Your job contains 1 sequence.
>psy7814
MEHQPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK
VLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDS
PTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLE
KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPN
KNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEI
EDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ
YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLN
KKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMTH
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7814
(460 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A7XUJ6 - symbol:TRAF6 "TNF receptor-associated ... 429 2.6e-40 1
RGD|1306853 - symbol:Traf6 "TNF receptor-associated facto... 416 6.1e-39 1
MGI|MGI:108072 - symbol:Traf6 "TNF receptor-associated fa... 415 7.8e-39 1
UNIPROTKB|Q3ZCC3 - symbol:TRAF6 "TNF receptor-associated ... 408 4.3e-38 1
UNIPROTKB|B6CJY4 - symbol:TRAF6 "TNF receptor-associated ... 395 1.0e-36 1
UNIPROTKB|B6CJY5 - symbol:TRAF6 "TNF receptor-associated ... 395 1.0e-36 1
UNIPROTKB|Q9Y4K3 - symbol:TRAF6 "TNF receptor-associated ... 389 4.4e-36 1
UNIPROTKB|Q6DJN2 - symbol:traf6-b "TNF receptor-associate... 236 1.9e-34 2
UNIPROTKB|Q28DL4 - symbol:traf6 "TNF receptor-associated ... 242 2.0e-34 2
UNIPROTKB|Q3MV19 - symbol:traf6-a "TNF receptor-associate... 222 7.3e-32 2
UNIPROTKB|E1C626 - symbol:TRAF6 "Uncharacterized protein"... 224 1.7e-31 2
UNIPROTKB|E2RDE8 - symbol:TRAF6 "Uncharacterized protein"... 204 7.3e-30 2
UNIPROTKB|O00463 - symbol:TRAF5 "TNF receptor-associated ... 205 9.8e-29 2
MGI|MGI:107548 - symbol:Traf5 "TNF receptor-associated fa... 192 1.8e-25 2
UNIPROTKB|J9P706 - symbol:TRAF5 "Uncharacterized protein"... 187 2.6e-25 3
UNIPROTKB|I3L7X2 - symbol:TRAF5 "Uncharacterized protein"... 187 3.3e-25 2
UNIPROTKB|F5H1P7 - symbol:TRAF5 "TNF receptor-associated ... 205 5.8e-25 2
UNIPROTKB|E2RR95 - symbol:TRAF5 "Uncharacterized protein"... 187 3.2e-23 2
UNIPROTKB|E1BTY1 - symbol:TRAF2 "Uncharacterized protein"... 220 1.6e-22 2
UNIPROTKB|E1B9D9 - symbol:TRAF2 "Uncharacterized protein"... 209 1.6e-22 2
UNIPROTKB|F6XG92 - symbol:TRAF2 "Uncharacterized protein"... 199 1.5e-21 2
UNIPROTKB|F1PY23 - symbol:TRAF2 "Uncharacterized protein"... 204 2.2e-21 2
UNIPROTKB|E2R6C7 - symbol:TRAF2 "Uncharacterized protein"... 204 2.2e-21 2
UNIPROTKB|Q12933 - symbol:TRAF2 "TNF receptor-associated ... 196 6.9e-21 2
UNIPROTKB|F1RVZ4 - symbol:TRAF2 "Uncharacterized protein"... 200 8.0e-21 2
ZFIN|ZDB-GENE-030131-5735 - symbol:traf6 "TNF receptor-as... 270 9.0e-21 1
UNIPROTKB|J9NS71 - symbol:TRAF2 "Uncharacterized protein"... 199 9.8e-21 2
UNIPROTKB|E1BBH2 - symbol:TRAF3 "Uncharacterized protein"... 191 1.0e-20 2
MGI|MGI:101835 - symbol:Traf2 "TNF receptor-associated fa... 195 1.1e-20 2
UNIPROTKB|F1NMN9 - symbol:TRAF3 "Uncharacterized protein"... 181 1.8e-20 2
UNIPROTKB|B1AMX9 - symbol:TRAF2 "TNF receptor-associated ... 180 2.7e-20 2
ZFIN|ZDB-GENE-071120-4 - symbol:traf1 "TNF receptor-assoc... 175 3.0e-20 3
UNIPROTKB|Q13114 - symbol:TRAF3 "TNF receptor-associated ... 190 3.4e-20 2
MGI|MGI:108041 - symbol:Traf3 "TNF receptor-associated fa... 191 4.2e-20 2
UNIPROTKB|F1SA11 - symbol:LOC100156979 "Uncharacterized p... 191 4.2e-20 2
UNIPROTKB|K7GKN5 - symbol:LOC100156979 "Uncharacterized p... 189 6.0e-20 2
UNIPROTKB|F1NLM1 - symbol:F1NLM1 "Uncharacterized protein... 195 6.3e-20 2
UNIPROTKB|E2RG86 - symbol:TRAF3 "Uncharacterized protein"... 191 6.9e-20 2
ZFIN|ZDB-GENE-040801-257 - symbol:traf3 "TNF receptor-ass... 178 1.2e-19 2
UNIPROTKB|K7GLK8 - symbol:LOC100156979 "Uncharacterized p... 180 5.2e-19 2
ZFIN|ZDB-GENE-030131-5345 - symbol:traf2b "Tnf receptor-a... 186 1.7e-18 2
ZFIN|ZDB-GENE-040308-1 - symbol:traf4a "tnf receptor-asso... 165 3.2e-18 3
ZFIN|ZDB-GENE-071120-3 - symbol:traf5 "Tnf receptor-assoc... 163 1.7e-17 2
UNIPROTKB|E2QYH9 - symbol:TRAF4 "Uncharacterized protein"... 158 5.7e-16 2
UNIPROTKB|F6RJL7 - symbol:TRAF4 "Uncharacterized protein"... 159 1.3e-15 2
UNIPROTKB|Q9BUZ4 - symbol:TRAF4 "TNF receptor-associated ... 159 2.0e-15 2
MGI|MGI:1202880 - symbol:Traf4 "TNF receptor associated f... 157 3.5e-15 2
RGD|1306708 - symbol:Traf4 "Tnf receptor associated facto... 157 3.5e-15 2
ZFIN|ZDB-GENE-040305-2 - symbol:traf4b "tnf receptor-asso... 136 2.1e-13 3
UNIPROTKB|A7YWC7 - symbol:TRAF5 "Uncharacterized protein"... 205 2.1e-13 1
UNIPROTKB|K7GN38 - symbol:TRAF5 "Uncharacterized protein"... 176 1.1e-12 1
UNIPROTKB|Q805B1 - symbol:TRAF-5 "Uncharacterized protein... 196 2.1e-12 1
UNIPROTKB|E1BMI8 - symbol:TRAF1 "Uncharacterized protein"... 193 2.4e-12 1
MGI|MGI:101836 - symbol:Traf1 "TNF receptor-associated fa... 188 8.4e-12 1
UNIPROTKB|Q13077 - symbol:TRAF1 "TNF receptor-associated ... 184 9.3e-12 2
RGD|1304633 - symbol:Traf3 "Tnf receptor-associated facto... 189 1.2e-11 1
UNIPROTKB|A6NHG8 - symbol:TRAF3 "TNF receptor-associated ... 188 1.6e-11 1
UNIPROTKB|K7GRG1 - symbol:TRAF2 "Uncharacterized protein"... 160 2.2e-11 2
UNIPROTKB|F6SA91 - symbol:TRAF4 "TNF receptor-associated ... 112 3.0e-10 2
RGD|1310457 - symbol:Traf2 "Tnf receptor-associated facto... 112 5.7e-10 2
UNIPROTKB|E1C2K2 - symbol:TRAF5 "Uncharacterized protein"... 166 1.9e-09 1
UNIPROTKB|Q5ZIR9 - symbol:RNF185 "E3 ubiquitin-protein li... 145 2.5e-09 1
UNIPROTKB|I3LC29 - symbol:TRAF1 "Uncharacterized protein"... 162 4.2e-09 1
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 138 1.4e-08 1
UNIPROTKB|F1RNA8 - symbol:TRAF4 "Uncharacterized protein"... 159 1.6e-08 1
FB|FBgn0026319 - symbol:Traf4 "TNF-receptor-associated fa... 143 2.1e-08 2
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 134 3.9e-08 1
UNIPROTKB|A2AAZ4 - symbol:TRIM39 "E3 ubiquitin-protein li... 134 3.9e-08 1
UNIPROTKB|A2AAZ5 - symbol:TRIM39 "E3 ubiquitin-protein li... 134 3.9e-08 1
FB|FBgn0028847 - symbol:CG9014 species:7227 "Drosophila m... 152 5.3e-08 1
UNIPROTKB|A4IFC2 - symbol:RNF185 "RNF185 protein" species... 138 5.7e-08 1
UNIPROTKB|F1PCX5 - symbol:RNF185 "Uncharacterized protein... 138 5.7e-08 1
UNIPROTKB|Q96GF1 - symbol:RNF185 "E3 ubiquitin-protein li... 138 5.7e-08 1
UNIPROTKB|F2Z4Y3 - symbol:RNF185 "Uncharacterized protein... 138 5.7e-08 1
MGI|MGI:1922078 - symbol:Rnf185 "ring finger protein 185"... 138 5.7e-08 1
RGD|1564777 - symbol:Rnf185 "ring finger protein 185" spe... 138 5.7e-08 1
UNIPROTKB|E2QWC6 - symbol:TRAF1 "Uncharacterized protein"... 152 9.1e-08 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 130 1.0e-07 1
WB|WBGene00004381 - symbol:rnf-5 species:6239 "Caenorhabd... 144 1.3e-07 1
UNIPROTKB|Q09463 - symbol:rnf-5 "RING finger protein 5" s... 144 1.3e-07 1
ZFIN|ZDB-GENE-040426-1977 - symbol:rnf185 "ring finger pr... 137 1.5e-07 1
UNIPROTKB|I3LBF4 - symbol:LOC100737614 "Uncharacterized p... 149 2.0e-07 1
UNIPROTKB|A2AAZ3 - symbol:TRIM39 "E3 ubiquitin-protein li... 124 4.7e-07 1
UNIPROTKB|H3BPZ9 - symbol:RNF166 "RING finger protein 166... 124 4.7e-07 1
UNIPROTKB|E5RI62 - symbol:TRIM17 "E3 ubiquitin-protein li... 123 6.0e-07 1
UNIPROTKB|E1BTQ2 - symbol:RNF8 "Uncharacterized protein" ... 120 1.3e-06 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 120 1.3e-06 1
UNIPROTKB|A2AE51 - symbol:TRIM26 "Tripartite motif-contai... 120 1.3e-06 1
UNIPROTKB|Q5SPU2 - symbol:TRIM26 "Tripartite motif-contai... 120 1.3e-06 1
UNIPROTKB|I3LUY7 - symbol:I3LUY7 "Uncharacterized protein... 120 1.3e-06 1
MGI|MGI:1914914 - symbol:Rnf125 "ring finger protein 125"... 135 1.5e-06 1
UNIPROTKB|F1SME2 - symbol:F1SME2 "Uncharacterized protein... 140 1.9e-06 1
GENEDB_PFALCIPARUM|PF10_0127 - symbol:PF10_0127 "hypothet... 126 2.0e-06 2
UNIPROTKB|Q8IJR5 - symbol:PF10_0127 "Conserved Plasmodium... 126 2.0e-06 2
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 118 2.1e-06 1
UNIPROTKB|Q6J211 - symbol:RNF114 "Uncharacterized protein... 133 2.2e-06 1
UNIPROTKB|I3LS75 - symbol:I3LS75 "Uncharacterized protein... 139 2.5e-06 1
RGD|1306757 - symbol:Rnf125 "ring finger protein 125" spe... 133 2.6e-06 1
UNIPROTKB|B1AMX7 - symbol:TRAF2 "TNF receptor-associated ... 123 3.0e-06 1
UNIPROTKB|A2AAZ6 - symbol:TRIM39 "E3 ubiquitin-protein li... 134 3.1e-06 1
WARNING: Descriptions of 168 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|A7XUJ6 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9823 "Sus scrofa" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0046849 "bone remodeling" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005938 GO:GO:0005634 GO:GO:0007165
GO:GO:0042981 GO:GO:0005811 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:EU095967
RefSeq:NP_001098756.1 UniGene:Ssc.96412 ProteinModelPortal:A7XUJ6
SMR:A7XUJ6 STRING:A7XUJ6 Ensembl:ENSSSCT00000014516
Ensembl:ENSSSCT00000033074 GeneID:396629 KEGG:ssc:396629
Uniprot:A7XUJ6
Length = 541
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 131/467 (28%), Positives = 219/467 (46%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP C ++ + E H C + + P + +
Sbjct: 124 AKREILSLTVKCPNVGCLHKMELRHLEDHQAHCEFALMNCPQCQRPFQKCQLNIHILKEC 183
Query: 132 PTNKRNSKILTVTV-FPE-HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKT-S 188
P + + V++ F + ++ Q N C++ C V + + HYDL +
Sbjct: 184 PRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEY----CNTVLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ F+ + C + Q + H +++T + + A ++ + P ++ D
Sbjct: 239 APVPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMMAQALQGLSL-AVAPVPQRDMLPYD 297
Query: 248 KSSEGDCSCKTCGDNS--HLLKLVYERMVLLEQSMLEQKIKVNNFEL---NLKQT-EEIE 301
S S C D + ++ + R+V + + E K+ + LK+T +E
Sbjct: 298 SSPLSRISSGCCSDQNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRSLE 357
Query: 302 DNVV---LKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRE 357
D V + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 358 DKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLP 417
Query: 358 DAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFD 409
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE I +EI K
Sbjct: 418 TAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPIRQNHEEIMDAKPELL 476
Query: 410 SFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + D L R F+ +DDT +++ +V+
Sbjct: 477 AFQRPT-IPRNPKGFGYVTFMHL-DALRQ-RTFI-KDDTLLVRCEVS 519
>RGD|1306853 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005811
"lipid particle" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IMP] [GO:0006955 "immune response"
evidence=ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA;ISO] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=ISO] [GO:0009898 "internal side of plasma
membrane" evidence=IEA;ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=IMP] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=IEA;ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030316
"osteoclast differentiation" evidence=IEA;ISO] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0031996
"thioesterase binding" evidence=IEA;ISO] [GO:0032147 "activation of
protein kinase activity" evidence=ISO] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA;ISO]
[GO:0035631 "CD40 receptor complex" evidence=IEA;ISO] [GO:0042088
"T-helper 1 type immune response" evidence=IEA;ISO] [GO:0042102
"positive regulation of T cell proliferation" evidence=IEA;ISO]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA;ISO] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0043234 "protein
complex" evidence=IMP] [GO:0043422 "protein kinase B binding"
evidence=IEA;ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA;ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA;ISO] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA;ISO] [GO:0045453 "bone resorption" evidence=IEA;ISO]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0046849 "bone remodeling" evidence=ISO]
[GO:0047485 "protein N-terminus binding" evidence=IEA;ISO]
[GO:0048468 "cell development" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048661
"positive regulation of smooth muscle cell proliferation"
evidence=IMP] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA;ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA;ISO] [GO:0051865
"protein autoubiquitination" evidence=IEA;ISO] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;ISS]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
RGD:1306853 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0043234 GO:GO:0006461 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 EMBL:CH473949 GO:GO:0045672
GO:GO:0030316 GO:GO:0032743 GO:GO:0051023 GO:GO:0043507
GO:GO:0070498 GO:GO:0045410 GO:GO:2000679 GO:GO:0045084
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:BC168921
IPI:IPI00363697 RefSeq:NP_001101224.1 UniGene:Rn.220435
ProteinModelPortal:B5DF45 STRING:B5DF45 PhosphoSite:B5DF45
Ensembl:ENSRNOT00000006148 GeneID:311245 KEGG:rno:311245
UCSC:RGD:1306853 NextBio:663249 Genevestigator:B5DF45
Uniprot:B5DF45
Length = 530
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 129/466 (27%), Positives = 216/466 (46%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP K C ++ + E H C + P + +
Sbjct: 123 AKREILSLTVKCPNKGCVQKMELRHLEDHQVHCEFALVICPQCQRFFQKCQINKHIIEDC 182
Query: 132 PTNKRNSKILTVTV-FPE-HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKT-S 188
P + + V + + E ++ Q N C++ C + + + HYDL +
Sbjct: 183 PRRQVSCVNCAVPMPYEEKEIHDQSCPLANIICEY----CGTILIREQM-PNHYDLDCPT 237
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ F+ + C + Q + H +++T ++ L+ H L +
Sbjct: 238 APVPCTFSVFGCHEKMQRNHLARHLQENT----QLHMRLLAQAVHNVNL---SLRPCDAS 290
Query: 248 KSSEGDCSCKTCGDN-SHLLKLVYERMVLLEQSMLEQKIKVNNFELN---LKQT-EEIED 302
S G C+ N +K + R+V + + E K+ ++ LK+T +ED
Sbjct: 291 SPSRG---CRPEDPNYEETVKQLEGRLVRQDHQIRELTAKMETQSMHVSELKRTIRSLED 347
Query: 303 NVV---LKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRED 358
V + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 348 KVAEMEAQQCNGIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPT 407
Query: 359 AQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDS 410
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE I +E+ K +
Sbjct: 408 AQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAVIRQNHEEVMDAKPELLA 466
Query: 411 FKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
F+RP N K FG+ F+ + + L +G ++DDT +++ +V+
Sbjct: 467 FQRPT-IPRNPKGFGYVTFMHL-EALR--QGTFIKDDTLLVRCEVS 508
>MGI|MGI:108072 [details] [associations]
symbol:Traf6 "TNF receptor-associated factor 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0001503 "ossification"
evidence=IMP] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0002726 "positive regulation of T cell cytokine production"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006461 "protein complex assembly" evidence=ISO]
[GO:0006955 "immune response" evidence=IMP] [GO:0007165 "signal
transduction" evidence=IDA;TAS] [GO:0007249 "I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=ISO] [GO:0007254 "JNK
cascade" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IGI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=ISO] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IMP] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IMP]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0032147
"activation of protein kinase activity" evidence=ISO] [GO:0032743
"positive regulation of interleukin-2 production" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042088
"T-helper 1 type immune response" evidence=IMP] [GO:0042102
"positive regulation of T cell proliferation" evidence=IMP]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IMP] [GO:0042826 "histone deacetylase binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISO;IMP] [GO:0043234 "protein
complex" evidence=ISO] [GO:0043422 "protein kinase B binding"
evidence=ISO] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IMP] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IMP] [GO:0045453 "bone resorption" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046849 "bone remodeling" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048468 "cell development" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048661 "positive regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0050852 "T cell receptor signaling
pathway" evidence=ISO] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0051865 "protein
autoubiquitination" evidence=ISO;TAS] [GO:0070498
"interleukin-1-mediated signaling pathway" evidence=ISO;IMP]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO;IDA]
[GO:0070555 "response to interleukin-1" evidence=ISO] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:108072 Prosite:PS00518 GO:GO:0005829
GO:GO:0005938 GO:GO:0048471 GO:GO:0042981 GO:GO:0019886
GO:GO:0050852 GO:GO:0042088 GO:GO:0007254 GO:GO:0005811
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0031965
GO:GO:0048661 GO:GO:0045944 Reactome:REACT_115202 EMBL:CH466519
GO:GO:0000122 GO:GO:0004871 Reactome:REACT_107772 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102 GO:GO:0001843
GO:GO:0042475 GO:GO:0045453 GO:GO:0004842 GO:GO:0001503
GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534
GO:GO:0048468 GO:GO:0051865 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AL929571 GeneTree:ENSGT00550000074359 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:D84655
EMBL:AK041172 EMBL:AK155434 EMBL:BC060705 IPI:IPI00136488
IPI:IPI00222919 RefSeq:NP_033450.2 UniGene:Mm.292729 HSSP:Q9Y4K3
ProteinModelPortal:P70196 SMR:P70196 DIP:DIP-29812N IntAct:P70196
MINT:MINT-252449 STRING:P70196 PhosphoSite:P70196 PRIDE:P70196
Ensembl:ENSMUST00000004949 GeneID:22034 KEGG:mmu:22034
UCSC:uc008lhl.1 UCSC:uc008lhm.1 InParanoid:Q6P9M0 NextBio:301798
Bgee:P70196 CleanEx:MM_TRAF6 Genevestigator:P70196
GermOnline:ENSMUSG00000027164 Uniprot:P70196
Length = 530
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 123/460 (26%), Positives = 215/460 (46%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP K C ++ + E H C + + P + +
Sbjct: 123 AKREILSLTVKCPNKGCLQKMELRHLEDHQVHCEFALVNCPQCQRPFQKCQVNTHIIEDC 182
Query: 132 PTNKRNSKILTVTVFPEH--LNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKT-S 188
P + + V++ E ++ Q N C++ C + + + HYDL +
Sbjct: 183 PRRQVSCVNCAVSMAYEEKEIHDQSCPLANIICEY----CGTILIREQM-PNHYDLDCPT 237
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD---PNKNQA 244
+ F+ + C + Q + H +++T + A + N + D P++
Sbjct: 238 APIPCTFSVFGCHEKMQRNHLARHLQENTQLHMRLLAQAVHNVNLALRPCDAASPSRGCR 297
Query: 245 GDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNV 304
+D + E + K S L++ ++ L + M Q + V + ++ E+ +
Sbjct: 298 PEDPNYEE--TIKQL--ESRLVRQDHQIRELTAK-METQSMYVGELKRTIRTLEDKVAEM 352
Query: 305 VLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ--- 360
+ CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++ AQ
Sbjct: 353 EAQQCNGIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCA 412
Query: 361 -YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF--SITDEIQSDK-NFDSFKRPVN 416
Y+SLF+H +QGE D L WPF G IR T L+ S +E+ K +F+RP
Sbjct: 413 NYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEALIRQNHEEVMDAKPELLAFQRPT- 471
Query: 417 FFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
N K FG+ F+ + + L +G ++DDT +++ +V+
Sbjct: 472 IPRNPKGFGYVTFMHL-EALR--QGTFIKDDTLLVRCEVS 508
>UNIPROTKB|Q3ZCC3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9913 "Bos taurus" [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:2000679
"positive regulation of transcription regulatory region DNA
binding" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0051092 "positive regulation
of NF-kappaB transcription factor activity" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0045410 "positive regulation of interleukin-6 biosynthetic
process" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0043011 "myeloid dendritic cell differentiation"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042088 "T-helper 1 type immune
response" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0032743 "positive regulation of interleukin-2
production" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031666 "positive regulation of lipopolysaccharide-mediated
signaling pathway" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007249
"I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
GO:GO:0048471 GO:GO:0042981 GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 GO:GO:0005811 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0031965 GO:GO:0045944 GO:GO:0000122
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0004842
GO:GO:0001503 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:0048468 GO:GO:0007249 SUPFAM:SSF49599
GO:GO:0043011 GO:GO:0035631 GO:GO:0045672 GO:GO:0030316
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 GeneTree:ENSGT00550000074359 EMBL:DQ319074
EMBL:DQ407276 EMBL:BC102522 IPI:IPI00710621 RefSeq:NP_001029833.1
UniGene:Bt.89201 ProteinModelPortal:Q3ZCC3 SMR:Q3ZCC3 STRING:Q3ZCC3
PRIDE:Q3ZCC3 Ensembl:ENSBTAT00000021630 GeneID:539124
KEGG:bta:539124 CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625
HOVERGEN:HBG060248 InParanoid:Q3ZCC3 KO:K03175 OMA:SEAPIRQ
OrthoDB:EOG4320XV NextBio:20877796 PANTHER:PTHR10131:SF48
Uniprot:Q3ZCC3
Length = 542
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 126/469 (26%), Positives = 218/469 (46%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 65 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + S P + +
Sbjct: 124 AKREILSLMVKCPNEGCLHKMELRHLEEHQAHCEFALMSCPQCQRPFQKCHLNIHILKEC 183
Query: 132 PTNKRNSKILTVTV-FPE-HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKT-S 188
P + + V++ F + ++ Q N C++ C + + + HYDL +
Sbjct: 184 PRRQVPCENCAVSMAFEDKEIHEQNCPLANVICEY----CNTMLIREQM-PNHYDLDCPT 238
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKN--------KEHESKLWD- 238
+ F+ + C + Q + H +++T + + A ++ + L+D
Sbjct: 239 APVPCTFSAFGCHEKMQRNHLARHLQENTQSHMRMMAQAVQTLSLAVAPVPQCTMPLYDS 298
Query: 239 --PNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQ 296
P + +G + SE +T L ++ L M Q + VN + ++
Sbjct: 299 VPPTRPSSG--RHSEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVNELKRTIRT 356
Query: 297 TEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNIS 355
E+ + + CNG+Y WK+ NF LK +E +S FY+ GY+ C R+++
Sbjct: 357 LEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQ 416
Query: 356 REDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-N 407
AQ Y+SLF+H +QGE D L WPF G IR T L+ SE ++ +EI K
Sbjct: 417 LPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAAVRQNHEEIMDAKPE 475
Query: 408 FDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+F+RP N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 476 LLAFQRPT-IPRNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 520
>UNIPROTKB|B6CJY4 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9531 "Cercocebus atys" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005811 "lipid particle"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005938 GO:GO:0005634
GO:GO:0007165 GO:GO:0042981 GO:GO:0005811 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 HOVERGEN:HBG060248
PANTHER:PTHR10131:SF48 EMBL:EU204928 ProteinModelPortal:B6CJY4
Uniprot:B6CJY4
Length = 522
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 120/458 (26%), Positives = 211/458 (46%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + P + +
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDC 182
Query: 132 PTNKRN-SKILTVTVFPE-HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKT-S 188
P + + + F + ++ Q N C++ C + + + HYDL +
Sbjct: 183 PRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEY----CNTILIREQM-PNHYDLDCPT 237
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ F+ + C + Q + H +++T + + A + H L P+ +
Sbjct: 238 APIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAV----HSLSLI-PDSGYVSEV 292
Query: 248 KSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
++ + +T L ++ L M Q V+ + ++ E+ + +
Sbjct: 293 RNFQ-----ETIHQLEGRLVRQDHQIRELTAKMETQSTYVSELKRTIRTLEDKVAEIEAQ 347
Query: 308 LCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YL 362
CNG+Y WK+ NF LK + +E +S FY+ GY+ C R+++ AQ Y+
Sbjct: 348 QCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYI 407
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFF 418
SLF+H +QGE D L WPF G IR T L+ SE + +EI K + +F+RP
Sbjct: 408 SLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEEIMDAKPDLLAFQRPT-IP 465
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 466 RNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 500
>UNIPROTKB|B6CJY5 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9544 "Macaca mulatta" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005886 GO:GO:0005938 GO:GO:0048471
GO:GO:0042981 GO:GO:0050852 GO:GO:0005811 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070555 GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907
GO:GO:0070534 SUPFAM:SSF49599 GO:GO:0045672 GO:GO:0032743
GO:GO:0043507 GO:GO:2000679 GO:GO:0002726 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
PANTHER:PTHR10131:SF48 EMBL:EU204929 RefSeq:NP_001129268.1
UniGene:Mmu.17706 STRING:B6CJY5 GeneID:716907 KEGG:mcc:716907
NextBio:19981456 Uniprot:B6CJY5
Length = 522
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 120/458 (26%), Positives = 211/458 (46%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + P + +
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILKDC 182
Query: 132 PTNKRN-SKILTVTVFPE-HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKT-S 188
P + + + F + ++ Q N C++ C + + + HYDL +
Sbjct: 183 PRRQVSCDNCAALVAFEDKEIHDQNCPLANVICEY----CNTILIREQM-PNHYDLDCPT 237
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ F+ + C + Q + H +++T + + A + H L P+ +
Sbjct: 238 APIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAV----HSLSLI-PDSGYVSEV 292
Query: 248 KSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
++ + +T L ++ L M Q V+ + ++ E+ + +
Sbjct: 293 RNFQ-----ETIHQLEGRLVRQDHQIRELTAKMETQSTYVSELKRTIRTLEDKVAEIEAQ 347
Query: 308 LCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YL 362
CNG+Y WK+ NF LK + +E +S FY+ GY+ C R+++ AQ Y+
Sbjct: 348 QCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYI 407
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFF 418
SLF+H +QGE D L WPF G IR T L+ SE + +EI K + +F+RP
Sbjct: 408 SLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEEIMDAKPDLLAFQRPT-IP 465
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 466 RNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 500
>UNIPROTKB|Q9Y4K3 [details] [associations]
symbol:TRAF6 "TNF receptor-associated factor 6"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=IEA] [GO:0030316 "osteoclast differentiation"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0042088 "T-helper 1 type immune response" evidence=IEA]
[GO:0042102 "positive regulation of T cell proliferation"
evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IEA] [GO:0043011 "myeloid dendritic cell
differentiation" evidence=IEA] [GO:0045084 "positive regulation of
interleukin-12 biosynthetic process" evidence=IEA] [GO:0045410
"positive regulation of interleukin-6 biosynthetic process"
evidence=IEA] [GO:0045453 "bone resorption" evidence=IEA]
[GO:0048468 "cell development" evidence=IEA] [GO:0048661 "positive
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0070498 "interleukin-1-mediated signaling pathway"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051865 "protein
autoubiquitination" evidence=IDA;TAS] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=EXP;IDA;TAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IMP;TAS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP;IDA;TAS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0043422 "protein kinase B binding" evidence=IPI]
[GO:0070534 "protein K63-linked ubiquitination" evidence=IGI;IDA]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=IDA;NAS] [GO:0070555 "response to interleukin-1"
evidence=IDA] [GO:0032147 "activation of protein kinase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045672 "positive regulation of osteoclast differentiation"
evidence=IDA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA;TAS] [GO:0042826 "histone
deacetylase binding" evidence=IPI] [GO:0031435 "mitogen-activated
protein kinase kinase kinase binding" evidence=IPI] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0005811 "lipid particle" evidence=ISS]
[GO:0000187 "activation of MAPK activity" evidence=TAS] [GO:0002224
"toll-like receptor signaling pathway" evidence=TAS] [GO:0002755
"MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0002756 "MyD88-independent toll-like receptor
signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=TAS]
[GO:0007254 "JNK cascade" evidence=TAS] [GO:0008063 "Toll signaling
pathway" evidence=TAS] [GO:0010008 "endosome membrane"
evidence=TAS] [GO:0031293 "membrane protein intracellular domain
proteolysis" evidence=TAS] [GO:0034130 "toll-like receptor 1
signaling pathway" evidence=TAS] [GO:0034134 "toll-like receptor 2
signaling pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3
signaling pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4
signaling pathway" evidence=TAS] [GO:0035666 "TRIF-dependent
toll-like receptor signaling pathway" evidence=TAS] [GO:0035872
"nucleotide-binding domain, leucine rich repeat containing receptor
signaling pathway" evidence=TAS] [GO:0045087 "innate immune
response" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0051403 "stress-activated MAPK
cascade" evidence=TAS] [GO:0070423 "nucleotide-binding
oligomerization domain containing signaling pathway" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;NAS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=NAS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IDA]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] Reactome:REACT_6782 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005938 GO:GO:0048471 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway
Pathway_Interaction_DB:cd8tcrpathway EMBL:CH471064 GO:GO:0042981
Pathway_Interaction_DB:tcrpathway GO:GO:0019886 GO:GO:0050852
GO:GO:0042088 Pathway_Interaction_DB:bcr_5pathway GO:GO:0007254
GO:GO:0005811 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0031965 GO:GO:0048661 GO:GO:0045944 GO:GO:0045087
GO:GO:0000187 GO:GO:0010008 GO:GO:0000122 GO:GO:0031293
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0042102
GO:GO:0001843 GO:GO:0042475 GO:GO:0045453 GO:GO:0031398
GO:GO:0070555 GO:GO:0004842 GO:GO:0001503 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0048468
GO:GO:0051865 GO:GO:0002755 GO:GO:0008063 GO:GO:0034130
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
Pathway_Interaction_DB:nfkappabcanonicalpathway
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0007249
SUPFAM:SSF49599 GO:GO:0043011 GO:GO:0050870 GO:GO:0035631
Pathway_Interaction_DB:p38alphabetapathway GO:GO:0045672
GO:GO:0030316 GO:GO:0070423 Pathway_Interaction_DB:il1pathway
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 GO:GO:2000679 GO:GO:0045084 GO:GO:0031666
GO:GO:0002726 EMBL:AC009656 PDB:1LB6 PDBsum:1LB6 CTD:7189
eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175
OMA:SEAPIRQ OrthoDB:EOG4320XV PANTHER:PTHR10131:SF48 EMBL:U78798
EMBL:AY228337 EMBL:AK292978 EMBL:AC061999 EMBL:BC031052
IPI:IPI00743663 PIR:S71821 RefSeq:NP_004611.1 RefSeq:NP_665802.1
UniGene:Hs.444172 UniGene:Hs.591983 PDB:1LB4 PDB:1LB5 PDB:2ECI
PDB:2JMD PDB:3HCS PDB:3HCT PDB:3HCU PDBsum:1LB4 PDBsum:1LB5
PDBsum:2ECI PDBsum:2JMD PDBsum:3HCS PDBsum:3HCT PDBsum:3HCU
ProteinModelPortal:Q9Y4K3 SMR:Q9Y4K3 DIP:DIP-27515N IntAct:Q9Y4K3
MINT:MINT-88585 STRING:Q9Y4K3 PhosphoSite:Q9Y4K3 DMDM:30580642
PaxDb:Q9Y4K3 PRIDE:Q9Y4K3 DNASU:7189 Ensembl:ENST00000348124
Ensembl:ENST00000526995 GeneID:7189 KEGG:hsa:7189 UCSC:uc001mwq.2
GeneCards:GC11M036467 HGNC:HGNC:12036 HPA:CAB004605 HPA:HPA019805
HPA:HPA020599 MIM:602355 neXtProt:NX_Q9Y4K3 PharmGKB:PA36713
InParanoid:Q9Y4K3 PhylomeDB:Q9Y4K3 ChiTaRS:Traf6
EvolutionaryTrace:Q9Y4K3 GenomeRNAi:7189 NextBio:28192 Bgee:Q9Y4K3
CleanEx:HS_TRAF6 Genevestigator:Q9Y4K3 GermOnline:ENSG00000175104
Uniprot:Q9Y4K3
Length = 522
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 119/458 (25%), Positives = 212/458 (46%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC-YLKYSQPSVEDITDSPTSSFRNTSGI 131
+REIL + CP + C ++ + E H C + P + +
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMDCPQCQRPFQKFHINIHILKDC 182
Query: 132 PTNKRNSKILTVTV-FPE-HLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKT-S 188
P + + ++ F + ++ Q N C++ C + + + HYDL +
Sbjct: 183 PRRQVSCDNCAASMAFEDKEIHDQNCPLANVICEY----CNTILIREQM-PNHYDLDCPT 237
Query: 189 FHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDD 247
+ F+ + C + Q + H +++T + + A + H + P+ +
Sbjct: 238 APIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAV----HSLSVI-PDSGYISEV 292
Query: 248 KSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLK 307
++ + +T L ++ L M Q + V+ + ++ E+ + +
Sbjct: 293 RNFQ-----ETIHQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVAEIEAQ 347
Query: 308 LCNGVYFWKMYNFPAKLK-EMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQ----YL 362
CNG+Y WK+ NF LK + +E +S FY+ GY+ C R+++ AQ Y+
Sbjct: 348 QCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYI 407
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSIT---DEIQSDK-NFDSFKRPVNFF 418
SLF+H +QGE D L WPF G IR T L+ SE + +EI K +F+RP
Sbjct: 408 SLFVHTMQGEYDSHLPWPFQGTIRLTILD-QSEAPVRQNHEEIMDAKPELLAFQRPT-IP 465
Query: 419 LNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
N K FG+ F+ + + R F+ +DDT +++ +V+
Sbjct: 466 RNPKGFGYVTFMHLEALRQ--RTFI-KDDTLLVRCEVS 500
>UNIPROTKB|Q6DJN2 [details] [associations]
symbol:traf6-b "TNF receptor-associated factor 6-B"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:BC075143 RefSeq:NP_001086348.1 UniGene:Xl.29694
ProteinModelPortal:Q6DJN2 SMR:Q6DJN2 GeneID:444777 KEGG:xla:444777
CTD:444777 Xenbase:XB-GENE-865394 Uniprot:Q6DJN2
Length = 556
Score = 236 (88.1 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 84/312 (26%), Positives = 137/312 (43%)
Query: 147 PEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQST 206
P H +M + PC +Y+ GC E + L +H T H+ ++F S + T
Sbjct: 230 PSHYSMD-CTMAPIPCMYYEFGCTEKMQRNDLA-RHLQDFTQAHMRMMFQTLRSFSTTPT 287
Query: 207 NTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLL 266
+ S NQ E L H S + P+ + + + + G L+
Sbjct: 288 SHISDISFCDPNQFE-PVPLSVAPAHPSHM--PSHQDCSQETRNLRETIEQLEG---RLV 341
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE 326
+ ++ L+ + M Q VN + ++ E+ +V CNGV+ WK+ F K
Sbjct: 342 RQDHQIRELIAK-METQCTYVNELKHTIRSLEDKLLDVDGHHCNGVFIWKIKGFSGLQKT 400
Query: 327 MKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPF 381
+E +S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L WP
Sbjct: 401 QEEEKPVVIHSPGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPL 460
Query: 382 VGRIRFTALNTSSEFSITD--EIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
G IR + L+ S I D E+ K + +F+RP N K FG+ F+ + +
Sbjct: 461 HGTIRLSILDQSEGAIIQDQEEVMDTKPDLLAFQRPTTQ-RNPKGFGYVTFMHLNTLKQ- 518
Query: 439 GRGFLMEDDTFV 450
R ++ D FV
Sbjct: 519 -RQYVKNDTLFV 529
Score = 210 (79.0 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI + G CP+D ++L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACIVKSLRDAGHK-CPVDNEILMENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP + C+ + + E H+ C
Sbjct: 125 AKREILSLKVKCPSQGCTETMELRHLERHLGQC 157
>UNIPROTKB|Q28DL4 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599
CTD:7189 eggNOG:NOG289765 HOGENOM:HOG000006625 HOVERGEN:HBG060248
KO:K03175 PANTHER:PTHR10131:SF48 EMBL:CR855449 EMBL:BC082342
RefSeq:NP_001008162.2 UniGene:Str.8271 ProteinModelPortal:Q28DL4
SMR:Q28DL4 STRING:Q28DL4 GeneID:493524 KEGG:xtr:493524
Xenbase:XB-GENE-480628 InParanoid:Q641J5 Uniprot:Q28DL4
Length = 558
Score = 242 (90.2 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 85/325 (26%), Positives = 150/325 (46%)
Query: 147 PEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQST 206
P H +M + PC +Y+ GC E + L +H T H+ ++ S S T
Sbjct: 230 PAHYSMD-CTMAPIPCMYYEFGCTEKMQRNDLA-RHLQEFTQAHMRMMAQTLRSFSSSVT 287
Query: 207 NTPSHGRQDTS--NQKEIE-AYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNS 263
T SH D S + + E A H + P++N + + + + G
Sbjct: 288 PT-SH-MPDISFCDPSQFEPAPPSVATVHSTHT--PSQNDCTQETRNLRETIEQLEG--- 340
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
L++ ++ L+ + M Q VN + ++ + + + C+G++ W++ NF +
Sbjct: 341 RLVRQDHQIRELIAK-METQCTYVNELKHTIRSLDNRLGEMESQQCSGIFIWRINNFNSL 399
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
LK +E +S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D +L
Sbjct: 400 LKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLP 459
Query: 379 WPFVGRIRFTALNTSSEFSITD--EIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
WP G IR + L+ S ++ D E+ K +F+RP N K FG+ F+ + +
Sbjct: 460 WPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPT-VARNPKGFGYVTFMHLQAL 518
Query: 436 LDPGRGFLMEDDTFVIKTQVTEMTH 460
R ++ ++DT +++ VT TH
Sbjct: 519 KQ--RQYV-KNDTLLVRCSVT--TH 538
Score = 203 (76.5 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D + L ++ +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSIRDAGHK-CPVDNESLMENQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP + C+ + + E H+ C
Sbjct: 125 AKREILSLRVKCPSQGCTETMELRHLERHLVRC 157
Score = 39 (18.8 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 84 CPYKQ-----CSSQLSIPEYESHVNTCYLKY 109
CP +Q C+ +++ + +H TC L Y
Sbjct: 184 CPRRQIFCENCAVAMALEDKLNHDQTCPLAY 214
>UNIPROTKB|Q3MV19 [details] [associations]
symbol:traf6-a "TNF receptor-associated factor 6-A"
species:8355 "Xenopus laevis" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IDA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0007250 InterPro:IPR017907 GO:GO:0070534
SUPFAM:SSF49599 HOVERGEN:HBG060248 KO:K03175 PANTHER:PTHR10131:SF48
EMBL:AB100960 EMBL:BC108562 RefSeq:NP_001089863.1 UniGene:Xl.14682
ProteinModelPortal:Q3MV19 SMR:Q3MV19 GeneID:734929 KEGG:xla:734929
CTD:734929 Xenbase:XB-GENE-6254727 Uniprot:Q3MV19
Length = 556
Score = 222 (83.2 bits), Expect = 7.3e-32, Sum P(2) = 7.3e-32
Identities = 87/324 (26%), Positives = 145/324 (44%)
Query: 147 PEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQST 206
P H +M + PC + + GCRE + L D T H+ ++ S + T
Sbjct: 230 PAHYSMD-CTMAPIPCMYCEFGCREKMQRHNLAGHLQDF-TQAHMRMMAQTLRSFSTTPT 287
Query: 207 NTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLL 266
+ S NQ E L H S + P S+ DCS +T + +
Sbjct: 288 SHISDISFCDPNQFE-PVPLSVAPAHPSHM--P----------SQQDCSQET-RNLRETV 333
Query: 267 KLVYERMVLLEQSMLE--QKIKVNNFELN-LKQT-EEIEDNVV---LKLCNGVYFWKMYN 319
+ + R+V + + E K++ +N LK T +ED V CNGV+ W++
Sbjct: 334 EQLEGRLVRQDHQIRELIAKMETQCTYVNELKHTIHSLEDKVADMDAHRCNGVFIWRIKG 393
Query: 320 FPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGEND 374
F K +E +S FY+ GY+ C R+++ AQ Y+SLF+H +QG+ D
Sbjct: 394 FSGLQKSQEEEKPVVIHSPGFYTGDPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGDYD 453
Query: 375 DILDWPFVGRIRFTALNTSSEFSITDEIQ-SDKNFD--SFKRPVNFFLNKKAFGFNNFIR 431
+L WP G IR + L+ S + D+++ D D +F+RP N K FG+ F+
Sbjct: 454 SLLPWPLQGTIRLSILDQSESTARQDQVEVMDTKPDLLAFQRPTAP-RNPKGFGYVTFMH 512
Query: 432 VADVLDPGRGFLMEDDTFVIKTQV 455
+ + R ++ ++DT +++ V
Sbjct: 513 LNTLKQ--RQYV-KNDTLLVRCSV 533
Score = 201 (75.8 bits), Expect = 7.3e-32, Sum P(2) = 7.3e-32
Identities = 35/93 (37%), Positives = 55/93 (59%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI + G CP+D ++L + +F DN+
Sbjct: 66 LESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAGHK-CPVDNEILMEKQLFPDNF 124
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP C+ + + E H+ C
Sbjct: 125 AKREILSLRVKCPNLGCTDTMELRHLEHHLVQC 157
>UNIPROTKB|E1C626 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0002726 "positive
regulation of T cell cytokine production" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007249 "I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0009898 "internal side of plasma membrane" evidence=IEA]
[GO:0019886 "antigen processing and presentation of exogenous
peptide antigen via MHC class II" evidence=IEA] [GO:0030316
"osteoclast differentiation" evidence=IEA] [GO:0031435
"mitogen-activated protein kinase kinase kinase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IEA] [GO:0035631
"CD40 receptor complex" evidence=IEA] [GO:0042088 "T-helper 1 type
immune response" evidence=IEA] [GO:0042102 "positive regulation of
T cell proliferation" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043011 "myeloid dendritic
cell differentiation" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0045084 "positive regulation of interleukin-12 biosynthetic
process" evidence=IEA] [GO:0045410 "positive regulation of
interleukin-6 biosynthetic process" evidence=IEA] [GO:0045453 "bone
resorption" evidence=IEA] [GO:0045672 "positive regulation of
osteoclast differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0050852 "T cell receptor signaling pathway" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0070498 "interleukin-1-mediated
signaling pathway" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:2000679 "positive regulation of
transcription regulatory region DNA binding" evidence=IEA]
[GO:0002218 "activation of innate immune response" evidence=TAS]
[GO:0002224 "toll-like receptor signaling pathway" evidence=TAS]
[GO:0002755 "MyD88-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] [GO:0034134 "toll-like receptor 2 signaling
pathway" evidence=TAS] [GO:0034138 "toll-like receptor 3 signaling
pathway" evidence=TAS] [GO:0034142 "toll-like receptor 4 signaling
pathway" evidence=TAS] [GO:0034146 "toll-like receptor 5 signaling
pathway" evidence=TAS] [GO:0034154 "toll-like receptor 7 signaling
pathway" evidence=TAS] [GO:0035419 "activation of MAPK activity
involved in innate immune response" evidence=TAS] [GO:0035681
"toll-like receptor 15 signaling pathway" evidence=TAS] [GO:0035682
"toll-like receptor 21 signaling pathway" evidence=TAS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027139
Pfam:PF00917 Pfam:PF13639 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0048471 GO:GO:0042981
GO:GO:0019886 GO:GO:0050852 GO:GO:0042088 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0031965 GO:GO:0045944
GO:GO:0000122 GO:GO:0035419 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0042102 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:0002755
GO:GO:0034134 GO:GO:0034138 GO:GO:0034142 GO:GO:0007249
Reactome:REACT_102124 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0045672
GO:GO:0032743 GO:GO:0051023 GO:GO:0043507 GO:GO:0070498
GO:GO:0045410 Reactome:REACT_147795 GO:GO:0035681 GO:GO:0034146
GO:GO:2000679 GO:GO:0045084 GO:GO:0035682 GO:GO:0034154
GO:GO:0031666 GO:GO:0002726 GeneTree:ENSGT00550000074359
OMA:SEAPIRQ PANTHER:PTHR10131:SF48 EMBL:AADN02033086
IPI:IPI00571717 Ensembl:ENSGALT00000012888 Uniprot:E1C626
Length = 548
Score = 224 (83.9 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 64/200 (32%), Positives = 105/200 (52%)
Query: 272 RMVLLEQSMLE--QKIKVNNFEL-NLKQT-EEIEDNVV---LKLCNGVYFWKMYNFPAKL 324
R+V + + E K++ N + LK+T ++E + + CNG+Y WK+ NF L
Sbjct: 331 RLVRQDHQIRELIAKMETQNTHMAELKRTIRDLEGKITEMEAQQCNGIYIWKIENFSG-L 389
Query: 325 KEMKEINR--YFYSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILD 378
++ +E R +S FY+ GY+ C R++I AQ ++SLF+H +QGE D L
Sbjct: 390 QKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPSAQRCANFISLFVHTMQGEYDSHLP 449
Query: 379 WPFVGRIRFTALNTSS--EFSITDEIQSDK-NFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
WPF G IR + L+ S E +E+ K +F+RP N K FG+ F+ + +
Sbjct: 450 WPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAFQRPT-IHRNPKGFGYVTFMHLQTL 508
Query: 436 LDPGRGFLMEDDTFVIKTQV 455
R F+ +DDT +++ +V
Sbjct: 509 KQ--RTFV-KDDTLLVRCEV 525
Score = 195 (73.7 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 35/95 (36%), Positives = 56/95 (58%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWID-VKGKNY-CPIDEKVLTKDDIFID 70
L+ ++EC ICL L++A+ T CGH+FC CI I + + CP+D ++L ++ +F D
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRRCRDAGHKCPVDNEILLENQLFPD 123
Query: 71 NYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
N+ +REIL + CP K C ++ + E H C
Sbjct: 124 NFAKREILSLTVKCPNKGCCLKMELRHLEEHQLHC 158
Score = 46 (21.3 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 55 CPIDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYL 107
CP + K+ + + +E + CP C++ ++ + E H TC L
Sbjct: 165 CPQCQGAFQKNHL--KEHMTQECPRRQVCCP--NCATSMAYEDKELHDQTCPL 213
>UNIPROTKB|E2RDE8 [details] [associations]
symbol:TRAF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0050852 "T cell receptor signaling pathway"
evidence=IEA] [GO:0048468 "cell development" evidence=IEA]
[GO:0046849 "bone remodeling" evidence=IEA] [GO:0045672 "positive
regulation of osteoclast differentiation" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031666 "positive regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027139 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF48
EMBL:AAEX03011373 Ensembl:ENSCAFT00000010962 OMA:CLMALRN
Uniprot:E2RDE8
Length = 562
Score = 204 (76.9 bits), Expect = 7.3e-30, Sum P(2) = 7.3e-30
Identities = 51/148 (34%), Positives = 76/148 (51%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRY-F 334
L M Q + V+ + N++ E+ + + CNG+Y WK+ NF LK +E
Sbjct: 335 LTAKMETQSMHVSELKRNIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVI 394
Query: 335 YSACFYSSCFGYRFCTRVNISREDAQ----YLSLFIHLVQGENDDILDWPFVGRIRFTAL 390
+S FY+ GY+ C R+++ AQ Y+SLF+H +QGE D L WPF G IR L
Sbjct: 395 HSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLAIL 454
Query: 391 NTSSEFSIT---DEIQSDK-NFDSFKRP 414
+ SE + +EI K +F+RP
Sbjct: 455 D-QSEAPVRQNHEEIMDAKPELLAFQRP 481
Score = 202 (76.2 bits), Expect = 7.3e-30, Sum P(2) = 7.3e-30
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L++A+ T CGH+FC ACI I G CP+D ++L ++ +F DN+
Sbjct: 64 LESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHK-CPVDNEILLENQLFPDNF 122
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+REIL + CP + C ++ + E H C
Sbjct: 123 AKREILSLMVKCPNEGCLHKMELRHLEDHQLHC 155
>UNIPROTKB|O00463 [details] [associations]
symbol:TRAF5 "TNF receptor-associated factor 5"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043123 "positive
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0031996 "thioesterase binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0009898 "internal
side of plasma membrane" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IMP] [GO:0035631 "CD40 receptor complex" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0005813 GO:GO:0006915 GO:GO:0007165
EMBL:CH471100 GO:GO:0042981 GO:GO:0046872 GO:GO:0043123
GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907 SUPFAM:SSF49599
GO:GO:0035631 Gene3D:3.90.890.10 EMBL:AL590101 HOVERGEN:HBG058222
eggNOG:NOG239194 EMBL:AB000509 EMBL:CR536557 EMBL:BC029600
EMBL:U69108 IPI:IPI00005760 PIR:JC6539 RefSeq:NP_001029082.1
RefSeq:NP_004610.1 RefSeq:NP_665702.1 UniGene:Hs.523930
ProteinModelPortal:O00463 SMR:O00463 IntAct:O00463 STRING:O00463
PhosphoSite:O00463 PaxDb:O00463 PRIDE:O00463 DNASU:7188
Ensembl:ENST00000261464 Ensembl:ENST00000336184
Ensembl:ENST00000367004 GeneID:7188 KEGG:hsa:7188 UCSC:uc001hih.3
CTD:7188 GeneCards:GC01P211499 HGNC:HGNC:12035 HPA:CAB010277
HPA:HPA008052 MIM:602356 neXtProt:NX_O00463 PharmGKB:PA36712
InParanoid:O00463 KO:K09849 OMA:IDKSAWL OrthoDB:EOG4JWVD2
PhylomeDB:O00463 ChiTaRS:TRAF5 GenomeRNAi:7188 NextBio:28184
ArrayExpress:O00463 Bgee:O00463 CleanEx:HS_TRAF5
Genevestigator:O00463 GermOnline:ENSG00000082512
PANTHER:PTHR10131:SF23 Uniprot:O00463
Length = 557
Score = 205 (77.2 bits), Expect = 9.8e-29, Sum P(2) = 9.8e-29
Identities = 55/190 (28%), Positives = 97/190 (51%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-NGVYFWKMYNFPAKLKEMKE 329
+R+ +LE+ + +N + L + EE ++ C NG WK+ ++ K +E +
Sbjct: 364 QRLAVLEEETNKHDTHINIHKAQLSKNEE-RFKLLEGTCYNGKLIWKVTDYKMKKREAVD 422
Query: 330 INRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRI 385
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 423 GHTVSIFSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRV 482
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ S + +I + + D N SFKRP + +N A G F+ VL+ + ++
Sbjct: 483 TLMLLDQSGKKNIMETFKPDPNSSSFKRP-DGEMNI-ASGCPRFV-AHSVLENAKNAYIK 539
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 540 DDTLFLKVAV 549
Score = 190 (71.9 bits), Expect = 9.8e-29, Sum P(2) = 9.8e-29
Identities = 56/238 (23%), Positives = 108/238 (45%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCPYKQ-CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPT-SSFRNTSG 130
+RE+L + C C++++ + Y+ H+ C + Q S E + +
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLS 158
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC-----REVFKSQALLEKHYDL 185
R K L +N+Q + EN C Y V C + + K++ +++H +
Sbjct: 159 ASCQFRKEKCLYCKKDVVVINLQ-NHEENL-CPEYPVFCPNNCAKIILKTE--VDEHLAV 214
Query: 186 KTSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKN 242
+ F Y C+ + N H + ++ ++ + L KN + E ++ D +K+
Sbjct: 215 CPEAEQDCPFKHYGCAVTDKRRNLQQH--EHSALREHMRLVLEKNVQLEEQISDLHKS 270
>MGI|MGI:107548 [details] [associations]
symbol:Traf5 "TNF receptor-associated factor 5" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009898 "internal side of plasma
membrane" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0031996 "thioesterase binding" evidence=ISO]
[GO:0035631 "CD40 receptor complex" evidence=IDA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027130 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
MGI:MGI:107548 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0006915 GO:GO:0042981 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0004871 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907 SUPFAM:SSF49599
GO:GO:0035631 Gene3D:3.90.890.10 HOVERGEN:HBG058222
eggNOG:NOG239194 HOGENOM:HOG000231557 CTD:7188 KO:K09849
OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23 EMBL:D78141 EMBL:D83528
EMBL:BC012702 IPI:IPI00323891 RefSeq:NP_035763.1 UniGene:Mm.380491
UniGene:Mm.389227 PDB:4GJH PDBsum:4GJH ProteinModelPortal:P70191
SMR:P70191 IntAct:P70191 STRING:P70191 PhosphoSite:P70191
PRIDE:P70191 GeneID:22033 KEGG:mmu:22033 InParanoid:P70191
NextBio:301794 CleanEx:MM_TRAF5 Genevestigator:P70191
Uniprot:P70191
Length = 558
Score = 192 (72.6 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 55/190 (28%), Positives = 96/190 (50%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEI 330
+R+VLLE + +N + L + EE + +G WK+ ++ K +E E
Sbjct: 364 QRLVLLEGETSKHDAHINIHKAQLNKNEERFKQLEGACYSGKLIWKVTDYRVKKREAVEG 423
Query: 331 NRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIR 386
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 424 HTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVT 483
Query: 387 FTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ S + + I + ++D N SFKRP + +N A G F+ + L+ + ++
Sbjct: 484 LMLLDQSGKKNHIVETFKADPNSSSFKRP-DGEMNI-ASGCPRFVSHS-TLENSKNTYIK 540
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 541 DDTLFLKVAV 550
Score = 173 (66.0 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 53/232 (22%), Positives = 99/232 (42%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQQCIRSLRELNSVPICPVDKEVIKPQEVFKDNC 98
Query: 73 TRREILENNLTCPYKQ-CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPT-SSFRNTSG 130
+RE+L ++ C C++++ + ++ H+ C + E ++ +
Sbjct: 99 CKREVLNLHVYCKNAPGCNARIILGRFQDHLQHCSFQAVPCPNESCREAMLRKDVKEHLS 158
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC-REVFKS--QALLEKHYDLKT 187
R K L N+Q +E C Y V C ++ +A + +H +
Sbjct: 159 AYCRFREEKCLYCKRDIVVTNLQ--DHEENSCPAYPVSCPNRCVQTIPRARVNEHLTVCP 216
Query: 188 SFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWD 238
+ F Y C+ + N H R + Q + L KN + E ++ D
Sbjct: 217 EAEQDCPFKHYGCTVKGKRGNLLEHER--AALQDHMLLVLEKNYQLEQRISD 266
>UNIPROTKB|J9P706 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 OMA:IDKSAWL PANTHER:PTHR10131:SF23
EMBL:AAEX03005087 EMBL:AAEX03005088 Ensembl:ENSCAFT00000043751
Uniprot:J9P706
Length = 559
Score = 187 (70.9 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 56/197 (28%), Positives = 100/197 (50%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-NGVYFWKMYNFPAK 323
LL+ +R+V+LE + +N + L + EE ++ C NG WK+ ++ K
Sbjct: 359 LLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEE-RFKLLEGACYNGKLIWKVTDYKMK 417
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDW 379
+E + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L W
Sbjct: 418 KREALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQW 477
Query: 380 PFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
PF R+ L+ S + + I + ++D + SFKRP + +N A G F+ L+
Sbjct: 478 PFRQRVTLMLLDQSGKKNHIMETFKADPSSSSFKRP-DGEMNI-ASGCPRFV-AHSTLEN 534
Query: 439 GRGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 535 AKNTYIKDDTVFLKVAV 551
Score = 155 (59.6 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 27/88 (30%), Positives = 51/88 (57%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C++C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCALCHSVLHNPHQTGCGHRFCQHCILSLRELNAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCPYKQ-CSSQLSIPEYE 99
+RE+L + C C++++ + Y+
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRYQ 126
Score = 62 (26.9 bits), Expect = 2.6e-25, Sum P(3) = 2.6e-25
Identities = 26/105 (24%), Positives = 45/105 (42%)
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFH 190
+P + S+I+ T EHL + + ++ P K Y GC V + L++H H
Sbjct: 194 VPCPNKCSQIIPRTEVDEHLTVCPEAEQDCPFKHY--GCT-VKDKRGSLQEHEHSALRDH 250
Query: 191 LELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESK 235
+ L+ K Q ++ Q S +++ A +K E E K
Sbjct: 251 MLLVLEKNLQLEEQISDLYKSLEQKESKIQQL-AETVKKFEKEFK 294
>UNIPROTKB|I3L7X2 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 CTD:7188 KO:K09849 OMA:IDKSAWL
PANTHER:PTHR10131:SF23 EMBL:AEMK01103347 EMBL:CU915362
EMBL:FP565698 RefSeq:XP_003482803.1 UniGene:Ssc.41249
Ensembl:ENSSSCT00000022338 GeneID:396616 KEGG:ssc:396616
Uniprot:I3L7X2
Length = 558
Score = 187 (70.9 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 55/197 (27%), Positives = 99/197 (50%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-NGVYFWKMYNFPAK 323
LL+ +R+V+LE + +N + L + EE ++ C G WK+ ++ +
Sbjct: 358 LLETNDQRLVVLEGETNKHDAHINIHKAQLSKNEE-RFKLLESACYTGKLIWKVTDYKLR 416
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDW 379
+E + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L W
Sbjct: 417 KREALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQW 476
Query: 380 PFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
PF R+ L+ S + + I + ++D N SFKRP + +N A G F+ L+
Sbjct: 477 PFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKRP-DGEMNI-ASGCPRFV-AHSTLES 533
Query: 439 GRGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 534 AKNTYIKDDTLFLKVAV 550
Score = 176 (67.0 bits), Expect = 3.3e-25, Sum P(2) = 3.3e-25
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R+ C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYRCAFCRSVLHNPHQTGCGHRFCQDCILSLRELNAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCPYKQ-CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPT-SSFRNTSG 130
+RE+L + C C++++ + Y+ H+ C + Q E + + +
Sbjct: 99 CKREVLNLYVFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCREPVLRKDLKEHAS 158
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC 169
R K L +N+Q + EN C Y V C
Sbjct: 159 TYCQFREEKCLYCKKDVVVINLQ-NHEENL-CPEYPVSC 195
>UNIPROTKB|F5H1P7 [details] [associations]
symbol:TRAF5 "TNF receptor-associated factor 5"
species:9606 "Homo sapiens" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027130 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49599 EMBL:AL590101 HGNC:HGNC:12035
ChiTaRS:TRAF5 PANTHER:PTHR10131:SF23 IPI:IPI00982254
ProteinModelPortal:F5H1P7 SMR:F5H1P7 Ensembl:ENST00000427925
UCSC:uc010psy.2 ArrayExpress:F5H1P7 Bgee:F5H1P7 Uniprot:F5H1P7
Length = 451
Score = 205 (77.2 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 55/190 (28%), Positives = 97/190 (51%)
Query: 271 ERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-NGVYFWKMYNFPAKLKEMKE 329
+R+ +LE+ + +N + L + EE ++ C NG WK+ ++ K +E +
Sbjct: 258 QRLAVLEEETNKHDTHINIHKAQLSKNEE-RFKLLEGTCYNGKLIWKVTDYKMKKREAVD 316
Query: 330 INRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRI 385
+ +S FY+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+
Sbjct: 317 GHTVSIFSQSFYTSRCGYRLCARAYLNGDGSGRGSHLSLYFVVMRGEFDSLLQWPFRQRV 376
Query: 386 RFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLME 445
L+ S + +I + + D N SFKRP + +N A G F+ VL+ + ++
Sbjct: 377 TLMLLDQSGKKNIMETFKPDPNSSSFKRP-DGEMNI-ASGCPRFV-AHSVLENAKNAYIK 433
Query: 446 DDTFVIKTQV 455
DDT +K V
Sbjct: 434 DDTLFLKVAV 443
Score = 150 (57.9 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 27/88 (30%), Positives = 50/88 (56%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCPYKQ-CSSQLSIPEYE 99
+RE+L + C C++++ + Y+
Sbjct: 99 CKREVLNLYVYCSNAPGCNAKVILGRYQ 126
>UNIPROTKB|E2RR95 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
EMBL:AAEX03005087 EMBL:AAEX03005088 Ensembl:ENSCAFT00000019248
Uniprot:E2RR95
Length = 557
Score = 187 (70.9 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 56/197 (28%), Positives = 100/197 (50%)
Query: 265 LLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-NGVYFWKMYNFPAK 323
LL+ +R+V+LE + +N + L + EE ++ C NG WK+ ++ K
Sbjct: 357 LLETNDQRLVVLEGETNKHDAHINIHKAQLNKNEE-RFKLLEGACYNGKLIWKVTDYKMK 415
Query: 324 LKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDW 379
+E + + +S FY+S GYR C R ++ + + +LSL+ +++GE D +L W
Sbjct: 416 KREALDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQW 475
Query: 380 PFVGRIRFTALNTSSEFS-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
PF R+ L+ S + + I + ++D + SFKRP + +N A G F+ L+
Sbjct: 476 PFRQRVTLMLLDQSGKKNHIMETFKADPSSSSFKRP-DGEMNI-ASGCPRFV-AHSTLEN 532
Query: 439 GRGFLMEDDTFVIKTQV 455
+ ++DDT +K V
Sbjct: 533 AKNTYIKDDTVFLKVAV 549
Score = 157 (60.3 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 54/239 (22%), Positives = 108/239 (45%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R++C++C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYKCALCHSVLHNPHQTGCGHRFCQHCILSLRELNAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCPYKQ-CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI 131
+RE+L + C C++++ + Y+ + + + Q + P G+
Sbjct: 99 CKREVLNLYVYCKNAPGCNAKIILGRYQD-LGSLGWEPGQAAERHDCKGPCPKVL-AGGL 156
Query: 132 PT---NKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQAL----LEKHYD 184
T NK+ + + + + L +Q + EN C Y V C SQ + +++H
Sbjct: 157 ITLCRNKKQASLASTKLVVSSL-LQ-NHEENL-CPEYPVPCPNKC-SQIIPRTEVDEHLT 212
Query: 185 LKTSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKN 242
+ + F Y C+ + + H + ++ + + L KN + E ++ D K+
Sbjct: 213 VCPEAEQDCPFKHYGCTVKDKRGSLQEH--EHSALRDHMLLVLEKNLQLEEQISDLYKS 269
>UNIPROTKB|E1BTY1 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033209
"tumor necrosis factor-mediated signaling pathway" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=IEA] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005164 "tumor necrosis factor receptor binding" evidence=IEA]
[GO:0005174 "CD40 receptor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0043507
"positive regulation of JUN kinase activity" evidence=IEA]
[GO:0043623 "cellular protein complex assembly" evidence=IEA]
[GO:0046625 "sphingolipid binding" evidence=IEA] [GO:0051023
"regulation of immunoglobulin secretion" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0070207 "protein
homotrimerization" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0090073 "positive regulation of
protein homodimerization activity" evidence=IEA] [GO:2001238
"positive regulation of extrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0002218 "activation of innate immune response"
evidence=TAS] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=TAS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0051091 GO:GO:0046872 GO:GO:0008270
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070207
GO:GO:0002218 GO:GO:0004842 GO:GO:0007250 GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:2001238 GO:GO:0043623
SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0032743 GO:GO:0051023
GO:GO:0090073 GO:GO:0043507 Reactome:REACT_147795 GO:GO:0046625
GO:GO:0002726 GeneTree:ENSGT00550000074359 OMA:PSDGCTW
PANTHER:PTHR10131:SF21 EMBL:AADN02026991 IPI:IPI00600516
ProteinModelPortal:E1BTY1 Ensembl:ENSGALT00000014665 Uniprot:E1BTY1
Length = 527
Score = 220 (82.5 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 102/400 (25%), Positives = 167/400 (41%)
Query: 70 DNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTS 129
+ ++ RE E L C Y C S P+ ++H C P D
Sbjct: 149 ERHSERECPERTLNCKY--CKSLFYFPDIKAHDEVC------PKFPLTCDGC-----GKK 195
Query: 130 GIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSF 189
IP K F +H+ G PC+F VGC E+ +++ L E H +
Sbjct: 196 KIPREK----------FQDHVKNCGKCK--VPCRFKVVGCAEMVENEKLPE-HESKCLAE 242
Query: 190 HLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDP----NKNQAG 245
HL +L + S S S + H S+Q + ES+L+ + A
Sbjct: 243 HLYMLLSFVLSLKSGSGDL-KHLPAIPSSQSSSPLLAANSLCPESELFKSLELLGRCDAL 301
Query: 246 DDKSSEGD---CSCKTCGDNSHLLKLVYERMVLLEQSMLEQ-KIKVNNFE--LNLKQTE- 298
+ K+ + C + L Y R L+Q +E KV E + LK
Sbjct: 302 EKKTVTFENIVCVLNREVERVSLTAEAYSRQHRLDQEQIETLSNKVRQLERSIGLKDLAM 361
Query: 299 -EIED---NVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVN 353
E+E+ N+ +GV+ WK+ F K +E + + +S FY+S +GY+ C RV
Sbjct: 362 AEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYKMCLRVY 421
Query: 354 ISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDS 410
++ + +LSLF +++G ND +L WPF ++ L+ ++ I D + D S
Sbjct: 422 LNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRPDVTSSS 481
Query: 411 FKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
F+RPV +N A G F V+ V++ ++ +D F+
Sbjct: 482 FQRPVTE-MNI-ASGCPLFCPVS-VMEAKNSYVRDDAIFI 518
Score = 113 (44.8 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 31/103 (30%), Positives = 45/103 (43%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ I G C I E +L
Sbjct: 28 LEVKYLCSDCRNILRRPFQAQCGHRYCSYCLKKIIS-SGPQKCASCIQEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ C + C+ + +I EYES H C
Sbjct: 87 TSSAFPDNAARREVESLPAVCINEGCTWKGTIKEYESCHEGNC 129
>UNIPROTKB|E1B9D9 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001238 "positive regulation of extrinsic apoptotic
signaling pathway" evidence=IEA] [GO:0090073 "positive regulation
of protein homodimerization activity" evidence=IEA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA] [GO:0070207
"protein homotrimerization" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA] [GO:0046625 "sphingolipid binding"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005174 "CD40 receptor
binding" evidence=IEA] [GO:0005164 "tumor necrosis factor receptor
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0051091 GO:GO:0046872 GO:GO:0008270
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070207
GO:GO:0004842 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:2001238 GO:GO:0043623 SUPFAM:SSF49599
GO:GO:0035631 GO:GO:0032743 GO:GO:0051023 GO:GO:0090073
GO:GO:0043507 GO:GO:0046625 GO:GO:0002726
GeneTree:ENSGT00550000074359 OMA:PSDGCTW PANTHER:PTHR10131:SF21
EMBL:DAAA02032446 IPI:IPI00701156 ProteinModelPortal:E1B9D9
Ensembl:ENSBTAT00000013869 Uniprot:E1B9D9
Length = 525
Score = 209 (78.6 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 77/324 (23%), Positives = 139/324 (42%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDG--- 202
F +H+ G PC+F+ VGC E+ +S+ E H + HL LL G
Sbjct: 211 FQDHVRACGRCR--VPCRFHAVGCPEMVESEQQPE-HEAQRLQEHLALLLGVLLEAGRPP 267
Query: 203 --SQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDC-SCKTC 259
S+ P G + + L + + E K ++ E + + C
Sbjct: 268 GDSRLLLRPGEGALEAGTPSRVAELLQRCEALERKTATFENIVCVLNREVERVAVTAEAC 327
Query: 260 GDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYN 319
G H +L +R+ L + + + + +L + E+ + +GV+ WK+ +
Sbjct: 328 G-RQH--RLDQDRIEALSNKVQQLERSIGLKDLAMADLEQKVLEMEASTFDGVFIWKISD 384
Query: 320 FPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDD 375
F K +E + +S FY+S +GY+ C R ++ + +LSLF L++G +D
Sbjct: 385 FSRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMRGPHDA 444
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
+L WPF ++ L+ ++ + D + D SF+RPV +N A G F V+ +
Sbjct: 445 LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVGD-MNI-ASGCPLFCPVSKM 502
Query: 436 LDPGRGFLMEDDTFVIKTQVTEMT 459
+ + DD IK + ++T
Sbjct: 503 --EAKNSYVRDDAIFIKA-IVDLT 523
Score = 125 (49.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 30/103 (29%), Positives = 47/103 (45%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 37 LEDKYLCSACKNVLRRPFQAQCGHRYCSFCLSSILS-SGPQSCAACVHEGIYEEGVSILE 95
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ CP + CS + ++ +YES H C
Sbjct: 96 SSSAFPDNAARREVESLPAVCPSEGCSWKGTLKDYESCHEGQC 138
>UNIPROTKB|F6XG92 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF21
EMBL:AAEX03006742 Ensembl:ENSCAFT00000031062 Uniprot:F6XG92
Length = 499
Score = 199 (75.1 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 81/332 (24%), Positives = 148/332 (44%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKS--QALLEKHYDLKTSFHL---ELLFNKYCS 200
F +H+ G PC+F+ VGC E+ +S Q E H+ L+ + LL K+ S
Sbjct: 179 FQDHVRACGKCR--VPCRFHVVGCPEMVESEKQQQHEAHW-LREHLAMLLGSLLEAKHLS 235
Query: 201 D-GSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDK-----SSEGD- 253
G G + S EA L K E + + + A + + E +
Sbjct: 236 GAGGPFLGLSEMGGWEASTLHP-EAELSKAAELQQRCEALERKTATFENIVCVLNREVER 294
Query: 254 --CSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNG 311
+ + CG H +L +R+ L + + + + +L + + E+ + +G
Sbjct: 295 VAMTAEACG-RQH--QLDQDRIEALSNKVQQLERTIGLKDLAMAELEQKVHEMEASTFDG 351
Query: 312 VYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIH 367
V+ WK+ +F K +E + +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 352 VFIWKISDFARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFV 411
Query: 368 LVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
+++G ND +L WPF ++ L+ ++ + D + D SF+RPV+ +N A G
Sbjct: 412 VMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCP 469
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
F V+ + + + DD IK + ++T
Sbjct: 470 LFCPVSKM--EAKNSYVRDDAIFIKA-IVDLT 498
Score = 126 (49.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLTK 64
+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 12 EDKYLCSACRNVLRRPFQAQCGHRYCSYCLSSILSSSGPQNCAACVHEGIYEEGISILES 71
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ CP C+ + ++ EYES H C
Sbjct: 72 SSAFPDNAARREVESLPAVCPNNGCTWKGTLKEYESCHEGHC 113
>UNIPROTKB|F1PY23 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 CTD:7186 KO:K03173
PANTHER:PTHR10131:SF21 EMBL:AAEX03006742 RefSeq:XP_857289.1
Ensembl:ENSCAFT00000031061 GeneID:480673 KEGG:cfa:480673
Uniprot:F1PY23
Length = 501
Score = 204 (76.9 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 79/320 (24%), Positives = 143/320 (44%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKS--QALLEKHYDLKTSFHLELLFNKYCSDGS 203
F +H+ G PC+F+ VGC E+ +S Q E H+ L+ HL +L
Sbjct: 202 FQDHVRACGKCR--VPCRFHVVGCPEMVESEKQQQHEAHW-LRE--HLAMLLGSLLEAKH 256
Query: 204 QSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNS 263
S S + Q+ EA K E+ + N+ ++E CG
Sbjct: 257 LSGAELSKAAE---LQQRCEALERKTATFENIVCVLNREVERVAMTAEA------CG-RQ 306
Query: 264 HLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
H +L +R+ L + + + + +L + + E+ + +GV+ WK+ +F K
Sbjct: 307 H--QLDQDRIEALSNKVQQLERTIGLKDLAMAELEQKVHEMEASTFDGVFIWKISDFARK 364
Query: 324 LKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDW 379
+E + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L W
Sbjct: 365 RQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRW 424
Query: 380 PFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPG 439
PF ++ L+ ++ + D + D SF+RPV+ +N A G F V+ +
Sbjct: 425 PFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKM--EA 480
Query: 440 RGFLMEDDTFVIKTQVTEMT 459
+ + DD IK + ++T
Sbjct: 481 KNSYVRDDAIFIKA-IVDLT 499
Score = 119 (46.9 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLTK 64
+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 29 EDKYLCSACRNVLRRPFQAQCGHRYCSYCLSSILS-SGPQNCAACVHEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ CP C+ + ++ EYES H C
Sbjct: 88 SSAFPDNAARREVESLPAVCPNNGCTWKGTLKEYESCHEGHC 129
>UNIPROTKB|E2R6C7 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 PANTHER:PTHR10131:SF21 Ensembl:ENSCAFT00000031062
Uniprot:E2R6C7
Length = 502
Score = 204 (76.9 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 80/321 (24%), Positives = 144/321 (44%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKS--QALLEKHYDLKTSFHLELLFNKYCSDGS 203
F +H+ G PC+F+ VGC E+ +S Q E H+ L+ HL +L
Sbjct: 202 FQDHVRACGKCR--VPCRFHVVGCPEMVESEKQQQHEAHW-LRE--HLAMLLGSLLEAKH 256
Query: 204 QS-TNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDN 262
S P G + Q+ EA K E+ + N+ ++E CG
Sbjct: 257 LSGAGGPFLGLK---LQQRCEALERKTATFENIVCVLNREVERVAMTAEA------CG-R 306
Query: 263 SHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPA 322
H +L +R+ L + + + + +L + + E+ + +GV+ WK+ +F
Sbjct: 307 QH--QLDQDRIEALSNKVQQLERTIGLKDLAMAELEQKVHEMEASTFDGVFIWKISDFAR 364
Query: 323 KLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILD 378
K +E + +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L
Sbjct: 365 KRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLR 424
Query: 379 WPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDP 438
WPF ++ L+ ++ + D + D SF+RPV+ +N A G F V+ +
Sbjct: 425 WPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKM--E 480
Query: 439 GRGFLMEDDTFVIKTQVTEMT 459
+ + DD IK + ++T
Sbjct: 481 AKNSYVRDDAIFIKA-IVDLT 500
Score = 119 (46.9 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLTK 64
+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 29 EDKYLCSACRNVLRRPFQAQCGHRYCSYCLSSILS-SGPQNCAACVHEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ CP C+ + ++ EYES H C
Sbjct: 88 SSAFPDNAARREVESLPAVCPNNGCTWKGTLKEYESCHEGHC 129
>UNIPROTKB|Q12933 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032743 "positive
regulation of interleukin-2 production" evidence=IMP] [GO:0002726
"positive regulation of T cell cytokine production" evidence=IMP]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IMP] [GO:0050870 "positive regulation of T cell
activation" evidence=IC] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0070207 "protein homotrimerization"
evidence=IPI] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IDA] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IDA] [GO:0042981 "regulation of
apoptotic process" evidence=IDA] [GO:0046625 "sphingolipid binding"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA;TAS] [GO:2001238 "positive regulation of extrinsic
apoptotic signaling pathway" evidence=IMP] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031996 "thioesterase
binding" evidence=IPI] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP;IDA]
[GO:0005164 "tumor necrosis factor receptor binding" evidence=IPI]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=IMP] [GO:0004871 "signal transducer activity"
evidence=NAS] [GO:0006461 "protein complex assembly" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005174 "CD40 receptor binding" evidence=ISS]
[GO:0009898 "internal side of plasma membrane" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
[GO:0035631 "CD40 receptor complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_578 InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0005829 GO:GO:0005938
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0008270 EMBL:CH471090
Pathway_Interaction_DB:caspase_pathway GO:GO:0045087 GO:GO:0045121
GO:GO:0004871 GO:GO:0006919 GO:GO:0030163
Pathway_Interaction_DB:tnfpathway GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL355987 GO:GO:0070207
Pathway_Interaction_DB:ceramidepathway GO:GO:0033209 GO:GO:0004842
GO:GO:0007250 Pathway_Interaction_DB:hivnefpathway GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:0051865 GO:GO:2001238
Pathway_Interaction_DB:trail_pathway GO:GO:0043623
Pathway_Interaction_DB:p38_mkk3_6pathway SUPFAM:SSF49599
GO:GO:0050870 GO:GO:0035631 PDB:3M0A PDB:3M0D PDBsum:3M0A
PDBsum:3M0D GO:GO:0032743 GO:GO:0005174 GO:GO:0051023 GO:GO:0090073
GO:GO:0043507 GO:GO:0034351 GO:GO:0046625 GO:GO:0002726
CleanEx:HS_TRAF2 PDB:1CA9 PDBsum:1CA9 PDB:1D0A PDBsum:1D0A PDB:1CZZ
PDB:1D00 PDBsum:1CZZ PDBsum:1D00 PDB:1D01 PDBsum:1D01 PDB:1D0J
PDBsum:1D0J PDB:1F3V PDBsum:1F3V eggNOG:NOG264247
HOGENOM:HOG000231558 HOVERGEN:HBG058222 EMBL:U12597 EMBL:AK054686
EMBL:AK289722 EMBL:AK298370 EMBL:BX538160 EMBL:AY623660
EMBL:AL449425 EMBL:BC032410 EMBL:BC033810 EMBL:BC043492
EMBL:BC064662 IPI:IPI00030278 IPI:IPI00292635 IPI:IPI00970911
IPI:IPI00970988 PIR:S56163 RefSeq:NP_066961.2 UniGene:Hs.522506
PDB:1CA4 PDB:1CZY PDB:1QSC PDB:3KNV PDB:3M06 PDBsum:1CA4
PDBsum:1CZY PDBsum:1QSC PDBsum:3KNV PDBsum:3M06
ProteinModelPortal:Q12933 SMR:Q12933 DIP:DIP-6223N IntAct:Q12933
MINT:MINT-107429 STRING:Q12933 PhosphoSite:Q12933 DMDM:23503103
PaxDb:Q12933 PRIDE:Q12933 DNASU:7186 Ensembl:ENST00000247668
Ensembl:ENST00000359662 Ensembl:ENST00000536468 GeneID:7186
KEGG:hsa:7186 UCSC:uc004cjv.3 UCSC:uc010nbw.3 UCSC:uc011mek.2
CTD:7186 GeneCards:GC09P139776 H-InvDB:HIX0169360 HGNC:HGNC:12032
HPA:CAB004603 HPA:HPA009972 HPA:HPA010634 MIM:601895
neXtProt:NX_Q12933 PharmGKB:PA164742666 InParanoid:Q12933 KO:K03173
OMA:PSDGCTW EvolutionaryTrace:Q12933 GenomeRNAi:7186 NextBio:28172
ArrayExpress:Q12933 Bgee:Q12933 Genevestigator:Q12933
GermOnline:ENSG00000127191 PANTHER:PTHR10131:SF21 Uniprot:Q12933
Length = 501
Score = 196 (74.1 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 75/319 (23%), Positives = 143/319 (44%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQS 205
F +H+ G PC+F+ +GC E + + E HL +L + +
Sbjct: 202 FQDHVKTCGKCR--VPCRFHAIGCLETVEGEKQQEHEVQWLRE-HLAMLLSSVL-EAKPL 257
Query: 206 TNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL 265
SH + + E+ K E+ + N+ ++E CS + D +
Sbjct: 258 LGDQSHAGSELLQR--CESLEKKTATFENIVCVLNREVERVAMTAEA-CSRQHRLDQDKI 314
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK 325
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +
Sbjct: 315 -EALSSKVQQLERSIGLKDLAMADLE---QKVLEMEASTY----DGVFIWKISDFARKRQ 366
Query: 326 EMKEINRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWP 380
E R +S FY+S +GY+ C R+ ++ + +LSLF +++G ND +L WP
Sbjct: 367 EAVA-GRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWP 425
Query: 381 FVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGR 440
F ++ L+ ++ + D + D SF+RPVN +N A G F V+ + +
Sbjct: 426 FNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVND-MNI-ASGCPLFCPVSKM--EAK 481
Query: 441 GFLMEDDTFVIKTQVTEMT 459
+ DD IK + ++T
Sbjct: 482 NSYVRDDAIFIKA-IVDLT 499
Score = 123 (48.4 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 31/109 (28%), Positives = 49/109 (44%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 28 LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILS-SGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ 111
F DN RRE+ CP C+ + ++ EYES H C L ++
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTE 135
>UNIPROTKB|F1RVZ4 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001238 "positive regulation of extrinsic apoptotic
signaling pathway" evidence=IEA] [GO:0090073 "positive regulation
of protein homodimerization activity" evidence=IEA] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA] [GO:0070207
"protein homotrimerization" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0051023 "regulation of immunoglobulin
secretion" evidence=IEA] [GO:0046625 "sphingolipid binding"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=IEA] [GO:0031996 "thioesterase binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005174 "CD40 receptor
binding" evidence=IEA] [GO:0005164 "tumor necrosis factor receptor
binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0002726 "positive regulation of T cell
cytokine production" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005737 GO:GO:0051091 GO:GO:0046872 GO:GO:0008270
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0070207
GO:GO:0004842 GO:GO:0007250 GO:GO:0009898 InterPro:IPR017907
GO:GO:0070534 GO:GO:2001238 GO:GO:0043623 SUPFAM:SSF49599
GO:GO:0035631 GO:GO:0032743 GO:GO:0051023 GO:GO:0090073
GO:GO:0043507 GO:GO:0046625 GO:GO:0002726
GeneTree:ENSGT00550000074359 OMA:PSDGCTW PANTHER:PTHR10131:SF21
EMBL:FP236151 ProteinModelPortal:F1RVZ4 Ensembl:ENSSSCT00000006417
Uniprot:F1RVZ4
Length = 533
Score = 200 (75.5 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 82/329 (24%), Positives = 141/329 (42%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYC----SD 201
F +H+ G PC+F+ VGC E+ +S+ E H + HL LL + S
Sbjct: 215 FQDHVRTCGRCR--VPCRFHAVGCPEMVESEKQQE-HEAQRLREHLGLLLGVFLEARPSP 271
Query: 202 GS------QSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDC- 254
G QS + G K E L + + E K ++ E
Sbjct: 272 GGGQPFLGQSEGSWEGGGPGLGPSKAAEL-LQRCEALERKTATFENIVCVLNREVERVAM 330
Query: 255 SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF 314
+ + CG H +L +R+ L + + + + +L + E+ + +GV+
Sbjct: 331 TAEACG-RQH--RLDQDRIEALSNKVQQLERSIGLKDLAVADLEQKVQELQASTFDGVFI 387
Query: 315 WKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQ 370
WK+ +F K +E +S FY+S +GY+ C R ++ + +LSLF L++
Sbjct: 388 WKISDFARKRQEAVAGRAPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLFFVLMK 447
Query: 371 GENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFI 430
G ND +L WPF ++ L+ ++ + D + D + SF+RPV +N A G F
Sbjct: 448 GPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVSSSSFQRPVGD-MNI-ASGCPLFC 505
Query: 431 RVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
V+ + R + DD IK + ++T
Sbjct: 506 PVSRM--EARSSYVRDDAIFIKA-IVDLT 531
Score = 119 (46.9 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 29/103 (28%), Positives = 46/103 (44%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ + + G C + E +L
Sbjct: 41 LEDKYLCSACRNVLRRPFQAQCGHRYCSYCLSNILS-SGPQNCAACVHEGIYEEGVSILE 99
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ CP C+ + ++ EYES H C
Sbjct: 100 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGHC 142
Score = 39 (18.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 82 LTCPYKQCSSQ-LSIPEYESHVNTC 105
LTC C + +S +++ HV TC
Sbjct: 200 LTCD--GCGKKKISREKFQDHVRTC 222
>ZFIN|ZDB-GENE-030131-5735 [details] [associations]
symbol:traf6 "TNF receptor-associated factor 6"
species:7955 "Danio rerio" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0045672 "positive regulation of osteoclast
differentiation" evidence=IEA] [GO:0050852 "T cell receptor
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISS] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0031666
"positive regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0046849 "bone
remodeling" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=IEA] [GO:0048468 "cell development"
evidence=IEA] [GO:0070498 "interleukin-1-mediated signaling
pathway" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009617 "response to bacterium" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009615 "response to virus" evidence=IDA]
[GO:0045087 "innate immune response" evidence=IMP]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027139 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-030131-5735
GO:GO:0005737 GO:GO:0007165 GO:GO:0045893 GO:GO:0009617
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0009615 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 CTD:7189 eggNOG:NOG289765
HOGENOM:HOG000006625 HOVERGEN:HBG060248 KO:K03175 OrthoDB:EOG4320XV
PANTHER:PTHR10131:SF48 EMBL:AY616583 EMBL:AL929208 EMBL:BC055214
EMBL:BC171483 EMBL:BC171487 IPI:IPI00610824 RefSeq:NP_001038217.1
UniGene:Dr.74618 ProteinModelPortal:Q6IWL4 SMR:Q6IWL4 STRING:Q6IWL4
Ensembl:ENSDART00000038273 GeneID:554561 KEGG:dre:554561
InParanoid:Q7SXX1 OMA:NECGAVM NextBio:20880774 Bgee:Q6IWL4
Uniprot:Q6IWL4
Length = 542
Score = 270 (100.1 bits), Expect = 9.0e-21, P = 9.0e-21
Identities = 96/380 (25%), Positives = 163/380 (42%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ ++EC ICL L+ A+ T CGH+FC +CI I G+ CP+D +VL ++ +F DN+
Sbjct: 65 LESKYECPICLMGLRSAVQTPCGHRFCDSCIRKSIRDTGQK-CPVDNEVLLEEQLFPDNF 123
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIP 132
+REIL + C CS ++ + + E H++ C + P + P S
Sbjct: 124 AKREILSLTVKCSNFGCSEKMELRQLEKHLSQCRFA-TAPCPQCQESVPISHLDEHKSQH 182
Query: 133 TNKRNSKILTVT-VFPEHLNMQGSSNENFPCKFYQVGCR----EVFKSQALLEKHYD-LK 186
+R I+T + ++E F C F C E+ + Q L D LK
Sbjct: 183 CLQR---IMTCPDCAGSFVYAVKQNHEQF-CPFANTVCEYCEMELIRDQLALHCDTDCLK 238
Query: 187 TSFHLELLFNKY-CSDGSQSTNTPSHGRQDTS-NQKEIEAYLMKNKEHESKLWDPNKNQA 244
+ F+ + C + H ++ T + + + +L + + + +
Sbjct: 239 AP--VACTFSTFGCREKMTRNELAQHMQEFTQMHMRYMAEFLRSQTLNNCTMPSAAAHLS 296
Query: 245 GDDKS----SEGDCSCKTCGDNSHLLKLVYE---RMVLLEQSMLE-------QKIKVNNF 290
DD+ S C CK + +L + V E R+V +Q + E QK +V
Sbjct: 297 SDDRGASARSPDSCQCKQ--ELLNLRETVLELEGRLVRQDQQIRELCIHNDTQKNQVTEL 354
Query: 291 ELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR--YFYSACFYSSCFGYRF 348
L EE + + G+Y W++ NF L+ +E + +S FY+ GY+
Sbjct: 355 RRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRN-QEAGQPIVLHSPPFYTGRPGYKL 413
Query: 349 CTRVNISREDAQYLSLFIHL 368
C R+++ A S FI L
Sbjct: 414 CLRLHLQTPSAPRCSNFISL 433
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 63/233 (27%), Positives = 107/233 (45%)
Query: 240 NKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYE---RMVLLEQSMLE-------QKIKVNN 289
+ + G S C CK + +L + V E R+V +Q + E QK +V
Sbjct: 296 SSDDRGASARSPDSCQCKQ--ELLNLRETVLELEGRLVRQDQQIRELCIHNDTQKNQVTE 353
Query: 290 FELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINR--YFYSACFYSSCFGYR 347
L EE + + G+Y W++ NF L+ +E + +S FY+ GY+
Sbjct: 354 LRRKLVSLEESTRELEAQQYQGIYVWRVENFSHHLRN-QEAGQPIVLHSPPFYTGRPGYK 412
Query: 348 FCTRVNISREDA----QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQ 403
C R+++ A ++SLF+H +QGE D L WP G IR L+ + ++
Sbjct: 413 LCLRLHLQTPSAPRCSNFISLFVHTMQGEFDSQLSWPLQGTIRLAVLDQVEGQHHIEVME 472
Query: 404 SDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+ + +F+RP N K FG+ F+ + + RGF+ ED +++ +VT
Sbjct: 473 TKPDLQAFQRPT-VMRNPKGFGYVTFLHLQALRQ--RGFVKED-VLLVRCEVT 521
>UNIPROTKB|J9NS71 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 OMA:PSDGCTW
PANTHER:PTHR10131:SF21 EMBL:AAEX03006742 Ensembl:ENSCAFT00000049927
Uniprot:J9NS71
Length = 523
Score = 199 (75.1 bits), Expect = 9.8e-21, Sum P(2) = 9.8e-21
Identities = 81/332 (24%), Positives = 148/332 (44%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKS--QALLEKHYDLKTSFHL---ELLFNKYCS 200
F +H+ G PC+F+ VGC E+ +S Q E H+ L+ + LL K+ S
Sbjct: 202 FQDHVRACGKCR--VPCRFHVVGCPEMVESEKQQQHEAHW-LREHLAMLLGSLLEAKHLS 258
Query: 201 D-GSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDK-----SSEGD- 253
G G + S EA L K E + + + A + + E +
Sbjct: 259 GAGGPFLGLSEMGGWEASTLHP-EAELSKAAELQQRCEALERKTATFENIVCVLNREVER 317
Query: 254 --CSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNG 311
+ + CG H +L +R+ L + + + + +L + + E+ + +G
Sbjct: 318 VAMTAEACG-RQH--QLDQDRIEALSNKVQQLERTIGLKDLAMAELEQKVHEMEASTFDG 374
Query: 312 VYFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIH 367
V+ WK+ +F K +E + +S FY+S +GY+ C R+ ++ + +LSLF
Sbjct: 375 VFIWKISDFARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFV 434
Query: 368 LVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
+++G ND +L WPF ++ L+ ++ + D + D SF+RPV+ +N A G
Sbjct: 435 VMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCP 492
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
F V+ + + + DD IK + ++T
Sbjct: 493 LFCPVSKM--EAKNSYVRDDAIFIKA-IVDLT 521
Score = 119 (46.9 bits), Expect = 9.8e-21, Sum P(2) = 9.8e-21
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLTK 64
+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 29 EDKYLCSACRNVLRRPFQAQCGHRYCSYCLSSILS-SGPQNCAACVHEGIYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ CP C+ + ++ EYES H C
Sbjct: 88 SSAFPDNAARREVESLPAVCPNNGCTWKGTLKEYESCHEGHC 129
>UNIPROTKB|E1BBH2 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
CTD:7187 KO:K03174 OMA:YGCTFQG PANTHER:PTHR10131:SF45
EMBL:DAAA02053290 IPI:IPI00716910 RefSeq:NP_001192515.1
UniGene:Bt.18290 Ensembl:ENSBTAT00000017918 GeneID:506182
KEGG:bta:506182 NextBio:20867485 Uniprot:E1BBH2
Length = 568
Score = 191 (72.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 91/388 (23%), Positives = 176/388 (45%)
Query: 82 LTCPYKQCSSQLSI-PEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI--PTNKRNS 138
++CP+K CS Q + E +H++ C + PS T SF+ + TN++
Sbjct: 202 VSCPHK-CSVQTLLRSELSAHLSECV---NAPS--------TCSFKRYGCVFQGTNQQ-I 248
Query: 139 KILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY 198
K + +H+N+ + + K + V K++++ H + SF +E+ K
Sbjct: 249 KAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-CSFEIEIERQKE 307
Query: 199 CSDGSQSTNTPSHGRQDTSNQK--EIEAYLMKNKEHESKLWDPNKN--QAGDDKSSEGDC 254
++S D+ +K E++ + +++ + D K+ ++ ++ +E +
Sbjct: 308 MLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEA-DSMKSSVESLQNRVTELES 366
Query: 255 SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF 314
K+ G + L+ ++ +Q + I++ + +L + E NGV
Sbjct: 367 VDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETAS-------YNGVLI 419
Query: 315 WKMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
WK+ ++ + +E K ++ YS FY+ FGY+ C RV ++ + +LSLF +
Sbjct: 420 WKIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVI 477
Query: 369 VQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
++GE D +L WPF ++ ++ SS + D + D N SFK+P +N A G
Sbjct: 478 MRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCP 535
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 536 VFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 129 (50.5 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC C+ + + C ++V+ KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCSPKQTECGHRFCETCMGALLSSSSPK-CTACQEVIIKDKVFKDNC 105
Query: 73 TRREILENNLTCPY--KQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIFCRNEGRGCTEQLALGHLLVHLKNDC 141
>MGI|MGI:101835 [details] [associations]
symbol:Traf2 "TNF receptor-associated factor 2" species:10090
"Mus musculus" [GO:0002726 "positive regulation of T cell cytokine
production" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005164 "tumor necrosis factor receptor binding"
evidence=ISO] [GO:0005174 "CD40 receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005938 "cell cortex" evidence=ISO] [GO:0006461
"protein complex assembly" evidence=ISO] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IDA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0009898
"internal side of plasma membrane" evidence=IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0031435 "mitogen-activated protein kinase kinase kinase
binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0031996 "thioesterase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=ISO] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=ISO] [GO:0034351 "negative regulation of glial
cell apoptotic process" evidence=ISO] [GO:0035631 "CD40 receptor
complex" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=NAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043507 "positive regulation of JUN kinase activity"
evidence=ISO] [GO:0043623 "cellular protein complex assembly"
evidence=IDA] [GO:0045121 "membrane raft" evidence=ISO] [GO:0046328
"regulation of JNK cascade" evidence=IDA] [GO:0046625 "sphingolipid
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051023 "regulation of immunoglobulin secretion"
evidence=IMP] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0051291 "protein heterooligomerization"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0070207 "protein homotrimerization" evidence=ISO]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=ISO] [GO:2001238 "positive regulation of
extrinsic apoptotic signaling pathway" evidence=ISO]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027133 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:101835 Pfam:PF00097 Prosite:PS00518
GO:GO:0005938 GO:GO:0006915 GO:GO:0043066 GO:GO:0046872
GO:GO:0008270 GO:GO:0045121 GO:GO:0030163 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL732590 GO:GO:0070207
GO:GO:0033209 GO:GO:0004842 GO:GO:0007250 GO:GO:0009898
InterPro:IPR017907 GO:GO:0070534 GO:GO:0051865 GO:GO:2001238
GO:GO:0043623 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0032743
GO:GO:0051023 GO:GO:0090073 GO:GO:0043507 GO:GO:0034351
GO:GO:0046625 GO:GO:0002726 eggNOG:NOG264247 HOGENOM:HOG000231558
HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359 CTD:7186 KO:K03173
OMA:PSDGCTW PANTHER:PTHR10131:SF21 EMBL:L35303 EMBL:AF027570
EMBL:AF233332 EMBL:AF233326 EMBL:AF233327 EMBL:AF233328
EMBL:AF233329 EMBL:AF233330 EMBL:AF233331 EMBL:BC003801
IPI:IPI00135901 IPI:IPI00271450 PIR:I61512 RefSeq:NP_033448.2
UniGene:Mm.3399 ProteinModelPortal:P39429 SMR:P39429 DIP:DIP-468N
IntAct:P39429 MINT:MINT-197749 STRING:P39429 PhosphoSite:P39429
PaxDb:P39429 PRIDE:P39429 Ensembl:ENSMUST00000028311
Ensembl:ENSMUST00000114234 GeneID:22030 KEGG:mmu:22030
UCSC:uc008isl.1 InParanoid:A2AJA3 OrthoDB:EOG4R502J NextBio:301780
Bgee:P39429 CleanEx:MM_TRAF2 Genevestigator:P39429
GermOnline:ENSMUSG00000026942 Uniprot:P39429
Length = 501
Score = 195 (73.7 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 76/318 (23%), Positives = 150/318 (47%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQS 205
F +H+ + S C+F+ VGC E+ +++ L + H + HL LL + + + S
Sbjct: 202 FQDHV--RACSKCRVLCRFHTVGCSEMVETENL-QDHELQRLREHLALLLSSFL-EAQAS 257
Query: 206 TNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHL 265
T + + + +I K E+ + N+ ++E CS + D +
Sbjct: 258 PGTLNQVGPELLQRCQILE--QKIATFENIVCVLNREVERVAVTAEA-CSRQHRLDQDKI 314
Query: 266 LKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLK 325
+ + ++ LE+S+ + + + + E ++ E+E + +GV+ WK+ +F K +
Sbjct: 315 -EALSNKVQQLERSIGLKDLAMADLE---QKVSELE----VSTYDGVFIWKISDFTRKRQ 366
Query: 326 E-MKEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + +S FY+S +GY+ C RV ++ + +LSLF +++G ND +L WPF
Sbjct: 367 EAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPF 426
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRG 441
++ L+ ++ + D + D SF+RPV+ +N A G F V+ + +
Sbjct: 427 NQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKM--EAKN 482
Query: 442 FLMEDDTFVIKTQVTEMT 459
+ DD IK + ++T
Sbjct: 483 SYVRDDAIFIKA-IVDLT 499
Score = 122 (48.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-----YCPIDEK---VLTK 64
L+ ++ CS C L+ CGH++C+ C+ S + +N Y + E+ +L
Sbjct: 28 LEAKYLCSACKNILRRPFQAQCGHRYCSFCLTSILSSGPQNCAACVYEGLYEEGISILES 87
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
F DN RRE+ CP C+ + ++ EYES H C
Sbjct: 88 SSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLC 129
>UNIPROTKB|F1NMN9 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0002224 "toll-like receptor
signaling pathway" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0030162 "regulation of proteolysis" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031996 "thioesterase binding" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0035631 "CD40
receptor complex" evidence=IEA] [GO:0050688 "regulation of defense
response to virus" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
OMA:YGCTFQG PANTHER:PTHR10131:SF45 EMBL:AADN02003763
EMBL:AADN02003761 EMBL:AADN02003762 IPI:IPI00820500
Ensembl:ENSGALT00000037491 Uniprot:F1NMN9
Length = 549
Score = 181 (68.8 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 90/387 (23%), Positives = 175/387 (45%)
Query: 82 LTCPYKQCSSQ-LSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSG-IPTNKRNSK 139
++CP+K CS + L E +H++ C + PS + F+ T+ I ++ +S
Sbjct: 183 VSCPHK-CSVKTLMRSELNAHLSECI---NAPSTCSFKRYGCT-FQGTNQQIKAHEASSA 237
Query: 140 ILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYC 199
+ V + E N + EN K + + K++++ H + SF +E+ K
Sbjct: 238 VQHVNLLKEWSN----ALEN---KVALLQNESLEKNKSIQTLHNQI-CSFEIEIERQKEM 289
Query: 200 SDGSQSTNTPSHGRQDTSNQK--EIEAYLMKNKEHESKLWDPNKN--QAGDDKSSEGDCS 255
++S D+ +K E++ + +++ + D K+ ++ ++ +E +
Sbjct: 290 LRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEA-DSMKSSVESLQNRVTELESV 348
Query: 256 CKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFW 315
KT G + ++ ++ +Q + I++ + +L + E NGV W
Sbjct: 349 DKTAGQGARNTSMLETQLSRHDQMLSVHDIRLADMDLRFQVLETAS-------YNGVLIW 401
Query: 316 KMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLV 369
K+ ++ + +E K ++ YS FY+ FGY+ C RV ++ + +LSLF ++
Sbjct: 402 KIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIM 459
Query: 370 QGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNN 428
+GE D +L WPF ++ ++ S + D + D N SFK+P +N A G
Sbjct: 460 RGEYDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPV 517
Query: 429 FIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 518 FV-AQTVLE--NGTYIKDDTIFIKVIV 541
Score = 137 (53.3 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+++ + C ++ + KD +F DN
Sbjct: 28 VEDKYKCEKCHFILCNPKQTECGHRFCETCMNALLSTPSPK-CTACQESIVKDKVFKDNC 86
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
RRE+L + C K C QLS+ + H+ T
Sbjct: 87 CRRELLALQIYCRNENKGCKEQLSLGQLLMHLKT 120
>UNIPROTKB|B1AMX9 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0046328
"regulation of JNK cascade" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL355987
InterPro:IPR017907 SUPFAM:SSF49599 HOGENOM:HOG000231558
HOVERGEN:HBG058222 EMBL:AL449425 UniGene:Hs.522506 HGNC:HGNC:12032
PANTHER:PTHR10131:SF21 IPI:IPI00384922 SMR:B1AMX9
Ensembl:ENST00000371645 UCSC:uc010nbv.1 Uniprot:B1AMX9
Length = 422
Score = 180 (68.4 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 53/211 (25%), Positives = 101/211 (47%)
Query: 254 CSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVY 313
C CG + + +L +++ L + + + + +L + E+ + +GV+
Sbjct: 218 CRAPCCG--ADVKRLDQDKIEALSSKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVF 275
Query: 314 FWKMYNFPAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHL 368
WK+ +F K +E R +S FY+S +GY+ C R+ ++ + +LSLF +
Sbjct: 276 IWKISDFARKRQEAVA-GRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVV 334
Query: 369 VQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNN 428
++G ND +L WPF ++ L+ ++ + D + D SF+RPVN +N A G
Sbjct: 335 MKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVND-MNI-ASGCPL 392
Query: 429 FIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
F V+ + + + DD IK + ++T
Sbjct: 393 FCPVSKM--EAKNSYVRDDAIFIKA-IVDLT 420
Score = 132 (51.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 36/140 (25%), Positives = 61/140 (43%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 28 LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILS-SGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTS 123
F DN RRE+ CP C+ + ++ EYE + C + P+V SP S
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYEVKMPACGMVTEAPAVGSRPRSP-S 145
Query: 124 SFRNTSGIPTNKRNSKILTV 143
S+ +P + +++V
Sbjct: 146 SYDLVLHVPLTGAEACLMSV 165
>ZFIN|ZDB-GENE-071120-4 [details] [associations]
symbol:traf1 "TNF receptor-associated factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027136 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-071120-4 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
CTD:7185 eggNOG:NOG264247 HOGENOM:HOG000231558 HOVERGEN:HBG058222
KO:K03172 OrthoDB:EOG42Z4Q6 PANTHER:PTHR10131:SF29
GeneTree:ENSGT00550000074359 EMBL:CR376844 IPI:IPI00866427
RefSeq:NP_001121853.1 UniGene:Dr.134981 Ensembl:ENSDART00000101174
GeneID:100148503 KEGG:dre:100148503 OMA:DHLENGC NextBio:20792131
Uniprot:B0UXK1
Length = 551
Score = 175 (66.7 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 45/184 (24%), Positives = 94/184 (51%)
Query: 276 LEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYF- 334
L+Q ++ + I +++ + ++ +++ +G ++W++ + K +E +
Sbjct: 374 LQQRLVRKDILISSLQQSISAQQDVS-------YDGTFYWRVCDVSQKQREAANSQKISQ 426
Query: 335 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
YS FY++ +G++ C R+ ++ + A ++SLF +++GE D IL WPF ++ F L+
Sbjct: 427 YSPAFYTARYGFKVCLRLYLNGDGAGKGSHISLFFVIMKGEYDPILSWPFKHKVTFFLLD 486
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 451
+ + D + D + SF +PV+ +N A G F + + P + +DDT I
Sbjct: 487 QNQREHVIDAFRPDLSSMSFHQPVSD-MNV-ASGCPLFFPLKKLRSPKHAYC-KDDTIYI 543
Query: 452 KTQV 455
K V
Sbjct: 544 KCVV 547
Score = 124 (48.7 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 39/148 (26%), Positives = 64/148 (43%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWI-----DV-----KGKNY-CPIDEKVLTK 64
++ CS C L A T CGH++C AC++ W+ D+ KG++ D VLT
Sbjct: 39 KYLCSNCNNVLNKARQTVCGHRYCLACVN-WLVRNNKDLVCTKCKGEDSNVESDTSVLTP 97
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVED--ITDSPT 122
+ F D +EIL+ + C + C + ++ +E H + C ++ + T
Sbjct: 98 NQFFNDVAINKEILDLKVHCANQGCPWRSTLKNFEDHQSQCEYALIPCNIGCGIMVQRKT 157
Query: 123 SSFRNTSGIPTNKRNSKILTVTVFPEHL 150
+ SG P NK T + P L
Sbjct: 158 LATHLESGCPNNKTACPSCTSVLTPREL 185
Score = 57 (25.1 bits), Expect = 3.0e-20, Sum P(3) = 3.0e-20
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQA-LLEKHYDLKTSFHLELLFN 196
N +S + PC F VGC FK +++H + HL+LL +
Sbjct: 208 NQPANSKKKEPCIFSDVGCP--FKGNPDKVKEHESCSHAGHLQLLLD 252
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 150 LN-MQGSSNEN-FPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYC 199
LN + + +EN +P F Q C EV K + L ++ + ++YC
Sbjct: 11 LNGVSSTPDENEYPSGFPQSICDEVPKDKYLCSNCNNVLNKARQTVCGHRYC 62
>UNIPROTKB|Q13114 [details] [associations]
symbol:TRAF3 "TNF receptor-associated factor 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0030162 "regulation of proteolysis" evidence=IMP] [GO:0033209
"tumor necrosis factor-mediated signaling pathway" evidence=IMP]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001817 "regulation of cytokine production" evidence=ISS]
[GO:0032648 "regulation of interferon-beta production"
evidence=ISS] [GO:0050688 "regulation of defense response to virus"
evidence=ISS] [GO:0002224 "toll-like receptor signaling pathway"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0006917
"induction of apoptosis" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0008063 "Toll signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS]
[GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS]
[GO:0035666 "TRIF-dependent toll-like receptor signaling pathway"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
[GO:0009898 "internal side of plasma membrane" evidence=ISS]
[GO:0035631 "CD40 receptor complex" evidence=ISS]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027128 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 GO:GO:0005829 GO:GO:0005739 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0006917 GO:GO:0046872 GO:GO:0005768
GO:GO:0008270 GO:GO:0030162 GO:GO:0045087 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0032088 GO:GO:0033209
GO:GO:0004842 EMBL:AL117209 GO:GO:0009898 InterPro:IPR017907
GO:GO:0008063 GO:GO:0034138 GO:GO:0034142 GO:GO:0035666
GO:GO:0032480 SUPFAM:SSF49599 GO:GO:0035631 CleanEx:HS_CAP1
GO:GO:0050688 Gene3D:3.90.890.10 GO:GO:0032648 PDB:1KZZ PDB:1L0A
PDBsum:1KZZ PDBsum:1L0A Orphanet:1930 PDB:1RF3 PDBsum:1RF3 PDB:1FLL
PDBsum:1FLL HOVERGEN:HBG058222 EMBL:U15637 EMBL:U19260 EMBL:L38509
EMBL:U21092 EMBL:BX247977 EMBL:AK303172 EMBL:BC075087 EMBL:BC075086
EMBL:AF110908 IPI:IPI00297473 IPI:IPI00973170 PIR:A55960 PIR:S68467
RefSeq:NP_001186356.1 RefSeq:NP_003291.2 RefSeq:NP_663777.1
RefSeq:NP_663778.1 UniGene:Hs.510528 PDB:1FLK PDB:1ZMS PDB:2ECY
PDB:2GKW PDBsum:1FLK PDBsum:1ZMS PDBsum:2ECY PDBsum:2GKW
ProteinModelPortal:Q13114 SMR:Q13114 DIP:DIP-6222N IntAct:Q13114
MINT:MINT-1144408 STRING:Q13114 PhosphoSite:Q13114 DMDM:116242824
PaxDb:Q13114 PRIDE:Q13114 Ensembl:ENST00000392745
Ensembl:ENST00000539721 Ensembl:ENST00000560371 GeneID:7187
KEGG:hsa:7187 UCSC:uc001ymc.2 UCSC:uc010txy.2 CTD:7187
GeneCards:GC14P103243 HGNC:HGNC:12033 HPA:HPA002933 MIM:601896
MIM:614849 neXtProt:NX_Q13114 PharmGKB:PA36710 eggNOG:NOG239194
InParanoid:Q13114 KO:K03174 OMA:YGCTFQG OrthoDB:EOG4JWVD7
PhylomeDB:Q13114 ChiTaRS:TRAF3 EvolutionaryTrace:Q13114
GenomeRNAi:7187 NextBio:28176 PMAP-CutDB:Q13114 ArrayExpress:Q13114
Bgee:Q13114 CleanEx:HS_TRAF3 Genevestigator:Q13114
GermOnline:ENSG00000131323 PANTHER:PTHR10131:SF45 Uniprot:Q13114
Length = 568
Score = 190 (71.9 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 91/388 (23%), Positives = 176/388 (45%)
Query: 82 LTCPYKQCSSQLSI-PEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI--PTNKRNS 138
++CP+K CS Q + E +H++ C + PS T SF+ + TN++
Sbjct: 202 VSCPHK-CSVQTLLRSELSAHLSECV---NAPS--------TCSFKRYGCVFQGTNQQ-I 248
Query: 139 KILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY 198
K + +H+N+ + + K + V K++++ H + SF +E+ K
Sbjct: 249 KAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-CSFEIEIERQKE 307
Query: 199 CSDGSQSTNTPSHGRQDTSNQK--EIEAYLMKNKEHESKLWDPNKN--QAGDDKSSEGDC 254
++S D+ +K E++ + +++ + D K+ ++ ++ +E +
Sbjct: 308 MLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEA-DSMKSSVESLQNRVTELES 366
Query: 255 SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF 314
K+ G + L+ ++ +Q + I++ + +L + E NGV
Sbjct: 367 VDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETAS-------YNGVLI 419
Query: 315 WKMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
WK+ ++ + +E K ++ YS FY+ FGY+ C RV ++ + +LSLF +
Sbjct: 420 WKIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVI 477
Query: 369 VQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
++GE D +L WPF ++ ++ SS + D + D N SFK+P +N A G
Sbjct: 478 MRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCP 535
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 536 VFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 125 (49.1 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDNC 105
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL + H+ N C+ +
Sbjct: 106 CKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFE 144
>MGI|MGI:108041 [details] [associations]
symbol:Traf3 "TNF receptor-associated factor 3" species:10090
"Mus musculus" [GO:0001817 "regulation of cytokine production"
evidence=IMP] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009898 "internal side of plasma
membrane" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0030162
"regulation of proteolysis" evidence=ISO;IDA;IMP] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0031996
"thioesterase binding" evidence=ISO] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0032648 "regulation of interferon-beta
production" evidence=IMP] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=ISO;IMP] [GO:0035631
"CD40 receptor complex" evidence=IDA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050688 "regulation of defense response to virus"
evidence=IMP] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 EMBL:U33840 MGI:MGI:108041
Prosite:PS00518 GO:GO:0006915 GO:GO:0042981 GO:GO:0046872
GO:GO:0005768 GO:GO:0008270 GO:GO:0030162 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0032088 GO:GO:0033209 GO:GO:0004842
EMBL:CH466549 GO:GO:0009898 InterPro:IPR017907 SUPFAM:SSF49599
GO:GO:0002224 GO:GO:0035631 GO:GO:0050688 Gene3D:3.90.890.10
PDB:4GHU PDBsum:4GHU GO:GO:0032648 HOVERGEN:HBG058222
GeneTree:ENSGT00550000074359 CTD:7187 eggNOG:NOG239194 KO:K03174
OMA:YGCTFQG OrthoDB:EOG4JWVD7 PANTHER:PTHR10131:SF45 EMBL:U21050
EMBL:BC137634 EMBL:BC137635 IPI:IPI00310635 PIR:I49272
RefSeq:NP_035762.2 UniGene:Mm.27431 ProteinModelPortal:Q60803
SMR:Q60803 DIP:DIP-34050N IntAct:Q60803 MINT:MINT-1506326
STRING:Q60803 PhosphoSite:Q60803 PaxDb:Q60803 PRIDE:Q60803
Ensembl:ENSMUST00000021706 GeneID:22031 KEGG:mmu:22031
HOGENOM:HOG000231557 InParanoid:B2RPW3 NextBio:301784 Bgee:Q60803
CleanEx:MM_TRAF3 Genevestigator:Q60803
GermOnline:ENSMUSG00000021277 Uniprot:Q60803
Length = 567
Score = 191 (72.3 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 91/388 (23%), Positives = 176/388 (45%)
Query: 82 LTCPYKQCSSQLSI-PEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI--PTNKRNS 138
++CP+K CS Q + E +H++ C + PS T SF+ + TN++
Sbjct: 201 VSCPHK-CSVQTLLRSELSAHLSECV---NAPS--------TCSFKRYGCVFQGTNQQ-I 247
Query: 139 KILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY 198
K + +H+N+ + + K + V K++++ H + SF +E+ K
Sbjct: 248 KAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-CSFEIEIERQKE 306
Query: 199 CSDGSQSTNTPSHGRQDTSNQK--EIEAYLMKNKEHESKLWDPNKN--QAGDDKSSEGDC 254
++S D+ +K E++ + +++ + D K+ ++ ++ +E +
Sbjct: 307 MLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEA-DSMKSSVESLQNRVTELES 365
Query: 255 SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF 314
K+ G + L+ ++ +Q + I++ + +L + E NGV
Sbjct: 366 VDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETAS-------YNGVLI 418
Query: 315 WKMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
WK+ ++ + +E K ++ YS FY+ FGY+ C RV ++ + +LSLF +
Sbjct: 419 WKIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVI 476
Query: 369 VQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
++GE D +L WPF ++ ++ SS + D + D N SFK+P +N A G
Sbjct: 477 MRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCP 534
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 535 VFV-AQTVLE--NGTYIKDDTIFIKVIV 559
Score = 123 (48.4 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 27/96 (28%), Positives = 49/96 (51%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDNC 104
Query: 73 TRREILENNLTCPY--KQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 105 CKREILALQVYCRNEGRGCAEQLTLGHLLVHLKNEC 140
>UNIPROTKB|F1SA11 [details] [associations]
symbol:LOC100156979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0035631 "CD40 receptor complex" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
OMA:YGCTFQG PANTHER:PTHR10131:SF45 EMBL:CT998550
Ensembl:ENSSSCT00000002804 Ensembl:ENSSSCT00000034942
Uniprot:F1SA11
Length = 568
Score = 191 (72.3 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 91/388 (23%), Positives = 176/388 (45%)
Query: 82 LTCPYKQCSSQLSI-PEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI--PTNKRNS 138
++CP+K CS Q + E +H++ C + PS T SF+ + TN++
Sbjct: 202 VSCPHK-CSVQTLLRSELSAHLSECV---NAPS--------TCSFKRYGCVFQGTNQQ-I 248
Query: 139 KILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY 198
K + +H+N+ + + K + V K++++ H + SF +E+ K
Sbjct: 249 KAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-CSFEIEIERQKE 307
Query: 199 CSDGSQSTNTPSHGRQDTSNQK--EIEAYLMKNKEHESKLWDPNKN--QAGDDKSSEGDC 254
++S D+ +K E++ + +++ + D K+ ++ ++ +E +
Sbjct: 308 MLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEA-DSMKSSVESLQNRVTELES 366
Query: 255 SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF 314
K+ G + L+ ++ +Q + I++ + +L + E NGV
Sbjct: 367 VDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETAS-------YNGVLI 419
Query: 315 WKMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
WK+ ++ + +E K ++ YS FY+ FGY+ C RV ++ + +LSLF +
Sbjct: 420 WKIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVI 477
Query: 369 VQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
++GE D +L WPF ++ ++ SS + D + D N SFK+P +N A G
Sbjct: 478 MRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCP 535
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 536 VFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 123 (48.4 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIVKDKVFKDNC 105
Query: 73 TRREILENNLTCPY--KQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNEGRGCAEQLTLGHLLVHLKNDC 141
>UNIPROTKB|K7GKN5 [details] [associations]
symbol:LOC100156979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0001817 "regulation of cytokine production"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF45 EMBL:CT998550 Ensembl:ENSSSCT00000033228
Uniprot:K7GKN5
Length = 543
Score = 189 (71.6 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 94/410 (22%), Positives = 181/410 (44%)
Query: 59 EKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNT-C-YLKYSQPSVED 116
EKVL KD + ++ + TC + C SQ+ + + H +T C + S P
Sbjct: 155 EKVLRKD---LRDHVEKACKYREATCSH--CKSQVPMITLQKHEDTECPCVVVSCPHKCS 209
Query: 117 ITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQ 176
+ S N I ++ +S + +H+N+ + + K + V K++
Sbjct: 210 VQTLLRSEGTNQQ-IKAHEASSAV-------QHVNLLKEWSNSLEKKVSLLQNESVEKNK 261
Query: 177 ALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQK--EIEAYLMKNKEHES 234
++ H + SF +E+ K ++S D+ +K E++ + +++
Sbjct: 262 SIQSLHNQI-CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWE 320
Query: 235 KLWDPNKN--QAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFEL 292
+ D K+ ++ ++ +E + K+ G + L+ ++ +Q + I++ + +L
Sbjct: 321 EA-DSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDL 379
Query: 293 NLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFC 349
+ E NGV WK+ ++ + +E K ++ YS FY+ FGY+ C
Sbjct: 380 RFQVLETAS-------YNGVLIWKIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMC 430
Query: 350 TRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSD 405
RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D + D
Sbjct: 431 ARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD 490
Query: 406 KNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFK+P +N A G F+ VL+ G ++DDT IK V
Sbjct: 491 PNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 123 (48.4 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIVKDKVFKDNC 105
Query: 73 TRREILENNLTCPY--KQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNEGRGCAEQLTLGHLLVHLKNDC 141
>UNIPROTKB|F1NLM1 [details] [associations]
symbol:F1NLM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007165 "signal transduction" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031996 "thioesterase
binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR027136 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
PANTHER:PTHR10131:SF29 GeneTree:ENSGT00550000074359 OMA:DHLENGC
EMBL:AADN02026377 EMBL:AADN02026378 IPI:IPI00590143
Ensembl:ENSGALT00000002404 Uniprot:F1NLM1
Length = 504
Score = 195 (73.7 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 71/317 (22%), Positives = 145/317 (45%)
Query: 140 ILTVT-VFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY 198
++T T + +HL S + C+F +VGC S+ +++H H+ LL +Y
Sbjct: 196 LMTGTFMLSDHLRASSVSMDG--CRFSEVGC-SFGGSKEKIKEHEKAAVGTHMLLLL-QY 251
Query: 199 CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKT 258
+ T S +Q E+ ++NK H + N+ + + E +
Sbjct: 252 IKQLKANLCTVSKAANGFISQTELN---LENKLHVFENIVAVLNKEVETSNLEITAFRRQ 308
Query: 259 CGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMY 318
+ ++++ + ++ L + ++ ++ +L +E+ +GV+ WK+
Sbjct: 309 SELDQNVIRGLELKIAELHHCLTQKDAGLSRLHKSLVFSEQTS-------YDGVFLWKIT 361
Query: 319 NFPAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGEN 373
+ KL++ R YS FY++ +GY+ C R+ ++ + ++SLF +++G+
Sbjct: 362 DVNQKLQD-SVTGRVVSLYSPAFYTAKYGYKVCLRIYLNGDGMGKGTHVSLFFVVMKGDY 420
Query: 374 DDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVA 433
D +L WPF ++ F L+ ++ I D + D SF+RPVN +N A G F+ +
Sbjct: 421 DALLPWPFRHKVTFMLLDQNNREHIIDAFRPDLASASFQRPVND-MNV-ASGCPTFLPLT 478
Query: 434 DVLDPGRGFLMEDDTFV 450
+ P ++ ED F+
Sbjct: 479 KLQSPKHAYVKEDTLFL 495
Score = 115 (45.5 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 33/103 (32%), Positives = 50/103 (48%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YC-------P--IDE-KVL 62
+ ++ CS C LK A+ T CGH++C+AC+ SWI KN C P + E +L
Sbjct: 29 EQKYLCSNCNNVLKKALQTLCGHRYCSACL-SWIVRNNKNPVCQKCKEEDPSTLSEGSLL 87
Query: 63 TKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
++ F D +EI E + C CS ++ +E H C
Sbjct: 88 AEERAFGDAAINKEISELRVHCVTLGCSWCGTMKNFEEHQILC 130
Score = 47 (21.6 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 80 NNLTCPYKQCSSQLSIPEYESH 101
NN+T +K C LS EY+ H
Sbjct: 160 NNVTVCHK-CKQSLSSSEYQPH 180
>UNIPROTKB|E2RG86 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050688 "regulation of defense response to
virus" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=IEA] [GO:0032648 "regulation of interferon-beta
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030162 "regulation of
proteolysis" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=IEA] [GO:0002224 "toll-like receptor signaling pathway"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008063 "Toll
signaling pathway" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027128
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009898 InterPro:IPR017907
SUPFAM:SSF49599 GO:GO:0002224 GO:GO:0035631 GO:GO:0050688
Gene3D:3.90.890.10 GO:GO:0032648 GeneTree:ENSGT00550000074359
CTD:7187 KO:K03174 OMA:YGCTFQG PANTHER:PTHR10131:SF45
EMBL:AAEX03006032 RefSeq:XP_854615.1 ProteinModelPortal:E2RG86
Ensembl:ENSCAFT00000028719 GeneID:490867 KEGG:cfa:490867
NextBio:20863803 Uniprot:E2RG86
Length = 568
Score = 191 (72.3 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 91/388 (23%), Positives = 176/388 (45%)
Query: 82 LTCPYKQCSSQLSI-PEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI--PTNKRNS 138
++CP+K CS Q + E +H++ C + PS T SF+ + TN++
Sbjct: 202 VSCPHK-CSVQTLLRSELSAHLSECV---NAPS--------TCSFKRYGCVFQGTNQQ-I 248
Query: 139 KILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY 198
K + +H+N+ + + K + V K++++ H + SF +E+ K
Sbjct: 249 KAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQI-CSFEIEIERQKE 307
Query: 199 CSDGSQSTNTPSHGRQDTSNQK--EIEAYLMKNKEHESKLWDPNKN--QAGDDKSSEGDC 254
++S D+ +K E++ + +++ + D K+ ++ ++ +E +
Sbjct: 308 MLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEA-DSMKSSVESLQNRVTELES 366
Query: 255 SCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYF 314
K+ G + L+ ++ +Q + I++ + +L + E NGV
Sbjct: 367 VDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETAS-------YNGVLI 419
Query: 315 WKMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
WK+ ++ + +E K ++ YS FY+ FGY+ C RV ++ + +LSLF +
Sbjct: 420 WKIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVI 477
Query: 369 VQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
++GE D +L WPF ++ ++ SS + D + D N SFK+P +N A G
Sbjct: 478 MRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCP 535
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 536 VFV-AQTVLE--NGTYIKDDTIFIKVIV 560
Score = 121 (47.7 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCNPKQTECGHRFCETCMAAVLSSSSPK-CTACQESIIKDKVFKDNC 105
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNEGGGCTEQLTLGHLLVHLKNDC 141
>ZFIN|ZDB-GENE-040801-257 [details] [associations]
symbol:traf3 "TNF receptor-associated factor 3"
species:7955 "Danio rerio" [GO:0001817 "regulation of cytokine
production" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0050688
"regulation of defense response to virus" evidence=IEA] [GO:0008063
"Toll signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0045087 "innate
immune response" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-040801-257 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359 CTD:7187
eggNOG:NOG239194 KO:K03174 OMA:YGCTFQG OrthoDB:EOG4JWVD7
PANTHER:PTHR10131:SF45 HOGENOM:HOG000231557 EMBL:BX511189
EMBL:CR392327 EMBL:BC077157 IPI:IPI00499408 RefSeq:NP_001003513.1
UniGene:Dr.81587 SMR:Q6DEG0 STRING:Q6DEG0
Ensembl:ENSDART00000031458 Ensembl:ENSDART00000123200 GeneID:445119
KEGG:dre:445119 InParanoid:Q6DEG0 NextBio:20831882 Uniprot:Q6DEG0
Length = 573
Score = 178 (67.7 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 55/208 (26%), Positives = 95/208 (45%)
Query: 253 DCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGV 312
D SC SH L + +++ + M +++ +L L+ E NG
Sbjct: 370 DSSCVNSASGSHTLASLEQQLTRHDDLMSVHDVRLAEMDLKLQVLETAS-------FNGT 422
Query: 313 YFWKMYNFPAKLKE-MKEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSLFIHL 368
WK+ ++ + +E + YS FY+ FGY+ C RV ++ + +LSLF +
Sbjct: 423 LIWKIRDYKRRKQEAVVSKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVV 482
Query: 369 VQGENDDILDWPFVGRIRFTALNTS-SEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFN 427
++GE D +L WPF ++ ++ + + D + D + SF+RP +N A G
Sbjct: 483 MRGEYDALLQWPFKQKVTLMLMDQGPARKHLGDAFKPDPSSSSFRRPTGE-MNI-ASGCP 540
Query: 428 NFIRVADVLDPGRGFLMEDDTFVIKTQV 455
F+ VL+ G ++DDT IK V
Sbjct: 541 LFV-AQTVLE--NGTYIKDDTIFIKVTV 565
Score = 133 (51.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYT 73
+P++ C C L + T CGH+FC +CI+ + K CP D L +D IF D
Sbjct: 51 EPKYCCETCRLVLCNPRQTECGHRFCESCINELLS-KPNPVCPADLLPLFEDKIFRDVCC 109
Query: 74 RREILENNLTCPYKQ--CSSQLSIPEYESHVNTC-YLKYSQP 112
REI+ + C ++ C Q+ + + H+ C Y + P
Sbjct: 110 NREIMALKVYCRSEKNGCKEQMCLQQVMEHLVICPYFEVPCP 151
>UNIPROTKB|K7GLK8 [details] [associations]
symbol:LOC100156979 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0033209 "tumor necrosis factor-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0001817 "regulation of cytokine production"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF45 EMBL:CT998550 Ensembl:ENSSSCT00000034635
Uniprot:K7GLK8
Length = 512
Score = 180 (68.4 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 79/332 (23%), Positives = 148/332 (44%)
Query: 150 LNMQGSSNENFPCKF----YQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQS 205
+ +Q + PC ++ + + +S+ L ++ ++ + ++ L N+ CS +
Sbjct: 187 ITLQKHEDTECPCVVVSCPHKCSVQTLLRSEVSLLQNESVEKNKSIQSLHNQICSFEIEI 246
Query: 206 TNTPSHGRQDTSN----QKEIEAYLMKNKEHESKL--WDPNKNQAGDDKSS--------- 250
R + S Q+ I++ K KE + ++ + N +A KSS
Sbjct: 247 ERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVT 306
Query: 251 EGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCN 310
E + K+ G + L+ ++ +Q + I++ + +L + E N
Sbjct: 307 ELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETAS-------YN 359
Query: 311 GVYFWKMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISRED---AQYLSL 364
GV WK+ ++ + +E K ++ YS FY+ FGY+ C RV ++ + +LSL
Sbjct: 360 GVLIWKIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSL 417
Query: 365 FIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSDKNFDSFKRPVNFFLNKKA 423
F +++GE D +L WPF ++ ++ SS + D + D N SFK+P +N A
Sbjct: 418 FFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGE-MNI-A 475
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
G F+ VL+ G ++DDT IK V
Sbjct: 476 SGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 504
Score = 123 (48.4 bits), Expect = 5.2e-19, Sum P(2) = 5.2e-19
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCRLVLCNPKQTECGHRFCETCMAALLSSSSPK-CTACQEGIVKDKVFKDNC 105
Query: 73 TRREILENNLTCPY--KQCSSQLSIPEYESHV-NTC 105
+REIL + C + C+ QL++ H+ N C
Sbjct: 106 CKREILALQIYCRNEGRGCAEQLTLGHLLVHLKNDC 141
>ZFIN|ZDB-GENE-030131-5345 [details] [associations]
symbol:traf2b "Tnf receptor-associated factor 2b"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0007250 "activation of NF-kappaB-inducing kinase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=IEA] [GO:0046328 "regulation of JNK cascade"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
ZFIN:ZDB-GENE-030131-5345 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF21 EMBL:BX294186
IPI:IPI00773417 Ensembl:ENSDART00000074731 Uniprot:E9QI92
Length = 532
Score = 186 (70.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 74/318 (23%), Positives = 139/318 (43%)
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKE 221
C+F ++GCR V + ++H HL L+ S + G + Q++
Sbjct: 227 CQFREIGCRAVVDN-CKQQEHEQTSIMEHLRLMLALL-----SSMRLRAEGAGEW--QED 278
Query: 222 IEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKT--CGDNSHLLKLVYERMVLLEQS 279
+ L + E N + G + + + C N + + + Q
Sbjct: 279 VGLGLYRGPEDAPPAGAHNVGRGGGPGVQKKVTTLENIVCVLNKEVERSALTMEAISRQH 338
Query: 280 MLEQKIKVNNFELNLKQTE-----------EIEDNV-VLKLC--NGVYFWKMYNFPAKLK 325
L+Q+ K+ N ++Q E E E ++ L+ C +GV+ WK+ F + +
Sbjct: 339 RLDQE-KIENLSNKVRQLERTLTTRDLQLAESEQSLRELQFCTYDGVFIWKIAEFSRRRQ 397
Query: 326 EMKEINR-YFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
+ +S FYSS +GY+ C R+ ++ + +LSLF +++G+ D +L WPF
Sbjct: 398 DAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMKGKYDALLKWPF 457
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRG 441
++ L+ ++ I D + D + SF+RP++ +N A G F +A + G+
Sbjct: 458 SQKVTLMLLDQNNREHIIDAFRPDVSSTSFQRPISE-MNI-ASGCPLFCPLAKLA--GKS 513
Query: 442 FLMEDDTFVIKTQVTEMT 459
+ DDT IK + ++T
Sbjct: 514 SYLRDDTIFIKA-IVDLT 530
Score = 112 (44.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 29/105 (27%), Positives = 48/105 (45%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP-------IDEK--V 61
++++P+++C C + L+ CGH+FC C + G C +E+ V
Sbjct: 37 VSMEPKYQCQQCKDILRKPFQAQCGHRFCVFCFKQ-LTSSGPIPCEACRAEGIFEEETSV 95
Query: 62 LTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
L F DN RREI CP + CS ++ ++E+ H C
Sbjct: 96 LNIAVAFPDNAARREIDSLPAKCPNEGCSWSGTLKDFENQHEGRC 140
>ZFIN|ZDB-GENE-040308-1 [details] [associations]
symbol:traf4a "tnf receptor-associated factor 4a"
species:7955 "Danio rerio" [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040308-1 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
eggNOG:NOG321306 HSSP:Q12933 GeneTree:ENSGT00550000074359
HOGENOM:HOG000004841 HOVERGEN:HBG103438 KO:K09848 OrthoDB:EOG4868C9
PANTHER:PTHR10131:SF46 EMBL:CR855391 EMBL:CR848661 EMBL:BC065969
EMBL:AJ556548 IPI:IPI00486500 RefSeq:NP_991325.1 UniGene:Dr.81750
SMR:Q7T1K2 Ensembl:ENSDART00000016024 GeneID:404045 KEGG:dre:404045
CTD:404045 InParanoid:Q7T1K2 OMA:TECPKRT NextBio:20817516
Uniprot:Q7T1K2
Length = 470
Score = 165 (63.1 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 42/154 (27%), Positives = 83/154 (53%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISRE---DAQYLSLF 365
+GV WK+ ++ KL+E K N + F+S FY+ +GY+ ++ + +LS++
Sbjct: 307 DGVLIWKLTDYSRKLQEAKLRNNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSIY 366
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSS-EFS----ITDEIQSDKNFDSFKRPVNF--F 418
I ++ GE D++L+WPF ++ F+ L+ S S IT+ D N+ +F++P +
Sbjct: 367 IRVLPGEYDNLLEWPFSYKVTFSILDQSDPSLSKPQHITETFNPDPNWKNFQKPCSSRNS 426
Query: 419 LNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
L++ FG+ FI ++ R ++ ++ F+
Sbjct: 427 LDESTLGFGYPKFISHEEIKK--RNYIRDNSIFL 458
Score = 128 (50.1 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 25/93 (26%), Positives = 51/93 (54%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
RF+C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RFQCPLCSKAMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
++IL + C + + C + + +SH +TC
Sbjct: 74 QQILALPIRCIHSEEGCRWTGQMKQLQSHFSTC 106
Score = 46 (21.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 73 TRREILEN-NLTCPYKQ-----CSSQLSIPEYESHVNTC 105
TRR++ E+ CP ++ C S+ + YE+H C
Sbjct: 122 TRRDLPEHLQHDCPKRKVKCEFCGSEFTGEAYENHQGIC 160
Score = 41 (19.5 bits), Expect = 3.2e-18, Sum P(3) = 3.2e-18
Identities = 17/52 (32%), Positives = 19/52 (36%)
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKH 182
IP R S LT PEHL C+F C F +A E H
Sbjct: 111 IPCPNRCSVKLTRRDLPEHLQ-HDCPKRKVKCEF----CGSEFTGEAY-ENH 156
>ZFIN|ZDB-GENE-071120-3 [details] [associations]
symbol:traf5 "Tnf receptor-associated factor 5"
species:7955 "Danio rerio" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027130 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-071120-3 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23 EMBL:AL954145
EMBL:CABZ01066660 IPI:IPI00899574 Ensembl:ENSDART00000040550
Uniprot:F1QV00
Length = 512
Score = 163 (62.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 61/291 (20%), Positives = 122/291 (41%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ +F C C + + T CGH FCA C+ ++ + G + CP+D + ++IF DN
Sbjct: 35 LEQQFICPSCGGIVLNPHQTGCGHIFCAQCVKAYTENGGSSKCPLDSIPIKPEEIFQDNC 94
Query: 73 TRREILENNLTCPYK-QCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI 131
+RE+L + C +C+ + S+ + H+ C + + S D +D +N
Sbjct: 95 CKRELLNLEVFCTNAPECTQRFSLCNLQDHLKACPHERVRCSHSDCSDIVLR--KNLLEH 152
Query: 132 PTNKRNSKILTVTVFPEHLNM-QGSSNENFPCKFYQV----GCREVFKSQALLEKHYDLK 186
N + ++ T ++ + Q ++ C +V C ++ K L + H D
Sbjct: 153 QRNACSYRLETCHYCRQNFPVSQMMGHQKSSCPDVEVPCSNNCTQMIKRHQL-QAHADEC 211
Query: 187 TSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLWDPNKNQAGD 246
+ ++ Y G T G+ E A++ E +KL + D
Sbjct: 212 LEVETDCVYKNY---GC--TVRDKRGKVQVHENTEFSAHVRLVLESNTKLEKQMEQLQQD 266
Query: 247 DKSSEGDCSCKTCGDNS--HLLKLVYERMVLLEQSMLEQKIKVNNFELNLK 295
+G K+ +S + L + L++S+ EQ++++ + + L+
Sbjct: 267 MLVQQGVLKDKSLVVSSLDRDVSLCDNTLTTLQRSVEEQRVRICSVQRELR 317
Score = 127 (49.8 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 41/150 (27%), Positives = 70/150 (46%)
Query: 285 IKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSSCF 344
I V + N ++ ++E + +G WK+ ++ + KE S+ FY+S
Sbjct: 370 IHVEQLQCNEQRLRQLESSSY----DGKLIWKVRDYWHR----KESGAALSSSPFYTSRS 421
Query: 345 GYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFS-ITD 400
GY+ R + + + ++SL+I +++G+ D L WPF I T L+ S + ++
Sbjct: 422 GYKLSVRAYLGGDGSGRGSHMSLYITIMRGDFDSFLPWPFRQNITLTLLDQSGTRNHMSH 481
Query: 401 EIQSDKNFDSFKRPVNFFLNKKAFGFNNFI 430
D N DSF RP + A GF FI
Sbjct: 482 TFIPDVNSDSFHRPTSDA--NVATGFTRFI 509
>UNIPROTKB|E2QYH9 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 OMA:EAFESHE PANTHER:PTHR10131:SF46
EMBL:AAEX03006670 EMBL:AAEX03006669 Ensembl:ENSCAFT00000029849
Uniprot:E2QYH9
Length = 458
Score = 158 (60.7 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 44/164 (26%), Positives = 85/164 (51%)
Query: 294 LKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRV 352
L++ E+E+ V +GV WK+ ++ +L+E K + N +S FY+ +GY+
Sbjct: 292 LQERRELEELSVGS--DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVYA 349
Query: 353 NISREDAQ--YLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDS 410
+ + +LSL+I ++ G D++L+WPF R+ F+ L+ S + D N+
Sbjct: 350 FLMHGSGEGTHLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDP-----ALHPDPNWKD 404
Query: 411 FKRPVNF--FLNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
F++P + L++ + FG+ FI D+ R ++ +D F+
Sbjct: 405 FQKPGTWRGSLDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 446
Score = 116 (45.9 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTC 105
++L + C + + + S P +SH+NTC
Sbjct: 74 VQVLSLAIRCIHSEEGCRWSGPLRHLQSHLNTC 106
>UNIPROTKB|F6RJL7 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=IEA] [GO:0050699 "WW domain
binding" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030323 "respiratory tube development"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0007585 "respiratory gaseous exchange" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 GO:GO:0046330
GO:GO:0045860 GO:GO:0007585 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073
Gene3D:3.90.890.10 GO:GO:0030323 GeneTree:ENSGT00550000074359
OMA:EAFESHE PANTHER:PTHR10131:SF46 EMBL:DAAA02048606
IPI:IPI00686516 UniGene:Bt.8676 ProteinModelPortal:F6RJL7
Ensembl:ENSBTAT00000056164 Uniprot:F6RJL7
Length = 470
Score = 159 (61.0 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 41/154 (26%), Positives = 81/154 (52%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ ++ + +LSL+
Sbjct: 307 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 366
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNF--F 418
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 367 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 426
Query: 419 LNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
L++ + FG+ FI D+ R ++ +D F+
Sbjct: 427 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
Score = 112 (44.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
++L ++ C + + C + + H+NTC
Sbjct: 74 VQVLGLSIRCIHSEEGCRWNGPLRHLQGHLNTC 106
>UNIPROTKB|Q9BUZ4 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030323 "respiratory tube development" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005923 "tight junction" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045860 "positive regulation of protein kinase
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IDA]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=IDA] [GO:0050699 "WW domain binding"
evidence=IPI] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0003677 "DNA
binding" evidence=TAS] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0006915 GO:GO:0007165 GO:GO:0042981
GO:GO:0005856 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0046330 GO:GO:0045860 GO:GO:0005923 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 GO:GO:0030323 EMBL:AC010761 EMBL:X80200
EMBL:AF082185 EMBL:AY937224 EMBL:DQ323999 EMBL:BC001769
IPI:IPI00017037 IPI:IPI00162088 PIR:I38026 RefSeq:NP_004286.2
UniGene:Hs.8375 PDB:2EOD PDB:2YUC PDBsum:2EOD PDBsum:2YUC
ProteinModelPortal:Q9BUZ4 SMR:Q9BUZ4 IntAct:Q9BUZ4 MINT:MINT-107471
STRING:Q9BUZ4 PhosphoSite:Q9BUZ4 DMDM:30580636 PaxDb:Q9BUZ4
PeptideAtlas:Q9BUZ4 PRIDE:Q9BUZ4 DNASU:9618 Ensembl:ENST00000262395
Ensembl:ENST00000262396 GeneID:9618 KEGG:hsa:9618 UCSC:uc002hcq.1
UCSC:uc002hcs.3 CTD:9618 GeneCards:GC17P027071 HGNC:HGNC:12034
HPA:CAB009055 MIM:602464 neXtProt:NX_Q9BUZ4 PharmGKB:PA36711
HOGENOM:HOG000004841 HOVERGEN:HBG103438 InParanoid:Q9BUZ4 KO:K09848
OMA:EAFESHE OrthoDB:EOG4868C9 ChiTaRS:TRAF4
EvolutionaryTrace:Q9BUZ4 GenomeRNAi:9618 NextBio:36083
ArrayExpress:Q9BUZ4 Bgee:Q9BUZ4 CleanEx:HS_TRAF4
Genevestigator:Q9BUZ4 GermOnline:ENSG00000076604
PANTHER:PTHR10131:SF46 Uniprot:Q9BUZ4
Length = 470
Score = 159 (61.0 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 41/154 (26%), Positives = 81/154 (52%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ ++ + +LSL+
Sbjct: 307 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 366
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNF--F 418
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 367 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 426
Query: 419 LNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
L++ + FG+ FI D+ R ++ +D F+
Sbjct: 427 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
Score = 110 (43.8 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTC 105
++L + C + + + S P + H+NTC
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTC 106
Score = 47 (21.6 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 53 NYCPIDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
N CP+ K+ +D + + + + + L C + C S YESH C
Sbjct: 115 NRCPM--KLSRRD---LPAHLQHDCPKRRLKCEF--CGCDFSGEAYESHEGMC 160
>MGI|MGI:1202880 [details] [associations]
symbol:Traf4 "TNF receptor associated factor 4"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030323
"respiratory tube development" evidence=IMP] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0031996 "thioesterase
binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO] [GO:0046330 "positive regulation of
JNK cascade" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050699 "WW domain binding" evidence=ISO]
[GO:0090073 "positive regulation of protein homodimerization
activity" evidence=ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 MGI:MGI:1202880
Pfam:PF00097 Prosite:PS00518 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0006915 GO:GO:0007165
GO:GO:0042981 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0046330 GO:GO:0045860 GO:GO:0005923 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH466596
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 EMBL:AL591070 GO:GO:0030323
GeneTree:ENSGT00550000074359 CTD:9618 HOGENOM:HOG000004841
HOVERGEN:HBG103438 KO:K09848 OMA:EAFESHE OrthoDB:EOG4868C9
PANTHER:PTHR10131:SF46 EMBL:X92346 EMBL:AF233449 EMBL:AK035056
EMBL:AK040877 EMBL:AK053900 IPI:IPI00264492 RefSeq:NP_033449.2
UniGene:Mm.390418 ProteinModelPortal:Q61382 SMR:Q61382
STRING:Q61382 PhosphoSite:Q61382 PRIDE:Q61382 DNASU:22032
Ensembl:ENSMUST00000017530 GeneID:22032 KEGG:mmu:22032
InParanoid:Q8BHD9 NextBio:301790 Bgee:Q61382 CleanEx:MM_TRAF4
Genevestigator:Q61382 GermOnline:ENSMUSG00000017386 Uniprot:Q61382
Length = 470
Score = 157 (60.3 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 40/154 (25%), Positives = 81/154 (52%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ ++ + +LS++
Sbjct: 307 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSIY 366
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNF--F 418
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 367 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 426
Query: 419 LNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
L++ + FG+ FI D+ R ++ +D F+
Sbjct: 427 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
Score = 110 (43.8 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTC 105
++L + C + + + S P + H+NTC
Sbjct: 74 VQVLGLAIRCIHSEEGCRWSGPLRHLQGHLNTC 106
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 53 NYCPIDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
N CP K+ +D + + + + + L C + C S YESH C
Sbjct: 115 NRCPA--KLSRRD---LPAHLQHDCPKRRLKCEF--CGCDFSGEAYESHEGVC 160
>RGD|1306708 [details] [associations]
symbol:Traf4 "Tnf receptor associated factor 4" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0007585
"respiratory gaseous exchange" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0030323 "respiratory tube development"
evidence=IEA;ISO] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0031996 "thioesterase binding"
evidence=IEA;ISO] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISO] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA;ISO] [GO:0050699 "WW domain binding"
evidence=IEA;ISO] [GO:0090073 "positive regulation of protein
homodimerization activity" evidence=IEA;ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 RGD:1306708 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 GO:GO:0046330 GO:GO:0045860 GO:GO:0007585
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH473948
InterPro:IPR017907 SUPFAM:SSF49599 GO:GO:0090073 Gene3D:3.90.890.10
eggNOG:NOG321306 GO:GO:0030323 GeneTree:ENSGT00550000074359
CTD:9618 HOGENOM:HOG000004841 HOVERGEN:HBG103438 KO:K09848
OMA:EAFESHE OrthoDB:EOG4868C9 PANTHER:PTHR10131:SF46 EMBL:BC162047
IPI:IPI00869573 RefSeq:NP_001100487.1 UniGene:Rn.3219 SMR:B1WC90
STRING:B1WC90 Ensembl:ENSRNOT00000018468 GeneID:303285
KEGG:rno:303285 NextBio:651050 Genevestigator:B1WC90 Uniprot:B1WC90
Length = 470
Score = 157 (60.3 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 40/154 (25%), Positives = 81/154 (52%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ ++ + +LS++
Sbjct: 307 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSIY 366
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNF--F 418
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 367 IRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 426
Query: 419 LNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
L++ + FG+ FI D+ R ++ +D F+
Sbjct: 427 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 458
Score = 110 (43.8 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTC 105
++L + C + + + S P + H+NTC
Sbjct: 74 VQVLGLAIRCIHSEEGCRWSGPLRHLQGHLNTC 106
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 53 NYCPIDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
N CP K+ +D + + + + + L C + C S YESH C
Sbjct: 115 NRCPA--KLSRRD---LPAHLQHDCPKRRLKCEF--CGCDFSGEAYESHEGVC 160
>ZFIN|ZDB-GENE-040305-2 [details] [associations]
symbol:traf4b "tnf receptor-associated factor 4b"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046330 "positive regulation of JNK cascade" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-040305-2 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 eggNOG:NOG321306 HSSP:Q12933
GeneTree:ENSGT00550000074359 HOGENOM:HOG000004841
HOVERGEN:HBG103438 OrthoDB:EOG4868C9 PANTHER:PTHR10131:SF46
EMBL:CU463284 EMBL:BC078361 EMBL:AJ556549 IPI:IPI00487539
RefSeq:NP_997982.1 UniGene:Dr.15893 SMR:Q7T1K1
Ensembl:ENSDART00000056878 GeneID:404035 KEGG:dre:404035 CTD:404035
InParanoid:Q7T1K1 OMA:LASHNEA NextBio:20817511 Uniprot:Q7T1K1
Length = 478
Score = 136 (52.9 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 310 NGVYFWKMYNFPAKLKEMKEINR---YFYSACFYSSCFGYRFCTRV----NISREDAQYL 362
+G WK+ +F +L+E K +S FYS +GYR N S ED ++
Sbjct: 307 DGTLLWKLTDFSQRLQEAKTRTSGCLELFSPAFYSHNYGYRLQVSAFLNGNGSGEDT-HM 365
Query: 363 SLFIHLVQGENDDILDWPFVGRIRFTALNT-----SSEFSITDEIQSDKNFDSFKRP 414
S+++ ++ GE D +L+WPF R+ F+ L+ + IT+ D + +F+RP
Sbjct: 366 SVYLRVLPGEYDGLLEWPFPYRVSFSLLDQCDPALTKPQHITETFSPDPTWKNFQRP 422
Score = 111 (44.1 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
+F C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L IF D
Sbjct: 15 KFYCPLCEKPMREPVQVSTCGHRFCDTCLQEYLS-EGVFTCPEDQLPLDYAKIFPDLELE 73
Query: 75 REILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
++IL + C + + C ++H++ C
Sbjct: 74 QQILSLPIRCIHSEEGCRWTAQNKLLQAHLSVC 106
Score = 46 (21.3 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 53 NYCPIDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
N C + K+L ++ + + + + + L C + C Q + YE+H C
Sbjct: 115 NRCSV--KLLRRE---LPEHLQHDCAKRKLHCDH--CGEQFTGEAYENHQGVC 160
Score = 44 (20.5 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 14/61 (22%), Positives = 24/61 (39%)
Query: 134 NKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLEL 193
N+ + +T H+ +G S C F + GC+ + +H + HL L
Sbjct: 223 NRCGTPGITRDTLMAHVK-EGCSTAMVLCPFKEAGCKHRSPKTGVA-RHLEEAAPTHLSL 280
Query: 194 L 194
L
Sbjct: 281 L 281
>UNIPROTKB|A7YWC7 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0043123 "positive regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA] [GO:0031996
"thioesterase binding" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027130 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005813 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0043123 GO:GO:0008270 GO:GO:0051092 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359
eggNOG:NOG239194 HOGENOM:HOG000231557 CTD:7188 KO:K09849
OMA:IDKSAWL OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23
EMBL:DAAA02043784 EMBL:DAAA02043785 EMBL:BC134494 IPI:IPI00685963
RefSeq:NP_001098810.1 UniGene:Bt.8981 SMR:A7YWC7 STRING:A7YWC7
Ensembl:ENSBTAT00000015940 GeneID:507234 KEGG:bta:507234
InParanoid:A7YWC7 NextBio:20867969 Uniprot:A7YWC7
Length = 558
Score = 205 (77.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 103/420 (24%), Positives = 184/420 (43%)
Query: 54 YCPI-DEKVL-TKDDIFIDNYTRREILEN-----NLTCPYKQCSSQLSIPEYESHVNTCY 106
YC +EK L K D+ + N E EN ++CP K C + E + H+ C
Sbjct: 160 YCQFREEKCLYCKKDVVVINLQNHE--ENLCPDYPVSCPNK-CLQTIPRTEVDEHLAVC- 215
Query: 107 LKYSQPSVEDITDSPTSSFRNTSGIPTNKR-NSKILTVTVFPEHLNMQGSSNENFPCKFY 165
P E +F+N +KR N + + +H+ + +NF +
Sbjct: 216 -----PEAEQ-----DCAFKNYGCAVKDKRGNLQEHERSALRDHMLLV--LEKNFQLE-E 262
Query: 166 QVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAY 225
Q+ +++KS L +K ++ L + K+ + Q SN + + ++
Sbjct: 263 QIS--DLYKS--LEQKESKIQ---QLAEMVKKFEKEFKQFAQLFGKNGSFLSNMQVLASH 315
Query: 226 LMKNKEHESK----LWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSML 281
+ K+ E + L N+ Q+ D + + T LL+ +R+V+LE
Sbjct: 316 IDKSAWLEVQVRQLLQMANQQQSKFDLKPLVE-AIDTVKQKITLLETNDQRLVVLEGETN 374
Query: 282 EQKIKVNNFELNLKQTEEIEDNVVLKLC-NGVYFWKMYNFPAKLKEMKEINRY-FYSACF 339
+ +N + L + EE ++ C NG WK+ ++ K KE + + +S F
Sbjct: 375 KHDAHINIHKAQLNKNEE-RFKLLESACYNGKLIWKVTDYKLKKKEALDGHTVSIFSQPF 433
Query: 340 YSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
Y+S GYR C R ++ + + +LSL+ +++GE D +L WPF R+ L+ S +
Sbjct: 434 YTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKK 493
Query: 397 S-ITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ I + ++D N SFKRP + +N A G F+ L+ + ++DDT +K V
Sbjct: 494 NHIMETFKADPNSSSFKRP-DGEMNI-ASGCPRFV-AHSTLENAKNTYIKDDTLFLKVAV 550
Score = 185 (70.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 57/250 (22%), Positives = 113/250 (45%)
Query: 1 MEHQPVANNKL--NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID 58
++ +P A + L+ R++C+ C L + T CGH+FC CI + ++ CP+D
Sbjct: 25 LDFEPDAEYQFVERLEERYKCAFCHSVLHNPHQTGCGHRFCHQCILALRELDTVPLCPVD 84
Query: 59 EKVLTKDDIFIDNYTRREILENNLTCPYK-QCSSQLSIPEYESHVNTCYLKYSQPSVEDI 117
++V+ ++F DN +RE+L + C +C++++ + Y+ H+ C + Q S E+
Sbjct: 85 KEVIKSQEVFKDNCCKREVLNLYVFCKNAPRCNAKIILGRYQDHLQHCLFQPVQCSNENC 144
Query: 118 TDSPT-SSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC-REVFKS 175
+ + R K L +N+Q + EN C Y V C + ++
Sbjct: 145 REPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINLQ-NHEENL-CPDYPVSCPNKCLQT 202
Query: 176 --QALLEKHYDLKTSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEH 232
+ +++H + + F Y C+ + N H R ++ + + L KN +
Sbjct: 203 IPRTEVDEHLAVCPEAEQDCAFKNYGCAVKDKRGNLQEHER--SALRDHMLLVLEKNFQL 260
Query: 233 ESKLWDPNKN 242
E ++ D K+
Sbjct: 261 EEQISDLYKS 270
>UNIPROTKB|K7GN38 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR027130 PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
EMBL:AEMK01103347 EMBL:CU915362 EMBL:FP565698
Ensembl:ENSSSCT00000034241 Uniprot:K7GN38
Length = 232
Score = 176 (67.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ R+ C+ C L + T CGH+FC CI S ++ CP+D++V+ ++F DN
Sbjct: 39 LEERYRCAFCRSVLHNPHQTGCGHRFCQDCILSLRELNAVPLCPVDKEVIKSQEVFKDNC 98
Query: 73 TRREILENNLTCPYKQ-CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPT-SSFRNTSG 130
+RE+L + C C++++ + Y+ H+ C + Q E + + +
Sbjct: 99 CKREVLNLYVFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCREPVLRKDLKEHAS 158
Query: 131 IPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC 169
R K L +N+Q + EN C Y V C
Sbjct: 159 TYCQFREEKCLYCKKDVVVINLQ-NHEENL-CPEYPVSC 195
>UNIPROTKB|Q805B1 [details] [associations]
symbol:TRAF-5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027130
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005813 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0043123 GO:GO:0008270 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
HOVERGEN:HBG058222 GeneTree:ENSGT00550000074359 eggNOG:NOG239194
HOGENOM:HOG000231557 CTD:7188 KO:K09849 OMA:IDKSAWL
OrthoDB:EOG4JWVD2 PANTHER:PTHR10131:SF23 HSSP:Q13114
EMBL:AADN02012068 EMBL:AB100868 EMBL:AJ720372 IPI:IPI00579684
RefSeq:NP_989550.1 UniGene:Gga.5127 SMR:Q805B1 STRING:Q805B1
Ensembl:ENSGALT00000016038 GeneID:374055 KEGG:gga:374055
InParanoid:Q805B1 NextBio:20813577 Uniprot:Q805B1
Length = 557
Score = 196 (74.1 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 79/300 (26%), Positives = 138/300 (46%)
Query: 169 CREVFKSQALLEKHYDLKTSFH-LELLFNKYCSDGSQSTNT-PSHGRQDTSNQKEIEAYL 226
C+E+ K Q L E + F LF K S+ ST T SH + + +++ +
Sbjct: 272 CKEI-KIQQLAEAVKKCEKEFRQFTQLFGKN-SNLMVSTQTLASHLDKSARLESQVKQLI 329
Query: 227 MKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIK 286
+ +SKL D D + + L++ +R+ +LE + ++
Sbjct: 330 QMANQQQSKL----------DLRPLFD-TIENVKQKIALMETYDQRLAVLESQSSKHDLQ 378
Query: 287 VNNFELNLKQTEEIEDNVVLKLC-NGVYFWKMYNFPAKLKEMKEINRYF--YSACFYSSC 343
+N + L + EE ++ C NG WK+ ++ K KE E R +S FY+S
Sbjct: 379 INIHKAQLNKNEE-RFKLLEGTCYNGKLIWKITDYKMKKKEAVE-GRVLSIFSQPFYTSR 436
Query: 344 FGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN-TSSEFSIT 399
GYR C R ++ + + ++SL+ +++GE D +L WPF ++ L+ T + I
Sbjct: 437 CGYRLCARAYLNGDGSGKGTHVSLYFVVMRGEFDSLLPWPFKQKVTLMLLDQTGKKNHIV 496
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
+ ++D N SFKRP + +N A G F+ VL+ + + DDT +K V ++T
Sbjct: 497 EVFRADPNSSSFKRP-DGEMNI-ASGCPRFVPHT-VLENTKNTYVRDDTLFLKV-VVDLT 552
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 53/251 (21%), Positives = 110/251 (43%)
Query: 1 MEHQPVANNKL--NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID 58
++ +P + K L+ R++C+ C L + T CGH+FC CI + + CP+D
Sbjct: 24 LDFEPDTDYKFVETLEDRYKCAYCHSVLHNPHQTGCGHRFCQQCILTLRGLNAVPTCPVD 83
Query: 59 EKVLTKDDIFIDNYTRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDI 117
++ + ++F DN +RE+L + C C+S++ + Y+ H+ C + Q + +
Sbjct: 84 KETIKMHEVFKDNCCKREVLNLYVFCKNLPDCNSKIILGRYQEHLQQCLFESVQCTNDGC 143
Query: 118 TDSPT-SSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQ 176
D ++ R + +N++ ++E C Y + C + SQ
Sbjct: 144 CDQILRKDLKDHLSQHCKFREEMCQYCNKYVVLINIK--NHEENDCPDYPMPCLQNC-SQ 200
Query: 177 ALL----EKHYDLKTSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKE 231
+L EKH+ + ++ + +Y C + H ++ + ++ + L KN
Sbjct: 201 IILKKEIEKHHTVCPETEVDCPYKQYGCLIKVKRGKLAEH--ENGALREHMLQILDKNSR 258
Query: 232 HESKLWDPNKN 242
E ++ D K+
Sbjct: 259 LEEQISDLYKS 269
>UNIPROTKB|E1BMI8 [details] [associations]
symbol:TRAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027136
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144 SMART:SM00061
GO:GO:0007165 GO:GO:0042981 GO:GO:0008270 GO:GO:0051092
SUPFAM:SSF49599 CTD:7185 KO:K03172 OMA:RRCHESA
PANTHER:PTHR10131:SF29 GeneTree:ENSGT00550000074359
EMBL:DAAA02024787 IPI:IPI00843279 RefSeq:NP_001179730.1
UniGene:Bt.42593 PRIDE:E1BMI8 Ensembl:ENSBTAT00000043659
GeneID:540944 KEGG:bta:540944 NextBio:20878924 Uniprot:E1BMI8
Length = 415
Score = 193 (73.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 55/204 (26%), Positives = 99/204 (48%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R++ L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 224 DREHILSLE-QRVLELQQTLAQKDQALGKLEQSLRLVEEAS-------YDGTFLWKITNV 275
Query: 321 PAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDD 375
+ E R +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D
Sbjct: 276 TRRCHE-SACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDA 334
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
+L WPF ++ F L+ ++ D + D N SF+RP + A G F + +
Sbjct: 335 LLPWPFRNKVTFMLLDQNNREHAIDAFRPDLNSASFQRPQSE--TNVASGCPLFFPLNKL 392
Query: 436 LDPGRGFLMEDDTFVIKTQVTEMT 459
P ++ +DDT +K V T
Sbjct: 393 QSPKHAYV-KDDTMFVKCVVDTNT 415
>MGI|MGI:101836 [details] [associations]
symbol:Traf1 "TNF receptor-associated factor 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0031996 "thioesterase binding" evidence=ISO] [GO:0042981
"regulation of apoptotic process" evidence=ISO] [GO:0051092
"positive regulation of NF-kappaB transcription factor activity"
evidence=ISO] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027136 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 SMART:SM00061 MGI:MGI:101836
GO:GO:0005737 GO:GO:0006915 GO:GO:0007165 GO:GO:0042981
GO:GO:0008270 GO:GO:0051092 EMBL:CH466542 SUPFAM:SSF49599
EMBL:AL929068 CTD:7185 eggNOG:NOG264247 HOGENOM:HOG000231558
HOVERGEN:HBG058222 KO:K03172 OMA:RRCHESA OrthoDB:EOG42Z4Q6
PANTHER:PTHR10131:SF29 EMBL:L35302 EMBL:AK029135 EMBL:AK169515
EMBL:AK172598 IPI:IPI00135899 PIR:A54750 RefSeq:NP_033447.2
UniGene:Mm.239514 HSSP:Q12933 ProteinModelPortal:P39428 SMR:P39428
DIP:DIP-260N IntAct:P39428 STRING:P39428 PhosphoSite:P39428
PRIDE:P39428 Ensembl:ENSMUST00000028234 Ensembl:ENSMUST00000113064
Ensembl:ENSMUST00000172159 GeneID:22029 KEGG:mmu:22029
GeneTree:ENSGT00550000074359 InParanoid:Q8CE28 NextBio:301776
Bgee:P39428 CleanEx:MM_TRAF1 Genevestigator:P39428
GermOnline:ENSMUSG00000026875 Uniprot:P39428
Length = 409
Score = 188 (71.2 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 52/198 (26%), Positives = 101/198 (51%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D H+L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 218 DREHILSLE-QRVVELQQTLAQKDQVLGKLEHSLRLMEEAS-------FDGTFLWKITNV 269
Query: 321 PAKLKEM---KEINRYFYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGEND 374
+ E + ++ +S FY++ +GY+ C R+ ++ + + +LSLFI +++GE D
Sbjct: 270 TKRCHESVCGRTVS--LFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYD 327
Query: 375 DILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVAD 434
+L WPF ++ F L+ ++ D + D + SF+RP + A G F ++
Sbjct: 328 ALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSK 385
Query: 435 VLDPGRGFLMEDDTFVIK 452
+ P ++ +DDT +K
Sbjct: 386 LQSPKHAYV-KDDTMFLK 402
>UNIPROTKB|Q13077 [details] [associations]
symbol:TRAF1 "TNF receptor-associated factor 1"
species:9606 "Homo sapiens" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=RCA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IPI] [GO:0031996 "thioesterase binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006461 "protein complex
assembly" evidence=TAS] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027136 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 SMART:SM00061 GO:GO:0005737
GO:GO:0006915 GO:GO:0007165 GO:GO:0006461 GO:GO:0042981
GO:GO:0008270 EMBL:CH471090 Pathway_Interaction_DB:tnfpathway
GO:GO:0051092 Pathway_Interaction_DB:hivnefpathway SUPFAM:SSF49599
PDB:3M0D PDBsum:3M0D EMBL:U19261 EMBL:AK090468 EMBL:AK295959
EMBL:AK315476 EMBL:AL832989 EMBL:BT019408 EMBL:AC006430
EMBL:BC024145 IPI:IPI00011549 IPI:IPI00984225 PIR:B55649
RefSeq:NP_001177874.1 RefSeq:NP_001177876.1 RefSeq:NP_005649.1
UniGene:Hs.531251 ProteinModelPortal:Q13077 SMR:Q13077
DIP:DIP-27514N IntAct:Q13077 MINT:MINT-1131534 STRING:Q13077
PhosphoSite:Q13077 DMDM:6707734 PaxDb:Q13077 PRIDE:Q13077
DNASU:7185 Ensembl:ENST00000373887 Ensembl:ENST00000540010
Ensembl:ENST00000546084 GeneID:7185 KEGG:hsa:7185 UCSC:uc004bku.2
CTD:7185 GeneCards:GC09M123664 HGNC:HGNC:12031 HPA:CAB009593
HPA:HPA001852 MIM:601711 neXtProt:NX_Q13077 PharmGKB:PA36708
eggNOG:NOG264247 HOGENOM:HOG000231558 HOVERGEN:HBG058222
InParanoid:Q13077 KO:K03172 OMA:RRCHESA OrthoDB:EOG42Z4Q6
PhylomeDB:Q13077 EvolutionaryTrace:Q13077 GenomeRNAi:7185
NextBio:28168 PMAP-CutDB:Q13077 ArrayExpress:Q13077 Bgee:Q13077
CleanEx:HS_TRAF1 Genevestigator:Q13077 GermOnline:ENSG00000056558
PANTHER:PTHR10131:SF29 Uniprot:Q13077
Length = 416
Score = 184 (69.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 54/204 (26%), Positives = 99/204 (48%)
Query: 261 DNSHLLKLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNF 320
D +L L +R+V L+Q++ ++ + E +L+ EE +G + WK+ N
Sbjct: 225 DRERILSLE-QRVVELQQTLAQKDQALGKLEQSLRLMEEAS-------FDGTFLWKITNV 276
Query: 321 PAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDD 375
+ E R +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D
Sbjct: 277 TRRCHE-SACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDA 335
Query: 376 ILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV 435
+L WPF ++ F L+ ++ D + D + SF+RP + A G F ++ +
Sbjct: 336 LLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPLFFPLSKL 393
Query: 436 LDPGRGFLMEDDTFVIKTQVTEMT 459
P ++ +DDT +K V T
Sbjct: 394 QSPKHAYV-KDDTMFLKCIVETST 416
Score = 45 (20.9 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELL 194
C F VGC Q++ E +TS HL LL
Sbjct: 88 CPFAGVGCSFKGSPQSVQEHEVTSQTS-HLNLL 119
>RGD|1304633 [details] [associations]
symbol:Traf3 "Tnf receptor-associated factor 3" species:10116
"Rattus norvegicus" [GO:0001817 "regulation of cytokine production"
evidence=IEA;ISO] [GO:0002224 "toll-like receptor signaling
pathway" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008063 "Toll signaling pathway" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009898 "internal side of plasma membrane"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0030162 "regulation of proteolysis" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0031996
"thioesterase binding" evidence=ISO] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IEA;ISO] [GO:0032648 "regulation of interferon-beta
production" evidence=ISO] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA;ISO] [GO:0035631
"CD40 receptor complex" evidence=ISO] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0050688 "regulation of defense response
to virus" evidence=IEA;ISO] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 RGD:1304633 Prosite:PS00518
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
PANTHER:PTHR10131:SF45 IPI:IPI00948829 Ensembl:ENSRNOT00000064527
UCSC:RGD:1304633 ArrayExpress:D3ZK50 Uniprot:D3ZK50
Length = 542
Score = 189 (71.6 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 95/423 (22%), Positives = 186/423 (43%)
Query: 52 KNYCPIDEKVLTKDDIFIDNYTRREILEN-NLTCPYKQ-----CSSQLSIPEYESHVNT- 104
KN C +E + D + RR++ ++ C Y++ C SQ+ + + H +T
Sbjct: 137 KNECQFEELPCLRADCK-EKVLRRDLRDHVEKACKYREATCAHCKSQVPMITLQKHEDTD 195
Query: 105 C-YLKYSQPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCK 163
C + S P + S N I ++ +S + +H+N+ + + K
Sbjct: 196 CPCVVVSCPHKCSVQTLLRSEGTNQQ-IKAHEASSAV-------QHVNLLKEWSNSLEKK 247
Query: 164 FYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQK--E 221
+ V K++++ H + SF +E+ K ++S D+ +K E
Sbjct: 248 VSLLQNESVEKNKSIQSLHNQI-CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKE 306
Query: 222 IEAYLMKNKEHESKLWDPNKN--QAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQS 279
++ + +++ + D K+ ++ ++ +E + K+ G + L+ ++ +Q
Sbjct: 307 LDKEIRPFRQNWEEA-DSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQM 365
Query: 280 MLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEM---KEINRYFYS 336
+ I++ + +L + E NGV WK+ ++ + +E K ++ YS
Sbjct: 366 LSVHDIRLADMDLRFQVLETAS-------YNGVLIWKIRDYKRRKQEAVMGKTLS--LYS 416
Query: 337 ACFYSSCFGYRFCTRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT- 392
FY+ FGY+ C RV ++ + +LSLF +++GE D +L WPF ++ ++
Sbjct: 417 QPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQG 476
Query: 393 SSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
SS + D + D N SFK+P +N A G F+ VL+ G ++DDT IK
Sbjct: 477 SSRRHLGDAFKPDPNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIFIK 531
Query: 453 TQV 455
V
Sbjct: 532 VIV 534
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 27/96 (28%), Positives = 48/96 (50%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPK-CTACQESIIKDKVFKDNC 104
Query: 73 TRREILENNLTCPY--KQCSSQLSIPEYESHV-NTC 105
+REIL + C + C QL++ H+ N C
Sbjct: 105 CKREILALQIYCRNEGRGCVEQLTLGHLLVHLKNEC 140
>UNIPROTKB|A6NHG8 [details] [associations]
symbol:TRAF3 "TNF receptor-associated factor 3"
species:9606 "Homo sapiens" [GO:0001817 "regulation of cytokine
production" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008063 "Toll signaling pathway"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated
signaling pathway" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0050688 "regulation of defense response
to virus" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 InterPro:IPR027128 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 SMART:SM00184 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AL117209 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 HOVERGEN:HBG058222
RefSeq:NP_663778.1 UniGene:Hs.510528 GeneID:7187 KEGG:hsa:7187
CTD:7187 HGNC:HGNC:12033 PharmGKB:PA36710 KO:K03174 ChiTaRS:TRAF3
GenomeRNAi:7187 NextBio:28176 PANTHER:PTHR10131:SF45
HOGENOM:HOG000231557 EMBL:AL132801 IPI:IPI00744216 SMR:A6NHG8
STRING:A6NHG8 Ensembl:ENST00000347662 Ensembl:ENST00000351691
UCSC:uc001yme.2 Uniprot:A6NHG8
Length = 543
Score = 188 (71.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 94/410 (22%), Positives = 181/410 (44%)
Query: 59 EKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNT-C-YLKYSQPSVED 116
EKVL KD + ++ + TC + C SQ+ + + H +T C + S P
Sbjct: 155 EKVLRKD---LRDHVEKACKYREATCSH--CKSQVPMIALQKHEDTDCPCVVVSCPHKCS 209
Query: 117 ITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQ 176
+ S N I ++ +S + +H+N+ + + K + V K++
Sbjct: 210 VQTLLRSEGTNQQ-IKAHEASSAV-------QHVNLLKEWSNSLEKKVSLLQNESVEKNK 261
Query: 177 ALLEKHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQK--EIEAYLMKNKEHES 234
++ H + SF +E+ K ++S D+ +K E++ + +++
Sbjct: 262 SIQSLHNQI-CSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWE 320
Query: 235 KLWDPNKN--QAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFEL 292
+ D K+ ++ ++ +E + K+ G + L+ ++ +Q + I++ + +L
Sbjct: 321 EA-DSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDL 379
Query: 293 NLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEM---KEINRYFYSACFYSSCFGYRFC 349
+ E NGV WK+ ++ + +E K ++ YS FY+ FGY+ C
Sbjct: 380 RFQVLETAS-------YNGVLIWKIRDYKRRKQEAVMGKTLS--LYSQPFYTGYFGYKMC 430
Query: 350 TRVNISRED---AQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT-SSEFSITDEIQSD 405
RV ++ + +LSLF +++GE D +L WPF ++ ++ SS + D + D
Sbjct: 431 ARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPD 490
Query: 406 KNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
N SFK+P +N A G F+ VL+ G ++DDT IK V
Sbjct: 491 PNSSSFKKPTGE-MNI-ASGCPVFV-AQTVLE--NGTYIKDDTIFIKVIV 535
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L T CGH+FC +C+ + + C ++ + KD +F DN
Sbjct: 47 VEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPK-CTACQESIVKDKVFKDNC 105
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHV-NTCYLK 108
+REIL + C + C+ QL + H+ N C+ +
Sbjct: 106 CKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFE 144
>UNIPROTKB|K7GRG1 [details] [associations]
symbol:TRAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0033209 "tumor
necrosis factor-mediated signaling pathway" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007250
"activation of NF-kappaB-inducing kinase activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR027133 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061
SUPFAM:SSF49599 GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF21
EMBL:FP236151 Ensembl:ENSSSCT00000034674 Uniprot:K7GRG1
Length = 392
Score = 160 (61.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 47/154 (30%), Positives = 77/154 (50%)
Query: 311 GVYF-WKMYNFPAKLKEMKEINR-YFYSACFYSSCFGYRFCTRVNISREDA---QYLSLF 365
GV F WK+ +F K +E +S FY+S +GY+ C R ++ + +LSLF
Sbjct: 242 GVSFIWKISDFARKRQEAVAGRAPAIFSPAFYTSRYGYKMCLRAYLNGDGTGRGTHLSLF 301
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFG 425
L++G ND +L WPF ++ L+ ++ + D + D + SF+RPV +N A G
Sbjct: 302 FVLMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVSSSSFQRPVGD-MNI-ASG 359
Query: 426 FNNFIRVADVLDPGRGFLMEDDTFVIKTQVTEMT 459
F V+ + R + DD IK + ++T
Sbjct: 360 CPLFCPVSRM--EARSSYVRDDAIFIKA-IVDLT 390
Score = 67 (28.6 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 146 FPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKY 198
F +H+ G PC+F+ VGC E+ +S+ E H + HL LL +
Sbjct: 80 FQDHVRTCGRCR--VPCRFHAVGCPEMVESEKQQE-HEAQRLREHLGLLLGVF 129
Score = 39 (18.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 82 LTCPYKQCSSQ-LSIPEYESHVNTC 105
LTC C + +S +++ HV TC
Sbjct: 65 LTCD--GCGKKKISREKFQDHVRTC 87
>UNIPROTKB|F6SA91 [details] [associations]
symbol:TRAF4 "TNF receptor-associated factor 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0046330 "positive regulation of JNK
cascade" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50145
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0007165
GO:GO:0042981 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 EMBL:AC010761 HGNC:HGNC:12034 HOVERGEN:HBG103438
ChiTaRS:TRAF4 PANTHER:PTHR10131:SF46 IPI:IPI00791505
ProteinModelPortal:F6SA91 Ensembl:ENST00000444415 Uniprot:F6SA91
Length = 437
Score = 112 (44.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ ++ + +LSL+
Sbjct: 307 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 366
Query: 366 IHLVQGENDDILDWPFVGR 384
I ++ G D++L+WPF R
Sbjct: 367 IRVLPGAFDNLLEWPFARR 385
Score = 110 (43.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 16 RFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
R C +C + +++ + +++CGH+FC C+ ++ +G CP D+ L I+ D
Sbjct: 15 RLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLS-EGVFKCPEDQLPLDYAKIYPDPELE 73
Query: 75 REILENNLTCPYKQCSSQLSIP--EYESHVNTC 105
++L + C + + + S P + H+NTC
Sbjct: 74 VQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTC 106
Score = 47 (21.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 53 NYCPIDEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
N CP+ K+ +D + + + + + L C + C S YESH C
Sbjct: 115 NRCPM--KLSRRD---LPAHLQHDCPKRRLKCEF--CGCDFSGEAYESHEGMC 160
>RGD|1310457 [details] [associations]
symbol:Traf2 "Tnf receptor-associated factor 2" species:10116
"Rattus norvegicus" [GO:0002726 "positive regulation of T cell
cytokine production" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005164 "tumor necrosis factor receptor binding"
evidence=ISO] [GO:0005174 "CD40 receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0006461 "protein complex assembly" evidence=IMP] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030163 "protein catabolic process" evidence=ISO]
[GO:0031435 "mitogen-activated protein kinase kinase kinase
binding" evidence=IPI] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0031996 "thioesterase binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0032743 "positive regulation of interleukin-2 production"
evidence=ISO] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=ISO;IMP] [GO:0034351 "negative regulation of
glial cell apoptotic process" evidence=IMP] [GO:0035631 "CD40
receptor complex" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043234 "protein complex"
evidence=IMP;IDA] [GO:0043507 "positive regulation of JUN kinase
activity" evidence=ISO] [GO:0043623 "cellular protein complex
assembly" evidence=ISO] [GO:0045121 "membrane raft" evidence=IDA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA;ISO]
[GO:0046625 "sphingolipid binding" evidence=ISO] [GO:0051023
"regulation of immunoglobulin secretion" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=ISO;IMP]
[GO:0051291 "protein heterooligomerization" evidence=IPI]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0070207 "protein homotrimerization" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=ISO] [GO:0090073
"positive regulation of protein homodimerization activity"
evidence=ISO] [GO:2001238 "positive regulation of extrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027133
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 SMART:SM00184 Pfam:PF00097
RGD:1310457 Prosite:PS00518 GO:GO:0005938 GO:GO:0051291
GO:GO:0043234 GO:GO:0046872 GO:GO:0008270 GO:GO:0045121
GO:GO:0030163 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0070207 GO:GO:0033209 GO:GO:0004842 GO:GO:0007250
GO:GO:0009898 InterPro:IPR017907 GO:GO:0070534 GO:GO:2001238
GO:GO:0043623 SUPFAM:SSF49599 GO:GO:0035631 GO:GO:0032743
GO:GO:0051023 GO:GO:0090073 GO:GO:0043507 GO:GO:0034351
GO:GO:0046625 GO:GO:0002726 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF21 IPI:IPI00950063 ProteinModelPortal:E9PSP4
Ensembl:ENSRNOT00000008253 UCSC:RGD:1310457 ArrayExpress:E9PSP4
Uniprot:E9PSP4
Length = 504
Score = 112 (44.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 63/299 (21%), Positives = 129/299 (43%)
Query: 162 CKFYQVGCREVFKSQALLEKHYDLKTSFHLELLFNKYC-SDGSQSTNTPSHGRQDTSNQK 220
C+F+ +GC E+ +++ L + H + HL LL + + S SQ+ P ++ ++
Sbjct: 222 CRFHAIGCSELVETEDL-QDHELQRLREHLALLLSSFLESQASQNQVGPELLQRCQILEQ 280
Query: 221 EIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLLEQSM 280
+I + E+ + N+ ++E CS + D + + + ++ LE+S+
Sbjct: 281 KIATF-------ENIVCVLNREVERVAVTAEA-CSRQHRLDQDKI-EALSNKVQQLERSI 331
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACF 339
+ + + + E ++ E+E + +GV+ WK+ +F K +E + +S
Sbjct: 332 GLKDLAMADLE---QKVSELE----VSTYDGVFIWKISDFARKRQEAIAGRTPAIFSPGA 384
Query: 340 YSSCFGYRFCTRVNIS---REDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+GY V + + +F L++ L WPF ++ L+ ++
Sbjct: 385 VCVTYGYSMLLNVYLQGPCKGRGTGSLIFFALMRTPTTRFLQWPFNQKVTLMLLDHNNRE 444
Query: 397 SITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQV 455
+ D + D SF+RPV+ +N A G F V+ + + + DD IK V
Sbjct: 445 HVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKI--EAKNSYVRDDAIFIKAIV 499
Score = 109 (43.4 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 30/109 (27%), Positives = 46/109 (42%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDV------KGKNYCP--IDE----- 59
L+ ++ CS C L+ CGH++C+ C+ S + G C + E
Sbjct: 28 LEAKYLCSACRNILRRPFQAQCGHRYCSFCLTSILRCAAVLGGSGPQNCAACVHEGLYEE 87
Query: 60 --KVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTC 105
+L F DN RRE+ CP C+ + ++ EYES H C
Sbjct: 88 GISILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLC 136
Score = 95 (38.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 40/183 (21%), Positives = 77/183 (42%)
Query: 281 LEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKE-MKEINRYFYSACF 339
LE+ I + +L + E+ + + +GV+ WK+ +F K +E + +S
Sbjct: 327 LERSIGLK--DLAMADLEQKVSELEVSTYDGVFIWKISDFARKRQEAIAGRTPAIFSPGA 384
Query: 340 YSSCFGYRFCTRVNIS---REDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSEF 396
+GY V + + +F L++ L WPF ++ L+ ++
Sbjct: 385 VCVTYGYSMLLNVYLQGPCKGRGTGSLIFFALMRTPTTRFLQWPFNQKVTLMLLDHNNRE 444
Query: 397 SITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKTQVT 456
+ D + D SF+RPV+ +N A G F V+ + + + DD IK +
Sbjct: 445 HVIDAFRPDVTSSSFQRPVSD-MNI-ASGCPLFCPVSKI--EAKNSYVRDDAIFIKA-IV 499
Query: 457 EMT 459
++T
Sbjct: 500 DLT 502
>UNIPROTKB|E1C2K2 [details] [associations]
symbol:TRAF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR027130
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Prosite:PS00518
GO:GO:0005813 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
EMBL:AADN02012068 IPI:IPI00683517 Ensembl:ENSGALT00000031926
ArrayExpress:E1C2K2 Uniprot:E1C2K2
Length = 366
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 53/251 (21%), Positives = 110/251 (43%)
Query: 1 MEHQPVANNKL--NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPID 58
++ +P + K L+ R++C+ C L + T CGH+FC CI + + CP+D
Sbjct: 24 LDFEPDTDYKFVETLEDRYKCAYCHSVLHNPHQTGCGHRFCQQCILTLRGLNAVPTCPVD 83
Query: 59 EKVLTKDDIFIDNYTRREILENNLTCP-YKQCSSQLSIPEYESHVNTCYLKYSQPSVEDI 117
++ + ++F DN +RE+L + C C+S++ + Y+ H+ C + Q + +
Sbjct: 84 KETIKMHEVFKDNCCKREVLNLYVFCKNLPDCNSKIILGRYQEHLQQCLFESVQCTNDGC 143
Query: 118 TDSPT-SSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQ 176
D ++ R + +N++ ++E C Y + C + SQ
Sbjct: 144 CDQILRKDLKDHLSQHCKFREEMCQYCNKYVVLINIK--NHEENDCPDYPMPCLQNC-SQ 200
Query: 177 ALL----EKHYDLKTSFHLELLFNKY-CSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKE 231
+L EKH+ + ++ + +Y C + H ++ + ++ + L KN
Sbjct: 201 IILKKEIEKHHTVCPETEVDCPYKQYGCLIKVKRGKLAEH--ENGALREHMLQILDKNSR 258
Query: 232 HESKLWDPNKN 242
E ++ D K+
Sbjct: 259 LEEQISDLYKS 269
>UNIPROTKB|Q5ZIR9 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005741
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006914
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 EMBL:AJ720715
IPI:IPI00586277 RefSeq:NP_001007841.1 UniGene:Gga.4866
ProteinModelPortal:Q5ZIR9 Ensembl:ENSGALT00000011276 GeneID:416965
KEGG:gga:416965 CTD:91445 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 InParanoid:Q5ZIR9
OMA:LSKVFLW OrthoDB:EOG4R7VC8 NextBio:20820352 ArrayExpress:Q5ZIR9
Uniprot:Q5ZIR9
Length = 194
Score = 145 (56.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKD 65
A + N D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D
Sbjct: 29 AGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRD 88
Query: 66 DIFIDNYTR 74
+ I Y R
Sbjct: 89 KV-IPLYGR 96
>UNIPROTKB|I3LC29 [details] [associations]
symbol:TRAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0031996 "thioesterase binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR027136
Pfam:PF00917 PROSITE:PS50144 SMART:SM00061 GO:GO:0042981
GO:GO:0051092 SUPFAM:SSF49599 OMA:RRCHESA PANTHER:PTHR10131:SF29
GeneTree:ENSGT00550000074359 Ensembl:ENSSSCT00000023374
Uniprot:I3LC29
Length = 336
Score = 162 (62.1 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 64/243 (26%), Positives = 110/243 (45%)
Query: 162 CKFYQVGCREVFK-SQALLEKHYDLKTSFHLELL--FNKYCSD--GSQSTNTPSHGRQDT 216
C++ VGC FK S +++H + HL LL F K GS S + P Q+
Sbjct: 87 CRYPGVGCS--FKGSPKFIQEHEVTSQATHLNLLLGFMKQWKAQLGSVSGSGPMALEQNL 144
Query: 217 SNQKEIEAYLMKNK---EHESKLWDPNKNQAGDDKSSEGDCSCKTCG------DNSHLLK 267
S+ +++ +MK K E E KL A +K E D H+
Sbjct: 145 SDL-QLQGAVMKEKLLTELEGKLCVFENIVAVLNKEVEASNLALAASIHQSQLDREHIQS 203
Query: 268 LVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAKLKEM 327
L + ++ L+Q++ ++ + E +L+ EE +G + WK+ N + E
Sbjct: 204 LEQKIVIELQQTLAQKDQALGKLEQSLRLLEEAS-------FDGTFLWKITNVTRRCHE- 255
Query: 328 KEINRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFV 382
R +S FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF
Sbjct: 256 SACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMRGEYDALLPWPFR 315
Query: 383 GRI 385
++
Sbjct: 316 NKV 318
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 138 (53.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/140 (27%), Positives = 66/140 (47%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGK-NYCPIDEKVLTK 64
+ N + + F C+ICLE ++ I+T CGH FC C+ W+ K N+CP+ K L K
Sbjct: 6 ITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVC-KALVK 64
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSS 124
+D + Y + + P + +S +++P + T + ++P +E +S
Sbjct: 65 EDTLVPLYGMGKPSSD----PRSKLNSGVTVPNRPAATRT---ETARPRLEQ-RHHGSSF 116
Query: 125 FRNTSG---IPTNKRNSKIL 141
F S +PT R S L
Sbjct: 117 FGGHSSFAAMPTGLRFSNFL 136
>UNIPROTKB|F1RNA8 [details] [associations]
symbol:TRAF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR013323
InterPro:IPR027138 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144
PROSITE:PS50145 SMART:SM00061 GO:GO:0007165 GO:GO:0042981
GO:GO:0046872 GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599
Gene3D:3.90.890.10 OMA:EAFESHE PANTHER:PTHR10131:SF46 EMBL:FP016171
Ensembl:ENSSSCT00000019347 Uniprot:F1RNA8
Length = 423
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/154 (26%), Positives = 81/154 (52%)
Query: 310 NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLF 365
+GV WK+ ++ +L+E K + N +S FY+ +GY+ ++ + +LSL+
Sbjct: 260 DGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLY 319
Query: 366 IHLVQGENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNF--F 418
I ++ G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P +
Sbjct: 320 IRVLPGAFDNLLEWPFARRVTFSLLDQSEPGLAKPQHVTETFHPDPNWKNFQKPGTWRGS 379
Query: 419 LNKKA--FGFNNFIRVADVLDPGRGFLMEDDTFV 450
L++ + FG+ FI D+ R ++ +D F+
Sbjct: 380 LDESSLGFGYPKFISHQDIRK--RNYVRDDAVFI 411
>FB|FBgn0026319 [details] [associations]
symbol:Traf4 "TNF-receptor-associated factor 4" species:7227
"Drosophila melanogaster" [GO:0007391 "dorsal closure"
evidence=TAS] [GO:0009790 "embryo development" evidence=IEP]
[GO:0002168 "instar larval development" evidence=IEP] [GO:0008063
"Toll signaling pathway" evidence=NAS] [GO:0006952 "defense
response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0048102 "autophagic cell death" evidence=IEP]
[GO:0035071 "salivary gland cell autophagic cell death"
evidence=IEP] [GO:0046529 "imaginal disc fusion, thorax closure"
evidence=IGI] [GO:0046330 "positive regulation of JNK cascade"
evidence=IGI] [GO:0001654 "eye development" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0045167 "asymmetric
protein localization involved in cell fate determination"
evidence=IMP] [GO:0045179 "apical cortex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007370 "ventral furrow formation" evidence=IMP]
[GO:0003384 "apical constriction involved in gastrulation"
evidence=IMP] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0034332 "adherens junction organization" evidence=IMP]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 Pfam:PF00917
PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061
GO:GO:0045167 GO:GO:0006911 EMBL:AE014134 GO:GO:0046872
GO:GO:0007391 GO:GO:0008270 GO:GO:0046330 GO:GO:0043065
GO:GO:0045179 GO:GO:0007370 GO:GO:0035071 GO:GO:0004842
GO:GO:0008063 SUPFAM:SSF49599 GO:GO:0001654 GO:GO:0002168
GO:GO:0046529 Gene3D:3.90.890.10 eggNOG:NOG321306
GeneTree:ENSGT00550000074359 CTD:9618 KO:K09848
RefSeq:NP_001097080.1 UniGene:Dm.3100 ProteinModelPortal:A8DYU9
SMR:A8DYU9 STRING:A8DYU9 EnsemblMetazoa:FBtr0112925 GeneID:33638
KEGG:dme:Dmel_CG3048 UCSC:CG3048-RC FlyBase:FBgn0026319 OMA:DPTWENF
OrthoDB:EOG48GTJM PhylomeDB:A8DYU9 GenomeRNAi:33638 NextBio:784548
Bgee:A8DYU9 Uniprot:A8DYU9
Length = 559
Score = 143 (55.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 46/171 (26%), Positives = 85/171 (49%)
Query: 292 LNLKQTEEIE--DNVVLKLC---NGVYFWKMYNFPAKLKEMK-EINRYFYSACFYSSCFG 345
L+ +Q ++I+ + V KL G WK+ ++ AK+ E + + S FY+S +G
Sbjct: 380 LSSRQGQQIQMLKSAVSKLSINYTGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYG 439
Query: 346 YRFCTRVNISRE---DAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNT---SSEFSIT 399
Y+ + ++ + ++S++I ++ GE D +L WPF I FT S + +
Sbjct: 440 YKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGAQSGQGGVA 499
Query: 400 DEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFV 450
+ D +++F+RP N ++ FGF FI ++L R F+ D F+
Sbjct: 500 ESFVPDPTWENFQRPSNE-PDQLGFGFPRFIS-HELLH-SRPFIKGDTVFL 547
Score = 62 (26.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 162 CKFYQVGCREVFKS-QALLEKHYDLKTSFHLELLFNKYCSDGSQ 204
C F + GCR FK + +LE H + + HL L+ G Q
Sbjct: 346 CSFKEAGCR--FKGPRQMLEAHLESNAAAHLSLMVALSSRQGQQ 387
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 134 (52.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNYTR 74
FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y R
Sbjct: 2 FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLYGR 59
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 134 (52.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 134 (52.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>FB|FBgn0028847 [details] [associations]
symbol:CG9014 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031386 "protein
tag" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:AE014134 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 Gene3D:3.90.890.10
HSSP:P15919 GeneTree:ENSGT00530000063647 KO:K11981 EMBL:BT003232
RefSeq:NP_609668.2 UniGene:Dm.12062 SMR:Q9VJW5 IntAct:Q9VJW5
MINT:MINT-313528 STRING:Q9VJW5 EnsemblMetazoa:FBtr0080579
GeneID:34777 KEGG:dme:Dmel_CG9014 UCSC:CG9014-RA
FlyBase:FBgn0028847 eggNOG:NOG250957 InParanoid:Q9VJW5 OMA:HVDEELI
OrthoDB:EOG49CNQ9 GenomeRNAi:34777 NextBio:790166 Uniprot:Q9VJW5
Length = 328
Score = 152 (58.6 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 12 NLDPRFECSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEK-VLTKDDIFI 69
++D C IC + L++ + +S C H FC ACID W+ ++ K CP+D +LT + +
Sbjct: 11 HVDEELICPICTDVLEEPVQSSECEHAFCRACIDKWM-IQ-KQICPVDRSGLLTSHLVPV 68
Query: 70 DNYTRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R + + C + Q C+ L++ E+ +HV C
Sbjct: 69 SRLMRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVAAC 106
>UNIPROTKB|A4IFC2 [details] [associations]
symbol:RNF185 "RNF185 protein" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 CTD:91445
eggNOG:NOG300581 GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495
OMA:LSKVFLW OrthoDB:EOG4R7VC8 EMBL:DAAA02045640 EMBL:BC134508
IPI:IPI00689680 RefSeq:NP_001077172.1 UniGene:Bt.26786
Ensembl:ENSBTAT00000003661 GeneID:524459 KEGG:bta:524459
InParanoid:A4IFC2 NextBio:20873969 Uniprot:A4IFC2
Length = 192
Score = 138 (53.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>UNIPROTKB|F1PCX5 [details] [associations]
symbol:RNF185 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 CTD:91445 GeneTree:ENSGT00390000014107
OMA:LSKVFLW EMBL:AAEX03014800 RefSeq:XP_852634.1
ProteinModelPortal:F1PCX5 Ensembl:ENSCAFT00000020620 GeneID:486362
KEGG:cfa:486362 Uniprot:F1PCX5
Length = 192
Score = 138 (53.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>UNIPROTKB|Q96GF1 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005741
GO:GO:0046872 GO:GO:0016874 EMBL:CH471095 GO:GO:0008270
GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC002073 EMBL:AC005005 HOGENOM:HOG000238304
KO:K10666 CTD:91445 eggNOG:NOG300581 HOVERGEN:HBG054495 OMA:LSKVFLW
OrthoDB:EOG4R7VC8 EMBL:DQ296559 EMBL:DQ296561 EMBL:DQ296562
EMBL:DQ296565 EMBL:CR456349 EMBL:AK095947 EMBL:AK291236
EMBL:BC009504 EMBL:BC026040 EMBL:BC033166 EMBL:BC012817
EMBL:BC035684 IPI:IPI00182628 IPI:IPI00435433 RefSeq:NP_001129297.1
RefSeq:NP_689480.2 UniGene:Hs.517553 ProteinModelPortal:Q96GF1
SMR:Q96GF1 IntAct:Q96GF1 PhosphoSite:Q96GF1 DMDM:74751883
PRIDE:Q96GF1 DNASU:91445 Ensembl:ENST00000266252
Ensembl:ENST00000326132 Ensembl:ENST00000518626 GeneID:91445
KEGG:hsa:91445 UCSC:uc003akb.3 GeneCards:GC22P031556
HGNC:HGNC:26783 HPA:HPA048329 neXtProt:NX_Q96GF1
PharmGKB:PA142671056 InParanoid:Q96GF1 PhylomeDB:Q96GF1
ChiTaRS:RNF185 GenomeRNAi:91445 NextBio:77254 ArrayExpress:Q96GF1
Bgee:Q96GF1 CleanEx:HS_RNF185 Genevestigator:Q96GF1
GermOnline:ENSG00000138942 Uniprot:Q96GF1
Length = 192
Score = 138 (53.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>UNIPROTKB|F2Z4Y3 [details] [associations]
symbol:RNF185 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 CTD:91445 GeneTree:ENSGT00390000014107
OMA:LSKVFLW EMBL:CT573044 RefSeq:XP_001925859.1 UniGene:Ssc.80754
ProteinModelPortal:F2Z4Y3 SMR:F2Z4Y3 Ensembl:ENSSSCT00000010981
GeneID:100157569 KEGG:ssc:100157569 Uniprot:F2Z4Y3
Length = 192
Score = 138 (53.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>MGI|MGI:1922078 [details] [associations]
symbol:Rnf185 "ring finger protein 185" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:1922078 Prosite:PS00518 GO:GO:0016021
GO:GO:0005741 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000238304 KO:K10666 CTD:91445
eggNOG:NOG300581 GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495
OrthoDB:EOG4R7VC8 ChiTaRS:RNF185 EMBL:AK034108 EMBL:AK052436
EMBL:AK053358 EMBL:AK075756 EMBL:AK077638 EMBL:AK149640
EMBL:AK165895 EMBL:AK167455 EMBL:AK168904 EMBL:BC014812
IPI:IPI00329937 IPI:IPI00453942 RefSeq:NP_663330.2
UniGene:Mm.136973 ProteinModelPortal:Q91YT2 SMR:Q91YT2
PhosphoSite:Q91YT2 PRIDE:Q91YT2 Ensembl:ENSMUST00000064364
Ensembl:ENSMUST00000077078 GeneID:193670 KEGG:mmu:193670
UCSC:uc007hsv.1 InParanoid:Q91YT2 OMA:WIALIFM NextBio:371498
Bgee:Q91YT2 CleanEx:MM_RNF185 Genevestigator:Q91YT2
GermOnline:ENSMUSG00000020448 Uniprot:Q91YT2
Length = 192
Score = 138 (53.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>RGD|1564777 [details] [associations]
symbol:Rnf185 "ring finger protein 185" species:10116 "Rattus
norvegicus" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 RGD:1564777
Prosite:PS00518 GO:GO:0016021 GO:GO:0005741 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006914 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
HOGENOM:HOG000238304 KO:K10666 CTD:91445 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 OMA:LSKVFLW
OrthoDB:EOG4R7VC8 EMBL:BC092655 IPI:IPI00195276
RefSeq:NP_001019442.1 UniGene:Rn.7234 ProteinModelPortal:Q568Y3
PhosphoSite:Q568Y3 Ensembl:ENSRNOT00000026134 GeneID:360967
KEGG:rno:360967 UCSC:RGD:1564777 InParanoid:Q568Y3 NextBio:674743
Genevestigator:Q568Y3 GermOnline:ENSRNOG00000019325 Uniprot:Q568Y3
Length = 192
Score = 138 (53.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 92
Query: 73 TR 74
R
Sbjct: 93 GR 94
>UNIPROTKB|E2QWC6 [details] [associations]
symbol:TRAF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR027136 Pfam:PF00917 PROSITE:PS50144 SMART:SM00061
SUPFAM:SSF49599 OMA:RRCHESA PANTHER:PTHR10131:SF29
GeneTree:ENSGT00550000074359 EMBL:AAEX03008173 EMBL:AAEX03008174
EMBL:AAEX03008175 Ensembl:ENSCAFT00000035950 Uniprot:E2QWC6
Length = 414
Score = 152 (58.6 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 40/144 (27%), Positives = 73/144 (50%)
Query: 314 FWKMYNFPAKLKEMKEINRY--FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHL 368
+WK+ N + E R +S FY++ +GY+ C R+ ++ + +LSLFI +
Sbjct: 268 WWKITNVTFRCHE-SACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVI 326
Query: 369 VQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNN 428
++GE D +L WPF ++ F L+ ++ D + D + SF+RP + A G
Sbjct: 327 MRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSE--TNVASGCPL 384
Query: 429 FIRVADVLDPGRGFLMEDDTFVIK 452
F ++ + P ++ +DDT +K
Sbjct: 385 FFPLSRLQSPKHAYV-KDDTMFLK 407
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 130 (50.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACID-SWIDVKGKNYCPI 57
+NL C ICLEYLKD + +CGH FC +C+ SW D+ CP+
Sbjct: 8 VNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPV 55
>WB|WBGene00004381 [details] [associations]
symbol:rnf-5 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0055120 "striated muscle dense body" evidence=IDA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0055002 "striated muscle cell
development" evidence=IMP] [GO:0030054 "cell junction"
evidence=IDA] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0008340 GO:GO:0046872 GO:GO:0030054 GO:GO:0018996
GO:GO:0055120 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GO:GO:0042787 EMBL:Z46787
GO:GO:0055002 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 PIR:T19328 RefSeq:NP_497830.1
ProteinModelPortal:Q09463 SMR:Q09463 IntAct:Q09463 STRING:Q09463
PaxDb:Q09463 EnsemblMetazoa:C16C10.7 GeneID:175532
KEGG:cel:CELE_C16C10.7 UCSC:C16C10.7 CTD:175532 WormBase:C16C10.7
InParanoid:Q09463 OMA:CNICLDA NextBio:888552 Uniprot:Q09463
Length = 235
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 4 QPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
+P +++ + RFEC+ICL+ KDA+++ CGH FC C+ W+D + N CP+
Sbjct: 11 EPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPV 65
>UNIPROTKB|Q09463 [details] [associations]
symbol:rnf-5 "RING finger protein 5" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005634 GO:GO:0008340 GO:GO:0046872
GO:GO:0030054 GO:GO:0018996 GO:GO:0055120 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:Z46787 GO:GO:0055002
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 PIR:T19328 RefSeq:NP_497830.1
ProteinModelPortal:Q09463 SMR:Q09463 IntAct:Q09463 STRING:Q09463
PaxDb:Q09463 EnsemblMetazoa:C16C10.7 GeneID:175532
KEGG:cel:CELE_C16C10.7 UCSC:C16C10.7 CTD:175532 WormBase:C16C10.7
InParanoid:Q09463 OMA:CNICLDA NextBio:888552 Uniprot:Q09463
Length = 235
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 4 QPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPI 57
+P +++ + RFEC+ICL+ KDA+++ CGH FC C+ W+D + N CP+
Sbjct: 11 EPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPV 65
>ZFIN|ZDB-GENE-040426-1977 [details] [associations]
symbol:rnf185 "ring finger protein 185"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-040426-1977
GO:GO:0016021 GO:GO:0005741 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006914 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HOGENOM:HOG000238304
KO:K10666 CTD:91445 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 OrthoDB:EOG4R7VC8 EMBL:BC059445 IPI:IPI00506188
RefSeq:NP_998202.1 UniGene:Dr.11136 ProteinModelPortal:Q6PC78
Ensembl:ENSDART00000046781 GeneID:406310 KEGG:dre:406310
InParanoid:Q6PC78 NextBio:20817938 Bgee:Q6PC78 Uniprot:Q6PC78
Length = 194
Score = 137 (53.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D FEC+ICL+ KDA+++ CGH FC C+ W++ + + CP+ + +++D + I Y
Sbjct: 36 DSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKV-IPLY 94
Query: 73 TR 74
R
Sbjct: 95 GR 96
>UNIPROTKB|I3LBF4 [details] [associations]
symbol:LOC100737614 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0046330 "positive regulation of JNK cascade"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007250 "activation of NF-kappaB-inducing kinase activity"
evidence=IEA] InterPro:IPR001293 InterPro:IPR002083
InterPro:IPR008974 InterPro:IPR012227 InterPro:IPR027138
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 SUPFAM:SSF49599 GeneTree:ENSGT00550000074359
PANTHER:PTHR10131:SF46 Ensembl:ENSSSCT00000029879 OMA:INDIVTH
Uniprot:I3LBF4
Length = 416
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/149 (26%), Positives = 78/149 (52%)
Query: 315 WKMYNFPAKLKEMK-EINRYFYSACFYSSCFGYRFCTRVNISRE---DAQYLSLFIHLVQ 370
WK+ ++ +L+E K + N +S FY+ +GY+ ++ + +LSL+I ++
Sbjct: 258 WKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYIRVLP 317
Query: 371 GENDDILDWPFVGRIRFTALNTSSEF-----SITDEIQSDKNFDSFKRPVNF--FLNKKA 423
G D++L+WPF R+ F+ L+ S +T+ D N+ +F++P + L++ +
Sbjct: 318 GAFDNLLEWPFARRVTFSLLDQSEPGLAKPQHVTETFHPDPNWKNFQKPGTWRGSLDESS 377
Query: 424 --FGFNNFIRVADVLDPGRGFLMEDDTFV 450
FG+ FI D+ R ++ +D F+
Sbjct: 378 LGFGYPKFISHQDIRK--RNYVRDDAVFI 404
>UNIPROTKB|A2AAZ3 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 eggNOG:NOG238084 IPI:IPI00790532
SMR:A2AAZ3 Ensembl:ENST00000424074 Ensembl:ENST00000424180
Ensembl:ENST00000428404 Ensembl:ENST00000429069
Ensembl:ENST00000434118 Ensembl:ENST00000434862
Ensembl:ENST00000441470 Uniprot:A2AAZ3
Length = 59
Score = 124 (48.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSW 46
NL CS+CLEYLK+ ++ CGH FC ACI W
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRW 56
>UNIPROTKB|H3BPZ9 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC138028 HGNC:HGNC:28856 ChiTaRS:RNF166
Ensembl:ENST00000562544 Bgee:H3BPZ9 Uniprot:H3BPZ9
Length = 148
Score = 124 (48.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 13 LDPRFECSICLE-YLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L+ ++ C ICLE Y + + SCGH FC C+ + V CP+ L D +D
Sbjct: 6 LEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSP-LCPLCR--LPFDPKKVDK 62
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ 111
T E ++ P + C+ ++++ + H+++C LK +
Sbjct: 63 ATHVEKQLSSYKAPCRGCNKKVTLAKMRVHISSC-LKVQE 101
>UNIPROTKB|E5RI62 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL139288 EMBL:AL670729 HGNC:HGNC:13430
IPI:IPI00975887 ProteinModelPortal:E5RI62 SMR:E5RI62
Ensembl:ENST00000520264 ArrayExpress:E5RI62 Bgee:E5RI62
Uniprot:E5RI62
Length = 50
Score = 123 (48.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACID-SWIDVKGK 52
CSICL+Y D ++T+CGH FC ACI SW +GK
Sbjct: 16 CSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGK 50
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-DEKVLTKD-DIFID 70
L+ +C+IC E+ +A+ +C H FC+ CID W K K CPI +++ +K + +D
Sbjct: 5 LENELQCTICSEHFIEAVTLNCAHSFCSYCIDEW--TKRKVECPICRQEIKSKTRSLVLD 62
Query: 71 NYTRREILEN 80
N R ++EN
Sbjct: 63 NCIDR-MVEN 71
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C + G CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENI 65
>UNIPROTKB|A2AE51 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:BX927221 EMBL:CR759838
EMBL:CR788282 EMBL:BX248419 EMBL:CR388382 EMBL:BX927189
HGNC:HGNC:12962 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00790584 SMR:A2AE51 Ensembl:ENST00000415966
Ensembl:ENST00000420345 Ensembl:ENST00000424124
Ensembl:ENST00000438064 Ensembl:ENST00000444979
Ensembl:ENST00000450103 Ensembl:ENST00000451189 Uniprot:A2AE51
Length = 159
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C + G CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENI 65
>UNIPROTKB|Q5SPU2 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00647769
SMR:Q5SPU2 Ensembl:ENST00000415789 Ensembl:ENST00000418026
Ensembl:ENST00000419171 Ensembl:ENST00000419401
Ensembl:ENST00000422881 Ensembl:ENST00000433361
Ensembl:ENST00000433836 Ensembl:ENST00000453442 UCSC:uc003npu.1
HOGENOM:HOG000120116 Uniprot:Q5SPU2
Length = 157
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C + G CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENI 65
>UNIPROTKB|I3LUY7 [details] [associations]
symbol:I3LUY7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00400000022349 PANTHER:PTHR15067:SF3 EMBL:CU855572
Ensembl:ENSSSCT00000029099 OMA:VEMKEHR Uniprot:I3LUY7
Length = 135
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK-VLTKD-DIFID 70
L+ +C IC EY +A+ +C H FC+ CI+ W+ K K CPI K + +K + +D
Sbjct: 47 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKVECPICRKDIKSKTHSLVLD 104
Query: 71 NYTRREILENNLTCPYKQ 88
N + + +NL+ K+
Sbjct: 105 NCINKMV--DNLSSEVKE 120
>MGI|MGI:1914914 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
UniPathway:UPA00143 MGI:MGI:1914914 Prosite:PS00518 GO:GO:0005829
GO:GO:0046872 GO:GO:0008270 Reactome:REACT_107772 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OrthoDB:EOG4SJ5FM
EMBL:AK006569 EMBL:AK050395 EMBL:AC138611 EMBL:BC094290
EMBL:BC116883 EMBL:BC116887 IPI:IPI00137236 IPI:IPI00269061
RefSeq:NP_080577.1 UniGene:Mm.45980 ProteinModelPortal:Q9D9R0
SMR:Q9D9R0 STRING:Q9D9R0 PhosphoSite:Q9D9R0 PRIDE:Q9D9R0
Ensembl:ENSMUST00000050004 GeneID:67664 KEGG:mmu:67664
UCSC:uc008eez.1 UCSC:uc008efa.1 InParanoid:Q0VG32 OMA:VPNENAN
ChiTaRS:RNF125 NextBio:325181 Bgee:Q9D9R0 CleanEx:MM_RNF125
Genevestigator:Q9D9R0 GermOnline:ENSMUSG00000033107 Uniprot:Q9D9R0
Length = 233
Score = 135 (52.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/102 (31%), Positives = 50/102 (49%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
F+CS+CLE L + T CGH FC +CI + I K CP L + + + +R
Sbjct: 35 FDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYLPSEGVPATDIAKRM 94
Query: 77 ILENNLTCPYKQCSSQLSIPEYESHVNTC--YL-KYSQPSVE 115
E C +C + + + + +H+ TC Y+ KY P +E
Sbjct: 95 KSEYQ-NCA--ECGTLVCLSDMRAHIRTCEKYIDKYG-PLLE 132
>UNIPROTKB|F1SME2 [details] [associations]
symbol:F1SME2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR027136 Pfam:PF00917 PROSITE:PS50144 SMART:SM00061
SUPFAM:SSF49599 PANTHER:PTHR10131:SF29 GeneTree:ENSGT00550000074359
EMBL:CU571013 EMBL:AEMK01083462 EMBL:CU466455
Ensembl:ENSSSCT00000006061 OMA:KRCHESA Uniprot:F1SME2
Length = 403
Score = 140 (54.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 335 YSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALN 391
+ FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L+
Sbjct: 279 WDGTFYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLD 338
Query: 392 TSSEFSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVI 451
++ D + D SF+RP + A G F + + P ++ +DDT +
Sbjct: 339 QNNREHAIDAFRPDLTSASFQRPQSE--TNVASGCPLFFPLNKLQSPKHAYV-KDDTMFL 395
Query: 452 K 452
K
Sbjct: 396 K 396
>GENEDB_PFALCIPARUM|PF10_0127 [details] [associations]
symbol:PF10_0127 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR008974 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AE014185 SUPFAM:SSF49599
RefSeq:XP_001347412.2 ProteinModelPortal:Q8IJR5
EnsemblProtists:PF10_0127:mRNA GeneID:810285 KEGG:pfa:PF10_0127
EuPathDB:PlasmoDB:PF3D7_1013000 HOGENOM:HOG000283129
ProtClustDB:CLSZ2446623 Uniprot:Q8IJR5
Length = 520
Score = 126 (49.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIF-IDNYTRR 75
F CS+CL+ ++T C H C C+ + + K CPI ++++ +++ I ++
Sbjct: 28 FICSVCLDLCDTPVITLCNHICCYKCM--YYSLLHKRNCPICKQIIKHNNLKKITGKQKK 85
Query: 76 EILENNLTCPYKQCSSQLSIPEYESHVNTCYLK 108
E E + C C+ ++ I +Y++H+N C K
Sbjct: 86 EYEEIRIKCHL--CNEKIKIKDYKTHINICEYK 116
Score = 60 (26.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHL 368
C+ ++++K F LKE ++N F S +YS F Y N +R YL+ H
Sbjct: 151 CSNLFYFKNRIFMLTLKEKYQLNMRF-SFTYYS--FYYNLLMNTNFNR--LNYLNNIKHH 205
Query: 369 VQGENDD 375
N +
Sbjct: 206 PTNNNSN 212
>UNIPROTKB|Q8IJR5 [details] [associations]
symbol:PF10_0127 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001841 InterPro:IPR008974 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AE014185 SUPFAM:SSF49599
RefSeq:XP_001347412.2 ProteinModelPortal:Q8IJR5
EnsemblProtists:PF10_0127:mRNA GeneID:810285 KEGG:pfa:PF10_0127
EuPathDB:PlasmoDB:PF3D7_1013000 HOGENOM:HOG000283129
ProtClustDB:CLSZ2446623 Uniprot:Q8IJR5
Length = 520
Score = 126 (49.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIF-IDNYTRR 75
F CS+CL+ ++T C H C C+ + + K CPI ++++ +++ I ++
Sbjct: 28 FICSVCLDLCDTPVITLCNHICCYKCM--YYSLLHKRNCPICKQIIKHNNLKKITGKQKK 85
Query: 76 EILENNLTCPYKQCSSQLSIPEYESHVNTCYLK 108
E E + C C+ ++ I +Y++H+N C K
Sbjct: 86 EYEEIRIKCHL--CNEKIKIKDYKTHINICEYK 116
Score = 60 (26.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 309 CNGVYFWKMYNFPAKLKEMKEINRYFYSACFYSSCFGYRFCTRVNISREDAQYLSLFIHL 368
C+ ++++K F LKE ++N F S +YS F Y N +R YL+ H
Sbjct: 151 CSNLFYFKNRIFMLTLKEKYQLNMRF-SFTYYS--FYYNLLMNTNFNR--LNYLNNIKHH 205
Query: 369 VQGENDD 375
N +
Sbjct: 206 PTNNNSN 212
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 118 (46.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 16/52 (30%), Positives = 35/52 (67%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDI 67
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ +
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKV 76
>UNIPROTKB|Q6J211 [details] [associations]
symbol:RNF114 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
HOVERGEN:HBG074331 OMA:IEHIQRR EMBL:AADN02018900 EMBL:AY604724
IPI:IPI00571552 UniGene:Gga.20085 Ensembl:ENSGALT00000013014
InParanoid:Q6J211 Uniprot:Q6J211
Length = 225
Score = 133 (51.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 31/114 (27%), Positives = 50/114 (43%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRR 75
R C +CLE + + CGH FC C+ + K K C + VLT +D
Sbjct: 23 RLTCPVCLEVFESPVRVPCGHVFCTPCLQECLKPK-KPVCGVCRGVLTAGSRALD---LE 78
Query: 76 EILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDITDSPTSSFRN 127
+++E+ T C ++ + + SH +C Y Y V+ +T P + RN
Sbjct: 79 QLIESTETA-CSGCGKKMFLSKMRSHAASCSKYQNYIMEGVKAVTKEPVHNARN 131
>UNIPROTKB|I3LS75 [details] [associations]
symbol:I3LS75 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051092 "positive regulation of NF-kappaB transcription
factor activity" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR027136 Pfam:PF00917 PROSITE:PS50144 SMART:SM00061
SUPFAM:SSF49599 PANTHER:PTHR10131:SF29 GeneTree:ENSGT00550000074359
EMBL:CU571013 EMBL:AEMK01083462 EMBL:CU466455
Ensembl:ENSSSCT00000023007 Uniprot:I3LS75
Length = 413
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 34/117 (29%), Positives = 61/117 (52%)
Query: 339 FYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE 395
FY++ +GY+ C R+ ++ + +LSLFI +++GE D +L WPF ++ F L+ ++
Sbjct: 293 FYTAKYGYKLCLRLYLNGDGTGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNR 352
Query: 396 FSITDEIQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIK 452
D + D SF+RP + A G F + + P ++ +DDT +K
Sbjct: 353 EHAIDAFRPDLTSASFQRPQSE--TNVASGCPLFFPLNKLQSPKHAYV-KDDTMFLK 406
>RGD|1306757 [details] [associations]
symbol:Rnf125 "ring finger protein 125" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 RGD:1306757 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 EMBL:CH473974
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946 CTD:54941
eggNOG:NOG46770 HOVERGEN:HBG098958 KO:K12170 OMA:RTRCGHV
OrthoDB:EOG4SJ5FM EMBL:BC162061 IPI:IPI00870006
RefSeq:NP_001101894.1 UniGene:Rn.163367 STRING:B1WCA3
Ensembl:ENSRNOT00000021136 GeneID:361296 KEGG:rno:361296
NextBio:675857 Genevestigator:B1WCA3 Uniprot:B1WCA3
Length = 233
Score = 133 (51.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
F+CS+CLE L + T CGH FC +CI + I K CP L + + + +R
Sbjct: 35 FDCSVCLEVLHQPVRTRCGHVFCRSCIATSIKNNNKWTCPYCRAYLPSEGVPATDIAKRM 94
Query: 77 ILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY 109
E C +C + + + + +H+ TC KY
Sbjct: 95 KSEYQ-NCT--ECGTLVCLSDMRAHIRTCE-KY 123
>UNIPROTKB|B1AMX7 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0005174 "CD40
receptor binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR027133
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005938 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0045121 GO:GO:0030163 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL355987 GO:GO:0033209
GO:GO:0046328 GO:GO:0009898 InterPro:IPR017907 GO:GO:0043623
GO:GO:0035631 GO:GO:0051023 GO:GO:0034351 EMBL:AL449425
IPI:IPI00970988 UniGene:Hs.522506 HGNC:HGNC:12032
PANTHER:PTHR10131:SF21 SMR:B1AMX7 Ensembl:ENST00000419057
HOGENOM:HOG000171265 Uniprot:B1AMX7
Length = 172
Score = 123 (48.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 31/109 (28%), Positives = 49/109 (44%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 28 LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILS-SGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ 111
F DN RRE+ CP C+ + ++ EYES H C L ++
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTE 135
>UNIPROTKB|A2AAZ6 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HOVERGEN:HBG001357
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00643713 SMR:A2AAZ6 Ensembl:ENST00000428728
Ensembl:ENST00000431871 Ensembl:ENST00000440130
Ensembl:ENST00000442914 Ensembl:ENST00000447077
Ensembl:ENST00000449396 Ensembl:ENST00000450421 Uniprot:A2AAZ6
Length = 261
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>UNIPROTKB|E1BW11 [details] [associations]
symbol:TRAF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001817 "regulation of cytokine production"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008063 "Toll signaling pathway" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0033209 "tumor necrosis factor-mediated signaling
pathway" evidence=IEA] [GO:0045087 "innate immune response"
evidence=IEA] [GO:0050688 "regulation of defense response to virus"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR027128
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF45
EMBL:AADN02003763 EMBL:AADN02003761 EMBL:AADN02003762
IPI:IPI00570962 Ensembl:ENSGALT00000018576 Uniprot:E1BW11
Length = 378
Score = 137 (53.3 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
++ +++C C L + T CGH+FC C+++ + C ++ + KD +F DN
Sbjct: 46 VEDKYKCEKCHFILCNPKQTECGHRFCETCMNALLSTPSPK-CTACQESIVKDKVFKDNC 104
Query: 73 TRREILENNLTC--PYKQCSSQLSIPEYESHVNT 104
RRE+L + C K C QLS+ + H+ T
Sbjct: 105 CRRELLALQIYCRNENKGCKEQLSLGQLLMHLKT 138
>UNIPROTKB|A4IFA2 [details] [associations]
symbol:LNX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00595
InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 GeneTree:ENSGT00650000092901
CTD:84708 eggNOG:NOG236845 HOGENOM:HOG000261605 HOVERGEN:HBG039539
KO:K10692 OMA:LQHCKKS OrthoDB:EOG48KR9R EMBL:DAAA02017684
EMBL:DAAA02017685 EMBL:DAAA02017686 EMBL:DAAA02017687 EMBL:BC134476
IPI:IPI00698894 RefSeq:NP_001069702.2 UniGene:Bt.56185 SMR:A4IFA2
STRING:A4IFA2 Ensembl:ENSBTAT00000027531 GeneID:540694
KEGG:bta:540694 InParanoid:A4IFA2 NextBio:20878778 Uniprot:A4IFA2
Length = 731
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++D C ICL+ L D + T CGH +C C+ +++ V+ K++CP+D K L N
Sbjct: 38 DVDDDLICHICLQALLDPLDTPCGHTYCTVCLTNFL-VE-KDFCPVDRKPLVLQHCKKSN 95
Query: 72 YTRREILENNL-TCPYKQ-CSSQLSIPEYESHVNT 104
++L L TCP+ + C+ L + E H T
Sbjct: 96 ILVNKLLNKLLVTCPFTEHCTEVLQRCDLEHHFQT 130
>ZFIN|ZDB-GENE-060228-2 [details] [associations]
symbol:lnx2a "ligand of numb-protein X 2a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
ZFIN:ZDB-GENE-060228-2 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
InterPro:IPR017907 GeneTree:ENSGT00650000092901 KO:K10692
OMA:EKDFCPL EMBL:BX571696 IPI:IPI00491636 RefSeq:NP_001106696.2
UniGene:Dr.82850 Ensembl:ENSDART00000046211 GeneID:553331
KEGG:dre:553331 CTD:553331 NextBio:20880097 ArrayExpress:F1R5N4
Bgee:F1R5N4 Uniprot:F1R5N4
Length = 737
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 42/144 (29%), Positives = 70/144 (48%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
N +L +D C ICL+ L + T CGH FCA C+ S++ + +++CP+D L
Sbjct: 38 NYRLEVDDDLVCHICLQPLVQPLDTPCGHTFCARCLRSFL--QERDFCPLDRAHLQLQVC 95
Query: 68 FIDNYTRREILEN-NLTCPYKQCSSQLSIP--EYESHV-NTCYLKYSQPSVEDITDSPTS 123
+ ++L+ ++TCP S LS+P + E+H+ + C SQ + + T S
Sbjct: 96 RRSSILVHKLLDKLSVTCPLTP-SCSLSMPRCDLEAHLKHRCPGTQSQRTKLERTQMEGS 154
Query: 124 SFRNTSGIPTNKRNSKILTVTVFP 147
R T+ P ++I T P
Sbjct: 155 EDRVTATNPPKSPQTEIKEDTPSP 178
>MGI|MGI:1915968 [details] [associations]
symbol:Rnf166 "ring finger protein 166" species:10090 "Mus
musculus" [GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
MGI:MGI:1915968 Prosite:PS00518 Pfam:PF05605 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
PROSITE:PS50330 InterPro:IPR017907 InterPro:IPR008598
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 CTD:115992 eggNOG:NOG149065 OrthoDB:EOG4DJJX8
OMA:LVKHCVD EMBL:AK151813 IPI:IPI00355332 RefSeq:NP_001028314.1
UniGene:Mm.34356 UniGene:Mm.458434 ProteinModelPortal:Q3U9F6
SMR:Q3U9F6 PhosphoSite:Q3U9F6 PRIDE:Q3U9F6
Ensembl:ENSMUST00000014614 GeneID:68718 KEGG:mmu:68718
InParanoid:Q3U9F6 NextBio:327750 Bgee:Q3U9F6 CleanEx:MM_RNF166
Genevestigator:Q3U9F6 GermOnline:ENSMUSG00000014470 Uniprot:Q3U9F6
Length = 237
Score = 132 (51.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 7 ANNKLNLDPRFECSICLE-YLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD 65
A L+ +F C ICLE Y + + SCGH FC C+ + V CP+ L D
Sbjct: 21 AGGDSGLEAQFSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSP-LCPLCR--LPFD 77
Query: 66 DIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ 111
+D T E ++ P + C+ ++++ + +H+++C LK +
Sbjct: 78 PKKVDKATHVEKQLSSYKAPCRGCNKKVTLAKMRAHISSC-LKVQE 122
>RGD|1302950 [details] [associations]
symbol:Rnf166 "ring finger protein 166" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
RGD:1302950 Prosite:PS00518 Pfam:PF05605 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
PROSITE:PS50330 InterPro:IPR017907 InterPro:IPR008598
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 CTD:115992 eggNOG:NOG149065 OrthoDB:EOG4DJJX8
OMA:LVKHCVD EMBL:AY606065 EMBL:BC100057 IPI:IPI00197564
RefSeq:NP_001002279.1 UniGene:Rn.43927 ProteinModelPortal:Q6J1I7
SMR:Q6J1I7 Ensembl:ENSRNOT00000018591 GeneID:365022 KEGG:rno:365022
UCSC:RGD:1302950 InParanoid:Q6J1I7 NextBio:686491
Genevestigator:Q6J1I7 GermOnline:ENSRNOG00000013777 Uniprot:Q6J1I7
Length = 237
Score = 132 (51.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 30/106 (28%), Positives = 52/106 (49%)
Query: 7 ANNKLNLDPRFECSICLE-YLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD 65
A L+ +F C ICLE Y + + SCGH FC C+ + V CP+ L D
Sbjct: 21 AGGDSGLEAQFSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSP-LCPLCR--LPFD 77
Query: 66 DIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ 111
+D T E ++ P + C+ ++++ + +H+++C LK +
Sbjct: 78 PKKVDKATHVEKQLSSYKAPCRGCNKKVTLAKMRAHISSC-LKVQE 122
>UNIPROTKB|J3KNZ3 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL139288 EMBL:AL670729 HGNC:HGNC:13430
Ensembl:ENST00000355586 Uniprot:J3KNZ3
Length = 175
Score = 123 (48.4 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACID-SWIDVKGK 52
CSICL+Y D ++T+CGH FC ACI SW +GK
Sbjct: 16 CSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGK 50
>UNIPROTKB|Q6ZMN7 [details] [associations]
symbol:PDZRN4 "PDZ domain-containing RING finger protein 4"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478
InterPro:IPR008974 InterPro:IPR013323 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF50156 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 HOGENOM:HOG000231379 HOVERGEN:HBG053554
KO:K15682 eggNOG:NOG284098 OrthoDB:EOG4T1HM7 EMBL:AC090531
EMBL:AC021651 EMBL:AK131554 EMBL:BC040922 EMBL:BC093744
EMBL:BC093746 EMBL:BX640695 EMBL:AL133067 IPI:IPI00216864
IPI:IPI00549996 IPI:IPI00747292 PIR:T42667 RefSeq:NP_001158067.1
RefSeq:NP_037509.3 UniGene:Hs.380044 ProteinModelPortal:Q6ZMN7
SMR:Q6ZMN7 IntAct:Q6ZMN7 STRING:Q6ZMN7 PhosphoSite:Q6ZMN7
DMDM:116242741 PaxDb:Q6ZMN7 PeptideAtlas:Q6ZMN7 PRIDE:Q6ZMN7
Ensembl:ENST00000298919 Ensembl:ENST00000402685
Ensembl:ENST00000539469 GeneID:29951 KEGG:hsa:29951 UCSC:uc001rmq.4
UCSC:uc001rmr.3 UCSC:uc009zjz.3 CTD:29951 GeneCards:GC12P041582
HGNC:HGNC:30552 HPA:HPA039510 MIM:609730 neXtProt:NX_Q6ZMN7
PharmGKB:PA134974780 InParanoid:Q6ZMN7 OMA:TANEVEQ ChiTaRS:PDZRN4
GenomeRNAi:29951 NextBio:52645 ArrayExpress:Q6ZMN7 Bgee:Q6ZMN7
CleanEx:HS_PDZRN4 Genevestigator:Q6ZMN7 GermOnline:ENSG00000165966
Uniprot:Q6ZMN7
Length = 1036
Score = 143 (55.4 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP EC +C + L++ + T CGH FCA+C+ W V+ + CP+ + L +++
Sbjct: 12 VDPALECKLCGQVLEEPLCTPCGHVFCASCLLPWA-VRRRR-CPLQCQPLAPGELYRVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
R I + + C Y+ C + + E E+HV C
Sbjct: 70 LRSLIQKLRVQCDYRARGCGHSVRLHELEAHVEHC 104
Score = 44 (20.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 245 GDDKSSEGDCSCKTCGDN-SHLLKLVYERMVLLEQSMLEQKIKVNNF--ELNLKQTEEIE 301
G+D + + D ++ LV + L++ LE + N F ELNL+ EE
Sbjct: 458 GEDVQNREEAVALLSNDECKRIVLLVARPEIQLDEGWLEDER--NEFLEELNLEMLEEEH 515
Query: 302 DNVVLKLCNGV 312
+ + N V
Sbjct: 516 NEAMQPTANEV 526
Score = 43 (20.2 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 366 IHLVQGENDDILDWPFVG-RIRFTALNTSSEFSITDEIQSDKNFDS-FKRPVNFFLNKK 422
I + +G+ DDI++ P + +A NT+ T + D++ DS R +N NKK
Sbjct: 714 IDMQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTP-LTVDRSPDSSLPRVINL-TNKK 770
>UNIPROTKB|K7GL56 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063064 EMBL:CU019565
Ensembl:ENSSSCT00000035939 Uniprot:K7GL56
Length = 206
Score = 128 (50.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
F+CS+CLE L + T CGH FC +CI + + K CP L + + + +R
Sbjct: 35 FDCSVCLEVLHHPVRTRCGHVFCRSCIATSLK-NNKWTCPYCRAYLPSEGVPATDVAKRM 93
Query: 77 ILE-NNLTCPYKQCSSQLSIPEYESHVNTCYLKY 109
E N T +C + + + E +H+ TC KY
Sbjct: 94 KSEFQNCT----ECDTLVCLSEMRAHIRTCQ-KY 122
>FB|FBgn0030693 [details] [associations]
symbol:CG8974 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 OrthoDB:EOG4QBZN7 EMBL:AY060297
RefSeq:NP_573076.1 RefSeq:NP_727896.1 RefSeq:NP_727897.1
RefSeq:NP_996448.1 RefSeq:NP_996449.1 UniGene:Dm.7984 SMR:Q9VXP1
STRING:Q9VXP1 EnsemblMetazoa:FBtr0074185 EnsemblMetazoa:FBtr0074186
EnsemblMetazoa:FBtr0074187 EnsemblMetazoa:FBtr0074188
EnsemblMetazoa:FBtr0074189 GeneID:32532 KEGG:dme:Dmel_CG8974
UCSC:CG8974-RA FlyBase:FBgn0030693 InParanoid:Q9VXP1 OMA:ENNDETS
GenomeRNAi:32532 NextBio:778955 Uniprot:Q9VXP1
Length = 277
Score = 131 (51.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D +EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + I Y
Sbjct: 120 DSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKV-IPLY 178
Query: 73 TR 74
R
Sbjct: 179 GR 180
>FB|FBgn0052581 [details] [associations]
symbol:CG32581 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:COG5574 KO:K10666
GeneTree:ENSGT00390000014107 EMBL:BT082041 RefSeq:NP_001096988.2
RefSeq:NP_727898.2 UniGene:Dm.33538 SMR:Q8IR26 IntAct:Q8IR26
MINT:MINT-741955 STRING:Q8IR26 EnsemblMetazoa:FBtr0074184
EnsemblMetazoa:FBtr0113439 GeneID:318098 KEGG:dme:Dmel_CG32581
UCSC:CG32581-RA FlyBase:FBgn0052581 InParanoid:Q8IR26
OrthoDB:EOG4QBZN7 GenomeRNAi:318098 NextBio:844797 Uniprot:Q8IR26
Length = 283
Score = 131 (51.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDIFIDNY 72
D +EC+ICL+ KDA+++ CGH FC C+ W+ + + CP+ + + KD + I Y
Sbjct: 120 DSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKV-IPLY 178
Query: 73 TR 74
R
Sbjct: 179 GR 180
>UNIPROTKB|Q3B891 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 UniGene:Hs.194143 HGNC:HGNC:1100 ChiTaRS:BRCA1
GO:GO:0043009 GO:GO:0009048 GO:GO:0007098 HOGENOM:HOG000142477
HOVERGEN:HBG061757 EMBL:BC106745 IPI:IPI00946108 SMR:Q3B891
STRING:Q3B891 Ensembl:ENST00000494123 Uniprot:Q3B891
Length = 473
Score = 135 (52.6 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 77/298 (25%), Positives = 127/298 (42%)
Query: 9 NKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDD 66
N +N + EC ICLE +K+ + T C H FC C+ ++ K G + CP+ + +TK
Sbjct: 13 NVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
Query: 67 IFIDNYTR-REILENNLTCPYKQCSSQLSIP-EYESHVNTCYLKYSQPSVEDITDSPTSS 124
+ TR +++E L C+ QL EY + N + K S E + D S
Sbjct: 73 L--QESTRFSQLVEELLKII---CAFQLDTGLEYANSYN--FAKKENNSPEHLKDEV--S 123
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
+ G R ++L PE+ ++Q +S + +G +++ ++
Sbjct: 124 IIQSMGY--RNRAKRLLQSE--PENPSLQETS---LSVQLSNLGTVRTLRTKQRIQPQ-- 174
Query: 185 LKTSFHLEL-------LFNK--YCSDGSQSTN--TPSHGRQDTS--NQKEI-----EAYL 226
KTS ++EL NK YCS G Q TP R + S + K+ E +
Sbjct: 175 -KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDV 233
Query: 227 MKNKEHESKLWDPN--KNQAGD---DK---SSEGDCSCKTCGDNSHLLKLVYERMVLL 276
+ H+ D N + +A + +K SS + + CG N+H L +E LL
Sbjct: 234 TNTEHHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLL 291
>ZFIN|ZDB-GENE-070912-227 [details] [associations]
symbol:ftr05 "finTRIM family, member 5"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-227 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00513408
Ensembl:ENSDART00000146444 OMA:ERTRCEV Uniprot:B0S721
Length = 292
Score = 131 (51.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 6 VANNKLNL--DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDV---KGKNYCPIDEK 60
+A + ++L + +F CSICL+ LKD CGH FC +CI + D KG CP +
Sbjct: 1 MAESSVSLAQEDQFNCSICLDLLKDPAAIPCGHSFCMSCISGYWDQDEQKGVYSCPQCRQ 60
Query: 61 VLTKDDIFIDNYTRREILEN 80
T + N+ E++EN
Sbjct: 61 TFTPRPVLGKNFILTEVVEN 80
>UNIPROTKB|F1SAL7 [details] [associations]
symbol:LOC100517591 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 InterPro:IPR017907 GeneTree:ENSGT00530000063064
KO:K12170 OMA:RTRCGHV EMBL:CU019565 RefSeq:XP_003127936.2
Ensembl:ENSSSCT00000004129 GeneID:100517591 KEGG:ssc:100517591
Uniprot:F1SAL7
Length = 232
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/94 (31%), Positives = 46/94 (48%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
F+CS+CLE L + T CGH FC +CI + + K CP L + + + +R
Sbjct: 35 FDCSVCLEVLHHPVRTRCGHVFCRSCIATSLK-NNKWTCPYCRAYLPSEGVPATDVAKRM 93
Query: 77 ILE-NNLTCPYKQCSSQLSIPEYESHVNTCYLKY 109
E N T +C + + + E +H+ TC KY
Sbjct: 94 KSEFQNCT----ECDTLVCLSEMRAHIRTCQ-KY 122
>RGD|1303115 [details] [associations]
symbol:Trim39 "tripartite motif-containing 39" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Pfam:PF00097 RGD:1303115 Prosite:PS00518
GO:GO:0005829 GO:GO:0005739 GO:GO:0006915 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOGENOM:HOG000234133
HOVERGEN:HBG001357 GeneTree:ENSGT00700000104307 CTD:56658
eggNOG:NOG238084 KO:K12015 OrthoDB:EOG480HWD EMBL:BX883050
IPI:IPI00417367 RefSeq:NP_998727.1 UniGene:Rn.229996
ProteinModelPortal:Q6MFZ5 SMR:Q6MFZ5 STRING:Q6MFZ5
Ensembl:ENSRNOT00000001021 GeneID:309591 KEGG:rno:309591
UCSC:RGD:1303115 InParanoid:Q6MFZ5 NextBio:661022
ArrayExpress:Q6MFZ5 Genevestigator:Q6MFZ5
GermOnline:ENSRNOG00000000785 Uniprot:Q6MFZ5
Length = 488
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
>UNIPROTKB|E7EWN5 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0007420 GO:GO:0032355
GO:GO:0005759 GO:GO:0046872 GO:GO:0003684 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000794 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00930098
ProteinModelPortal:E7EWN5 SMR:E7EWN5 Ensembl:ENST00000470026
ArrayExpress:E7EWN5 Bgee:E7EWN5 Uniprot:E7EWN5
Length = 649
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 77/298 (25%), Positives = 127/298 (42%)
Query: 9 NKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDD 66
N +N + EC ICLE +K+ + T C H FC C+ ++ K G + CP+ + +TK
Sbjct: 13 NVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
Query: 67 IFIDNYTR-REILENNLTCPYKQCSSQLSIP-EYESHVNTCYLKYSQPSVEDITDSPTSS 124
+ TR +++E L C+ QL EY + N + K S E + D S
Sbjct: 73 L--QESTRFSQLVEELLKII---CAFQLDTGLEYANSYN--FAKKENNSPEHLKDEV--S 123
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
+ G R ++L PE+ ++Q +S + +G +++ ++
Sbjct: 124 IIQSMGY--RNRAKRLLQSE--PENPSLQETS---LSVQLSNLGTVRTLRTKQRIQPQ-- 174
Query: 185 LKTSFHLEL-------LFNK--YCSDGSQSTN--TPSHGRQDTS--NQKEI-----EAYL 226
KTS ++EL NK YCS G Q TP R + S + K+ E +
Sbjct: 175 -KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDV 233
Query: 227 MKNKEHESKLWDPN--KNQAGD---DK---SSEGDCSCKTCGDNSHLLKLVYERMVLL 276
+ H+ D N + +A + +K SS + + CG N+H L +E LL
Sbjct: 234 TNTEHHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLL 291
>FB|FBgn0036546 [details] [associations]
symbol:elgi "early girl" species:7227 "Drosophila
melanogaster" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031386
"protein tag" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051445 "regulation of meiotic cell cycle"
evidence=IMP] InterPro:IPR001841 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015036 Pfam:PF08941 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:AE014296 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0031386 SUPFAM:SSF49599 GO:GO:0051445
Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647 eggNOG:NOG254243
KO:K11981 OMA:CHERRWP EMBL:AY051931 RefSeq:NP_648816.1
UniGene:Dm.972 SMR:Q9VUV7 STRING:Q9VUV7 EnsemblMetazoa:FBtr0075510
EnsemblMetazoa:FBtr0333573 GeneID:39735 KEGG:dme:Dmel_CG17033
UCSC:CG17033-RA CTD:39735 FlyBase:FBgn0036546 InParanoid:Q9VUV7
OrthoDB:EOG483BM6 GenomeRNAi:39735 NextBio:815115 Uniprot:Q9VUV7
Length = 315
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/105 (29%), Positives = 49/105 (46%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
+D C IC L+D + C H FC CI+ W+ + CP+D LT ++
Sbjct: 12 VDEELTCPICSGVLEDPLQAVMCEHAFCRGCINEWLTRQPT--CPVDRNSLTTANLRAVP 69
Query: 72 YTRREILEN-NLTC---PYKQCSSQLSIPEYESHVNTCYLKYSQP 112
R +L ++TC PY C++ L + Y SH++ C +P
Sbjct: 70 RILRNLLSRLSITCDNAPYG-CTAVLKLDAYNSHLDECIHNPKRP 113
>ZFIN|ZDB-GENE-070424-55 [details] [associations]
symbol:ftr61 "finTRIM family, member 61"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070424-55 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862 EMBL:BC134866
IPI:IPI00760180 UniGene:Dr.90118 ProteinModelPortal:A4QN45
NextBio:20889962 Uniprot:A4QN45
Length = 548
Score = 139 (54.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSW-IDVKGKNY-CPIDEKVLTKDDIF 68
N D F CSICL+ LKD ++ SCGH+FC +CI D W ++ + + Y CP + T
Sbjct: 5 NQDQEFSCSICLDLLKDPVILSCGHRFCMSCITDCWNLEDQKRVYSCPQCRQTFTPRPAL 64
Query: 69 IDNYTRREILE 79
N E+LE
Sbjct: 65 NKNVILTEMLE 75
Score = 38 (18.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 243 QAGDDKSSEGDCSCKTCGDNSHLLKLVYERMVLL 276
Q D + GD C C LK V +V L
Sbjct: 83 QTADCYAGSGDVECDVC--TGRKLKAVKSCLVCL 114
>UNIPROTKB|B1AMX8 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0005174 "CD40
receptor binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR027133
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005938 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0045121 GO:GO:0030163 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL355987 GO:GO:0033209
GO:GO:0046328 GO:GO:0009898 InterPro:IPR017907 GO:GO:0043623
GO:GO:0035631 GO:GO:0051023 GO:GO:0034351 EMBL:AL449425
UniGene:Hs.522506 HGNC:HGNC:12032 PANTHER:PTHR10131:SF21
HOGENOM:HOG000171265 IPI:IPI00647767 SMR:B1AMX8
Ensembl:ENST00000429509 Uniprot:B1AMX8
Length = 193
Score = 123 (48.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 31/109 (28%), Positives = 49/109 (44%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 28 LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILS-SGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYES-HVNTCYLKYSQ 111
F DN RRE+ CP C+ + ++ EYES H C L ++
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEYESCHEGRCPLMLTE 135
>UNIPROTKB|E1BX70 [details] [associations]
symbol:RNF151 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR008974 InterPro:IPR013323
PROSITE:PS50089 PROSITE:PS50145 SMART:SM00184 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00530000063647 EMBL:AADN02024876
IPI:IPI00601918 Ensembl:ENSGALT00000025714 OMA:HERECEY
Uniprot:E1BX70
Length = 244
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/96 (31%), Positives = 46/96 (47%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIF-IDNYTRREI 77
CSIC + L+D + C H FC ACI W+ V N CP D +V+ + + Y + ++
Sbjct: 18 CSICRDVLEDPLQAPCEHAFCTACIHGWL-VHHSN-CPEDRQVIDVSVLRPLYRYMKNDL 75
Query: 78 LENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYSQ 111
L C ++ C S+ + H C +YSQ
Sbjct: 76 NRLQLHCKNREYGCEMVCSLESIDRHEREC--EYSQ 109
>UNIPROTKB|Q8TBB1 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 GO:GO:0051260 Gene3D:3.30.40.10
InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842 InterPro:IPR017907
GO:GO:0042787 EMBL:AF237782 EMBL:AY358326 EMBL:AK056823
EMBL:AC058822 EMBL:AC095040 EMBL:BC022983 EMBL:BC034737
IPI:IPI00152181 IPI:IPI00305598 RefSeq:NP_001119800.1
RefSeq:NP_116011.2 UniGene:Hs.518760 PDB:3B76 PDBsum:3B76
ProteinModelPortal:Q8TBB1 SMR:Q8TBB1 IntAct:Q8TBB1
MINT:MINT-1441889 STRING:Q8TBB1 PhosphoSite:Q8TBB1 DMDM:29840786
PaxDb:Q8TBB1 PRIDE:Q8TBB1 DNASU:84708 Ensembl:ENST00000263925
Ensembl:ENST00000306888 Ensembl:ENST00000513421 GeneID:84708
KEGG:hsa:84708 UCSC:uc003haf.4 UCSC:uc003hag.4 CTD:84708
GeneCards:GC04M054325 HGNC:HGNC:6657 HPA:HPA002235 MIM:609732
neXtProt:NX_Q8TBB1 PharmGKB:PA30419 eggNOG:NOG236845
HOGENOM:HOG000261605 HOVERGEN:HBG039539 InParanoid:Q8TBB1 KO:K10692
OMA:LQHCKKS PhylomeDB:Q8TBB1 EvolutionaryTrace:Q8TBB1
GenomeRNAi:84708 NextBio:74806 ArrayExpress:Q8TBB1 Bgee:Q8TBB1
CleanEx:HS_LNX1 Genevestigator:Q8TBB1 GermOnline:ENSG00000072201
Uniprot:Q8TBB1
Length = 728
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+D C ICL+ L D + T CGH +C C+ +++ V+ K++CP+D K L +
Sbjct: 35 VDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFL-VE-KDFCPMDRKPLVLQHCKKSSI 92
Query: 73 TRREILENNL-TCPYKQ-CSSQLSIPEYESHVNT 104
++L L TCP+++ C+ L + E H T
Sbjct: 93 LVNKLLNKLLVTCPFREHCTQVLQRCDLEHHFQT 126
>UNIPROTKB|Q4U5R4 [details] [associations]
symbol:RNF114 "RING finger protein 114" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 Prosite:PS00518 Pfam:PF05605 GO:GO:0007275
GO:GO:0030154 GO:GO:0046872 GO:GO:0008270 GO:GO:0007283
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 EMBL:DQ010409 EMBL:BC102412
EMBL:BT030581 IPI:IPI00712043 RefSeq:NP_001019702.1
UniGene:Bt.64649 ProteinModelPortal:Q4U5R4
Ensembl:ENSBTAT00000039156 GeneID:513479 KEGG:bta:513479 CTD:55905
eggNOG:NOG145063 GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 InParanoid:Q4U5R4 KO:K15697 OMA:IEHIQRR
OrthoDB:EOG4CVG7Q NextBio:20870874 Uniprot:Q4U5R4
Length = 230
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/121 (26%), Positives = 51/121 (42%)
Query: 14 DP--RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
DP RF C +CLE + + CGH FC+AC+ + K K C + L ++
Sbjct: 24 DPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPK-KPVCGVCRSALAPGVRAVE- 81
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI 131
R+I +C C + + +HV TC KY +E + + + R +
Sbjct: 82 -LERQIESTETSC--HGCRKNFFLSKIRAHVATCS-KYQNYIMEGVKATTKDASRQPRSV 137
Query: 132 P 132
P
Sbjct: 138 P 138
>UNIPROTKB|Q96EQ8 [details] [associations]
symbol:RNF125 "E3 ubiquitin-protein ligase RNF125"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0032480 "negative regulation of type I interferon production"
evidence=TAS] [GO:0045087 "innate immune response" evidence=TAS]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 UniPathway:UPA00143 Prosite:PS00518
Reactome:REACT_6900 GO:GO:0046872 GO:GO:0008270 GO:GO:0045087
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0032480 HOGENOM:HOG000230946 EMBL:AK000463
EMBL:BC012021 IPI:IPI00410652 RefSeq:NP_060301.2 UniGene:Hs.633703
ProteinModelPortal:Q96EQ8 SMR:Q96EQ8 IntAct:Q96EQ8 STRING:Q96EQ8
PhosphoSite:Q96EQ8 DMDM:143811449 PRIDE:Q96EQ8
Ensembl:ENST00000217740 GeneID:54941 KEGG:hsa:54941 UCSC:uc002kxf.1
CTD:54941 GeneCards:GC18P029598 H-InvDB:HIX0014384 HGNC:HGNC:21150
HPA:HPA041514 MIM:610432 neXtProt:NX_Q96EQ8 PharmGKB:PA134950383
eggNOG:NOG46770 HOVERGEN:HBG098958 InParanoid:Q96EQ8 KO:K12170
OMA:RTRCGHV OrthoDB:EOG4SJ5FM PhylomeDB:Q96EQ8 GenomeRNAi:54941
NextBio:58082 Bgee:Q96EQ8 CleanEx:HS_RNF125 Genevestigator:Q96EQ8
GermOnline:ENSG00000101695 Uniprot:Q96EQ8
Length = 232
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
F+C++CLE L + T CGH FC +CI + + K CP L + + + +R
Sbjct: 35 FDCAVCLEVLHQPVRTRCGHVFCRSCIATSLK-NNKWTCPYCRAYLPSEGVPATDVAKRM 93
Query: 77 ILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY 109
E C +C + + + E +H+ TC KY
Sbjct: 94 KSEYK-NCA--ECDTLVCLSEMRAHIRTCQ-KY 122
>ZFIN|ZDB-GENE-060421-3827 [details] [associations]
symbol:btr32 "bloodthirsty-related gene family,
member 32" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060421-3827 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
OrthoDB:EOG4KWJSP eggNOG:NOG291505 HOGENOM:HOG000234136
HOVERGEN:HBG106862 GeneTree:ENSGT00660000095328 EMBL:CU914158
EMBL:BC115345 IPI:IPI00758736 RefSeq:XP_003201305.1
UniGene:Dr.89408 SMR:Q1RLP5 Ensembl:ENSDART00000076048
GeneID:678629 KEGG:dre:678629 CTD:678629 NextBio:20902445
Uniprot:Q1RLP5
Length = 531
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-DEKVLTK 64
+A++ + L+ +CSICL+ D + T CGH FC C+D + CPI EK +
Sbjct: 1 MASSSVLLNEELQCSICLDVFTDPVTTPCGHNFCRTCLDQYWTNTHTCCCPICKEKFSKQ 60
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
D+ + N T RE++++ + Q QLS+ E E + C
Sbjct: 61 PDLKV-NTTLREVVQH-----FNQ---QLSLGESEVLCDIC 92
>TAIR|locus:2016437 [details] [associations]
symbol:AT1G19310 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P38398 EMBL:AC025808 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 EMBL:AY057705 EMBL:AY116959
EMBL:AY085230 IPI:IPI00544945 PIR:E86326 RefSeq:NP_564078.1
UniGene:At.16708 ProteinModelPortal:Q9LN67 SMR:Q9LN67 IntAct:Q9LN67
EnsemblPlants:AT1G19310.1 GeneID:838513 KEGG:ath:AT1G19310
TAIR:At1g19310 InParanoid:Q9LN67 OMA:NANPWFM PhylomeDB:Q9LN67
ProtClustDB:CLSN2917022 Genevestigator:Q9LN67 Uniprot:Q9LN67
Length = 226
Score = 125 (49.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKD 65
NN N FEC+ICL+ +D I+T CGH FC C+ W+ + ++ CP+ + V+ +D
Sbjct: 14 NN--NDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVIEED 70
>UNIPROTKB|F1N0B8 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 GeneTree:ENSGT00390000014107
OMA:FQSFGDT EMBL:DAAA02055357 IPI:IPI00699444 UniGene:Bt.1678
Ensembl:ENSBTAT00000035701 Uniprot:F1N0B8
Length = 180
Score = 120 (47.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 16/52 (30%), Positives = 36/52 (69%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDI 67
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++++
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISRENV 76
>UNIPROTKB|E9PBZ8 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:AL662832 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00643713 SMR:E9PBZ8
Ensembl:ENST00000546617 Ensembl:ENST00000548540
Ensembl:ENST00000549051 Ensembl:ENST00000549269
Ensembl:ENST00000550625 Ensembl:ENST00000552165 Uniprot:E9PBZ8
Length = 411
Score = 134 (52.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV-LDP 438
I+ +KNF +F R +F +K I ADV LDP
Sbjct: 282 IELEKNFSNFPR--QYFALRKIL--KQLI--ADVTLDP 313
>UNIPROTKB|K7GNS2 [details] [associations]
symbol:K7GNS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000034844 Uniprot:K7GNS2
Length = 250
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCPI 57
L C ICL+YL+D + T CGH FC +CI W D++G CP+
Sbjct: 10 LQAEASCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPV 55
>UNIPROTKB|J9PBI0 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
CTD:54941 KO:K12170 OMA:RTRCGHV EMBL:AAEX03005423
RefSeq:XP_547620.3 Ensembl:ENSCAFT00000044835 GeneID:490498
KEGG:cfa:490498 Uniprot:J9PBI0
Length = 232
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 28/94 (29%), Positives = 46/94 (48%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDIFIDNYTRR 75
F+CS+CLE L + T CGH FC +CI + +K + CP L + + + +R
Sbjct: 35 FDCSVCLEVLHQPVRTRCGHVFCRSCIAT--SLKNNRWTCPYCRAYLPSEGVPATDVAKR 92
Query: 76 EILENNLTCPYKQCSSQLSIPEYESHVNTCYLKY 109
E C +C + + + E +H+ +C KY
Sbjct: 93 MKSEYQ-NCT--ECDTLVCLSEMRAHIRSCQ-KY 122
>ZFIN|ZDB-GENE-090511-2 [details] [associations]
symbol:btr01 "bloodthirsty-related gene family,
member 1" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-090511-2 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CU929294 IPI:IPI00773115
Ensembl:ENSDART00000073689 Bgee:F1QYX5 Uniprot:F1QYX5
Length = 565
Score = 136 (52.9 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDIFIDNY 72
+ +F CSICL+ + + T CGH FC++CI S+ + +GK +CP+ ++ K N+
Sbjct: 14 EEQFTCSICLDIFTNPVSTPCGHSFCSSCISSYWEGQGKTCFCPLCKESFRKRPELHVNH 73
Query: 73 TRREILE 79
T +EI E
Sbjct: 74 TLKEITE 80
Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 254 CSCKTCGDNSHLLKLVYERMVLLEQSMLEQKIKVNNFEL 292
C C C ++ H V E E ++ + ++++ EL
Sbjct: 191 CICAVCAESEHYGHTVTEAK--REMNIRKSQLRILEVEL 227
Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 351 RVNISREDAQYLSLFIHL---VQGENDDILDWPFVGRIRFTALNTSSEF-SITDEIQSDK 406
+VN RE A +S+F L V+ ++L+ +G+ R L + + + EI K
Sbjct: 249 QVNAEREKAGTISMFAELMKSVEKSQAELLEVVEMGQ-RAAELRSQAFIREVQTEISDLK 307
Query: 407 N 407
N
Sbjct: 308 N 308
>ZFIN|ZDB-GENE-040813-1 [details] [associations]
symbol:rnf114 "ring finger protein 114" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 Pfam:PF05605
ZFIN:ZDB-GENE-040813-1 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
EMBL:CR759920 EMBL:BC079515 EMBL:AY609381 IPI:IPI00508716
RefSeq:NP_001001828.2 UniGene:Dr.86280 Ensembl:ENSDART00000019667
GeneID:414843 KEGG:dre:414843 InParanoid:Q6J0N1 NextBio:20818739
Uniprot:Q6J0N1
Length = 221
Score = 124 (48.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/123 (30%), Positives = 55/123 (44%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGK--NYCPIDEKVLTKDDIFIDN 71
D F C +CLE + T CGH FC C+ + + C D + KDD + +
Sbjct: 17 DDDFVCPVCLEIFVRPMTTQCGHTFCNDCLQECLRPQSPVCAVCRTDLRKWAKDD-HLQD 75
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDIT-DSPT--SSFR 126
+R I + C K C +++ I + SH C Y Y Q ++ I+ D P+ SS
Sbjct: 76 LMKRSIGK----C--KGCKNEVLISDMRSHTGNCFKYQNYIQEGMKSISKDQPSIVSSVP 129
Query: 127 NTS 129
N S
Sbjct: 130 NRS 132
>UNIPROTKB|Q96A37 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 EMBL:CH471184 Gene3D:3.30.40.10 InterPro:IPR013083
PROSITE:PS50330 InterPro:IPR017907 InterPro:IPR008598
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:115992 eggNOG:NOG149065
OrthoDB:EOG4DJJX8 EMBL:AK057106 EMBL:AK057201 EMBL:BC013948
EMBL:BC017226 IPI:IPI00059215 IPI:IPI00647888 RefSeq:NP_001165286.1
RefSeq:NP_001165287.1 RefSeq:NP_849163.1 UniGene:Hs.513804
ProteinModelPortal:Q96A37 SMR:Q96A37 IntAct:Q96A37 STRING:Q96A37
PhosphoSite:Q96A37 DMDM:74762644 PRIDE:Q96A37 DNASU:115992
Ensembl:ENST00000312838 Ensembl:ENST00000537718
Ensembl:ENST00000541206 GeneID:115992 KEGG:hsa:115992
UCSC:uc002flk.3 GeneCards:GC16M088762 HGNC:HGNC:28856 HPA:HPA042970
neXtProt:NX_Q96A37 PharmGKB:PA134915234 InParanoid:Q96A37
OMA:LVKHCVD PhylomeDB:Q96A37 ChiTaRS:RNF166 GenomeRNAi:115992
NextBio:79721 ArrayExpress:Q96A37 Bgee:Q96A37 CleanEx:HS_RNF166
Genevestigator:Q96A37 GermOnline:ENSG00000158717 Uniprot:Q96A37
Length = 237
Score = 125 (49.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 7 ANNKLNLDPRFECSICLE-YLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKD 65
A L+ ++ C ICLE Y + + SCGH FC C+ + V CP+ L D
Sbjct: 21 AGGDSGLEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSP-LCPLCR--LPFD 77
Query: 66 DIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQ 111
+D T E ++ P + C+ ++++ + H+++C LK +
Sbjct: 78 PKKVDKATHVEKQLSSYKAPCRGCNKKVTLAKMRVHISSC-LKVQE 122
>UNIPROTKB|D6RAH9 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00966985
ProteinModelPortal:D6RAH9 SMR:D6RAH9 Ensembl:ENST00000510143
HOGENOM:HOG000207449 ArrayExpress:D6RAH9 Bgee:D6RAH9 Uniprot:D6RAH9
Length = 99
Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL 62
+D C ICL+ L D + T CGH +C C+ +++ V+ K++CP+D K L
Sbjct: 35 VDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFL-VE-KDFCPMDRKPL 82
>UNIPROTKB|D6RB76 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00967553
ProteinModelPortal:D6RB76 SMR:D6RB76 Ensembl:ENST00000512247
ArrayExpress:D6RB76 Bgee:D6RB76 Uniprot:D6RB76
Length = 90
Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL 62
+D C ICL+ L D + T CGH +C C+ +++ V+ K++CP+D K L
Sbjct: 35 VDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFL-VE-KDFCPMDRKPL 82
>UNIPROTKB|I3LNV6 [details] [associations]
symbol:I3LNV6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR027130 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 PANTHER:PTHR10131:SF23
EMBL:CU915362 Ensembl:ENSSSCT00000031230 Uniprot:I3LNV6
Length = 91
Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVL 62
L+ R+ C+ C L + T CGH+FC CI S ++ CP+D++V+
Sbjct: 39 LEERYRCAFCRSVLHNPHQTGCGHRFCQDCILSLRELNAVPLCPVDKEVI 88
>UNIPROTKB|F1NVY8 [details] [associations]
symbol:LNX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 GeneTree:ENSGT00650000092901
OMA:LQHCKKS EMBL:AADN02031302 IPI:IPI00811998
Ensembl:ENSGALT00000022592 Uniprot:F1NVY8
Length = 717
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+D C ICL+ L + T CGH FC AC+ +++ K++CP+D K++ + N
Sbjct: 33 VDDDLICHICLQPLLQPLDTLCGHTFCTACLTNFL--LEKDFCPMDRKLVA-----LQNC 85
Query: 73 TRREILENNL------TCPYKQ-CSSQLSIPEYESHVNT 104
+ IL NNL +CP+ + CS + E H T
Sbjct: 86 RKSSILVNNLLDKLMVSCPFTEHCSEVVQRGHLEQHFQT 124
>UNIPROTKB|Q9Y508 [details] [associations]
symbol:RNF114 "RING finger protein 114" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 Prosite:PS00518 Pfam:PF05605 GO:GO:0007275
EMBL:CH471077 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
HOGENOM:HOG000230946 HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR
OrthoDB:EOG4CVG7Q EMBL:AF265215 EMBL:BX640603 EMBL:BT006795
EMBL:AK315638 EMBL:AK301731 EMBL:AL031685 EMBL:BC013695
EMBL:BC066919 IPI:IPI00032955 IPI:IPI00908327 RefSeq:NP_061153.1
UniGene:Hs.144949 ProteinModelPortal:Q9Y508 SMR:Q9Y508
IntAct:Q9Y508 MINT:MINT-1419719 STRING:Q9Y508 PhosphoSite:Q9Y508
DMDM:20141070 PaxDb:Q9Y508 PeptideAtlas:Q9Y508 PRIDE:Q9Y508
DNASU:55905 Ensembl:ENST00000244061 GeneID:55905 KEGG:hsa:55905
UCSC:uc002xux.3 GeneCards:GC20P048552 HGNC:HGNC:13094 HPA:HPA021184
MIM:612451 neXtProt:NX_Q9Y508 PharmGKB:PA162401502
InParanoid:Q9Y508 PhylomeDB:Q9Y508 ChiTaRS:RNF114 GenomeRNAi:55905
NextBio:61283 ArrayExpress:Q9Y508 Bgee:Q9Y508 CleanEx:HS_RNF114
Genevestigator:Q9Y508 GermOnline:ENSG00000124226 Uniprot:Q9Y508
Length = 228
Score = 124 (48.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 38/144 (26%), Positives = 60/144 (41%)
Query: 14 DP--RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
DP RF C +CLE + + CGH FC+AC+ + K K C + L ++
Sbjct: 22 DPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPK-KPVCGVCRSALAPGVRAVE- 79
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGI 131
R+I +C C + + SHV TC KY +E + ++ ++ S
Sbjct: 80 -LERQIESTETSC--HGCRKNFFLSKIRSHVATCS-KYQNYIMEGVK----ATIKDASLQ 131
Query: 132 PTNKRNSKILTVTVFPE-HLNMQG 154
P N N PE + + +G
Sbjct: 132 PRNVPNRYTFPCPYCPEKNFDQEG 155
>MGI|MGI:1860076 [details] [associations]
symbol:Rnf5 "ring finger protein 5" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0070936 "protein K48-linked ubiquitination" evidence=ISO]
[GO:0071712 "ER-associated misfolded protein catabolic process"
evidence=ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 EMBL:AF030001 MGI:MGI:1860076 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 GO:GO:0071712
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 CTD:6048
OMA:FQSFGDT OrthoDB:EOG469QVX EMBL:BC016449 IPI:IPI00128461
PIR:T09063 RefSeq:NP_062276.1 UniGene:Mm.274542
ProteinModelPortal:O35445 SMR:O35445 MINT:MINT-1341225
STRING:O35445 PhosphoSite:O35445 PRIDE:O35445
Ensembl:ENSMUST00000015622 GeneID:54197 KEGG:mmu:54197
UCSC:uc008ccy.1 InParanoid:O35445 NextBio:311046 Bgee:O35445
CleanEx:MM_RNF5 Genevestigator:O35445 GermOnline:ENSMUSG00000015478
Uniprot:O35445
Length = 180
Score = 119 (46.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 16/52 (30%), Positives = 35/52 (67%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI 67
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ +
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKV 76
>RGD|1588458 [details] [associations]
symbol:Rnf5 "ring finger protein 5, E3 ubiquitin protein ligase"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0044257
"cellular protein catabolic process" evidence=ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0070936
"protein K48-linked ubiquitination" evidence=IEA;ISO] [GO:0071712
"ER-associated misfolded protein catabolic process"
evidence=IEA;ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 RGD:1588458 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 GO:GO:0071712
HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
GeneTree:ENSGT00390000014107 HOVERGEN:HBG054495 CTD:6048
OMA:FQSFGDT OrthoDB:EOG469QVX EMBL:BC088341 IPI:IPI00215379
RefSeq:NP_001102495.1 UniGene:Rn.136937 ProteinModelPortal:Q5M807
SMR:Q5M807 STRING:Q5M807 Ensembl:ENSRNOT00000000501 GeneID:407784
KEGG:rno:407784 UCSC:RGD:1588458 InParanoid:Q5M807 NextBio:696189
Genevestigator:Q5M807 GermOnline:ENSRNOG00000000438 Uniprot:Q5M807
Length = 180
Score = 119 (46.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 16/52 (30%), Positives = 35/52 (67%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDDI 67
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ +
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKV 76
>UNIPROTKB|E1BJY5 [details] [associations]
symbol:RNF125 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GeneTree:ENSGT00530000063064 CTD:54941 KO:K12170
OMA:RTRCGHV EMBL:DAAA02056451 IPI:IPI00717546 RefSeq:NP_001192788.1
UniGene:Bt.51849 ProteinModelPortal:E1BJY5
Ensembl:ENSBTAT00000004048 GeneID:519541 KEGG:bta:519541
NextBio:20872894 Uniprot:E1BJY5
Length = 232
Score = 124 (48.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRRE 76
F+CS+CLE L + T CGH FC +CI + + K CP L + + + +R
Sbjct: 35 FDCSVCLEVLHHPVRTRCGHVFCRSCIATSLK-NNKWTCPYCRAYLPSEGVPAADVAKRM 93
Query: 77 ILE-NNLTCPYKQCSSQLSIPEYESHVNTCYLKY 109
E N T +C + + + E +H TC KY
Sbjct: 94 KSEFRNCT----ECDTLVCLSEMRAHTRTCQ-KY 122
>DICTYBASE|DDB_G0285333 [details] [associations]
symbol:DDB_G0285333 "RING finger protein 185"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0285333 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000079 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:COG5574 KO:K10666
RefSeq:XP_638242.1 ProteinModelPortal:Q54ND8
EnsemblProtists:DDB0186444 GeneID:8625050 KEGG:ddi:DDB_G0285333
InParanoid:Q54ND8 OMA:CIFQWLQ Uniprot:Q54ND8
Length = 281
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
FEC+IC + + + ++T CGH FC CI W+ CP+ + +TK+ + I Y R
Sbjct: 71 FECNICFDDVSEPVVTQCGHLFCWTCIFQWLQHNSSQQCPVCKAPITKEKL-IPIYGR 127
>UNIPROTKB|B1AMY1 [details] [associations]
symbol:TRAF2 "TNF receptor-associated factor 2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0007250 "activation of
NF-kappaB-inducing kinase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0033209 "tumor necrosis
factor-mediated signaling pathway" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0005174 "CD40
receptor binding" evidence=IEA] [GO:0009898 "internal side of
plasma membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0035631 "CD40 receptor complex"
evidence=IEA] [GO:0043623 "cellular protein complex assembly"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0051023 "regulation of immunoglobulin secretion" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR027133
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005938 GO:GO:0046872 GO:GO:0008270 GO:GO:0045121
GO:GO:0030163 GO:GO:0051092 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL355987 GO:GO:0033209 GO:GO:0046328 GO:GO:0009898
InterPro:IPR017907 GO:GO:0043623 GO:GO:0035631 GO:GO:0051023
GO:GO:0034351 HOGENOM:HOG000231558 EMBL:AL449425 UniGene:Hs.522506
HGNC:HGNC:12032 PANTHER:PTHR10131:SF21 OrthoDB:EOG4R502J
IPI:IPI00644377 SMR:B1AMY1 Ensembl:ENST00000414589 Uniprot:B1AMY1
Length = 121
Score = 107 (42.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCP--IDE-------KVLT 63
L+ ++ CS C L+ CGH++C+ C+ S + G C + E +L
Sbjct: 28 LEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILS-SGPQNCAACVHEGIYEEGISILE 86
Query: 64 KDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEY 98
F DN RRE+ CP C+ + ++ EY
Sbjct: 87 SSSAFPDNAARREVESLPAVCPSDGCTWKGTLKEY 121
>UNIPROTKB|E2RBE8 [details] [associations]
symbol:LNX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00595 InterPro:IPR001841 InterPro:IPR001478
PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184 SMART:SM00228
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0051260 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156
GO:GO:0004842 InterPro:IPR017907 GO:GO:0042787
GeneTree:ENSGT00650000092901 CTD:84708 KO:K10692 OMA:LQHCKKS
EMBL:AAEX03009066 EMBL:AAEX03009067 EMBL:AAEX03009068
RefSeq:XP_849707.1 ProteinModelPortal:E2RBE8
Ensembl:ENSCAFT00000003234 GeneID:475143 KEGG:cfa:475143
NextBio:20851033 Uniprot:E2RBE8
Length = 732
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++D C ICL+ L D + T CGH +C C+ +++ V+ K++CP+D K++ +
Sbjct: 38 DVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFL-VE-KDFCPVDRKLVVLQHCKKSS 95
Query: 72 YTRREILENNL-TCPYKQ-CSSQLSIPEYESHVNT 104
++L + TCP+ + C+ + + E H T
Sbjct: 96 ILVNKLLNKLMVTCPFSEYCAEVVQRCDLEQHFQT 130
>TAIR|locus:2049023 [details] [associations]
symbol:AT2G23780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006661 "phosphatidylinositol biosynthetic
process" evidence=RCA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AC004482 HOGENOM:HOG000238304 KO:K10666 eggNOG:NOG300581
HSSP:P22681 EMBL:BT008560 EMBL:BT008701 EMBL:AK229514
IPI:IPI00539367 PIR:T02413 RefSeq:NP_179958.1 UniGene:At.12626
ProteinModelPortal:O64824 SMR:O64824 EnsemblPlants:AT2G23780.1
GeneID:816910 KEGG:ath:AT2G23780 TAIR:At2g23780 InParanoid:O64824
OMA:VNGESST PhylomeDB:O64824 ProtClustDB:CLSN2912869
ArrayExpress:O64824 Genevestigator:O64824 Uniprot:O64824
Length = 227
Score = 123 (48.4 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 32/92 (34%), Positives = 45/92 (48%)
Query: 7 ANNKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTK 64
+NN N FEC+IC E +D I+T CGH FC C+ W+ + CP+ K + +
Sbjct: 15 SNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQECPVC-KAVVQ 73
Query: 65 DDIFIDNYTRREILENNLTCPYKQCSSQLSIP 96
DD + Y R + N T P + L IP
Sbjct: 74 DDKLVPLYGRGK----NQTDPRSKRYPGLRIP 101
>UNIPROTKB|Q6J1I8 [details] [associations]
symbol:RNF114 "RING finger protein 114" species:9823 "Sus
scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 Pfam:PF05605
GO:GO:0007275 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 CTD:55905 HOVERGEN:HBG074331
KO:K15697 EMBL:AY606064 RefSeq:NP_001001869.1 UniGene:Ssc.32113
ProteinModelPortal:Q6J1I8 GeneID:414917 KEGG:ssc:414917
Uniprot:Q6J1I8
Length = 228
Score = 123 (48.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/118 (27%), Positives = 49/118 (41%)
Query: 14 DP--RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
DP RF C +CLE + + CGH FC+AC+ + K K C + L ++
Sbjct: 22 DPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPK-KPVCGVCRSTLAPGVRAVE- 79
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDITDSPTSSFRN 127
R+I +C C + + +HV TC Y Y V+ T + RN
Sbjct: 80 -LERQIESTETSC--HGCRKNFFLSKIRAHVATCSKYQNYIMEGVKATTKDASLQPRN 134
>UNIPROTKB|F1P646 [details] [associations]
symbol:TRIM39 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
OMA:KESNRCE EMBL:AAEX03008197 ProteinModelPortal:F1P646
Ensembl:ENSCAFT00000000617 Uniprot:F1P646
Length = 488
Score = 134 (52.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
Score = 38 (18.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV-LDP 438
I+ +KNF +F R +F +K I ADV LDP
Sbjct: 282 IELEKNFSNFPR--QYFALRKIL--KQLI--ADVTLDP 313
>UNIPROTKB|F5H297 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AL662832
EMBL:AL662795 EMBL:AL773535 EMBL:BX294158 EMBL:CR759928
EMBL:BX927214 EMBL:CR759281 EMBL:BX248580 HGNC:HGNC:10065
IPI:IPI01011847 SMR:F5H297 Ensembl:ENST00000540416
Ensembl:ENST00000546886 Ensembl:ENST00000547272
Ensembl:ENST00000547462 Ensembl:ENST00000547598
Ensembl:ENST00000552594 Ensembl:ENST00000552805 Uniprot:F5H297
Length = 488
Score = 134 (52.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
Score = 38 (18.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV-LDP 438
I+ +KNF +F R +F +K I ADV LDP
Sbjct: 282 IELEKNFSNFPR--QYFALRKIL--KQLI--ADVTLDP 313
>UNIPROTKB|I7FTT9 [details] [associations]
symbol:TRIM39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 CTD:56658 KO:K12015 OMA:KESNRCE
EMBL:CU498826 EMBL:AB158488 RefSeq:NP_001121951.1 UniGene:Ssc.96738
ProteinModelPortal:I7FTT9 Ensembl:ENSSSCT00000001458
Ensembl:ENSSSCT00000035503 Ensembl:ENSSSCT00000035776
GeneID:100151742 KEGG:ssc:100151742 Uniprot:I7FTT9
Length = 488
Score = 134 (52.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
Score = 38 (18.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV-LDP 438
I+ +KNF +F R +F +K I ADV LDP
Sbjct: 282 IELEKNFSNFPR--QYFALRKIL--KQLI--ADVTLDP 313
>MGI|MGI:1890659 [details] [associations]
symbol:Trim39 "tripartite motif-containing 39" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
MGI:MGI:1890659 Pfam:PF00097 Prosite:PS00518 GO:GO:0005829
GO:GO:0005739 GO:GO:0006915 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOVERGEN:HBG001357 HOGENOM:HOG000234134 CTD:56658 eggNOG:NOG238084
KO:K12015 EMBL:AB046382 EMBL:AK053507 EMBL:BC031540 IPI:IPI00308801
IPI:IPI00480364 IPI:IPI00480438 RefSeq:NP_077788.2 UniGene:Mm.40624
ProteinModelPortal:Q9ESN2 SMR:Q9ESN2 STRING:Q9ESN2
PhosphoSite:Q9ESN2 PRIDE:Q9ESN2 GeneID:79263 KEGG:mmu:79263
UCSC:uc008ckv.1 InParanoid:Q9ESN2 OrthoDB:EOG480HWD NextBio:349899
CleanEx:MM_TRIM39 Genevestigator:Q9ESN2
GermOnline:ENSMUSG00000045409 Uniprot:Q9ESN2
Length = 488
Score = 134 (52.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
Score = 38 (18.4 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV-LDP 438
I+ +KNF +F R +F +K I ADV LDP
Sbjct: 282 IELEKNFSNFPR--QYFALRKIL--KQLI--ADVTLDP 313
>UNIPROTKB|E2QS10 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 KO:K10666 GeneTree:ENSGT00390000014107
CTD:6048 OMA:FQSFGDT EMBL:AAEX03008226 RefSeq:XP_532092.1
Ensembl:ENSCAFT00000001208 GeneID:474858 KEGG:cfa:474858
NextBio:20850802 Uniprot:E2QS10
Length = 180
Score = 118 (46.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 16/52 (30%), Positives = 35/52 (67%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDI 67
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ +
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKV 76
>UNIPROTKB|Q99942 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IDA] [GO:0044257 "cellular
protein catabolic process" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IMP] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005789 GO:GO:0031966 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070936 GO:GO:0070534 EMBL:AL662884
GO:GO:0071712 EMBL:U89336 EMBL:AL845464 EMBL:BX284686 EMBL:BX927239
EMBL:CR933878 EMBL:CR812478 EMBL:AL662830 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 HOVERGEN:HBG054495 EMBL:AB056869
EMBL:AJ243936 EMBL:AK311859 EMBL:BT007105 EMBL:BC004155
EMBL:BC111392 EMBL:BC119741 EMBL:BC119742 EMBL:BC127651
EMBL:BC127652 EMBL:BC148255 IPI:IPI00012608 RefSeq:NP_008844.1
UniGene:Hs.731774 ProteinModelPortal:Q99942 SMR:Q99942
DIP:DIP-29268N IntAct:Q99942 MINT:MINT-1032027 STRING:Q99942
PhosphoSite:Q99942 DMDM:74762702 PRIDE:Q99942 DNASU:6048
Ensembl:ENST00000375094 Ensembl:ENST00000413786
Ensembl:ENST00000432616 Ensembl:ENST00000445885
Ensembl:ENST00000449794 Ensembl:ENST00000453473
Ensembl:ENST00000456167 GeneID:6048 KEGG:hsa:6048 UCSC:uc003oaj.4
CTD:6048 GeneCards:GC06P032146 H-InvDB:HIX0034363 HGNC:HGNC:10068
HPA:CAB034107 MIM:602677 neXtProt:NX_Q99942 PharmGKB:PA34442
InParanoid:Q99942 OMA:FQSFGDT OrthoDB:EOG469QVX GenomeRNAi:6048
NextBio:23565 ArrayExpress:Q99942 Bgee:Q99942 CleanEx:HS_RNF5
Genevestigator:Q99942 GermOnline:ENSG00000204308 Uniprot:Q99942
Length = 180
Score = 118 (46.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 16/52 (30%), Positives = 35/52 (67%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDI 67
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ +
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKV 76
>UNIPROTKB|A5A8Y3 [details] [associations]
symbol:RNF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071712 "ER-associated misfolded protein catabolic
process" evidence=IEA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 GO:GO:0070936
GO:GO:0070534 GO:GO:0071712 EMBL:AL773562 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 GeneTree:ENSGT00390000014107
HOVERGEN:HBG054495 CTD:6048 OMA:FQSFGDT OrthoDB:EOG469QVX
EMBL:CT954269 RefSeq:NP_001116696.1 UniGene:Ssc.1246
ProteinModelPortal:A5A8Y3 Ensembl:ENSSSCT00000001585
GeneID:100144528 KEGG:ssc:100144528 Uniprot:A5A8Y3
Length = 180
Score = 118 (46.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 16/52 (30%), Positives = 35/52 (67%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDI 67
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ +
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKV 76
>UNIPROTKB|F8W8H7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930098 ProteinModelPortal:F8W8H7 SMR:F8W8H7
PRIDE:F8W8H7 Ensembl:ENST00000354071 ArrayExpress:F8W8H7
Bgee:F8W8H7 Uniprot:F8W8H7
Length = 1598
Score = 135 (52.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 77/298 (25%), Positives = 127/298 (42%)
Query: 9 NKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDD 66
N +N + EC ICLE +K+ + T C H FC C+ ++ K G + CP+ + +TK
Sbjct: 13 NVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
Query: 67 IFIDNYTR-REILENNLTCPYKQCSSQLSIP-EYESHVNTCYLKYSQPSVEDITDSPTSS 124
+ TR +++E L C+ QL EY + N + K S E + D S
Sbjct: 73 L--QESTRFSQLVEELLKII---CAFQLDTGLEYANSYN--FAKKENNSPEHLKDEV--S 123
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
+ G R ++L PE+ ++Q +S + +G +++ ++
Sbjct: 124 IIQSMGY--RNRAKRLLQSE--PENPSLQETS---LSVQLSNLGTVRTLRTKQRIQPQ-- 174
Query: 185 LKTSFHLEL-------LFNK--YCSDGSQSTN--TPSHGRQDTS--NQKEI-----EAYL 226
KTS ++EL NK YCS G Q TP R + S + K+ E +
Sbjct: 175 -KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDV 233
Query: 227 MKNKEHESKLWDPN--KNQAGD---DK---SSEGDCSCKTCGDNSHLLKLVYERMVLL 276
+ H+ D N + +A + +K SS + + CG N+H L +E LL
Sbjct: 234 TNTEHHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLL 291
>UNIPROTKB|E7EMP0 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 InterPro:IPR025994
Pfam:PF12820 EMBL:AC060780 EMBL:AC135721 HGNC:HGNC:1100
ChiTaRS:BRCA1 IPI:IPI00930496 ProteinModelPortal:E7EMP0 SMR:E7EMP0
PRIDE:E7EMP0 Ensembl:ENST00000346315 ArrayExpress:E7EMP0
Bgee:E7EMP0 Uniprot:E7EMP0
Length = 1624
Score = 135 (52.6 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 77/298 (25%), Positives = 127/298 (42%)
Query: 9 NKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDD 66
N +N + EC ICLE +K+ + T C H FC C+ ++ K G + CP+ + +TK
Sbjct: 13 NVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
Query: 67 IFIDNYTR-REILENNLTCPYKQCSSQLSIP-EYESHVNTCYLKYSQPSVEDITDSPTSS 124
+ TR +++E L C+ QL EY + N + K S E + D S
Sbjct: 73 L--QESTRFSQLVEELLKII---CAFQLDTGLEYANSYN--FAKKENNSPEHLKDEV--S 123
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
+ G R ++L PE+ ++Q +S + +G +++ ++
Sbjct: 124 IIQSMGY--RNRAKRLLQSE--PENPSLQETS---LSVQLSNLGTVRTLRTKQRIQPQ-- 174
Query: 185 LKTSFHLEL-------LFNK--YCSDGSQSTN--TPSHGRQDTS--NQKEI-----EAYL 226
KTS ++EL NK YCS G Q TP R + S + K+ E +
Sbjct: 175 -KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDV 233
Query: 227 MKNKEHESKLWDPN--KNQAGD---DK---SSEGDCSCKTCGDNSHLLKLVYERMVLL 276
+ H+ D N + +A + +K SS + + CG N+H L +E LL
Sbjct: 234 TNTEHHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLL 291
>UNIPROTKB|E7EM95 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662884 EMBL:AL845464 EMBL:BX284686
EMBL:BX927239 EMBL:CR933878 EMBL:CR812478 EMBL:AL662830
HGNC:HGNC:10068 IPI:IPI00910392 SMR:E7EM95 Ensembl:ENST00000427134
Ensembl:ENST00000547812 Ensembl:ENST00000548239
Ensembl:ENST00000549150 Ensembl:ENST00000549680
Ensembl:ENST00000549803 Ensembl:ENST00000550243 Uniprot:E7EM95
Length = 182
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 16/52 (30%), Positives = 35/52 (67%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVLTKDDI 67
FEC+ICLE ++A+++ CGH +C C+ W++ + + CP+ + ++++ +
Sbjct: 25 FECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKV 76
>UNIPROTKB|F5H899 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AL662832
EMBL:AL773535 EMBL:BX294158 EMBL:CR759928 EMBL:BX927214
EMBL:CR759281 EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI01009635
SMR:F5H899 Ensembl:ENST00000546867 Ensembl:ENST00000548680
Ensembl:ENST00000549959 Ensembl:ENST00000550063
Ensembl:ENST00000550432 Ensembl:ENST00000552047 Uniprot:F5H899
Length = 518
Score = 134 (52.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
Score = 38 (18.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV-LDP 438
I+ +KNF +F R +F +K I ADV LDP
Sbjct: 312 IELEKNFSNFPR--QYFALRKIL--KQLI--ADVTLDP 343
>UNIPROTKB|Q9HCM9 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0005829 GO:GO:0005739 GO:GO:0006915
EMBL:CH471081 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL662795
EMBL:AL773535 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:AB046381 EMBL:BT007370 EMBL:AB110937 EMBL:AK292512
EMBL:AB110938 EMBL:AB202089 EMBL:BX248580 EMBL:BC007661
EMBL:BC034985 IPI:IPI00293604 IPI:IPI00873841 PIR:JC7387
RefSeq:NP_067076.2 RefSeq:NP_742013.1 UniGene:Hs.413493 PDB:2DID
PDB:2DIF PDB:2ECJ PDBsum:2DID PDBsum:2DIF PDBsum:2ECJ
ProteinModelPortal:Q9HCM9 SMR:Q9HCM9 IntAct:Q9HCM9
MINT:MINT-1433641 STRING:Q9HCM9 PhosphoSite:Q9HCM9 DMDM:56405385
PRIDE:Q9HCM9 DNASU:56658 Ensembl:ENST00000376656
Ensembl:ENST00000376659 Ensembl:ENST00000383601
Ensembl:ENST00000383602 Ensembl:ENST00000383603
Ensembl:ENST00000396547 Ensembl:ENST00000396548
Ensembl:ENST00000396551 Ensembl:ENST00000400644
Ensembl:ENST00000413715 Ensembl:ENST00000414015
Ensembl:ENST00000419790 Ensembl:ENST00000424575
Ensembl:ENST00000426469 Ensembl:ENST00000430502
Ensembl:ENST00000431272 Ensembl:ENST00000433900
Ensembl:ENST00000438076 Ensembl:ENST00000438859
Ensembl:ENST00000440117 Ensembl:ENST00000443109
Ensembl:ENST00000445206 Ensembl:ENST00000446397
Ensembl:ENST00000449318 Ensembl:ENST00000450778
Ensembl:ENST00000451132 Ensembl:ENST00000451715
Ensembl:ENST00000452705 Ensembl:ENST00000458607
Ensembl:ENST00000547030 Ensembl:ENST00000548002
Ensembl:ENST00000549841 Ensembl:ENST00000550282
Ensembl:ENST00000552337 Ensembl:ENST00000552520 GeneID:56658
KEGG:hsa:56658 UCSC:uc003npz.3 UCSC:uc010jrz.3 CTD:56658
GeneCards:GC06P030294 HGNC:HGNC:10065 MIM:605700 neXtProt:NX_Q9HCM9
PharmGKB:PA35535 eggNOG:NOG238084 InParanoid:Q9HCM9 KO:K12015
OMA:KESNRCE EvolutionaryTrace:Q9HCM9 GenomeRNAi:56658 NextBio:62129
ArrayExpress:Q9HCM9 Bgee:Q9HCM9 CleanEx:HS_TRIM39
Genevestigator:Q9HCM9 GermOnline:ENSG00000204599 Uniprot:Q9HCM9
Length = 518
Score = 134 (52.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEK 60
NL CS+CLEYLK+ ++ CGH FC ACI W + +++ CP+ K
Sbjct: 22 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRK 71
Score = 38 (18.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 402 IQSDKNFDSFKRPVNFFLNKKAFGFNNFIRVADV-LDP 438
I+ +KNF +F R +F +K I ADV LDP
Sbjct: 312 IELEKNFSNFPR--QYFALRKIL--KQLI--ADVTLDP 343
>UNIPROTKB|Q5F3B2 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR003903 PROSITE:PS50330 InterPro:IPR017907
InterPro:IPR008598 HOGENOM:HOG000230946 HOVERGEN:HBG074331
EMBL:AJ851738 IPI:IPI00589511 RefSeq:NP_001012953.1
UniGene:Gga.8507 ProteinModelPortal:Q5F3B2 GeneID:425360
KEGG:gga:425360 CTD:115992 eggNOG:NOG149065 InParanoid:Q5F3B2
OrthoDB:EOG4DJJX8 NextBio:20827453 ArrayExpress:Q5F3B2
Uniprot:Q5F3B2
Length = 244
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 26/94 (27%), Positives = 47/94 (50%)
Query: 13 LDPRFECSICLEYLKDAI-LTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L+ +F C ICLE A+ + CGH FC C+ + V CP+ + D ++
Sbjct: 34 LEAQFSCPICLEVFHRAVGIAGCGHTFCGECLQPCLQVPSP-LCPLCR--MPFDPKKVEK 90
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
+ E ++ P + CS ++++ + SHV++C
Sbjct: 91 ASSVEKQLSSYKAPCRGCSKKVTLAKMRSHVSSC 124
>ZFIN|ZDB-GENE-081031-50 [details] [associations]
symbol:btr19 "bloodthirsty-related gene family,
member 19" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081031-50
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00670000097622
EMBL:CT030005 Ensembl:ENSDART00000146448 Uniprot:I3IRW2
Length = 192
Score = 119 (46.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 9 NKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLT-KDD 66
+++ L +CSICLE D + T CGH FC +C+++ W + + CP ++ T + D
Sbjct: 6 SRVPLSEDLQCSICLEVFTDPVSTPCGHNFCKSCLNTCWNKTQTCS-CPNCKETFTQRPD 64
Query: 67 IFIDNYTRREILEN 80
+ I N T REI E+
Sbjct: 65 LKI-NTTLREISEH 77
>UNIPROTKB|F1SE62 [details] [associations]
symbol:LNX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00595
InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 GeneTree:ENSGT00650000092901
OMA:LQHCKKS EMBL:CU929026 EMBL:FP015933 EMBL:FP476000
Ensembl:ENSSSCT00000009675 Uniprot:F1SE62
Length = 737
Score = 131 (51.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+D C ICL+ L D + T CGH +C C+ +++ V+ K++CP+D K + +
Sbjct: 39 VDDDLICHICLQALLDPLDTPCGHTYCTVCLTNFL-VE-KDFCPVDRKPVVLQHCKKSSI 96
Query: 73 TRREILENNL-TCPYKQ-CSSQLSIPEYESHVNT 104
++L L TCP+ + C L + E H T
Sbjct: 97 LVNKLLNKLLVTCPFTEHCEEVLQRCDLEHHFQT 130
Score = 45 (20.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 105 CYLKYSQPSVEDITDSPTSS 124
CYLK ++ S E IT P+ S
Sbjct: 152 CYLKCARMSEEAITSLPSVS 171
>UNIPROTKB|A6NK02 [details] [associations]
symbol:TRIM75 "Putative tripartite motif-containing protein
75" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG001357
OrthoDB:EOG4NP73C EMBL:AC108465 IPI:IPI00398090
ProteinModelPortal:A6NK02 SMR:A6NK02 PaxDb:A6NK02 PRIDE:A6NK02
GeneCards:GC04P165980 HGNC:HGNC:32686 neXtProt:NX_A6NK02
eggNOG:NOG254111 InParanoid:A6NK02 NextBio:104801 CleanEx:HS_TRIM75
Genevestigator:A6NK02 Uniprot:A6NK02
Length = 468
Score = 128 (50.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACID-SWIDVKGKNYCPI 57
VA L +CSICL+YL D + CGH FC +CI SW+D++ CP+
Sbjct: 3 VAAALTGLQAEAKCSICLDYLSDPVTIECGHNFCRSCIQQSWLDLQELFPCPV 55
>UNIPROTKB|P38398 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006633 "fatty acid biosynthetic process"
evidence=IEA] [GO:0046600 "negative regulation of centriole
replication" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0015631 "tubulin binding" evidence=NAS]
[GO:0008274 "gamma-tubulin ring complex" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=NAS;TAS] [GO:0006978 "DNA
damage response, signal transduction by p53 class mediator
resulting in transcription of p21 class mediator" evidence=TAS]
[GO:0006359 "regulation of transcription from RNA polymerase III
promoter" evidence=TAS] [GO:0042127 "regulation of cell
proliferation" evidence=TAS] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0050681 "androgen receptor binding"
evidence=NAS] [GO:0000151 "ubiquitin ligase complex" evidence=NAS]
[GO:0031436 "BRCA1-BARD1 complex" evidence=IDA] [GO:0045739
"positive regulation of DNA repair" evidence=IMP] [GO:0031572 "G2
DNA damage checkpoint" evidence=IMP] [GO:0010212 "response to
ionizing radiation" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=IMP;TAS] [GO:0070531 "BRCA1-A complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IDA] [GO:0045717 "negative regulation of
fatty acid biosynthetic process" evidence=IMP] [GO:0030521
"androgen receptor signaling pathway" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0071681
"cellular response to indole-3-methanol" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006974 "response to DNA damage stimulus" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IDA;TAS] [GO:0006301 "postreplication
repair" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0031941 "filamentous actin"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0001726 "ruffle" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] [GO:2000145 "regulation of cell motility"
evidence=IDA] [GO:0071158 "positive regulation of cell cycle
arrest" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0035066 "positive regulation of
histone acetylation" evidence=IDA] [GO:0051571 "positive regulation
of histone H3-K4 methylation" evidence=IDA] [GO:0051573 "negative
regulation of histone H3-K9 methylation" evidence=IDA] [GO:0070512
"positive regulation of histone H4-K20 methylation" evidence=IDA]
[GO:2000617 "positive regulation of histone H3-K9 acetylation"
evidence=IDA] [GO:2000620 "positive regulation of histone H4-K16
acetylation" evidence=IDA] Reactome:REACT_216 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR011364 PIRSF:PIRSF001734
PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR001357 Pfam:PF00097 Pfam:PF00533 Prosite:PS00518
GO:GO:0005886 GO:GO:0045892 GO:GO:0005694 Reactome:REACT_115566
GO:GO:0008630 GO:GO:0007059 GO:GO:0005654 GO:GO:0030521
GO:GO:0071158 Pathway_Interaction_DB:aurora_a_pathway Orphanet:1331
GO:GO:0046872 GO:GO:0008270 Pathway_Interaction_DB:hnf3apathway
GO:GO:0045944 GO:GO:0006633 GO:GO:0003723 GO:GO:0010212
GO:GO:0042127 GO:GO:0044212 GO:GO:0007049 GO:GO:2000145
GO:GO:0003713 PDB:3COJ PDBsum:3COJ GO:GO:0045717
Reactome:REACT_111183 GO:GO:0030529 GO:GO:0001726 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000724 GO:GO:0031398
GO:GO:0004842 GO:GO:0034446 MIM:114480
Pathway_Interaction_DB:ar_pathway GO:GO:0015631 GO:GO:0050681
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 GO:GO:0045739
InterPro:IPR017907 GO:GO:0051865
Pathway_Interaction_DB:bard1pathway GO:GO:0031572 GO:GO:0070531
GO:GO:0031436 PDB:1JM7 PDBsum:1JM7 Orphanet:145 GO:GO:0085020
GO:GO:0006301 eggNOG:NOG274496 PANTHER:PTHR13763 CTD:672
HOGENOM:HOG000230969 HOVERGEN:HBG050730 KO:K10605 OrthoDB:EOG42RD7C
InterPro:IPR025994 Pfam:PF12820 EMBL:U14680 EMBL:L78833 EMBL:U64805
EMBL:AF005068 EMBL:DQ190450 EMBL:DQ190451 EMBL:DQ190452
EMBL:DQ190453 EMBL:DQ190454 EMBL:DQ190455 EMBL:DQ190456
EMBL:AY273801 EMBL:AC060780 EMBL:AC135721 EMBL:BC072418
IPI:IPI00027272 IPI:IPI00027277 IPI:IPI00185298 IPI:IPI00218982
IPI:IPI00909467 IPI:IPI00945705 PIR:A58881 RefSeq:NP_009225.1
RefSeq:NP_009228.2 RefSeq:NP_009229.2 RefSeq:NP_009230.2
RefSeq:NP_009231.2 UniGene:Hs.194143 PDB:1JNX PDB:1N5O PDB:1OQA
PDB:1T15 PDB:1T29 PDB:1T2U PDB:1T2V PDB:1Y98 PDB:2ING PDB:3K0H
PDB:3K0K PDB:3K15 PDB:3K16 PDB:3PXA PDB:3PXB PDB:3PXC PDB:3PXD
PDB:3PXE PDBsum:1JNX PDBsum:1N5O PDBsum:1OQA PDBsum:1T15
PDBsum:1T29 PDBsum:1T2U PDBsum:1T2V PDBsum:1Y98 PDBsum:2ING
PDBsum:3K0H PDBsum:3K0K PDBsum:3K15 PDBsum:3K16 PDBsum:3PXA
PDBsum:3PXB PDBsum:3PXC PDBsum:3PXD PDBsum:3PXE DisProt:DP00238
ProteinModelPortal:P38398 SMR:P38398 DIP:DIP-5971N IntAct:P38398
MINT:MINT-90433 STRING:P38398 PhosphoSite:P38398 DMDM:728984
PaxDb:P38398 PRIDE:P38398 DNASU:672 Ensembl:ENST00000352993
Ensembl:ENST00000357654 Ensembl:ENST00000468300 GeneID:672
KEGG:hsa:672 UCSC:uc002icp.4 UCSC:uc002icq.3 UCSC:uc010whl.2
GeneCards:GC17M041197 HGNC:HGNC:1100 HPA:CAB001946 HPA:CAB018369
HPA:HPA034966 MIM:113705 MIM:167000 MIM:604370 MIM:614320
neXtProt:NX_P38398 Orphanet:1333 Orphanet:168829 PharmGKB:PA25411
InParanoid:P38398 BindingDB:P38398 ChEMBL:CHEMBL5990 ChiTaRS:BRCA1
EvolutionaryTrace:P38398 GenomeRNAi:672 NextBio:2752
PMAP-CutDB:P38398 ArrayExpress:P38398 Bgee:P38398 CleanEx:HS_BRCA1
Genevestigator:P38398 GermOnline:ENSG00000012048 GO:GO:0008274
GO:GO:0071681 GO:GO:0006978 GO:GO:0046600 GO:GO:0051573
GO:GO:0051571 GO:GO:2000617 GO:GO:2000620 GO:GO:0070512
GO:GO:0006359 Uniprot:P38398
Length = 1863
Score = 135 (52.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 77/298 (25%), Positives = 127/298 (42%)
Query: 9 NKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDD 66
N +N + EC ICLE +K+ + T C H FC C+ ++ K G + CP+ + +TK
Sbjct: 13 NVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
Query: 67 IFIDNYTR-REILENNLTCPYKQCSSQLSIP-EYESHVNTCYLKYSQPSVEDITDSPTSS 124
+ TR +++E L C+ QL EY + N + K S E + D S
Sbjct: 73 L--QESTRFSQLVEELLKII---CAFQLDTGLEYANSYN--FAKKENNSPEHLKDEV--S 123
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
+ G R ++L PE+ ++Q +S + +G +++ ++
Sbjct: 124 IIQSMGY--RNRAKRLLQSE--PENPSLQETS---LSVQLSNLGTVRTLRTKQRIQPQ-- 174
Query: 185 LKTSFHLEL-------LFNK--YCSDGSQSTN--TPSHGRQDTS--NQKEI-----EAYL 226
KTS ++EL NK YCS G Q TP R + S + K+ E +
Sbjct: 175 -KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDV 233
Query: 227 MKNKEHESKLWDPN--KNQAGD---DK---SSEGDCSCKTCGDNSHLLKLVYERMVLL 276
+ H+ D N + +A + +K SS + + CG N+H L +E LL
Sbjct: 234 TNTEHHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLL 291
>UNIPROTKB|E9PFC7 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PRINTS:PR00493 PROSITE:PS50089 SMART:SM00184
InterPro:IPR001357 Pfam:PF00533 Prosite:PS00518 GO:GO:0007420
GO:GO:0032355 GO:GO:0005759 GO:GO:0046872 GO:GO:0003684
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0007584
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000794 SMART:SM00292
SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
PANTHER:PTHR13763 InterPro:IPR025994 Pfam:PF12820 EMBL:AC060780
EMBL:AC135721 IPI:IPI00945705 RefSeq:NP_009231.2 GeneID:672
HGNC:HGNC:1100 ChiTaRS:BRCA1 OMA:CMLKLLN GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 ProteinModelPortal:E9PFC7 SMR:E9PFC7
Ensembl:ENST00000471181 UCSC:uc002ict.3 ArrayExpress:E9PFC7
Bgee:E9PFC7 Uniprot:E9PFC7
Length = 1884
Score = 135 (52.6 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 77/298 (25%), Positives = 127/298 (42%)
Query: 9 NKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDD 66
N +N + EC ICLE +K+ + T C H FC C+ ++ K G + CP+ + +TK
Sbjct: 13 NVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
Query: 67 IFIDNYTR-REILENNLTCPYKQCSSQLSIP-EYESHVNTCYLKYSQPSVEDITDSPTSS 124
+ TR +++E L C+ QL EY + N + K S E + D S
Sbjct: 73 L--QESTRFSQLVEELLKII---CAFQLDTGLEYANSYN--FAKKENNSPEHLKDEV--S 123
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
+ G R ++L PE+ ++Q +S + +G +++ ++
Sbjct: 124 IIQSMGY--RNRAKRLLQSE--PENPSLQETS---LSVQLSNLGTVRTLRTKQRIQPQ-- 174
Query: 185 LKTSFHLEL-------LFNK--YCSDGSQSTN--TPSHGRQDTS--NQKEI-----EAYL 226
KTS ++EL NK YCS G Q TP R + S + K+ E +
Sbjct: 175 -KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDV 233
Query: 227 MKNKEHESKLWDPN--KNQAGD---DK---SSEGDCSCKTCGDNSHLLKLVYERMVLL 276
+ H+ D N + +A + +K SS + + CG N+H L +E LL
Sbjct: 234 TNTEHHQPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLL 291
>UNIPROTKB|F1PHC6 [details] [associations]
symbol:RNF166 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 GeneTree:ENSGT00530000063064
CTD:115992 EMBL:AAEX03003968 EMBL:AAEX03003969 RefSeq:XP_851172.1
ProteinModelPortal:F1PHC6 Ensembl:ENSCAFT00000031628 GeneID:608926
KEGG:cfa:608926 Uniprot:F1PHC6
Length = 237
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.4e-05
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 2 EHQPV---ANNKLNLDPRFECSICLE-YLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI 57
+ QP A L+ ++ C ICLE Y + + SCGH FC C+ + V CP+
Sbjct: 13 QRQPAGGPAGGDSGLEAQYSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSP-LCPL 71
Query: 58 DEKVLTKDDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
L D +D E ++ P + C+ ++++ + HV++C
Sbjct: 72 CR--LPFDPKKVDKAAHVEKQLSSYKAPCRGCNKKVTLAKMRVHVSSC 117
>WB|WBGene00006612 [details] [associations]
symbol:trf-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 InterPro:IPR012227
InterPro:IPR013323 Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
GO:GO:0007165 GO:GO:0042981 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 SUPFAM:SSF49599
EMBL:Z93382 Gene3D:3.90.890.10 HSSP:Q12933
GeneTree:ENSGT00550000074359 KO:K09848 EMBL:AF348168 PIR:T22238
RefSeq:NP_499773.2 UniGene:Cel.9956 ProteinModelPortal:G5EG80
SMR:G5EG80 EnsemblMetazoa:F45G2.6 GeneID:176767
KEGG:cel:CELE_F45G2.6 CTD:176767 WormBase:F45G2.6 OMA:RTNEAKS
NextBio:893922 Uniprot:G5EG80
Length = 462
Score = 88 (36.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 39/147 (26%), Positives = 65/147 (44%)
Query: 315 WKMYNFPAKLKEMKE-INRYFYSACFYSSCFGYRF--CTRVNISREDA-QYLSLFIHLVQ 370
WK+ + E K + +S F S FGY+ C + A + +SL++ L++
Sbjct: 267 WKIDKLQQRTNEAKSGADTTIFSVPFMSHRFGYKMMACACLFGDGSSAGKSISLYVLLLK 326
Query: 371 GENDDILDWPFVGRIRFTALNTS----SEFSITDEIQSDK---NFDSFKRPVNFFLNKKA 423
GE D L+WPF I+ + L+ + +IT I K N RP A
Sbjct: 327 GEFDPTLEWPFHRAIKISLLDQNPRPEDRVNITYVIDPRKLKANEKFLARPRGE--RNAA 384
Query: 424 FGFNNFIRVADVLDPGRGFLMEDDTFV 450
FG +F +A +L + ++ +D +V
Sbjct: 385 FGSQSFCSLA-IL---QNYVKDDKIYV 407
Score = 85 (35.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREIL 78
C IC + L+D I +C H +C C ++ G C + ++ + D +++IL
Sbjct: 18 CPICEQALRDPIKLNCDHHYCRQCFENENRTPG---CAACQTIIQPELCQHDRAKQKQIL 74
Query: 79 ENNLTCPYKQ--CSSQLSIPEYESHVNTCYLKYS 110
+ C ++ C + H++ C K S
Sbjct: 75 ALPVVCTFESSGCPWDGQLGTLHDHLSECTFKSS 108
>ZFIN|ZDB-GENE-040426-745 [details] [associations]
symbol:rad18 "RAD18 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003034 InterPro:IPR006642 Pfam:PF02037 PROSITE:PS50089
PROSITE:PS50800 SMART:SM00184 SMART:SM00513 SMART:SM00734
Prosite:PS00518 ZFIN:ZDB-GENE-040426-745 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P28990 eggNOG:COG5432
KO:K10627 CTD:56852 HOGENOM:HOG000234845 HOVERGEN:HBG054721
OrthoDB:EOG4RFKTF EMBL:BC044430 IPI:IPI00608781 RefSeq:NP_956431.1
UniGene:Dr.81359 ProteinModelPortal:Q803L3 STRING:Q803L3
GeneID:393106 KEGG:dre:393106 InParanoid:Q803L3 NextBio:20814179
ArrayExpress:Q803L3 Uniprot:Q803L3
Length = 426
Score = 127 (49.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+D C IC E+L +++T C H FC+ CI ++ K CP+ T+ D+ +N
Sbjct: 19 MDTLLRCPICFEFLNISMMTQCSHNFCSLCIRKFLSYK--LLCPVCNSPSTEQDLR-NNR 75
Query: 73 TRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLK 108
+++++ T K C S L P T +K
Sbjct: 76 LLDDLVQSFQTARQKLCHSNLESPPISPETPTMVIK 111
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 109 (43.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACI----DSWIDVKGKNYCPIDEKVLTKDDIFIDNYTR 74
C ICLE LK+ + T C H FC ACI +S + +G+ CP+ +F +
Sbjct: 15 CPICLELLKEPVSTDCNHSFCRACITINYESNRNTEGEGSCPVCRVCY----LFRNLRPN 70
Query: 75 REILENNLTCPYKQCSSQLSIPEYESHVNTC 105
R + N+ ++ SIPE E VN C
Sbjct: 71 RHVA--NIV---ERLKGFKSIPEEEQKVNVC 96
>UNIPROTKB|Q495X7 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HSSP:Q9CQJ4 HOGENOM:HOG000234133
HOVERGEN:HBG001357 EMBL:AK093201 EMBL:BC100983 EMBL:BC100984
EMBL:BC100985 EMBL:BC100986 IPI:IPI00167899 RefSeq:NP_001244954.1
RefSeq:NP_689833.1 UniGene:Hs.368004 ProteinModelPortal:Q495X7
SMR:Q495X7 STRING:Q495X7 PhosphoSite:Q495X7 DMDM:114154820
PaxDb:Q495X7 PRIDE:Q495X7 Ensembl:ENST00000341062
Ensembl:ENST00000508504 Ensembl:ENST00000512596 GeneID:166655
KEGG:hsa:166655 UCSC:uc003iqy.1 CTD:166655 GeneCards:GC04P165953
HGNC:HGNC:21162 HPA:HPA035810 neXtProt:NX_Q495X7
PharmGKB:PA134909634 eggNOG:NOG253525 InParanoid:Q495X7 KO:K12029
OMA:VSWKDLD OrthoDB:EOG4NP73C PhylomeDB:Q495X7 GenomeRNAi:166655
NextBio:88609 ArrayExpress:Q495X7 Bgee:Q495X7 CleanEx:HS_TRIM60
Genevestigator:Q495X7 Uniprot:Q495X7
Length = 471
Score = 130 (50.8 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACID-SWIDVKGKNYCPI 57
+NL C ICLEYLKD + +CGH FC +C+ SW D+ CP+
Sbjct: 8 VNLQEESSCPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPV 55
Score = 40 (19.1 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 267 KLVYERMVLLEQSMLEQKIKV---NNFELNLKQTEEIEDNVVLKLCNGVYFWKMYNFPAK 323
K+ Y+R + S EQ I++ N E+ L+Q ++ E N++ KL + ++ ++ +
Sbjct: 175 KVEYKREEI--NSEFEQ-IRLFLQNEQEMILRQIQDEEMNILAKLNENLV--ELSDYVST 229
Query: 324 LKEM-KEI 330
LK + +E+
Sbjct: 230 LKHLLREV 237
>UNIPROTKB|E1BG21 [details] [associations]
symbol:ZSWIM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043621 "protein self-association" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000433 InterPro:IPR007527 Pfam:PF04434 Pfam:PF13639
PROSITE:PS01357 PROSITE:PS50089 PROSITE:PS50135 PROSITE:PS50966
SMART:SM00184 SMART:SM00291 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 CTD:151112 KO:K15716 OMA:QVIYNPL
GeneTree:ENSGT00390000006826 EMBL:DAAA02003962 IPI:IPI00704453
RefSeq:NP_001179396.1 UniGene:Bt.61048 PRIDE:E1BG21
Ensembl:ENSBTAT00000009973 GeneID:517320 KEGG:bta:517320
NextBio:20872411 Uniprot:E1BG21
Length = 634
Score = 136 (52.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 48/166 (28%), Positives = 72/166 (43%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTS---CGHKFCAACIDSWIDVKGKNYCPIDEKVLTK 64
N+KL L P ++C +CL+ + T C HKF CIDSW+ K N CPID +V+
Sbjct: 335 NSKL-LAPGYQCRLCLKAFRRGQHTRQLPCTHKFHRKCIDSWLLYKC-NSCPIDGQVIYN 392
Query: 65 ----DDIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDS 120
+D ++ + + ++T KQ S+L IP LK ++P + I
Sbjct: 393 PLIWNDRAVNGHVHHSVSNTDVTHLPKQEESELFIPG-----TGLVLKQNKPGILPILPQ 447
Query: 121 PTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQ 166
S NT P N I ++ L+ S + CK Q
Sbjct: 448 RNSEKLNTPQSP-NDTYQNITIDNLYSIKLDDSNSRKSIYECKSNQ 492
Score = 37 (18.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 21/89 (23%), Positives = 36/89 (40%)
Query: 183 YDLKTSFHLELLFNKYCSD------GSQSTNT--PSHGRQDTSNQKEIEAYLMKNKEHES 234
Y+ K++ H F Y D G S+ T PS ++ + E + + K H +
Sbjct: 486 YECKSNQH----FPSYLQDLPTGSFGKTSSQTLFPSIDHKNIIHLTERKNPCINKKHHTN 541
Query: 235 KLWDPNKNQAGDDKSSEGDCSCKTCGDNS 263
+ NK+ G + S+ K DN+
Sbjct: 542 QSQKMNKSCKGTNHKSKKILGNKVREDNT 570
>UNIPROTKB|F1LUK5 [details] [associations]
symbol:Ftsjd2 "Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR000467 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF01585 PROSITE:PS50006
PROSITE:PS50089 PROSITE:PS50174 SMART:SM00184 SMART:SM00240
SMART:SM00443 RGD:1307801 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:2.60.200.20 SUPFAM:SSF49879
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
PANTHER:PTHR15067:SF3 IPI:IPI00777795 PRIDE:F1LUK5
Ensembl:ENSRNOT00000000641 ArrayExpress:F1LUK5 Uniprot:F1LUK5
Length = 748
Score = 119 (46.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
L+ +C IC EY DA+ +C H FC+ CI W+ K K CPI KD I++
Sbjct: 429 LENELQCIICSEYFIDAVTLNCAHSFCSFCISEWM--KRKVECPI----CRKD---IESR 479
Query: 73 TRREILENNLTCPYKQCSSQL 93
T +L+N ++ ++ SS +
Sbjct: 480 TNSLVLDNCISKMVERLSSDV 500
Score = 56 (24.8 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 151 NMQGSSNENFPCKFYQVGCREVFKSQALLE---KHYDLKTSFHLELLFNKYCSDGSQSTN 207
++ GS +E + G ++ FK+ +L+E Y + S +L+ +G +
Sbjct: 517 SLSGSDSETEGKQPCSDGFKDAFKADSLVEGTSSRYSMYNSVSQKLMAKMGFREG-EGLG 575
Query: 208 TPSHGRQD---TSNQK 220
S GR+D TSNQK
Sbjct: 576 KYSQGRKDIVETSNQK 591
>UNIPROTKB|Q5EBN2 [details] [associations]
symbol:TRIM61 "Putative tripartite motif-containing protein
61" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:Q9CQJ4 KO:K12029 EMBL:BC089393
IPI:IPI00058949 RefSeq:NP_001012414.1 UniGene:Hs.654633
ProteinModelPortal:Q5EBN2 SMR:Q5EBN2 STRING:Q5EBN2
PhosphoSite:Q5EBN2 DMDM:74741447 PRIDE:Q5EBN2
Ensembl:ENST00000329314 GeneID:391712 KEGG:hsa:391712
UCSC:uc003iqw.3 CTD:391712 GeneCards:GC04M165875 HGNC:HGNC:24339
HPA:HPA049109 neXtProt:NX_Q5EBN2 PharmGKB:PA134868214
eggNOG:NOG257669 HOGENOM:HOG000203866 HOVERGEN:HBG094090
InParanoid:Q5EBN2 OMA:SAHFNLR OrthoDB:EOG4SXNDK GenomeRNAi:391712
NextBio:104795 Bgee:Q5EBN2 CleanEx:HS_TRIM61 Genevestigator:Q5EBN2
Uniprot:Q5EBN2
Length = 209
Score = 119 (46.9 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACID-SWIDVKGKNYCP 56
C ICL+YLKD + SCGH FC +CI SW D+ CP
Sbjct: 16 CPICLDYLKDPVTISCGHNFCLSCIIMSWKDLHDSFPCP 54
>UNIPROTKB|F1RWB2 [details] [associations]
symbol:TRIM61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00700000104307
EMBL:CU693419 Ensembl:ENSSSCT00000009704 OMA:ISDHIST Uniprot:F1RWB2
Length = 460
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCPI 57
L C ICL+YL+D + T CGH FC +CI W D++G CP+
Sbjct: 10 LQAEASCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPV 55
>UNIPROTKB|I3LP53 [details] [associations]
symbol:LOC100621782 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:FP067415 RefSeq:XP_003356978.1
Ensembl:ENSSSCT00000028301 GeneID:100621782 KEGG:ssc:100621782
OMA:ESIHIRY Uniprot:I3LP53
Length = 460
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCPI 57
L C ICL+YL+D + T CGH FC +CI W D++G CP+
Sbjct: 10 LQAETSCPICLDYLQDPVTTDCGHNFCHSCILQRWEDLQGDFPCPV 55
>UNIPROTKB|F1RZ52 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 OMA:YEDWETD EMBL:CU311184
Ensembl:ENSSSCT00000001341 Ensembl:ENSSSCT00000036524
Uniprot:F1RZ52
Length = 545
Score = 127 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C V G + CP+ +K TK++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENI 65
>UNIPROTKB|O77666 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9823 "Sus scrofa" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AJ251829 CTD:7726
eggNOG:NOG291505 KO:K12008 OrthoDB:EOG42821H RefSeq:NP_001116681.1
UniGene:Ssc.54632 ProteinModelPortal:O77666 GeneID:100144460
KEGG:ssc:100144460 Uniprot:O77666
Length = 545
Score = 127 (49.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C V G + CP+ +K TK++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKENI 65
>UNIPROTKB|F1S2U2 [details] [associations]
symbol:F1S2U2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027130
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
Ensembl:ENSSSCT00000017000 Uniprot:F1S2U2
Length = 458
Score = 103 (41.3 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 39/153 (25%), Positives = 70/153 (45%)
Query: 267 KLVYERMVLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-NGVYFWKMYNFPAKLK 325
KL + V+LE + +N + L + EE ++ C G WK+ ++ + +
Sbjct: 268 KLSFSFAVVLEGETNKHDAHINIHKAQLSKNEE-RFKLLESACYTGKLIWKVTDYKLRKR 326
Query: 326 EMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHLVQGENDDILDWPF 381
E + + +S FY+S G R C R ++ + + +LSL+ +++GE F
Sbjct: 327 EALDGHTVSIFSQPFYTSRCGSRLCLRAYLNGDGSGKGTHLSLYFVVMRGEX-------F 379
Query: 382 VGRIRFTALNTSSEFSITDEIQSDKNFDSFKRP 414
R+ L+ S + T ++D N SFKRP
Sbjct: 380 RQRVTLMLLDQSGKKMAT--FKADPNSSSFKRP 410
Score = 67 (28.6 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 24/105 (22%), Positives = 42/105 (40%)
Query: 67 IFIDNYTRREILENNLTCPYKQ-CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPT-SS 124
+F DN +RE+L + C C++++ + Y+ H+ C + Q E +
Sbjct: 1 VFKDNCCKREVLNLYVFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCQEPVLRKD 60
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC 169
+ + R K L +N+Q + EN C Y V C
Sbjct: 61 LKEHASTYCQFREEKCLYCKKDVVVINLQ-NHEENL-CPEYPVSC 103
>UNIPROTKB|A6H736 [details] [associations]
symbol:RNF166 "RNF166 protein" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 Prosite:PS00518
Pfam:PF05605 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 GeneTree:ENSGT00530000063064
HOGENOM:HOG000230946 HOVERGEN:HBG074331 CTD:115992 eggNOG:NOG149065
OrthoDB:EOG4DJJX8 OMA:LVKHCVD EMBL:DAAA02046253 EMBL:BC146099
IPI:IPI00690931 RefSeq:NP_001092604.1 UniGene:Bt.62253
Ensembl:ENSBTAT00000027892 GeneID:614210 KEGG:bta:614210
InParanoid:A6H736 NextBio:20898997 Uniprot:A6H736
Length = 237
Score = 120 (47.3 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 13 LDPRFECSICLE-YLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
L+ ++ C ICLE Y + + SCGH FC C+ + V CP+ L D +D
Sbjct: 27 LEAQYSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSP-LCPLCR--LPFDPKKVDK 83
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC 105
E + P + CS ++++ + HV++C
Sbjct: 84 AAHVEKQLASYKAPCRGCSKKVTLAKMRVHVSSC 117
>ZFIN|ZDB-GENE-070912-110 [details] [associations]
symbol:ftr34 "finTRIM family, member 34"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-070912-110 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00670000097622
EMBL:BX323812 IPI:IPI01007435 Ensembl:ENSDART00000124702
Bgee:F1R925 Uniprot:F1R925
Length = 546
Score = 124 (48.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWI--DVKGKNYCPIDEKVL 62
+A + L+L F CS+CL+ LKD + CGH +C +CI D W D K CP +
Sbjct: 1 MAESSLSLAHHFSCSVCLDLLKDPVSIPCGHSYCMSCITDCWNQEDQKRVYSCPQCRQTF 60
Query: 63 TKDDIFIDNYTRREILE 79
+ N E+LE
Sbjct: 61 SPRPALAKNTMLAEVLE 77
Score = 46 (21.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 89 CSSQLSIPEYESHVNTCYLKYSQPSV 114
C S LS+ Y +++NT K +PSV
Sbjct: 477 CCSPLSLSFYHNNINT---KLPKPSV 499
>UNIPROTKB|F1PY34 [details] [associations]
symbol:RNF114 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 CTD:55905
GeneTree:ENSGT00530000063064 KO:K15697 OMA:IEHIQRR
EMBL:AAEX03013997 RefSeq:XP_534453.3 Ensembl:ENSCAFT00000018233
GeneID:477261 KEGG:cfa:477261 Uniprot:F1PY34
Length = 228
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 33/118 (27%), Positives = 48/118 (40%)
Query: 14 DP--RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
DP RF C +CLE + + CGH FC+AC+ + K K C + L +
Sbjct: 22 DPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPK-KPVCGVCRSALAPGVRAAE- 79
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDITDSPTSSFRN 127
R+I +C C + + +HV TC Y Y V+ T + RN
Sbjct: 80 -LERQIESTETSC--HGCRKNFFLSKIRAHVATCSKYQNYIMEGVKATTKDASLQPRN 134
>UNIPROTKB|A2AE48 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR020457
Pfam:PF00643 PRINTS:PR01406 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG001357 EMBL:AL662832 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:CR388382
EMBL:BX927189 UniGene:Hs.720054 UniGene:Hs.731863 HGNC:HGNC:12962
eggNOG:NOG291505 EMBL:AL662782 EMBL:AL671855 EMBL:AL845450
IPI:IPI00798036 SMR:A2AE48 Ensembl:ENST00000412755
Ensembl:ENST00000416596 Ensembl:ENST00000422802
Ensembl:ENST00000423901 Ensembl:ENST00000438785
Ensembl:ENST00000446196 Ensembl:ENST00000446540
Ensembl:ENST00000449136 HOGENOM:HOG000088612 Uniprot:A2AE48
Length = 248
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C + G CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENI 65
>MGI|MGI:1933159 [details] [associations]
symbol:Rnf114 "ring finger protein 114" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR015880
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 MGI:MGI:1933159
Prosite:PS00518 Pfam:PF05605 GO:GO:0007275 GO:GO:0030154
GO:GO:0046872 GO:GO:0008270 GO:GO:0007283 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OMA:IEHIQRR OrthoDB:EOG4CVG7Q
ChiTaRS:RNF114 EMBL:AF282919 EMBL:AF502145 EMBL:AK088441
EMBL:AK139030 EMBL:AK148290 EMBL:AK148392 EMBL:AK150086
EMBL:AK150263 EMBL:AK152687 EMBL:AK153452 EMBL:AK159818
EMBL:BC054416 EMBL:BC085146 IPI:IPI00113520 RefSeq:NP_109668.2
UniGene:Mm.22225 ProteinModelPortal:Q9ET26 SMR:Q9ET26 STRING:Q9ET26
PhosphoSite:Q9ET26 REPRODUCTION-2DPAGE:Q9ET26 PaxDb:Q9ET26
PRIDE:Q9ET26 Ensembl:ENSMUST00000078050 Ensembl:ENSMUST00000109214
GeneID:81018 KEGG:mmu:81018 InParanoid:Q9ET26 NextBio:350386
Bgee:Q9ET26 Genevestigator:Q9ET26 GermOnline:ENSMUSG00000006418
Uniprot:Q9ET26
Length = 229
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 32/118 (27%), Positives = 49/118 (41%)
Query: 14 DP--RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
DP RF C +CLE + + CGH FC+AC+ + K K C + L ++
Sbjct: 23 DPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPK-KPVCGVCRSALAPGVRAVE- 80
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDITDSPTSSFRN 127
R+I +C C + + +HV +C Y Y V+ T + RN
Sbjct: 81 -LERQIESIETSC--HGCRKNFILSKIRAHVTSCSKYQNYIMEGVKATTKDASLQPRN 135
>UNIPROTKB|O76064 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9606
"Homo sapiens" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010212 "response
to ionizing radiation" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0045739 "positive regulation of DNA repair" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IDA] [GO:0033522
"histone H2A ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0045900 "negative regulation of translational
elongation" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IDA] [GO:0000781 "chromosome, telomeric
region" evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0036297 "interstrand cross-link repair"
evidence=TAS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0043486 "histone exchange"
evidence=ISS] [GO:0070535 "histone H2A K63-linked ubiquitination"
evidence=IMP;IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0033523 "histone H2B ubiquitination" evidence=ISS] [GO:0070534
"protein K63-linked ubiquitination" evidence=IDA] [GO:0045190
"isotype switching" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0042803 EMBL:CH471081
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0051865 GO:GO:0000781 GO:GO:0006303
GO:GO:0033523 GO:GO:0036297 GO:GO:0045900 GO:GO:0035861
GO:GO:0070535 HOVERGEN:HBG023954 KO:K10667 CTD:9025
eggNOG:NOG242257 HOGENOM:HOG000154169 OMA:EVTEEDW OrthoDB:EOG4TF0KP
PANTHER:PTHR15067:SF3 EMBL:AB012770 EMBL:AF334675 EMBL:AB014546
EMBL:AK298319 EMBL:BT007446 EMBL:AK222765 EMBL:AL096712
EMBL:BC007517 IPI:IPI00022561 IPI:IPI00923427 RefSeq:NP_003949.1
RefSeq:NP_898901.1 UniGene:Hs.485278 PDB:2CSW PDB:2PIE PDB:4AYC
PDB:4EPO PDBsum:2CSW PDBsum:2PIE PDBsum:4AYC PDBsum:4EPO
ProteinModelPortal:O76064 SMR:O76064 DIP:DIP-31265N IntAct:O76064
MINT:MINT-1459889 STRING:O76064 PhosphoSite:O76064 PaxDb:O76064
PRIDE:O76064 DNASU:9025 Ensembl:ENST00000229866
Ensembl:ENST00000373479 Ensembl:ENST00000394443
Ensembl:ENST00000469731 GeneID:9025 KEGG:hsa:9025 UCSC:uc003onq.4
GeneCards:GC06P037321 HGNC:HGNC:10071 MIM:611685 neXtProt:NX_O76064
PharmGKB:PA34445 PhylomeDB:O76064 EvolutionaryTrace:O76064
GenomeRNAi:9025 NextBio:33813 ArrayExpress:O76064 Bgee:O76064
CleanEx:HS_RNF8 Genevestigator:O76064 GermOnline:ENSG00000112130
Uniprot:O76064
Length = 485
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK-VLTKD-DIFID 70
L+ +C IC EY +A+ +C H FC+ CI+ W+ K K CPI K + +K + +D
Sbjct: 397 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKIECPICRKDIKSKTYSLVLD 454
Query: 71 NYTRREILENNLTCPYKQ 88
N + + NNL+ K+
Sbjct: 455 NCINKMV--NNLSSEVKE 470
>UNIPROTKB|Q5R4I2 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9601
"Pongo abelii" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950 PROSITE:PS50006
PROSITE:PS50089 SMART:SM00184 SMART:SM00240 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005634 GO:GO:0042803 GO:GO:0051301
GO:GO:0007067 GO:GO:0007286 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0010212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043486
GO:GO:0045190 GO:GO:0004842 GO:GO:0030496 GO:GO:0042393
GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907 GO:GO:0070936
GO:GO:0000781 GO:GO:0006303 GO:GO:0033523 GO:GO:0045900
GO:GO:0035861 GO:GO:0070535 HSSP:O76064 HOVERGEN:HBG023954
KO:K10667 CTD:9025 PANTHER:PTHR15067:SF3 EMBL:CR861266
RefSeq:NP_001126963.1 UniGene:Pab.1586 ProteinModelPortal:Q5R4I2
SMR:Q5R4I2 GeneID:100173982 KEGG:pon:100173982 InParanoid:Q5R4I2
Uniprot:Q5R4I2
Length = 486
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK-VLTKD-DIFID 70
L+ +C IC EY +A+ +C H FC+ CI+ W+ K K CPI K + +K + +D
Sbjct: 398 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKIECPICRKDIKSKTYSLVLD 455
Query: 71 NYTRREILENNLTCPYKQ 88
N + + NNL+ K+
Sbjct: 456 NCINKMV--NNLSSEVKE 471
>TAIR|locus:2064584 [details] [associations]
symbol:AT2G42030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0046872 GO:GO:0008270 EMBL:U90439 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:P15919 EMBL:AY058184
EMBL:AY072117 EMBL:AY096666 IPI:IPI00537204 PIR:A84849
RefSeq:NP_181733.1 UniGene:At.20315 UniGene:At.74233
ProteinModelPortal:P93744 SMR:P93744 EnsemblPlants:AT2G42030.1
GeneID:818803 KEGG:ath:AT2G42030 TAIR:At2g42030 eggNOG:NOG251015
HOGENOM:HOG000090666 InParanoid:P93744 OMA:SEAKECP PhylomeDB:P93744
ProtClustDB:CLSN2683808 ArrayExpress:P93744 Genevestigator:P93744
Uniprot:P93744
Length = 425
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI---DEKVLTKDDIFIDNYT 73
F+C ICL+ KD ++T+CGH +C +C+ W+ V CP+ + V T I+
Sbjct: 139 FDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQVSEAKECPVCKGEVSVKTVTPIYGRGIQ 198
Query: 74 RREILE-NNLTCP 85
+RE E +N P
Sbjct: 199 KRESEEVSNTKIP 211
>MGI|MGI:1278335 [details] [associations]
symbol:Lnx1 "ligand of numb-protein X 1" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 PROSITE:PS50089 PROSITE:PS50106 SMART:SM00184
SMART:SM00228 UniPathway:UPA00143 MGI:MGI:1278335 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030165 SUPFAM:SSF50156
GO:GO:0004842 InterPro:IPR017907 GO:GO:0042787
GeneTree:ENSGT00650000092901 CTD:84708 eggNOG:NOG236845
HOGENOM:HOG000261605 HOVERGEN:HBG039539 KO:K10692 OMA:LQHCKKS
EMBL:AF034745 EMBL:AF034746 EMBL:AK044127 EMBL:BC040367
IPI:IPI00116502 IPI:IPI00331050 IPI:IPI00466470 PIR:T09457
PIR:T09458 RefSeq:NP_001153049.1 RefSeq:NP_001153050.1
RefSeq:NP_001153051.1 RefSeq:NP_001153052.1 RefSeq:NP_034857.3
UniGene:Mm.440403 ProteinModelPortal:O70263 SMR:O70263
MINT:MINT-253029 STRING:O70263 PhosphoSite:O70263 PRIDE:O70263
Ensembl:ENSMUST00000039744 Ensembl:ENSMUST00000087161
Ensembl:ENSMUST00000117388 Ensembl:ENSMUST00000117525 GeneID:16924
KEGG:mmu:16924 UCSC:uc008xtt.2 UCSC:uc008xtu.2 InParanoid:O70263
OrthoDB:EOG48KR9R ChiTaRS:LNX1 NextBio:290980 Bgee:O70263
CleanEx:MM_LNX1 Genevestigator:O70263 GermOnline:ENSMUSG00000029228
Uniprot:O70263
Length = 728
Score = 129 (50.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
++D C ICL+ L D + T CGH +C C+ +++ V+ K++CP+D K + +
Sbjct: 38 DVDDDLICHICLQALLDPLDTPCGHTYCTLCLTNFL-VE-KDFCPVDRKPVVLQHCKKSS 95
Query: 72 YTRREILENNL-TCPYKQ-CSSQLSIPEYESHVNT 104
++L L TCP+ + C+ L + + H T
Sbjct: 96 ILVNKLLNKLLVTCPFTEHCTEVLQRCDLQHHFQT 130
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 120 SPTSSFRNTSGIPTNKRNSKILTVTVFP-EHLNMQ---GSSNENFPCKFYQV 167
SP RNT+ P + K+++V P E L M G+S+ + Y +
Sbjct: 488 SPGPGERNTASKPAATCHEKVVSVWKDPSESLGMTVGGGASHREWDLPIYVI 539
Score = 37 (18.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 201 DGSQSTNTPSHGRQDTSNQKEIEAYLMKNK 230
DG N+ GR + + + E M+++
Sbjct: 194 DGEPVANSSDSGRSNRTRARPFERSTMRSR 223
>ZFIN|ZDB-GENE-081104-397 [details] [associations]
symbol:lonrf1l "LON peptidase N-terminal domain and
ring finger 1, like" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003111 InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-081104-397
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
GO:GO:0004176 GeneTree:ENSGT00440000033329 EMBL:CR786572
EMBL:CU468725 EMBL:CU856174 IPI:IPI00996938 RefSeq:XP_003199128.1
UniGene:Dr.116034 Ensembl:ENSDART00000144516 GeneID:100317496
KEGG:dre:100317496 CTD:100317496 Uniprot:F1QJQ0
Length = 751
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 27/79 (34%), Positives = 43/79 (54%)
Query: 3 HQPVANNKLNLDPR-FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKV 61
HQ + N L DP FECS+C+ + T CGH FC C++ +D + CP+ ++
Sbjct: 442 HQTLPKNLL--DPNDFECSLCMRLFYQPVTTPCGHTFCTNCLERCLDHNPQ--CPLCKES 497
Query: 62 LTKDDIFIDNYTRREILEN 80
L K+ + YT ++L+N
Sbjct: 498 L-KEYLAFRKYTVTQVLDN 515
>ZFIN|ZDB-GENE-070912-196 [details] [associations]
symbol:ftr12 "finTRIM family, member 12"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-196 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 EMBL:BX005083 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00670000097622 IPI:IPI00637143
Ensembl:ENSDART00000056161 Bgee:F1QYZ8 Uniprot:F1QYZ8
Length = 547
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 28/78 (35%), Positives = 41/78 (52%)
Query: 6 VANNKLNL-DPRFECSICLEYLKDAILTSCGHKFCAACI-DSWI--DVKGKNYCPIDEKV 61
+A + L+L +F CS+CLE LKD++ CGH +C +CI D W + KG CP +
Sbjct: 1 MAESTLSLAQDQFNCSLCLELLKDSVAIPCGHSYCMSCISDCWDQDEQKGVYSCPQCRQT 60
Query: 62 LTKDDIFIDNYTRREILE 79
T N E++E
Sbjct: 61 FTPRPALGKNTMLTEVVE 78
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 101 (40.6 bits), Expect = 0.00014, P = 0.00014
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
F C IC + +++A +T CGH FC CI ++ N CP V+ D N+
Sbjct: 39 FVCPICFDMIEEAYMTKCGHSFCYKCIHQ--SLEDNNRCPKCNYVVDNIDHLYPNF 92
>UNIPROTKB|F1S2U3 [details] [associations]
symbol:F1S2U3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR002083 InterPro:IPR008974
InterPro:IPR012227 InterPro:IPR013323 InterPro:IPR027130
Pfam:PF00917 PIRSF:PIRSF015614 PROSITE:PS50144 PROSITE:PS50145
SMART:SM00061 GO:GO:0007165 GO:GO:0042981 GO:GO:0046872
GO:GO:0008270 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00550000074359 PANTHER:PTHR10131:SF23
Ensembl:ENSSSCT00000016999 OMA:NNELERT Uniprot:F1S2U3
Length = 461
Score = 101 (40.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 256 CKTCGDNSHLLKLVYERM--VLLEQSMLEQKIKVNNFELNLKQTEEIEDNVVLKLC-NGV 312
C+ + + K +E++ ++LE + +N + L + EE ++ C G
Sbjct: 258 CQNLIGSLQITKFHFEQILKIVLEGETNKHDAHINIHKAQLSKNEE-RFKLLESACYTGK 316
Query: 313 YFWKMYNFPAKLKEMKEINRY-FYSACFYSSCFGYRFCTRVNISREDA---QYLSLFIHL 368
WK+ ++ + +E + + +S FY+S G R C R ++ + + +LSL+ +
Sbjct: 317 LIWKVTDYKLRKREALDGHTVSIFSQPFYTSRCGSRLCLRAYLNGDGSGKGTHLSLYFVV 376
Query: 369 VQGENDDILDWPFVGRIRFTALNTSSEFSITDEIQSDKNFDSFKRP 414
++GE F R+ L+ S + T ++D N SFKRP
Sbjct: 377 MRGEX-------FRQRVTLMLLDQSGKKMAT--FKADPNSSSFKRP 413
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 24/105 (22%), Positives = 42/105 (40%)
Query: 67 IFIDNYTRREILENNLTCPYKQ-CSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPT-SS 124
+F DN +RE+L + C C++++ + Y+ H+ C + Q E +
Sbjct: 1 VFKDNCCKREVLNLYVFCKNAPGCTAKIILGRYQDHLQQCLFQAVQCCNERCQEPVLRKD 60
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGC 169
+ + R K L +N+Q + EN C Y V C
Sbjct: 61 LKEHASTYCQFREEKCLYCKKDVVVINLQ-NHEENL-CPEYPVSC 103
>ZFIN|ZDB-GENE-090313-307 [details] [associations]
symbol:pdzrn3a "PDZ domain containing RING finger
3a" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR001478
InterPro:IPR008974 InterPro:IPR013010 InterPro:IPR013323
PROSITE:PS50089 PROSITE:PS50106 PROSITE:PS50145 PROSITE:PS51081
SMART:SM00184 SMART:SM00228 Prosite:PS00518
ZFIN:ZDB-GENE-090313-307 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00510000046421 EMBL:CR354544 EMBL:CT027567
IPI:IPI00897410 ProteinModelPortal:E7FGS6
Ensembl:ENSDART00000112965 Uniprot:E7FGS6
Length = 1033
Score = 128 (50.1 bits), Expect = 0.00015, P = 0.00015
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP C +C + L+D + T CGH FCAAC W+ N CP+ + ++ ++
Sbjct: 12 VDPDLICKLCGKVLEDPLATPCGHVFCAACALQWLSKV--NSCPVQCQKISNKELNQVLP 69
Query: 73 TRREILENNLTCPYKQ--CSSQLSIPEYESHVNTC 105
+ IL+ ++ C +++ C+ + + H C
Sbjct: 70 LKNLILKLDIKCDHRERGCARVMKLQHLAEHAEMC 104
>ZFIN|ZDB-GENE-070912-106 [details] [associations]
symbol:ftr30 "finTRIM family, member 30"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070912-106
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR006574 SMART:SM00589 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX323812
IPI:IPI01007119 Ensembl:ENSDART00000141876 OMA:SICTELY
Uniprot:B0S650
Length = 508
Score = 115 (45.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWI--DVKGKNYCPIDEKVL 62
+A + ++ F CS+CL+ LKD + CGH +C +CI D W D K CP +
Sbjct: 5 MAESSVSWAHHFSCSVCLDLLKDPVSIPCGHSYCMSCITDCWNQEDQKRVYSCPQCRQTF 64
Query: 63 TKDDIFIDNYTRREILE 79
+ N E+LE
Sbjct: 65 SPRPALAKNTMLAEVLE 81
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/111 (26%), Positives = 46/111 (41%)
Query: 66 DIFIDNYTR-REILENNLTCPYKQCSSQLS----IPEYESHVNTCYLKYSQPSVEDITDS 120
D ++ +R R+ L+ T K SS++S IP E+ +L+YSQ D
Sbjct: 336 DQLAESVSRLRDKLQQFCTEEMKTISSRVSSISRIPAPEAQTREQFLQYSQQFTLDPNTV 395
Query: 121 PTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCRE 171
+ + ++S V +P+H + F C YQV CRE
Sbjct: 396 NNCLVLSEGNTAVDYKDS----VQPYPDH-------PDRFDCS-YQVFCRE 434
>FB|FBgn0052847 [details] [associations]
symbol:CG32847 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 EMBL:AE014296
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P28990 GeneTree:ENSGT00390000014107
EMBL:BT044276 RefSeq:NP_730026.1 UniGene:Dm.34005 SMR:Q8IQM1
EnsemblMetazoa:FBtr0075639 GeneID:318245 KEGG:dme:Dmel_CG32847
UCSC:CG32847-RB FlyBase:FBgn0052847 InParanoid:Q8IQM1
OrthoDB:EOG43R24T GenomeRNAi:318245 NextBio:845309 Uniprot:Q8IQM1
Length = 164
Score = 111 (44.1 bits), Expect = 0.00015, P = 0.00015
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDIFIDNYTRR 75
+EC+ICL+ ++A+++ CGH FC C+ WI K + CP+ + + + + I Y R
Sbjct: 16 YECNICLDTAQNAVVSMCGHLFCWPCLYQWILTKPDHTVCPVCKSGVDRSKV-IPVYARN 74
Query: 76 E 76
+
Sbjct: 75 D 75
>ZFIN|ZDB-GENE-070912-111 [details] [associations]
symbol:ftr35 "finTRIM family, member 35"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070912-111
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR006574 SMART:SM00589 eggNOG:NOG253021 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 EMBL:BX323812
IPI:IPI00868122 Ensembl:ENSDART00000140840 OMA:NILREEW
Uniprot:B0S647
Length = 505
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 27/77 (35%), Positives = 38/77 (49%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWI--DVKGKNYCPIDEKVL 62
+A + L+L F CS+CL+ LKD + CGH +C +CI D W D K CP +
Sbjct: 1 MAESSLSLAHHFSCSVCLDLLKDPVSIPCGHNYCMSCITDCWNQEDQKRVYSCPQCRQTF 60
Query: 63 TKDDIFIDNYTRREILE 79
+ N E+LE
Sbjct: 61 SPRPALAKNTMLAEVLE 77
>ZFIN|ZDB-GENE-070912-223 [details] [associations]
symbol:ftr09 "finTRIM family, member 9"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-223 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00619609
Ensembl:ENSDART00000134802 OMA:DNTEAIF Uniprot:B0S717
Length = 289
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 6 VANNKLNL--DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDV---KGKNYCPIDEK 60
+A + ++L + +F CSIC++ LKD + CGH +C +CI + D KG CP +
Sbjct: 1 MAESSVSLAQEHQFNCSICVDLLKDPVAIPCGHSYCMSCISGYWDQDEQKGVYSCPQCRQ 60
Query: 61 VLTKDDIFIDNYTRREILEN 80
T N E++EN
Sbjct: 61 TFTPRPALRKNTMLAEVVEN 80
>ZFIN|ZDB-GENE-060503-295 [details] [associations]
symbol:trim35-23 "tripartite motif containing
35-23" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060503-295 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:NOG285726
OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496 HOVERGEN:HBG106887
EMBL:AL954363 IPI:IPI00610029 RefSeq:NP_001038426.1
UniGene:Dr.74108 Ensembl:ENSDART00000140268 GeneID:561453
KEGG:dre:561453 OMA:ALINTSH NextBio:20883935 Uniprot:Q1MT10
Length = 451
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 57/231 (24%), Positives = 95/231 (41%)
Query: 11 LNLDPR-FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDD--- 66
LN+ C +C E K+ +L SC H FC C+ + K CP+ K ++DD
Sbjct: 4 LNVSAEELSCPVCCEIFKNPVLLSCSHSFCKECLQQFWRTKKTQECPVCRKS-SRDDPPL 62
Query: 67 -IFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSP---T 122
+ + N + + NLTC S ++ E C L+ QP DS
Sbjct: 63 NLILKNMCELLLKDRNLTC--SSGSEEICSLHSEKLKLFC-LEDKQPVCLVCRDSKQHDN 119
Query: 123 SSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKH 182
FR S + ++ + K+ T + L + NE +F + + KSQA H
Sbjct: 120 HKFRPISEVVSSYKE-KLNTAL---KSLQKKLKHNEKMQAEFEKTV--QHIKSQA---DH 170
Query: 183 YDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHE 233
+ + E L +++ D ++T T R++ +K+ +MK K E
Sbjct: 171 TERQVKHEFEKL-HQFLRDEEEATITAL--REEEEQKKQ----MMKEKLEE 214
>ZFIN|ZDB-GENE-070912-195 [details] [associations]
symbol:ftr11 "finTRIM family, member 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070912-195 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 EMBL:BX005083 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 eggNOG:NOG253021
OrthoDB:EOG4R23TJ GeneTree:ENSGT00670000097622 HOGENOM:HOG000234136
HOVERGEN:HBG106862 EMBL:BC154553 IPI:IPI00491896
RefSeq:XP_003197971.1 UniGene:Dr.114000 SMR:A8WG25
Ensembl:ENSDART00000005767 GeneID:569723 KEGG:dre:569723 CTD:569723
OMA:RITNTES NextBio:20889815 Uniprot:A8WG25
Length = 546
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACI-DSWI--DVKGKNYCPIDEKVLTKDDIFIDNY 72
+F CSICL+ LKD++ CGH +C +CI D W + KG CP + T N
Sbjct: 12 QFSCSICLDLLKDSVAIPCGHSYCMSCISDCWDQDERKGVYSCPQCRQSFTPRPALGKNT 71
Query: 73 TRREILEN 80
E++EN
Sbjct: 72 MLTEVMEN 79
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 123 (48.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
+LD C IC++ +KDA LT+CGH FC CI + + + K+ CP + LT + ++ N
Sbjct: 45 DLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHL--RNKSDCPCCSQHLTNNQLY-PN 101
Query: 72 YTRREILE 79
+ ++L+
Sbjct: 102 FLLDKLLK 109
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 226 LMKNKEHESKLW--DPNKNQAGDDKSSEGDCSCK 257
LM+ +EHE + W D ++ + S DC K
Sbjct: 456 LMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVK 489
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 100 (40.3 bits), Expect = 0.00018, P = 0.00018
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACID-----SWIDVKGKNYCPI 57
+N+ C ICLE L + CGH FC AC+ S +D KG++ CP+
Sbjct: 7 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLD-KGESSCPV 57
>ZFIN|ZDB-GENE-060929-548 [details] [associations]
symbol:btr12 "bloodthirsty-related gene family,
member 12" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060929-548 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862
GeneTree:ENSGT00660000095328 EMBL:BX664721 EMBL:BC124441
IPI:IPI00800043 RefSeq:NP_001070087.1 UniGene:Dr.87957
Ensembl:ENSDART00000110769 GeneID:767681 KEGG:dre:767681 CTD:767681
eggNOG:NOG331569 InParanoid:Q08C26 OrthoDB:EOG4640BN
NextBio:20918071 Uniprot:Q08C26
Length = 562
Score = 121 (47.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTK 64
P + ++ + +F CSICLE + + T CGH FC AC++ + + + CP+ +K ++
Sbjct: 4 PQSPGRMLSEEQFSCSICLEVFVEPVSTPCGHTFCKACLEGFWNHSKRFLCPMCKKTFSR 63
Query: 65 DDIFIDNYTRREILE 79
N EI E
Sbjct: 64 KPELSVNCVLAEIAE 78
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 233 ESKLWDPNKNQAGDDKSSEGDCSCKTCGDNSH 264
E K+ +K +E C CK C ++SH
Sbjct: 166 EDKMCKTHKRLLDAYCRNEHACVCKECAESSH 197
>ZFIN|ZDB-GENE-070912-225 [details] [associations]
symbol:ftr03 "finTRIM family, member 3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-070912-225 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:KOG2177 EMBL:BX572635 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOVERGEN:HBG106862 IPI:IPI00868407
Ensembl:ENSDART00000143094 OMA:ACEESIQ Uniprot:B0S723
Length = 276
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACI-DSWI--DVKGKNYCPIDEKVLTKDDIFIDNY 72
+F CSICL+ LKD + CGH +C +CI D W + +G CP + T N
Sbjct: 13 QFNCSICLDLLKDPVAIPCGHSYCMSCISDYWDQDEWRGVYSCPQCRQTFTPRPALGKNT 72
Query: 73 TRREILEN 80
E++EN
Sbjct: 73 MLTEVVEN 80
>TAIR|locus:2128746 [details] [associations]
symbol:RMA1 "RING membrane-anchor 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0032527
"protein exit from endoplasmic reticulum" evidence=IMP] [GO:0016020
"membrane" evidence=IDA] [GO:0032940 "secretion by cell"
evidence=IGI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032940 GO:GO:0016020
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 InterPro:IPR017907
HSSP:P38398 EMBL:AF071527 EMBL:AL161497 GO:GO:0032527 EMBL:AB008518
EMBL:BT003833 EMBL:BT005188 IPI:IPI00517108 PIR:T52142
RefSeq:NP_192260.1 RefSeq:NP_974506.1 UniGene:At.239
ProteinModelPortal:O64425 SMR:O64425 IntAct:O64425 STRING:O64425
PRIDE:O64425 EnsemblPlants:AT4G03510.1 EnsemblPlants:AT4G03510.2
GeneID:825654 KEGG:ath:AT4G03510 TAIR:At4g03510 eggNOG:NOG283810
HOGENOM:HOG000238304 InParanoid:O64425 KO:K10666 OMA:CKSKVSH
PhylomeDB:O64425 ProtClustDB:CLSN2685946 Genevestigator:O64425
Uniprot:O64425
Length = 249
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00018
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 14 DPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK 50
D F+C+ICL+ +++ ++T CGH FC CI W+DV+
Sbjct: 43 DSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQ 79
>UNIPROTKB|F1NM74 [details] [associations]
symbol:TRIM7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Pfam:PF00097
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 EMBL:AADN02030125 EMBL:AADN02030126
IPI:IPI00585027 Ensembl:ENSGALT00000000149 OMA:FLKKERQ
ArrayExpress:F1NM74 Uniprot:F1NM74
Length = 477
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCP 56
NL CS+CLE+ KD + CGH FC ACI SW D++ CP
Sbjct: 9 NLQDEATCSVCLEFFKDPVSIECGHNFCRACIVKSWKDLEMDFPCP 54
>UNIPROTKB|Q9Y577 [details] [associations]
symbol:TRIM17 "E3 ubiquitin-protein ligase TRIM17"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 EMBL:AL139288
EMBL:AL670729 HOVERGEN:HBG001357 HOGENOM:HOG000234134 CTD:51127
eggNOG:NOG317461 KO:K12007 EMBL:AF156271 EMBL:AK301105
EMBL:BC033788 IPI:IPI00479218 IPI:IPI00913955 RefSeq:NP_001020111.1
RefSeq:NP_001128327.1 RefSeq:NP_057186.1 UniGene:Hs.121748
ProteinModelPortal:Q9Y577 SMR:Q9Y577 IntAct:Q9Y577
MINT:MINT-1433750 STRING:Q9Y577 PhosphoSite:Q9Y577 DMDM:38605530
PRIDE:Q9Y577 Ensembl:ENST00000295033 Ensembl:ENST00000366697
Ensembl:ENST00000366698 Ensembl:ENST00000456946 GeneID:51127
KEGG:hsa:51127 UCSC:uc001hsu.3 UCSC:uc009xfb.2
GeneCards:GC01M228595 HGNC:HGNC:13430 MIM:606123 neXtProt:NX_Q9Y577
PharmGKB:PA37768 InParanoid:Q9Y577 OMA:HYWEVGL PhylomeDB:Q9Y577
GenomeRNAi:51127 NextBio:53935 ArrayExpress:Q9Y577 Bgee:Q9Y577
CleanEx:HS_TRIM17 Genevestigator:Q9Y577 GermOnline:ENSG00000162931
Uniprot:Q9Y577
Length = 477
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACID-SWIDVKGK 52
CSICL+Y D ++T+CGH FC ACI SW +GK
Sbjct: 16 CSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGK 50
>UNIPROTKB|E9PPC4 [details] [associations]
symbol:RAG1 "Endonuclease RAG1" species:9606 "Homo sapiens"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016788 "hydrolase activity, acting on
ester bonds" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0033151 "V(D)J recombination"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR013087
InterPro:IPR015880 InterPro:IPR019485 InterPro:IPR024627
Pfam:PF10426 Pfam:PF12940 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 Prosite:PS00518 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.160.60 GO:GO:0016788
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GO:GO:0033151 InterPro:IPR023336
PANTHER:PTHR11539 PROSITE:PS51487 EMBL:AC139427 HGNC:HGNC:9831
EMBL:AC061999 IPI:IPI00975927 ProteinModelPortal:E9PPC4 SMR:E9PPC4
Ensembl:ENST00000534663 ArrayExpress:E9PPC4 Bgee:E9PPC4
Uniprot:E9PPC4
Length = 931
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREIL 78
C IC L D + T+C H FC CI + V G +YCP D+ + +L
Sbjct: 293 CQICEHILADPVETNCKHVFCRVCILRCLKVMG-SYCPSCRYPCFPTDLESPVKSFLSVL 351
Query: 79 ENNLT-CPYKQCSSQLSIPEYESHVNT 104
+ + CP K+C+ ++S+ +Y H+++
Sbjct: 352 NSLMVKCPAKECNEEVSLEKYNHHISS 378
>MGI|MGI:2684881 [details] [associations]
symbol:Trim40 "tripartite motif-containing 40" species:10090
"Mus musculus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 MGI:MGI:2684881 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 HSSP:Q9CQJ4
GeneTree:ENSGT00700000104499 CTD:135644 eggNOG:NOG263238
HOGENOM:HOG000060264 HOVERGEN:HBG057956 KO:K12016 OMA:HYKERLN
OrthoDB:EOG4W9J4P EMBL:AK136498 EMBL:BC147336 EMBL:BC147337
IPI:IPI00355276 RefSeq:NP_001028407.1 UniGene:Mm.32606
ProteinModelPortal:Q3UWA4 SMR:Q3UWA4 PhosphoSite:Q3UWA4
PRIDE:Q3UWA4 Ensembl:ENSMUST00000087158 GeneID:195359
KEGG:mmu:195359 UCSC:uc008clk.2 InParanoid:B2RVT3 NextBio:371759
Bgee:Q3UWA4 CleanEx:MM_TRIM40 Genevestigator:Q3UWA4 Uniprot:Q3UWA4
Length = 246
Score = 117 (46.2 bits), Expect = 0.00023, P = 0.00023
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 11 LNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWID---VKGKNYCPIDEKVLTKDDI 67
L+ D + C ICL+ LK+A+ T C H FC C+ +D V G CP+ K + + +
Sbjct: 4 LDKDNQDICPICLDPLKEAVSTDCRHLFCRMCLTQHMDKASVSGILSCPVCRKPCS-EGV 62
Query: 68 FIDNY---TRREILENNLTCP-YKQCSSQLSIPEYESH 101
DNY T ++ + + C L PE++SH
Sbjct: 63 LGDNYICHTHQKRVRRFCEASGHLLCEECLQSPEHQSH 100
>DICTYBASE|DDB_G0288619 [details] [associations]
symbol:DDB_G0288619 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0288619 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000119 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG46770 RefSeq:XP_636636.1
ProteinModelPortal:Q54IP3 EnsemblProtists:DDB0188021 GeneID:8626717
KEGG:ddi:DDB_G0288619 InParanoid:Q54IP3 OMA:RECINNA Uniprot:Q54IP3
Length = 275
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 30/93 (32%), Positives = 48/93 (51%)
Query: 13 LDPRFECSICLEYLKDAILTS-CGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
+D EC+ICLE L D ++ S CG FC CI++ I VK CP+ ++ + +
Sbjct: 23 IDNGLECAICLEVLNDPVVESQCGQMFCRECINNAISVKP--ICPLCNQMASIG--IVAK 78
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYES-HVN 103
Y ++ E +TC S + EY+S H++
Sbjct: 79 YVSNKLNEALVTCTLCDDVSSIKRGEYKSMHLD 111
>UNIPROTKB|Q0VCV5 [details] [associations]
symbol:LNX2 "Ligand of numb-protein X 2" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00595 InterPro:IPR001841
InterPro:IPR001478 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50106
SMART:SM00184 SMART:SM00228 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0051260 Gene3D:3.30.40.10 InterPro:IPR013083
SUPFAM:SSF50156 InterPro:IPR017907 GeneTree:ENSGT00650000092901
eggNOG:NOG236845 HOGENOM:HOG000261605 HOVERGEN:HBG039539 KO:K10692
CTD:222484 OMA:EKDFCPL OrthoDB:EOG4ZW59N EMBL:DAAA02033162
EMBL:BC119977 IPI:IPI00714475 RefSeq:NP_001069352.1
UniGene:Bt.55382 STRING:Q0VCV5 Ensembl:ENSBTAT00000020741
GeneID:526424 KEGG:bta:526424 InParanoid:Q0VCV5 NextBio:20874366
Uniprot:Q0VCV5
Length = 682
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
N + +D C ICL+ L + T CGH FC C+ +++ + K++CP+D K L
Sbjct: 39 NYQDEVDDDLVCHICLQPLLQPLDTPCGHTFCCKCLRNFL--QEKDFCPLDRKKLHFKSC 96
Query: 68 FIDNYTRREILENNL-TCPYKQ-CSSQLSIPEYESHV-NTC 105
+ ++L+ L +CP+ C + + E H+ N C
Sbjct: 97 KKSSILVHKLLDKLLISCPFSSVCHDVMQRCDLEGHLKNRC 137
>UNIPROTKB|P15918 [details] [associations]
symbol:RAG1 "V(D)J recombination-activating protein 1"
species:9606 "Homo sapiens" [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0070244 "negative regulation of thymocyte
apoptotic process" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=ISS] [GO:0002331 "pre-B cell allelic
exclusion" evidence=ISS] [GO:0033151 "V(D)J recombination"
evidence=ISS] [GO:0033077 "T cell differentiation in thymus"
evidence=ISS] [GO:0010390 "histone monoubiquitination"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0030183 "B cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0006310 "DNA recombination"
evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0004519 "endonuclease activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR019485
InterPro:IPR024627 Pfam:PF10426 Pfam:PF12940 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Prosite:PS00518 GO:GO:0005634
GO:GO:0043154 GO:GO:0042803 GO:GO:0006955 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.160.60 GO:GO:0033077
GO:GO:0070244 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004519
GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907 GO:GO:0051865
GO:GO:0002331 GO:GO:0010390 MIM:603554 Orphanet:39041 Orphanet:275
GO:GO:0033151 CTD:5896 eggNOG:NOG45367 HOGENOM:HOG000232009
HOVERGEN:HBG003861 KO:K10628 OrthoDB:EOG4PRSPZ InterPro:IPR023336
PANTHER:PTHR11539 PROSITE:PS51487 EMBL:M29474 EMBL:AY130302
EMBL:AC139427 IPI:IPI00013914 PIR:A33754 RefSeq:NP_000439.1
UniGene:Hs.677010 UniGene:Hs.73958 ProteinModelPortal:P15918
SMR:P15918 IntAct:P15918 MINT:MINT-1511469 STRING:P15918
PhosphoSite:P15918 PaxDb:P15918 PRIDE:P15918
Ensembl:ENST00000299440 GeneID:5896 KEGG:hsa:5896 UCSC:uc001mwu.4
GeneCards:GC11P036546 HGNC:HGNC:9831 MIM:179615 MIM:233650
MIM:601457 MIM:609889 neXtProt:NX_P15918 Orphanet:157949
Orphanet:231154 PharmGKB:PA34185 InParanoid:P15918 OMA:CDGMGDV
PhylomeDB:P15918 GenomeRNAi:5896 NextBio:22934 ArrayExpress:P15918
Bgee:P15918 CleanEx:HS_RAG1 Genevestigator:P15918
GermOnline:ENSG00000166349 Uniprot:P15918
Length = 1043
Score = 126 (49.4 bits), Expect = 0.00025, P = 0.00025
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREIL 78
C IC L D + T+C H FC CI + V G +YCP D+ + +L
Sbjct: 293 CQICEHILADPVETNCKHVFCRVCILRCLKVMG-SYCPSCRYPCFPTDLESPVKSFLSVL 351
Query: 79 ENNLT-CPYKQCSSQLSIPEYESHVNT 104
+ + CP K+C+ ++S+ +Y H+++
Sbjct: 352 NSLMVKCPAKECNEEVSLEKYNHHISS 378
>DICTYBASE|DDB_G0290883 [details] [associations]
symbol:DDB_G0290883 "TRAF-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR002083 InterPro:IPR008974 Pfam:PF00917 PROSITE:PS50089
PROSITE:PS50144 PROSITE:PS50145 SMART:SM00061 SMART:SM00184
dictyBase:DDB_G0290883 Prosite:PS00518 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF49599
eggNOG:NOG321306 ProtClustDB:CLSZ2429617 EMBL:AAFI02000171
RefSeq:XP_635511.1 ProteinModelPortal:Q54FG0
EnsemblProtists:DDB0238325 GeneID:8627878 KEGG:ddi:DDB_G0290883
OMA:HISECEN Uniprot:Q54FG0
Length = 460
Score = 87 (35.7 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 30/135 (22%), Positives = 57/135 (42%)
Query: 82 LTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSV---EDITDSPTSS-FRNTSGIPTNKRN 137
+TC +K C L + ESH N C K +DI + ++ +P +
Sbjct: 151 VTCSFKGCEKILRMNSLESHQNECGFKLVICDFCKRDDIKKKELETHYKTCPMVPIDCSQ 210
Query: 138 S---KILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD-LKTSFHLEL 193
KI ++ +H+ N PCK+++ GC+ K ++ L+ H + + ++ +
Sbjct: 211 GCSVKIERKSII-DHIE-NDCCNTQIPCKYFEQGCKVEMK-RSELQNHLERVNHQTYMGI 267
Query: 194 LFNKYCSDGSQSTNT 208
L +K + S T
Sbjct: 268 LIDKLTNQVGHSKKT 282
Score = 60 (26.2 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 395 EFSITDEIQSDKNFDSFKRPVNF-FLNKKAFGFNNFIRVADVLDPGRGFLMEDDTFVIKT 453
E+S T DK+ KR F++ K +G+ F+ ++D+++ G+L DD I+
Sbjct: 388 EYSFTLVNVLDKSKSITKRVDKIVFISPKEWGWGKFL-LSDLINKENGWLSNDDKLTIEI 446
Query: 454 QV 455
+
Sbjct: 447 YI 448
Score = 58 (25.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 16 RFECSICLEYLKDAILTSC--GHKFCAACIDSWIDVK 50
++ C IC E++ + C GH C C + ++ K
Sbjct: 24 KYTCPICFEFIYKKQIYQCKSGHHACKECWEKSLETK 60
>TAIR|locus:2095833 [details] [associations]
symbol:AT3G58030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 HOGENOM:HOG000090666
ProtClustDB:CLSN2683808 EMBL:AY081289 EMBL:BT006585 IPI:IPI00546255
RefSeq:NP_001190122.1 RefSeq:NP_191362.2 RefSeq:NP_974453.1
RefSeq:NP_974454.1 UniGene:At.34773 ProteinModelPortal:Q8RXF2
SMR:Q8RXF2 EnsemblPlants:AT3G58030.1 EnsemblPlants:AT3G58030.2
EnsemblPlants:AT3G58030.3 EnsemblPlants:AT3G58030.4 GeneID:824972
KEGG:ath:AT3G58030 TAIR:At3g58030 eggNOG:NOG244906
InParanoid:Q8RXF2 OMA:HARRIES PhylomeDB:Q8RXF2
Genevestigator:Q8RXF2 Uniprot:Q8RXF2
Length = 436
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 17 FECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDE-KVLTKD--DIFIDNYT 73
F+C+ICL+ K+ +LT CGH +C C+ W+ + CP+ + +V +K I+
Sbjct: 137 FDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKECPVCKGEVTSKTVTPIYGRGNH 196
Query: 74 RREILEN 80
+REI E+
Sbjct: 197 KREIEES 203
>ZFIN|ZDB-GENE-091113-36 [details] [associations]
symbol:trim35-10 "tripartite motif containing 35-10"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-091113-36 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU855801 IPI:IPI00627161 ProteinModelPortal:F1Q6F7
Ensembl:ENSDART00000142691 Uniprot:F1Q6F7
Length = 461
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 25/80 (31%), Positives = 37/80 (46%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
+L F C +C E KD + SC H FC C+ + CP+ + ++DD I N
Sbjct: 10 SLSDDFSCPVCCEIFKDPVFLSCSHSFCKKCLQQYWSTTETEECPVCRRKSSRDDPPI-N 68
Query: 72 YTRREILENNLTCPYKQCSS 91
R + E L ++CSS
Sbjct: 69 LVLRNLCELFLKEKNERCSS 88
>ZFIN|ZDB-GENE-080402-4 [details] [associations]
symbol:btr22 "bloodthirsty-related gene family,
member 22" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-080402-4 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862
GeneTree:ENSGT00660000095328 EMBL:CT030005 IPI:IPI00632223
Ensembl:ENSDART00000135762 Bgee:F6NQA8 Uniprot:F6NQA8
Length = 551
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLT-KDDIFID 70
L +CSICLE D + T CGH FC +C++ W + K + CP ++ T + D+ I
Sbjct: 28 LSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSKTCS-CPNCKETFTQRPDLKI- 85
Query: 71 NYTRREILEN 80
N T REI E+
Sbjct: 86 NTTLREISEH 95
>UNIPROTKB|E7EN90 [details] [associations]
symbol:BRCA1 "Breast cancer type 1 susceptibility protein"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0007098
"centrosome cycle" evidence=IEA] [GO:0009048 "dosage compensation
by inactivation of X chromosome" evidence=IEA] [GO:0035067
"negative regulation of histone acetylation" evidence=IEA]
[GO:0043009 "chordate embryonic development" evidence=IEA]
[GO:0044030 "regulation of DNA methylation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0051572 "negative regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0051573 "negative regulation of histone H3-K9
methylation" evidence=IEA] [GO:0051574 "positive regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0070512 "positive
regulation of histone H4-K20 methylation" evidence=IEA] [GO:2000617
"positive regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:2000620 "positive regulation of histone H4-K16 acetylation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR011364 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0007420 GO:GO:0032355 GO:GO:0005759
GO:GO:0046872 GO:GO:0003684 GO:GO:0006260 GO:GO:0008270
GO:GO:0006281 GO:GO:0007584 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000794 InterPro:IPR017907 PANTHER:PTHR13763 EMBL:AC060780
EMBL:AC135721 HGNC:HGNC:1100 ChiTaRS:BRCA1 GO:GO:0043009
GO:GO:0009048 GO:GO:0007098 IPI:IPI00945744 SMR:E7EN90
Ensembl:ENST00000461221 Ensembl:ENST00000461798 Uniprot:E7EN90
Length = 63
Score = 98 (39.6 bits), Expect = 0.00030, P = 0.00030
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 9 NKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPI 57
N +N + EC ICLE +K+ + T C H FC C+ ++ K G + CP+
Sbjct: 13 NVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPL 63
>MGI|MGI:1929069 [details] [associations]
symbol:Rnf8 "ring finger protein 8" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IMP] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=ISO] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO;IDA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0010212 "response
to ionizing radiation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0033522 "histone H2A ubiquitination" evidence=ISO;IMP]
[GO:0033523 "histone H2B ubiquitination" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO;IMP] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0045190 "isotype switching" evidence=IMP]
[GO:0045739 "positive regulation of DNA repair" evidence=ISO]
[GO:0045900 "negative regulation of translational elongation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=ISO] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISO] [GO:0070535 "histone H2A K63-linked
ubiquitination" evidence=ISO] [GO:0070936 "protein K48-linked
ubiquitination" evidence=ISO] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 InterPro:IPR017335 Pfam:PF00498
PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184
SMART:SM00240 UniPathway:UPA00143 MGI:MGI:1929069 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007067
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
Gene3D:2.60.200.20 SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043486 GO:GO:0045190
GO:GO:0004842 GO:GO:0030496 GO:GO:0042393 GO:GO:0045739
GO:GO:0000151 InterPro:IPR017907 GO:GO:0070936 GO:GO:0000781
GO:GO:0006303 GO:GO:0033523 GO:GO:0045900 GO:GO:0035861
GermOnline:ENSMUSG00000024019 GO:GO:0070535 HOVERGEN:HBG023954
KO:K10667 CTD:9025 GeneTree:ENSGT00400000022349
HOGENOM:HOG000154169 PANTHER:PTHR15067:SF3 EMBL:AK076180
EMBL:AK147168 EMBL:CT010295 EMBL:BC021778 EMBL:AJ242721
IPI:IPI00551150 RefSeq:NP_067394.1 UniGene:Mm.305994
ProteinModelPortal:Q8VC56 SMR:Q8VC56 DIP:DIP-59448N
PhosphoSite:Q8VC56 PRIDE:Q8VC56 Ensembl:ENSMUST00000024817
GeneID:58230 KEGG:mmu:58230 UCSC:uc008btf.1 NextBio:314253
Bgee:Q8VC56 CleanEx:MM_RNF8 Genevestigator:Q8VC56 Uniprot:Q8VC56
Length = 488
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 27/83 (32%), Positives = 44/83 (53%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTK--DDIFID 70
L+ +C IC EY +A+ +C H FC+ CI+ W+ K K CPI K + + + +D
Sbjct: 400 LENELQCIICSEYFIEAVTLNCAHSFCSFCINEWM--KRKVECPICRKDIESRTNSLVLD 457
Query: 71 NYTRREILENNLTCPYKQCSSQL 93
N + + +NL+ K+ S L
Sbjct: 458 NCISKMV--DNLSSDVKERRSVL 478
>ZFIN|ZDB-GENE-060810-140 [details] [associations]
symbol:trim105 "tripartite motif containing 105"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060810-140 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104222 OMA:VEPMRIC EMBL:CR627495
IPI:IPI00993660 Ensembl:ENSDART00000080247 ArrayExpress:F1QCZ4
Bgee:F1QCZ4 Uniprot:F1QCZ4
Length = 426
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 35/111 (31%), Positives = 50/111 (45%)
Query: 7 ANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLTKD 65
+ +K +L C+IC E K+ ++ C H FC CI S W V+ CP +
Sbjct: 4 SKSKTSLREDLTCAICFELFKEPVMLGCMHHFCRRCIVSYWKSVRSPVTCPQCRQEFPNK 63
Query: 66 DIFIDNYTRREILENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSVED 116
F NY L NL + SS S+ E +N C L+ SQ S++D
Sbjct: 64 CCFQTNY-----LVANLVEKVRASSSPASVKYLEKELNDC-LE-SQCSMKD 107
>ZFIN|ZDB-GENE-070912-105 [details] [associations]
symbol:si:ch211-150h8.3 "si:ch211-150h8.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070912-105
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR006574 SMART:SM00589 GeneTree:ENSGT00670000097622
HOVERGEN:HBG106862 EMBL:BX323812 IPI:IPI00774747
Ensembl:ENSDART00000109246 OMA:ENICSSH Uniprot:B0S649
Length = 505
Score = 121 (47.7 bits), Expect = 0.00033, P = 0.00033
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 6 VANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWI--DVKGKNYCPIDEKVL 62
+A + L+L F C++CL+ LKD + CGH +C +CI D W D K CP +
Sbjct: 1 MAESSLSLAHHFSCAVCLDLLKDPVSIPCGHSYCMSCITDCWNQEDQKRVYSCPQCRQTF 60
Query: 63 TKDDIFIDNYTRREILE 79
+ N E+LE
Sbjct: 61 SPRPALAKNTMLAEVLE 77
>RGD|1359126 [details] [associations]
symbol:Trim26 "tripartite motif-containing 26" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 RGD:1359126 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:BX883051 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00690000101808 CTD:7726 eggNOG:NOG291505 KO:K12008
IPI:IPI00422036 RefSeq:NP_001011665.1 UniGene:Rn.163420
ProteinModelPortal:P62603 STRING:P62603 Ensembl:ENSRNOT00000001019
GeneID:309586 KEGG:rno:309586 UCSC:RGD:1359126 NextBio:661018
ArrayExpress:P62603 Genevestigator:P62603
GermOnline:ENSRNOG00000032930 Uniprot:P62603
Length = 542
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C + G CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENI 65
>FB|FBgn0035233 [details] [associations]
symbol:Pex10 "Peroxin 10" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048137
"spermatocyte division" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0007285 "primary spermatocyte
growth" evidence=IMP] [GO:0007112 "male meiosis cytokinesis"
evidence=IMP] InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089
SMART:SM00184 InterPro:IPR006845 Prosite:PS00518 EMBL:AE014296
GO:GO:0007286 GO:GO:0046872 GO:GO:0008270 GO:GO:0005779
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558 GO:GO:0007112
InterPro:IPR017907 GO:GO:0048137 GO:GO:0007285 eggNOG:COG5574
KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350 Pfam:PF04757 CTD:5192
GeneTree:ENSGT00510000048446 EMBL:AY069290 RefSeq:NP_647624.1
UniGene:Dm.2194 SMR:Q9W0D7 IntAct:Q9W0D7 MINT:MINT-1647351
EnsemblMetazoa:FBtr0072743 EnsemblMetazoa:FBtr0333397 GeneID:38182
KEGG:dme:Dmel_CG7864 UCSC:CG7864-RA FlyBase:FBgn0035233
InParanoid:Q9W0D7 OrthoDB:EOG4ZS7K2 GenomeRNAi:38182 NextBio:807389
Uniprot:Q9W0D7
Length = 299
Score = 117 (46.2 bits), Expect = 0.00037, P = 0.00037
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 12 NLDPRF-ECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDD-IFI 69
++DP +C +CLE D+ LT CGH FC +C+ W++ + + CP+ + L K I +
Sbjct: 238 DVDPNTPQCILCLEPRSDSSLTPCGHIFCWSCLLEWLEERDE--CPLCRESLKKSQVILL 295
Query: 70 DNY 72
NY
Sbjct: 296 QNY 298
>MGI|MGI:1337056 [details] [associations]
symbol:Trim26 "tripartite motif-containing 26" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 MGI:MGI:1337056 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
EMBL:CH466559 HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00690000101808 CTD:7726 eggNOG:NOG291505 KO:K12008
EMBL:AF230395 EMBL:AF230396 EMBL:CR956641 EMBL:BC037110
EMBL:AK042252 IPI:IPI00170374 IPI:IPI00454186 RefSeq:NP_001020770.2
UniGene:Mm.34587 ProteinModelPortal:Q99PN3 SMR:Q99PN3 STRING:Q99PN3
PhosphoSite:Q99PN3 PRIDE:Q99PN3 Ensembl:ENSMUST00000053434
Ensembl:ENSMUST00000123715 Ensembl:ENSMUST00000130367 GeneID:22670
KEGG:mmu:22670 InParanoid:Q99PN3 NextBio:303085 Bgee:Q99PN3
CleanEx:MM_TRIM26 Genevestigator:Q99PN3
GermOnline:ENSMUSG00000024457 Uniprot:Q99PN3
Length = 545
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C + G CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENI 65
>UNIPROTKB|G3X823 [details] [associations]
symbol:TRIM26 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101808 OMA:YEDWETD EMBL:DAAA02055411
Ensembl:ENSBTAT00000050226 Uniprot:G3X823
Length = 546
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C + G + CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDIRSISGGRPVCPLCKKPFKKENI 65
>UNIPROTKB|F1RWB5 [details] [associations]
symbol:F1RWB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104307 EMBL:FP067415
Ensembl:ENSSSCT00000009701 OMA:MEEVANQ Uniprot:F1RWB5
Length = 341
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCPI 57
L C ICL+YL+D + T CGH FC +C+ W ++G CP+
Sbjct: 10 LQAEASCPICLDYLRDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPV 55
>MGI|MGI:102749 [details] [associations]
symbol:Trim25 "tripartite motif-containing 25" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 MGI:MGI:102749 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0030054 GO:GO:0008270
GO:GO:0045087 GO:GO:0051607 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:AL646096 CTD:7706
eggNOG:NOG253760 HOVERGEN:HBG101063 KO:K10652 OMA:SHINGAT
OrthoDB:EOG42JNRQ EMBL:D63902 EMBL:AK169562 IPI:IPI00122289
PIR:I49642 RefSeq:NP_033572.2 UniGene:Mm.248445
ProteinModelPortal:Q61510 SMR:Q61510 MINT:MINT-240797 STRING:Q61510
PhosphoSite:Q61510 PaxDb:Q61510 PRIDE:Q61510
Ensembl:ENSMUST00000107896 GeneID:217069 KEGG:mmu:217069
GeneTree:ENSGT00700000104271 HOGENOM:HOG000132974 InParanoid:Q5SU70
NextBio:375545 Bgee:Q61510 CleanEx:MM_TRIM25 Genevestigator:Q61510
GermOnline:ENSMUSG00000000275 Uniprot:Q61510
Length = 634
Score = 125 (49.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 10 KLN-LDPRFECSICLEYLKDAILTSCGHKFCAACID-SWIDVKGKNY-CPIDEKV 61
+LN L CS+CLE K+ + T CGH FC +C+D +W+ V+G Y CP KV
Sbjct: 3 ELNPLAEELSCSVCLELFKEPVTTPCGHNFCMSCLDETWV-VQGPPYRCPQCRKV 56
Score = 41 (19.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 27/113 (23%), Positives = 45/113 (39%)
Query: 111 QPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFP-CKFYQ--- 166
QPS + I + T G P++ +K+ T + L+ + +S + P Q
Sbjct: 379 QPSKKTIQEKKTKKTPVAPGPPSHFSPNKLPTFGAPGQSLDSKATSPDAAPKASAAQPDS 438
Query: 167 VGCR----EVFKSQALLEK-HYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQ 214
VG + E F +++ E Y +K F NK +T + S G Q
Sbjct: 439 VGVKAKVLENFLTKSRTELLEYFVKVIFDYNTAHNKVSLSNKYTTASVSDGLQ 491
>MGI|MGI:97848 [details] [associations]
symbol:Rag1 "recombination activating gene 1" species:10090
"Mus musculus" [GO:0002250 "adaptive immune response" evidence=IMP]
[GO:0002331 "pre-B cell allelic exclusion" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0010390 "histone monoubiquitination" evidence=IDA] [GO:0016265
"death" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016788 "hydrolase activity, acting on ester bonds"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016881 "acid-amino acid ligase activity" evidence=IEA]
[GO:0030183 "B cell differentiation" evidence=IDA;IMP] [GO:0033077
"T cell differentiation in thymus" evidence=IMP] [GO:0033151 "V(D)J
recombination" evidence=IGI;IMP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043029 "T cell homeostasis" evidence=IGI]
[GO:0043154 "negative regulation of cysteine-type endopeptidase
activity involved in apoptotic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0045580
"regulation of T cell differentiation" evidence=IGI] [GO:0046872
"metal ion binding" evidence=IMP] [GO:0048538 "thymus development"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0070233 "negative regulation of T cell apoptotic
process" evidence=IGI] [GO:0070244 "negative regulation of
thymocyte apoptotic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR019485
InterPro:IPR024627 Pfam:PF10426 Pfam:PF12940 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 MGI:MGI:97848 Prosite:PS00518
GO:GO:0005634 GO:GO:0043154 GO:GO:0042803 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH466519 Gene3D:3.30.160.60
GO:GO:0033077 GO:GO:0070244 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004519 GO:GO:0004842 GO:GO:0042393 InterPro:IPR017907
GO:GO:0051865 GO:GO:0002331 GO:GO:0010390 EMBL:AL929569
GO:GO:0033151 CTD:5896 eggNOG:NOG45367 HOGENOM:HOG000232009
HOVERGEN:HBG003861 KO:K10628 OrthoDB:EOG4PRSPZ InterPro:IPR023336
PANTHER:PTHR11539 PROSITE:PS51487 OMA:CDGMGDV EMBL:M29475
EMBL:BC138342 IPI:IPI00135954 PIR:B33754 RefSeq:NP_033045.2
UniGene:Mm.828 PDB:1RMD PDB:3GNA PDB:3GNB PDBsum:1RMD PDBsum:3GNA
PDBsum:3GNB ProteinModelPortal:P15919 SMR:P15919 DIP:DIP-48518N
STRING:P15919 PhosphoSite:P15919 PaxDb:P15919 PRIDE:P15919
Ensembl:ENSMUST00000078494 GeneID:19373 KEGG:mmu:19373
GeneTree:ENSGT00390000008679 InParanoid:A2AVN8
EvolutionaryTrace:P15919 NextBio:296463 Bgee:P15919 CleanEx:MM_RAG1
Genevestigator:P15919 Uniprot:P15919
Length = 1040
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREIL 78
C IC L D + TSC H FC CI + V G +YCP D+ + IL
Sbjct: 290 CQICEHILADPVETSCKHLFCRICILRCLKVMG-SYCPSCRYPCFPTDLESPVKSFLNIL 348
Query: 79 ENNLT-CPYKQCSSQLSIPEYESHVNT 104
+ + CP + C+ ++S+ +Y HV++
Sbjct: 349 NSLMVKCPAQDCNEEVSLEKYNHHVSS 375
>UNIPROTKB|F1RVS2 [details] [associations]
symbol:LOC100153408 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 EMBL:CU467025 ProteinModelPortal:F1RVS2
Ensembl:ENSSSCT00000001757 ArrayExpress:F1RVS2 Uniprot:F1RVS2
Length = 487
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK-VLTKD-DIFID 70
L+ +C IC EY +A+ +C H FC+ CI+ W+ K K CPI K + +K + +D
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKVECPICRKDIKSKTHSLVLD 456
Query: 71 NYTRREILENNLTCPYKQ 88
N + + +NL+ K+
Sbjct: 457 NCINKMV--DNLSSEVKE 472
>UNIPROTKB|I3L6W2 [details] [associations]
symbol:LOC100153408 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0051301 "cell division" evidence=IEA] [GO:0016881
"acid-amino acid ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
Prosite:PS00518 GO:GO:0005634 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006974 GO:GO:0016567 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
InterPro:IPR017907 GeneTree:ENSGT00400000022349 OMA:EVTEEDW
PANTHER:PTHR15067:SF3 EMBL:CU467025 Ensembl:ENSSSCT00000028776
Uniprot:I3L6W2
Length = 488
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK-VLTKD-DIFID 70
L+ +C IC EY +A+ +C H FC+ CI+ W+ K K CPI K + +K + +D
Sbjct: 399 LENELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKVECPICRKDIKSKTHSLVLD 456
Query: 71 NYTRREILENNLTCPYKQ 88
N + + +NL+ K+
Sbjct: 457 NCINKMV--DNLSSEVKE 472
>ZFIN|ZDB-GENE-070705-22 [details] [associations]
symbol:si:ch211-121a2.3 "si:ch211-121a2.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070705-22 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 EMBL:BX511260
GeneTree:ENSGT00670000097622 IPI:IPI00855283
Ensembl:ENSDART00000043248 Uniprot:F1Q4M8
Length = 562
Score = 98 (39.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 16 RFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDE 59
+F C IC++ L+D + CGH +C CI S W + C E
Sbjct: 14 QFSCPICMDLLRDPVTIPCGHNYCMECIKSFWEQKSQRKLCSCPE 58
Score = 68 (29.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 36/164 (21%), Positives = 60/164 (36%)
Query: 75 REILENNLTCPYKQCSSQLSIPEYESHVNTCY--LKYSQPSVEDITDSPTSSFRNTSGIP 132
+++ + L K+ + IP E V + KYS P D+ ++ +N P
Sbjct: 350 KDLCQKKLVKLSKKVTRLKFIPTPEPKVREQFWEYKYSGPLTLDLN----TAHKNLIICP 405
Query: 133 TNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYDLKTSFHLE 192
N + + T P+H E F +YQV CRE + E + K H+
Sbjct: 406 DNVQATFSKTYLSVPDH-------PERFD-GYYQVLCRESVSGRCYFETEWSGKGPVHIA 457
Query: 193 LLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKL 236
+ + G S H Q S +Y + E+K+
Sbjct: 458 VSYEDISRKGKSSQCAFGHNAQSWSLVCSDGSYAFWHNGRETKI 501
>RGD|1303139 [details] [associations]
symbol:Rnf114 "ring finger protein 114" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 RGD:1303139 Prosite:PS00518
Pfam:PF05605 GO:GO:0007275 GO:GO:0030154 GO:GO:0046872
GO:GO:0008270 GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR008598 CTD:55905
eggNOG:NOG145063 GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OrthoDB:EOG4CVG7Q EMBL:AY603473
EMBL:BC098633 IPI:IPI00421945 RefSeq:NP_001001517.1
UniGene:Rn.49925 ProteinModelPortal:Q6J2U6 PRIDE:Q6J2U6
Ensembl:ENSRNOT00000012675 GeneID:362277 KEGG:rno:362277
UCSC:RGD:1303139 InParanoid:Q6J2U6 NextBio:679307
ArrayExpress:Q6J2U6 Genevestigator:Q6J2U6
GermOnline:ENSRNOG00000009525 Uniprot:Q6J2U6
Length = 229
Score = 114 (45.2 bits), Expect = 0.00042, P = 0.00041
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 14 DP--RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
DP RF C +CLE + + CGH FC+AC+ + K K C + L +
Sbjct: 23 DPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPK-KPVCGVCRSALAPGVRAAE- 80
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDITDSPTSSFRN 127
R+I +C C + + +HV +C Y Y V+ T + RN
Sbjct: 81 -LERQIESIETSC--HGCRKDFVLSKIRAHVASCSKYQSYIMEGVKATTKDASLQQRN 135
>UNIPROTKB|Q6J2U6 [details] [associations]
symbol:Rnf114 "RING finger protein 114" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184
SMART:SM00355 RGD:1303139 Prosite:PS00518 Pfam:PF05605
GO:GO:0007275 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
GO:GO:0007283 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR008598 CTD:55905 eggNOG:NOG145063
GeneTree:ENSGT00530000063064 HOGENOM:HOG000230946
HOVERGEN:HBG074331 KO:K15697 OrthoDB:EOG4CVG7Q EMBL:AY603473
EMBL:BC098633 IPI:IPI00421945 RefSeq:NP_001001517.1
UniGene:Rn.49925 ProteinModelPortal:Q6J2U6 PRIDE:Q6J2U6
Ensembl:ENSRNOT00000012675 GeneID:362277 KEGG:rno:362277
UCSC:RGD:1303139 InParanoid:Q6J2U6 NextBio:679307
ArrayExpress:Q6J2U6 Genevestigator:Q6J2U6
GermOnline:ENSRNOG00000009525 Uniprot:Q6J2U6
Length = 229
Score = 114 (45.2 bits), Expect = 0.00042, P = 0.00041
Identities = 32/118 (27%), Positives = 48/118 (40%)
Query: 14 DP--RFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDN 71
DP RF C +CLE + + CGH FC+AC+ + K K C + L +
Sbjct: 23 DPLSRFTCPVCLEVFEKPVQVPCGHVFCSACLQECLKPK-KPVCGVCRSALAPGVRAAE- 80
Query: 72 YTRREILENNLTCPYKQCSSQLSIPEYESHVNTC--YLKYSQPSVEDITDSPTSSFRN 127
R+I +C C + + +HV +C Y Y V+ T + RN
Sbjct: 81 -LERQIESIETSC--HGCRKDFVLSKIRAHVASCSKYQSYIMEGVKATTKDASLQQRN 135
>UNIPROTKB|E2QTS9 [details] [associations]
symbol:TRIM26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
Ensembl:ENSCAFT00000019412 Uniprot:E2QTS9
Length = 492
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKG-KNYCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC C V G + CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRGCTTDVRPVSGGRPVCPLCKKPFKKENI 65
>UNIPROTKB|I3L768 [details] [associations]
symbol:LOC100624129 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 PANTHER:PTHR23350 Pfam:PF04757
GeneTree:ENSGT00510000048446 OMA:AGWASKK EMBL:FP565908
RefSeq:XP_003356175.1 Ensembl:ENSSSCT00000032291 GeneID:100624129
KEGG:ssc:100624129 Uniprot:I3L768
Length = 326
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 3 HQPVANNKLNLDPRFE-----CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI 57
H+ +++ + ++D R C++CLE + A T CGH FC CI W D K + CP+
Sbjct: 252 HRGLSHRRSHVDERVVSTASLCTLCLEERRHATATPCGHLFCWECITHWSDTKAE--CPL 309
Query: 58 -DEKVLTKDDIFIDNY 72
EK L + +++ +Y
Sbjct: 310 CREKFLPQKLVYLRHY 325
>UNIPROTKB|I3LSN3 [details] [associations]
symbol:LOC100736805 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005779 "integral to peroxisomal membrane" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350
Pfam:PF04757 GeneTree:ENSGT00510000048446 EMBL:FP565395
RefSeq:XP_003481979.1 Ensembl:ENSSSCT00000027142 GeneID:100736805
KEGG:ssc:100736805 Uniprot:I3LSN3
Length = 326
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 3 HQPVANNKLNLDPRFE-----CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI 57
H+ +++ + ++D R C++CLE + A T CGH FC CI W D K + CP+
Sbjct: 252 HRGLSHRRSHVDERVVSTASLCTLCLEERRHATATPCGHLFCWECITHWSDTKAE--CPL 309
Query: 58 -DEKVLTKDDIFIDNY 72
EK L + +++ +Y
Sbjct: 310 CREKFLPQKLVYLRHY 325
>ZFIN|ZDB-GENE-060825-109 [details] [associations]
symbol:btr04 "bloodthirsty-related gene family,
member 4" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-060825-109 GO:GO:0046872
GO:GO:0008270 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030144 IPI:IPI00486847
RefSeq:XP_003198956.1 UniGene:Dr.30113 Ensembl:ENSDART00000138523
GeneID:565512 KEGG:dre:565512 CTD:565512 NextBio:20885923
Bgee:F1Q9T2 Uniprot:F1Q9T2
Length = 440
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 4 QPVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNY-CPIDEKVL 62
Q +++++ L +CS+CL+ D + T CGH FC +C++ D K +N CPI +
Sbjct: 24 QSLSSSQGPLFEELQCSVCLDVFTDPVSTPCGHNFCKSCLNECWD-KSQNCNCPICSETF 82
Query: 63 TKDDIFIDNYTRREILE 79
+K N T R++++
Sbjct: 83 SKRPKLKINTTLRQVVQ 99
>UNIPROTKB|E7ETR2 [details] [associations]
symbol:BRCA1 "Breast cancer 1, early onset, isoform CRA_d"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR011364 PIRSF:PIRSF001734
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00533
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0006281 Gene3D:3.30.40.10
InterPro:IPR013083 SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172
InterPro:IPR017907 PANTHER:PTHR13763 CTD:672 KO:K10605
EMBL:AC060780 EMBL:AC135721 IPI:IPI00027277 RefSeq:NP_009229.2
UniGene:Hs.194143 GeneID:672 KEGG:hsa:672 HGNC:HGNC:1100
ChiTaRS:BRCA1 GenomeRNAi:672 SMR:E7ETR2 Ensembl:ENST00000491747
Uniprot:E7ETR2
Length = 759
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 60/224 (26%), Positives = 97/224 (43%)
Query: 9 NKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVK-GKNYCPIDEKVLTKDD 66
N +N + EC ICLE +K+ + T C H FC C+ ++ K G + CP+ + +TK
Sbjct: 13 NVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72
Query: 67 IFIDNYTR-REILENNLTCPYKQCSSQLSIP-EYESHVNTCYLKYSQPSVEDITDSPTSS 124
+ TR +++E L C+ QL EY + N + K S E + D S
Sbjct: 73 L--QESTRFSQLVEELLKII---CAFQLDTGLEYANSYN--FAKKENNSPEHLKDEV--S 123
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHLNMQGSSNENFPCKFYQVGCREVFKSQALLEKHYD 184
+ G R ++L PE+ ++Q +S + +G +++ ++
Sbjct: 124 IIQSMGY--RNRAKRLLQSE--PENPSLQETS---LSVQLSNLGTVRTLRTKQRIQPQ-- 174
Query: 185 LKTSFHLEL-------LFNK--YCSDGSQSTN--TPSHGRQDTS 217
KTS ++EL NK YCS G Q TP R + S
Sbjct: 175 -KTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEIS 217
>ZFIN|ZDB-GENE-020620-2 [details] [associations]
symbol:bty "bloodthirsty" species:7955 "Danio rerio"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-020620-2
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0030218 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 HOVERGEN:HBG106862 IPI:IPI00962937
EMBL:AY454307 RefSeq:NP_001018311.1 UniGene:Dr.23709
ProteinModelPortal:Q5DSV6 PRIDE:Q5DSV6 GeneID:246711
KEGG:dre:246711 CTD:246711 NextBio:20797216 Uniprot:Q5DSV6
Length = 532
Score = 120 (47.3 bits), Expect = 0.00047, P = 0.00047
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLT-KDDIFID 70
L +CSICLE D + T CGH FC +C++ W + + + CP ++ T + D+ I
Sbjct: 8 LSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCS-CPYCKETFTQRPDLKI- 65
Query: 71 NYTRREILEN 80
N T REI E+
Sbjct: 66 NTTLREISEH 75
>ZFIN|ZDB-GENE-070705-379 [details] [associations]
symbol:btr27 "bloodthirsty-related gene family,
member 27" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-070705-379 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
eggNOG:NOG252602 OrthoDB:EOG4BVRTF HOVERGEN:HBG106862 EMBL:CR853286
IPI:IPI00962937 Ensembl:ENSDART00000132370
GeneTree:ENSGT00660000095328 Uniprot:A5WUZ3
Length = 549
Score = 116 (45.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 5 PVANNKLN-LDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVL 62
P ++ N L +CSICLE D + T CGH FC +C++ W + + + CP ++
Sbjct: 24 PYMSSSSNPLSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCS-CPYCKETF 82
Query: 63 T-KDDIFIDNYTRREILEN 80
+ D+ I N T REI E+
Sbjct: 83 RHRPDLKI-NTTLREISEH 100
Score = 48 (22.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 345 GYRFCTRVNISREDAQYLSLFIHLVQGENDDILDWPFVGRIRFTALNTSSE-FSITDEIQ 403
G FCT V + +E+ + SL + + +D+ G + F + +SS +S TD+
Sbjct: 462 GNGFCT-VWLRKEN-ECFSLSLKVKPQRVGVFVDYE-EGLVSFYDVESSSHIYSFTDQTF 518
Query: 404 SDKNFDSFKRPVNF 417
+DK + F N+
Sbjct: 519 TDKLYPYFSPCPNY 532
>UNIPROTKB|Q12899 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872
"metal ion binding" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357 EMBL:AL844220 EMBL:BX927221
EMBL:CR759838 EMBL:CR788282 EMBL:BX248419 EMBL:U09825 EMBL:AB088090
EMBL:AB202086 EMBL:AB103596 EMBL:CR388382 EMBL:BX927189
EMBL:BC024039 EMBL:BC032297 IPI:IPI00010948 RefSeq:NP_001229712.1
RefSeq:NP_003440.1 UniGene:Hs.720054 UniGene:Hs.731863
ProteinModelPortal:Q12899 SMR:Q12899 DIP:DIP-52853N IntAct:Q12899
STRING:Q12899 PhosphoSite:Q12899 DMDM:17380344 PRIDE:Q12899
DNASU:7726 Ensembl:ENST00000327357 Ensembl:ENST00000383607
Ensembl:ENST00000396558 Ensembl:ENST00000415923
Ensembl:ENST00000422349 Ensembl:ENST00000425523
Ensembl:ENST00000425831 Ensembl:ENST00000427535
Ensembl:ENST00000428486 Ensembl:ENST00000432326
Ensembl:ENST00000433314 Ensembl:ENST00000436219
Ensembl:ENST00000437089 Ensembl:ENST00000438384
Ensembl:ENST00000438908 Ensembl:ENST00000439094
Ensembl:ENST00000445259 Ensembl:ENST00000447711
Ensembl:ENST00000450392 Ensembl:ENST00000453195
Ensembl:ENST00000454678 Ensembl:ENST00000455000
Ensembl:ENST00000456093 Ensembl:ENST00000456770 GeneID:7726
KEGG:hsa:7726 UCSC:uc003npr.3 CTD:7726 GeneCards:GC06M030152
HGNC:HGNC:12962 MIM:600830 neXtProt:NX_Q12899 PharmGKB:PA37544
eggNOG:NOG291505 InParanoid:Q12899 KO:K12008 OMA:YEDWETD
OrthoDB:EOG42821H PhylomeDB:Q12899 GenomeRNAi:7726 NextBio:29920
ArrayExpress:Q12899 Bgee:Q12899 CleanEx:HS_TRIM26
Genevestigator:Q12899 GermOnline:ENSG00000137313 Uniprot:Q12899
Length = 539
Score = 120 (47.3 bits), Expect = 0.00047, P = 0.00047
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 12 NLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKN-YCPIDEKVLTKDDI 67
+L+ CSICL+YL+D + CGH FC +C + G CP+ +K K++I
Sbjct: 9 SLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENI 65
>UNIPROTKB|Q7ZX20 [details] [associations]
symbol:rnf8-a "E3 ubiquitin-protein ligase RNF8-A"
species:8355 "Xenopus laevis" [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0000781 "chromosome, telomeric region"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006302 "double-strand
break repair" evidence=ISS] [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0008270 "zinc
ion binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033522 "histone H2A ubiquitination"
evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043486 "histone exchange" evidence=ISS] [GO:0045190 "isotype
switching" evidence=ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISS] [GO:0045900 "negative regulation of
translational elongation" evidence=ISS] [GO:0070534 "protein
K63-linked ubiquitination" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 InterPro:IPR017335
Pfam:PF00498 PIRSF:PIRSF037950 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0042803 GO:GO:0051301 GO:GO:0007286
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043486 GO:GO:0045190 GO:GO:0004842
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 EMBL:BC046256
RefSeq:NP_001080384.1 UniGene:Xl.75515 HSSP:O76064
ProteinModelPortal:Q7ZX20 SMR:Q7ZX20 PRIDE:Q7ZX20 GeneID:380076
KEGG:xla:380076 CTD:380076 Xenbase:XB-GENE-6254223
HOVERGEN:HBG023954 KO:K10667 Uniprot:Q7ZX20
Length = 540
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 9 NKLN--LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPI-DEKVLTKD 65
N +N LD +C IC E+ +A+ +C H FC+ CI SW K K CPI ++++T+
Sbjct: 370 NHMNDVLDNELQCIICSEHFIEAVTLNCAHSFCSYCIKSW--KKRKEECPICRQEIVTET 427
Query: 66 -DIFIDN 71
+ +DN
Sbjct: 428 RSLVLDN 434
>UNIPROTKB|E1C0T3 [details] [associations]
symbol:PDZRN3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0031594 "neuromuscular junction" evidence=IEA] Pfam:PF00595
InterPro:IPR001841 InterPro:IPR001478 InterPro:IPR008974
InterPro:IPR013010 InterPro:IPR013323 PROSITE:PS50089
PROSITE:PS50106 PROSITE:PS51081 SMART:SM00184 SMART:SM00228
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0031594
Gene3D:3.30.40.10 InterPro:IPR013083 SUPFAM:SSF50156 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K15682
GeneTree:ENSGT00510000046421 CTD:23024 OMA:IPVDECE
EMBL:AADN02014450 EMBL:AADN02014451 IPI:IPI00603818
RefSeq:XP_414432.2 UniGene:Gga.15903 ProteinModelPortal:E1C0T3
Ensembl:ENSGALT00000012692 GeneID:416099 KEGG:gga:416099
NextBio:20819608 Uniprot:E1C0T3
Length = 1060
Score = 132 (51.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNY 72
+DP F+C++C + L+D + T CGH FCA C+ W+ +G CP + + ++ ++
Sbjct: 12 VDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGS--CPANCQRISAKELNHVLP 69
Query: 73 TRREILENNLTCPY--KQCSSQLSIPEYESHVNTC 105
+ IL+ ++ C + C + + + H TC
Sbjct: 70 LKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETC 104
Score = 38 (18.4 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 238 DPNKNQAGDDKSSEGD 253
DPN A D + EGD
Sbjct: 452 DPNSIAAKDGRLREGD 467
Score = 37 (18.1 bits), Expect = 0.00061, Sum P(2) = 0.00060
Identities = 11/46 (23%), Positives = 20/46 (43%)
Query: 218 NQKEIEAYLMKNKEHESKLWDPNKNQAGDDKSSEGDCSCKTCGDNS 263
+QK + A ++ HES + + D S + +C + D S
Sbjct: 799 SQKNLFA---SSESHESSTGKCHSSAKDPDTSKQMECKERKASDGS 841
>MGI|MGI:2387430 [details] [associations]
symbol:Trim60 "tripartite motif-containing 60" species:10090
"Mus musculus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
MGI:MGI:2387430 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234133 HOVERGEN:HBG001357
GeneTree:ENSGT00700000104307 CTD:166655 eggNOG:NOG253525 KO:K12029
OrthoDB:EOG4NP73C EMBL:AF290197 EMBL:AY063497 EMBL:AK135841
IPI:IPI00128735 RefSeq:NP_694737.1 UniGene:Mm.28010
ProteinModelPortal:Q8VI40 SMR:Q8VI40 STRING:Q8VI40
PhosphoSite:Q8VI40 PRIDE:Q8VI40 Ensembl:ENSMUST00000048565
GeneID:234329 KEGG:mmu:234329 UCSC:uc009lve.2 InParanoid:Q8VI40
NextBio:382093 Bgee:Q8VI40 Genevestigator:Q8VI40
GermOnline:ENSMUSG00000053490 Uniprot:Q8VI40
Length = 466
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLTKDDIFIDNYTRREI 77
C IC ++++D + + CGH FC AC+ W D++G +CP+ + F NY R +
Sbjct: 15 CYICSDFMEDPVTSRCGHNFCFACLRLLWDDLQGNIFCPVCQTPFPPKS-FSRNYQFRNM 73
Query: 78 LENNLTCPYKQCSSQLSIPEYESHVNTCYLKYSQPSV 114
E +Q + E H C K+ QP V
Sbjct: 74 TETIRLLQKRQSKRK----RQEEHT-VCP-KHDQPLV 104
>ZFIN|ZDB-GENE-081031-80 [details] [associations]
symbol:btr21 "bloodthirsty-related gene family,
member 21" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081031-80 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 GeneTree:ENSGT00660000095328 EMBL:CT030005
IPI:IPI00608496 Ensembl:ENSDART00000131989 Uniprot:F6P534
Length = 563
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNY-CPIDEKVL 62
P++ K L +CS+CL+ D + T CGH FC +C++ W K NY CP ++
Sbjct: 22 PLSMAKGPLSEDLQCSVCLDVFTDPVSTPCGHNFCRSCLNKCWN--KSWNYSCPNCKETF 79
Query: 63 T-KDDIFIDNYTRREILEN 80
T + D+ I N + REI E+
Sbjct: 80 TQRPDLKI-NTSLREISEH 97
>UNIPROTKB|E2REB2 [details] [associations]
symbol:LNX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00595
InterPro:IPR001841 InterPro:IPR001478 PROSITE:PS50089
PROSITE:PS50106 SMART:SM00184 SMART:SM00228 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0051260 Gene3D:3.30.40.10
InterPro:IPR013083 SUPFAM:SSF50156 InterPro:IPR017907
GeneTree:ENSGT00650000092901 KO:K10692 CTD:222484 OMA:EKDFCPL
EMBL:AAEX03014243 RefSeq:XP_543157.1 ProteinModelPortal:E2REB2
Ensembl:ENSCAFT00000010916 GeneID:486031 KEGG:cfa:486031
NextBio:20859897 Uniprot:E2REB2
Length = 689
Score = 121 (47.7 bits), Expect = 0.00052, P = 0.00052
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
N + +D C ICL+ L + T CGH FC C+ +++ + K++CP+D K L
Sbjct: 39 NYQNEVDDDLVCHICLQPLLQPLDTPCGHTFCCKCLRNFL--QEKDFCPLDRKRLHFKLC 96
Query: 68 FIDNYTRREILENNLT-CPYKQ-CSSQLSIPEYESHV-NTC 105
+ ++L+ L CP+ C + + E+H+ N C
Sbjct: 97 KKSSILVHKLLDKLLVLCPFSSVCQDVMQRCDLEAHLKNRC 137
>UNIPROTKB|G3V6K9 [details] [associations]
symbol:Rag1 "Recombination activating gene 1" species:10116
"Rattus norvegicus" [GO:0002331 "pre-B cell allelic exclusion"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0033151 "V(D)J recombination" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0070244 "negative regulation of thymocyte
apoptotic process" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019485 InterPro:IPR024627 Pfam:PF10426 Pfam:PF12940
PROSITE:PS50089 SMART:SM00184 SMART:SM00355 Pfam:PF00097 RGD:619790
Prosite:PS00518 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.160.60 GO:GO:0016788 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016881 InterPro:IPR017907 EMBL:CH473949
GO:GO:0033151 CTD:5896 KO:K10628 InterPro:IPR023336
PANTHER:PTHR11539 PROSITE:PS51487 OMA:CDGMGDV
GeneTree:ENSGT00390000008679 RefSeq:NP_445920.1 UniGene:Rn.92344
ProteinModelPortal:G3V6K9 Ensembl:ENSRNOT00000006115 GeneID:84600
KEGG:rno:84600 NextBio:617237 Uniprot:G3V6K9
Length = 1040
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREIL 78
C IC L D + T+C H FC CI + V G +YCP D+ + IL
Sbjct: 290 CQICEHILADPVETTCKHLFCRICILRCLKVMG-SYCPSCRYPCFPTDLQSPVKSFLSIL 348
Query: 79 ENNLT-CPYKQCSSQLSIPEYESHVNT 104
+ + CP ++C+ ++S+ +Y HV++
Sbjct: 349 NSLMVKCPAQECNEEVSLEKYNHHVSS 375
>UNIPROTKB|F1MG60 [details] [associations]
symbol:RAG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070244 "negative regulation of thymocyte apoptotic
process" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0033151 "V(D)J
recombination" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0002331 "pre-B cell allelic exclusion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR019485
InterPro:IPR024627 Pfam:PF10426 Pfam:PF12940 PROSITE:PS50089
SMART:SM00184 SMART:SM00355 Pfam:PF00097 Prosite:PS00518
GO:GO:0005634 GO:GO:0043154 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:3.30.160.60 GO:GO:0033077 GO:GO:0070244
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004519 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 GO:GO:0002331 GO:GO:0010390
GO:GO:0033151 CTD:5896 KO:K10628 InterPro:IPR023336
PANTHER:PTHR11539 PROSITE:PS51487 OMA:CDGMGDV
GeneTree:ENSGT00390000008679 EMBL:DAAA02041329 IPI:IPI00705348
RefSeq:XP_002693567.1 RefSeq:XP_872414.1 ProteinModelPortal:F1MG60
PRIDE:F1MG60 Ensembl:ENSBTAT00000055549 GeneID:506302
KEGG:bta:506302 NextBio:20867547 Uniprot:F1MG60
Length = 1043
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00052
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDIFIDNYTRREIL 78
C IC L D + T+C H FC CI + V G +YCP + D+ + IL
Sbjct: 293 CQICEHILADPVETNCKHVFCRICILRCLKVLG-SYCPSCQYPCFPTDLESPVKSFLSIL 351
Query: 79 ENNLT-CPYKQCSSQLSIPEYESHVNT 104
+ + CP ++C ++S+ +Y HV++
Sbjct: 352 NSLMVKCPAEECDEEVSLEKYNHHVSS 378
>UNIPROTKB|Q2HJ46 [details] [associations]
symbol:RNF8 "E3 ubiquitin-protein ligase RNF8" species:9913
"Bos taurus" [GO:0045190 "isotype switching" evidence=ISS]
[GO:0033522 "histone H2A ubiquitination" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0070936 "protein
K48-linked ubiquitination" evidence=ISS] [GO:0045900 "negative
regulation of translational elongation" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0043486 "histone
exchange" evidence=ISS] [GO:0007286 "spermatid development"
evidence=ISS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISS] [GO:0070535 "histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0006974 "response to
DNA damage stimulus" evidence=ISS] [GO:0000781 "chromosome,
telomeric region" evidence=ISS] [GO:0070534 "protein K63-linked
ubiquitination" evidence=ISS] [GO:0000151 "ubiquitin ligase
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0045739 "positive regulation of DNA repair" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0010212 "response to ionizing
radiation" evidence=ISS] [GO:0033523 "histone H2B ubiquitination"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0030496 "midbody" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
InterPro:IPR017335 Pfam:PF00498 Pfam:PF13639 PIRSF:PIRSF037950
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634 GO:GO:0042803
GO:GO:0051301 GO:GO:0007067 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 Gene3D:2.60.200.20 SUPFAM:SSF49879
GO:GO:0010212 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0043486 GO:GO:0045190 GO:GO:0004842 GO:GO:0030496
GO:GO:0042393 GO:GO:0045739 GO:GO:0000151 InterPro:IPR017907
GO:GO:0070936 GO:GO:0000781 GO:GO:0006303 HSSP:P25916 GO:GO:0033523
GO:GO:0045900 GO:GO:0035861 GO:GO:0070535 HOVERGEN:HBG023954
KO:K10667 EMBL:BC113317 IPI:IPI00721755 RefSeq:NP_001039681.1
UniGene:Bt.41339 ProteinModelPortal:Q2HJ46 SMR:Q2HJ46 STRING:Q2HJ46
PRIDE:Q2HJ46 Ensembl:ENSBTAT00000010959 GeneID:515933
KEGG:bta:515933 CTD:9025 eggNOG:NOG242257
GeneTree:ENSGT00400000022349 HOGENOM:HOG000154169 InParanoid:Q2HJ46
OMA:EVTEEDW OrthoDB:EOG4TF0KP NextBio:20872060
PANTHER:PTHR15067:SF3 Uniprot:Q2HJ46
Length = 487
Score = 119 (46.9 bits), Expect = 0.00053, P = 0.00053
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEK-VLTKD-DIFID 70
L+ +C IC EY +A+ +C H FC+ CI+ W+ K K CPI K + +K + +D
Sbjct: 399 LENELQCIICSEYFVEAVTLNCAHSFCSYCINEWM--KRKVECPICRKDIKSKTRSLVLD 456
Query: 71 NYTRREILENNLTCPYKQ 88
N + + +NL K+
Sbjct: 457 NCISKMV--DNLNSEVKE 472
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 118 (46.6 bits), Expect = 0.00057, P = 0.00057
Identities = 49/237 (20%), Positives = 99/237 (41%)
Query: 8 NNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLTKDDI 67
+ ++ + F C I L+ +KD ++ S G + I+ W+ KN CP+ ++V+T+ D+
Sbjct: 2 DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL 61
Query: 68 FIDNYTRREILENNLTCPYKQCSSQLSIPE---YESHVNTCYLKYSQPSVEDITDSPTSS 124
N+T R ++++ T ++ P+ +S + + S + +
Sbjct: 62 -TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQV--KCLKR 118
Query: 125 FRNTSGIPTNKRNSKILTVTVFPEHL-NMQGSSNE--NFPCK-FYQVGCREVFKSQALLE 180
R + N N + L PE L N+ +S + N P ++ +S +LE
Sbjct: 119 LRQI--VSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSN-MLE 175
Query: 181 KHYDLKTSFHLELLFNKYCSDGSQSTNTPSHGRQDTSNQKEIEAYLMKNKEHESKLW 237
+D S E L Y D S++ + +N + +M+ +ES+ +
Sbjct: 176 NRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAY 232
>UNIPROTKB|F1RWB4 [details] [associations]
symbol:LOC100737099 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000009702 OMA:KISGHES Uniprot:F1RWB4
Length = 440
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACI-DSWIDVKGKNYCPI 57
L C ICL+YL+D + T CGH FC +C+ W ++G CP+
Sbjct: 7 LQAEASCPICLDYLRDPVTTDCGHNFCHSCLLQRWEGLQGDFPCPV 52
>ZFIN|ZDB-GENE-080213-2 [details] [associations]
symbol:btr18 "bloodthirsty-related gene family,
member 18" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000315 InterPro:IPR003877
Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080213-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00660000095328 EMBL:CT030005
Ensembl:ENSDART00000013850 Bgee:I3IT62 Uniprot:I3IT62
Length = 533
Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLT-KDDIFID 70
L +CS+CLE D + T CGH FC +C++ W + + + CP ++ T + D+ I
Sbjct: 6 LSEELQCSVCLEVFTDPVSTPCGHNFCRSCLNKCWNNSETCS-CPYCKETFTQRPDLKI- 63
Query: 71 NYTRREILEN 80
N T REI E+
Sbjct: 64 NTTLREISEH 73
>ZFIN|ZDB-GENE-070912-109 [details] [associations]
symbol:ftr33 "finTRIM family, member 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 Prosite:PS00518 ZFIN:ZDB-GENE-070912-109
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR006574 SMART:SM00589 eggNOG:NOG253021 OrthoDB:EOG4R23TJ
GeneTree:ENSGT00670000097622 HOGENOM:HOG000234136
HOVERGEN:HBG106862 EMBL:BX323812 IPI:IPI01007205
Ensembl:ENSDART00000146341 OMA:DRETITC Uniprot:B0S645
Length = 510
Score = 118 (46.6 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 6 VANNKLNLDPR-FECSICLEYLKDAILTSCGHKFCAACI-DSWI--DVKGKNYCPIDEKV 61
+A + ++L R F CS+CL+ LKD + CGH +C +CI D W D K CP +
Sbjct: 5 MAESSVSLAHREFSCSVCLDLLKDPVAIPCGHSYCMSCITDCWNQEDQKRVYSCPQCRQT 64
Query: 62 LTKDDIFIDNYTRREILE 79
+ N E+LE
Sbjct: 65 FSPRPALAKNTMLAEVLE 82
Score = 44 (20.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 22/85 (25%), Positives = 33/85 (38%)
Query: 87 KQCSSQLSIPEYESHVNTCYLKYSQPSVEDITDSPTSSFRNTSGIPTNKRNSKILTVTVF 146
++ SS IP E +L+YSQ D + T + + S V +
Sbjct: 363 RRVSSISIIPAPEPQTREQFLQYSQQFTLDPNTAHTYLVLSEGNTAVENKGS----VQPY 418
Query: 147 PEHLNMQGSSNENFPCKFYQVGCRE 171
P+H + F C + QV CRE
Sbjct: 419 PDH-------PDRFDC-WRQVLCRE 435
>ZFIN|ZDB-GENE-080212-7 [details] [associations]
symbol:zgc:173581 "zgc:173581" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-080212-7 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 KO:K12015
HOVERGEN:HBG106862 EMBL:BC154144 IPI:IPI00877475
RefSeq:NP_001108173.1 UniGene:Dr.146601 ProteinModelPortal:A8KBK1
GeneID:100137104 KEGG:dre:100137104 NextBio:20789398 Uniprot:A8KBK1
Length = 554
Score = 119 (46.9 bits), Expect = 0.00063, P = 0.00063
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 5 PVANNKLNLDPRFECSICLEYLKDAILTSCGHKFCAACIDS-WIDVKGKNYCPIDEKVLT 63
P ++ L +CSICLE D + T CGH FC +C++ W + + + CP ++ T
Sbjct: 24 PFMSSSNPLSEELQCSICLEVFTDPVSTPCGHNFCKSCLNKCWNNSQTCS-CPYCKETFT 82
Query: 64 -KDDIFIDNYTRREILEN 80
+ D+ I N T REI ++
Sbjct: 83 QRPDLKI-NTTLREISQH 99
>ZFIN|ZDB-GENE-060421-3419 [details] [associations]
symbol:btr20 "bloodthirsty-related gene family,
member 20" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-060421-3419 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000234136 HOVERGEN:HBG106862 UniGene:Dr.23709
EMBL:BC065891 IPI:IPI00758608 ProteinModelPortal:Q6P000
InParanoid:Q6P000 Uniprot:Q6P000
Length = 564
Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 13 LDPRFECSICLEYLKDAILTSCGHKFCAACIDSWIDVKGKNYCPIDEKVLT-KDDIFIDN 71
L CSICLE D + T CGH FC +C++ + + CP ++ T + D+ I N
Sbjct: 52 LSEELRCSICLEVFTDPVSTPCGHNFCKSCLNKYWNNSQTCSCPNCKETFTQRPDLKI-N 110
Query: 72 YTRREILEN 80
T REI E+
Sbjct: 111 TTLREISEH 119
>RGD|69290 [details] [associations]
symbol:Trim17 "tripartite motif-containing 17" species:10116
"Rattus norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
UniPathway:UPA00143 RGD:69290 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 HOGENOM:HOG000234133 HOVERGEN:HBG001357
OrthoDB:EOG42BX8J CTD:51127 eggNOG:NOG317461 KO:K12007 OMA:EFQKVVL
EMBL:AF156272 EMBL:BC078819 IPI:IPI00204421 PIR:JE0343
RefSeq:NP_073635.1 UniGene:Rn.48706 ProteinModelPortal:Q9WV59
PhosphoSite:Q9WV59 PRIDE:Q9WV59 Ensembl:ENSRNOT00000003885
GeneID:64702 KEGG:rno:64702 UCSC:RGD:69290 NextBio:613706
Genevestigator:Q9WV59 GermOnline:ENSRNOG00000022983 Uniprot:Q9WV59
Length = 477
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 19 CSICLEYLKDAILTSCGHKFCAACID-SWIDVKGK 52
CSICL+Y D ++T+CGH FC CI SW KGK
Sbjct: 16 CSICLDYFTDPVMTACGHNFCRECIQMSWEKGKGK 50
WARNING: HSPs involving 18 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 460 460 0.00095 118 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 268
No. of states in DFA: 621 (66 KB)
Total size of DFA: 318 KB (2163 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.12u 0.08s 45.20t Elapsed: 00:00:44
Total cpu time: 45.17u 0.08s 45.25t Elapsed: 00:00:44
Start: Thu Aug 15 14:24:15 2013 End: Thu Aug 15 14:24:59 2013
WARNINGS ISSUED: 2