BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7814
(460 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B5DF45|TRAF6_RAT TNF receptor-associated factor 6 OS=Rattus norvegicus GN=Traf6 PE=2
SV=1
Length = 530
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 207/489 (42%), Gaps = 89/489 (18%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC------------YLKYSQPSVEDITDS 120
+REIL + CP K C ++ + E H C + + Q + I D
Sbjct: 123 AKREILSLTVKCPNKGCVQKMELRHLEDHQVHCEFALVICPQCQRFFQKCQINKHIIEDC 182
Query: 121 P---TSSFRNTSGIPTNKRN----------------SKILTVTVFPEHLNMQGSSNENFP 161
P S +P ++ IL P H ++ + P
Sbjct: 183 PRRQVSCVNCAVPMPYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAP-VP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELL----FNKYCSDGSQSTNTPSHGRQDTS 217
C F GC E + L +H T H+ LL N S ++PS G
Sbjct: 242 CTFSVFGCHEKMQRNHL-ARHLQENTQLHMRLLAQAVHNVNLSLRPCDASSPSRG----- 295
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE--RMVL 275
+ DPN + K EG +LV + ++
Sbjct: 296 ----------------CRPEDPNYEETV--KQLEG--------------RLVRQDHQIRE 323
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + V+ + ++ E+ + + CNG+Y WK+ NF LK +E
Sbjct: 324 LTAKMETQSMHVSELKRTIRSLEDKVAEMEAQQCNGIYIWKIGNFGMHLKSQEEERPVVI 383
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L
Sbjct: 384 HSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTIL 443
Query: 391 NTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+ S + + + +F+RP N K FG+ F+ + + +G ++DD
Sbjct: 444 DQSEAVIRQNHEEVMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEAL---RQGTFIKDD 499
Query: 448 TFVIKTQVT 456
T +++ +V+
Sbjct: 500 TLLVRCEVS 508
>sp|P70196|TRAF6_MOUSE TNF receptor-associated factor 6 OS=Mus musculus GN=Traf6 PE=1 SV=2
Length = 530
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 202/488 (41%), Gaps = 87/488 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYL------------KYSQPSVEDITDS 120
+REIL + CP K C ++ + E H C + Q + I D
Sbjct: 123 AKREILSLTVKCPNKGCLQKMELRHLEDHQVHCEFALVNCPQCQRPFQKCQVNTHIIEDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K IL P H ++ + P
Sbjct: 183 PRRQVSCVNCAVSMAYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELL----FNKYCSDGSQSTNTPSHG-RQDT 216
C F GC E + L +H T H+ LL N + +PS G R +
Sbjct: 242 CTFSVFGCHEKMQRNHL-ARHLQENTQLHMRLLAQAVHNVNLALRPCDAASPSRGCRPED 300
Query: 217 SNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLL 276
N +E K+ ES+L D + E L
Sbjct: 301 PNYEET------IKQLESRLV------RQDHQIRE------------------------L 324
Query: 277 EQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FY 335
M Q + V + ++ E+ + + CNG+Y WK+ NF LK +E +
Sbjct: 325 TAKMETQSMYVGELKRTIRTLEDKVAEMEAQQCNGIYIWKIGNFGMHLKSQEEERPVVIH 384
Query: 336 SACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+
Sbjct: 385 SPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD 444
Query: 392 TSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDT 448
S + + + +F+RP N K FG+ F+ + + +G ++DDT
Sbjct: 445 QSEALIRQNHEEVMDAKPELLAFQRP-TIPRNPKGFGYVTFMHLEAL---RQGTFIKDDT 500
Query: 449 FVIKTQVT 456
+++ +V+
Sbjct: 501 LLVRCEVS 508
>sp|A7XUJ6|TRAF6_PIG TNF receptor-associated factor 6 OS=Sus scrofa GN=TRAF6 PE=2 SV=1
Length = 541
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 217/467 (46%), Gaps = 35/467 (7%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP C ++ + E H C + + P + +
Sbjct: 124 AKREILSLTVKCPNVGCLHKMELRHLEDHQAHCEFALMNCPQCQRPFQKCQLNIHILKEC 183
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + + V++ E ++ Q N C++ C V + + HYDL +
Sbjct: 184 PRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEY----CNTVLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ F+ + C + Q + H +++T + + A ++ + P ++ D
Sbjct: 239 APVPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMMAQALQGLS-LAVAPVPQRDMLPYD 297
Query: 248 KSSEGDCSCKTCGDNS--HLLKLVYERMVL-------LEQSMLEQKIKVNNFELNLKQTE 298
S S C D + ++ + R+V L M Q + V+ + ++ E
Sbjct: 298 SSPLSRISSGCCSDQNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRSLE 357
Query: 299 EIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRE 357
+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 358 DKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLP 417
Query: 358 DAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFD 409
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE I +EI K
Sbjct: 418 TAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPIRQNHEEIMDAKPELL 476
Query: 410 SFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + D L R F+ +DDT +++ +V+
Sbjct: 477 AFQRPT-IPRNPKGFGYVTFMHL-DALR-QRTFI-KDDTLLVRCEVS 519
>sp|Q3ZCC3|TRAF6_BOVIN TNF receptor-associated factor 6 OS=Bos taurus GN=TRAF6 PE=2 SV=1
Length = 542
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 218/469 (46%), Gaps = 38/469 (8%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + S P + +
Sbjct: 124 AKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHILKEC 183
Query: 132 PTNKRNSKILTVTVFPE--HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLK-TS 188
P + + V++ E ++ Q N C++ C + + + HYDL +
Sbjct: 184 PRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEY----CNTMLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN--------KEHESKLWD- 238
+ F+ + C + Q + H +++T + + A ++ + L+D
Sbjct: 239 APVPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDS 298
Query: 239 --PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQ 296
P + +G + SE +T L ++ L M Q + VN + ++
Sbjct: 299 VPPTRPSSG--RHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRT 356
Query: 297 TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNIS 355
E+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 357 LEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQ 416
Query: 356 REDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-N 407
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE ++ +EI K
Sbjct: 417 LPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAAVRQNHEEIMDAKPE 475
Query: 408 FDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 476 LLAFQRP-TIPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 520
>sp|Q6DJN2|TRF6B_XENLA TNF receptor-associated factor 6-B OS=Xenopus laevis GN=traf6-b
PE=2 SV=1
Length = 556
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 209/488 (42%), Gaps = 74/488 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI + G CP+D ++L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIVKSLRDAGHK-CPVDNEILMENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLK----------YSQPSVEDITDSPT 122
+REIL + CP + C+ + + E H+ C + + +E +
Sbjct: 125 AKREILSLKVKCPSQGCTETMELRHLERHLGQCQFASVECSQCQGSFPKSRLEKHMEHEC 184
Query: 123 S-------------SFRNTSG--------IPTNKRNSKILTVTVFPEHLNMQGSSNENFP 161
++ + SG T + L P H +M + P
Sbjct: 185 GRRKIFCDNCGLAMAYEDMSGHELICPLAYVTCEYCQTNLIREQMPSHYSMD-CTMAPIP 243
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTS---- 217
C +Y+ GC E + L +H T H+ ++F S + TP+ D S
Sbjct: 244 CMYYEFGCTEKMQRNDL-ARHLQDFTQAHMRMMFQTLRS----FSTTPTSHISDISFCDP 298
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLE 277
NQ E L H S + S DCS +T + ++ + R+V +
Sbjct: 299 NQFE-PVPLSVAPAHPSHM------------PSHQDCSQET-RNLRETIEQLEGRLVRQD 344
Query: 278 QSMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+ E Q VN + ++ E+ +V CNGV+ WK+ F K +E
Sbjct: 345 HQIRELIAKMETQCTYVNELKHTIRSLEDKLLDVDGHHCNGVFIWKIKGFSGLQKTQEEE 404
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRI 385
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L WP G I
Sbjct: 405 KPVVIHSPGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLHGTI 464
Query: 386 RFTALNTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGF 442
R + L+ S I D+ + + + +F+RP N K FG+ F+ + + R +
Sbjct: 465 RLSILDQSEGAIIQDQEEVMDTKPDLLAFQRPTT-QRNPKGFGYVTFMHLNTLKQ--RQY 521
Query: 443 LMEDDTFV 450
+ D FV
Sbjct: 522 VKNDTLFV 529
>sp|Q28DL4|TRAF6_XENTR TNF receptor-associated factor 6 OS=Xenopus tropicalis GN=traf6
PE=2 SV=1
Length = 558
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 221/500 (44%), Gaps = 85/500 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D + L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHK-CPVDNESLMENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-------------YLKYSQ-------- 111
+REIL + CP + C+ + + E H+ C + KYS
Sbjct: 125 AKREILSLRVKCPSQGCTETMELRHLERHLVRCDFAGVECSQCQSSFPKYSLQKHKFEEC 184
Query: 112 PSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTV-----------FPEHLNMQGSSNENF 160
P + ++ + + + + + VT P H +M +
Sbjct: 185 PRRQIFCENCAVAMALEDKL-NHDQTCPLAYVTCEYCQTNLIREQMPAHYSMD-CTMAPI 242
Query: 161 PCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQK 220
PC +Y+ GC E + L +H T H+ ++ +Q+ + S TS+
Sbjct: 243 PCMYYEFGCTEKMQRNDL-ARHLQEFTQAHMRMM--------AQTLRSFSSSVTPTSHMP 293
Query: 221 EIEAYLMKNKEHESKLWDPNKNQAGDDK---------SSEGDCSCKTCGDNSHLLKLVYE 271
+I DP++ + S+ DC+ +T + ++ +
Sbjct: 294 DI------------SFCDPSQFEPAPPSVATVHSTHTPSQNDCTQET-RNLRETIEQLEG 340
Query: 272 RMVLLEQSMLEQKIKVNN---FELNLKQTEEIEDNVVLKL----CNGVYFWKMYNFPAKL 324
R+V + + E K+ + LK T DN + ++ C+G++ W++ NF + L
Sbjct: 341 RLVRQDHQIRELIAKMETQCTYVNELKHTIRSLDNRLGEMESQQCSGIFIWRINNFNSLL 400
Query: 325 KEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDW 379
K +E +S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L W
Sbjct: 401 KNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPW 460
Query: 380 PFVGRIRFTALNTSSEFSITDE---IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
P G IR + L+ S ++ D+ + + +F+RP N K FG+ F+ + +
Sbjct: 461 PLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPT-VARNPKGFGYVTFMHLQALK 519
Query: 437 DPGRGFLMEDDTFVIKTQVT 456
R ++ ++DT +++ VT
Sbjct: 520 Q--RQYV-KNDTLLVRCSVT 536
>sp|B6CJY4|TRAF6_CERAT TNF receptor-associated factor 6 OS=Cercocebus atys GN=TRAF6 PE=2
SV=1
Length = 522
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 210/484 (43%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDC 182
Query: 121 PTS--SFRNTSGIPT------NKRNSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S N + + + +N + V P H ++ + P
Sbjct: 183 PRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-LIPDSGYVSE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSTYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K + +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPDLLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>sp|B6CJY5|TRAF6_MACMU TNF receptor-associated factor 6 OS=Macaca mulatta GN=TRAF6 PE=2
SV=1
Length = 522
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 210/484 (43%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDC 182
Query: 121 PTS--SFRNTSGIPT------NKRNSKILTVTV-----------FPEHLNMQGSSNENFP 161
P S N + + + +N + V P H ++ + P
Sbjct: 183 PRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-LIPDSGYVSE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSTYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K + +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPDLLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>sp|Q9Y4K3|TRAF6_HUMAN TNF receptor-associated factor 6 OS=Homo sapiens GN=TRAF6 PE=1 SV=1
Length = 522
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 205/484 (42%), Gaps = 87/484 (17%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G + CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAG-HKCPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY------SQP------SVEDITDS 120
+REIL + CP + C ++ + E H C +P ++ + D
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDC 182
Query: 121 PTSSFRNTSGIPTNKRNSK-------------------ILTVTVFPEHLNMQGSSNENFP 161
P + + K IL P H ++ + P
Sbjct: 183 PRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAP-IP 241
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GC E + L +H T H+ +L +Q+ ++ S D+ E
Sbjct: 242 CTFSTFGCHEKMQRNH-LARHLQENTQSHMRML--------AQAVHSLS-VIPDSGYISE 291
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ + + E +L H ++ + +M +
Sbjct: 292 VRNFQETIHQLEGRLV-----------------------RQDHQIRELTAKMETQSMYVS 328
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFY 340
E K + E + + E + CNG+Y WK+ NF LK + +E +S FY
Sbjct: 329 ELKRTIRTLEDKVAEIEA-------QQCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFY 381
Query: 341 SSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR T L+ SE
Sbjct: 382 TGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEA 440
Query: 397 SIT---DEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
+ +EI K +F+RP N K FG+ F+ + + R F+ +DDT +++
Sbjct: 441 PVRQNHEEIMDAKPELLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVR 496
Query: 453 TQVT 456
+V+
Sbjct: 497 CEVS 500
>sp|Q6IWL4|TRAF6_DANRE TNF receptor-associated factor 6 OS=Danio rerio GN=traf6 PE=2 SV=2
Length = 542
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 201/490 (41%), Gaps = 79/490 (16%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ T CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 65 LESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQK-CPVDNEVLLEEQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY-------------------SQPS 113
+REIL + C CS ++ + + E H++ C SQ
Sbjct: 124 AKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFATAPCPQCQESVPISHLDEHKSQHC 183
Query: 114 VEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNE------------NFP 161
++ I P + + N TV E+ M+ ++
Sbjct: 184 LQRIMTCPDCAGSFVYAVKQNHEQFCPFANTVC-EYCEMELIRDQLALHCDTDCLKAPVA 242
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C F GCRE ++ L +H T H+ + S + PS +S+ +
Sbjct: 243 CTFSTFGCREKM-TRNELAQHMQEFTQMHMRYMAEFLRSQTLNNCTMPSAAAHLSSDDR- 300
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE---RMVLLEQ 278
G S C CK + +L + V E R+V +Q
Sbjct: 301 -----------------------GASARSPDSCQCKQ--ELLNLRETVLELEGRLVRQDQ 335
Query: 279 SMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEIN 331
+ E QK +V L EE + + G+Y W++ NF L+ +
Sbjct: 336 QIRELCIHNDTQKNQVTELRRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRNQEAGQ 395
Query: 332 R-YFYSACFYSSCFGYRFCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIR 386
+S FY+ GY+ C R+++ A ++SLF+H +QGE D L WP G IR
Sbjct: 396 PIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIR 455
Query: 387 FTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMED 446
L+ + +++ + +F+RP N K FG+ F+ + + RGF+ E
Sbjct: 456 LAVLDQVEGQHHIEVMETKPDLQAFQRP-TVMRNPKGFGYVTFLHLQALRQ--RGFVKE- 511
Query: 447 DTFVIKTQVT 456
D +++ +VT
Sbjct: 512 DVLLVRCEVT 521
>sp|Q3MV19|TRF6A_XENLA TNF receptor-associated factor 6-A OS=Xenopus laevis GN=traf6-a
PE=1 SV=1
Length = 556
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 214/493 (43%), Gaps = 75/493 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI + G + CP+D ++L + +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAG-HKCPVDNEILMEKQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-------------YLKYSQPSVEDITD 119
+REIL + CP C+ + + E H+ C +LK +
Sbjct: 125 AKREILSLRVKCPNLGCTDTMELRHLEHHLVQCQFASVECSQCQGSFLKLLLDKHMEHEC 184
Query: 120 SPTSSFRNTSGIPT---NKRNSKILTVTVF---------------PEHLNMQGSSNENFP 161
+F + G+ +K +++ + P H +M + P
Sbjct: 185 GRRRTFCDNCGLAMAYEDKSGHELICPMAYVTCDYCQTNLIREQMPAHYSMD-CTMAPIP 243
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTS---- 217
C + + GCRE + L D T H+ ++ S + TP+ D S
Sbjct: 244 CMYCEFGCREKMQRHNLAGHLQDF-TQAHMRMMAQTLRS----FSTTPTSHISDISFCDP 298
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLE 277
NQ E L H S + S+ DCS +T + ++ + R+V +
Sbjct: 299 NQFE-PVPLSVAPAHPSHM------------PSQQDCSQET-RNLRETVEQLEGRLVRQD 344
Query: 278 QSMLE-------QKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+ E Q VN + + E+ ++ CNGV+ W++ F K +E
Sbjct: 345 HQIRELIAKMETQCTYVNELKHTIHSLEDKVADMDAHRCNGVFIWRIKGFSGLQKSQEEE 404
Query: 331 NR-YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRI 385
+S FY+ GY+ C R+++ AQ Y+SLF+H +QG+ D +L WP G I
Sbjct: 405 KPVVIHSPGFYTGDPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGDYDSLLPWPLQGTI 464
Query: 386 RFTALNTSSEFSITDEIQ---SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGF 442
R + L+ S + D+++ + + +F+RP N K FG+ F+ + + R +
Sbjct: 465 RLSILDQSESTARQDQVEVMDTKPDLLAFQRPTA-PRNPKGFGYVTFMHLNTLKQ--RQY 521
Query: 443 LMEDDTFVIKTQV 455
+ ++DT +++ V
Sbjct: 522 V-KNDTLLVRCSV 533
>sp|O00463|TRAF5_HUMAN TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2
Length = 557
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 223/518 (43%), Gaps = 82/518 (15%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITD-----------S 120
+RE+L + C C++++ + Y+ H+ C + Q S E + S
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLS 158
Query: 121 PTSSFRNTSG-------IPTNKRN-----------------SKILTVTVFPEHLNMQGSS 156
+ FR + N +N +KI+ T EHL + +
Sbjct: 159 ASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEA 218
Query: 157 NENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDT 216
++ P K Y GC V + L++H H+ L+ K Q ++ Q
Sbjct: 219 EQDCPFKHY--GC-AVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQISDLHKSLEQKE 275
Query: 217 SNQKEIEAYLMKNKEHE----SKLWDPNKNQAGDDK--SSEGDCSCKTCGDNSHLLKLV- 269
S +++ A +K E E ++L+ N + + + +S D S LL++V
Sbjct: 276 SKIQQL-AETIKKLEKEFKQFAQLFGKNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVN 334
Query: 270 ------------------YERMVLLEQ-----SMLEQKIKVNNFELNLKQTEEIEDNVVL 306
+++ LLE ++LE++ ++ +N+ + + ++
Sbjct: 335 QQQNKFDLRPLMEAVDTVKQKITLLENNDQRLAVLEEETNKHDTHINIHKAQLSKNEERF 394
Query: 307 KLC-----NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA- 359
KL NG WK+ ++ K +E + + +S FY+S GYR C R ++ + +
Sbjct: 395 KLLEGTCYNGKLIWKVTDYKMKKREAVDGHTVSIFSQSFYTSRCGYRLCARAYLNGDGSG 454
Query: 360 --QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNF 417
+LSL+ +++GE D +L WPF R+ L+ S + +I + + D N SFKRP
Sbjct: 455 RGSHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGE 514
Query: 418 FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
A G F+ VL+ + ++DDT +K V
Sbjct: 515 M--NIASGCPRFV-AHSVLENAKNAYIKDDTLFLKVAV 549
>sp|Q12933|TRAF2_HUMAN TNF receptor-associated factor 2 OS=Homo sapiens GN=TRAF2 PE=1 SV=2
Length = 501
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 183/459 (39%), Gaps = 78/459 (16%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK--------VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N + +L
Sbjct: 27 KLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ-PSVEDIT--- 118
F DN RRE+ CP C+ + ++ EYES H C L ++ P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTECPACKGLVRLG 146
Query: 119 --------DSPTSSF--RNTSG------------------IPTNKRNSKILTVTVFPEHL 150
+ P S R+ + + K + F +H+
Sbjct: 147 EKERHLEHECPERSLSCRHCRAPCCGADVKAHHEVCPKFPLTCDGCGKKKIPREKFQDHV 206
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQA-------LLEKHYDLKTSFHLEL--LFNKYCSD 201
G PC+F+ +GC E + + L +H + S LE L
Sbjct: 207 KTCGKCR--VPCRFHAIGCLETVEGEKQQEHEVQWLREHLAMLLSSVLEAKPLLGDQSHA 264
Query: 202 GSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGD 261
GS+ + T+ + I L + E + + Q D+
Sbjct: 265 GSELLQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDK----------- 313
Query: 262 NSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFP 321
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F
Sbjct: 314 ----IEALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFA 362
Query: 322 AKLKEMKEIN-RYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDIL 377
K +E +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 363 RKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALL 422
Query: 378 DWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
WPF ++ L+ ++ + D + D SF+RPVN
Sbjct: 423 RWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVN 461
>sp|P39429|TRAF2_MOUSE TNF receptor-associated factor 2 OS=Mus musculus GN=Traf2 PE=1 SV=1
Length = 501
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 192/455 (42%), Gaps = 70/455 (15%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-----YCPIDEK---VLT 63
L+ ++ CS C L+ CGH++C+ C+ S + +N Y + E+ +L
Sbjct: 27 RLEAKYLCSACKNILRRPFQAQCGHRYCSFCLTSILSSGPQNCAACVYEGLYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC-YLKYSQPSVEDITDSP 121
F DN RRE+ CP C+ + ++ EYES H C +L P+ + +
Sbjct: 87 SSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFLLTECPACKGLVRLS 146
Query: 122 TSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQ--------------GSSNENFP------ 161
P KR+ H++++ G + P
Sbjct: 147 EKEHHTEQECP--KRSLSCQHCRAPCSHVDLEVHYEVCPKFPLTCDGCGKKKIPRETFQD 204
Query: 162 -----------CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPS 210
C+F+ VGC E+ +++ L + H + HL LL + + ++ +P
Sbjct: 205 HVRACSKCRVLCRFHTVGCSEMVETENL-QDHELQRLREHLALLLSSF----LEAQASPG 259
Query: 211 HGRQDTSNQKEIEAYLMKNKEHESKLWD-PNKNQAGDDKSSEGDCSCKTCGDNSHL---- 265
T NQ E L + + E K+ N + + + + C L
Sbjct: 260 -----TLNQVGPE-LLQRCQILEQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDK 313
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK 325
++ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +
Sbjct: 314 IEALSNKVQQLERSIGLKDLAMADLE---QKVSELEVSTY----DGVFIWKISDFTRKRQ 366
Query: 326 E-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPF 381
E + +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF
Sbjct: 367 EAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPF 426
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVN 416
++ L+ ++ + D + D SF+RPV+
Sbjct: 427 NQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVS 461
>sp|Q61382|TRAF4_MOUSE TNF receptor-associated factor 4 OS=Mus musculus GN=Traf4 PE=1 SV=2
Length = 470
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 190/483 (39%), Gaps = 87/483 (18%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+NTC +P
Sbjct: 74 VQVLGLAIRCIHSEEGCRWSGPLRHLQGHLNTCSFNV---------------------VP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDL--KTSFH 190
R L+ P HL C+F GC F +A E H + + S +
Sbjct: 113 CPNRCPAKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCD--FSGEAY-ESHEGVCPQESVY 166
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN------KEHE---SKLWDPNK 241
E NK C H + + + AY K + H+ +L P
Sbjct: 167 CE---NK-CGARMMRRLLAQHATSECPKRTQPCAYCTKEFVYDTIQSHQYQCPRLPVPCP 222
Query: 242 NQAGDDKSSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------M 280
NQ G + D C K G KL R V E+S M
Sbjct: 223 NQCGVGTVAREDLPTHLKDSCSTAFVLCPFKESGCKHRCPKLAMGRHV--EESVKPHLAM 280
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACF 339
+ + EL + E+E+ + +GV WK+ ++ +L+E K + N +S F
Sbjct: 281 MCALVSRQRQELQ-ELRRELEELSIGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAF 337
Query: 340 YSSCFGYRFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+ +GY+ + + +LS++I ++ G D++L+WPF R+ F+ L+ S
Sbjct: 338 YTHKYGYKLQVSAFLNGNGSGEGTHLSIYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPG 397
Query: 397 -----SITDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDD 447
+T+ D N+ +F++P + + FG+ FI D+ R ++ +D
Sbjct: 398 LAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDA 455
Query: 448 TFV 450
F+
Sbjct: 456 VFI 458
>sp|P39428|TRAF1_MOUSE TNF receptor-associated factor 1 OS=Mus musculus GN=Traf1 PE=1 SV=2
Length = 409
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 218 DREHILSL-EQRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 269
Query: 321 PAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E + +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D +
Sbjct: 270 TKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDAL 329
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 330 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 387
Query: 437 DPGRGFLMEDDTFVIKTQV 455
P + ++DDT +K V
Sbjct: 388 SPKHAY-VKDDTMFLKCIV 405
>sp|Q9BUZ4|TRAF4_HUMAN TNF receptor-associated factor 4 OS=Homo sapiens GN=TRAF4 PE=1 SV=1
Length = 470
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 188/476 (39%), Gaps = 73/476 (15%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
++L + C + + + S P + H+N T SF + IP
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLN------------------TCSF---NVIP 112
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC---REVFKSQALLEKHYDLKTSF 189
R L+ P HL C+F GC E ++S + +
Sbjct: 113 CPNRCPMKLSRRDLPAHLQ-HDCPKRRLKCEF--CGCDFSGEAYESHEGMCPQESVYCEN 169
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE-SKLWDPNKNQAGDDK 248
+ ++ P + T KE +++ +++ +L NQ G
Sbjct: 170 KCGARMMRRLLAQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGT 229
Query: 249 SSEGD---------------CSCKTCGDNSHLLKLVYERMVLLEQS------MLEQKIKV 287
+ D C K G KL R V E+S M+ +
Sbjct: 230 VAREDLPGHLKDSCNTALVLCPFKDSGCKHRCPKLAMARHV--EESVKPHLAMMCALVSR 287
Query: 288 NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGY 346
EL + E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY
Sbjct: 288 QRQELQ-ELRRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGY 344
Query: 347 RFCTRVNI---SREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SI 398
+ + + +LSL+I ++ G D++L+WPF R+ F+ L+ S +
Sbjct: 345 KLQVSAFLNGNGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHV 404
Query: 399 TDEIQSDKNFDSFKRPVNFFL----NKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
T+ D N+ +F++P + + FG+ FI D+ R ++ +D F+
Sbjct: 405 TETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
>sp|Q13077|TRAF1_HUMAN TNF receptor-associated factor 1 OS=Homo sapiens GN=TRAF1 PE=1 SV=1
Length = 416
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSL-EQRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDI 376
+ E +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +
Sbjct: 277 TRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDAL 336
Query: 377 LDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVL 436
L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 337 LPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKLQ 394
Query: 437 DPGRGFLMEDDTFVIKTQVTEMT 459
P + ++DDT +K V T
Sbjct: 395 SPKHAY-VKDDTMFLKCIVETST 416
>sp|P70191|TRAF5_MOUSE TNF receptor-associated factor 5 OS=Mus musculus GN=Traf5 PE=1 SV=1
Length = 558
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+VLLE + +N + L + EE + +G WK+ ++ K +E E
Sbjct: 364 QRLVLLEGETSKHDAHINIHKAQLNKNEERFKQLEGACYSGKLIWKVTDYRVKKREAVEG 423
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 424 HTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVT 483
Query: 387 FTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ S + + I + ++D N SFKRP A G F+ L+ + ++
Sbjct: 484 LMLLDQSGKKNHIVETFKADPNSSSFKRPDGEM--NIASGCPRFVS-HSTLENSKNTYIK 540
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 541 DDTLFLKVAV 550
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQQCIRSLRELNSVPICPVDKEVIKPQEVFKDNC 98
Query: 73 TRREILENNLTCP-YKQCSSQLSIPEYESHVNTC 105
+RE+L ++ C C++++ + ++ H+ C
Sbjct: 99 CKREVLNLHVYCKNAPGCNARIILGRFQDHLQHC 132
>sp|Q13114|TRAF3_HUMAN TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2
Length = 568
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 415 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 474
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 475 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 532
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 533 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDN 104
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL + H+ N C+ +
Sbjct: 105 CCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFE 144
>sp|Q60803|TRAF3_MOUSE TNF receptor-associated factor 3 OS=Mus musculus GN=Traf3 PE=1 SV=2
Length = 567
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 310 NGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLF 365
NGV WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF
Sbjct: 414 NGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLF 473
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAF 424
+++GE D +L WPF ++ ++ SS + D + D N SFK+P A
Sbjct: 474 FVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEM--NIAS 531
Query: 425 GFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 532 GCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 45 TVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDN 103
Query: 72 YTRREILENNLTC--PYKQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 104 CCKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNEC 140
>sp|Q09463|RNF5_CAEEL RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1
SV=1
Length = 235
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 4 QPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVL 62
+P +++ + RFEC+ICL+ KDA+++ CGH FC C+ W+D + N CP+ + +
Sbjct: 11 EPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAI 70
Query: 63 TKDDIFIDNYTR 74
+ + + Y R
Sbjct: 71 DGNKV-VPIYGR 81
>sp|Q5ZIR9|RN185_CHICK E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus GN=RNF185
PE=2 SV=1
Length = 194
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKD 65
A + N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D
Sbjct: 29 AGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 88
Query: 66 DIFIDNYTR 74
+ I Y R
Sbjct: 89 KV-IPLYGR 96
>sp|Q6ZMN7|PZRN4_HUMAN PDZ domain-containing RING finger protein 4 OS=Homo sapiens
GN=PDZRN4 PE=1 SV=3
Length = 1036
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP EC +C + L++ + T CGH FCA+C+ W + CP+ + L +++
Sbjct: 12 VDPALECKLCGQVLEEPLCTPCGHVFCASCLLPW--AVRRRRCPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R I + + C Y+ C + + E E+HV C
Sbjct: 70 LRSLIQKLRVQCDYRARGCGHSVRLHELEAHVEHC 104
>sp|Q91YT2|RN185_MOUSE E3 ubiquitin-protein ligase RNF185 OS=Mus musculus GN=Rnf185 PE=2
SV=1
Length = 192
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>sp|Q568Y3|RN185_RAT E3 ubiquitin-protein ligase RNF185 OS=Rattus norvegicus GN=Rnf185
PE=2 SV=1
Length = 192
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>sp|Q96GF1|RN185_HUMAN E3 ubiquitin-protein ligase RNF185 OS=Homo sapiens GN=RNF185 PE=1
SV=1
Length = 192
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>sp|Q5RFK9|RN185_PONAB E3 ubiquitin-protein ligase RNF185 OS=Pongo abelii GN=RNF185 PE=2
SV=1
Length = 192
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>sp|Q6PC78|RN185_DANRE E3 ubiquitin-protein ligase RNF185 OS=Danio rerio GN=rnf185 PE=2
SV=1
Length = 194
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 36 DSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 94
Query: 73 TR 74
R
Sbjct: 95 GR 96
>sp|Q6MFZ5|TRI39_RAT E3 ubiquitin-protein ligase TRIM39 OS=Rattus norvegicus GN=Trim39
PE=2 SV=1
Length = 488
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>sp|Q9ESN2|TRI39_MOUSE E3 ubiquitin-protein ligase TRIM39 OS=Mus musculus GN=Trim39 PE=2
SV=1
Length = 488
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>sp|Q1XHU0|TRI39_PANTR E3 ubiquitin-protein ligase TRIM39 OS=Pan troglodytes GN=TRIM39
PE=3 SV=1
Length = 518
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>sp|Q9HCM9|TRI39_HUMAN E3 ubiquitin-protein ligase TRIM39 OS=Homo sapiens GN=TRIM39 PE=1
SV=2
Length = 518
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPV 68
>sp|Q9UPQ7|PZRN3_HUMAN E3 ubiquitin-protein ligase PDZRN3 OS=Homo sapiens GN=PDZRN3 PE=1
SV=2
Length = 1066
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKDDIFID 70
++DP +C++C + L+D + T CGH FCA C+ W+ +G CP L+ ++
Sbjct: 11 DVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGS--CPARCRGRLSAKELNHV 68
Query: 71 NYTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+R IL+ ++ C Y + C + + + H+ C
Sbjct: 69 LPLKRLILKLDIKCAYATRGCGRVVKLQQLPEHLERC 105
>sp|A6NK02|TRI75_HUMAN Putative tripartite motif-containing protein 75 OS=Homo sapiens
GN=TRIM75 PE=5 SV=2
Length = 468
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCPI 57
VA L +CSICL+YL D + CGH FC +CI SW+D++ CP+
Sbjct: 3 VAAALTGLQAEAKCSICLDYLSDPVTIECGHNFCRSCIQQSWLDLQELFPCPV 55
>sp|Q69ZS0|PZRN3_MOUSE E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus GN=Pdzrn3 PE=1
SV=3
Length = 1063
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKDDIFID 70
++DP +C++C + L+D + T CGH FCA C+ W+ +G CP L+ ++
Sbjct: 11 DVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGS--CPARCRGRLSAKELNHV 68
Query: 71 NYTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+R IL+ ++ C + + C + + + H+ C
Sbjct: 69 LPLKRLILKLDIKCAHAARGCGRVVKLQDLPEHLERC 105
>sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2
SV=1
Length = 672
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIF 68
+LD F C IC++ +KDA LT+CGH FC CI + + + K+ CP LT ++F
Sbjct: 40 DLDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHL--RNKSDCPCCGHYLTNSNLF 94
>sp|Q495X7|TRI60_HUMAN Tripartite motif-containing protein 60 OS=Homo sapiens GN=TRIM60
PE=2 SV=2
Length = 471
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACID-SWIDVKGKNYCPI 57
+NL C ICLEYLKD + +CGH FC +C+ SW D+ CP+
Sbjct: 8 VNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPV 55
>sp|Q6J1I7|RN166_RAT RING finger protein 166 OS=Rattus norvegicus GN=Rnf166 PE=2 SV=1
Length = 237
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 7 ANNKLNLDPRFECSICLE-YLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD 65
A L+ +F C ICLE Y + + SCGH FC C+ + V CP+ L D
Sbjct: 21 AGGDSGLEAQFSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSP-LCPLCR--LPFD 77
Query: 66 DIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+D T E ++ P + C+ ++++ + +H+++C
Sbjct: 78 PKKVDKATHVEKQLSSYKAPCRGCNKKVTLAKMRAHISSC 117
>sp|Q3U9F6|RN166_MOUSE RING finger protein 166 OS=Mus musculus GN=Rnf166 PE=2 SV=1
Length = 237
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 7 ANNKLNLDPRFECSICLE-YLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD 65
A L+ +F C ICLE Y + + SCGH FC C+ + V CP+ L D
Sbjct: 21 AGGDSGLEAQFSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSP-LCPLCR--LPFD 77
Query: 66 DIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+D T E ++ P + C+ ++++ + +H+++C
Sbjct: 78 PKKVDKATHVEKQLSSYKAPCRGCNKKVTLAKMRAHISSC 117
>sp|Q99942|RNF5_HUMAN E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1
SV=1
Length = 180
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ + + Y R
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKV-VPLYGR 82
>sp|Q5M807|RNF5_RAT E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5
PE=2 SV=1
Length = 180
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ + + Y R
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKV-VPLYGR 82
>sp|O35445|RNF5_MOUSE E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1
SV=1
Length = 180
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ + + Y R
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKV-VPLYGR 82
>sp|P68907|PZRN3_RAT E3 ubiquitin-protein ligase PDZRN3 OS=Rattus norvegicus GN=Pdzrn3
PE=1 SV=1
Length = 1062
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID-EKVLTKDDIFIDN 71
+DP +C++C + L+D + T CGH FCA C+ W+ +G CP L+ ++
Sbjct: 12 VDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGS--CPSRCRGRLSAKELNHVL 69
Query: 72 YTRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+R IL+ ++ C + + C + + + H+ C
Sbjct: 70 PLKRLILKLDIKCAHAARGCGRVVKLQDLPEHLERC 105
>sp|O77666|TRI26_PIG Tripartite motif-containing protein 26 OS=Sus scrofa GN=TRIM26
PE=3 SV=2
Length = 545
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C V G+ CP+ +K TK++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENI 65
>sp|Q9D9R0|RN125_MOUSE E3 ubiquitin-protein ligase RNF125 OS=Mus musculus GN=Rnf125 PE=2
SV=3
Length = 233
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
F+CS+CLE L + T CGH FC +CI + I K CP L + + + +R
Sbjct: 35 FDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYLPSEGVPATDIAKRM 94
Query: 77 ILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVE 115
E C +C + + + + +H+ TC Y+ P +E
Sbjct: 95 KSEYQ-NC--AECGTLVCLSDMRAHIRTCEKYIDKYGPLLE 132
>sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1
PE=1 SV=2
Length = 675
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIF 68
+LD C IC++ +KDA LT+CGH FC CI + + + K+ CP + LT + ++
Sbjct: 45 DLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHL--RNKSDCPCCSQHLTNNQLY 99
>sp|Q61510|TRI25_MOUSE E3 ubiquitin/ISG15 ligase TRIM25 OS=Mus musculus GN=Trim25 PE=2
SV=2
Length = 634
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACID-SWIDVKGKNY-CPIDEKV 61
L CS+CLE K+ + T CGH FC +C+D +W+ V+G Y CP KV
Sbjct: 7 LAEELSCSVCLELFKEPVTTPCGHNFCMSCLDETWV-VQGPPYRCPQCRKV 56
>sp|Q6CTZ8|RAD18_KLULA Postreplication repair E3 ubiquitin-protein ligase RAD18
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RAD18
PE=3 SV=1
Length = 427
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI 57
+LD C IC ++LK ++LT CGH FC+ CI ++ + K CP+
Sbjct: 25 DLDSLLRCHICKDFLKASVLTPCGHSFCSICIRKYLQKESK--CPL 68
>sp|O64425|RMA1_ARATH E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana GN=RMA1
PE=1 SV=1
Length = 249
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK 50
D F+C+ICL+ +++ ++T CGH FC CI W+DV+
Sbjct: 43 DSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQ 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 174,378,910
Number of Sequences: 539616
Number of extensions: 7358809
Number of successful extensions: 18582
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 17966
Number of HSP's gapped (non-prelim): 839
length of query: 460
length of database: 191,569,459
effective HSP length: 121
effective length of query: 339
effective length of database: 126,275,923
effective search space: 42807537897
effective search space used: 42807537897
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)