFMILDQNGNRRHLSDSFRPDPDSSSFKRPL 537
>gi|242012097|ref|XP_002426777.1| TNF receptor-associated factor, putative [Pediculus humanus
corporis]
gi|212510959|gb|EEB14039.1| TNF receptor-associated factor, putative [Pediculus humanus
corporis]
Length = 454
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLF 365
+G WK+ +F KL E K + S FY+S +GY+ ++ A +LS++
Sbjct: 297 SGTLIWKISDFTVKLSEAKSKDGVELVSPPFYTSQYGYKLQASAFLNGNGAGESTHLSVY 356
Query: 366 IHLVQGENDDILDWPFVGRIRFTAL----NTSSEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT NT ++ + D + +F RP +
Sbjct: 357 IKILPGEYDALLRWPFSHSVSFTLFDQSPNTEKACNVVESFIPDPTWKNFLRPSK-EPDS 415
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF FI D+L + + + DDT ++ +V
Sbjct: 416 LGFGFPRFIS-HDLLH--KRYFIRDDTLFLRVKV 446
>gi|15451442|dbj|BAB64525.1| hypothetical protein [Macaca fascicularis]
Length = 352
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+
Sbjct: 189 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 248
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 249 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 308
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ F D+ R ++ +D F+
Sbjct: 309 LDESSLGFGYPKFNSHQDIRK--RNYVRDDAVFI 340
>gi|260820622|ref|XP_002605633.1| hypothetical protein BRAFLDRAFT_115711 [Branchiostoma floridae]
gi|229290968|gb|EEN61643.1| hypothetical protein BRAFLDRAFT_115711 [Branchiostoma floridae]
Length = 219
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 251 EGDCSCKTCGDNS---HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
E C K C NS HL + + L+ Q + QK ++ L+ +D
Sbjct: 8 ESGCKHK-CPRNSLDRHLQQESGSHLKLMCQLVSRQKNDISQLRNQLQTVTTNQD----- 61
Query: 308 LCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNI---SREDAQYLS 363
G WK+ + AK KE K N S F++ GY+ V + + +LS
Sbjct: 62 ---GTLLWKISDIDAKFKEAKASNNCELVSPPFFTGKHGYKLSLSVFLNGNGSGEGSHLS 118
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALN----TSSEFSITDEIQSDKNFDSFKRPVNFFL 419
L++ L+ GE D +L WPF + F L+ T+ +T+ D + F++P +
Sbjct: 119 LYVRLLPGEYDSLLQWPFTHAMTFMVLDQGDPTNKREHLTESFIPDPTWKHFQKPSHH-- 176
Query: 420 NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+KK+ GF V+ RG++++D ++
Sbjct: 177 DKKSLGFGYPQFVSHQTLKTRGYVVDDCLYI 207
>gi|149041056|gb|EDL95013.1| rCG20229 [Rattus norvegicus]
Length = 292
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 38 QLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNSVPICPVDKEVIKPQEVFKDN 97
Query: 72 YTRREILENNLTCP-YKQCSSQLSIPEYESHVNTC 105
+RE+L ++ C C++++ + ++ H+ C
Sbjct: 98 CCKREVLNLHVYCKNAPGCNARIILGRFQDHLQHC 132
>gi|428698216|pdb|4GJH|A Chain A, Crystal Structure Of The Traf Domain Of Traf5
gi|428698217|pdb|4GJH|B Chain B, Crystal Structure Of The Traf Domain Of Traf5
gi|428698218|pdb|4GJH|C Chain C, Crystal Structure Of The Traf Domain Of Traf5
Length = 178
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G WK+ ++ K +E E + +S FY+S GYR C R ++ + +LSL+
Sbjct: 23 SGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLY 82
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRP---VNFFLNK 421
+++GE D +L WPF R+ L+ S + + I + ++D N SFKRP +N
Sbjct: 83 FVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIVETFKADPNSSSFKRPDGEMNI---- 138
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ + L+ + ++DDT +K V
Sbjct: 139 -ASGCPRFVSHS-TLENSKNTYIKDDTLFLKVAV 170
>gi|449666691|ref|XP_002156351.2| PREDICTED: TNF receptor-associated factor 5-like [Hydra
magnipapillata]
Length = 375
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Query: 289 NFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK--EINRYFYSACFYSSCFGY 346
N L+L T+ + NG++ W + NF + + K E ++ YS FY++ +GY
Sbjct: 196 NDHLSLAMTKLLIHECRFVCTNGIFVWAVPNFRVQFEAAKISEEDKAVYSHPFYTAQYGY 255
Query: 347 RFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEI 402
+ +V ++ D ++SL++ +++G+ D++LDWPF +I F L+ S ++
Sbjct: 256 KLRIKVYLNGRDRGKGTHISLYLIIMKGDYDNLLDWPFNHKITFYLLDQSVHRKHKVHQL 315
Query: 403 QSDKNFDSFKRPVNFFLNKKAFGFNN--FIRVADVLDPGRGFLMEDDTFVIKTQV 455
+++ + + N +K+ G N F+ ++ G ++DDT IK ++
Sbjct: 316 SPNRSLPNVRAVFNQPTSKENLGIGNPSFVSHESMIAGG---YIKDDTLFIKCEI 367
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 75/205 (36%), Gaps = 40/205 (19%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L +EC IC +D + + CGH+FC +CI+ KG CP+D +++ I+
Sbjct: 21 LQSDYECPICQCAFRDPVQIEECGHRFCLSCINEIKKQKGTLKCPLDRQLIN-----IEK 75
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNT-----------CYLKYSQPSVEDITDS 120
+ N+ CP + C H+ C KY V+
Sbjct: 76 EHVKSCPYENIVCPNELCQDLFPRGTLSQHLEQRCKFRSVFCQFCSEKYIHKDVK----- 130
Query: 121 PTSSFRNTSGIP---TNKRNSKILTVTVFPEHLNMQGSSNENFP-----CKFYQVGCREV 172
S ++ P NK K + HL E P C F ++GC E
Sbjct: 131 --SHLKHCKKFPMECVNKCEKKDIPREKMASHL-------EECPFSIALCPFSEIGC-EF 180
Query: 173 FKSQALLEKHYDLKTSFHLELLFNK 197
+ +LE H L + HL L K
Sbjct: 181 SGKKDVLENHVTLAVNDHLSLAMTK 205
>gi|195576499|ref|XP_002078113.1| GD23279 [Drosophila simulans]
gi|194190122|gb|EDX03698.1| GD23279 [Drosophila simulans]
Length = 483
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 283 RQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMA 342
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 343 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 402
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 403 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 459
Query: 439 GRGFLMEDDTFV 450
R F+ D F+
Sbjct: 460 SRPFIKGDTVFL 471
>gi|195401349|ref|XP_002059276.1| GJ16121 [Drosophila virilis]
gi|194156150|gb|EDW71334.1| GJ16121 [Drosophila virilis]
Length = 493
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 292 LNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFG 345
L+ +Q ++I+ + V KL G WK+ ++ AK+ E + + S FY+S +G
Sbjct: 314 LSTRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMNEARGKDGLELVSPPFYTSQYG 373
Query: 346 YRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN---TSSEFSIT 399
Y+ + ++ ++S++I ++ GE D +L WPF I FT S + +
Sbjct: 374 YKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVA 433
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D +++F+RP N ++ FGF FI + L R F+ D F+
Sbjct: 434 ESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLHSRPFIKSDTVFL 481
>gi|350596523|ref|XP_003484286.1| PREDICTED: TNF receptor-associated factor 4-like [Sus scrofa]
Length = 481
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 315 WKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQ 370
WK+ ++ +L+E K + N +S FY+ +GY+ + + +LSL+I ++
Sbjct: 323 WKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLP 382
Query: 371 GENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL----NK 421
G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P + +
Sbjct: 383 GAFDNLLEWPFARRVTFSLLDQSEPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESS 442
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
FG+ FI D+ R ++ +D F+
Sbjct: 443 LGFGYPKFISHQDIRK--RNYVRDDAVFI 469
>gi|194856022|ref|XP_001968660.1| GG24997 [Drosophila erecta]
gi|190660527|gb|EDV57719.1| GG24997 [Drosophila erecta]
Length = 486
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 286 RQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMA 345
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 346 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 405
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 406 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 462
Query: 439 GRGFLMEDDTFV 450
R F+ D F+
Sbjct: 463 SRPFIKGDTVFL 474
>gi|442625853|ref|NP_001097080.2| TNF-receptor-associated factor 4, isoform E [Drosophila
melanogaster]
gi|440213304|gb|ABV53619.2| TNF-receptor-associated factor 4, isoform E [Drosophila
melanogaster]
Length = 477
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 277 RQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMA 336
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 337 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 396
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 397 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 453
Query: 439 GRGFLMEDDTFV 450
R F+ D F+
Sbjct: 454 SRPFIKGDTVFL 465
>gi|17137644|ref|NP_477416.1| TNF-receptor-associated factor 4, isoform A [Drosophila
melanogaster]
gi|4959432|gb|AAD34346.1|AF119794_1 TNF-receptor-associated factor 1 [Drosophila melanogaster]
gi|7295719|gb|AAF51024.1| TNF-receptor-associated factor 4, isoform A [Drosophila
melanogaster]
gi|20151571|gb|AAM11145.1| LD20987p [Drosophila melanogaster]
gi|220943150|gb|ACL84118.1| Traf4-PA [synthetic construct]
gi|220953234|gb|ACL89160.1| Traf4-PA [synthetic construct]
Length = 486
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 286 RQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMA 345
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 346 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 405
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 406 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 462
Query: 439 GRGFLMEDDTFV 450
R F+ D F+
Sbjct: 463 SRPFIKGDTVFL 474
>gi|198414996|ref|XP_002121961.1| PREDICTED: similar to TNF receptor-associated factor 3 (CD40
receptor-associated factor 1) (CRAF1) (CD40-binding
protein) (CD40BP) (LMP1-associated protein) (LAP1)
(CAP-1) [Ciona intestinalis]
Length = 369
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV WK+ +F + +E + YS FY+S +GY+ C RV ++ + ++SLF
Sbjct: 216 SGVVIWKIRDFSRRKREAVSGRTLSLYSQPFYTSRYGYKMCARVYLNGDGMGKGTHMSLF 275
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVN 416
+++GE D +L WPF ++ L+ + ++D + D SFK+P +
Sbjct: 276 FVVMKGEYDALLPWPFRQKVTLMLLDQGMDRRHLSDTFRPDPTSSSFKKPTS 327
>gi|194766261|ref|XP_001965243.1| GF21137 [Drosophila ananassae]
gi|190617853|gb|EDV33377.1| GF21137 [Drosophila ananassae]
Length = 488
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 288 RQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMA 347
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 348 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 407
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 408 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 464
Query: 439 GRGFLMEDDTFV 450
R F+ D F+
Sbjct: 465 SRPFIKGDTVFL 476
>gi|195471240|ref|XP_002087913.1| Traf1 [Drosophila yakuba]
gi|194174014|gb|EDW87625.1| Traf1 [Drosophila yakuba]
Length = 506
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 306 RQMLEAHLESNAAVHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMA 365
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 366 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 425
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 426 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 482
Query: 439 GRGFLMEDDTFV 450
R F+ D F+
Sbjct: 483 SRPFIKGDTVFL 494
>gi|345318363|ref|XP_001521136.2| PREDICTED: TNF receptor-associated factor 4-like, partial
[Ornithorhynchus anatinus]
Length = 276
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 24/192 (12%)
Query: 281 LEQKIKVN---NFELNLKQTEEIED-----NVVLKLCNGVYFWKMYNFPAKLKEMK-EIN 331
LE +K++ + L +Q +E+++ + +GV W++ + +L+E + N
Sbjct: 75 LEDSVKLHLGLTWALVSRQRQELQELRRDVEELAAGSDGVLVWRIGGYGRRLQEARGRPN 134
Query: 332 RYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFT 388
S FY+ +GYR + + +LSL+I ++ G+ D++L+WPF R+ F+
Sbjct: 135 HECLSRPFYTHKYGYRLQVSAFLNGNGSGEGTHLSLYIRVLPGDYDNLLEWPFALRVTFS 194
Query: 389 ALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFLNKK-----AFGFNNFIRVADVLDP 438
L+ S +T+ D ++ +F++P + + FG+ FI D+
Sbjct: 195 LLDQSDPSLSKPQHVTETFHPDPHWKNFQKPGAWRGSGSSGAALGFGYPKFISHEDIRK- 253
Query: 439 GRGFLMEDDTFV 450
R ++ +D F+
Sbjct: 254 -RDYVRDDAVFI 264
>gi|198412505|ref|XP_002124772.1| PREDICTED: similar to tumor necrosis factor receptor-associated
factor 3 [Ciona intestinalis]
Length = 354
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV WK+ +F + +E + YS FY+S +GY+ C RV ++ + ++SLF
Sbjct: 201 SGVVIWKIRDFSRRKREAVSGRTLSLYSQPFYTSRYGYKMCARVYLNGDGMGKGTHMSLF 260
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVN 416
+++GE D +L WPF ++ L+ + ++D + D SFK+P +
Sbjct: 261 FVVMKGEYDALLPWPFRQKVTLMLLDQGMDRRHLSDTFRPDPTSSSFKKPTS 312
>gi|195437833|ref|XP_002066844.1| GK24337 [Drosophila willistoni]
gi|194162929|gb|EDW77830.1| GK24337 [Drosophila willistoni]
Length = 489
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 292 LNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFG 345
L+ +Q ++I+ + V KL G WK+ ++ AK+ E + + S FY+S +G
Sbjct: 310 LSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMSEARGKDGLELISPPFYTSQYG 369
Query: 346 YRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN---TSSEFSIT 399
Y+ + ++ ++S++I ++ GE D +L WPF I FT S + +
Sbjct: 370 YKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVA 429
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D +++F+RP N ++ FGF FI + L R F+ D F+
Sbjct: 430 ESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLHSRPFIKADTVFL 477
>gi|198475265|ref|XP_001356990.2| GA15869 [Drosophila pseudoobscura pseudoobscura]
gi|198138744|gb|EAL34056.2| GA15869 [Drosophila pseudoobscura pseudoobscura]
Length = 493
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 23/197 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 293 RQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMT 352
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 353 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 412
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 413 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 469
Query: 439 GRGFLMEDDTFVIKTQV 455
R F+ +D+T ++ +V
Sbjct: 470 SRPFI-KDNTVFLRVKV 485
>gi|195118018|ref|XP_002003537.1| GI22040 [Drosophila mojavensis]
gi|193914112|gb|EDW12979.1| GI22040 [Drosophila mojavensis]
Length = 489
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 292 LNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFG 345
L+ +Q ++I+ + V KL G WK+ ++ AK+ E + + S FY+S +G
Sbjct: 310 LSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMNEARGKDGLELVSPPFYTSQYG 369
Query: 346 YRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN---TSSEFSIT 399
Y+ + ++ ++S++I ++ GE D +L WPF I FT S + +
Sbjct: 370 YKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVA 429
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D +++F+RP N ++ FGF FI + L R F+ D F+
Sbjct: 430 ESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLHSRPFIKADTVFL 477
>gi|195342435|ref|XP_002037806.1| GM18466 [Drosophila sechellia]
gi|194132656|gb|EDW54224.1| GM18466 [Drosophila sechellia]
Length = 520
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 320 RQMLETHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMA 379
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 380 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 439
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 440 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 496
Query: 439 GRGFLMEDDTFV 450
R F+ D F+
Sbjct: 497 SRPFIKGDTVFL 508
>gi|391326125|ref|XP_003737575.1| PREDICTED: TNF receptor-associated factor 4-like [Metaseiulus
occidentalis]
Length = 320
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ +KL + K + Y S F +S GYR + + + +LS++
Sbjct: 163 TGTLLWKIPDYSSKLNDSKSKDGYEVCSPPFLTSAHGYRLQASLFLNGNGSGEGSHLSVY 222
Query: 366 IHLVQGENDDILDWPFVGRIRFT----ALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT LN I + D + +F+RP +
Sbjct: 223 IKILPGEYDALLRWPFSLTVSFTLIDQPLNPDKACHIVESFVPDPTWKNFQRPSK-EPDA 281
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTE 457
FGF F+ ++L + + DDT IK +V E
Sbjct: 282 LGFGFPRFVS-HEMLK--KCHYLRDDTLFIKVKVDE 314
>gi|5714381|gb|AAD47894.1|AF079837_1 TRAF1 [Drosophila melanogaster]
gi|10716152|gb|AAG21891.1|AF111422_1 TRAF1 [Drosophila melanogaster]
Length = 412
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 278 QSMLEQKIKVNN-------FELNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLK 325
+ MLE ++ N L+ +Q ++I+ + V KL G WK+ ++ AK+
Sbjct: 212 RQMLEAHLESNAAAHLSLMVALSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMA 271
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + S FY+S +GY+ + ++ ++S++I ++ GE D +L WPF
Sbjct: 272 EARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPF 331
Query: 382 VGRIRFTALN---TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
I FT S + + + D +++F+RP N ++ FGF FI + L
Sbjct: 332 SHSITFTLFEQGAQSGQGGVAESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLH 388
Query: 439 GRGFLMEDDTFV 450
R F+ D F+
Sbjct: 389 SRPFIKGDTVFL 400
>gi|198412769|ref|XP_002123819.1| PREDICTED: similar to tumor necrosis factor receptor-associated
factor 3 [Ciona intestinalis]
Length = 351
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+GV WK+ +F + +E + YS FY+S +GY+ C RV ++ + ++SLF
Sbjct: 198 SGVVIWKIRDFSRRKREAVSGRTLSLYSQPFYTSRYGYKMCARVYLNGDGMGKGTHMSLF 257
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVN 416
+++GE D +L WPF ++ L+ + ++D + D SFK+P +
Sbjct: 258 FVVMKGEYDALLPWPFRQKVTLMLLDQGMDRRHLSDTFRPDPTSSSFKKPTS 309
>gi|195051926|ref|XP_001993199.1| GH13208 [Drosophila grimshawi]
gi|193900258|gb|EDV99124.1| GH13208 [Drosophila grimshawi]
Length = 490
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 292 LNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFG 345
L+ +Q ++I+ + V KL G WK+ ++ AK+ E + + S FY+S +G
Sbjct: 311 LSTRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMNEARGKDGLELVSPPFYTSQYG 370
Query: 346 YRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN---TSSEFSIT 399
Y+ + ++ ++S++I ++ GE D +L WPF I FT S + +
Sbjct: 371 YKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVA 430
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D +++F+RP N ++ FGF FI L R F+ D F+
Sbjct: 431 ESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--THELLHSRPFIKSDTVFL 478
>gi|405978078|gb|EKC42493.1| TNF receptor-associated factor 3 [Crassostrea gigas]
Length = 160
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + ++ K YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 7 NGVLMWKIRDYSRRKQDAKSGRTISLYSQPFYTGRFGYKMCARVYLNGDGVGKGTHLSLF 66
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVN 416
+ +GE D +L WPF ++ L+ + + D + D SFKRP +
Sbjct: 67 FVVQRGEYDALLPWPFKQKVSLMLLDQDNGTRHLVDSFRPDITSSSFKRPTS 118
>gi|291223095|ref|XP_002731549.1| PREDICTED: TNF receptor-associated factor 5-like [Saccoglossus
kowalevskii]
Length = 570
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G WK+ NF + +E + YS FY+S GY+ C RV ++ + ++SLF
Sbjct: 417 DGKLIWKIKNFARRKQEALTGKTLSLYSQPFYTSNHGYKMCARVYLNGDGMGKGTHMSLF 476
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVN 416
++ G+ D +L WPF ++ L+ + +++D + D SFKRP
Sbjct: 477 FVVMGGDYDALLQWPFRQKVTLVLLDQETGRRNLSDTFRPDPTSSSFKRPTG 528
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDE--KVLTKDDIFIDNYTR 74
+ C IC + L+ + CGH+FC C ++ + K CP+++ + + +++I D+ R
Sbjct: 41 YVCHICQKVLRSPVQLECGHRFCNFCCNNLVKQSDKPVCPVNDCKEPVNREEIVRDHAAR 100
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R++L + C +K C+ Q+ + E+H+ C
Sbjct: 101 RDVLSLIVFCNFKSKGCNIQVKLKNLENHLQEC 133
>gi|432843764|ref|XP_004065654.1| PREDICTED: TNF receptor-associated factor 5-like [Oryzias latipes]
Length = 584
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 284 KIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY--FYSACFYS 341
++ V LN + +E+E L +G WK+ +F K +E + ++ S F++
Sbjct: 405 ELHVAQLALNKQHLQELE----LTSYDGRLIWKIKDF-QKRREAEATGQHPCLSSVPFHT 459
Query: 342 SCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSI 398
GY+ + ++ + +LSL++ L+ G+ D +L WPF + + L+ S +
Sbjct: 460 GRCGYKMAMKAYLNGDGEGRGTHLSLYVVLMPGDFDALLPWPFKQTVSLSVLDQSGARNH 519
Query: 399 TD-EIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D F +P + A GF FI + + PG ++DDT +K +V
Sbjct: 520 QSFNFRPDPTNTCFHQPAAESASNVAVGFPCFISLDALEAPGNAVYVKDDTLFVKVKV 577
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWID--VKGKNYCPIDEKVLTKDDIF 68
+ L F C IC + + SCGH +C C+ ++ + CP+++ +T ++F
Sbjct: 60 MKLKEEFICPICKGVVLNPQQNSCGHIYCFHCLQGLLESSLLSGPVCPVEKAAITPSEVF 119
Query: 69 IDNYTRREILENNLTCPYKQ-CSSQLSIPEYESHVNTC 105
DN +REI + C C+S L++ + + H+ +C
Sbjct: 120 QDNCCKREISSLEVYCTNSPLCTSVLALNQLQEHLKSC 157
>gi|328794217|ref|XP_003252022.1| PREDICTED: TNF receptor-associated factor 6-A-like, partial [Apis
mellifera]
Length = 62
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 10 KLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWI 47
K +L+PRFEC ICL +L+D +LTSCGHKFC+ CI +W+
Sbjct: 25 KESLEPRFECPICLTWLRDPVLTSCGHKFCSQCIYTWL 62
>gi|157113963|ref|XP_001652160.1| tnf receptor associated factor [Aedes aegypti]
gi|108877524|gb|EAT41749.1| AAEL006649-PA [Aedes aegypti]
Length = 481
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 292 LNLKQTEEIE--DNVVLKLCN---GVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFG 345
L+ +Q ++I N + KL G WK+ ++ AK+ E K + S FY+S +G
Sbjct: 302 LSGRQGQQINMLKNAMAKLSTNYTGTLLWKITDWSAKMVEAKSKDGLELVSPPFYTSQYG 361
Query: 346 YRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTAL---NTSSEFSIT 399
Y+ + + + ++S++I ++ GE D +L WPF + FT S+ +
Sbjct: 362 YKLQASMFLNGNGPGEGTHVSVYIKVLPGEYDALLKWPFSHSVTFTLFEQGTLGSQGGVA 421
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D ++++F+RP + + FGF F V+ L R F+ ED F+
Sbjct: 422 ESFVPDPSWENFQRP-STEPDALGFGFPRF--VSHELLNRRPFVREDTVFL 469
>gi|390333230|ref|XP_783477.3| PREDICTED: TNF receptor-associated factor 3-like
[Strongylocentrotus purpuratus]
Length = 637
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G WK+ F + ++ YS FY+S FGY+ C R+ ++ + ++SLF
Sbjct: 484 DGTLIWKIKEFARRKRDADNGKTLSLYSQPFYTSRFGYKMCARIYLNGDGIGKGTHVSLF 543
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++G+ D +L WPF ++ L+ + ++D + D SF+RP A
Sbjct: 544 FVVMKGDYDALLPWPFSQKVTLMLLDQETGRRHLSDSFRPDPTSTSFQRPSTNM--NIAS 601
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ + + DP +++DT IK V
Sbjct: 602 GCPLFVSQSVLKDPA---YVKEDTIFIKVVV 629
>gi|156334796|ref|XP_001619526.1| hypothetical protein NEMVEDRAFT_v1g224093 [Nematostella vectensis]
gi|156202928|gb|EDO27426.1| predicted protein [Nematostella vectensis]
Length = 177
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDNYTRR 75
+ C IC L+ + T CGH+FC C+D K + CP+D + L K D+F+D R
Sbjct: 23 YTCRICHLPLRVPVQTKCGHRFCKECLDEASRRKSRAECPMDREPLDLKKDVFLDKAAER 82
Query: 76 EILENNLTCPYKQCSSQLSIPEYESHVNTC 105
IL + CP K C + + + E + C
Sbjct: 83 TILSFLVKCPCKGCKWEAELRDLEVSMKGC 112
>gi|357613693|gb|EHJ68664.1| putative tnf receptor associated factor [Danaus plexippus]
Length = 445
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSL 364
C+G W++ ++ AK+ + K + S FY+S +GY+ + ++ A ++S+
Sbjct: 287 CSGALVWRVTDWAAKMADAKTKDGVELTSPAFYTSQYGYKLQATLFLNGNGAGEGTHISV 346
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSE----FSITDEIQSDKNFDSFKRPVNFFLN 420
+I ++ GE D +L WPF + FT + SS +I + D + +F+RP +
Sbjct: 347 YIKILPGEYDALLRWPFAHSVSFTLFDQSSSPERACNIVESFVPDPTWKNFQRPSK-EPD 405
Query: 421 KKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F V+ + R F+ +DD ++ +V
Sbjct: 406 ALGFGFPRF--VSHEMLKKRNFV-KDDVMFLRVKV 437
>gi|156356145|ref|XP_001623790.1| predicted protein [Nematostella vectensis]
gi|156210521|gb|EDO31690.1| predicted protein [Nematostella vectensis]
Length = 399
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%)
Query: 15 PRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
P C ICL + +LT CGH FC C + W + K CP+D K L + D T
Sbjct: 23 PELMCGICLMVVNKPVLTYCGHSFCNFCFNKWRNGKDVVTCPVDYKQLETNQFMADKKTE 82
Query: 75 REILENNLTCPYKQCSSQLSIPEYESHVNTC 105
R++L + C CS + + + + H+ C
Sbjct: 83 RQVLSLCVKCMNGPCSWKGELRDKKKHLTKC 113
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 283 QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSS 342
+KI+ NN E+ E N ++ G + F ++ + K++ YS FY+S
Sbjct: 223 KKIRGNNKEIETLHKELNTANQTIRELKGKMAKLIGTFVWRICDYKDLYGEIYSPSFYTS 282
Query: 343 CFGYRFCTRVNISR---EDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE---- 395
+GY+ + N+ +LSL+ ++ GE D +L+WPF +I ++ S +
Sbjct: 283 KYGYKVQLKANLRTNPFNGGTHLSLYACIMVGEYDALLEWPFRRKITLYVIDQSDQRKHE 342
Query: 396 --FSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKT 453
D++ D+ F RP+ N +G F+ + ++ G ++D IK
Sbjct: 343 TLLINPDDVLPDRK-KCFHRPITG--NNVGYGLTRFLSLEELTSGG---FIKDGVMFIKA 396
Query: 454 QV 455
V
Sbjct: 397 VV 398
>gi|170037692|ref|XP_001846690.1| tnf receptor associated factor [Culex quinquefasciatus]
gi|167880974|gb|EDS44357.1| tnf receptor associated factor [Culex quinquefasciatus]
Length = 486
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 30/269 (11%)
Query: 198 YCSDGSQSTNTPSHG----RQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGD 253
+CS + +HG R + +A M + +S L D K A S D
Sbjct: 220 HCSREFSADTLSAHGATCPRSPVPCPQRCDAGPMARADLDSHLRDECK--ALSVPCSFKD 277
Query: 254 CSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIE--DNVVLKLCN- 310
C+ G HLL+ E S++ L+ +Q ++I N + KL
Sbjct: 278 AGCRFKGPR-HLLEAHLESNTSAHLSLM--------VALSGRQGQQITMLKNAMAKLSTN 328
Query: 311 --GVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNI---SREDAQYLSL 364
G WK+ ++ AK+ E K + S FY+S +GY+ + + ++ ++S+
Sbjct: 329 YTGTLLWKITDWSAKMVEAKSKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGESTHVSV 388
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSS---EFSITDEIQSDKNFDSFKRPVNFFLNK 421
+I ++ GE D +L WPF + FT + + + + D ++++F+RP + +
Sbjct: 389 YIKVLPGEYDALLKWPFSHSVTFTLFEQGTLGGQGGVAESFVPDPSWENFQRPSS-EPDA 447
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
FGF F V+ L R F+ ED F+
Sbjct: 448 LGFGFPRF--VSHELLNRRPFVREDTVFL 474
>gi|159164697|pdb|2JMD|A Chain A, Solution Structure Of The Ring Domain Of Human Traf6
Length = 63
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 3 LGSKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 61
Query: 73 TR 74
+
Sbjct: 62 AK 63
>gi|340377030|ref|XP_003387033.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 383
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 286 KVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY--FYSACFYSSC 343
++ E + Q E I + +G WK+ F ++ + + +Y +S F SS
Sbjct: 211 QIRILEDKVAQLETITMSFCYGNFDGSMVWKIPQFSQRMDDART-GKYTSIFSLPFSSSR 269
Query: 344 FGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITD 400
GY+ C R+ I + ++SLF +++GE D +L WPF ++ F +N +
Sbjct: 270 NGYKMCLRLYILGDGIGKGTHMSLFFVVMKGEYDALLQWPFTHKVTFKLINQCGKRDAVQ 329
Query: 401 EIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
Q D SF++P + A G F+ ++++ G + DDT IK +V T
Sbjct: 330 AFQPDPLSSSFQKPKSDM--NVASGCPRFVSKNELMEGG---FIVDDTIFIKVKVDTAT 383
>gi|73972033|ref|XP_855528.1| PREDICTED: TNF receptor-associated factor 1 [Canis lupus
familiaris]
Length = 413
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 334 FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L
Sbjct: 288 LFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLL 347
Query: 391 NTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ ++ D + D + SF+RP + A G F ++ + P ++ +DDT
Sbjct: 348 DQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSRLQSPKHAYV-KDDTMF 404
Query: 451 IKTQV 455
+K V
Sbjct: 405 LKCIV 409
>gi|294884837|gb|ADF47429.1| TNF receptor-associated factor-2-like protein A [Dugesia japonica]
Length = 356
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 303 NVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED--- 358
NV+ + N + WK +F + + + R S FY+S FGY+ C RV + +
Sbjct: 197 NVIFR--NASFIWKFTDFEVRRVDAESGGRVSVTSDAFYTSEFGYKMCLRVYPAGDGVGK 254
Query: 359 AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNF 417
+LS+F +++GE DD+L WPF ++ + L+ S +D + D +++P +
Sbjct: 255 GTHLSVFFAIMKGEFDDLLSWPFKQKVTLSILDQESGSKPHSDTFKPDARSACYQKPTDE 314
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEM 458
A GF FI ++ +++ ++DT +K V M
Sbjct: 315 C--NIASGFPKFILLSLIMN--NSIYCKNDTIFLKIAVDTM 351
>gi|405978080|gb|EKC42495.1| TNF receptor-associated factor 3 [Crassostrea gigas]
Length = 498
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 243 QAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIED 302
+AG G +C+ G+N L L+ R ++ M Q I+ N+
Sbjct: 301 RAGPSGGEGG--ACQPRGENDQRLALLDARFADIDLRM--QVIETVNY------------ 344
Query: 303 NVVLKLCNGVYFWKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRFCTRVNISRED--- 358
GV WK+ ++ + ++ K YS FY+ F Y+ C RV ++ +
Sbjct: 345 -------GGVLMWKIRDYNLRKQDAKAGKTNSLYSQPFYTGPFWYKMCARVYLNGDGMGK 397
Query: 359 AQYLSLFIHLVQGENDDILDWPFVGRIRFTALN-TSSEFSITDEIQSDKNFDSFKRPVNF 417
+LSLF + +GE D +L WPF ++ L+ + + D + D S++RPV
Sbjct: 398 GTHLSLFFVVQKGEYDALLPWPFKQKVTLMLLDQQNGSRHVVDSFRPDTTSSSYQRPVTE 457
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G FI + P + DDT IK V
Sbjct: 458 M--NIASGCPLFISHVVLETP---TYLRDDTIFIKVVV 490
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWI--DVKGKNYCPIDEK---VLTKD 65
++L F C +C L++A+ T CGH+ CA C+ + + G CP+ + VL ++
Sbjct: 49 VSLTDNFRCPVCWGVLREAVQTRCGHRACAQCVRDLLAGNPGGVVPCPVSDDTCVVLKEE 108
Query: 66 DIFIDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNT 104
+I D RREI + + C ++ C L ESH T
Sbjct: 109 EIHRDVSMRREIHKLEVYCNFRNEGCREILPWNALESHEET 149
>gi|242247441|ref|NP_001156217.1| ring finger protein 5-like [Acyrthosiphon pisum]
gi|239791953|dbj|BAH72376.1| ACYPI006552 [Acyrthosiphon pisum]
Length = 183
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICLE KDA+++ CGH FC C+ W++ + G+ CP+ + V+ KD + I Y R
Sbjct: 30 FECNICLENAKDAVVSVCGHLFCWPCLHQWLETRSGRQVCPVCKAVINKDKV-IPIYGR 87
>gi|340384829|ref|XP_003390913.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 459
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 334 FYSACFYS---SCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRF 387
+S FYS S GY+ C R+ I + ++SLF L++GE D+IL WPF ++
Sbjct: 334 MFSPSFYSNPTSRCGYKMCLRLYILGDGIGKGTHMSLFFVLMKGEFDNILQWPFTHKVTL 393
Query: 388 TALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+N + D +Q D SF++P + A G F+ + ++++ G + DD
Sbjct: 394 KLINQYGGRDVIDLLQPDPLSSSFQKPKSDM--NAASGCPRFVSIDELMEGG---FIVDD 448
Query: 448 TFVIKTQV 455
T IK +V
Sbjct: 449 TIFIKVEV 456
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN--YCP---IDEKVLTKDD--IF 68
++ C C L DA+ TSCGH C C D K YCP DE + ++ F
Sbjct: 42 KYVCPKCEHILTDAVQTSCGHWLCHDCADGIFKKMPKETLYCPRADCDEALTAEEGRPFF 101
Query: 69 IDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
D + R+EI + C ++ CS + + E +H+ TC
Sbjct: 102 PDRFVRKEISRFVVACINRKFGCSWEGKLGELGNHLWTC 140
>gi|270013417|gb|EFA09865.1| hypothetical protein TcasGA2_TC012013 [Tribolium castaneum]
Length = 2479
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRV----NISREDAQYLSL 364
+G WK+ +F K+ E K + S FY+S +GY+ + N + ED+ ++S+
Sbjct: 309 SGTLIWKISDFSEKMTEAKNKEGMELVSPPFYTSQYGYKLQASLFPNGNGAGEDS-HISV 367
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSS----EFSITDEIQSDKNFDSFKRPVNFFLN 420
+I ++ GE D +L WPF + FT + SS +I + D + +F+RP +
Sbjct: 368 YIKILPGEYDALLRWPFAHSVSFTLFDQSSCPEKACNIVESFIPDPTWKNFQRPSK-EPD 426
Query: 421 KKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
FGF F V+ + R F M+DDT I+
Sbjct: 427 SLGFGFPKF--VSHEMLKKRHF-MKDDTMFIR 455
>gi|321468952|gb|EFX79935.1| hypothetical protein DAPPUDRAFT_51929 [Daphnia pulex]
Length = 398
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 14/155 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRV----NISREDAQYLSL 364
+G + W++ + K+ E + + SA FY+S +GY+ + N S E A Y+S+
Sbjct: 241 SGTFLWRINDVQTKIAEARIKEGFELISAPFYTSQYGYKLQASLFLNGNGSGEGA-YVSI 299
Query: 365 FIHLVQGENDDILDWPFVGRIRFT----ALNTSSEFSITDEIQSDKNFDSFKRPVNFFLN 420
+I ++ GE D +L WPF + FT A N +I + D +++F+RP +
Sbjct: 300 YIKILPGEYDALLKWPFSHTVSFTLYDQAANPDKACNIVESFIPDPTWENFQRPSR-EPD 358
Query: 421 KKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F V+ + R F+ +DD +K +V
Sbjct: 359 ALGFGFPRF--VSHEMLKKRHFV-KDDVLFLKVRV 390
>gi|449679665|ref|XP_002156996.2| PREDICTED: uncharacterized protein LOC100212853, partial [Hydra
magnipapillata]
Length = 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 17 FECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
+C +C L+ I + CGH+FC +C + +G +CP+D KV+ D IF+D R
Sbjct: 204 LKCPVCFLVLRHPIQIEECGHRFCESCFNRLERQQGILFCPLDRKVIDLDKIFLDKAANR 263
Query: 76 EILENNLTCPY--KQCSSQLSIPEYESHVNTC-YLKYSQPS 113
IL + + C Y ++C + ++H+ +C Y++ + P+
Sbjct: 264 AILSSPVKCRYFERECDWVGDLRSIDNHITSCAYVEVACPN 304
>gi|240848615|ref|NP_001155711.1| ring finger protein 5-like [Acyrthosiphon pisum]
gi|239793597|dbj|BAH72908.1| ACYPI007387 [Acyrthosiphon pisum]
Length = 182
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICL+Y KDA+++ CGH FC C+ W++ + + CP+ + V++KD + I Y R
Sbjct: 30 FECNICLDYAKDAVVSVCGHLFCWPCLHQWLETRSSRQVCPVCKAVISKDKV-IPIYGR 87
>gi|47086399|ref|NP_997982.1| tnf receptor-associated factor 4b [Danio rerio]
gi|32698428|emb|CAD89006.1| TRAF4 protein [Danio rerio]
gi|50603841|gb|AAH78361.1| Tnf receptor-associated factor 4b [Danio rerio]
gi|182889872|gb|AAI65750.1| Traf4b protein [Danio rerio]
Length = 478
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY---FYSACFYSSCFGYRFCTRV----NISREDAQYL 362
+G WK+ +F +L+E K +S FYS +GYR N S ED ++
Sbjct: 307 DGTLLWKLTDFSQRLQEAKTRTSGCLELFSPAFYSHNYGYRLQVSAFLNGNGSGEDT-HM 365
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTALNT-----SSEFSITDEIQSDKNFDSFKRPVNF 417
S+++ ++ GE D +L+WPF R+ F+ L+ + IT+ D + +F+RP
Sbjct: 366 SVYLRVLPGEYDGLLEWPFPYRVSFSLLDQCDPALTKPQHITETFSPDPTWKNFQRPRPG 425
Query: 418 FLNK----------KAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
L FG+ FI ++ R ++ ++ F+
Sbjct: 426 ALGSIRGGCLDESMLGFGYPKFISHEEMKK--RNYIRDNAVFI 466
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
+F C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L IF D
Sbjct: 15 KFYCPLCEKPMREPVQVSTCGHRFCDTCLQEYLS-EGVFTCPEDQLPLDYAKIFPDLELE 73
Query: 75 REILENNLTC 84
++IL + C
Sbjct: 74 QQILSLPIRC 83
>gi|38047579|gb|AAR09692.1| similar to Drosophila melanogaster Traf1, partial [Drosophila
yakuba]
Length = 198
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 292 LNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFG 345
L+ +Q ++I+ + V KL G WK+ ++ AK+ E + + S FY+S +G
Sbjct: 19 LSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYG 78
Query: 346 YRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN---TSSEFSIT 399
Y+ + ++ ++S++I ++ GE D +L WPF I FT S + +
Sbjct: 79 YKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVA 138
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D +++F+RP N ++ FGF FI + L R F+ D F+
Sbjct: 139 ESFVPDPTWENFQRPSN-EPDQLGFGFPRFI--SHELLHSRPFIKGDTVFL 186
>gi|332030488|gb|EGI70176.1| TNF receptor-associated factor 4 [Acromyrmex echinatior]
Length = 457
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ AK+ E K + S FY+S +GY+ + + + ++S++
Sbjct: 300 TGTLIWKITDYAAKMSEAKAKEGMELVSPPFYTSQYGYKLQASIFLNGNGTGEGSHISIY 359
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP +
Sbjct: 360 IKILPGEYDALLRWPFSHSVSFTMFDQTVIAEKACNIVESFIPDPTWKNFQRPSR-EPDS 418
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F V+ + R F+ +DDT I+ +V
Sbjct: 419 LGFGFPRF--VSHEMVKKRHFV-KDDTMFIRVKV 449
>gi|383852264|ref|XP_003701648.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Megachile
rotundata]
Length = 182
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI---FIDNY 72
FEC+ICL+ KDA+++ CGH FC C+ W++ + K CP+ + ++KD + +
Sbjct: 28 FECNICLDTAKDAVISMCGHLFCWPCLHQWLETRPMKQTCPVCKAAISKDKVIPLYGRGA 87
Query: 73 TRREILENNL 82
TR+E NN+
Sbjct: 88 TRQEDPRNNV 97
>gi|324510867|gb|ADY44540.1| RING finger protein 185 [Ascaris suum]
gi|324513476|gb|ADY45537.1| RING finger protein 185 [Ascaris suum]
Length = 196
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 3 HQPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKV 61
H + K + RFEC+ICL+ +DA+++ CGH FC C+ W+D + + CP+ +
Sbjct: 20 HSDRSKKKEDEGARFECNICLDTARDAVVSMCGHLFCWPCLHQWLDTRPNRQLCPVCKSA 79
Query: 62 LTKDDIFIDNYTR 74
++KD + I Y R
Sbjct: 80 ISKDKV-IPLYGR 91
>gi|326678872|ref|XP_692341.5| PREDICTED: TNF receptor-associated factor 5, partial [Danio rerio]
Length = 490
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ +F C C + + T CGH FCA C+ ++ + G + CP+D + ++IF DN
Sbjct: 35 LEQQFICPSCGGIVLNPHQTGCGHIFCAQCVKAYTENGGSSKCPLDSIPIKPEEIFQDNC 94
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD 119
+RE+L + C +C+ + S+ + H+ C + + S D +D
Sbjct: 95 CKRELLNLEVFCTNAPECTQRFSLCNLQDHLKACPHERVRCSHSDCSD 142
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 285 IKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSSCF 344
I V + N ++ ++E + +G WK+ ++ + KE S+ FY+S
Sbjct: 370 IHVEQLQCNEQRLRQLESSSY----DGKLIWKVRDYWHR----KESGAALSSSPFYTSRS 421
Query: 345 GYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSS 394
GY+ R + + + ++SL+I +++G+ D L WPF I T L+ S
Sbjct: 422 GYKLSVRAYLGGDGSGRGSHMSLYITIMRGDFDSFLPWPFRQNITLTLLDQSG 474
>gi|118344308|ref|NP_001071977.1| zinc finger protein [Ciona intestinalis]
gi|92081468|dbj|BAE93281.1| zinc finger protein [Ciona intestinalis]
Length = 480
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 161/396 (40%), Gaps = 65/396 (16%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLTKDDIFID 70
L+P+F C C L+ + L++C H C+ C+ W K CP+D KV+ ++++ ID
Sbjct: 70 LNPKFLCVECKYTLEFPVALSNCEHHACSQCMSRLW---KISRSCPLDGKVIDRNEVTID 126
Query: 71 NYTRREILENNLTCPYKQCSSQLS--IPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNT 128
+ E+ N+ CPYK C +++SH + C E++ S FR +
Sbjct: 127 EKLQIELNNLNMVCPYKHCGCHWEGMFFDFKSHYDECLY------TEEVC-SNDCGFRCS 179
Query: 129 SGIPTNKRN---SKILTVTVF-PEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
+ N SK L V F HL + C + V C + ++ + + +
Sbjct: 180 KHLMDNHLQIECSKRLVVCEFCALHLKAENEIEHLKSCIRFPVTCPKKCGTKEIPREELN 239
Query: 185 LKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN-KEHESKLWDPNKNQ 243
HLEL C + + G T +++++ ++ + ++H S L D + Q
Sbjct: 240 A----HLEL----DCQLADKVCPYETVGCTFTCSREKMATHVDECFRKHVSLLCDGFRKQ 291
Query: 244 AGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDN 303
A E + L + + E K +++ + + D+
Sbjct: 292 A--------------------------ELLGLQNKQLFEHKQILHDHGKMITKVGREFDS 325
Query: 304 VVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRV---NISREDA 359
+L WK+ + +K E + R S FYS+ F Y+ + +
Sbjct: 326 QLL--------WKISEWSSKKIEAEAGKRTVLQSPLFYSARFQYKLAVLLLPNGDGKAKG 377
Query: 360 QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE 395
+LS+++ L +GE D +L WP+ I + ++ S +
Sbjct: 378 THLSIYVRLCKGEYDALLSWPYRLPIEISLIDQSQD 413
>gi|156356149|ref|XP_001623792.1| predicted protein [Nematostella vectensis]
gi|156210523|gb|EDO31692.1| predicted protein [Nematostella vectensis]
Length = 399
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%)
Query: 15 PRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
P C ICL + +LT CGH +C C + W + K CP+D K L + D T
Sbjct: 23 PELMCGICLMVVNKPVLTYCGHSYCNFCFNKWRNGKDVVTCPVDYKQLETNQFMADKKTE 82
Query: 75 REILENNLTCPYKQCSSQLSIPEYESHVNTC 105
R++L + C CS + + + + H+ C
Sbjct: 83 RQVLSLCVKCMNGPCSWKGELRDKKKHLTKC 113
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 10/142 (7%)
Query: 283 QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSS 342
+KI+ NN E+ E N ++ G + F ++ + K++ YS FY+S
Sbjct: 223 KKIRDNNKEIETLHEELNTANQTIRKLKGQMAKLVGTFVWRICDYKDLYEEIYSPSFYTS 282
Query: 343 CFGYRFCTRVNISR---EDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE---- 395
+GY+ + + +L L+ ++ GE D +L+WPF +I ++ S +
Sbjct: 283 KYGYKVQLKAYLHTNPFNGETHLWLYACIMVGEYDALLEWPFRRKITLYVIDQSDQRKHE 342
Query: 396 --FSITDEIQSDKNFDSFKRPV 415
D++ D+ F RP+
Sbjct: 343 TLLINPDDVLPDRK-KCFHRPI 363
>gi|260793773|ref|XP_002591885.1| hypothetical protein BRAFLDRAFT_89402 [Branchiostoma floridae]
gi|229277097|gb|EEN47896.1| hypothetical protein BRAFLDRAFT_89402 [Branchiostoma floridae]
Length = 403
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 255 SCKTCGDNSHLLKLVYER---MVLLEQSMLEQKIKVNNFELN-----LKQTEEIEDNVV- 305
SC D L + ER +V LE S+ E K N ++ E++ DNVV
Sbjct: 168 SCPNGCDAKELPRQEAERQHMVVHLEGSVAEHLEKTVNLSMHNSTRITNHAEKLIDNVVA 227
Query: 306 ----------LKLCNGV-YFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRV- 352
+ NG WK+ ++ KL + K R YS F SS +GY+ +
Sbjct: 228 VEAMKTNVGSMDKANGCQLLWKITSYNEKLADAKAGRRVSLYSPMFLSSKYGYKMAISIC 287
Query: 353 --NISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQ------- 403
+ +++SLF+ +++GE D +L WPF ++ + ++ + I+
Sbjct: 288 PNGDGQGKGKFMSLFMCIIKGEFDALLPWPFAQKVIISVIDQCQDPDARKNIEYVIKPNT 347
Query: 404 SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N RP++ +FG F ++ + RG + D+T I QV
Sbjct: 348 CKDNLQFLGRPIH--ERNPSFGTQMFCPLSHLH---RGDYIRDNTMFISVQV 394
>gi|355725872|gb|AES08691.1| TNF receptor-associated factor 5 [Mustela putorius furo]
Length = 126
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCRSVLHNPHQTGCGHRFCQHCILSLRELNAVPLCPVDKEVIRSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYE 99
+RE+L + C C++++ + Y+
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRYQ 126
>gi|196015571|ref|XP_002117642.1| hypothetical protein TRIADDRAFT_7851 [Trichoplax adhaerens]
gi|190579811|gb|EDV19900.1| hypothetical protein TRIADDRAFT_7851 [Trichoplax adhaerens]
Length = 98
Score = 59.3 bits (142), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
++EC+IC LKD + T CGH+FC CI+ +I GK +CP + + + +++ +DN +R
Sbjct: 29 KYECAICCCALKDPVQTRCGHRFCKECIEVYIRRGGK-HCPNNCQPIAINELSVDNAAKR 87
Query: 76 EILENNLTC 84
E+L ++ C
Sbjct: 88 EVLNLDIYC 96
>gi|198415526|ref|XP_002121104.1| PREDICTED: similar to tumor necrosis factor receptor-associated
factor 3 [Ciona intestinalis]
Length = 239
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
+G WK+ +F + +E YS FY+S +GY+ C RV ++ + ++SLF
Sbjct: 86 SGSLIWKIRDFSRRKREAVSGRALSLYSQPFYTSRYGYKMCARVYLNGDGMGKGTHMSLF 145
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVN 416
+++GE D +L WPF ++ L+ + ++D + D SFK+P +
Sbjct: 146 FVVMKGEYDALLTWPFRQKVTLMLLDQGMDRRHLSDTFRPDPTSSSFKKPTS 197
>gi|389889249|gb|AFL03408.1| tumor necrosis factor receptor-associated factor 3 [Pinctada
fucata]
Length = 540
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRYF--YSACFYSSCFGYRFCTRVNISRED---AQYLSL 364
+G WK+ ++ ++ K+ R YS FY+S GY+ C RV ++ + +LSL
Sbjct: 379 DGTLIWKIKDY-SRRKQDAITGRTLSLYSQPFYTSRTGYKMCARVYLNGDGMGRGTHLSL 437
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKA 423
F +++GE D +L WPF ++ L+ + ++D + D + SF++P A
Sbjct: 438 FFVIMRGEYDTLLSWPFKQKVTLMLLDQDTGTRHLSDTFRPDPSSSSFRKPTTEM--NVA 495
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFV 450
G F+ A VL+ R ++ ED F+
Sbjct: 496 SGCPLFVSHA-VLE-TRTYVREDTIFI 520
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKV---LTKDDIFIDNYTRR 75
C IC + L+DA+ T CGH+ C CID + + CP E+ L +++I D+ RR
Sbjct: 2 CKICNDVLRDAVQTFCGHRICLQCIDQALQGRESIPCPAKEEGCVDLKREEINRDSSARR 61
Query: 76 EILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLK 108
E+ ++ CP++ C L + ++H TC +
Sbjct: 62 EVRALDVFCPFEDGGCKKTLQWKDLQTHEETCEFR 96
>gi|67623397|ref|XP_667981.1| STRIN protein [Cryptosporidium hominis TU502]
gi|54659154|gb|EAL37745.1| STRIN protein [Cryptosporidium hominis]
Length = 333
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 77/186 (41%), Gaps = 41/186 (22%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI------DE 59
V+ + + + +F C ICL D SC H FC +C V+G + CPI +E
Sbjct: 26 VSKDFIEIPEQFMCPICLGAFVDPCTLSCSHSFCISC------VRGSHECPICRSLLKEE 79
Query: 60 KVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDIT 118
L+K D +D R + E C C +++SI E SH + C Y K ED
Sbjct: 80 LWLSKSDQLVDQSILRSMNETKTKC---HCGAEISISEANSHASKCSYCK------ED-- 128
Query: 119 DSPTS-----------SFRN------TSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFP 161
DSPTS SF N +S P+N R + T F L + S N
Sbjct: 129 DSPTSESKLIASLSKQSFVNNDLHAQSSNGPSNTRTTSDTTGPTFVCPLCLMNSKIPNSS 188
Query: 162 CKFYQV 167
C Y V
Sbjct: 189 CLKYNV 194
>gi|195472683|ref|XP_002088629.1| GE11492 [Drosophila yakuba]
gi|194174730|gb|EDW88341.1| GE11492 [Drosophila yakuba]
Length = 332
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 12 NLDPRFECSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIF-I 69
++D C IC + L++ + ++ C H FC ACID W+ K CP+D VL + +
Sbjct: 11 HVDEELICPICTDVLEEPVQSAECEHAFCRACIDKWM--LQKQICPVDRSVLLSSHLVPV 68
Query: 70 DNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R + + C + Q C+ LS+ E+ +HV C
Sbjct: 69 SRLMRNMLARLKIKCTFSQSGCAQMLSLEEFRTHVAAC 106
>gi|426248601|ref|XP_004018051.1| PREDICTED: LOW QUALITY PROTEIN: TNF receptor-associated factor 3
[Ovis aries]
Length = 576
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPF----VGRIRFTALNTSSEFSITDEIQSDK-----NFDSFKRPVN 416
+++GE D +L WPF R+ A + S T N SFK+P
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTRRVSRQACWSRSXAGTTRRRAXHAPTPAPNSSSFKKPTG 534
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ G ++DDT IK V
Sbjct: 535 EM--NIASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 568
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC C+ + + C ++V+ KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCSPKQTECGHRFCETCMGALLSSSSPK-CTACQEVIIKDKVFKDNC 105
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIFCRNEGRGCAEQLALGHLLVHLKNDC 141
>gi|260786588|ref|XP_002588339.1| hypothetical protein BRAFLDRAFT_281382 [Branchiostoma floridae]
gi|229273500|gb|EEN44350.1| hypothetical protein BRAFLDRAFT_281382 [Branchiostoma floridae]
Length = 651
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+D C ICL+ L + + T CGH FCA CI ++ K K CPID LT D +
Sbjct: 31 VDEELTCQICLQPLVNPLDTKCGHTFCARCIRGFL--KMKKMCPIDRLALTIRDCRTASI 88
Query: 73 TRREILENNLT-CP-YKQCSSQLSIPE----------YESHVNTCYLKYSQPSVEDITDS 120
+++L+ + CP ++CS + + Y+SH+ +C +YS ++ D + S
Sbjct: 89 MVQKLLDKLVVYCPNNEKCSETMQRSDLEAHLIHRIVYKSHIRSCIRRYSS-TILDNSVS 147
Query: 121 PTSSFRNTSGIPT 133
+S G PT
Sbjct: 148 NRASIVYKEGAPT 160
>gi|119578229|gb|EAW57825.1| hCG39509 [Homo sapiens]
Length = 284
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP EC +C + L++ + T CGH FCA+C+ W V+ + CP+ + L +++
Sbjct: 12 VDPALECKLCGQVLEEPLCTPCGHVFCASCLLPWA-VR-RRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R I + + C Y+ C + + E E+HV C
Sbjct: 70 LRSLIQKLRVQCDYRARGCGHSVRLHELEAHVEHC 104
>gi|307212058|gb|EFN87941.1| TNF receptor-associated factor 4 [Harpegnathos saltator]
Length = 512
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ +K+ E K + S FY+S +GY+ + + + ++S++
Sbjct: 355 TGTLIWKITDYASKMSEAKAKEGMELISPPFYTSQYGYKLQASIFLNGNGTGEGSHISIY 414
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP + +
Sbjct: 415 IKILPGEYDALLRWPFSHSVSFTMFDQTVVAEKACNIVESFIPDPTWKNFQRP-SREPDS 473
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F V+ + R F+ +DDT I+ +V
Sbjct: 474 LGFGFPRF--VSHEMVKKRHFV-KDDTMFIRVKV 504
>gi|380030109|ref|XP_003698700.1| PREDICTED: TNF receptor-associated factor 4-like [Apis florea]
Length = 457
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ AK+ E K + S FY+S +GY+ V + + ++S++
Sbjct: 300 TGTLIWKITDYSAKMSEAKAKEGMELVSPPFYTSQYGYKLQASVFLNGNGTGEGSHISIY 359
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP +
Sbjct: 360 IKILPGEYDALLRWPFSHSVSFTIFDQTVVAEKACNIVESFIPDPTWKNFQRPSR-EPDS 418
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F V+ + R F+ +D+T I+ +V
Sbjct: 419 LGFGFPRF--VSHEMVKKRHFV-KDNTMFIRVKV 449
>gi|48095402|ref|XP_392288.1| PREDICTED: TNF receptor-associated factor 4-like [Apis mellifera]
gi|383859065|ref|XP_003705018.1| PREDICTED: TNF receptor-associated factor 4-like [Megachile
rotundata]
Length = 457
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ AK+ E K + S FY+S +GY+ V + + ++S++
Sbjct: 300 TGTLIWKITDYSAKMSEAKAKEGMELVSPPFYTSQYGYKLQASVFLNGNGTGEGSHISIY 359
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP +
Sbjct: 360 IKILPGEYDALLRWPFSHSVSFTIFDQTVVAEKACNIVESFIPDPTWKNFQRPSR-EPDS 418
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F V+ + R F+ +D+T I+ +V
Sbjct: 419 LGFGFPRF--VSHEMVKKRHFV-KDNTMFIRVKV 449
>gi|156404207|ref|XP_001640299.1| predicted protein [Nematostella vectensis]
gi|156227432|gb|EDO48236.1| predicted protein [Nematostella vectensis]
Length = 299
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 13 LDP---RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI-F 68
LDP F+C IC L+D ++T+CGH FC+ C+ WI G CP+ + L DD+
Sbjct: 9 LDPVEDDFKCGICFGVLEDPLVTTCGHVFCSQCLVHWIAENGT--CPLTCEQLAIDDLKK 66
Query: 69 IDNYTRREILENNLTCPYKQ-CSSQLSIPEYESHVNTCYLK---YSQPSVEDITDSPTSS 124
I TR L N C +++ C + L I ++H C S + D +DSP S
Sbjct: 67 IPPLTRLISLLNIRCCNFQRGCPAILRIESIQTHQRKCQYAEGLTSGGKIMDNSDSPELS 126
Query: 125 FR 126
+
Sbjct: 127 VQ 128
>gi|332206532|ref|XP_003252347.1| PREDICTED: PDZ domain-containing RING finger protein 4 isoform 2
[Nomascus leucogenys]
Length = 1036
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP EC +C + L++ + T CGH FCA+C+ W + CP+ + L +++
Sbjct: 12 VDPALECKLCGQVLEEPLCTPCGHVFCASCLLPW--AVRRRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCY 106
R I + + C Y+ C + + E E+HV C+
Sbjct: 70 LRSLIQKLRVQCDYRARGCGHSVRLHELEAHVEHCH 105
>gi|297474638|ref|XP_002687419.1| PREDICTED: PDZ domain-containing RING finger protein 4 [Bos taurus]
gi|296487717|tpg|DAA29830.1| TPA: PDZ domain containing ring finger 4 [Bos taurus]
Length = 451
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++DP F+C +C + L++ T CGH FCA C+ W + CP+ + L +++
Sbjct: 11 SVDPDFQCRLCGQVLEEPRCTPCGHVFCARCLLPW--AARRRRCPLQCRPLAPGELYRVL 68
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQPSVEDIT--DSPTSSFR 126
R + + + C Y+ C + + E +HV C + S+ + ++ D P S R
Sbjct: 69 PLRSLVQKLRIQCDYRPRGCGRSVQLSELAAHVERCDFGPASRRHLGSVSRPDGPGSGDR 128
Query: 127 NTSG 130
+ G
Sbjct: 129 SVRG 132
>gi|260794999|ref|XP_002592494.1| hypothetical protein BRAFLDRAFT_68985 [Branchiostoma floridae]
gi|229277714|gb|EEN48505.1| hypothetical protein BRAFLDRAFT_68985 [Branchiostoma floridae]
Length = 353
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 16/190 (8%)
Query: 272 RMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EI 330
R+ LE EQ ++ + LK +E +G + WK+ K ++
Sbjct: 168 RVKALETRSAEQDAQLAQRAVRLKTLKETS-------YDGEFVWKISGMAQKRRDATVGK 220
Query: 331 NRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRF 387
S CF++S GY+ +V + R + ++S+F +++GE D IL WPF ++ F
Sbjct: 221 TTVIDSVCFFTSRAGYKMRAQVYLNGYGRGEGTHVSVFFVMMKGEYDAILSWPFRQKVTF 280
Query: 388 TALNTSSEFSITDEIQSDK--NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
T L+ + +TD + SF RP + G +F+ + + + G ++
Sbjct: 281 TLLDQDHQADVTDWFHAGAYPTSPSFARPTGD--SNLPCGTPDFVPLERLYNSGHAYV-R 337
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 338 DDTMFLKITV 347
>gi|25144031|ref|NP_491534.2| Protein Y110A7A.2 [Caenorhabditis elegans]
gi|351065052|emb|CCD66191.1| Protein Y110A7A.2 [Caenorhabditis elegans]
Length = 335
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 331 NRYFYSACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIR 386
+R YS FYS +GY+ V D +Y S+F+ L++GE DDIL+WPF +
Sbjct: 180 HRSIYSQPFYSHGYGYKMMA-VAAPYGDGLAFREYFSVFVCLMKGEWDDILEWPFRCDVT 238
Query: 387 FTALNTSSEFSIT-----DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRG 441
F+ L+ + +T +E+ + F +RP L FGF NF+ +A V +
Sbjct: 239 FSILSDDKKELLTKTIYVNEMPEIQEF--LERPEG--LRNGTFGFQNFLPLAKVTE---- 290
Query: 442 FLMEDDTFV 450
F + D F+
Sbjct: 291 FAADGDIFI 299
>gi|348678578|gb|EGZ18395.1| hypothetical protein PHYSODRAFT_544210 [Phytophthora sojae]
Length = 615
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 81/210 (38%), Gaps = 33/210 (15%)
Query: 17 FECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
EC+IC E +A T CG FC CI+ W+ +G CP+ + + + + +R
Sbjct: 243 LECAICQEVFTNATEATCCGQIFCKECIERWVSERGS--CPMCREAIGFSLLAASRHAQR 300
Query: 76 EILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIPTNK 135
E + CPY CS + HV+ C +P P I T +
Sbjct: 301 MANEMKVNCPY--CSETMKKAGLADHVSACDQAPVEPP------PPADVALRQLLIRTAR 352
Query: 136 RNS----KILTVTVFPEHLNMQ-------GSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
NS + LT P+ L MQ G + E + + C V + Q YD
Sbjct: 353 MNSTFLARFLTAPSPPQALMMQCYIRTRGGGNYELYTQDTDTLLCTAVRRRQ------YD 406
Query: 185 LKTSFHLELLFNKYCS-----DGSQSTNTP 209
+ SF + L N S DG+ NTP
Sbjct: 407 MSVSFIISLATNLDASNQADEDGAIPINTP 436
>gi|156407926|ref|XP_001641608.1| predicted protein [Nematostella vectensis]
gi|156228747|gb|EDO49545.1| predicted protein [Nematostella vectensis]
Length = 411
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 298 EEIEDNVVLKLC-NGVYFWKMYNFPAKLKEMKEINR--YFYSACFYSSCFGYRFCTRVNI 354
++I +N LC NG++ WK+ N+ + + +S FY+S +GY+ + +
Sbjct: 239 QKIRENESRSLCTNGIFLWKISNYKHQYDQAVASPEELAIFSPPFYTSQYGYKLRLKAYL 298
Query: 355 SRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDS 410
+ D +LSL+I +++G+ D +L+WPF +I F ++ S + T + +++ +
Sbjct: 299 NGRDRGKGTHLSLYIIIMKGDYDALLEWPFKQKITFYLIDQSEKQNHRTHLLSPNRSLPN 358
Query: 411 FKRPVNFFLNKKAFGFNNFIRVA-DVLDPGRGFLMEDDTFVIKTQV 455
K N K+ G N V +VL+ G ++DD IK V
Sbjct: 359 IKVVFNRPTVKENLGIGNPCFVPNEVLESGE--YVKDDVMFIKAVV 402
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDIFID 70
L +EC IC +D I + CGH+FC +C+ ++G CP+D + ++ +F+D
Sbjct: 20 LPEEYECPICQLAFRDPIQIEECGHRFCQSCLQELRRLQGSPVLCPMDRRPISSTKVFVD 79
Query: 71 NYTRREILENNLTC--PYKQCSSQLSIPEYESHVNTC 105
RR IL + C ++C + E H C
Sbjct: 80 KAARRAILGLGVKCWNWKRKCEWTGELSNIEEHAKNC 116
>gi|294879434|ref|XP_002768680.1| hypothetical protein Pmar_PMAR027527 [Perkinsus marinus ATCC 50983]
gi|239871420|gb|EER01398.1| hypothetical protein Pmar_PMAR027527 [Perkinsus marinus ATCC 50983]
Length = 927
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 9 NKLNLDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
+K ++ P CS+C E D + T CGH FC C+ W+ +K CP +TK +
Sbjct: 30 DKDSISPNLHCSVCCEVFTDPVCATPCGHTFCRECLYQWLGLK-NTTCPECRGRITKQNC 88
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
D R+ + E ++ CP++ C + E+H+ C
Sbjct: 89 HNDLMARKFLDEQDVYCPFRGCQWDGKHGDLEAHMGDC 126
>gi|340711247|ref|XP_003394190.1| PREDICTED: TNF receptor-associated factor 4-like isoform 1 [Bombus
terrestris]
Length = 457
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ AK+ E K + S FY+S +GY+ V + + ++S++
Sbjct: 300 TGTLIWKITDYSAKMSEAKAKEGMELVSPPFYTSQYGYKLQASVFLNGNGTGEGSHISIY 359
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP +
Sbjct: 360 IKILPGEYDALLRWPFSHSVSFTIFDQTVVAEKACNIVESFIPDPTWKNFQRPSR-EPDS 418
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F+ V + ++D+T I+ +V
Sbjct: 419 LGFGFPRFLSHEMV---KKRHFVKDNTMFIRVKV 449
>gi|350411759|ref|XP_003489444.1| PREDICTED: TNF receptor-associated factor 4-like isoform 1 [Bombus
impatiens]
Length = 457
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ AK+ E K + S FY+S +GY+ V + + ++S++
Sbjct: 300 TGTLIWKITDYSAKMSEAKAKEGMELVSPPFYTSQYGYKLQASVFLNGNGTGEGSHISIY 359
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP +
Sbjct: 360 IKILPGEYDALLRWPFSHSVSFTIFDQTVVAEKACNIVESFIPDPTWKNFQRPSR-EPDS 418
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F+ V + ++D+T I+ +V
Sbjct: 419 LGFGFPRFLSHEMV---KKRHFVKDNTMFIRVKV 449
>gi|307207349|gb|EFN85099.1| RING finger protein 185 [Harpegnathos saltator]
Length = 182
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI---FI 69
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + ++KD + +
Sbjct: 25 DRMFECNICLDTAKDAVVSMCGHLFCWPCLHQWLETRPTRQVCPVCKAAISKDKVIPLYG 84
Query: 70 DNYTRREILENNLTCPYKQCSSQLSIPE 97
T+ E NN+ + + Q S PE
Sbjct: 85 RGATKHEDPRNNVP---PRPAGQRSEPE 109
>gi|340711249|ref|XP_003394191.1| PREDICTED: TNF receptor-associated factor 4-like isoform 2 [Bombus
terrestris]
Length = 409
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ AK+ E K + S FY+S +GY+ V + + ++S++
Sbjct: 252 TGTLIWKITDYSAKMSEAKAKEGMELVSPPFYTSQYGYKLQASVFLNGNGTGEGSHISIY 311
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP +
Sbjct: 312 IKILPGEYDALLRWPFSHSVSFTIFDQTVVAEKACNIVESFIPDPTWKNFQRPSR-EPDS 370
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F+ V + ++D+T I+ +V
Sbjct: 371 LGFGFPRFLSHEMV---KKRHFVKDNTMFIRVKV 401
>gi|402885646|ref|XP_003906260.1| PREDICTED: PDZ domain-containing RING finger protein 4 [Papio
anubis]
Length = 1035
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP EC +C + L++ + T CGH FCA+C+ W + CP+ + L +++
Sbjct: 12 VDPALECKLCGQVLEEPLCTPCGHVFCASCLLPW--AVQRRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R I + + C Y+ C + + E E+HV C
Sbjct: 70 LRSLIQKLRVQCDYRARGCGHSVRLQELEAHVEHC 104
>gi|350411762|ref|XP_003489445.1| PREDICTED: TNF receptor-associated factor 4-like isoform 2 [Bombus
impatiens]
Length = 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ AK+ E K + S FY+S +GY+ V + + ++S++
Sbjct: 252 TGTLIWKITDYSAKMSEAKAKEGMELVSPPFYTSQYGYKLQASVFLNGNGTGEGSHISIY 311
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP +
Sbjct: 312 IKILPGEYDALLRWPFSHSVSFTIFDQTVVAEKACNIVESFIPDPTWKNFQRPSR-EPDS 370
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
FGF F+ V + ++D+T I+ +V
Sbjct: 371 LGFGFPRFLSHEMV---KKRHFVKDNTMFIRVKV 401
>gi|324513820|gb|ADY45660.1| TNF receptor-associated factor 1 [Ascaris suum]
Length = 255
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 255 SCKTCGD----NSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLK------QTEEIEDNV 304
C+ GD +H+ + + LL +L+ KI + N EL+L+ + + +
Sbjct: 31 GCQYKGDRETLQAHIREEPIRHLALLCDGVLDLKILLANMELSLETMVHNMELLQRKTTT 90
Query: 305 VLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNI---SREDAQ 360
+ KL W++ N K E + R +S F ++ +GY+ +++ + +
Sbjct: 91 IEKLYGAQIIWRIDNVKQKQNEARSGTRTTVFSPPFATARYGYKMVVSISLYGDGQVRGE 150
Query: 361 YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQ 403
Y+S F+ +++GE D +L+WPF ++ T ++ + + ++I+
Sbjct: 151 YMSAFVSIMRGEYDALLEWPFTHKVVITLMDQNPDLDARNDIE 193
>gi|156359797|ref|XP_001624951.1| predicted protein [Nematostella vectensis]
gi|156211759|gb|EDO32851.1| predicted protein [Nematostella vectensis]
Length = 460
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 31/191 (16%)
Query: 285 IKVNNFELNLKQTEEIEDNVVL------------KLCNGVYFWKMYNFPAKLKEMKEINR 332
+ + N EL ++ +E++ ++ L K+ + W++ ++ K+KE K N
Sbjct: 264 LALKNKELIMRFSEKLSEHGTLIEKHEKRLNDLEKIAHSQLIWRIEDYTRKMKEAKAGNT 323
Query: 333 -YFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFT 388
+S F +S GYR C V + + ++S+FI +++G D +L WPF R+ F
Sbjct: 324 DTLFSPTFTTSKHGYRLCASVCLNGDGKGKGTHMSVFISVLKGAFDALLKWPFDYRVTFV 383
Query: 389 ALNTSSE--------FSITDEIQSDKNFDSFKRPVNFFLNKKA-FGFNNFIRVADVLDPG 439
L+ + + FSI +D N RP L K A FG F + +++
Sbjct: 384 LLDQNDDPAQRKHIRFSIKPNPCAD-NEPFLGRPR---LEKNASFGGAKFAKHEEIVS-- 437
Query: 440 RGFLMEDDTFV 450
R ++ ED F+
Sbjct: 438 RNYIKEDTIFL 448
>gi|109096171|ref|XP_001089369.1| PREDICTED: PDZ domain-containing RING finger protein 4 isoform 1
[Macaca mulatta]
Length = 1035
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP EC +C + L++ + T CGH FCA+C+ W + CP+ + L +++
Sbjct: 12 VDPALECKLCGQVLEEPLCTPCGHVFCASCLLPW--AVRRRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R I + + C Y+ C + + E E+HV C
Sbjct: 70 LRSLIQKLRVQCDYRARGCGHSVRLQELEAHVEHC 104
>gi|24584167|ref|NP_609668.2| CG9014 [Drosophila melanogaster]
gi|7298084|gb|AAF53323.1| CG9014 [Drosophila melanogaster]
gi|27819878|gb|AAO24987.1| LP07794p [Drosophila melanogaster]
gi|220950198|gb|ACL87642.1| CG9014-PA [synthetic construct]
Length = 328
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 12 NLDPRFECSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEK-VLTKDDIFI 69
++D C IC + L++ + +S C H FC ACID W+ K CP+D +LT + +
Sbjct: 11 HVDEELICPICTDVLEEPVQSSECEHAFCRACIDKWM--IQKQICPVDRSGLLTSHLVPV 68
Query: 70 DNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R + + C + Q C+ L++ E+ +HV C
Sbjct: 69 SRLMRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVAAC 106
>gi|395841529|ref|XP_003793587.1| PREDICTED: PDZ domain-containing RING finger protein 4 isoform 3
[Otolemur garnettii]
Length = 1036
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++P +C +C + L++ + T CGH FCA C+ W CP+ + L +++
Sbjct: 12 VEPALQCQLCGQVLQEPLCTPCGHVFCAGCLLPW--AARLRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVE 115
R + + + C ++ C + + E +HV C ++P +E
Sbjct: 70 LRSLVQKLRVQCDHRGCGRTVRLHELAAHVERCDFGPARPRLE 112
>gi|324521659|gb|ADY47902.1| TNF receptor-associated factor 1, partial [Ascaris suum]
Length = 186
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 255 SCKTCGD----NSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLK------QTEEIEDNV 304
C+ GD +H+ + + LL +L+ KI + N EL+L+ + + +
Sbjct: 21 GCQYKGDRETLQAHIREEPIRHLALLCDGVLDLKILLANMELSLETMVHNMELLQRKTTT 80
Query: 305 VLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNI---SREDAQ 360
+ KL W++ N K E + R +S F ++ +GY+ +++ + +
Sbjct: 81 IEKLYGAQIIWRIDNVKQKQNEARSGTRTTVFSPPFATARYGYKMVVSISLYGDGQVRGE 140
Query: 361 YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQ 403
Y+S F+ +++GE D +L+WPF ++ T ++ + + ++I+
Sbjct: 141 YMSAFVSIMRGEYDALLEWPFTHKVVITLMDQNPDLDARNDIE 183
>gi|449281587|gb|EMC88634.1| RING finger protein 185 [Columba livia]
Length = 194
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKD 65
A + N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D
Sbjct: 29 AGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 88
Query: 66 DIFIDNYTR 74
+ I Y R
Sbjct: 89 KV-IPLYGR 96
>gi|307170553|gb|EFN62761.1| TNF receptor-associated factor 4 [Camponotus floridanus]
Length = 388
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLF 365
G WK+ ++ K+ E K + S FY+S +GY+ + + + ++S++
Sbjct: 231 TGTLIWKITDYATKMSEAKAKEGMELVSPPFYTSQYGYKLQASIFLNGNGTGEGSHISIY 290
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDKNFDSFKRPVNFFLNK 421
I ++ GE D +L WPF + FT + + +I + D + +F+RP +
Sbjct: 291 IKILPGEYDALLRWPFSHSVSFTMFDQTVIAEKACNIVESFIPDPTWKNFQRPSR-EPDS 349
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
FGF F V+ + R F+ ED F+
Sbjct: 350 LGFGFPRF--VSHEMVKKRHFVKEDIMFI 376
>gi|17554742|ref|NP_497830.1| Protein RNF-5 [Caenorhabditis elegans]
gi|2501735|sp|Q09463.1|RNF5_CAEEL RecName: Full=RING finger protein 5
gi|3874385|emb|CAA86745.1| Protein RNF-5 [Caenorhabditis elegans]
Length = 235
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 4 QPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVL 62
+P +++ + RFEC+ICL+ KDA+++ CGH FC C+ W+D + N CP+ + +
Sbjct: 11 EPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAI 70
Query: 63 TKDDIFIDNYTR 74
+ + + Y R
Sbjct: 71 DGNKV-VPIYGR 81
>gi|196007532|ref|XP_002113632.1| hypothetical protein TRIADDRAFT_26989 [Trichoplax adhaerens]
gi|190584036|gb|EDV24106.1| hypothetical protein TRIADDRAFT_26989 [Trichoplax adhaerens]
Length = 417
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKV-NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPA 322
H K ++LL+ + Q+ KV E+ Q ++I + + K + Y W++ F
Sbjct: 214 HFRKDAINHLILLKSLLDRQRDKVAQQHEIIADQCKKIME--LKKSMDTSYVWRINKFSQ 271
Query: 323 KLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDIL 377
KL + + S FYS GY+ C + + + + ++S+F+HL++GE D +L
Sbjct: 272 KLDNARHSKSHSILISDPFYSHRHGYKLCALMYPNGDGNGKSTHVSIFVHLLKGEYDGVL 331
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQ-------SDKNFDSFKRPVNFFLNKKAFGFNNFI 430
WP+ + F ++ S S + I + N F RP N +FG + F+
Sbjct: 332 SWPYEYKTTFELVDQSDNVSDRENISYSIIPEYTAANAKFFSRPEND--ANLSFGSSTFV 389
Query: 431 RVADVLDPGRGFLMEDDTFVIK 452
VL R ++DDTF +K
Sbjct: 390 S-HKVLQDRR--YIKDDTFYVK 408
>gi|449689302|ref|XP_004211993.1| PREDICTED: TNF receptor-associated factor 3-like [Hydra
magnipapillata]
Length = 232
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 36/162 (22%)
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNF--------------ELNLKQTE----EIEDNV--- 304
L L +++ LLE ++ + + K+NN E ++K TE E+E ++
Sbjct: 15 LSLAVDKVNLLEITVSQHEEKINNLKNLFDSIISSGEFVERSVKSTEKRVSELEKDIFNI 74
Query: 305 ------VLKLCNGVYFWKMYNFPAKL----KEMKEINRYFYSACFYSSCFGYRFCTRVNI 354
L N + W + N +++ K KE + S+ FYS+ FGY+ ++ +
Sbjct: 75 ENKCLSTLVPSNNAFIWSIDNIASRISKDHKSSKE--QDICSSPFYSAPFGYKLFLQIYL 132
Query: 355 ---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTS 393
+ +SLF+H+++GE D++LDWPF I+ + L+ S
Sbjct: 133 NGYGEYRGKSISLFLHIMKGEYDNLLDWPFTKTIKMSLLDQS 174
>gi|281485930|gb|ADA70526.1| TNF receptor-associated factor 6 [Sceloporus graciosus]
Length = 169
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNI----SREDAQYLSLFIHLVQGE 372
FY+ GY+ C R++I + A Y+SLF+H++QGE
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRRANYISLFVHIMQGE 169
>gi|209154244|gb|ACI33354.1| RING finger protein 185 [Salmo salar]
Length = 181
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTK 64
A + N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++
Sbjct: 23 AAGDGGNQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISR 82
Query: 65 DDIFIDNYTR 74
D + I Y R
Sbjct: 83 DKV-IPLYGR 91
>gi|398391488|ref|XP_003849204.1| hypothetical protein MYCGRDRAFT_96081 [Zymoseptoria tritici IPO323]
gi|339469080|gb|EGP84180.1| hypothetical protein MYCGRDRAFT_96081 [Zymoseptoria tritici IPO323]
Length = 354
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 18 ECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREI 77
+C+IC + +D ++ +CGH FC ACID W D +G N CP+D +VL K + +R++
Sbjct: 146 DCTICKDGCQDPVILACGHIFCRACIDRWFD-QGNNTCPLDFRVLFKKGLQGKKAVKRKM 204
>gi|21912604|emb|CAD21557.1| putative ubiquitin ligase [Taenia solium]
Length = 187
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDV-KGKNYCPIDEKVLTKDDIFID 70
N + FEC+ICL+ +DA+++ CGH FC C+ W++V K + CP+ + +++D + I
Sbjct: 46 NTNGNFECNICLDQAQDAVVSRCGHLFCWPCLHQWLEVKKSRPVCPVCKAAVSRDSV-IP 104
Query: 71 NYTR 74
Y R
Sbjct: 105 LYGR 108
>gi|83595295|gb|ABC25099.1| transcription regulator [Glossina morsitans morsitans]
gi|289739513|gb|ADD18504.1| putative E3 ubiquitin ligase [Glossina morsitans morsitans]
Length = 262
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI--- 67
N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + + KD +
Sbjct: 103 NDDSLFECNICLDTAKDAVVSMCGHLFCWPCLHQWLETRPNRKLCPVCKAAIGKDKVIPL 162
Query: 68 FIDNYTRREILENNL 82
+ N T++E N +
Sbjct: 163 YGRNSTKQEDPRNKV 177
>gi|56119056|ref|NP_001007841.1| E3 ubiquitin-protein ligase RNF185 [Gallus gallus]
gi|326929873|ref|XP_003211078.1| PREDICTED: RING finger protein 185-like [Meleagris gallopavo]
gi|82197755|sp|Q5ZIR9.1|RN185_CHICK RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|53134896|emb|CAG32374.1| hypothetical protein RCJMB04_23p11 [Gallus gallus]
Length = 194
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKD 65
A + N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D
Sbjct: 29 AGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 88
Query: 66 DIFIDNYTR 74
+ I Y R
Sbjct: 89 KV-IPLYGR 96
>gi|257196172|ref|NP_001158067.1| PDZ domain-containing RING finger protein 4 isoform 1 [Homo
sapiens]
gi|116242741|sp|Q6ZMN7.3|PZRN4_HUMAN RecName: Full=PDZ domain-containing RING finger protein 4; AltName:
Full=Ligand of Numb protein X 4; AltName:
Full=SEMACAP3-like protein
Length = 1036
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP EC +C + L++ + T CGH FCA+C+ W + CP+ + L +++
Sbjct: 12 VDPALECKLCGQVLEEPLCTPCGHVFCASCLLPW--AVRRRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R I + + C Y+ C + + E E+HV C
Sbjct: 70 LRSLIQKLRVQCDYRARGCGHSVRLHELEAHVEHC 104
>gi|449671604|ref|XP_004207529.1| PREDICTED: TNF receptor-associated factor 4-like [Hydra
magnipapillata]
Length = 531
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 315 WKMYNFPAKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQ 370
W++ F K+KE K N +S F++S GYR C + + + ++S+F+ +++
Sbjct: 376 WRIEEFSRKMKEAKSGNVTTLFSPPFHTSKHGYRMCASLCLNGDGKGKGTHISVFVSILK 435
Query: 371 GENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFL---------NK 421
G D +L WPF RI+F L+ + E +S K F+ P L
Sbjct: 436 GAFDSLLKWPFDYRIKFYLLDQNPVI----EKRSHKKFNIKPNPCQENLPFLGCPKMEKN 491
Query: 422 KAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+FG F + +D+ D + L++DD +K
Sbjct: 492 ASFGAAKFCKQSDLED--QPTLVKDDVIYLK 520
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 19 CSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREI 77
C C E ++ + + C H+ C+AC + + + CP+D+ + ++ F+D I
Sbjct: 122 CPQCNEAMRYPVQFSECKHRVCSACFHEFFRTEPR--CPVDQGKINREKAFLDKTLTETI 179
Query: 78 LENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
++ + C +++ C + + E +SH C
Sbjct: 180 MKLEILCNFEEWGCKWEGTFGEGQSHFEKC 209
>gi|225706568|gb|ACO09130.1| RING finger protein 185 [Osmerus mordax]
Length = 191
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTK 64
A N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++
Sbjct: 25 TAGEGGNQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISR 84
Query: 65 DDIFIDNYTR 74
D + I Y R
Sbjct: 85 DKV-IPLYGR 93
>gi|444727373|gb|ELW67871.1| TNF receptor-associated factor 4 [Tupaia chinensis]
Length = 249
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 309 CNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI----SREDAQYLS 363
C+GV WK+ ++ +L+E K + N +S FY+ +GY+ + S ED +LS
Sbjct: 133 CDGVLIWKIGSYGRRLQEAKAKPNLKCFSPAFYTHKYGYKLQVSAFLNSTGSGEDT-HLS 191
Query: 364 LFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRP 414
L+I ++ G DD+ PF R+ F+ L+ S IT+ D N+ +F++P
Sbjct: 192 LYICVLPGAFDDLPARPFARRVTFSLLDQSDPGLAKPQHITETFHPDPNWKNFQKP 247
>gi|340383977|ref|XP_003390492.1| PREDICTED: TNF receptor-associated factor 3-like [Amphimedon
queenslandica]
Length = 407
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 325 KEMKEINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPF 381
+E KE + ++S FY+S GY+ RV+++ + ++S FI+L+ GE DDIL+WPF
Sbjct: 259 REKKEGDEIWFSPGFYTSPGGYKMSLRVDVNGDRDGKGTHVSCFIYLMAGEYDDILEWPF 318
Query: 382 VGRIRFTALN 391
G + LN
Sbjct: 319 QGEVTIELLN 328
>gi|390337627|ref|XP_001186180.2| PREDICTED: ligand of Numb protein X 2-like [Strongylocentrotus
purpuratus]
Length = 628
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+D C+ICL+ L + + T CGH FC C+ S +++ +CPID + LT+ D +
Sbjct: 39 VDEELTCNICLQPLVNPMDTMCGHTFCMRCLRSVLNL--HKFCPIDRRPLTQQDCRASSL 96
Query: 73 TRREILENNLT-CPYKQ-CSSQLSIPEYESHVN 103
R +L+ + CP C+S+L E E H+
Sbjct: 97 IVRRMLDRLIVLCPNTDFCTSKLPRSELEPHLQ 129
>gi|281485926|gb|ADA70524.1| TNF receptor-associated factor 6 [Sceloporus formosus]
Length = 169
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGE 372
FY+ GY+ C R++I + A Y+SLF+H++QGE
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGE 169
>gi|83265414|gb|ABB97507.1| BSK65-MONO2 [Homo sapiens]
Length = 110
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI 67
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D +
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV 88
>gi|196011032|ref|XP_002115380.1| hypothetical protein TRIADDRAFT_50677 [Trichoplax adhaerens]
gi|190582151|gb|EDV22225.1| hypothetical protein TRIADDRAFT_50677 [Trichoplax adhaerens]
Length = 186
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDIFIDNYTR 74
FEC+ICL+ KDA+++ CGH FC C+ +W++ + N CP+ + +++D + I Y R
Sbjct: 35 FECNICLDTAKDAVVSFCGHLFCWPCLHTWLETRPNNKVCPVCKAAISRDKV-IPLYGR 92
>gi|350596494|ref|XP_003361275.2| PREDICTED: TNF receptor-associated factor 1-like, partial [Sus
scrofa]
Length = 271
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 29/233 (12%)
Query: 167 VGCREVFK-SQALLEKHYDLKTSFHLELLFNKY----CSDGSQSTNTPSHGRQDTSNQKE 221
VGC FK S +++H + HL LL GS S + P Q+ S+ +
Sbjct: 47 VGCS--FKGSPKFIQEHEVTSQATHLNLLLGFMKQWKAQLGSVSGSGPMALEQNLSDL-Q 103
Query: 222 IEAYLMKNK---EHESKLWDPNKNQAGDDKSSEGDCSCKTCG------DNSHLLKLVYER 272
++ MK K E E KL A +K E D H+ L ++
Sbjct: 104 LQGAFMKEKLLTELEGKLCVFENIVAVLNKEVEASNLALAASIHQSQLDREHIQSL-EQK 162
Query: 273 MVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EIN 331
++ L+Q++ ++ + E +L+ EE +G + WK+ N + E
Sbjct: 163 VIELQQTLAQKDQALGKLEQSLRLLEEAS-------FDGTFLWKITNVTRRCHESACGRT 215
Query: 332 RYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
+S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF
Sbjct: 216 VSLFSPAFYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMRGEYDALLPWPF 268
>gi|281485938|gb|ADA70530.1| TNF receptor-associated factor 6 [Sceloporus magister]
Length = 169
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGE 372
FY+ GY+ C R++I + A Y+SLF+H++QGE
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGE 169
>gi|355753869|gb|EHH57834.1| Cysteine-rich domain associated with RING and Traf domains protein
1, partial [Macaca fascicularis]
Length = 424
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ GY+ ++ + + LSL+
Sbjct: 261 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTQKCGYKLQVSAFLNDKGSGEGTRLSLY 320
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNFFL- 419
I L+ G D++L+W F + F L+ S +T+ D N+ +F++P +
Sbjct: 321 IDLLPGAFDNLLEWSFARCVTFCLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 380
Query: 420 ---NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ FG+ FI D+ R ++ +D F+
Sbjct: 381 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 412
>gi|268575100|ref|XP_002642529.1| C. briggsae CBR-RNF-5 protein [Caenorhabditis briggsae]
Length = 241
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 2 EHQPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEK 60
E P ++NK + RFEC+ICL+ +DA+++ CGH FC C+ W+D + N CP+ +
Sbjct: 11 EEPPGSSNK-DESARFECNICLDAARDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKS 69
Query: 61 VLTKDDIFIDNYTR 74
+ + + Y R
Sbjct: 70 AIDGTKV-VPIYGR 82
>gi|340380220|ref|XP_003388621.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 516
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYF 334
+EQ + EQ+ +++L + E + NG + W++ + + ++ E
Sbjct: 330 IEQKLAEQERTSGMLKVHLSELELQLQASLASTYNGSFLWRIPDVKRRKRDAIEGKITSI 389
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQY---LSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS FY+ GY+ C R ++ + Y LS+F L++GE D +L WPF ++ ++
Sbjct: 390 YSPPFYTGRNGYKMCIRAYLNGDGIGYNTHLSIFFVLMKGEYDPLLKWPFDYKVSLIMVD 449
Query: 392 TSSEFSITDEIQSDKNFDSFKRP 414
+ I + + SF+RP
Sbjct: 450 QDHKRHIVQTFKPSPSSSSFQRP 472
>gi|348532807|ref|XP_003453897.1| PREDICTED: RING finger protein 185-like [Oreochromis niloticus]
Length = 188
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFID 70
N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I
Sbjct: 28 NQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IP 86
Query: 71 NYTR 74
Y R
Sbjct: 87 IYGR 90
>gi|332024039|gb|EGI64257.1| RING finger protein 185 [Acromyrmex echinatior]
Length = 184
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + ++KD + I Y R
Sbjct: 30 FECNICLDTAKDAVVSMCGHLFCWPCLHQWLETRPTRQVCPVCKAAISKDKV-IPLYGR 87
>gi|157113649|ref|XP_001652037.1| rnf5 [Aedes aegypti]
gi|108877619|gb|EAT41844.1| AAEL006550-PA [Aedes aegypti]
Length = 238
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 5 PVANNKLNL-------------DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG 51
P +K+NL D FEC+ICL+ KDA+++ CGH FC CI W++
Sbjct: 62 PTGKSKINLEDATEDGGEEKKDDSVFECNICLDTAKDAVVSMCGHLFCWPCIHQWMNGY- 120
Query: 52 KNYCPIDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPE 97
+N CP+ + ++K+ + I Y R E+ + + Q + PE
Sbjct: 121 RNTCPVCKSSISKEKV-IPLYGRGGSKEDPRKTVPPRPAGQRTEPE 165
>gi|149641026|ref|XP_001505788.1| PREDICTED: RING finger protein 185-like isoform 1
[Ornithorhynchus anatinus]
Length = 192
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFID 70
N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I
Sbjct: 32 NQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IP 90
Query: 71 NYTR 74
Y R
Sbjct: 91 LYGR 94
>gi|281485932|gb|ADA70527.1| TNF receptor-associated factor 6 [Sceloporus grammicus]
Length = 169
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIDHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQGE 372
FY+ GY+ C R++I + A Y+SLF+H++QGE
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQGE 169
>gi|357626892|gb|EHJ76795.1| hypothetical protein KGM_22278 [Danaus plexippus]
Length = 501
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 302 DNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSSCFGYRFCTRVN---ISRED 358
DN L NG W++ NF A++KE KE + S F +S +GY +N I +
Sbjct: 329 DNPELGGDNGHLIWRIDNFQARMKEAKEKDSVLTSPLFRTSKYGYTLKAELNLNGIGKWK 388
Query: 359 AQYLSLFIHLVQGENDDILDWP 380
++L+ + LV G D +LDWP
Sbjct: 389 GRHLTCTLRLVAGPYDQLLDWP 410
>gi|410904121|ref|XP_003965541.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Takifugu
rubripes]
Length = 193
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFID 70
N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I
Sbjct: 33 NQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IP 91
Query: 71 NYTR 74
Y R
Sbjct: 92 LYGR 95
>gi|170027947|ref|XP_001841858.1| RING finger protein 185 [Culex quinquefasciatus]
gi|167868328|gb|EDS31711.1| RING finger protein 185 [Culex quinquefasciatus]
Length = 246
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
FEC+ICL+ KDA+++ CGH FC CI W++ +N CP+ + ++K+ + I Y R
Sbjct: 95 FECNICLDTAKDAVVSMCGHLFCWPCIHQWMNGY-RNTCPVCKSSISKEKV-IPLYGRGG 152
Query: 77 ILENNLTCPYKQCSSQLSIPE 97
E+ + + Q + PE
Sbjct: 153 SKEDPRKTAPPRPAGQRTEPE 173
>gi|158295219|ref|XP_316088.3| AGAP006041-PA [Anopheles gambiae str. PEST]
gi|157015930|gb|EAA10978.3| AGAP006041-PA [Anopheles gambiae str. PEST]
Length = 282
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYT 73
D FEC+ICL+ KDA+++ CGH FC CI W++ +N CP+ + ++K+ + I Y
Sbjct: 126 DSMFECNICLDTAKDAVVSMCGHLFCWPCIHQWMNGY-RNTCPVCKSSISKEKV-IPLYG 183
Query: 74 RREILENNLTCPYKQCSSQLSIPE 97
R E+ + + Q + PE
Sbjct: 184 RGGSKEDPRKTVPPRPAGQRTEPE 207
>gi|334327453|ref|XP_001378580.2| PREDICTED: RING finger protein 185-like [Monodelphis domestica]
Length = 192
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFID 70
N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I
Sbjct: 32 NQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IP 90
Query: 71 NYTR 74
Y R
Sbjct: 91 LYGR 94
>gi|119580348|gb|EAW59944.1| ring finger protein 185, isoform CRA_b [Homo sapiens]
Length = 128
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI 67
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D +
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV 88
>gi|348527966|ref|XP_003451490.1| PREDICTED: tripartite motif-containing protein 16-like
[Oreochromis niloticus]
Length = 550
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 6 VANNKLNLDP-RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTK 64
+A + LD + CSICL+ LKD + CGH +C +CI ++ D K + CP K T
Sbjct: 1 MAQQTIQLDQEKLSCSICLDLLKDPVTIPCGHSYCMSCIKTYWDEKETHSCPQCRKTYTV 60
Query: 65 DDIFIDNYTRREILEN 80
+ + N E++E+
Sbjct: 61 RPVLVKNSIFAELVED 76
>gi|195351375|ref|XP_002042210.1| GM25378 [Drosophila sechellia]
gi|195579036|ref|XP_002079368.1| GD22050 [Drosophila simulans]
gi|194124034|gb|EDW46077.1| GM25378 [Drosophila sechellia]
gi|194191377|gb|EDX04953.1| GD22050 [Drosophila simulans]
Length = 332
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 12 NLDPRFECSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFID 70
++D C IC + L++ + +S C H FC ACID W+ K CP+D L +
Sbjct: 11 HVDEELICPICTDVLEEPVQSSECEHAFCRACIDKWM--IQKQICPVDRSGLLNSHLVPV 68
Query: 71 NYTRREILEN-NLTCPYKQ--CSSQLSIPEYESHVNTC 105
+ R +L + C + Q CS L++ E+ +HV C
Sbjct: 69 SRLMRNMLSRLKIKCIFSQSGCSQMLALEEFRTHVAAC 106
>gi|449671572|ref|XP_002161248.2| PREDICTED: TNF receptor-associated factor 3-like [Hydra
magnipapillata]
Length = 336
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 39/286 (13%)
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSH--GRQDTSNQ 219
CKF ++GC+ ++ ++ H D+ + HL+ + S+ + + D S
Sbjct: 53 CKFSKIGCK-FTGNRFEVDLHMDIASEKHLDYVLKSIQEIKSEYIKKENKVIAKHD-SKL 110
Query: 220 KEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE---RMVLL 276
K ++ Y+ K L + N+ + E + NS L+ + +++ L
Sbjct: 111 KVLQEYICKQNNAIKDLHETNRQLETSARDFEVQLTS-ISASNSKLIDEMNRLKIQLITL 169
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKL-KEMKEINRYFY 335
++ +LE K ++N G WK+ + +K+ N Y
Sbjct: 170 QEELLEHK------DINF---------------TGCLMWKITEVSVHITNAVKKQNLSIY 208
Query: 336 SACFYSSCFGYRFCTRV---NISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT 392
S FY+S +GY+ ++ + QY S++ HL+ ++D+IL WPF +I F+ L+
Sbjct: 209 SKPFYTSRYGYKIRAQLFLNGLGCNTGQYASIYFHLLPTDHDNILSWPFRHKISFSLLDQ 268
Query: 393 SSEFS--ITDEIQSDKNFDSFKRP-VNFFLNKKAFGFNNFIRVADV 435
S + + I+ + + FK+P VN K GFN F + ++
Sbjct: 269 SGDKTKNISYALCPSVDDKQFKQPSVNMSEGK---GFNKFFSIEEL 311
>gi|350579583|ref|XP_003353681.2| PREDICTED: TNF receptor-associated factor 1-like [Sus scrofa]
Length = 388
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 339 FYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE 395
FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L+ ++
Sbjct: 268 FYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNR 327
Query: 396 FSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
D + D SF+RP + A G F + + P ++ +D F+
Sbjct: 328 EHAIDAFRPDLTSASFQRPQS--ETNVASGCPLFFPLNKLQSPKHAYVKDDTMFL 380
>gi|308474556|ref|XP_003099499.1| CRE-RNF-5 protein [Caenorhabditis remanei]
gi|308266688|gb|EFP10641.1| CRE-RNF-5 protein [Caenorhabditis remanei]
Length = 278
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDIFIDNYTR 74
RFEC+ICL+ KDA+++ CGH FC C+ W+D + N CP+ + + + + Y R
Sbjct: 66 RFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGSKV-VPIYGR 124
>gi|323509455|dbj|BAJ77620.1| cgd7_100 [Cryptosporidium parvum]
gi|323510269|dbj|BAJ78028.1| cgd7_100 [Cryptosporidium parvum]
Length = 333
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 24/125 (19%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI------DE 59
V+ + + + +F C ICL D SC H FC +C V+G + CPI +E
Sbjct: 26 VSKDFIEIPEQFMCPICLGAFVDPCTLSCSHSFCISC------VRGSHECPICRSLLKEE 79
Query: 60 KVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDIT 118
L+K D +D R + E C C +++SI E SH + C Y K ED
Sbjct: 80 LWLSKSDQLVDQSILRSMNETKTKC---HCGAEISISEANSHASKCSYCK------ED-- 128
Query: 119 DSPTS 123
DSPTS
Sbjct: 129 DSPTS 133
>gi|327291840|ref|XP_003230628.1| PREDICTED: TNF receptor-associated factor 1-like, partial [Anolis
carolinensis]
Length = 179
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 260 GDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYN 319
G + +++ + +M L++ ++++ + E L+ +EEI +G + W++ +
Sbjct: 58 GLDQDMIRGLELKMADLQRCLVQKDAALCKLEERLRSSEEIS-------YDGSFLWRITD 110
Query: 320 FPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDD 375
K E R F S FY+S +G++ C R+ + R + SLF+ L++GE D
Sbjct: 111 VHRKCYEAVCGKMRSFQSPAFYTSRYGHKLCMRIYLNGDGRSKGSHASLFLVLLRGEYDA 170
Query: 376 ILDWPFV 382
+L WPF
Sbjct: 171 LLQWPFA 177
>gi|37650544|emb|CAE51070.1| TNF receptor associated factor 5 [Sus scrofa]
Length = 264
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 32 TSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREILENNLTCP-YKQCS 90
T CGH+FC CI S ++ CP+D++V+ ++F DN +RE+L + C C+
Sbjct: 7 TGCGHRFCQDCILSLRELNAVPLCPVDKEVIKSQEVFKDNCCKREVLNLYVFCKNAPGCT 66
Query: 91 SQLSIPEYESHVNTCYLKYSQ 111
+++ + Y+ H+ C + Q
Sbjct: 67 AKIILGRYQDHLQQCLFQAVQ 87
>gi|66362480|ref|XP_628206.1| ring domain-containing protein [Cryptosporidium parvum Iowa II]
gi|46229845|gb|EAK90663.1| ring domain-containing protein [Cryptosporidium parvum Iowa II]
Length = 344
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 24/125 (19%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI------DE 59
V+ + + + +F C ICL D SC H FC +C V+G + CPI +E
Sbjct: 37 VSKDFIEIPEQFMCPICLGAFVDPCTLSCSHSFCISC------VRGSHECPICRSLLKEE 90
Query: 60 KVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDIT 118
L+K D +D R + E C C +++SI E SH + C Y K ED
Sbjct: 91 LWLSKSDQLVDQSILRSMNETKTKC---HCGAEISISEANSHASKCSYCK------ED-- 139
Query: 119 DSPTS 123
DSPTS
Sbjct: 140 DSPTS 144
>gi|156542753|ref|XP_001600631.1| PREDICTED: RING finger protein 185-like [Nasonia vitripennis]
Length = 184
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI---FI 69
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + ++K+ + +
Sbjct: 25 DRMFECNICLDTAKDAVVSMCGHLFCWPCLHQWLETRPTRQVCPVCKAAISKEKVIPLYG 84
Query: 70 DNYTRREILENNL 82
T++E NN+
Sbjct: 85 RGATKQEDPRNNV 97
>gi|329664666|ref|NP_001192421.1| PDZ domain-containing RING finger protein 4 [Bos taurus]
Length = 1037
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++DP F+C +C + L++ T CGH FCA C+ W + CP+ + L +++
Sbjct: 11 SVDPDFQCRLCGQVLEEPRCTPCGHVFCARCLLPW--AARRRRCPLQCRPLAPGELYRVL 68
Query: 72 YTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQPSVEDIT--DSPTSSFR 126
R + + + C Y+ C + + E +HV C + S+ + ++ D P S R
Sbjct: 69 PLRSLVQKLRIQCDYRPRGCGRSVQLSELAAHVERCDFGPASRRHLGSVSRPDGPGSGDR 128
Query: 127 NTSG 130
+ G
Sbjct: 129 SVRG 132
>gi|402591537|gb|EJW85466.1| ring finger protein 5 [Wuchereria bancrofti]
Length = 176
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDV-KGKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C+ICL+ +DA+++ CGH FC C+ W+D + CP+ + ++KD + I Y R
Sbjct: 29 RFDCNICLDVARDAVVSMCGHLFCWPCLHQWLDTCPNRQLCPVCKSAISKDKV-IPLYGR 87
Query: 75 -REILENNLTCPYKQCSSQLSIPEYESH 101
+ P + + +P+ SH
Sbjct: 88 GGNDTDPRDKVPPRPRGQRTEMPQASSH 115
>gi|358333261|dbj|GAA51807.1| TNF receptor-associated factor 4 [Clonorchis sinensis]
Length = 546
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 264 HLLKLVYERMVLLEQSMLEQKI----KVNNF-ELNLKQTEEIEDNVVLKLCNGVYF-WKM 317
HL + E + ++ SM + + + +F EL T++ + L+ C G F WK+
Sbjct: 335 HLTECHIEHLSMVNSSMQQMTLLLEAQTKSFTELKSMLTQQAKRLTALERCFGSSFTWKI 394
Query: 318 YNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGEN 373
N+ K K + +S FY+ GYR V + +++S+F+ L +GE+
Sbjct: 395 DNYAEKFSMAKSGKQTTLFSPPFYTHRCGYRMAVSVCLYGSGDCRGKFMSVFVCLCRGEH 454
Query: 374 DDILDWPFVGRIRFTALNTSSEFSITDEIQ 403
D +L WPF ++ FT L+ + ++ ++
Sbjct: 455 DTVLLWPFTHQLTFTLLDQHPDVTMRKPVE 484
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 93/231 (40%), Gaps = 49/231 (21%)
Query: 5 PVANNKLNLDPRFE---CSICLEYLKDAIL-TSCGHKFCAACIDSWIDVKGKNYCPIDEK 60
P+ + L +DP E C C L+ IL CGH+ C++C+ + + +G + CP D
Sbjct: 122 PLGSEILFVDPLDEVHKCISCGNALRVPILFEDCGHRCCSSCLPNVL--RGSSKCPADNT 179
Query: 61 VLTKDDIFIDNYTRREILENNLTCPYKQ--CSSQLSIPEYESHV-----------NTCYL 107
L +D I +D + ++ E + C ++ C+ + + H+ N C +
Sbjct: 180 HLKQDHIKLDKDFQLQMDELAVRCTFEAGGCTWTGKLAQLGGHLSQCGYRVITCPNDCGV 239
Query: 108 KYSQPSVED--ITDSPTSS----FRNTSGIPTNKRNSKILTVTVFP-------------- 147
++ Q VE +D P S F + S I N+ I FP
Sbjct: 240 EFEQRYVETHVSSDCPKRSKKCKFCDASLIAANELK-HIGVCPRFPVTCPNDCKKRDIPR 298
Query: 148 ----EHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELL 194
EHL + S ++ PC F GC E + E H T H+E L
Sbjct: 299 CQLAEHLATE-CSKQDLPCPFEPHGC-EFLGRKKKTEVHL---TECHIEHL 344
>gi|194765731|ref|XP_001964980.1| GF21698 [Drosophila ananassae]
gi|190617590|gb|EDV33114.1| GF21698 [Drosophila ananassae]
Length = 332
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 12 NLDPRFECSICLEYLKDAILTSCG--HKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFI 69
++D C IC + L+D + SCG H +C ACID W+ + K CP+D L +
Sbjct: 11 HVDEELICPICADILEDPV-QSCGCEHAYCRACIDKWM--QQKQICPVDRSDLLPGHLVP 67
Query: 70 DNYTRREILEN-NLTCPYKQ--CSSQLSIPEYESHVNTC 105
+ R +L + C + + CS L++ EY SHV C
Sbjct: 68 VSRLMRNMLSRLKIKCSFAENGCSQLLALEEYRSHVAGC 106
>gi|48095378|ref|XP_392285.1| PREDICTED: RING finger protein 185-like isoform 2 [Apis
mellifera]
gi|328780209|ref|XP_003249767.1| PREDICTED: RING finger protein 185-like isoform 1 [Apis
mellifera]
gi|380030255|ref|XP_003698767.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like isoform 1
[Apis florea]
gi|380030257|ref|XP_003698768.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like isoform 2
[Apis florea]
Length = 182
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI---FIDNY 72
FEC+ICL+ K+A+++ CGH FC C+ W++ + + CP+ + ++KD + +
Sbjct: 28 FECNICLDTAKNAVISMCGHLFCWPCLHQWLETRPTRQMCPVCKAAISKDKVIPLYGRGD 87
Query: 73 TRREILENNL 82
TR E NN+
Sbjct: 88 TRHEDPRNNV 97
>gi|405953910|gb|EKC21478.1| TNF receptor-associated factor 4 [Crassostrea gigas]
Length = 292
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 13 LDPRFECSICLEYLKDAIL-TSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD-DIFID 70
LD +EC +C E L +L CGH+ CA C+ + +G CPID+ V+ +D D+ D
Sbjct: 42 LDKAYECPVCCEVLNHPVLFEKCGHRCCANCLGEVM--RGGGKCPIDQTVIDRDRDVMPD 99
Query: 71 NYTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
N ++EI L C + + CS ++ + ++H++ C
Sbjct: 100 NVFQQEIDLLQLKCSFVDRGCSWYGTMKDIKAHLDDC 136
>gi|241828030|ref|XP_002416664.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
gi|215511128|gb|EEC20581.1| E3 ubiquitin ligase, putative [Ixodes scapularis]
Length = 184
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKD 65
N + D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D
Sbjct: 20 GNTGPSQDGNFECNICLDTAKDAVVSLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 79
Query: 66 DIFIDNYTR 74
+ I Y R
Sbjct: 80 KV-IPLYGR 87
>gi|312380753|gb|EFR26663.1| hypothetical protein AND_07113 [Anopheles darlingi]
Length = 286
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYT 73
D FEC+ICL+ KDA+++ CGH FC CI W++ +N CP+ + ++K+ + I Y
Sbjct: 131 DTVFECNICLDTAKDAVVSMCGHLFCWPCIHQWMNGY-RNTCPVCKSSISKEKV-IPLYG 188
Query: 74 RREILENNLTCPYKQCSSQLSIPE 97
R E+ + + Q + PE
Sbjct: 189 RGGSKEDPRKTVPPRPAGQRTEPE 212
>gi|148236917|ref|NP_001089432.1| tripartite motif containing 62 [Xenopus laevis]
gi|63101478|gb|AAH94484.1| Trim62 protein [Xenopus laevis]
Length = 633
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 1 MEHQPVANNKLNLDP------RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY 54
+E Q N+L L P CS+C E K+ +L CGH FC +CI++ + +G
Sbjct: 147 VERQESVKNELPLAPDEDLAEELTCSLCHELFKEPVLVECGHNFCKSCIENAWEARGSAS 206
Query: 55 CPIDEKVLTKDDIFIDNYTRREILENNLTC 84
CP E+ + FI N T ++++ +L+C
Sbjct: 207 CPECEEPFAERS-FIINRTLEKLVKKSLSC 235
>gi|395862272|ref|XP_003803385.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Otolemur
garnettii]
Length = 192
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKD 65
A D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D
Sbjct: 27 AGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 86
Query: 66 DIFIDNYTR 74
+ I Y R
Sbjct: 87 KV-IPLYGR 94
>gi|402884035|ref|XP_003905499.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Papio anubis]
gi|355563596|gb|EHH20158.1| hypothetical protein EGK_02953 [Macaca mulatta]
gi|355784916|gb|EHH65767.1| hypothetical protein EGM_02600 [Macaca fascicularis]
gi|380788253|gb|AFE66002.1| E3 ubiquitin-protein ligase RNF185 isoform 1 [Macaca mulatta]
Length = 192
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKD 65
A D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D
Sbjct: 27 AGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 86
Query: 66 DIFIDNYTR 74
+ I Y R
Sbjct: 87 KV-IPLYGR 94
>gi|341889703|gb|EGT45638.1| hypothetical protein CAEBREN_31835 [Caenorhabditis brenneri]
Length = 239
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 3 HQPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKV 61
+P ++ RFEC+ICL+ KDA+++ CGH FC C+ W+D + N CP+ +
Sbjct: 10 QEPTSSANKEESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSA 69
Query: 62 LTKDDI 67
+ +
Sbjct: 70 IDGSKV 75
>gi|426372200|ref|XP_004053016.1| PREDICTED: PDZ domain-containing RING finger protein 4 isoform 2
[Gorilla gorilla gorilla]
Length = 1036
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP +C +C + L++ + T CGH FCA+C+ W + CP+ + L +++
Sbjct: 12 VDPALKCKLCGQVLEEPLCTPCGHVFCASCLLPW--AVRRRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSG 130
R I + + C Y+ C + + E E+HV C P R+ G
Sbjct: 70 LRSLIQKLRVQCDYRARGCGHSVRLHELEAHVEHCDF------------GPARRLRSRRG 117
Query: 131 IPT 133
P+
Sbjct: 118 CPS 120
>gi|383412555|gb|AFH29491.1| RING finger protein 185 isoform 1 [Macaca mulatta]
Length = 192
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKD 65
A D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D
Sbjct: 27 AGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 86
Query: 66 DIFIDNYTR 74
+ I Y R
Sbjct: 87 KV-IPLYGR 94
>gi|294884839|gb|ADF47430.1| TNF receptor-associated factor-2-like protein B [Dugesia japonica]
Length = 444
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV+ WK+ F E + NR S FY+ FGY+ ++ + + +LS+F
Sbjct: 304 NGVFIWKIERFSELKSEAERGNRISITSDYFYTKEFGYKMSMKIYPAGDGVGKGTHLSVF 363
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVN 416
L++GE DD+L WPF ++ T L+ ++ + +D + D +++P +
Sbjct: 364 FTLMRGEFDDLLQWPFKNKVTLTILDQKNKTNDHSDTFKPDVRSTCYQQPTD 415
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
N+ +C IC + L +A+ T CG ++C C+ + KGK C D +I DN
Sbjct: 23 NISDNLKCIICSQLLLEALQTDCGCRYCKECLKEY-QAKGKTKCLTD-GCGDLGNIIPDN 80
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
REI + + C + C + + H+++C
Sbjct: 81 AVNREIGKLTVKCLFPGCEHSELLKDIGDHLDSC 114
>gi|198435866|ref|XP_002123301.1| PREDICTED: similar to Meprin A subunit alpha precursor
(Endopeptidase-2) (MEP-1) (Endopeptidase-24.18 subunit
alpha) (E-24.18) [Ciona intestinalis]
Length = 687
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 300 IEDNVVL-KLCNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSSCFGYRFCTR---VNIS 355
I+D VL K C YF + N +++ YFYS Y+ GY F + V S
Sbjct: 438 IDDVSVLDKPCEMTYF--VVNDYSQILATSARGDYFYSPLMYTDD-GYGFQVKIYPVGSS 494
Query: 356 REDAQYLSLFIHLVQGENDDILDWPFVGR-IRFTALNTS----SEFSITDEIQSDKNFDS 410
Y++++ ++ QG NDD L WP R I+F+ ++ + + + I S + S
Sbjct: 495 NSKDGYMAMYYYVAQGVNDDSLQWPMYNRYIKFSIVDQGPDALTRMTQANSILSSSSGGS 554
Query: 411 FKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
+ +P + +GF++F+ V+D+ + R FL + D ++ QVT+MT
Sbjct: 555 WDKPTS--TRNSGYGFSSFMSVSDIQNT-RHFL-KHDQLMVSMQVTDMT 599
>gi|301778241|ref|XP_002924538.1| PREDICTED: PDZ domain-containing RING finger protein 4-like
[Ailuropoda melanoleuca]
Length = 988
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP F+C +C + L++ + T CGH FC +C+ W V + CP+ + L ++
Sbjct: 12 VDPDFKCKLCCQVLEEPLCTPCGHVFCTSCLLPW--VVRRRRCPLQCQPLAPGKLYRVPP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQ 111
R I + + C Y+ C + + E +HV C + ++
Sbjct: 70 LRSLIQKLRIQCDYRARGCGRSVRLHELAAHVERCSFRPAR 110
>gi|81916260|sp|Q91YT2.1|RN185_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|15928691|gb|AAH14812.1| Rnf185 protein [Mus musculus]
gi|26342665|dbj|BAC34989.1| unnamed protein product [Mus musculus]
gi|26343409|dbj|BAC35361.1| unnamed protein product [Mus musculus]
gi|26344570|dbj|BAC35934.1| unnamed protein product [Mus musculus]
gi|26346534|dbj|BAC36918.1| unnamed protein product [Mus musculus]
gi|74139095|dbj|BAE38444.1| unnamed protein product [Mus musculus]
gi|74195444|dbj|BAE39541.1| unnamed protein product [Mus musculus]
gi|74203994|dbj|BAE29001.1| unnamed protein product [Mus musculus]
gi|74223162|dbj|BAE40718.1| unnamed protein product [Mus musculus]
gi|148708469|gb|EDL40416.1| ring finger protein 185, isoform CRA_a [Mus musculus]
Length = 192
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|403308957|ref|XP_003945237.1| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing
protein 39 [Saimiri boliviensis boliviensis]
Length = 367
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +N+ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERNFPCPV 68
>gi|194860471|ref|XP_001969591.1| GG10187 [Drosophila erecta]
gi|190661458|gb|EDV58650.1| GG10187 [Drosophila erecta]
Length = 332
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 12 NLDPRFECSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFID 70
++D C IC + L++ + +S C H +C ACID W+ K CP+D L +
Sbjct: 11 HVDEELICPICTDVLEEPVQSSQCEHAYCRACIDKWM--LQKQICPVDRSALLASHLVPV 68
Query: 71 NYTRREILEN-NLTCPYKQ--CSSQLSIPEYESHVNTC 105
+ R +L + C + Q C+ L++ E+ +HV C
Sbjct: 69 SRLMRNMLGRLKMKCTFSQSGCTQMLALEEFRTHVAAC 106
>gi|405960320|gb|EKC26251.1| hypothetical protein CGI_10024104 [Crassostrea gigas]
Length = 1362
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + ++KD + I Y R
Sbjct: 27 FECNICLDTAKDAVVSMCGHLFCWPCLHQWLETRPNRQTCPVCKAGISKDKV-IPIYGR 84
>gi|393909066|gb|EFO21580.2| hypothetical protein LOAG_06910 [Loa loa]
Length = 189
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C+ICL+ +DA+++ CGH FC C+ W+D + + CP+ + ++++ + I Y R
Sbjct: 26 RFDCNICLDVARDAVVSMCGHLFCWPCLHQWLDTRPNRQLCPVCKSAISREKV-IPLYGR 84
>gi|242012650|ref|XP_002427042.1| RING finger protein, putative [Pediculus humanus corporis]
gi|212511290|gb|EEB14304.1| RING finger protein, putative [Pediculus humanus corporis]
Length = 178
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + K CP+ + ++K+ + I Y
Sbjct: 20 DKTFECNICLDTAKDAVVSLCGHLFCWPCLHQWLETRPNKQMCPVCKAAISKEKV-IPLY 78
Query: 73 TR 74
R
Sbjct: 79 GR 80
>gi|321454594|gb|EFX65759.1| hypothetical protein DAPPUDRAFT_65278 [Daphnia pulex]
Length = 188
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y R
Sbjct: 35 FECNICLDTAKDAVISMCGHLFCWPCLHQWLETRPNRQSCPVCKAAISRDKV-IPLYGR 92
>gi|209732308|gb|ACI67023.1| RING finger protein 185 [Salmo salar]
Length = 192
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTK 64
A N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++
Sbjct: 26 TAGEGGNQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISR 85
Query: 65 DDIFIDNYTR 74
+ + I Y R
Sbjct: 86 EKV-IPLYGR 94
>gi|390342591|ref|XP_003725692.1| PREDICTED: uncharacterized protein LOC100893998 [Strongylocentrotus
purpuratus]
Length = 365
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYT 73
+P C IC L+DA+LT CGH FC C+D+W+ CP ++K +
Sbjct: 13 NPNLICGICACVLRDAVLTRCGHAFCHTCLDTWLARPLAGTCPQCRTCISKFQVSPVWAI 72
Query: 74 RREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
R I ++ C + C+ L + E H+++C
Sbjct: 73 REMINVLSIYCSNADRGCTLTLGVENLEKHLDSC 106
>gi|426394182|ref|XP_004063380.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Gorilla gorilla
gorilla]
gi|441619068|ref|XP_004088552.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Nomascus
leucogenys]
gi|83265422|gb|ABB97511.1| BSK65-TEST2 [Homo sapiens]
Length = 157
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|350538121|ref|NP_001232319.1| uncharacterized protein LOC100190044 [Taeniopygia guttata]
gi|197127274|gb|ACH43772.1| putative RIKEN cDNA 1700022N24 [Taeniopygia guttata]
gi|197127275|gb|ACH43773.1| putative RIKEN cDNA 1700022N24 [Taeniopygia guttata]
gi|197127276|gb|ACH43774.1| putative RIKEN cDNA 1700022N24 [Taeniopygia guttata]
Length = 194
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFID 70
N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I
Sbjct: 34 NQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IP 92
Query: 71 NYTR 74
Y R
Sbjct: 93 LYGR 96
>gi|40019235|emb|CAE88928.1| TNF-receptor-associated factor 1 [Hydractinia echinata]
Length = 409
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSW-IDVKGKNYCPIDEKVLTKDDIFID 70
L P +EC IC +D + + CGH+FC +C++ KG CP+D + + + +F+D
Sbjct: 22 LPPEYECPICQLAFRDPVQVEECGHRFCQSCLNEIKRRSKGILTCPLDRQQVDAEKVFLD 81
Query: 71 NYTRREILENNLTC--PYKQCSSQLSIPEYESHVNTC 105
RR +L + C ++C + E H+ +C
Sbjct: 82 KAARRAVLGLVIKCENAKRKCEWTGELSSVEDHLKSC 118
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINR--YFYSACFYSSCFGYRFCTRVNISRED---AQYLSL 364
NG + W + F + + + + +S FY+S +GY+ + ++ D +LSL
Sbjct: 254 NGYFIWPIKRFRQQFELARNSDEEIAVFSQPFYTSQYGYKLRIKAYLNGRDRGKGTHLSL 313
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKA 423
++ +++GE D +L+WPF +I F L+ + ++ +++ + + N ++
Sbjct: 314 YLIIMKGEFDALLEWPFNQKITFYLLDQGEDRKHKIHQLSPNRSLPNVRAVFNKPAAEEN 373
Query: 424 FGFNNFIRVA-DVLDPGRGFLMEDDTFVIKTQV 455
G N V+ + +D G +++DT +K +V
Sbjct: 374 LGIGNPSFVSHEAIDAGE--FVKEDTIFMKCEV 404
>gi|410055812|ref|XP_003953920.1| PREDICTED: uncharacterized protein LOC458768 [Pan troglodytes]
Length = 157
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|312080184|ref|XP_003142492.1| hypothetical protein LOAG_06910 [Loa loa]
Length = 186
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C+ICL+ +DA+++ CGH FC C+ W+D + + CP+ + ++++ + I Y R
Sbjct: 26 RFDCNICLDVARDAVVSMCGHLFCWPCLHQWLDTRPNRQLCPVCKSAISREKV-IPLYGR 84
>gi|149720261|ref|XP_001497369.1| PREDICTED: RING finger protein 185-like isoform 1 [Equus
caballus]
Length = 192
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|296191693|ref|XP_002743736.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Callithrix
jacchus]
Length = 192
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|66730362|ref|NP_001019442.1| E3 ubiquitin-protein ligase RNF185 [Rattus norvegicus]
gi|81888056|sp|Q568Y3.1|RN185_RAT RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|62203106|gb|AAH92655.1| Ring finger protein 185 [Rattus norvegicus]
gi|149047504|gb|EDM00174.1| similar to 1700022N24Rik protein, isoform CRA_a [Rattus
norvegicus]
Length = 192
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|395517385|ref|XP_003762857.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 isoform 1
[Sarcophilus harrisii]
Length = 192
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|417408544|gb|JAA50818.1| Putative ring finger protein 185, partial [Desmodus rotundus]
Length = 195
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 37 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 95
Query: 73 TR 74
R
Sbjct: 96 GR 97
>gi|156392064|ref|XP_001635869.1| predicted protein [Nematostella vectensis]
gi|156222967|gb|EDO43806.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 55.1 bits (131), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKN-----YCPIDEKVLTKDD 66
+DP C IC E L+ A+LT CGH FC C+++W++ K G+N CP L + D
Sbjct: 12 VDPNLLCGICAEVLERAVLTPCGHSFCGVCLETWMNAKLGENEKCPASCPSCRADLYQGD 71
Query: 67 IFIDNYTRREILENNLT-CPYKQ--CSSQLSIPEYESHVNTC 105
I R I++ + CP C L + E H+ +C
Sbjct: 72 T-IPVLALRGIVDGLIVHCPNADNGCKLVLKLEGVEGHLKSC 112
>gi|291395934|ref|XP_002714394.1| PREDICTED: tripartite motif-containing 39 [Oryctolagus cuniculus]
Length = 488
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLKD ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKDPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|115814147|ref|XP_789029.2| PREDICTED: TNF receptor-associated factor 6-like
[Strongylocentrotus purpuratus]
Length = 529
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL-TKDDIFIDN 71
LD ++ C +CL L+D + T CGH+FC C+ CP+D+ + ++F D
Sbjct: 106 LDKKYVCPVCLSALRDPLQTKCGHRFCKVCLTLASGPGNVAKCPLDKLFFDVRSEVFEDV 165
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+RE+L + C C + + E H + C
Sbjct: 166 AMKREVLSLLVLCTNLDCEWKGELRLLEEHTDDC 199
>gi|351703838|gb|EHB06757.1| RING finger protein 185 [Heterocephalus glaber]
Length = 192
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|344294799|ref|XP_003419103.1| PREDICTED: RING finger protein 185-like isoform 1 [Loxodonta
africana]
Length = 192
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|348585181|ref|XP_003478350.1| PREDICTED: RING finger protein 185-like [Cavia porcellus]
Length = 192
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|47223648|emb|CAF99257.1| unnamed protein product [Tetraodon nigroviridis]
Length = 191
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLT 63
P + + D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + ++
Sbjct: 24 PATADSSSQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGIS 83
Query: 64 KDDIFIDNYTR 74
++ + I Y R
Sbjct: 84 REKV-IPLYGR 93
>gi|387018150|gb|AFJ51193.1| RING finger protein 185 [Crotalus adamanteus]
Length = 191
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 33 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 91
Query: 73 TR 74
R
Sbjct: 92 GR 93
>gi|403295055|ref|XP_003938470.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Saimiri
boliviensis boliviensis]
Length = 192
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|348543584|ref|XP_003459263.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oreochromis
niloticus]
Length = 677
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 6 VANNKLNLDP-RFECSICLEYLKDAILTSCGHKFCAACIDSWIDV---KGKNYCP----- 56
+A L LD RF CSICL+ L + + TSCGH FC +CI S D KG CP
Sbjct: 1 MAERGLQLDQERFSCSICLDLLNEPVTTSCGHSFCKSCIRSHWDAEDQKGTYTCPQCRQA 60
Query: 57 -IDEKVLTKDDIFID 70
+ VL K+ + D
Sbjct: 61 FVSRPVLGKNTMLAD 75
>gi|348527902|ref|XP_003451458.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oreochromis
niloticus]
Length = 412
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 6 VANNKLNLD-PRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTK 64
+A + LD + CSICL+ LKD + CGH +C CI ++ D K + CP ++ T
Sbjct: 1 MAQQTIQLDQEKLSCSICLQLLKDPVTIPCGHSYCMDCIKNYWDEKETHSCPQCRQIFTP 60
Query: 65 DDIFIDNYTRREILEN 80
+ + N E++E+
Sbjct: 61 RPVLVKNTMLAELVED 76
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 26 LKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREILEN 80
LKD + CGH +C CI D K + CP ++ T + + N E++E+
Sbjct: 249 LKDPVTIPCGHNYCMDCIRKCWDEKEVHSCPQCRQIFTPRPVLVKNGMLAELVED 303
>gi|427786955|gb|JAA58929.1| Putative e3 ubiquitin ligase [Rhipicephalus pulchellus]
Length = 185
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 28 DGSFECNICLDTAKDAVVSLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 86
Query: 73 TR 74
R
Sbjct: 87 GR 88
>gi|281485934|gb|ADA70528.1| TNF receptor-associated factor 6 [Sceloporus jalapae]
Length = 168
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQG 371
FY+ GY+ C R++I + A Y+SLF+H++QG
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQG 168
>gi|31542783|ref|NP_689480.2| E3 ubiquitin-protein ligase RNF185 isoform 1 [Homo sapiens]
gi|55661012|ref|XP_515084.1| PREDICTED: uncharacterized protein LOC458768 isoform 8 [Pan
troglodytes]
gi|73995053|ref|XP_852634.1| PREDICTED: RING finger protein 185 isoform 2 [Canis lupus
familiaris]
gi|114685924|ref|XP_001145985.1| PREDICTED: uncharacterized protein LOC458768 isoform 3 [Pan
troglodytes]
gi|194043264|ref|XP_001925859.1| PREDICTED: RING finger protein 185 isoform 1 [Sus scrofa]
gi|301759511|ref|XP_002915600.1| PREDICTED: RING finger protein 185-like [Ailuropoda melanoleuca]
gi|332218011|ref|XP_003258153.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Nomascus
leucogenys]
gi|332218013|ref|XP_003258154.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Nomascus
leucogenys]
gi|397513340|ref|XP_003826976.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Pan paniscus]
gi|410976919|ref|XP_003994860.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Felis catus]
gi|426394180|ref|XP_004063379.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Gorilla gorilla
gorilla]
gi|426394184|ref|XP_004063381.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Gorilla gorilla
gorilla]
gi|426394186|ref|XP_004063382.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Gorilla gorilla
gorilla]
gi|441619065|ref|XP_004088551.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 [Nomascus
leucogenys]
gi|74751883|sp|Q96GF1.1|RN185_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|14550508|gb|AAH09504.1| RNF185 protein [Homo sapiens]
gi|23272798|gb|AAH35684.1| Ring finger protein 185 [Homo sapiens]
gi|45708382|gb|AAH12817.1| RNF185 protein [Homo sapiens]
gi|45708658|gb|AAH26040.1| Ring finger protein 185 [Homo sapiens]
gi|45708732|gb|AAH33166.1| Ring finger protein 185 [Homo sapiens]
gi|47678229|emb|CAG30235.1| Em:AC005005.6 [Homo sapiens]
gi|83265412|gb|ABB97506.1| BSK65-MONO1 [Homo sapiens]
gi|83265416|gb|ABB97508.1| BSK65-PANC1 [Homo sapiens]
gi|83265424|gb|ABB97512.1| BSK65-TEST3 [Homo sapiens]
gi|109451258|emb|CAK54490.1| RNF185 [synthetic construct]
gi|109451836|emb|CAK54789.1| RNF185 [synthetic construct]
gi|119580351|gb|EAW59947.1| ring finger protein 185, isoform CRA_e [Homo sapiens]
gi|119580355|gb|EAW59951.1| ring finger protein 185, isoform CRA_e [Homo sapiens]
gi|158255908|dbj|BAF83925.1| unnamed protein product [Homo sapiens]
gi|184185467|gb|ACC68871.1| ring finger protein 185 (predicted) [Rhinolophus ferrumequinum]
gi|261859730|dbj|BAI46387.1| ring finger protein 185 [synthetic construct]
gi|281350120|gb|EFB25704.1| hypothetical protein PANDA_003609 [Ailuropoda melanoleuca]
gi|410213080|gb|JAA03759.1| ring finger protein 185 [Pan troglodytes]
gi|410258842|gb|JAA17388.1| ring finger protein 185 [Pan troglodytes]
gi|410302724|gb|JAA29962.1| ring finger protein 185 [Pan troglodytes]
gi|410333985|gb|JAA35939.1| ring finger protein 185 [Pan troglodytes]
gi|432105167|gb|ELK31536.1| RING finger protein 185 [Myotis davidii]
Length = 192
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|281485976|gb|ADA70549.1| TNF receptor-associated factor 6 [Uta palmeri]
Length = 168
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMQAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQG 371
FY+ GY+ C R++I + A Y+SLF+H++QG
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQG 168
>gi|195131329|ref|XP_002010103.1| GI15740 [Drosophila mojavensis]
gi|193908553|gb|EDW07420.1| GI15740 [Drosophila mojavensis]
Length = 285
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + + N
Sbjct: 131 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNS 190
Query: 73 TRREILENNLTCPYKQCSSQLSIPE 97
TR+E N + + + Q S PE
Sbjct: 191 TRQEDPRNKVP---PRPAGQRSEPE 212
>gi|125805074|ref|XP_691507.2| PREDICTED: e3 ubiquitin-protein ligase TRIM21 [Danio rerio]
Length = 582
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDIFIDNYTR 74
+F CSICL+ + + T CGH FC++CI S+ + +GK +CP+ ++ K N+T
Sbjct: 12 QFTCSICLDIFTNPVSTPCGHSFCSSCISSYWEGQGKTCFCPLCKESFRKRPELHVNHTL 71
Query: 75 REILEN 80
+EI E
Sbjct: 72 KEITEQ 77
>gi|432885964|ref|XP_004074838.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Oryzias
latipes]
Length = 192
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|139948903|ref|NP_001077172.1| RING finger protein 185 [Bos taurus]
gi|134024567|gb|AAI34509.1| RNF185 protein [Bos taurus]
gi|296478379|tpg|DAA20494.1| TPA: ring finger protein 185 [Bos taurus]
gi|440894634|gb|ELR47040.1| RING finger protein 185 [Bos grunniens mutus]
Length = 192
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|197099306|ref|NP_001124620.1| E3 ubiquitin-protein ligase RNF185 [Pongo abelii]
gi|75062067|sp|Q5RFK9.1|RN185_PONAB RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|55725163|emb|CAH89448.1| hypothetical protein [Pongo abelii]
Length = 192
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|297691566|ref|XP_002823151.1| PREDICTED: PDZ domain-containing RING finger protein 4 [Pongo
abelii]
Length = 1036
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP EC +C + ++ + T CGH FCA+C+ W + CP+ + L +++
Sbjct: 12 VDPALECKLCGQVFEEPLCTPCGHVFCASCLLPW--AVRRRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
R I + + C Y + C + + E E+HV C
Sbjct: 70 LRSLIQKLRVQCDYQARGCGHSVRLHELEAHVEHC 104
>gi|350411990|ref|XP_003489510.1| PREDICTED: RING finger protein 185-like [Bombus impatiens]
Length = 182
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI---FIDNY 72
FEC+ICL+ K+A+++ CGH FC C+ W++ + + CP+ + ++KD + +
Sbjct: 28 FECNICLDTAKNAVISMCGHLFCWPCLHQWLETRPTRQMCPVCKAAISKDKVIPLYGRGD 87
Query: 73 TRREILENNL 82
T++E NN+
Sbjct: 88 TKQEDPRNNV 97
>gi|281485944|gb|ADA70533.1| TNF receptor-associated factor 6 [Sceloporus olivaceus]
Length = 168
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKAQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISRED----AQYLSLFIHLVQG 371
FY+ GY+ C R++I + A Y+SLF+H++QG
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNTPRCANYISLFVHIMQG 168
>gi|426247529|ref|XP_004017537.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 isoform 1 [Ovis
aries]
gi|426247531|ref|XP_004017538.1| PREDICTED: E3 ubiquitin-protein ligase RNF185 isoform 2 [Ovis
aries]
Length = 192
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|449673612|ref|XP_002160084.2| PREDICTED: TNF receptor-associated factor 4-like [Hydra
magnipapillata]
Length = 334
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 29/234 (12%)
Query: 238 DPNKNQAGDDKSSEGDC--SCKTCGDNSHLLKLVYERMVLLE--QSMLEQKIKVNNFELN 293
D ++NQ ++GDC + C + K R L + + +E+ +K + +
Sbjct: 99 DIHRNQMSQHTDADGDCPLAIVACRYSDVGCKFKARRNELEDHLRESIEEHLKFAH--MR 156
Query: 294 LKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE--MKEINRYFYSACFYSSCFGYRFCTR 351
+++ E ++ + + NG + WK+ N+ +K+ K+ S FY+ +GY+
Sbjct: 157 IRELEIRQETICM---NGKFLWKITNYDLLMKQSATKKDKEKLCSPPFYTGQYGYKLRAE 213
Query: 352 V---NISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE----FSITDEIQS 404
+ + +LSL++ +++GE D IL WPF + F ++ E + ++
Sbjct: 214 AFLNGLGQGKGSHLSLYVVIMKGEYDAILPWPFRQNVDFVLIDQDEEVNNRVNKIWKLSC 273
Query: 405 DKNFDSFKRPVNFFLNKK---AFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
++N D FKRP NK FG F+ + + R ++ E T IK +V
Sbjct: 274 ERNSDYFKRP-----NKSKSLGFGCPKFVSLETL--KSRNYIKE-QTLFIKIEV 319
>gi|301099139|ref|XP_002898661.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104734|gb|EEY62786.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 601
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 22/205 (10%)
Query: 17 FECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
EC+IC E +A T CG FC CI+ W+ +G CP+ + + + +R
Sbjct: 228 LECAICQEVFTNATEATCCGQIFCKDCIERWVSERGS--CPMCREAIGSSLLARSRLAQR 285
Query: 76 EILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIPTNK 135
E N++CPY CS + HV+ C +P P I T +
Sbjct: 286 MANEMNVSCPY--CSEAMKKASLADHVSACDQAPVEPP------PPADVALRQLLIRTAR 337
Query: 136 RNS----KILTVTVFPEHLNMQ-------GSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
NS + L P+ L MQ G + E + + C V + Q + +
Sbjct: 338 LNSSFLARFLVSPSPPQALMMQCYIRTRGGGNYELYTQDTDTLLCTAVRRRQYDMSVSFI 397
Query: 185 LKTSFHLELLFNKYCSDGSQSTNTP 209
+ + +L+ N+ DG+ N P
Sbjct: 398 ISLATNLDTTSNQTNEDGAYPMNAP 422
>gi|354494444|ref|XP_003509347.1| PREDICTED: RING finger protein 185-like [Cricetulus griseus]
Length = 192
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|405133719|gb|AFS17667.1| TNF receptor-associated factor 6, partial [Alligator
mississippiensis]
Length = 176
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M +M+E K + N E + + E + CNG+Y WK+ NF +
Sbjct: 74 HQIRELIAKMETQSINMVELKRTIRNLEGKVAEMEA-------QQCNGIYIWKIENFSSL 126
Query: 324 LKEMKEINRYF-YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIH 367
LK +E +S FY+ GY+ C R++I +AQ ++SLF+H
Sbjct: 127 LKAQEEERPVVTHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVH 175
>gi|340383331|ref|XP_003390171.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 498
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYF 334
+E + EQ+ +++L + E + NG + W++ + + ++ E
Sbjct: 312 IEHKLAEQERTSGMLKVHLSELELQLQASLASTYNGSFLWRIPDVKRRKRDAIEGKITSI 371
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQY---LSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS FY+ GY+ C R ++ + Y LS+F L++GE D +L WPF ++ ++
Sbjct: 372 YSPPFYTGRNGYKMCIRAYLNGDGIGYNTHLSIFFVLMKGEYDPLLKWPFDFKVSLIMVD 431
Query: 392 TSSEFSITDEIQSDKNFDSFKRP 414
+ I + + SF+RP
Sbjct: 432 QDHKRHIVQTFKPSPSSSSFQRP 454
>gi|346466385|gb|AEO33037.1| hypothetical protein [Amblyomma maculatum]
Length = 180
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 23 DGSFECNICLDTAKDAVVSLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 81
Query: 73 TR 74
R
Sbjct: 82 GR 83
>gi|340385412|ref|XP_003391204.1| PREDICTED: TNF receptor-associated factor 4-like [Amphimedon
queenslandica]
Length = 490
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 119/295 (40%), Gaps = 59/295 (20%)
Query: 160 FPCKFYQVGCREVFKSQALLEKHYDLKTSFHLEL------LFNKYCSDGSQSTNTPSHGR 213
PC++ +GC E + L E H D + HL+L L N+ D ++ S
Sbjct: 203 VPCEYSNIGCNERIIREEL-EIHNDEAITIHLQLTTRQMRLTNEKLQDTNEVLQEKSEKL 261
Query: 214 QDTSNQ-KEIEAYLMKNKEHESKLWDPNKN-QAGDDKSSEGDCSCKTCGDNSHLLKLVYE 271
++T+ + KE L KE +L NK Q ++K E + + ++ L K +
Sbjct: 262 KETNEELKETNEIL---KETIEELQKTNKKLQKTNEKLQETNVELQETNEDLQLAKETIQ 318
Query: 272 RMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN 331
+ QTE E N +L + N V K+ K K
Sbjct: 319 SL----------------------QTELQEQNNLLTVSNEVL--KVSQCSQKKK------ 348
Query: 332 RYFYSACFYSSCFGYRFCTRV---NISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFT 388
++S FY+S GY+ V + ++S FI+L+ GE DDIL+WPF G +
Sbjct: 349 --WHSPGFYTSPGGYKMSLSVYPYGTHTGEGTHVSCFIYLMAGEYDDILEWPFQGEVTIE 406
Query: 389 ALNTSSE-------FSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
LN + FS + + ++ FK N + +G +FI + ++
Sbjct: 407 LLNQLEDKNHWKRTFSYDESVPTESKKRVFKGE-----NPQGWGRGHFIPFSKIV 456
>gi|31981757|ref|NP_663330.2| E3 ubiquitin-protein ligase RNF185 [Mus musculus]
gi|26329701|dbj|BAC28589.1| unnamed protein product [Mus musculus]
gi|148708470|gb|EDL40417.1| ring finger protein 185, isoform CRA_b [Mus musculus]
Length = 228
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 70 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 128
Query: 73 TR 74
R
Sbjct: 129 GR 130
>gi|449663059|ref|XP_004205675.1| PREDICTED: uncharacterized protein LOC101237747 [Hydra
magnipapillata]
Length = 396
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 17 FECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDIFIDNYTR 74
EC ICL +++ + + +CGH+FC+ C + + CP D + D +F D +
Sbjct: 16 MECGICLFVVREPVQIMACGHRFCSHCFEKLKTSPAERLRCPKDNGNINLDMVFYDKAAQ 75
Query: 75 REILENNLTCP--YKQCSSQLSIPEYESHVNTCYL 107
R + + C + CS Q S+ E E HVN CY
Sbjct: 76 RAVSNLAVKCSKMHDGCSWQGSLHELEKHVNDCYF 110
>gi|84997589|ref|XP_953516.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304512|emb|CAI76891.1| hypothetical protein, conserved [Theileria annulata]
Length = 189
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDI 67
+FEC+IC + +KD ++T CGH FC +C+ SW++ +NY CPI + +++D++
Sbjct: 20 KFECNICFDDVKDPVVTRCGHLFCWSCLLSWMNR--RNYQCPICQAGISRDNV 70
>gi|198476916|ref|XP_002136852.1| GA28677 [Drosophila pseudoobscura pseudoobscura]
gi|198145179|gb|EDY71883.1| GA28677 [Drosophila pseudoobscura pseudoobscura]
Length = 242
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + + N
Sbjct: 126 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPSRKLCPVCKAAVDKDKVIPLYGRNS 185
Query: 73 TRREILENNL 82
TR+E N +
Sbjct: 186 TRQEDPRNKV 195
>gi|340383333|ref|XP_003390172.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 510
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RYF 334
+E + EQ+ +++L + E + NG + W++ + + ++ E
Sbjct: 324 IEHKLAEQERTSGMLKVHLSELELQLQASLASTYNGSFLWRIPDVKRRKRDAIEGKITSI 383
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQY---LSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS FY+ GY+ C ++ + Y LS+F L++GE D +L WPF + ++
Sbjct: 384 YSPPFYTGRNGYKMCIYAYLNGDGIGYNTHLSIFFGLMKGEYDPLLKWPFDYEVSLIMVD 443
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ I + SF+RP + A G+ F + +LD ++ ED +V
Sbjct: 444 QDHKRHIVQTFKPSPTSSSFQRPKSDM--NIASGYPKFAELT-ILD-NESYVKEDVMYV 498
>gi|195041004|ref|XP_001991176.1| GH12208 [Drosophila grimshawi]
gi|193900934|gb|EDV99800.1| GH12208 [Drosophila grimshawi]
Length = 273
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + + N
Sbjct: 119 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNS 178
Query: 73 TRREILENNL 82
TR+E N +
Sbjct: 179 TRQEDPRNKV 188
>gi|119580350|gb|EAW59946.1| ring finger protein 185, isoform CRA_d [Homo sapiens]
Length = 163
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>gi|221104807|ref|XP_002157410.1| PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Hydra
magnipapillata]
Length = 185
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI 67
FEC+ICL+ +D +++ CGH FC C+ WI+ + + CP+ + ++KD +
Sbjct: 26 FECNICLDIAQDPVVSMCGHLFCWPCLHRWIETRPARPMCPVCKAAISKDKV 77
>gi|170596484|ref|XP_001902780.1| Hypothetical RING finger protein C16C10.7 in chromosome III,
putative [Brugia malayi]
gi|158589327|gb|EDP28370.1| Hypothetical RING finger protein C16C10.7 in chromosome III,
putative [Brugia malayi]
Length = 159
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDV-KGKNYCPIDEKVLTKDDIFIDNYTR 74
F+C+ICL+ +DA+++ CGH FC C+ W+D + CP+ + ++KD + I Y R
Sbjct: 1 FDCNICLDVARDAVVSMCGHLFCWPCLHQWLDTCPNRQLCPVCKSAISKDKV-IPLYGR 58
>gi|126336143|ref|XP_001364450.1| PREDICTED: e3 ubiquitin-protein ligase PDZRN3 [Monodelphis
domestica]
Length = 1057
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++DP F+C++C + L+D + T CGH FCA C+ W+ +G CP+ + ++ ++
Sbjct: 11 DVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGS--CPVQCQRISTKELNHVL 68
Query: 72 YTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+ IL+ ++ C + + C + + + HV C
Sbjct: 69 PLKSLILKLDIKCDHHGRGCERVVKLQQLGEHVEMC 104
>gi|226482674|emb|CAX73936.1| TNF receptor-associated factor 3 [Schistosoma japonicum]
Length = 497
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKV-NNFELNLKQTEEIEDNVVLKLCNGVYF-WKMYNFP 321
+LL L ++M LL ++ + ++ N+ E +K+ +E C G F WK+ ++
Sbjct: 296 NLLNLSVQQMSLLIEAQTKTYTEIRNSLEYQMKRITTLEQ------CFGPPFLWKIDSYS 349
Query: 322 AKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDIL 377
KL + + +S FY+ FGYR V++ +++S++ L +G++D +L
Sbjct: 350 EKLNNARTGKQNALFSTPFYTHRFGYRMALSVSLYGNGEAKGKFMSVYACLFRGDHDSLL 409
Query: 378 DWPFVGRIRFTALNTSSEFSITDEI 402
WPF ++ FT ++ + E + I
Sbjct: 410 QWPFSHQLTFTLIDQNPEINARKPI 434
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 85/219 (38%), Gaps = 41/219 (18%)
Query: 13 LDPRFECSICLEYLKDAIL-TSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
LD + C C L+ L CGH+ C+ C+ K CP+D++ L KD + +D
Sbjct: 84 LDNIYRCVNCKCVLRVPFLFEDCGHRCCSGCVPDIFRATSK--CPVDKQNLKKDRVHLDK 141
Query: 72 YTRREILENNLTCPY--KQCSSQLSIPEYESHVNTCYLK-----------YSQPSVEDIT 118
+ ++ N+ C Y + C + E H+N C K + + S+E
Sbjct: 142 AFQEQMDALNVRCSYYAEGCPWMGILNELGCHLNQCEYKIVLCPNECGTEFQRKSIEGHV 201
Query: 119 ----------------------DSPTSSFRNTSGIP-TNKRNSKILTVTVFPEHLNMQGS 155
++ S+ +P NK + ++ PEHL +
Sbjct: 202 KNGCPKRNVQCKFCGAKFSVEKEAKHISYCREYPLPCPNKCEMTSIPRSLIPEHLKNE-C 260
Query: 156 SNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELL 194
S +N C F GC E + +++H +L HL LL
Sbjct: 261 SRQNLRCPFNIHGC-EYRGRKYKMDQHLELSLIKHLNLL 298
>gi|242080679|ref|XP_002445108.1| hypothetical protein SORBIDRAFT_07g004210 [Sorghum bicolor]
gi|241941458|gb|EES14603.1| hypothetical protein SORBIDRAFT_07g004210 [Sorghum bicolor]
Length = 407
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI-DEKVLTKD 65
FEC+ICLE + ++TSCGH FC C+ W+ + ++ CP+ +VLT D
Sbjct: 204 FECTICLELARQPVVTSCGHLFCWPCLYQWLHAQSSSFECPVCKGEVLTGD 254
>gi|294939978|ref|XP_002782617.1| alpha methylacyl-CoA racemase, putative [Perkinsus marinus ATCC
50983]
gi|239894469|gb|EER14412.1| alpha methylacyl-CoA racemase, putative [Perkinsus marinus ATCC
50983]
Length = 607
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 9 NKLNLDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
+K ++ P CS+C E D + CGH FC C+ W++++ CP + K +
Sbjct: 24 DKDSISPNLHCSVCCEVFTDPVCAVPCGHTFCRECLYQWLELR-NTTCPECRATIIKQNC 82
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
D R+ E ++ CP++ C + E+H+ C
Sbjct: 83 HNDLMARKFFDEQDVYCPFRGCQWDGKHGDLEAHMGDC 120
>gi|226482672|emb|CAX73935.1| TNF receptor-associated factor 3 [Schistosoma japonicum]
Length = 497
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKV-NNFELNLKQTEEIEDNVVLKLCNGVYF-WKMYNFP 321
+LL L ++M LL ++ + ++ N+ E +K+ +E C G F WK+ ++
Sbjct: 296 NLLNLSVQQMSLLIEAQTKTYTEIRNSLEYQMKRITTLEQ------CFGPPFLWKIDSYS 349
Query: 322 AKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDIL 377
KL + + +S FY+ FGYR V++ +++S++ L +G++D +L
Sbjct: 350 EKLNNARTGKQNALFSTPFYTHRFGYRMALSVSLYGNGEAKGKFMSVYACLFRGDHDSLL 409
Query: 378 DWPFVGRIRFTALNTSSEFSITDEI 402
WPF ++ FT ++ + E + I
Sbjct: 410 QWPFSHQLTFTLIDQNPEINARKPI 434
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 41/219 (18%)
Query: 13 LDPRFECSICLEYLKDAIL-TSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
LD + C C L+ L CGH+ C+ C+ K CP+D++ L KD + +D
Sbjct: 84 LDNIYRCVNCKCVLRVPFLFEDCGHRCCSGCVPDIFRATSK--CPVDKQNLKKDRVHLDK 141
Query: 72 YTRREILENNLTCPY--KQCSSQLSIPEYESHVNTCYLK-----------YSQPSVEDIT 118
+ ++ N+ C Y + C + E H+N C K + + S+ED
Sbjct: 142 AFQEQMDALNVRCSYYAEGCPWMGILNELGCHLNQCEYKIVLCPNECGAEFQRKSIEDHV 201
Query: 119 ----------------------DSPTSSFRNTSGIP-TNKRNSKILTVTVFPEHLNMQGS 155
++ S+ +P NK + ++ PEHL +
Sbjct: 202 KNGCPKRNIQCKFCGAKFSVEKEAKHISYCREYPLPCPNKCEMTSIPRSLIPEHLKNE-C 260
Query: 156 SNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELL 194
S +N C F GC E + +++H +L HL LL
Sbjct: 261 SRQNLRCPFNIHGC-EYRGRKYKMDQHLELSLIKHLNLL 298
>gi|195172603|ref|XP_002027086.1| GL14111 [Drosophila persimilis]
gi|195175279|ref|XP_002028384.1| GL22919 [Drosophila persimilis]
gi|194112879|gb|EDW34922.1| GL14111 [Drosophila persimilis]
gi|194117984|gb|EDW40027.1| GL22919 [Drosophila persimilis]
Length = 280
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + + N
Sbjct: 126 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPSRKLCPVCKAAVDKDKVIPLYGRNS 185
Query: 73 TRREILENNL 82
TR+E N +
Sbjct: 186 TRQEDPRNKV 195
>gi|340385222|ref|XP_003391109.1| PREDICTED: TNF receptor-associated factor 2-like [Amphimedon
queenslandica]
Length = 519
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 275 LLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN-RY 333
L EQ +KV+ EL L+ + NG + W++ + + ++ E
Sbjct: 337 LAEQERTSGMLKVHLSELELQLQASLASTY-----NGSFLWRIPDVKRRKRDAIEGKITS 391
Query: 334 FYSACFYSSCFGYRFCTRVNISREDAQY---LSLFIHLVQGENDDILDWPFVGRIRFTAL 390
YS FY+ GY+ C R ++ + Y LS+F L++GE D +L WPF ++ +
Sbjct: 392 IYSPPFYTGRNGYKMCIRAYLNGDGIGYNTHLSIFFVLMKGEYDPLLKWPFDYKVSLIMV 451
Query: 391 NTSSEFSITDEIQSDKNFDSFKRP 414
+ + I + + SF+RP
Sbjct: 452 DQDHKRHIVQTFKPSPSSSSFQRP 475
>gi|57526717|ref|NP_998202.1| E3 ubiquitin-protein ligase RNF185 [Danio rerio]
gi|82202590|sp|Q6PC78.1|RN185_DANRE RecName: Full=E3 ubiquitin-protein ligase RNF185; AltName:
Full=RING finger protein 185
gi|37590321|gb|AAH59445.1| Zgc:73070 [Danio rerio]
Length = 194
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 36 DSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 94
Query: 73 TR 74
R
Sbjct: 95 GR 96
>gi|405133735|gb|AFS17675.1| TNF receptor-associated factor 6, partial [Haematopus ater]
Length = 176
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M E K + N E+ + + E + CNG+Y WK+ NF +
Sbjct: 74 HQIRELIAKMETQNTHMAELKRTIRNLEVKITEMEA-------QQCNGIYIWKIENF-SG 125
Query: 324 LKEMKEINR--YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIH 367
L++ +E R +S FY+ GY+ C R++I +AQ ++SLF+H
Sbjct: 126 LQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVH 175
>gi|350584502|ref|XP_003481759.1| PREDICTED: PDZ domain-containing RING finger protein 4 isoform 1
[Sus scrofa]
Length = 1042
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP F+C +C + L++ + T CGH FCA C+ W CP+ + L +++
Sbjct: 12 VDPDFQCRLCGQVLEEPLCTPCGHVFCARCLRPW--AARWRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R + + + C Y+ C + + E +HV C
Sbjct: 70 LRSLVQKLRIQCDYRARGCGRSVRLRELAAHVERC 104
>gi|341894769|gb|EGT50704.1| hypothetical protein CAEBREN_00306 [Caenorhabditis brenneri]
Length = 342
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 331 NRYFYSACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIR 386
+R +S FYS +GY+ + D +Y S+F+ L++GE DDIL+WPF +
Sbjct: 181 HRSIFSQPFYSHGYGYKMMA-IAAPYGDGYAFREYFSVFVCLMKGEWDDILEWPFRCDVS 239
Query: 387 FTALNTSSEFSITDEIQSDKNFDS---FKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFL 443
F+ L+ + +T I ++ + +RP L FGF NF+ +A V + F
Sbjct: 240 FSILSDDKKELLTKTIYVNEMPEIQEFLERPEG--LRNGTFGFQNFLPLAKVNE----FA 293
Query: 444 MEDDTFV 450
+ D F+
Sbjct: 294 ADGDIFI 300
>gi|195447492|ref|XP_002071238.1| GK25237 [Drosophila willistoni]
gi|194167323|gb|EDW82224.1| GK25237 [Drosophila willistoni]
Length = 292
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + + N
Sbjct: 138 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNS 197
Query: 73 TRREILENNL 82
TR+E N +
Sbjct: 198 TRQEDPRNKV 207
>gi|281485966|gb|ADA70544.1| TNF receptor-associated factor 6 [Uma scoparia]
Length = 168
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR-YFYSAC 338
M Q ++ + + ++ EE + + CNG++ WK+ +F LK +E +S
Sbjct: 72 METQNSQMGDLKRTIRNLEEKITEMEAQQCNGIFIWKIEHFSVYLKTQEEERPVVIHSPG 131
Query: 339 FYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQG 371
FY+ GY+ C R++I +A Y+SLFIH +QG
Sbjct: 132 FYTGKPGYKLCMRLHIQLPNAAKCANYISLFIHTMQG 168
>gi|390343030|ref|XP_785402.2| PREDICTED: E3 ubiquitin-protein ligase RNF185-like
[Strongylocentrotus purpuratus]
Length = 221
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y R
Sbjct: 65 FECNICLDTAKDAVVSRCGHLFCWPCLYQWLETRPNRQVCPVCKAGISRDKV-IPLYGR 122
>gi|116781137|gb|ABK21979.1| unknown [Picea sitchensis]
gi|148908424|gb|ABR17325.1| unknown [Picea sitchensis]
Length = 240
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDIFIDNYTRR 75
FEC+ICLE +D I+T CGH FC C+ W+ K+ CP+ K L ++D + Y R
Sbjct: 42 FECNICLELAQDPIVTLCGHLFCWPCLYKWLHGHSKSQECPVC-KALVEEDKIVPLYGRG 100
Query: 76 EI 77
++
Sbjct: 101 KV 102
>gi|443732500|gb|ELU17184.1| hypothetical protein CAPTEDRAFT_84923, partial [Capitella teleta]
Length = 178
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+D CSIC + L+DA+LT CGH FC C+D W+ + CP + ++
Sbjct: 12 VDDNLLCSICSQVLQDAVLTPCGHSFCQECLDQWLARPERITCPHCRGAVIREQARPILA 71
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R +L + C + C + +++ SH TC
Sbjct: 72 LRNFVLSLKIHCVNRSLGCEALITLDTLTSHAETC 106
>gi|195172605|ref|XP_002027087.1| GL14112 [Drosophila persimilis]
gi|194112880|gb|EDW34923.1| GL14112 [Drosophila persimilis]
Length = 251
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + + N
Sbjct: 97 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPSRKLCPVCKAAVDKDKVIPLYGRNS 156
Query: 73 TRREILENNL 82
TR+E N +
Sbjct: 157 TRQEDPRNKV 166
>gi|70952403|ref|XP_745372.1| c3h4-type ring finger protein [Plasmodium chabaudi chabaudi]
gi|56525674|emb|CAH88108.1| c3h4-type ring finger protein, putative [Plasmodium chabaudi
chabaudi]
Length = 209
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIF 68
FEC+IC + ++D ++T CGH FC C+ +WI K N CP+ + +TK+++
Sbjct: 52 FECNICFDDVRDPVVTRCGHLFCWFCLSAWI--KKNNDCPVCKAEVTKENVI 101
>gi|341898381|gb|EGT54316.1| hypothetical protein CAEBREN_04844 [Caenorhabditis brenneri]
Length = 344
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 331 NRYFYSACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIR 386
+R +S FYS +GY+ + D +Y S+F+ L++GE DDIL+WPF +
Sbjct: 183 HRSIFSQPFYSHGYGYKMMA-IAAPYGDGYAFREYFSVFVCLMKGEWDDILEWPFRCDVS 241
Query: 387 FTALNTSSEFSIT-----DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRG 441
F+ L+ + +T +E+ + F +RP L FGF NF+ +A V +
Sbjct: 242 FSILSDDKKELLTKTIYVNEMPEIQEF--LERPEG--LRNGTFGFQNFLPLAKVNE---- 293
Query: 442 FLMEDDTFV 450
F + D F+
Sbjct: 294 FAADGDIFI 302
>gi|168013805|ref|XP_001759457.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689387|gb|EDQ75759.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 668
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 2 EHQPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKV 61
+++ + N+D F C ICL +KDA LT CGH FC +CI +K +N CP +
Sbjct: 17 KYESAVRARANMDRDFLCPICLHTMKDAFLTRCGHNFCYSCI--MTHLKNRNNCPCCAQY 74
Query: 62 LTKD 65
LT D
Sbjct: 75 LTID 78
>gi|145352331|ref|XP_001420503.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580737|gb|ABO98796.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 192
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD 65
+FEC++C E ++ ++T CGH +C CI++W+ V CP+ + +TKD
Sbjct: 70 KFECNVCFEVAREPVVTPCGHLYCWRCINTWLSVGDNVACPVCKGEMTKD 119
>gi|348542856|ref|XP_003458900.1| PREDICTED: tripartite motif-containing protein 16-like, partial
[Oreochromis niloticus]
Length = 501
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWI---DVKGKNYCPIDEKVLTKDDIFID 70
D +F C++CL+ LKD + CGH +C +CI+++ +VKG + CP + T I +
Sbjct: 10 DRQFCCAVCLDILKDPVTIPCGHNYCMSCIETYWKAENVKGTHSCPQCRQAFTPRPILVK 69
Query: 71 NYTRREILE 79
N E++E
Sbjct: 70 NTMLAELVE 78
>gi|348527898|ref|XP_003451456.1| PREDICTED: E3 ubiquitin/ISG15 ligase TRIM25-like [Oreochromis
niloticus]
Length = 379
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 6 VANNKLNLDP-RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTK 64
+A + LD + CSICL+ LK + CGH +C CI ++ D K + CP ++ T+
Sbjct: 1 MAQRTIQLDQEKLSCSICLQLLKHPVTIPCGHSYCMDCIKNYWDEKKTHSCPQCREIFTR 60
Query: 65 DDIFIDNYTRREILEN 80
+ + N E++E+
Sbjct: 61 RPVLVKNTMLAELVED 76
>gi|148227240|ref|NP_001090510.1| PDZ domain containing ring finger 3 [Xenopus laevis]
gi|50417458|gb|AAH77302.1| Pdzrn3 protein [Xenopus laevis]
Length = 1029
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 32/120 (26%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-------------- 58
+DP F+C++C L+D + T CGH FCA C+ W+ +G CP+
Sbjct: 12 VDPDFKCNLCNRVLEDPLTTPCGHVFCAGCVLPWVVQQGS--CPVKCQRISAKELNHVLP 69
Query: 59 -EKVLTKDDIFIDNYTR--------REILENNLTCPY-------KQCSSQLSIPEYESHV 102
+ ++ K DI DNY+R + E+ C + K CS L++ + ++H+
Sbjct: 70 LKSLILKLDIKCDNYSRGCDKVVKLHSLAEHAEMCDFSPAKCRNKGCSEVLNLRDMDAHM 129
>gi|449283520|gb|EMC90136.1| PDZ domain-containing RING finger protein 3, partial [Columba
livia]
Length = 308
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 32/120 (26%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKD------ 65
+DP F+C++C + L+D + T CGH FCA C+ W+ +G CP++ +++ TK+
Sbjct: 12 VDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGS--CPVNCQRISTKELNHVLP 69
Query: 66 --------DIFIDNYTR--------REILENNLTCPY-------KQCSSQLSIPEYESHV 102
DI DN+ R + + E+ TC + + C L++ + ESH+
Sbjct: 70 LKSLILKLDIKCDNHARGCEAVVPLQHLGEHTETCDFSPAKCRNRGCRQVLNLRDVESHM 129
>gi|91090264|ref|XP_970269.1| PREDICTED: similar to ring finger protein 5 [Tribolium castaneum]
gi|270013784|gb|EFA10232.1| hypothetical protein TcasGA2_TC012429 [Tribolium castaneum]
Length = 190
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ +DA+++ CGH FC C+ W++ + + CP+ + ++K+ + I Y
Sbjct: 31 DRMFECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPNRQVCPVCKAAISKEKV-IPLY 89
Query: 73 TR 74
R
Sbjct: 90 GR 91
>gi|71029778|ref|XP_764532.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351486|gb|EAN32249.1| hypothetical protein TP04_0895 [Theileria parva]
Length = 284
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDI 67
+FEC+IC + +KD ++T CGH FC +C+ SW++ +NY CPI + ++++++
Sbjct: 20 KFECNICFDEVKDPVVTRCGHLFCWSCLLSWMNR--RNYQCPICQSGISRENV 70
>gi|348538130|ref|XP_003456545.1| PREDICTED: zinc-binding protein A33-like [Oreochromis niloticus]
Length = 406
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI 57
A++ L + RF CSICL+ D + TSCGH FC CI + DV + CP+
Sbjct: 3 ADSNLQSEDRFLCSICLDVFTDPVTTSCGHNFCKKCITQYWDVHERCQCPL 53
>gi|373838784|ref|NP_001243321.1| PDZ domain-containing RING finger protein 3 [Danio rerio]
gi|344953336|gb|AEN28595.1| PDZ domain-containing ring finger 3 [Danio rerio]
Length = 1053
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 32/123 (26%)
Query: 10 KLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKD--- 65
K +DP F+C++C + L+D + T CGH FCA C+ W V ++ CP+ +++ TK+
Sbjct: 9 KGAVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPW--VVQQSSCPVKCQRISTKELNH 66
Query: 66 -----------DIFIDNYTR--------REILENNLTCPY-------KQCSSQLSIPEYE 99
DI DN+ R + + E+ C Y K CS L++ + +
Sbjct: 67 VLPLKNLILKLDIKCDNHARGCEKIVKLQHLAEHAEMCDYSPAKCRNKGCSEVLNLKDMD 126
Query: 100 SHV 102
+H+
Sbjct: 127 AHM 129
>gi|168044506|ref|XP_001774722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674022|gb|EDQ60537.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIF 68
++D F+C ICL+ ++DA LTSCGH FC +CI + +D++ CP + LT + +
Sbjct: 29 DVDKDFQCPICLQTIEDAFLTSCGHFFCYSCITTHLDIRSN--CPSCARYLTSEQLI 83
>gi|89269933|emb|CAJ81763.1| ring finger protein 125 [Xenopus (Silurana) tropicalis]
Length = 189
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + ++++ + I Y
Sbjct: 32 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISREKV-IPLY 90
Query: 73 TR 74
R
Sbjct: 91 GR 92
>gi|301618028|ref|XP_002938429.1| PREDICTED: PDZ domain-containing RING finger protein 3-like
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 1062
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-------------- 58
+DP F+C++C L+D + T CGH FCA C+ W+ +G CP+
Sbjct: 12 VDPDFKCNLCNRVLEDPLTTPCGHVFCAGCVLPWVVQQGS--CPVKCQRISAKELNHVLP 69
Query: 59 -EKVLTKDDIFIDNYTR 74
+ ++ K DI DNY+R
Sbjct: 70 LKSLILKLDIKCDNYSR 86
>gi|301618030|ref|XP_002938430.1| PREDICTED: PDZ domain-containing RING finger protein 3-like
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 1033
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-------------- 58
+DP F+C++C L+D + T CGH FCA C+ W+ +G CP+
Sbjct: 12 VDPDFKCNLCNRVLEDPLTTPCGHVFCAGCVLPWVVQQGS--CPVKCQRISAKELNHVLP 69
Query: 59 -EKVLTKDDIFIDNYTR 74
+ ++ K DI DNY+R
Sbjct: 70 LKSLILKLDIKCDNYSR 86
>gi|326676346|ref|XP_003200552.1| PREDICTED: e3 ubiquitin-protein ligase RNF5-like [Danio rerio]
Length = 205
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICL+ +DA+++ CGH FC C+ W++ + + CP+ + +++D + I Y R
Sbjct: 45 FECNICLDTARDAVISLCGHLFCWPCLHQWLETRPSRQQCPVCKAGISRDKV-IPLYGR 102
>gi|2997696|gb|AAC08579.1| unknown [Drosophila heteroneura]
Length = 131
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + + N
Sbjct: 5 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNS 64
Query: 73 TRREILENNL 82
TR+E N +
Sbjct: 65 TRQEDPRNKV 74
>gi|395533777|ref|XP_003768929.1| PREDICTED: tripartite motif-containing protein 26 [Sarcophilus
harrisii]
Length = 537
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK----GKNYCPIDEKVLTKDDI 67
L+ CSICL+YL+D + CGH FC C+ ID++ G+ CP+ +K KD+I
Sbjct: 9 TLEEEVTCSICLDYLRDPVTIDCGHVFCRGCV---IDIRAPPGGRPACPLCKKTFKKDNI 65
>gi|432091652|gb|ELK24673.1| Tripartite motif-containing protein 60 [Myotis davidii]
Length = 687
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCPI 57
F+C ICL+YL+D + TSCGH FC +CI W ++G CP+
Sbjct: 281 FKCPICLDYLRDPVTTSCGHNFCPSCIHQRWEGLQGTFPCPV 322
>gi|147903879|ref|NP_001088405.1| ring finger protein 185 [Xenopus laevis]
gi|54261639|gb|AAH84303.1| LOC495261 protein [Xenopus laevis]
Length = 189
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + ++++ + I Y
Sbjct: 32 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISREKV-IPLY 90
Query: 73 TR 74
R
Sbjct: 91 GR 92
>gi|195427962|ref|XP_002062044.1| GK16866 [Drosophila willistoni]
gi|194158129|gb|EDW73030.1| GK16866 [Drosophila willistoni]
Length = 361
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 12 NLDPRFECSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFID 70
N+D C IC E L+D + +S C H +C CI WI K CP+D L +
Sbjct: 11 NVDEELICPICTEVLEDPMQSSSCEHAYCRVCIQKWI--IEKQICPVDRTELLSGQLVPA 68
Query: 71 NYTRREILEN-NLTCPYKQ--CSSQLSIPEYESHVNTC 105
+ R +L + C + + C L + E+ HV+TC
Sbjct: 69 SRLMRNMLARLRIKCVFAENGCEQLLQLDEFRRHVDTC 106
>gi|195394263|ref|XP_002055765.1| GJ18601 [Drosophila virilis]
gi|194150275|gb|EDW65966.1| GJ18601 [Drosophila virilis]
Length = 272
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + + N
Sbjct: 121 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNS 180
Query: 73 TRREILENNL 82
TR+E N +
Sbjct: 181 TRQEDPRNKV 190
>gi|449688949|ref|XP_004211895.1| PREDICTED: TNF receptor-associated factor 3-like [Hydra
magnipapillata]
Length = 162
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 313 YFWKMYNFPAKL----KEMKEINRYFYSACFYSSCFGYRFCTRV---NISREDAQYLSLF 365
Y W + N ++ K MK++N S FYS+ FGY+ ++ + ++SLF
Sbjct: 20 YIWCLDNIDSRFNKEKKSMKDLNTC--STPFYSAPFGYKLSMQIYLNGLGEHRGSHISLF 77
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSE 395
+++V+GE D +LDWPF ++ + L+ S +
Sbjct: 78 LNIVKGEYDCLLDWPFTKMVKLSLLDQSGK 107
>gi|224118164|ref|XP_002331573.1| predicted protein [Populus trichocarpa]
gi|222873797|gb|EEF10928.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
LD C IC++ +KDA LTSCGH FC CI + ++ KN CP LT + IF N+
Sbjct: 30 LDKDILCPICMQIIKDAFLTSCGHSFCYLCITT--HLRNKNDCPCCSHYLTNNHIF-PNF 86
Query: 73 TRREILE 79
++LE
Sbjct: 87 LLNKLLE 93
>gi|195175281|ref|XP_002028385.1| GL22918 [Drosophila persimilis]
gi|194117985|gb|EDW40028.1| GL22918 [Drosophila persimilis]
Length = 241
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI---FIDNY 72
+EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + +D + + N
Sbjct: 87 YECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPSRKLCPVCKAAVDRDKVIPLYGRNS 146
Query: 73 TRREILENNL 82
TR+E N +
Sbjct: 147 TRQEDPRNKV 156
>gi|334323679|ref|XP_001368421.2| PREDICTED: tripartite motif-containing protein 39 [Monodelphis
domestica]
Length = 492
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKV 61
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCRACITRWWEELERDFPCPVCRKT 72
>gi|224009131|ref|XP_002293524.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970924|gb|EED89260.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1665
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 16 RFECSICLEYLKDAILTSCGH---KFCAACIDSWI------------DVKGKNYCPIDEK 60
+ EC+IC EY+ I CG+ +FC C++ + D CP
Sbjct: 227 KLECAICFEYMD--IPVGCGNCQTRFCRPCLERVLRQELSNRSPQSTDPPNSARCPHCRS 284
Query: 61 VLTKDDIFIDNYTRREILE--NNLTCPYKQCSSQLSIPEYESHVNTC 105
T+ DI IDN +EI E +TCP+K C+++L I + H +C
Sbjct: 285 FFTRQDIKIDNQLAQEIAECLETVTCPFKGCNTELQIGLLKEHERSC 331
>gi|380793339|gb|AFE68545.1| tripartite motif-containing protein 39 isoform 2, partial [Macaca
mulatta]
Length = 403
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|405133761|gb|AFS17688.1| TNF receptor-associated factor 6, partial [Apteryx haastii]
gi|405133763|gb|AFS17689.1| TNF receptor-associated factor 6, partial [Apteryx owenii]
gi|405133765|gb|AFS17690.1| TNF receptor-associated factor 6, partial [Apteryx australis
mantelli]
gi|405133767|gb|AFS17691.1| TNF receptor-associated factor 6, partial [Apteryx rowi]
gi|405133769|gb|AFS17692.1| TNF receptor-associated factor 6, partial [Apteryx australis]
Length = 176
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H ++ + +M M+E K + N E + + E + CNG+Y WK+ NF +
Sbjct: 74 HQIRELIAKMETQNTHMVELKRTIRNLEGKITEMEA-------QQCNGIYIWKIENF-SG 125
Query: 324 LKEMKEINR--YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIH 367
L++ +E R +S FY+ GY+ C R++I +AQ ++SLF+H
Sbjct: 126 LQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPNAQRCANFISLFVH 175
>gi|355749656|gb|EHH54055.1| hypothetical protein EGM_14798 [Macaca fascicularis]
Length = 468
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCPI 57
VA L +CSICL+YL+D + CGH FC +CI SW+D++ CP+
Sbjct: 3 VAAALTGLQAEAKCSICLDYLRDPVTIECGHNFCRSCIQQSWLDLQELFPCPV 55
>gi|47214981|emb|CAG01315.1| unnamed protein product [Tetraodon nigroviridis]
Length = 577
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 171/454 (37%), Gaps = 96/454 (21%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVL 62
NL+ + C C + L+ + CGH+FC C + G C I E +L
Sbjct: 27 NLESKHLCKSCQKVLRRPLQAQCGHRFCCFCFRKIVSA-GPQTCRACISEDLFEEPASIL 85
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITDS 120
F DN RRE+ CP + C+ +I E+E+ H ++C ++ PS +++ +
Sbjct: 86 KSGGAFPDNAARREVEALAAVCPNEGCTWTGTIKEFEARHEDSCDFMIILCPSCKELMRA 145
Query: 121 PTSSFRNTSGIPTNKRNSKILTVT-----------VFPEHLNM-QGSSNENF-------- 160
N P N K + P++ M +G S
Sbjct: 146 NEQERHNERECPERTLNCKYCKEAFQLKSIKAHDEICPKYPMMCEGCSRRKIPREKYVDH 205
Query: 161 ---------PCKFYQVGCREVFKSQALLEKHYDLKTSF-HLELLFN-------KYCSDGS 203
PC+F+ VGC + + + E ++ + S+ HL LL + S
Sbjct: 206 IKYCSKFKSPCRFHVVGCNMSVEKEKIHE--HERQCSYEHLNLLLHFIMGIKISLESLQP 263
Query: 204 QSTNTPSHGRQDTSNQ-KEIEAYLMKNKEHESKLWDPNK-------NQAGDDKSSEGDCS 255
QS + +H + +++E + + S+L+ + ++A K +E
Sbjct: 264 QSLDVATHKLLELHQSLRDLEVKMSQLSPPRSRLYRAAEEPLWSCSSRAKKTKVAELSRR 323
Query: 256 CK------------TCGDNSHLLKL-----VYERMVLLEQSMLEQKIKVNNFELNLKQTE 298
C+ C N + + Y R L+Q +E +NN L++T
Sbjct: 324 CQELEVKVSTLENIACVLNREVERSCTTMDAYNRQHRLDQDKIE---ILNNKVRQLERTV 380
Query: 299 EIEDNVVLKL-----------CNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSSCFGYR 347
+ D ++++ +GV+ WK+ +F K ++ + +S
Sbjct: 381 SLRDLSIVEMDEKMRELSAATYDGVFVWKIADFTKKRQDAVA----GRAPAMFSPDVLRI 436
Query: 348 FCTRVNISREDAQYLSLFIHLVQGENDDILDWPF 381
+ R +LSLF +++G +D +L WPF
Sbjct: 437 YLNGDGTGR--GSHLSLFFVVMRGHSDALLKWPF 468
>gi|431907048|gb|ELK11166.1| Tripartite motif-containing protein 39 [Pteropus alecto]
Length = 546
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKV 61
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 61 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT 111
>gi|395831886|ref|XP_003789014.1| PREDICTED: tripartite motif-containing protein 39-like [Otolemur
garnettii]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|403297405|ref|XP_003939556.1| PREDICTED: tripartite motif-containing protein 39-like [Saimiri
boliviensis boliviensis]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|440896155|gb|ELR48166.1| Tripartite motif-containing protein 39 [Bos grunniens mutus]
Length = 502
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|68356682|ref|XP_698724.1| PREDICTED: tripartite motif-containing protein 16 [Danio rerio]
Length = 562
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACI-DSW--IDVKGKNYCPIDEKVLTKDDIFI 69
L +F C ICL+ LKD + CGH FC +CI DSW D KG CP + T
Sbjct: 9 LQDKFTCLICLDLLKDPVAIPCGHSFCMSCISDSWDQDDQKGVYSCPQCRQTFTPRPALG 68
Query: 70 DNYTRREILEN 80
N E++EN
Sbjct: 69 KNLILTEVVEN 79
>gi|354503030|ref|XP_003513584.1| PREDICTED: tripartite motif-containing protein 39-like [Cricetulus
griseus]
Length = 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLTKDDIF-- 68
NL CS+CLEYLK+ ++ CGH FC CI W D++ CP+ K +++
Sbjct: 23 NLQVEANCSVCLEYLKEPVILECGHNFCKVCITRCWEDLEQDFPCPVCRKTSQYQNLWPN 82
Query: 69 --------IDNY---TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ 111
I Y R++ E NL +++ S L + E+ TC + ++Q
Sbjct: 83 RQLGSMVEIAKYLKRVRQKTREENLCFEHQEAMSLLCYEDQEAVCPTCAIYHTQ 136
>gi|60360008|dbj|BAD90223.1| mKIAA4179 protein [Mus musculus]
Length = 500
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 34 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 80
>gi|25777698|ref|NP_742013.1| E3 ubiquitin-protein ligase TRIM39 isoform 2 [Homo sapiens]
gi|332245871|ref|XP_003272075.1| PREDICTED: ribonuclease P protein subunit p21 isoform 1 [Nomascus
leucogenys]
gi|397471686|ref|XP_003807417.1| PREDICTED: tripartite motif-containing protein 39-like isoform 2
[Pan paniscus]
gi|397471688|ref|XP_003807418.1| PREDICTED: tripartite motif-containing protein 39-like isoform 3
[Pan paniscus]
gi|426352214|ref|XP_004043611.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39 isoform 1 [Gorilla
gorilla gorilla]
gi|426352216|ref|XP_004043612.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39 isoform 2 [Gorilla
gorilla gorilla]
gi|426352218|ref|XP_004043613.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39 isoform 3 [Gorilla
gorilla gorilla]
gi|14043332|gb|AAH07661.1| TRIM39 protein [Homo sapiens]
gi|23243241|gb|AAH34985.1| Tripartite motif-containing 39 [Homo sapiens]
gi|30583579|gb|AAP36034.1| tripartite motif-containing 39 [Homo sapiens]
gi|60656009|gb|AAX32568.1| tripartite motif-containing 39 [synthetic construct]
gi|119623688|gb|EAX03283.1| tripartite motif-containing 39, isoform CRA_a [Homo sapiens]
gi|119623690|gb|EAX03285.1| tripartite motif-containing 39, isoform CRA_a [Homo sapiens]
gi|306921553|dbj|BAJ17856.1| tripartite motif-containing 39 [synthetic construct]
gi|355561490|gb|EHH18122.1| hypothetical protein EGK_14667 [Macaca mulatta]
gi|384943622|gb|AFI35416.1| tripartite motif-containing protein 39 isoform 2 [Macaca mulatta]
gi|410219136|gb|JAA06787.1| tripartite motif containing 39 [Pan troglodytes]
gi|410265864|gb|JAA20898.1| tripartite motif containing 39 [Pan troglodytes]
gi|410304706|gb|JAA30953.1| tripartite motif containing 39 [Pan troglodytes]
gi|410332223|gb|JAA35058.1| tripartite motif containing 39 [Pan troglodytes]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|190360667|ref|NP_001121951.1| tripartite motif-containing protein 39 [Sus scrofa]
gi|56805544|dbj|BAD83393.1| tripartite motif-containing 39 [Sus scrofa]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|348550740|ref|XP_003461189.1| PREDICTED: tripartite motif-containing protein 39-like [Cavia
porcellus]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|417401799|gb|JAA47766.1| Putative e3 ubiquitin-protein ligase trim39 [Desmodus rotundus]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|351713103|gb|EHB16022.1| Tripartite motif-containing protein 39 [Heterocephalus glaber]
Length = 522
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|426250624|ref|XP_004019035.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39-like isoform 1
[Ovis aries]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|47087095|ref|NP_998727.1| E3 ubiquitin-protein ligase TRIM39 [Rattus norvegicus]
gi|56404683|sp|Q6MFZ5.1|TRI39_RAT RecName: Full=E3 ubiquitin-protein ligase TRIM39; AltName:
Full=RING finger protein 23; AltName: Full=Tripartite
motif-containing protein 39
gi|46237679|emb|CAE84052.1| tripartite motif-containing 39 [Rattus norvegicus]
gi|149029333|gb|EDL84593.1| tripartite motif protein 39, isoform CRA_a [Rattus norvegicus]
gi|149029334|gb|EDL84594.1| tripartite motif protein 39, isoform CRA_a [Rattus norvegicus]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|355748395|gb|EHH52878.1| hypothetical protein EGM_13408 [Macaca fascicularis]
Length = 539
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|197101585|ref|NP_001125160.1| tripartite motif-containing protein 39 [Pongo abelii]
gi|55727162|emb|CAH90337.1| hypothetical protein [Pongo abelii]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|312283723|ref|NP_001186048.1| TRIM39-RPP21 protein [Homo sapiens]
gi|397471690|ref|XP_003807419.1| PREDICTED: tripartite motif-containing protein 39-like isoform 4
[Pan paniscus]
Length = 503
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKV 61
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT 72
>gi|156373172|ref|XP_001629407.1| predicted protein [Nematostella vectensis]
gi|156216407|gb|EDO37344.1| predicted protein [Nematostella vectensis]
Length = 187
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI 67
FEC+ICL+ +DA+++ CGH FC C+ W++ + ++ CP+ + ++K+ +
Sbjct: 33 FECNICLDTARDAVISMCGHLFCWPCLHRWLETRPNRSMCPVCKAGISKEKV 84
>gi|67969808|dbj|BAE01252.1| unnamed protein product [Macaca fascicularis]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|30584093|gb|AAP36295.1| Homo sapiens tripartite motif-containing 39 [synthetic construct]
gi|60652933|gb|AAX29161.1| tripartite motif-containing 39 [synthetic construct]
gi|60652935|gb|AAX29162.1| tripartite motif-containing 39 [synthetic construct]
Length = 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|148228348|ref|NP_001086235.1| MGC84239 protein [Xenopus laevis]
gi|49258044|gb|AAH74361.1| MGC84239 protein [Xenopus laevis]
Length = 189
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + ++++ + I Y
Sbjct: 32 DSTFECNICLDNAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISREKV-IPLY 90
Query: 73 TR 74
R
Sbjct: 91 GR 92
>gi|395733534|ref|XP_002813562.2| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Pongo abelii]
Length = 1066
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKDDIFID 70
++DP +C++C + L+D + T CGH FCA C+ W+ +G CP L+ ++
Sbjct: 11 DVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGS--CPARCRGRLSAKELNHV 68
Query: 71 NYTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+R IL+ ++ C Y + C + + + H+ C
Sbjct: 69 LPLKRLILKLDIKCAYAARGCGQVVKLQQLPEHLERC 105
>gi|395533779|ref|XP_003768930.1| PREDICTED: tripartite motif-containing protein 39 [Sarcophilus
harrisii]
Length = 489
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKV 61
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 23 NLQVEASCSVCLEYLKEPVIIECGHNFCRACITRWWEELERDFPCPVCRKT 73
>gi|390461354|ref|XP_002746340.2| PREDICTED: tripartite motif-containing protein 39 [Callithrix
jacchus]
Length = 503
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKV 61
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT 72
>gi|402859583|ref|XP_003894231.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Papio anubis]
Length = 1066
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKDDIFID 70
++DP +C++C + L+D + T CGH FCA C+ W+ +G CP L+ ++
Sbjct: 11 DVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGS--CPAHCRGRLSAKELNHV 68
Query: 71 NYTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+R IL+ ++ C Y + C + + + H+ C
Sbjct: 69 LPLKRLILKLDIKCAYAARGCGRVVKLQQLPEHLERC 105
>gi|226342947|ref|NP_077788.2| E3 ubiquitin-protein ligase TRIM39 [Mus musculus]
gi|226342949|ref|NP_840065.1| E3 ubiquitin-protein ligase TRIM39 [Mus musculus]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|18202875|sp|Q9ESN2.1|TRI39_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM39; AltName:
Full=RING finger protein 23; AltName:
Full=Testis-abundant finger protein; AltName:
Full=Tripartite motif-containing protein 39
gi|10716078|dbj|BAB16375.1| testis-abundant finger protein [Mus musculus]
gi|148691342|gb|EDL23289.1| tripartite motif protein 39, isoform CRA_a [Mus musculus]
gi|148691343|gb|EDL23290.1| tripartite motif protein 39, isoform CRA_a [Mus musculus]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|444708279|gb|ELW49368.1| Tripartite motif-containing protein 39 [Tupaia chinensis]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|344307680|ref|XP_003422508.1| PREDICTED: tripartite motif-containing protein 39-like [Loxodonta
africana]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|344245311|gb|EGW01415.1| Tripartite motif-containing protein 39 [Cricetulus griseus]
Length = 453
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLTKDDIF-- 68
NL CS+CLEYLK+ ++ CGH FC CI W D++ CP+ K +++
Sbjct: 23 NLQVEANCSVCLEYLKEPVILECGHNFCKVCITRCWEDLEQDFPCPVCRKTSQYQNLWPN 82
Query: 69 --------IDNY---TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ 111
I Y R++ E NL +++ S L + E+ TC + ++Q
Sbjct: 83 RQLGSMVEIAKYLKRVRQKTREENLCFEHQEAMSLLCYEDQEAVCPTCAIYHTQ 136
>gi|141796066|gb|AAI34867.1| Zgc:162037 protein [Danio rerio]
Length = 548
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSW--IDVKGKNYCPIDEKVLTKDDIF 68
N D F CSICL+ LKD ++ SCGH+FC +CI D W D K CP + T
Sbjct: 5 NQDQEFSCSICLDLLKDPVILSCGHRFCMSCITDCWNLEDQKRVYSCPQCRQTFTPRPAL 64
Query: 69 IDNYTRREILE 79
N E+LE
Sbjct: 65 NKNVILTEMLE 75
>gi|426250626|ref|XP_004019036.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39-like isoform 2
[Ovis aries]
Length = 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|338718540|ref|XP_003363841.1| PREDICTED: tripartite motif-containing protein 39-like isoform 3
[Equus caballus]
Length = 503
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKV 61
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT 72
>gi|443689234|gb|ELT91681.1| hypothetical protein CAPTEDRAFT_148333 [Capitella teleta]
Length = 189
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
+EC+ICL+ +DA+++ CGH FC C+ W++ + + CP+ + ++KD + I Y R
Sbjct: 36 YECNICLDTARDAVISHCGHLFCWPCLHQWLETRPNRQVCPVCKAGISKDKV-IPLYGR 93
>gi|397489685|ref|XP_003815851.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Pan paniscus]
Length = 1123
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKDDIFID 70
++DP +C++C + L+D + T CGH FCA C+ W+ +G CP L+ ++
Sbjct: 108 DVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGS--CPARCRGRLSAKELNHV 165
Query: 71 NYTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+R IL+ ++ C Y + C + + + H+ C
Sbjct: 166 LPLKRLILKLDIKCAYAARGCGRVVKLQQLPEHLERC 202
>gi|354490641|ref|XP_003507465.1| PREDICTED: tripartite motif-containing protein 39-like
[Cricetulus griseus]
gi|344257177|gb|EGW13281.1| Tripartite motif-containing protein 39 [Cricetulus griseus]
Length = 488
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|115392097|ref|NP_001065263.1| E3 ubiquitin-protein ligase TRIM39 [Pan troglodytes]
gi|90960952|dbj|BAE92829.1| tripartite motif-containing 39 isoform 1 [Pan troglodytes]
Length = 518
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>gi|426352220|ref|XP_004043614.1| PREDICTED: E3 ubiquitin-protein ligase TRIM39 isoform 4 [Gorilla
gorilla gorilla]
gi|115311877|sp|Q1XHU0.1|TRI39_PANTR RecName: Full=E3 ubiquitin-protein ligase TRIM39; AltName:
Full=Tripartite motif-containing protein 39
gi|90960954|dbj|BAE92830.1| tripartite motif-containing 39 isoform 1 [Pan troglodytes]
Length = 518
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,234,398,321
Number of Sequences: 23463169
Number of extensions: 301604123
Number of successful extensions: 743508
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4575
Number of HSP's successfully gapped in prelim test: 8913
Number of HSP's that attempted gapping in prelim test: 730447
Number of HSP's gapped (non-prelim): 15742
length of query: 460
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 314
effective length of database: 8,933,572,693
effective search space: 2805141825602
effective search space used: 2805141825602
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)