Query psy7817
Match_columns 228
No_of_seqs 150 out of 1429
Neff 8.4
Searched_HMMs 46136
Date Fri Aug 16 19:40:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7817.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7817hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0517|consensus 100.0 1.2E-52 2.6E-57 401.5 15.6 212 1-228 44-258 (2473)
2 KOG0046|consensus 100.0 3.5E-37 7.5E-42 269.8 11.3 218 4-225 118-352 (627)
3 COG5069 SAC6 Ca2+-binding acti 100.0 8.4E-34 1.8E-38 246.3 -0.1 206 1-224 5-215 (612)
4 KOG0046|consensus 100.0 1.1E-31 2.3E-36 235.4 12.9 205 2-225 385-602 (627)
5 KOG0035|consensus 100.0 2.1E-31 4.5E-36 248.1 4.2 202 1-222 23-228 (890)
6 cd00014 CH Calponin homology d 99.8 9.6E-20 2.1E-24 133.1 8.0 105 6-111 2-107 (107)
7 smart00033 CH Calponin homolog 99.8 9.7E-19 2.1E-23 126.8 7.3 100 7-108 2-102 (103)
8 KOG3631|consensus 99.7 2.7E-17 5.9E-22 134.6 11.4 213 7-224 92-348 (365)
9 PF00307 CH: Calponin homology 99.7 1E-17 2.2E-22 122.5 7.6 104 7-111 1-108 (108)
10 PF00307 CH: Calponin homology 99.6 6.8E-15 1.5E-19 107.4 7.2 81 141-221 1-89 (108)
11 COG5069 SAC6 Ca2+-binding acti 99.5 7.3E-14 1.6E-18 122.6 9.7 198 9-216 123-338 (612)
12 cd00014 CH Calponin homology d 99.5 3.8E-14 8.3E-19 103.3 4.8 81 140-221 2-88 (107)
13 smart00033 CH Calponin homolog 99.4 1E-13 2.3E-18 100.2 3.7 82 141-223 2-90 (103)
14 KOG3631|consensus 99.4 7.1E-13 1.5E-17 108.9 7.5 106 4-111 256-363 (365)
15 PF11971 CAMSAP_CH: CAMSAP CH 99.3 2.6E-12 5.6E-17 89.8 3.0 76 147-222 1-84 (85)
16 KOG2046|consensus 98.7 8.9E-08 1.9E-12 75.9 8.1 87 6-95 26-113 (193)
17 KOG0518|consensus 98.7 7.1E-11 1.5E-15 112.0 -11.7 181 23-216 42-223 (1113)
18 COG5199 SCP1 Calponin [Cytoske 98.3 2.9E-06 6.3E-11 64.2 6.8 104 5-112 13-118 (178)
19 PF11971 CAMSAP_CH: CAMSAP CH 98.1 1.4E-06 3.1E-11 60.9 2.2 69 25-93 11-83 (85)
20 KOG0516|consensus 97.6 2.1E-05 4.5E-10 78.5 1.8 108 3-113 72-184 (1047)
21 PF06294 DUF1042: Domain of Un 97.6 7.2E-05 1.6E-09 58.5 3.8 96 11-111 2-100 (158)
22 KOG0035|consensus 97.3 0.00013 2.8E-09 70.0 2.9 211 8-227 145-506 (890)
23 PF06294 DUF1042: Domain of Un 97.1 0.00018 4E-09 56.2 1.4 73 144-220 1-78 (158)
24 KOG0517|consensus 96.9 0.027 5.8E-07 57.9 14.0 194 7-212 169-373 (2473)
25 KOG0532|consensus 96.8 0.0012 2.6E-08 60.8 3.6 70 28-97 595-670 (722)
26 KOG2996|consensus 96.3 0.0075 1.6E-07 55.5 5.6 83 9-93 6-101 (865)
27 KOG2046|consensus 95.9 0.015 3.2E-07 46.5 4.7 73 139-212 25-100 (193)
28 KOG0532|consensus 94.4 0.03 6.4E-07 51.9 2.7 86 136-222 569-667 (722)
29 KOG2128|consensus 94.4 0.078 1.7E-06 53.4 5.7 83 10-95 47-131 (1401)
30 KOG2996|consensus 91.7 0.078 1.7E-06 49.0 1.2 65 158-222 30-102 (865)
31 PF05622 HOOK: HOOK protein; 87.5 1.2 2.5E-05 43.2 5.7 67 7-78 9-81 (713)
32 COG5261 IQG1 Protein involved 87.0 0.99 2.2E-05 43.7 4.7 83 10-95 49-132 (1054)
33 COG5199 SCP1 Calponin [Cytoske 86.5 0.91 2E-05 34.9 3.4 73 139-212 13-87 (178)
34 KOG3000|consensus 84.7 2.6 5.6E-05 36.2 5.7 90 7-103 17-108 (295)
35 KOG3000|consensus 82.4 2.7 5.8E-05 36.1 4.9 80 139-223 15-100 (295)
36 PF05622 HOOK: HOOK protein; 74.4 1.6 3.4E-05 42.3 1.4 44 139-184 7-50 (713)
37 KOG2128|consensus 71.6 4.1 8.9E-05 41.7 3.5 77 143-221 46-129 (1401)
38 PF06395 CDC24: CDC24 Calponin 64.6 13 0.00029 26.0 4.0 61 163-223 8-74 (89)
39 COG5261 IQG1 Protein involved 57.8 6.8 0.00015 38.3 2.0 75 145-221 50-130 (1054)
40 PF06395 CDC24: CDC24 Calponin 51.0 30 0.00064 24.3 3.8 24 27-50 3-26 (89)
41 cd08541 SAM_PNT-FLI-1 Sterile 37.8 25 0.00053 24.8 1.8 35 141-176 22-59 (91)
42 PF04036 DUF372: Domain of unk 28.1 73 0.0016 18.5 2.3 33 165-203 5-37 (38)
43 PF06145 Corona_NS1: Coronavir 28.0 25 0.00055 18.6 0.4 15 213-227 9-23 (29)
44 COG1313 PflX Uncharacterized F 26.3 56 0.0012 28.3 2.4 58 141-213 273-332 (335)
45 cd08537 SAM_PNT-ESE-1-like Ste 25.9 44 0.00096 22.8 1.4 35 140-174 14-51 (78)
46 smart00857 Resolvase Resolvase 24.9 2.8E+02 0.0061 20.3 6.1 78 4-87 18-102 (148)
47 PF06198 DUF999: Protein of un 23.3 91 0.002 22.7 2.7 35 95-151 84-118 (143)
48 PF14956 DUF4505: Domain of un 22.1 57 0.0012 26.0 1.6 27 156-182 32-58 (183)
49 PF14804 Jag_N: Jag N-terminus 21.7 76 0.0016 19.7 1.8 17 196-212 6-22 (52)
50 KOG0165|consensus 21.3 6.6 0.00014 38.0 -4.4 77 30-107 352-430 (1023)
51 cd08757 SAM_PNT_ESE Sterile al 20.7 72 0.0016 21.0 1.6 34 142-175 8-44 (68)
52 cd08203 SAM_PNT Sterile alpha 20.6 74 0.0016 20.7 1.7 33 142-174 8-41 (66)
53 cd08539 SAM_PNT-ESE-3-like Ste 20.2 45 0.00098 22.5 0.6 34 141-174 10-46 (74)
No 1
>KOG0517|consensus
Probab=100.00 E-value=1.2e-52 Score=401.54 Aligned_cols=212 Identities=47% Similarity=0.728 Sum_probs=194.6
Q ss_pred ChHHHHHHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcC-CCCCCccchhhhHHHHHHHHHhC
Q psy7817 1 EQERVQKKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEK-GRNLRRPHFLSNANTALQFLQSK 79 (228)
Q Consensus 1 ~~~~~q~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~-~~~~~~~~~i~N~~~~l~~~~~~ 79 (228)
|++.+||||||+|+|+||... .+.|.|||+||+||+.|++|+|+|+|+.+|.+. ++. |+|++||+++||+|++..
T Consensus 44 ERe~vQKKTFTKWvNShL~rv--~c~I~DLy~DlrDG~~LlkLLEvlSGE~LpkPtrGRM--RIH~LENvdKaLqFLkeq 119 (2473)
T KOG0517|consen 44 EREAVQKKTFTKWVNSHLARV--SCRIGDLYTDLRDGIMLLKLLEVLSGERLPKPTRGRM--RIHCLENVDKALQFLKEQ 119 (2473)
T ss_pred HHHHHHHHhHHHHHHHHHHHh--cchhHHHHHHHhhhHHHHHHHHHHccccCCCCCCCce--eehhHhhhHHHHHHHHhc
Confidence 688999999999999999643 688999999999999999999999999999764 444 899999999999999999
Q ss_pred CceeeecCCCCccCCchhHHHHHHHHHHHHhhhhhhhHHHHhhccCCCCCCCCCCcccccHHHHHHHHHHhhCCCC--cc
Q psy7817 80 RIKLVNINSSDLVDGRPAVVLGLIWTIILYFQIEENTRALAALSAEGYTSPEPGKKDVESAKKTLLRWVSNALPEH--IK 157 (228)
Q Consensus 80 g~~~~~i~~~di~~g~~~~iL~llw~li~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~~~l~~~--~~ 157 (228)
.+.+.+|+++||||||..+||||||+||++|||+++.-. . ..+.+..+++.+||-||+.++.+| +.
T Consensus 120 kVhLEniGshDIVDGN~rL~LGLIWTIILRFQIq~I~ie-----~-------edn~E~rSAKDALLLWCQmKTAGYpnVN 187 (2473)
T KOG0517|consen 120 KVHLENIGSHDIVDGNHRLILGLIWTIILRFQIQDISIE-----T-------EDNRETRSAKDALLLWCQMKTAGYPNVN 187 (2473)
T ss_pred ccccccCCcccccCCcchhhHHHHHHHHHheeeeeeEee-----c-------ccchhhhhHHHHHHHHHHhhccCCCCcc
Confidence 999999999999999999999999999999999863211 1 111255689999999999999999 99
Q ss_pred eecCCCCCcchhhHHHHHHHhcCCCCCCcccCcCCHHHHHHHHHHHHHhcCCCCCCCChhhhcccCCCCCC
Q psy7817 158 VSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSKQTNRHRLDTAFNVAESNLGIARLLDPEVRQFLFLHVKD 228 (228)
Q Consensus 158 I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~~~~~~n~~~a~~~A~~~lgip~ll~p~Di~~~~~~~~~ 228 (228)
|+|||+||+||.+|.+|||+.+|+++||+.+.++++..|++.||+.|+.+|||+++|+||||..-+||+|.
T Consensus 188 I~nFTtSWRdGLaFNALIHkHRPDLvDf~~L~k~na~~NL~~AFdvAE~~LGia~LLDpEDV~v~~PDEKS 258 (2473)
T KOG0517|consen 188 ITNFTTSWRDGLAFNALIHKHRPDLVDFDKLKKSNALYNLQHAFDVAEQELGIAKLLDPEDVNVEQPDEKS 258 (2473)
T ss_pred cccCccchhcchhHHHHHHhcCcchhhhcccCCCchhhHHHHHHHHHHHHcCchhcCCHhhcCccCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999983
No 2
>KOG0046|consensus
Probab=100.00 E-value=3.5e-37 Score=269.82 Aligned_cols=218 Identities=28% Similarity=0.401 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHhhhccC-----CCCC--CccchHHHhhhHHHHHHHHHHHcCCCCCC---cCCCCCCccchhhhHHHHH
Q psy7817 4 RVQKKTFVNWINSYLSKR-----HPPL--RIDDLTEDLKDGTKLLALLEVLSNEKLPV---EKGRNLRRPHFLSNANTAL 73 (228)
Q Consensus 4 ~~q~~~~~~WiN~~L~~~-----~~~~--~v~dl~~dl~DGv~L~~Lle~l~~~~~~~---~~~~~~~~~~~i~N~~~~l 73 (228)
+-++.+|++|||++|+.. ..|+ .-++||...+||++||+|++..-|+++.. +.+++.++++..||.+.||
T Consensus 118 eeEk~~fv~hIN~~L~~Dpdl~~~lPinp~t~~lf~~vkDGvlLcKlIN~svPdTIDERaiN~kk~Lnp~~~~EN~~l~l 197 (627)
T KOG0046|consen 118 EEEKRAFVNHINSYLEGDPDLKHLLPINPNTNDLFDLVKDGVLLCKLINLSVPDTIDERAINTKKKLNPFERNENLNLAL 197 (627)
T ss_pred HHHHHHHHHHHHHHhcCCcchhhcCCCCCchHHHHHHhccceeeehhhcccCCCchhhhhhccCCcCChhhhccchhhHH
Confidence 457899999999999742 1222 35889999999999999999988888753 2366778999999999999
Q ss_pred HHHHhCCceeeecCCCCccCCchhHHHHHHHHHHHHhhhhh----hhHHHHhhccCCCCCCCCCCcccccHHHHHHHHHH
Q psy7817 74 QFLQSKRIKLVNINSSDLVDGRPAVVLGLIWTIILYFQIEE----NTRALAALSAEGYTSPEPGKKDVESAKKTLLRWVS 149 (228)
Q Consensus 74 ~~~~~~g~~~~~i~~~di~~g~~~~iL~llw~li~~~~i~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~ 149 (228)
+.++..||.+++|+++||.+|.++++|||+||||+..-+.+ .+|.+..|-.++++ ..+....++++.||||+|
T Consensus 198 nSAkAiGc~VvNIga~Dl~eGrphLVLGLiwQiIkiglladi~l~~~p~L~~Ll~d~e~---lEelm~L~PEkiLLrW~N 274 (627)
T KOG0046|consen 198 NSAKAIGCTVVNIGAQDLAEGRPHLVLGLIWQIIKIGLLADINLKKNPQLVRLLEDGET---LEELMRLPPEKILLRWMN 274 (627)
T ss_pred hhcccccceEEecCchhhhcCCceeeHHHHHHHHHHHHhhhcccccCHHHHHHHhCCcc---HHHHhcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999998654432 35677667665543 566788899999999999
Q ss_pred hhCCCC---cceecCCCCCcchhhHHHHHHHhcCCCCCCcccCcCCHHHHHHHHHHHHHhcCCCCCCCChhhhcccCCC
Q psy7817 150 NALPEH---IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSKQTNRHRLDTAFNVAESNLGIARLLDPEVRQFLFLH 225 (228)
Q Consensus 150 ~~l~~~---~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~~~~~~n~~~a~~~A~~~lgip~ll~p~Di~~~~~~ 225 (228)
+|++.. ..++||++|+.||.+|.+|++++.|..++...+...+..+|++..++.|+ ++||.++++|.|+|.+.+.
T Consensus 275 ~HL~kag~~k~~~nFs~DikD~eaY~~LLnqlap~~~~~~~l~~~d~l~RA~~vLq~Ae-kl~Cr~~ltp~dvV~G~~k 352 (627)
T KOG0046|consen 275 YHLKKAGWKKTVTNFSSDIKDSEAYTHLLNQLAPEHCSPAPLQETDDLERAELVLQQAE-KLDCRRYLTPTDVVAGNPK 352 (627)
T ss_pred HHHHhcccceehhhhhhhhccHHHHHHHHHHhccccCCccccccCChHhHHHHHHHHHH-hcCCccccCHHHHhcCCch
Confidence 999875 78899999999999999999999999999999999999999999999999 8999999999999988753
No 3
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=99.97 E-value=8.4e-34 Score=246.29 Aligned_cols=206 Identities=34% Similarity=0.521 Sum_probs=181.9
Q ss_pred ChHHHHHHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHhCC
Q psy7817 1 EQERVQKKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQSKR 80 (228)
Q Consensus 1 ~~~~~q~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~~g 80 (228)
+|+.+|+++|++|.|..|..+..+ .+.+|..|++||+.|.++++.+.......+...|-.+.|+++|++.+++|.+..|
T Consensus 5 kwq~vq~ktftkw~nekL~s~~~~-~~~dL~~Dl~dgv~l~qlLe~~~kd~~g~yn~~p~tr~h~~envs~~le~ik~kg 83 (612)
T COG5069 5 KWQKVQKKTFTKWTNEKLISGGQK-EFGDLDTDLKDGVKLAQLLEALQKDNAGEYNETPETRIHVMENVSGRLEFIKGKG 83 (612)
T ss_pred HHHHHhhccchHHHhHHHhhcccH-HHhhhccccccHHHHHHHHHHhhhccccccCCCHHHHHHHhhccccceeeeccCC
Confidence 589999999999999999765433 5899999999999999999999877666666666678999999999999999999
Q ss_pred ceeeecCCCCccCCchhHHHHHHHHHHHHhhhhhhhHHHHhhccCCCCCCCCCCcccccHHHHHHHHHHhhCCCC---cc
Q psy7817 81 IKLVNINSSDLVDGRPAVVLGLIWTIILYFQIEENTRALAALSAEGYTSPEPGKKDVESAKKTLLRWVSNALPEH---IK 157 (228)
Q Consensus 81 ~~~~~i~~~di~~g~~~~iL~llw~li~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~~~l~~~---~~ 157 (228)
+++.+|+|.||++|+++.++|++|+++.++.+.... .+ ...+.+.-++.||...++.| +.
T Consensus 84 ~~l~Nigp~divdGn~klilGliw~lisr~tia~in-------Ee----------gelt~~~~lllwc~~~t~~y~p~vd 146 (612)
T COG5069 84 VKLFNIGPQDIVDGNPKLILGLIWSLISRLTIATIN-------EE----------GELTKHINLLLWCDEDTGGYKPEVD 146 (612)
T ss_pred ceeeeeCccccccCchhhhheeeeeeeehhhhhccc-------ch----------hhHHhhhhhheeccccccCcCCCcc
Confidence 999999999999999999999999999999876421 11 12467788999999999998 66
Q ss_pred eecCCCCCcchhhHHHHHHHhcCCCCCCcccC--cCCHHHHHHHHHHHHHhcCCCCCCCChhhhcccCC
Q psy7817 158 VSDFGPSWRDGHAFLSVIDNIQKDLVDIPALS--KQTNRHRLDTAFNVAESNLGIARLLDPEVRQFLFL 224 (228)
Q Consensus 158 I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~--~~~~~~n~~~a~~~A~~~lgip~ll~p~Di~~~~~ 224 (228)
+.+|+.+|+||.+||+|||..+|+.+|+..++ ..++.-|..+||+.|+..+|+|+++..+||+.++.
T Consensus 147 ~~df~rswrdGLaf~aLIh~~rPDtld~n~ld~qkknk~~n~~qafe~a~k~Igi~rli~vedivnV~~ 215 (612)
T COG5069 147 TFDFFRSWRDGLAFSALIHDSRPDTLDPNVLDLQKKNKALNNFQAFENANKVIGIARLIGVEDIVNVSI 215 (612)
T ss_pred HHHHHHHhhhhHHHHHHHhhcCCcccCccccchhhcccchhHHHHHHHHHHhhchHhhcCcceeeecCC
Confidence 78999999999999999999999999988876 56777899999999999999999999999998763
No 4
>KOG0046|consensus
Probab=99.97 E-value=1.1e-31 Score=235.43 Aligned_cols=205 Identities=24% Similarity=0.402 Sum_probs=174.8
Q ss_pred hHHHHHHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcC-CCC---C-CccchhhhHHHHHHHH
Q psy7817 2 QERVQKKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEK-GRN---L-RRPHFLSNANTALQFL 76 (228)
Q Consensus 2 ~~~~q~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~-~~~---~-~~~~~i~N~~~~l~~~ 76 (228)
.+..+.++|+.|+|+.- + ...|+++++|++||.+|..++++++++.+.+.+ .+| . ..+.++|||+.|.+..
T Consensus 385 ~~~reer~fr~WmNSlg---v-~p~vn~~f~Dl~dglVllq~~dki~pg~Vnwk~vnKp~~~~~~~~kklENcNyav~lG 460 (627)
T KOG0046|consen 385 EESREERTFRLWMNSLG---V-NPYVNNLFEDLRDGLVLLQLYDKVSPGSVNWKHVNKPPSPLKMPFKKVENCNYAVKLG 460 (627)
T ss_pred hHHHHHHHHHHHHHhcC---C-cHHHHHHHHhhhhhhHHHHHHHHccCCccchhhccCCCCcccccHHHhhcchHHHHHH
Confidence 35677899999999985 2 335999999999999999999999998776542 111 1 2578999999999999
Q ss_pred HhCCceeeecCCCCccCCchhHHHHHHHHHHHHhhhhhhhHHHHhhccCCCCCCCCCCcccccHHHHHHHHHHhhCCCC-
Q psy7817 77 QSKRIKLVNINSSDLVDGRPAVVLGLIWTIILYFQIEENTRALAALSAEGYTSPEPGKKDVESAKKTLLRWVSNALPEH- 155 (228)
Q Consensus 77 ~~~g~~~~~i~~~di~~g~~~~iL~llw~li~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~~~l~~~- 155 (228)
++++..+++|.+.||++||.++||+|+|||||+|.++. +..++..+. ......++.|+|+.+...
T Consensus 461 k~~~FSLVgi~G~DI~dGNk~LtLAlvWQLMR~ytL~v----L~~l~~~~~----------~~tD~dIv~WaN~klk~~G 526 (627)
T KOG0046|consen 461 KQLKFSLVGIAGQDIVDGNKTLTLALVWQLMRRYTLQV----LKSLRSGGK----------DITDSDIVNWANRKLKKAG 526 (627)
T ss_pred hhcceeeeccccccccccchHhHHHHHHHHHHHHHHHH----HHHHhhcCC----------CCcHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999998863 333443332 256789999999998775
Q ss_pred --cceecCC-CCCcchhhHHHHHHHhcCCCCCCcccCc----CCHHHHHHHHHHHHHhcCCCCCCCChhhhcccCCC
Q psy7817 156 --IKVSDFG-PSWRDGHAFLSVIDNIQKDLVDIPALSK----QTNRHRLDTAFNVAESNLGIARLLDPEVRQFLFLH 225 (228)
Q Consensus 156 --~~I~nf~-~s~~DG~~l~~Li~~~~p~~~~~~~~~~----~~~~~n~~~a~~~A~~~lgip~ll~p~Di~~~~~~ 225 (228)
.+|.+|. .+.+||..+..||+.+.|+.+||+-+.. +++..|+.||++.|+ ++|+..++=||||+.+.+.
T Consensus 527 k~s~IrSFkD~siS~g~~vLDLidaI~P~~Vn~~LV~~G~t~EdK~~NAkYaIS~AR-KiGa~IyaLPEDIvEV~pK 602 (627)
T KOG0046|consen 527 KKSQIRSFKDKSISDGLFVLDLLDAIKPGVVNYSLVTSGNTDEEKLLNAKYAISVAR-KLGASIYALPEDIVEVNPK 602 (627)
T ss_pred CccccccccCcccccCcchHHHHhhcCcCccchhhccCCCChhhhhhcchhhHhHHH-hhCceEEeccHHHhhhchh
Confidence 8899997 8999999999999999999999988754 367789999999999 9999999999999988653
No 5
>KOG0035|consensus
Probab=99.97 E-value=2.1e-31 Score=248.13 Aligned_cols=202 Identities=43% Similarity=0.642 Sum_probs=183.3
Q ss_pred ChHHHHHHHHHHHHHhhhc-cCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHhC
Q psy7817 1 EQERVQKKTFVNWINSYLS-KRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQSK 79 (228)
Q Consensus 1 ~~~~~q~~~~~~WiN~~L~-~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~~ 79 (228)
.|+++|.++|+.|.|++|. +. .-.|.++.+|++||+.|..|++...|..++..... ..++|+++|++.++.|.+.-
T Consensus 23 ~~e~~q~kTft~W~~s~L~ir~--~s~ie~~e~D~~n~lk~~~l~ev~~~e~l~~~~~~-~~r~hk~En~~~~l~~~~sk 99 (890)
T KOG0035|consen 23 AWEKVQLKTFTKWCNSKLRIRA--GSSIEEIEEDFSNGLKLLILLEVISGENLPPPTRG-KMRVHKLENVNKALVFIESK 99 (890)
T ss_pred cHHHHhccccccccchhhhhcc--cCccchhhhhhhhhhhhhhhcccccCCccCCCCCC-ccchhhhccccceEEEeccc
Confidence 4899999999999999996 32 23589999999999999999999999998876444 45999999999999999999
Q ss_pred CceeeecCCCCccCCchhHHHHHHHHHHHHhhhhhhhHHHHhhccCCCCCCCCCCcccccHHHHHHHHHHhhCCCC--cc
Q psy7817 80 RIKLVNINSSDLVDGRPAVVLGLIWTIILYFQIEENTRALAALSAEGYTSPEPGKKDVESAKKTLLRWVSNALPEH--IK 157 (228)
Q Consensus 80 g~~~~~i~~~di~~g~~~~iL~llw~li~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~~~l~~~--~~ 157 (228)
|+..++|+|++|++|+.+++++++|.++.+|-+.+.... -..++++.++.||+..+..| +.
T Consensus 100 ~v~~~~iga~eivd~n~~~~l~~i~tlilr~~i~~is~~-----------------~e~~a~egllLwcq~~Ta~y~~v~ 162 (890)
T KOG0035|consen 100 GVKLVSIGAEEIVDGNLKLTLGLIWTLILRFAIQDISVE-----------------CELSAKEGLLLWCQRKTAPYSNVN 162 (890)
T ss_pred cccccccchhhhcCcchhhhhHHHHHhhccccccchhhh-----------------cchhhhhhhhhheecccCCccccc
Confidence 999999999999999999999999999999988752211 12468899999999999999 99
Q ss_pred eecCCCCCcchhhHHHHHHHhcCCCCC-CcccCcCCHHHHHHHHHHHHHhcCCCCCCCChhhhccc
Q psy7817 158 VSDFGPSWRDGHAFLSVIDNIQKDLVD-IPALSKQTNRHRLDTAFNVAESNLGIARLLDPEVRQFL 222 (228)
Q Consensus 158 I~nf~~s~~DG~~l~~Li~~~~p~~~~-~~~~~~~~~~~n~~~a~~~A~~~lgip~ll~p~Di~~~ 222 (228)
|.||+++|+||.+||+++|..+|+++| |+.++..+..+|++.||+.|+..+|||+.|+|+|++..
T Consensus 163 v~nF~~sw~~gl~f~A~ih~~Rpdli~~y~~lt~~~~~~n~~~A~~iAek~l~i~r~ld~ed~~~~ 228 (890)
T KOG0035|consen 163 VQNFHTSWKDGLAFCALIHRHRPDLIDQYDKLTKQDPVENLNLAFDIAEKFLGIPRLLDAEDIVEA 228 (890)
T ss_pred cccceecccchHHHHHHHHhcChhhhhhhhhcCccchhHHhhhhhhhhhhcCCcccccCccccccC
Confidence 999999999999999999999999999 99999999999999999999999999999999999976
No 6
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.81 E-value=9.6e-20 Score=133.14 Aligned_cols=105 Identities=39% Similarity=0.639 Sum_probs=93.7
Q ss_pred HHHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHhCCceeee
Q psy7817 6 QKKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQSKRIKLVN 85 (228)
Q Consensus 6 q~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~~g~~~~~ 85 (228)
|++++++|+|.++.+..+ ..++|+.++|+||++||+|++.+.|+.++.....+.+++++++|++.+++++++.|++...
T Consensus 2 ~~~~l~~Win~~l~~~~~-~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~gi~~~~ 80 (107)
T cd00014 2 QKEELLRWINKVLGEYGP-VTINNFSTDLKDGIALCKLLNSLSPDLIDKKKINPLSRFKRLENINLALNFAEKLGVPVVN 80 (107)
T ss_pred hHHHHHHHHHHHhccCCC-ccHHHHHHHHhchHHHHHHHHHHCccccccccccccchhhHHHHHHHHHHHHHHcCCceec
Confidence 688999999999976533 3589999999999999999999999988765544566889999999999999999998767
Q ss_pred cCCCCcc-CCchhHHHHHHHHHHHHhh
Q psy7817 86 INSSDLV-DGRPAVVLGLIWTIILYFQ 111 (228)
Q Consensus 86 i~~~di~-~g~~~~iL~llw~li~~~~ 111 (228)
+.++||+ +||.+.+++++|+|+++|.
T Consensus 81 ~~~~Dl~~~~n~~~vl~~l~~l~~~~~ 107 (107)
T cd00014 81 FDAEDLVEDGDEKLVLGLLWSLIRKFL 107 (107)
T ss_pred cCHHHHhhCCCceeeHHHHHHHHHhhC
Confidence 9999999 9999999999999999873
No 7
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.77 E-value=9.7e-19 Score=126.78 Aligned_cols=100 Identities=37% Similarity=0.584 Sum_probs=87.8
Q ss_pred HHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCC-CCCCccchhhhHHHHHHHHHhCCceeee
Q psy7817 7 KKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKG-RNLRRPHFLSNANTALQFLQSKRIKLVN 85 (228)
Q Consensus 7 ~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~-~~~~~~~~i~N~~~~l~~~~~~g~~~~~ 85 (228)
++++++|+|.++.+.. +..++|+.++|+||++||+|++.+.|+.++.... .+.+++++++|++.+++++++.|+....
T Consensus 2 ~~~l~~Win~~l~~~~-~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~~~~~~~~~~~Ni~~~l~~~~~~g~~~~~ 80 (103)
T smart00033 2 EKTLLRWVNSLLAEYG-KPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVNASLSRFKKIENINLALSFAEKLGGKLVL 80 (103)
T ss_pred hHHHHHHHHHHcccCC-CCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhccccccHHHHHHhHHHHHHHHHHcCCeeec
Confidence 6789999999997642 3568999999999999999999999998875433 3445789999999999999999987889
Q ss_pred cCCCCccCCchhHHHHHHHHHHH
Q psy7817 86 INSSDLVDGRPAVVLGLIWTIIL 108 (228)
Q Consensus 86 i~~~di~~g~~~~iL~llw~li~ 108 (228)
+.++||++|+ +.+++++|+|++
T Consensus 81 ~~~~Dl~~~~-k~~~~v~~~l~~ 102 (103)
T smart00033 81 FEPEDLVEGN-KLILGVIWTLIL 102 (103)
T ss_pred cCHHHHhhcc-hHHHHHHHHHHh
Confidence 9999999999 999999999975
No 8
>KOG3631|consensus
Probab=99.73 E-value=2.7e-17 Score=134.63 Aligned_cols=213 Identities=20% Similarity=0.265 Sum_probs=147.7
Q ss_pred HHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCC--CCccchhhhHHHHHHHHHh-CCcee
Q psy7817 7 KKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRN--LRRPHFLSNANTALQFLQS-KRIKL 83 (228)
Q Consensus 7 ~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~--~~~~~~i~N~~~~l~~~~~-~g~~~ 83 (228)
.+.+..|||..|. ...+.|.+|.+|+.||.+|.+|+|+|...++....... ..+.|++.-+-.+.+-.-. -+..
T Consensus 92 ~kvLi~WiN~~L~--~erIvVr~LeEDlfDGqilqkL~ekL~~~klev~evtqse~~QkqKLq~Vleavnr~L~~~~~q- 168 (365)
T KOG3631|consen 92 VKVLIDWINDVLV--PERIVVRSLEEDLFDGQILQKLFEKLAALKLEVAEVTQSEIGQKQKLQTVLEAVNRSLQLPEWQ- 168 (365)
T ss_pred HHHHHHHHHHhhc--chhhhHHhhHHhhhhhHHHHHHHHHHHhhhccchhhhhhhHHHHHHHHHHHHHHHHHhcCchhh-
Confidence 3678999999994 33567899999999999999999999988776542221 1233444443333322211 2222
Q ss_pred eecCCCCccCCchhHHHHHHHHHHHHhhhhhhhH------------------------H----HHhhccCCCCC------
Q psy7817 84 VNINSSDLVDGRPAVVLGLIWTIILYFQIEENTR------------------------A----LAALSAEGYTS------ 129 (228)
Q Consensus 84 ~~i~~~di~~g~~~~iL~llw~li~~~~i~~~~~------------------------~----~~~l~~~~~~~------ 129 (228)
...+++.|.+.+.-+|+.|+..+..||+..-..| . ...+...++.+
T Consensus 169 ~kWsvdsIh~Kdl~ailhLLVaLa~~frapirlPdnV~v~Vvvvqk~~g~lks~~i~EqlT~~tt~l~~~~~rDaFDtLF 248 (365)
T KOG3631|consen 169 AKWSVDSIHNKDLVAILHLLVALAKHFRAPIRLPDNVQVQVVVVQKREGGLKSEKIVEQLTTYTTDLDGRPERDAFDTLF 248 (365)
T ss_pred hccchhhhccchHHHHHHHHHHHHHHcCCCccCCCceEEEEEEEEeccccchHHHHHHHHhhhhHhhcCCCchhhHHHHH
Confidence 2367888888888899999999999997541111 0 00111111111
Q ss_pred CCCCCcccccHHHHHHHHHHhhCCCC-cceecCCCCCcchhhHHHHHHHhcCCCCCCccc-----CcCCHHHHHHHHHHH
Q psy7817 130 PEPGKKDVESAKKTLLRWVSNALPEH-IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPAL-----SKQTNRHRLDTAFNV 203 (228)
Q Consensus 130 ~~~~~~~~~~~~~~Ll~Wv~~~l~~~-~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~-----~~~~~~~n~~~a~~~ 203 (228)
...+++. ...++.|+.+||.|+.+. +.|+++.+.|+||+.+.-|+..+.+-.+++..+ +...+.+|+++||++
T Consensus 249 d~aPdKl-n~VK~sli~FvNkhLnklnLeVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~eekv~NVsfAfeL 327 (365)
T KOG3631|consen 249 DHAPDKL-NVVKKSLITFVNKHLNKLNLEVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSFEEKVHNVSFAFEL 327 (365)
T ss_pred hhCcHHH-HHHHHHHHHHHHHHhhhccceeehhhhhhccchHHHHHHHhhccceeecceeecCCCCHHHHHHHHHHHHHH
Confidence 1111111 147889999999999887 899999999999999999999887766655432 334678999999999
Q ss_pred HHhcCCC-CCCCChhhhcccCC
Q psy7817 204 AESNLGI-ARLLDPEVRQFLFL 224 (228)
Q Consensus 204 A~~~lgi-p~ll~p~Di~~~~~ 224 (228)
++ .-|. .+..+|+||++.++
T Consensus 328 m~-D~GL~kp~~rpeDIvN~D~ 348 (365)
T KOG3631|consen 328 MK-DGGLEKPKVRPEDIVNKDL 348 (365)
T ss_pred HH-ccCcCCCCCChHHhhcccH
Confidence 99 6777 45799999998765
No 9
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.73 E-value=1e-17 Score=122.49 Aligned_cols=104 Identities=30% Similarity=0.460 Sum_probs=88.1
Q ss_pred HHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCC--CCccchhhhHHHHHHHHHh-CCcee
Q psy7817 7 KKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRN--LRRPHFLSNANTALQFLQS-KRIKL 83 (228)
Q Consensus 7 ~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~--~~~~~~i~N~~~~l~~~~~-~g~~~ 83 (228)
++++.+|||.++.+......|.++.++|+||++||+|++.+.|+.++.....+ .+.+++++|++.+++++++ .|++.
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~~ 80 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFSEDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIPP 80 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTSGGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcccccCCCCcCcHHHHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999975423557899999999999999999999999886554422 2568999999999999999 99997
Q ss_pred eecCCCCcc-CCchhHHHHHHHHHHHHhh
Q psy7817 84 VNINSSDLV-DGRPAVVLGLIWTIILYFQ 111 (228)
Q Consensus 84 ~~i~~~di~-~g~~~~iL~llw~li~~~~ 111 (228)
.. +++||+ +|+.+.+++++|+|+.+|+
T Consensus 81 ~~-~~~dl~~~~~~~~vl~~l~~l~~~~e 108 (108)
T PF00307_consen 81 LL-SPEDLVEKGDEKSVLSFLWQLFRYFE 108 (108)
T ss_dssp TS--HHHHHSTT-HHHHHHHHHHHHHHHT
T ss_pred CC-CHHHHHHCcCHHHHHHHHHHHHHHHC
Confidence 64 999999 9999999999999999985
No 10
>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []. It comprises the following groups of actin-binding domains: Actinin-type (including spectrin, fimbrin, ABP-280) (see IPR001589 from INTERPRO). Calponin-type (see IPR000557 from INTERPRO). A comprehensive review of proteins containing this type of actin-binding domains is given in []. The CH domain is involved in actin binding in some members of the family. However in calponins there is evidence that the CH domain is not involved in its actin binding activity []. Most proteins have two copies of the CH domain, however some proteins such as calponin and the human vav proto-oncogene (P15498 from SWISSPROT) have only a single copy. The structure of an example CH-domain has recently been solved []. This entry represents the calponin-homology (CH) domain, a superfamily of actin-binding domains found in cytoskeletal proteins (contain two CH domain in tandem repeat), in regulatory proteins from muscle, and in signal transduction proteins. This domain has a core structure consisting of a 4-helical bundle. This domain is found in: Calponin, which is involved in the regulation of contractility and organisation of the actin cytoskeleton in smooth muscle cells []. Beta-spectrin, a major component of a submembrane cytoskeletal network connecting actin filaments to integral plasma membrane proteins []. The actin-cross-linking domain of the fimbrin/plastin family of actin filament bundling or cross-linking proteins []. Utrophin,a close homologue of dystrophin []. Dystrophin, the protein found to be defective in Duchenne muscular dystrophy; this protein contains a tandem repeat of two CH domains []. Actin-binding domain of plectin, a large and widely expressed cytolinker protein []. The N-terminal microtubule-binding domain of microtubule-associated protein eb1 (end-binding protein), a member of a conserved family of proteins that localise to the plus-ends of microtubules []. Ras GTPase-activating-like protein rng2, an IQGAP protein that is essential for the assembly of an actomyosin ring during cytokinesis []. Transgelin, which suppresses androgen receptor transactivation []. ; GO: 0005515 protein binding; PDB: 2DK9_A 1WYL_A 1WKU_B 1TJT_A 3FER_A 2WA7_A 2WA5_A 2WA6_A 2R0O_A 1PXY_A ....
Probab=99.57 E-value=6.8e-15 Score=107.45 Aligned_cols=81 Identities=27% Similarity=0.512 Sum_probs=72.0
Q ss_pred HHHHHHHHHhhCCCC---cceecCCCCCcchhhHHHHHHHhcCCCCCCcccCcC-----CHHHHHHHHHHHHHhcCCCCC
Q psy7817 141 KKTLLRWVSNALPEH---IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSKQ-----TNRHRLDTAFNVAESNLGIAR 212 (228)
Q Consensus 141 ~~~Ll~Wv~~~l~~~---~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~~-----~~~~n~~~a~~~A~~~lgip~ 212 (228)
++.+++|+|.++..+ .+|+||.++|+||++||.|++.+.|+.+++..+.+. +..+|++.|++.+++.+|+|.
T Consensus 1 e~~ll~Win~~l~~~~~~~~v~~~~~~l~dG~~L~~Li~~l~p~~i~~~~~~~~~~~~~~~~~Ni~~~l~~~~~~lg~~~ 80 (108)
T PF00307_consen 1 EKELLKWINSHLEKYGKGRRVTNFSEDLRDGVVLCKLINKLFPGTIDLKKINPNLKSPFDKLENIELALEAAEKKLGIPP 80 (108)
T ss_dssp HHHHHHHHHHHHTTSTTTSTCSSTSGGGTTSHHHHHHHHHHSTTSSSGGGSSTSSSSHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHcccccCCCCcCcHHHHhcCHHHHHHHHHHHhhccchhhhccccchhhhHHHHHHHHHHHHHHHHcCCCC
Confidence 478999999999764 689999999999999999999999999999888433 578999999999997799999
Q ss_pred CCChhhhcc
Q psy7817 213 LLDPEVRQF 221 (228)
Q Consensus 213 ll~p~Di~~ 221 (228)
.++|+|++.
T Consensus 81 ~~~~~dl~~ 89 (108)
T PF00307_consen 81 LLSPEDLVE 89 (108)
T ss_dssp TS-HHHHHS
T ss_pred CCCHHHHHH
Confidence 999999984
No 11
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=99.51 E-value=7.3e-14 Score=122.58 Aligned_cols=198 Identities=20% Similarity=0.254 Sum_probs=151.6
Q ss_pred HHHHHHHhhhcc------CCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCc------CCCCCCccchhhhHHHHHHHH
Q psy7817 9 TFVNWINSYLSK------RHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVE------KGRNLRRPHFLSNANTALQFL 76 (228)
Q Consensus 9 ~~~~WiN~~L~~------~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~------~~~~~~~~~~i~N~~~~l~~~ 76 (228)
.|++.+|..|.- ..|+..+-|++..++||.+||+|++.-.|..+... +.++.+.++..+|.+.++..+
T Consensus 123 elt~~~~lllwc~~~t~~y~p~vd~~df~rswrdGLaf~aLIh~~rPDtld~n~ld~qkknk~~n~~qafe~a~k~Igi~ 202 (612)
T COG5069 123 ELTKHINLLLWCDEDTGGYKPEVDTFDFFRSWRDGLAFSALIHDSRPDTLDPNVLDLQKKNKALNNFQAFENANKVIGIA 202 (612)
T ss_pred hHHhhhhhheeccccccCcCCCccHHHHHHHhhhhHHHHHHHhhcCCcccCccccchhhcccchhHHHHHHHHHHhhchH
Confidence 588888887752 34556788999999999999999998887765432 345566789999999999999
Q ss_pred HhCC-ceeeecCCCCccCCchhHHHHHHHHHHHHhhhhhhh---HHHHhhccCCCCCCCCCCcccccHHHHHHHHHH-hh
Q psy7817 77 QSKR-IKLVNINSSDLVDGRPAVVLGLIWTIILYFQIEENT---RALAALSAEGYTSPEPGKKDVESAKKTLLRWVS-NA 151 (228)
Q Consensus 77 ~~~g-~~~~~i~~~di~~g~~~~iL~llw~li~~~~i~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~-~~ 151 (228)
+-.| +.+++++..| + ...+|+ +.|+++++-.++... .++.++-...+. ..+ ...+.+..+++|.+ .|
T Consensus 203 rli~vedivnV~~pD--E-Rsimty-v~~y~~rf~~l~Kid~al~rv~rllE~~et---~~q-lrl~yE~~l~rll~~i~ 274 (612)
T COG5069 203 RLIGVEDIVNVSIPD--E-RSIMTY-VSWYIIRFGLLEKIDIALHRVYRLLEADET---LIQ-LRLPYEIILLRLLNLIH 274 (612)
T ss_pred hhcCcceeeecCCcc--h-HHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHH---HHH-hcCCHHHHHHHHHHHHH
Confidence 9977 7788888888 3 556666 899998764443221 122222222111 111 44578999999999 77
Q ss_pred CCCC-cceecCCCCCcchhhHHHHHHHhcCCCCCCcccCcCCHHHHHHHHHHHHHhcCCCCCCCCh
Q psy7817 152 LPEH-IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSKQTNRHRLDTAFNVAESNLGIARLLDP 216 (228)
Q Consensus 152 l~~~-~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~~~~~~n~~~a~~~A~~~lgip~ll~p 216 (228)
+... .++.||+.+.+||..+..|++++. .+|....+...+..+++......|+ .+.|.+.+.|
T Consensus 275 ~~q~~w~v~~f~k~vsd~en~t~ll~ql~-alcsRa~lettdl~sl~gqi~~n~e-~y~~RKY~pP 338 (612)
T COG5069 275 LKQANWKVVNFSKDVSDGENYTDLLNQLN-ALCSRAPLETTDLHSLAGQILQNAE-KYDCRKYLPP 338 (612)
T ss_pred HHhcccchhhhhhhhhhHHHHHHHHHHHH-HHhhcccchhhhHHHHHHHHHHHHH-HhhhhccCCC
Confidence 7655 779999999999999999999999 6777777766677789999999999 9999999999
No 12
>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like spectrin, alpha-actinin, dystrophin, utrophin, and fimbrin, proteins essential for regulation of cell shape (cortexillins), and signaling proteins (Vav).
Probab=99.48 E-value=3.8e-14 Score=103.34 Aligned_cols=81 Identities=28% Similarity=0.518 Sum_probs=72.1
Q ss_pred HHHHHHHHHHhhCCCC-c-ceecCCCCCcchhhHHHHHHHhcCCCCCCccc---CcCCHHHHHHHHHHHHHhcCCCCCC-
Q psy7817 140 AKKTLLRWVSNALPEH-I-KVSDFGPSWRDGHAFLSVIDNIQKDLVDIPAL---SKQTNRHRLDTAFNVAESNLGIARL- 213 (228)
Q Consensus 140 ~~~~Ll~Wv~~~l~~~-~-~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~---~~~~~~~n~~~a~~~A~~~lgip~l- 213 (228)
.++.+++|+|.++..+ . .++||.++|+||++||+|++.+.|+.++.... ......+|++.+++.|+ ++|||..
T Consensus 2 ~~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~Ll~~~~p~~~~~~~~~~~~~~~~~~Ni~~~l~~~~-~~gi~~~~ 80 (107)
T cd00014 2 QKEELLRWINKVLGEYGPVTINNFSTDLKDGIALCKLLNSLSPDLIDKKKINPLSRFKRLENINLALNFAE-KLGVPVVN 80 (107)
T ss_pred hHHHHHHHHHHHhccCCCccHHHHHHHHhchHHHHHHHHHHCccccccccccccchhhHHHHHHHHHHHHH-HcCCceec
Confidence 4689999999999988 3 79999999999999999999999999877653 44567899999999999 5999998
Q ss_pred CChhhhcc
Q psy7817 214 LDPEVRQF 221 (228)
Q Consensus 214 l~p~Di~~ 221 (228)
++|+|++.
T Consensus 81 ~~~~Dl~~ 88 (107)
T cd00014 81 FDAEDLVE 88 (107)
T ss_pred cCHHHHhh
Confidence 99999994
No 13
>smart00033 CH Calponin homology domain. Actin binding domains present in duplicate at the N-termini of spectrin-like proteins (including dystrophin, alpha-actinin). These domains cross-link actin filaments into bundles and networks. A calponin homology domain is predicted in yeasst Cdc24p.
Probab=99.42 E-value=1e-13 Score=100.21 Aligned_cols=82 Identities=28% Similarity=0.388 Sum_probs=70.6
Q ss_pred HHHHHHHHHhhCCCC--cceecCCCCCcchhhHHHHHHHhcCCCCCCcccC----cCCHHHHHHHHHHHHHhcCCC-CCC
Q psy7817 141 KKTLLRWVSNALPEH--IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALS----KQTNRHRLDTAFNVAESNLGI-ARL 213 (228)
Q Consensus 141 ~~~Ll~Wv~~~l~~~--~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~----~~~~~~n~~~a~~~A~~~lgi-p~l 213 (228)
++.+++|+|.++..+ ..++||.++|+||.+||+|++.+.|+.++..... .....+|++.+++.|++. |+ +..
T Consensus 2 ~~~l~~Win~~l~~~~~~~v~~~~~~l~dG~~L~~L~~~l~p~~i~~~~~~~~~~~~~~~~Ni~~~l~~~~~~-g~~~~~ 80 (103)
T smart00033 2 EKTLLRWVNSLLAEYGKPPVTNFSSDLSDGVALCKLLNSLSPGSVDKKKVNASLSRFKKIENINLALSFAEKL-GGKLVL 80 (103)
T ss_pred hHHHHHHHHHHcccCCCCcHHHHHHHHccHHHHHHHHHHHCCCcCChhhccccccHHHHHHhHHHHHHHHHHc-CCeeec
Confidence 578999999999986 6889999999999999999999999998876554 224579999999999955 65 779
Q ss_pred CChhhhcccC
Q psy7817 214 LDPEVRQFLF 223 (228)
Q Consensus 214 l~p~Di~~~~ 223 (228)
++|+||+...
T Consensus 81 ~~~~Dl~~~~ 90 (103)
T smart00033 81 FEPEDLVEGN 90 (103)
T ss_pred cCHHHHhhcc
Confidence 9999999854
No 14
>KOG3631|consensus
Probab=99.40 E-value=7.1e-13 Score=108.88 Aligned_cols=106 Identities=18% Similarity=0.338 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCc--CCCCCCccchhhhHHHHHHHHHhCCc
Q psy7817 4 RVQKKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVE--KGRNLRRPHFLSNANTALQFLQSKRI 81 (228)
Q Consensus 4 ~~q~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~--~~~~~~~~~~i~N~~~~l~~~~~~g~ 81 (228)
.+-|+++..++|.||.+ .++.|.+|.+.|.||+.|.-|+..|.|--+|.. .-.|.+..++++|++.|++.|++-|.
T Consensus 256 n~VK~sli~FvNkhLnk--lnLeVt~LdtQFaDGV~LvLL~GlLEgyFvpL~~F~Ltp~S~eekv~NVsfAfeLm~D~GL 333 (365)
T KOG3631|consen 256 NVVKKSLITFVNKHLNK--LNLEVTELDTQFADGVYLVLLMGLLEGYFVPLHHFYLTPNSFEEKVHNVSFAFELMKDGGL 333 (365)
T ss_pred HHHHHHHHHHHHHHhhh--ccceeehhhhhhccchHHHHHHHhhccceeecceeecCCCCHHHHHHHHHHHHHHHHccCc
Confidence 45689999999999965 377899999999999999999999999887754 45677788999999999999999998
Q ss_pred eeeecCCCCccCCchhHHHHHHHHHHHHhh
Q psy7817 82 KLVNINSSDLVDGRPAVVLGLIWTIILYFQ 111 (228)
Q Consensus 82 ~~~~i~~~di~~g~~~~iL~llw~li~~~~ 111 (228)
.-...+|+||++++.|++|++++.++.+|.
T Consensus 334 ~kp~~rpeDIvN~D~KSTLRvLy~LFtKyk 363 (365)
T KOG3631|consen 334 EKPKVRPEDIVNKDLKSTLRVLYNLFTKYK 363 (365)
T ss_pred CCCCCChHHhhcccHHHHHHHHHHHHHhhc
Confidence 888899999999999999999999998874
No 15
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=99.27 E-value=2.6e-12 Score=89.77 Aligned_cols=76 Identities=21% Similarity=0.319 Sum_probs=64.1
Q ss_pred HHHhhCCCC-cceecCCCCCcchhhHHHHHHHhcCCCCCCcccCc------CCHHHHHHHHHHHHHhcCCCCC-CCChhh
Q psy7817 147 WVSNALPEH-IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSK------QTNRHRLDTAFNVAESNLGIAR-LLDPEV 218 (228)
Q Consensus 147 Wv~~~l~~~-~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~------~~~~~n~~~a~~~A~~~lgip~-ll~p~D 218 (228)
|++.....+ ..|.||+.||+||+++|+|||.|.|..++++.+.- .+...|++...+.+.++||... -++|||
T Consensus 1 ~~~~~~~~~~~~v~dl~~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~~ed 80 (85)
T PF11971_consen 1 WVNARCAPYFPPVEDLTQDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLEPED 80 (85)
T ss_pred CCCcccCCCCcchhhhhhhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCCHHH
Confidence 556555555 88999999999999999999999999999877753 2567899999999999998866 479999
Q ss_pred hccc
Q psy7817 219 RQFL 222 (228)
Q Consensus 219 i~~~ 222 (228)
+..+
T Consensus 81 l~~~ 84 (85)
T PF11971_consen 81 LLYV 84 (85)
T ss_pred HhcC
Confidence 9754
No 16
>KOG2046|consensus
Probab=98.68 E-value=8.9e-08 Score=75.88 Aligned_cols=87 Identities=18% Similarity=0.230 Sum_probs=66.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHhCCceeee
Q psy7817 6 QKKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQSKRIKLVN 85 (228)
Q Consensus 6 q~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~~g~~~~~ 85 (228)
..+....||-..... +...-.|+..-|+||++||+|+|+|.|+..+... .+...++.+||++..+.+++..|++-.+
T Consensus 26 ~~~el~~WI~~~~~~--~~~~~~~f~~~LKDG~iLCkl~N~l~p~~~~~~~-~s~~~f~qmEnIs~Fi~a~~~ygv~~~d 102 (193)
T KOG2046|consen 26 LEKELREWIENVVLT--ELPARGDFQDLLKDGVILCKLINKLYPGVVKKIN-ESKMAFVQMENISNFIKAAKKYGVPEVD 102 (193)
T ss_pred HHHHHHHHHHHhhcc--CCCcccCHHHHHcchHHHHHHHHHhCcCcccccc-cccccHHHHHHHHHHHHHHHhcCCChhh
Confidence 456689999997422 1222488999999999999999999995544332 4555899999999999999999988666
Q ss_pred cC-CCCccCCc
Q psy7817 86 IN-SSDLVDGR 95 (228)
Q Consensus 86 i~-~~di~~g~ 95 (228)
+- +-|+.+|.
T Consensus 103 ~FqtvDLfE~k 113 (193)
T KOG2046|consen 103 LFQTVDLFEGK 113 (193)
T ss_pred cccccccccCC
Confidence 44 45787764
No 17
>KOG0518|consensus
Probab=98.66 E-value=7.1e-11 Score=112.01 Aligned_cols=181 Identities=20% Similarity=0.196 Sum_probs=136.7
Q ss_pred CCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHhCCceeeecCCCCccCCchhHHHHH
Q psy7817 23 PPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQSKRIKLVNINSSDLVDGRPAVVLGL 102 (228)
Q Consensus 23 ~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~~g~~~~~i~~~di~~g~~~~iL~l 102 (228)
++..+.+|..++.||+.|..+++.+.......-+..-. -++..+|++.|++.....+...++|...+|++++.+.++++
T Consensus 42 aG~~~~slk~~~~dg~~~p~~v~vl~~~~~skv~~~~p-~~q~~~~v~~a~~~ft~d~r~~~nigs~hivd~v~~~~g~~ 120 (1113)
T KOG0518|consen 42 AGFYILSLKYDGSDGVNLPSLVQVLSAVDTSKVKKKGP-GIQGLHNVREALNKFTVDNRKETNIGSAHIVDHVVKLIGSL 120 (1113)
T ss_pred CcceeEEEEecCccccccceeeEEeeccccceeEEecC-CccCcchhhhhhhhhhhccceeeccCCcccccccccccccc
Confidence 46678899999999999999999998775543322222 26889999999999988778889999999999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHhhccCCCCCCCCCCcccccHHHHHHHHHHhhCCCCcceecCCCCCcchhhHHHHHHHhcCCC
Q psy7817 103 IWTIILYFQIEENTRALAALSAEGYTSPEPGKKDVESAKKTLLRWVSNALPEHIKVSDFGPSWRDGHAFLSVIDNIQKDL 182 (228)
Q Consensus 103 lw~li~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~~~l~~~~~I~nf~~s~~DG~~l~~Li~~~~p~~ 182 (228)
+|+++.+| .... . +... .+.+......+.++..|-...++. +.+.+|+++|.||+||-.++++-.|+.
T Consensus 121 ~~~~v~~~-~dg~------y-~~k~---~p~e~~~h~~e~~~~e~~~~~sP~-~~~v~~~td~n~~~Alg~~le~~~vg~ 188 (1113)
T KOG0518|consen 121 TWTLVQDY-GDGI------Y-KTKR---TPKEKGEHEVEVLYDEKPVPASPF-VVKVNEGTDWNDVQALGPGLESARVGK 188 (1113)
T ss_pred eeEeeecc-CCcc------e-eeec---CchhccchhhhhhhcccccccCCc-eeccccccCcccceEeccchhhcccCC
Confidence 99999887 1100 0 0000 011111123444556665555554 678999999999999999999999987
Q ss_pred C-CCcccCcCCHHHHHHHHHHHHHhcCCCCCCCCh
Q psy7817 183 V-DIPALSKQTNRHRLDTAFNVAESNLGIARLLDP 216 (228)
Q Consensus 183 ~-~~~~~~~~~~~~n~~~a~~~A~~~lgip~ll~p 216 (228)
. .+..........|+..|++.+.+.+-.++.+.|
T Consensus 189 p~~f~v~~~Ga~~gnl~~a~~gpse~~~~~~di~~ 223 (1113)
T KOG0518|consen 189 PNVFEVETPGAGQGNLEVAVEGPSEALTVIPDIKP 223 (1113)
T ss_pred CceeEEecCCccccceeeeecChhhhcccccccCC
Confidence 7 566666666678999999999987777777766
No 18
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=98.28 E-value=2.9e-06 Score=64.25 Aligned_cols=104 Identities=22% Similarity=0.305 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHhCCceee
Q psy7817 5 VQKKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQSKRIKLV 84 (228)
Q Consensus 5 ~q~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~~g~~~~ 84 (228)
.|.+..+-||-..|.+...| -.||.+.|+||++||++++...+..+.+...+. ++..++|+...|+++++.+++--
T Consensus 13 ~~~kev~~Wie~~l~~k~~p--pgdll~~lkdGv~lCril~ea~~~~I~yKeSkm--pFVQmenIs~Fin~~~k~~vpe~ 88 (178)
T COG5199 13 KQQKEVTLWIETVLGEKFEP--PGDLLSLLKDGVRLCRILNEASPLDIKYKESKM--PFVQMENISSFINGLKKLRVPEY 88 (178)
T ss_pred HHHHHHHHHHHHHHHhhhCC--cccHHHHHhcchHHHHHHhhcCcccceecccCC--ceeeHHHHHHHHHHHHHhCCCHH
Confidence 46677899999999655433 489999999999999999999888876655444 78999999999999999886521
Q ss_pred e-cCCCCccC-CchhHHHHHHHHHHHHhhh
Q psy7817 85 N-INSSDLVD-GRPAVVLGLIWTIILYFQI 112 (228)
Q Consensus 85 ~-i~~~di~~-g~~~~iL~llw~li~~~~i 112 (228)
. .--.|+.+ .|...++.-++++-++.+.
T Consensus 89 elFQT~DLFE~kd~~qV~~~l~slSRya~K 118 (178)
T COG5199 89 ELFQTNDLFEAKDLRQVVICLYSLSRYAQK 118 (178)
T ss_pred HHHHhhhHHhhcCHHHHHHHHHHHHHHHHH
Confidence 1 22334444 4667777778887765443
No 19
>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins.
Probab=98.12 E-value=1.4e-06 Score=60.85 Aligned_cols=69 Identities=29% Similarity=0.411 Sum_probs=58.0
Q ss_pred CCccchHHHhhhHHHHHHHHHHHcCCCCCCcC---CCCCCccchhhhHHHHHHHHHh-CCceeeecCCCCccC
Q psy7817 25 LRIDDLTEDLKDGTKLLALLEVLSNEKLPVEK---GRNLRRPHFLSNANTALQFLQS-KRIKLVNINSSDLVD 93 (228)
Q Consensus 25 ~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~---~~~~~~~~~i~N~~~~l~~~~~-~g~~~~~i~~~di~~ 93 (228)
..|.||..||+||+.||.|+....|+.++... ...++....+.|.....+|+.+ +|.+....+++|+..
T Consensus 11 ~~v~dl~~~l~DG~~Lc~Lih~Y~P~~l~~~~I~~~~~mS~~~~l~N~~ll~~~c~~~l~~~~~~l~~edl~~ 83 (85)
T PF11971_consen 11 PPVEDLTQDLSDGRALCALIHFYCPQLLPLEDICLKTTMSQADSLYNLQLLNSFCQSHLGFSCCHLEPEDLLY 83 (85)
T ss_pred cchhhhhhhhccHHHHHHHHHHhCcceecHhHcccccchHHHHhhhhHHHHHHHHHHHcCCCcCcCCHHHHhc
Confidence 35899999999999999999999999988652 3445678899999999999987 788777778888754
No 20
>KOG0516|consensus
Probab=97.63 E-value=2.1e-05 Score=78.50 Aligned_cols=108 Identities=38% Similarity=0.533 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCc---CCCCCCccchhhhHHHHHHHHHhC
Q psy7817 3 ERVQKKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVE---KGRNLRRPHFLSNANTALQFLQSK 79 (228)
Q Consensus 3 ~~~q~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~---~~~~~~~~~~i~N~~~~l~~~~~~ 79 (228)
..+|++.|..|++.++.+..+ .|+++++++++ ...+.+++...+...... .......++.+.|+..++.++++.
T Consensus 72 ~~~~k~~f~~~~~~~l~~~~~--~ve~~~~~l~~-~~~i~~l~~~e~~~~~~~~~~~~~~~~~~~~l~n~q~~l~~~k~~ 148 (1047)
T KOG0516|consen 72 DLVQKKLFPDWLAKELEKVMK--HVEDLYEDLRD-LNSISLLEVEELLVAVRKQEPEQDRQERLHDLENVQAALTALKED 148 (1047)
T ss_pred HHHHHhccchhhHHHHHHhcc--chhHHhhhhhh-hhHHHHHHHHHhhhhhhhhhHHHHHHHHHhhHHHHHhhhccchHH
Confidence 468999999999999987654 48999999985 444444444443322211 112223667899999999999999
Q ss_pred Cceeee--cCCCCccCCchhHHHHHHHHHHHHhhhh
Q psy7817 80 RIKLVN--INSSDLVDGRPAVVLGLIWTIILYFQIE 113 (228)
Q Consensus 80 g~~~~~--i~~~di~~g~~~~iL~llw~li~~~~i~ 113 (228)
.+.+++ +..++|..|+.+.+++++|.++.+|+..
T Consensus 149 ~~el~~~~~~~~~~~~~~~~~~l~~~~ei~l~~Q~~ 184 (1047)
T KOG0516|consen 149 LAELVNFLIRDAEIKLGNPELGLGLIWEIILHFQYV 184 (1047)
T ss_pred HHHHHHhhcccchhhccchhhhhhhHHHHHHHHHHH
Confidence 999989 9999999999999999999999999874
No 21
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=97.58 E-value=7.2e-05 Score=58.46 Aligned_cols=96 Identities=17% Similarity=0.270 Sum_probs=67.9
Q ss_pred HHHHHh-hhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCc-CCCCCCccchhhhHHHH-HHHHHhCCceeeecC
Q psy7817 11 VNWINS-YLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVE-KGRNLRRPHFLSNANTA-LQFLQSKRIKLVNIN 87 (228)
Q Consensus 11 ~~WiN~-~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~-~~~~~~~~~~i~N~~~~-l~~~~~~g~~~~~i~ 87 (228)
.+|+++ .| ...+.++..||.||+.+++++....|..+... .....+...++.|-... -.++++.|+++..-.
T Consensus 2 ~~WL~~l~l-----s~~~~n~~rDfsdG~lvAEIl~~y~p~~vdlh~y~~~~s~~~Kl~NW~~Ln~kvl~kl~~~l~~~~ 76 (158)
T PF06294_consen 2 LKWLQSLDL-----SRPPKNIRRDFSDGYLVAEILSRYYPKLVDLHNYSNGNSVAQKLNNWETLNEKVLKKLGIKLDKED 76 (158)
T ss_dssp HHHHHHS-------S--SS-HHHHHTTSHHHHHHHHHH-TTT---SS----SSHHHHHHHHHHHHHHTTGGGT----HHH
T ss_pred hHHHhcCCC-----CCCCCchHHHcccccHHHHHHHHHCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 589999 22 23468999999999999999999999876643 23333467899999988 889999999877666
Q ss_pred CCCccCCchhHHHHHHHHHHHHhh
Q psy7817 88 SSDLVDGRPAVVLGLIWTIILYFQ 111 (228)
Q Consensus 88 ~~di~~g~~~~iL~llw~li~~~~ 111 (228)
.++++.|.+.++-.|+++|+..++
T Consensus 77 i~~i~~~~~Gaae~lL~~L~~~l~ 100 (158)
T PF06294_consen 77 IEGIINCKPGAAESLLYQLYTKLT 100 (158)
T ss_dssp HHHHHTT-TTTTHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHH
Confidence 778999999999999999998773
No 22
>KOG0035|consensus
Probab=97.34 E-value=0.00013 Score=69.97 Aligned_cols=211 Identities=15% Similarity=0.169 Sum_probs=139.4
Q ss_pred HHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHh-CCceeeec
Q psy7817 8 KTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQS-KRIKLVNI 86 (228)
Q Consensus 8 ~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~-~g~~~~~i 86 (228)
....-|....-. .+....|.+|.+.++||..+|.+++.-.+.-++.+... +...+++|++.|.+.+.. .|++-. +
T Consensus 145 egllLwcq~~Ta-~y~~v~v~nF~~sw~~gl~f~A~ih~~Rpdli~~y~~l--t~~~~~~n~~~A~~iAek~l~i~r~-l 220 (890)
T KOG0035|consen 145 EGLLLWCQRKTA-PYSNVNVQNFHTSWKDGLAFCALIHRHRPDLIDQYDKL--TKQDPVENLNLAFDIAEKFLGIPRL-L 220 (890)
T ss_pred hhhhhheecccC-CccccccccceecccchHHHHHHHHhcChhhhhhhhhc--CccchhHHhhhhhhhhhhcCCcccc-c
Confidence 344556555543 22345689999999999999999999888877733222 245679999999999988 888743 8
Q ss_pred CCCCccCC---chhHHHHHHHHHHHHhhhhh------------------hhH---HHHhh--------------------
Q psy7817 87 NSSDLVDG---RPAVVLGLIWTIILYFQIEE------------------NTR---ALAAL-------------------- 122 (228)
Q Consensus 87 ~~~di~~g---~~~~iL~llw~li~~~~i~~------------------~~~---~~~~l-------------------- 122 (228)
.++|+++- +.+.|+.-+-+....|.-.. +.. ....+
T Consensus 221 d~ed~~~~~~pde~aimtyv~~~~~~fSg~~~~~t~~n~i~s~~av~qe~~~~~e~~e~~~s~~l~~~~~~~P~l~~r~~ 300 (890)
T KOG0035|consen 221 DAEDIVEAAIPDEKAIMTYVSSYYHAFSGAEAAETAANRICSVLAVNQEKETTMEEYETLASELLEWIARRTPWLQNRVT 300 (890)
T ss_pred CccccccCCCCchhhhhhhhhhccccccCcchhhhhcccccchhhccccccchHHHHHHHhhhhhhHHHhcCcccccccc
Confidence 99999876 33566665655554443000 000 00000
Q ss_pred --------------c--------cC----C------------------CC-------------C----------------
Q psy7817 123 --------------S--------AE----G------------------YT-------------S---------------- 129 (228)
Q Consensus 123 --------------~--------~~----~------------------~~-------------~---------------- 129 (228)
. .+ + .. .
T Consensus 301 ~~~~~~~q~~l~~~rd~~~r~~~~e~~v~~~~~~~~~~st~q~k~~~~~~p~~~~s~~~~~S~~~~~~~~le~~~~~~e~ 380 (890)
T KOG0035|consen 301 DSVGAKAQRKLEFSRDAVYRRLEKEPLVEDKGRLESGFSTLQTKLRLESRPAKLASSGVLVSDINDAWQGLEQAEKLYEE 380 (890)
T ss_pred cchhhhhccccccccccccccccccccccccccccccchhhhhhhhhhcccccCcccccccccccccccchhhhcccccc
Confidence 0 00 0 00 0
Q ss_pred ----------------------CCCCCcc---------cccHHHHHHHHHHhhCCCC--cceecCCCCCcchhhHHHHHH
Q psy7817 130 ----------------------PEPGKKD---------VESAKKTLLRWVSNALPEH--IKVSDFGPSWRDGHAFLSVID 176 (228)
Q Consensus 130 ----------------------~~~~~~~---------~~~~~~~Ll~Wv~~~l~~~--~~I~nf~~s~~DG~~l~~Li~ 176 (228)
....... .......|+.||...+..| +.++++ .+|..|.++|+|++
T Consensus 381 ~ll~~~~~l~~~~~~~~~f~~~~s~~~~~~pg~e~~l~~~d~~~~lle~~ke~~~~~ea~~~~~~-~~~~~~e~~~ai~~ 459 (890)
T KOG0035|consen 381 SLLAEIRRLERLEHLASKFSQKASLHESWTPGKEQVLFLNDYGQALLEECKELTKKHEAFESDLS-AHQDNVEAFCAIAH 459 (890)
T ss_pred cchhhhHHHhhhhhhhhhccccCchhhhhccchhhhhhhcchHHHHHHHHHhhcccccccccchh-hhhcchhHHHHHHH
Confidence 0000000 0013346789999998888 888888 99999999999999
Q ss_pred HhcCCCCCCcccCcCCHHHHHHHHHHHHHhcCCCCCCCChhhhcccCCCCC
Q psy7817 177 NIQKDLVDIPALSKQTNRHRLDTAFNVAESNLGIARLLDPEVRQFLFLHVK 227 (228)
Q Consensus 177 ~~~p~~~~~~~~~~~~~~~n~~~a~~~A~~~lgip~ll~p~Di~~~~~~~~ 227 (228)
.|.|..+++......+..+++...++.+. + ++.+.|.++....+..|
T Consensus 460 ~~~~~~~~~~~~~a~~~q~i~dq~~~~~~--l--s~~r~pal~~~~~~~dk 506 (890)
T KOG0035|consen 460 ELNELLYDDAKLVAADCQHICDQWDDLGQ--L--SRKRRPALMQMEKVLDK 506 (890)
T ss_pred Hhhhhhhhhhhhhhhhhhhccccccccch--h--hhhhchhhhhhhhhhHH
Confidence 99999888888777777777777777776 2 77777777776655543
No 23
>PF06294 DUF1042: Domain of Unknown Function (DUF1042); InterPro: IPR010441 This is a family of proteins of unknown function.; PDB: 2EE7_A.
Probab=97.14 E-value=0.00018 Score=56.18 Aligned_cols=73 Identities=25% Similarity=0.378 Sum_probs=42.2
Q ss_pred HHHHHHhhCCCCcceecCCCCCcchhhHHHHHHHhcCCCCCCcccCcCC----HHHHHHHH-HHHHHhcCCCCCCCChhh
Q psy7817 144 LLRWVSNALPEHIKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSKQT----NRHRLDTA-FNVAESNLGIARLLDPEV 218 (228)
Q Consensus 144 Ll~Wv~~~l~~~~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~~~----~~~n~~~a-~~~A~~~lgip~ll~p~D 218 (228)
|++|++. +....+..|+..||+||..++.|++.|.|..+|+..+.+.. +..|.+.- ..... ++|++ ++.++
T Consensus 1 l~~WL~~-l~ls~~~~n~~rDfsdG~lvAEIl~~y~p~~vdlh~y~~~~s~~~Kl~NW~~Ln~kvl~-kl~~~--l~~~~ 76 (158)
T PF06294_consen 1 LLKWLQS-LDLSRPPKNIRRDFSDGYLVAEILSRYYPKLVDLHNYSNGNSVAQKLNNWETLNEKVLK-KLGIK--LDKED 76 (158)
T ss_dssp HHHHHHH-S--S--SS-HHHHHTTSHHHHHHHHHH-TTT---SS----SSHHHHHHHHHHHHHHTTG-GGT------HHH
T ss_pred ChHHHhc-CCCCCCCCchHHHcccccHHHHHHHHHCCCCccccccCCCCCHHHHHHHHHHHHHHHHH-HcCCC--CCHHH
Confidence 5799998 33335788888999999999999999999999988876653 34565555 44444 78875 56654
Q ss_pred hc
Q psy7817 219 RQ 220 (228)
Q Consensus 219 i~ 220 (228)
|.
T Consensus 77 i~ 78 (158)
T PF06294_consen 77 IE 78 (158)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 24
>KOG0517|consensus
Probab=96.88 E-value=0.027 Score=57.91 Aligned_cols=194 Identities=15% Similarity=0.208 Sum_probs=119.2
Q ss_pred HHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHh-CCceeee
Q psy7817 7 KKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQS-KRIKLVN 85 (228)
Q Consensus 7 ~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~-~g~~~~~ 85 (228)
|.++.-|++-.-+ .+|+..|.||.++++||.-+-.||.+=.|.-+.+.+.+ +...+.|++.|++.+.. +|+.- -
T Consensus 169 KDALLLWCQmKTA-GYpnVNI~nFTtSWRdGLaFNALIHkHRPDLvDf~~L~---k~na~~NL~~AFdvAE~~LGia~-L 243 (2473)
T KOG0517|consen 169 KDALLLWCQMKTA-GYPNVNITNFTTSWRDGLAFNALIHKHRPDLVDFDKLK---KSNALYNLQHAFDVAEQELGIAK-L 243 (2473)
T ss_pred HHHHHHHHHhhcc-CCCCcccccCccchhcchhHHHHHHhcCcchhhhcccC---CCchhhHHHHHHHHHHHHcCchh-c
Confidence 5678999998876 46888999999999999999999998777766654444 34558999999999976 99874 3
Q ss_pred cCCCCccCC--chhHHHHHHHHHHHHhhhhh--------hhHHHHhhccCCCCCCCCCCcccccHHHHHHHHHHhhCCCC
Q psy7817 86 INSSDLVDG--RPAVVLGLIWTIILYFQIEE--------NTRALAALSAEGYTSPEPGKKDVESAKKTLLRWVSNALPEH 155 (228)
Q Consensus 86 i~~~di~~g--~~~~iL~llw~li~~~~i~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~~~l~~~ 155 (228)
..|+|+.-. +.|+|+.-+-+++-||.--. +...+..+...+.- .. ....-...||.|+...+..
T Consensus 244 LDpEDV~v~~PDEKSIITYV~~YYHyFsKmK~~~v~gKRIgkVl~~lme~ekm---~~--~YE~LasdLL~WI~~ti~~- 317 (2473)
T KOG0517|consen 244 LDPEDVNVEQPDEKSIITYVVTYYHYFSKMKQLAVEGKRIGKVLDQLMETEKM---IE--QYEGLASDLLEWIEQTIQT- 317 (2473)
T ss_pred CCHhhcCccCCCcchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH---HH--HHHHHHHHHHHHHHHHHHH-
Confidence 899988765 55899988887776663210 01111111111000 00 1112345899999877644
Q ss_pred cceecCCCCCcchhhHHHHHHHhcCCCCCCcccCcCCHHHHHHHHHHHHHhcCCCCC
Q psy7817 156 IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSKQTNRHRLDTAFNVAESNLGIAR 212 (228)
Q Consensus 156 ~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~~~~~~n~~~a~~~A~~~lgip~ 212 (228)
+.=..|-.|..-=.-..+-++.|+-.- .+.++.+..+.+-+=+-+..+-+..+=++
T Consensus 318 L~~R~f~NSL~GvqqqL~aF~~yRT~E-KPPKf~EKG~lEvLlFtiQsklrA~Nqk~ 373 (2473)
T KOG0517|consen 318 LESRKFPNSLEGVQQQLAAFNTYRTVE-KPPKFQEKGNLEVLLFTIQSKLRANNQKP 373 (2473)
T ss_pred HhhccCccchHHHHHHHHHHHhhhccc-CCCccccccchHHHHHHHHHHHHHcCCCC
Confidence 334566655544344555556665321 22333444444444444444443333333
No 25
>KOG0532|consensus
Probab=96.78 E-value=0.0012 Score=60.76 Aligned_cols=70 Identities=17% Similarity=0.184 Sum_probs=55.0
Q ss_pred cchHHHhhhHHHHHHHHHHHcCCCCCCcC-----CCCCCccchhhhHHHHHHHHHhCCceeee-cCCCCccCCchh
Q psy7817 28 DDLTEDLKDGTKLLALLEVLSNEKLPVEK-----GRNLRRPHFLSNANTALQFLQSKRIKLVN-INSSDLVDGRPA 97 (228)
Q Consensus 28 ~dl~~dl~DGv~L~~Lle~l~~~~~~~~~-----~~~~~~~~~i~N~~~~l~~~~~~g~~~~~-i~~~di~~g~~~ 97 (228)
.||..+|.|||+||+|+|.+.|..++... ....+......||.-.|++|++.|++-.. +++.||+.+...
T Consensus 595 ~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLeaCRkiGVpEa~lCS~~Dilq~~~r 670 (722)
T KOG0532|consen 595 EDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLEACRKIGVPEADLCSPMDILQKIER 670 (722)
T ss_pred hhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHHHHHHcCCChHhhcCHHHhhhhhcc
Confidence 78999999999999999999998765432 22233456678999999999999988443 778899877543
No 26
>KOG2996|consensus
Probab=96.33 E-value=0.0075 Score=55.45 Aligned_cols=83 Identities=23% Similarity=0.311 Sum_probs=61.7
Q ss_pred HHHHHHHhhhccCCC--------CCCccchHHHhhhHHHHHHHHHHHcCCCCCCc---CCCCCCccchhhhHHHHHHHHH
Q psy7817 9 TFVNWINSYLSKRHP--------PLRIDDLTEDLKDGTKLLALLEVLSNEKLPVE---KGRNLRRPHFLSNANTALQFLQ 77 (228)
Q Consensus 9 ~~~~WiN~~L~~~~~--------~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~---~~~~~~~~~~i~N~~~~l~~~~ 77 (228)
-..+|+-..- ..| ...|-+|...|+|||+||+|++.|.|..+... ....++++-.+.|+...+.++.
T Consensus 6 qCarWLidck--VLptnhrvtw~~a~v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~ 83 (865)
T KOG2996|consen 6 QCARWLIDCK--VLPTNHRVTWDSAQVFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCC 83 (865)
T ss_pred HHHHHHhhcc--ccCCCcccccCcchHHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHH
Confidence 3677875542 223 23478999999999999999999999887643 3445568888999999999998
Q ss_pred h-CCceeee-cCCCCccC
Q psy7817 78 S-KRIKLVN-INSSDLVD 93 (228)
Q Consensus 78 ~-~g~~~~~-i~~~di~~ 93 (228)
. .|..-.. ..|.|+.+
T Consensus 84 ~~Fglr~seLF~afDLfd 101 (865)
T KOG2996|consen 84 EKFGLRDSELFEAFDLFD 101 (865)
T ss_pred HHhCCchhhhcchhhhhh
Confidence 7 7765332 56777765
No 27
>KOG2046|consensus
Probab=95.87 E-value=0.015 Score=46.52 Aligned_cols=73 Identities=16% Similarity=0.317 Sum_probs=52.9
Q ss_pred cHHHHHHHHHHhhCCCCcc-eecCCCCCcchhhHHHHHHHhcCCCCCCc--ccCcCCHHHHHHHHHHHHHhcCCCCC
Q psy7817 139 SAKKTLLRWVSNALPEHIK-VSDFGPSWRDGHAFLSVIDNIQKDLVDIP--ALSKQTNRHRLDTAFNVAESNLGIAR 212 (228)
Q Consensus 139 ~~~~~Ll~Wv~~~l~~~~~-I~nf~~s~~DG~~l~~Li~~~~p~~~~~~--~~~~~~~~~n~~~a~~~A~~~lgip~ 212 (228)
..+..|+.|+...+....+ =.||..-+.||.+||.|++.+.|+..... ....-...+|+..-+..|+ ++|++.
T Consensus 25 ~~~~el~~WI~~~~~~~~~~~~~f~~~LKDG~iLCkl~N~l~p~~~~~~~~s~~~f~qmEnIs~Fi~a~~-~ygv~~ 100 (193)
T KOG2046|consen 25 ELEKELREWIENVVLTELPARGDFQDLLKDGVILCKLINKLYPGVVKKINESKMAFVQMENISNFIKAAK-KYGVPE 100 (193)
T ss_pred HHHHHHHHHHHHhhccCCCcccCHHHHHcchHHHHHHHHHhCcCcccccccccccHHHHHHHHHHHHHHH-hcCCCh
Confidence 4677899999885322223 47999999999999999999999554333 2222234588888887776 899986
No 28
>KOG0532|consensus
Probab=94.38 E-value=0.03 Score=51.92 Aligned_cols=86 Identities=17% Similarity=0.281 Sum_probs=60.8
Q ss_pred ccccHHHHHHHHHHhhCCCCcce---ecCCCCCcchhhHHHHHHHhcCCCC-----CCcccC---cCCHHHHHHHHHHHH
Q psy7817 136 DVESAKKTLLRWVSNALPEHIKV---SDFGPSWRDGHAFLSVIDNIQKDLV-----DIPALS---KQTNRHRLDTAFNVA 204 (228)
Q Consensus 136 ~~~~~~~~Ll~Wv~~~l~~~~~I---~nf~~s~~DG~~l~~Li~~~~p~~~-----~~~~~~---~~~~~~n~~~a~~~A 204 (228)
..+..+..|+.=.+.+++-.+.+ .||+.-..||++||+|+++++|..+ +-.++. ......|++--++.-
T Consensus 569 ~q~~eE~eL~~QLRk~iEtRLk~sLp~Dl~aALtDGViLChLaN~lRPRSV~SIHVPSPaV~klsmarcrrNVdnFLeaC 648 (722)
T KOG0532|consen 569 IQNREEKELMLQLRKLIETRLKVSLPEDLAAALTDGVILCHLANHLRPRSVASIHVPSPAVPKLSMARCRRNVDNFLEAC 648 (722)
T ss_pred ccchHHHHHHHHHHHHHHHHhcccCchhHHHHhhcchhhHhhhcccCCCCccceecCCCccchhHHHHHHHhHHHHHHHH
Confidence 44456667777666666543222 5899999999999999999999544 222332 223456777777766
Q ss_pred HhcCCCCC--CCChhhhccc
Q psy7817 205 ESNLGIAR--LLDPEVRQFL 222 (228)
Q Consensus 205 ~~~lgip~--ll~p~Di~~~ 222 (228)
+ ++|||. +=.|.||+..
T Consensus 649 R-kiGVpEa~lCS~~Dilq~ 667 (722)
T KOG0532|consen 649 R-KIGVPEADLCSPMDILQK 667 (722)
T ss_pred H-HcCCChHhhcCHHHhhhh
Confidence 6 999997 7889999865
No 29
>KOG2128|consensus
Probab=94.37 E-value=0.078 Score=53.37 Aligned_cols=83 Identities=22% Similarity=0.320 Sum_probs=63.4
Q ss_pred HHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHhCCceeeecCC-
Q psy7817 10 FVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQSKRIKLVNINS- 88 (228)
Q Consensus 10 ~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~~g~~~~~i~~- 88 (228)
-.+||-..|....|| -.+|.+.|++||.|.+|-+..+|..........-..+..-.|++.-++++...|++-. ..|
T Consensus 47 ~k~W~e~cl~edL~p--ttele~~LRNGV~LAkL~~~f~PD~~~~~~~~~~~~frHtdNi~q~~~~me~iglP~i-F~~E 123 (1401)
T KOG2128|consen 47 AKRWIEECLGEDLPP--TTELEEGLRNGVYLAKLGQFFAPDLEQTIYKANDLHFRHTDNINQWLRAMESIGLPEI-FYPE 123 (1401)
T ss_pred HHHHHHHHhcccCCC--chHHHHHhhhhhHHHHHHhhcCCcceeeeeecCCceeecchhHHHHHHHHhhcCCCcc-cccc
Confidence 468999999877666 5889999999999999999999854322111111246778899999999999998743 344
Q ss_pred -CCccCCc
Q psy7817 89 -SDLVDGR 95 (228)
Q Consensus 89 -~di~~g~ 95 (228)
.||++|.
T Consensus 124 ~~Dvy~~k 131 (1401)
T KOG2128|consen 124 TTDVYEGK 131 (1401)
T ss_pred hhhhhcCC
Confidence 4999985
No 30
>KOG2996|consensus
Probab=91.72 E-value=0.078 Score=49.03 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=53.5
Q ss_pred eecCCCCCcchhhHHHHHHHhcCCCCCCcccCcC------CHHHHHHHHHHHHHhcCCCCC--CCChhhhccc
Q psy7817 158 VSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSKQ------TNRHRLDTAFNVAESNLGIAR--LLDPEVRQFL 222 (228)
Q Consensus 158 I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~~------~~~~n~~~a~~~A~~~lgip~--ll~p~Di~~~ 222 (228)
|-+|.+-.+||+.||.|+|.+.|+.+|...++-. =...|+..-+..-.+++|... +.+|.|.-.+
T Consensus 30 v~dlAq~LRDGvLLCqLlnnL~p~sIdlkeIn~rpQmSqFLClkNIrtFl~~C~~~Fglr~seLF~afDLfdv 102 (865)
T KOG2996|consen 30 VFDLAQALRDGVLLCQLLNNLVPHSIDLKEINLRPQMSQFLCLKNIRTFLMFCCEKFGLRDSELFEAFDLFDV 102 (865)
T ss_pred HHHHHHHHhhhhHHHHHHhhcCCCcccHHHhhcCCCccchhhHhhHHHHHHHHHHHhCCchhhhcchhhhhhh
Confidence 4567788999999999999999999998877533 135888888888888999976 8999987544
No 31
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=87.50 E-value=1.2 Score=43.18 Aligned_cols=67 Identities=21% Similarity=0.288 Sum_probs=41.1
Q ss_pred HHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCc---C--CCC-CCccchhhhHHHHHHHHHh
Q psy7817 7 KKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVE---K--GRN-LRRPHFLSNANTALQFLQS 78 (228)
Q Consensus 7 ~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~---~--~~~-~~~~~~i~N~~~~l~~~~~ 78 (228)
..+++.|||..- . +..+.+ +.||.||++|..++..+-|..+... + ..+ .+..-++.|+...+..++.
T Consensus 9 ~~~Lv~Wv~tf~---~-~~~~~~-~~dL~DGv~L~evL~qIDp~~F~~~~l~~i~~~~~~nw~lr~~NLk~l~~~i~~ 81 (713)
T PF05622_consen 9 CDSLVTWVQTFN---L-SAPCSS-YEDLSDGVALAEVLHQIDPEYFNDSWLSRIKEDVGDNWRLRVSNLKKLLRNIKS 81 (713)
T ss_dssp HHHHHHHHTT-------SS---S-HHHHTTSHHHHHHHHHH-TTTS-HHHHTT--SGGGG-SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC---C-CCCcCC-HHHccchHHHHHHHHHhCccccCcHHhhcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 467999999952 1 222444 4899999999999999998865421 1 111 1223468888888766655
No 32
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=86.97 E-value=0.99 Score=43.75 Aligned_cols=83 Identities=16% Similarity=0.207 Sum_probs=62.0
Q ss_pred HHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCCCCccchhhhHHHHHHHHHhCCcee-eecCC
Q psy7817 10 FVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRNLRRPHFLSNANTALQFLQSKRIKL-VNINS 88 (228)
Q Consensus 10 ~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~i~N~~~~l~~~~~~g~~~-~~i~~ 88 (228)
-..||-..+....| -.-+.+.|+.||.|..|.+...|..+..-.....-++..-.|++..+++....|++- -...-
T Consensus 49 aK~WIee~~~~~l~---~~~fe~slRnGV~La~l~q~f~pd~~~~iF~~~~LQfrHtdNIN~Fld~i~~vGlPe~FhFEl 125 (1054)
T COG5261 49 AKIWIEEVIEEALP---ELCFEDSLRNGVFLAKLTQRFNPDLTTVIFPADKLQFRHTDNINAFLDLIEHVGLPESFHFEL 125 (1054)
T ss_pred HHHHHHHHhccCCc---hhhHHHHHhccchHHHHHHHhCCCceeEeeecccceeeccccHHHHHhHhhhcCCcceeeeeh
Confidence 35799999965433 456778899999999999999987654332222236777889999999999999873 23557
Q ss_pred CCccCCc
Q psy7817 89 SDLVDGR 95 (228)
Q Consensus 89 ~di~~g~ 95 (228)
.|+++|.
T Consensus 126 ~DlYekK 132 (1054)
T COG5261 126 QDLYEKK 132 (1054)
T ss_pred HhhhccC
Confidence 7999875
No 33
>COG5199 SCP1 Calponin [Cytoskeleton]
Probab=86.47 E-value=0.91 Score=34.86 Aligned_cols=73 Identities=12% Similarity=0.204 Sum_probs=54.9
Q ss_pred cHHHHHHHHHHhhCCCC-cceecCCCCCcchhhHHHHHHHhcCCCCCCcccCcC-CHHHHHHHHHHHHHhcCCCCC
Q psy7817 139 SAKKTLLRWVSNALPEH-IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSKQ-TNRHRLDTAFNVAESNLGIAR 212 (228)
Q Consensus 139 ~~~~~Ll~Wv~~~l~~~-~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~~-~~~~n~~~a~~~A~~~lgip~ 212 (228)
...+-..-|+-..+... -+=-+|-+.+.||+.||.+++.-.|.-+.|..-..- -..+|+..-+..+. ++++|.
T Consensus 13 ~~~kev~~Wie~~l~~k~~ppgdll~~lkdGv~lCril~ea~~~~I~yKeSkmpFVQmenIs~Fin~~~-k~~vpe 87 (178)
T COG5199 13 KQQKEVTLWIETVLGEKFEPPGDLLSLLKDGVRLCRILNEASPLDIKYKESKMPFVQMENISSFINGLK-KLRVPE 87 (178)
T ss_pred HHHHHHHHHHHHHHHhhhCCcccHHHHHhcchHHHHHHhhcCcccceecccCCceeeHHHHHHHHHHHH-HhCCCH
Confidence 35667788998888753 222466689999999999999999988877654322 23578888899998 898874
No 34
>KOG3000|consensus
Probab=84.67 E-value=2.6 Score=36.24 Aligned_cols=90 Identities=20% Similarity=0.337 Sum_probs=65.4
Q ss_pred HHHHHHHHHhhhccCCCCCCccchHHHhhhHHHHHHHHHHHcCCCCCCcCCCC--CCccchhhhHHHHHHHHHhCCceee
Q psy7817 7 KKTFVNWINSYLSKRHPPLRIDDLTEDLKDGTKLLALLEVLSNEKLPVEKGRN--LRRPHFLSNANTALQFLQSKRIKLV 84 (228)
Q Consensus 7 ~~~~~~WiN~~L~~~~~~~~v~dl~~dl~DGv~L~~Lle~l~~~~~~~~~~~~--~~~~~~i~N~~~~l~~~~~~g~~~~ 84 (228)
+..+..|+|..|.-. -. -.+++..|-..|.|+.-+.+..++..+.+- ......+.|....=...++.|+.-+
T Consensus 17 R~E~laW~N~~l~~n-----~~-kIEe~~tGaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk~lQ~~f~klgi~k~ 90 (295)
T KOG3000|consen 17 RLEILAWINDLLQLN-----LT-KIEELCTGAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFKVLQTCFNKLGIDKV 90 (295)
T ss_pred hHHHHHHHHhhhhcc-----hh-hhhhhcccchhhhhhhhccCCccccccccccccccchhhhhhHHHHHHHHhcCCccc
Confidence 556899999999322 12 236778899999999999999888764432 1233456676665566677898865
Q ss_pred ecCCCCccCCchhHHHHHH
Q psy7817 85 NINSSDLVDGRPAVVLGLI 103 (228)
Q Consensus 85 ~i~~~di~~g~~~~iL~ll 103 (228)
|.+++++.|..--.|-++
T Consensus 91 -v~vdkLvKg~~qDNlEF~ 108 (295)
T KOG3000|consen 91 -VDVDKLVKGPFQDNLEFL 108 (295)
T ss_pred -ccHHHHhcccccchHHHH
Confidence 899999999887777754
No 35
>KOG3000|consensus
Probab=82.37 E-value=2.7 Score=36.14 Aligned_cols=80 Identities=14% Similarity=0.245 Sum_probs=57.7
Q ss_pred cHHHHHHHHHHhhCCCC-cceecCCCCCcchhhHHHHHHHhcCCCCCCcccCc-----CCHHHHHHHHHHHHHhcCCCCC
Q psy7817 139 SAKKTLLRWVSNALPEH-IKVSDFGPSWRDGHAFLSVIDNIQKDLVDIPALSK-----QTNRHRLDTAFNVAESNLGIAR 212 (228)
Q Consensus 139 ~~~~~Ll~Wv~~~l~~~-~~I~nf~~s~~DG~~l~~Li~~~~p~~~~~~~~~~-----~~~~~n~~~a~~~A~~~lgip~ 212 (228)
.....++.|+|..+... .+|. +..-|-|+|.|.+.+.|+.+++..+.- -..+.|.+ .++.+..++||.+
T Consensus 15 ~sR~E~laW~N~~l~~n~~kIE----e~~tGaaycqlmd~l~p~~i~lkkVkf~A~~Ehe~i~Nfk-~lQ~~f~klgi~k 89 (295)
T KOG3000|consen 15 ESRLEILAWINDLLQLNLTKIE----ELCTGAAYCQLMDMLFPPDIPLKKVKFAARLEHEYIPNFK-VLQTCFNKLGIDK 89 (295)
T ss_pred cchHHHHHHHHhhhhcchhhhh----hhcccchhhhhhhhccCCccccccccccccccchhhhhhH-HHHHHHHhcCCcc
Confidence 34578999999988754 5564 455688999999999999887776642 23334433 3334445899999
Q ss_pred CCChhhhcccC
Q psy7817 213 LLDPEVRQFLF 223 (228)
Q Consensus 213 ll~p~Di~~~~ 223 (228)
.+++++.+...
T Consensus 90 ~v~vdkLvKg~ 100 (295)
T KOG3000|consen 90 VVDVDKLVKGP 100 (295)
T ss_pred cccHHHHhccc
Confidence 99999987654
No 36
>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms. The different members of the Homo sapiens gene family are HOOK1, HOOK2 and HOOK3. Different domains have been identified in the three Homo sapiens HOOK proteins, and it was demonstrated that the highly conserved NH2-domain mediates attachment to microtubules, whereas the central coiled-coil motif mediates homodimerisation and the more divergent C-terminal domains are involved in binding to specific organelles (organelle-binding domains). It has been demonstrated that endogenous HOOK3 binds to Golgi membranes [], whereas both HOOK1 and HOOK2 are localised to discrete but unidentified cellular structures. In mice the Hook1 gene is predominantly expressed in the testis. Hook1 function is necessary for the correct positioning of microtubular structures within the haploid germ cell. Disruption of Hook1 function in mice causes abnormal sperm head shape and fragile attachment of the flagellum to the sperm head [].; GO: 0008017 microtubule binding, 0000226 microtubule cytoskeleton organization, 0005737 cytoplasm; PDB: 1WIX_A.
Probab=74.39 E-value=1.6 Score=42.29 Aligned_cols=44 Identities=20% Similarity=0.385 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHhhCCCCcceecCCCCCcchhhHHHHHHHhcCCCCC
Q psy7817 139 SAKKTLLRWVSNALPEHIKVSDFGPSWRDGHAFLSVIDNIQKDLVD 184 (228)
Q Consensus 139 ~~~~~Ll~Wv~~~l~~~~~I~nf~~s~~DG~~l~~Li~~~~p~~~~ 184 (228)
..-..|+.|++.. ....++.++ .++.||++|..+++.|.|..++
T Consensus 7 ~l~~~Lv~Wv~tf-~~~~~~~~~-~dL~DGv~L~evL~qIDp~~F~ 50 (713)
T PF05622_consen 7 ELCDSLVTWVQTF-NLSAPCSSY-EDLSDGVALAEVLHQIDPEYFN 50 (713)
T ss_dssp HHHHHHHHHHTT----SS---SH-HHHTTSHHHHHHHHHH-TTTS-
T ss_pred hHHHHHHHHHHHC-CCCCCcCCH-HHccchHHHHHHHHHhCccccC
Confidence 4567899999874 211356655 5899999999999999999776
No 37
>KOG2128|consensus
Probab=71.64 E-value=4.1 Score=41.69 Aligned_cols=77 Identities=17% Similarity=0.282 Sum_probs=59.2
Q ss_pred HHHHHHHhhCCCC-cceecCCCCCcchhhHHHHHHHhcCCCC----CCcccCcCCHHHHHHHHHHHHHhcCCCCCCCChh
Q psy7817 143 TLLRWVSNALPEH-IKVSDFGPSWRDGHAFLSVIDNIQKDLV----DIPALSKQTNRHRLDTAFNVAESNLGIARLLDPE 217 (228)
Q Consensus 143 ~Ll~Wv~~~l~~~-~~I~nf~~s~~DG~~l~~Li~~~~p~~~----~~~~~~~~~~~~n~~~a~~~A~~~lgip~ll~p~ 217 (228)
-.-+|....++.. .+-+.|-.+.|+|+.|+.|.+.+.|+.- .-..+. -...+|+..-+..++ ..|+|...-||
T Consensus 46 E~k~W~e~cl~edL~pttele~~LRNGV~LAkL~~~f~PD~~~~~~~~~~~~-frHtdNi~q~~~~me-~iglP~iF~~E 123 (1401)
T KOG2128|consen 46 EAKRWIEECLGEDLPPTTELEEGLRNGVYLAKLGQFFAPDLEQTIYKANDLH-FRHTDNINQWLRAME-SIGLPEIFYPE 123 (1401)
T ss_pred HHHHHHHHHhcccCCCchHHHHHhhhhhHHHHHHhhcCCcceeeeeecCCce-eecchhHHHHHHHHh-hcCCCcccccc
Confidence 4567999888877 7778888999999999999999999532 111111 134478888899998 89999998887
Q ss_pred --hhcc
Q psy7817 218 --VRQF 221 (228)
Q Consensus 218 --Di~~ 221 (228)
||..
T Consensus 124 ~~Dvy~ 129 (1401)
T KOG2128|consen 124 TTDVYE 129 (1401)
T ss_pred hhhhhc
Confidence 6654
No 38
>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain.
Probab=64.62 E-value=13 Score=26.02 Aligned_cols=61 Identities=11% Similarity=0.112 Sum_probs=36.0
Q ss_pred CCCcchhhHHHHHHHhcCCC-CCCcccCcC--CHHHHHH-HHHHHHHhcCCCCC--CCChhhhcccC
Q psy7817 163 PSWRDGHAFLSVIDNIQKDL-VDIPALSKQ--TNRHRLD-TAFNVAESNLGIAR--LLDPEVRQFLF 223 (228)
Q Consensus 163 ~s~~DG~~l~~Li~~~~p~~-~~~~~~~~~--~~~~n~~-~a~~~A~~~lgip~--ll~p~Di~~~~ 223 (228)
.-|+-|..||.|.+.+.|.. ++.+..... ...+.+- .-+..-..+||+|. +.+-.|+.+-.
T Consensus 8 ~~fr~G~PLc~lfNal~p~~~L~v~~~~~~~~k~~K~ai~~Fi~ack~~L~~~~~e~FtIsdl~~~d 74 (89)
T PF06395_consen 8 KLFRQGYPLCVLFNALQPEEPLPVDPVSSDDLKVCKKAIYKFIQACKQELGFPDEELFTISDLYGDD 74 (89)
T ss_pred HHHhCcCcHHHHHHccCCccCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCccceeeeeccccCC
Confidence 45788999999999999963 333222211 1112222 22333345799985 57777766543
No 39
>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]
Probab=57.82 E-value=6.8 Score=38.32 Aligned_cols=75 Identities=15% Similarity=0.270 Sum_probs=56.3
Q ss_pred HHHHHhhCCCCcceecCCCCCcchhhHHHHHHHhcCCCC----CCcccCcCCHHHHHHHHHHHHHhcCCCCCC--CChhh
Q psy7817 145 LRWVSNALPEHIKVSDFGPSWRDGHAFLSVIDNIQKDLV----DIPALSKQTNRHRLDTAFNVAESNLGIARL--LDPEV 218 (228)
Q Consensus 145 l~Wv~~~l~~~~~I~nf~~s~~DG~~l~~Li~~~~p~~~----~~~~~~~~~~~~n~~~a~~~A~~~lgip~l--l~p~D 218 (228)
-.|+-..+....+-.-|..+.++|+.++.|...+.|+.. +-+.+. -...+|+++-++.-+ ..|+|.. .+-.|
T Consensus 50 K~WIee~~~~~l~~~~fe~slRnGV~La~l~q~f~pd~~~~iF~~~~LQ-frHtdNIN~Fld~i~-~vGlPe~FhFEl~D 127 (1054)
T COG5261 50 KIWIEEVIEEALPELCFEDSLRNGVFLAKLTQRFNPDLTTVIFPADKLQ-FRHTDNINAFLDLIE-HVGLPESFHFELQD 127 (1054)
T ss_pred HHHHHHHhccCCchhhHHHHHhccchHHHHHHHhCCCceeEeeecccce-eeccccHHHHHhHhh-hcCCcceeeeehHh
Confidence 358888877655556678999999999999999999864 223332 244579999999999 8999985 44446
Q ss_pred hcc
Q psy7817 219 RQF 221 (228)
Q Consensus 219 i~~ 221 (228)
+..
T Consensus 128 lYe 130 (1054)
T COG5261 128 LYE 130 (1054)
T ss_pred hhc
Confidence 543
No 40
>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain.
Probab=51.02 E-value=30 Score=24.29 Aligned_cols=24 Identities=25% Similarity=0.389 Sum_probs=22.0
Q ss_pred ccchHHHhhhHHHHHHHHHHHcCC
Q psy7817 27 IDDLTEDLKDGTKLLALLEVLSNE 50 (228)
Q Consensus 27 v~dl~~dl~DGv~L~~Lle~l~~~ 50 (228)
|+.|..-|+-|.=||.|+|.+.+.
T Consensus 3 Vt~LW~~fr~G~PLc~lfNal~p~ 26 (89)
T PF06395_consen 3 VTQLWKLFRQGYPLCVLFNALQPE 26 (89)
T ss_pred HHHHHHHHhCcCcHHHHHHccCCc
Confidence 678899999999999999999886
No 41
>cd08541 SAM_PNT-FLI-1 Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator. SAM Pointed domain of FLI-1 (Friend Leukemia Integration) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The FLI-1 protein participates in regulation of cellular differentiation, proliferation, and survival. The Fli-1 gene was initially described in Friend virus-induced erythroleukemias as a site for virus integration. It is highly expressed in hematopoietic tissues and at lower level in lungs, heart, and ovaries. Fli-1 is a proto-oncogene implicated in Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.
Probab=37.83 E-value=25 Score=24.81 Aligned_cols=35 Identities=14% Similarity=0.379 Sum_probs=22.3
Q ss_pred HHHHHHHHHhhCCCCcceecCC-CCCc--chhhHHHHHH
Q psy7817 141 KKTLLRWVSNALPEHIKVSDFG-PSWR--DGHAFLSVID 176 (228)
Q Consensus 141 ~~~Ll~Wv~~~l~~~~~I~nf~-~s~~--DG~~l~~Li~ 176 (228)
+.....|++-....+ .+.+.. +.|. ||++||.|=.
T Consensus 22 ~~hV~~WL~Wa~~ef-~L~~vd~~~F~~m~Gk~LC~Lsk 59 (91)
T cd08541 22 QEHVRQWLEWAIKEY-GLMEIDTSFFQNMDGKELCKMNK 59 (91)
T ss_pred HHHHHHHHHHHHHHc-CCCCCChhhccCCCHHHHHhCCH
Confidence 456677777666665 334444 4563 9999998633
No 42
>PF04036 DUF372: Domain of unknown function (DUF372); InterPro: IPR007179 This is a group of proteins of unknown function. It is found N-terminal to another domain of unknown function (IPR007181 from INTERPRO).; PDB: 2I52_B 2IEC_D 2OGF_C.
Probab=28.11 E-value=73 Score=18.51 Aligned_cols=33 Identities=12% Similarity=0.156 Sum_probs=22.2
Q ss_pred CcchhhHHHHHHHhcCCCCCCcccCcCCHHHHHHHHHHH
Q psy7817 165 WRDGHAFLSVIDNIQKDLVDIPALSKQTNRHRLDTAFNV 203 (228)
Q Consensus 165 ~~DG~~l~~Li~~~~p~~~~~~~~~~~~~~~n~~~a~~~ 203 (228)
|.-|..|-+|.|++.+.-++. ...+-++.||+-
T Consensus 5 FEaGIklGaLyHQF~GtPvs~------~~~~~le~aie~ 37 (38)
T PF04036_consen 5 FEAGIKLGALYHQFVGTPVSP------ETAESLEKAIEE 37 (38)
T ss_dssp HHHHHHHHHHHHHHTT-EEST------TTHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHhcCCcCCc------chHHHHHHHHhc
Confidence 566899999999998864432 233456666654
No 43
>PF06145 Corona_NS1: Coronavirus nonstructural protein NS1; InterPro: IPR009314 One of the members of this family is a 4.9 kDa proteins, encoded by Bovine coronavirus NS1 [].
Probab=28.02 E-value=25 Score=18.57 Aligned_cols=15 Identities=40% Similarity=0.510 Sum_probs=11.8
Q ss_pred CCChhhhcccCCCCC
Q psy7817 213 LLDPEVRQFLFLHVK 227 (228)
Q Consensus 213 ll~p~Di~~~~~~~~ 227 (228)
++.|+||..-..|+|
T Consensus 9 ll~pddilhp~nhv~ 23 (29)
T PF06145_consen 9 LLAPDDILHPFNHVN 23 (29)
T ss_pred ecCcccccCccccee
Confidence 588999987777765
No 44
>COG1313 PflX Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins [General function prediction only]
Probab=26.27 E-value=56 Score=28.28 Aligned_cols=58 Identities=21% Similarity=0.537 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhCCCCcceecCCCCCcchhhHHHHHHHhcCCCC--CCcccCcCCHHHHHHHHHHHHHhcCCCCCC
Q psy7817 141 KKTLLRWVSNALPEHIKVSDFGPSWRDGHAFLSVIDNIQKDLV--DIPALSKQTNRHRLDTAFNVAESNLGIARL 213 (228)
Q Consensus 141 ~~~Ll~Wv~~~l~~~~~I~nf~~s~~DG~~l~~Li~~~~p~~~--~~~~~~~~~~~~n~~~a~~~A~~~lgip~l 213 (228)
.+-+++|+...++.. +...+..+|.|..- .|..++..-..+-.+.|.+.|+ ++|+.-.
T Consensus 273 TkpI~~wiae~~g~~--------------~~vNiM~QY~P~ykA~eypeI~R~lt~eE~e~a~~~a~-~~gl~~~ 332 (335)
T COG1313 273 TKPILRWIAENLGND--------------VRVNIMFQYRPEYKAEEYPEINRRLTREEYEKALEYAE-KLGLTNI 332 (335)
T ss_pred cHHHHHHHHHhCCCC--------------eeEEehhhccchhhhhhchhhcccCCHHHHHHHHHHHH-HcCCcee
Confidence 456777887777642 23335778999643 6666766666778999999999 8888654
No 45
>cd08537 SAM_PNT-ESE-1-like Sterile alpha motif (SAM)/Pointed domain of ESE-1 like ETS transcriptional regulators. SAM Pointed domain of ESE-1-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. SAM Pointed domain of ESE-1 provides a potential docking site for signaling kinase Pak1 in humans. ESE-1 factors are involved in regulation of gene expression in different types of epithelial cells. ESE-1 is expressed in many different organs including intestine, stomach, pancreas, lungs, kidneys, and prostate. The DNA binding consensus motif for ESE-1 consists of a purine-rich GGA[AT] core sequence. The expression profile of these factors is altered in epithelial cancers if compared to normal tissues. Members of this subfamily are potential targets for cancer therapy.
Probab=25.87 E-value=44 Score=22.79 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhCCC--C-cceecCCCCCcchhhHHHH
Q psy7817 140 AKKTLLRWVSNALPE--H-IKVSDFGPSWRDGHAFLSV 174 (228)
Q Consensus 140 ~~~~Ll~Wv~~~l~~--~-~~I~nf~~s~~DG~~l~~L 174 (228)
.+...+.|++..+.. + ..--+|...--||.+||.+
T Consensus 14 tk~qVleWL~~~~e~n~~dl~~v~f~~F~MnG~~LC~l 51 (78)
T cd08537 14 TKTQVLEWISYHVEKNKYDASSIDFSRCDMDGATLCNC 51 (78)
T ss_pred cHHHHHHHHHHHHHhccCCcccCCHHHhCCchHHHHcc
Confidence 367889999998843 4 3333444556799999975
No 46
>smart00857 Resolvase Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.
Probab=24.91 E-value=2.8e+02 Score=20.30 Aligned_cols=78 Identities=22% Similarity=0.215 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCccchHHHh-h-----hHHHHHHHHHHHcCCCCCCcCCCCCCccch-hhhHHHHHHHH
Q psy7817 4 RVQKKTFVNWINSYLSKRHPPLRIDDLTEDL-K-----DGTKLLALLEVLSNEKLPVEKGRNLRRPHF-LSNANTALQFL 76 (228)
Q Consensus 4 ~~q~~~~~~WiN~~L~~~~~~~~v~dl~~dl-~-----DGv~L~~Lle~l~~~~~~~~~~~~~~~~~~-i~N~~~~l~~~ 76 (228)
+.|.+.+.+|+..+- ..+...+.|. . +---|.+|++.+..+.+..-.....+++-. ..-+...++.+
T Consensus 18 ~~Q~~~~~~~a~~~g------~~i~~~~~d~~~Sg~~~~Rp~l~~ll~~~~~g~~~~ivv~~~~Rl~R~~~~~~~~~~~l 91 (148)
T smart00857 18 ERQLEALRAYAKANG------WEVVRIYEDEGVSGKKADRPGLQRLLADLRAGDIDVLVVYKLDRLGRSLRDLLALLELL 91 (148)
T ss_pred HHHHHHHHHHHHHCC------CEEEEEEEeCCCcCCCCCCHHHHHHHHHHHcCCCCEEEEeccchhhCcHHHHHHHHHHH
Confidence 468888888887762 2222333333 1 234688999988877643222222223222 22344556677
Q ss_pred HhCCceeeecC
Q psy7817 77 QSKRIKLVNIN 87 (228)
Q Consensus 77 ~~~g~~~~~i~ 87 (228)
...|+.+..+.
T Consensus 92 ~~~gi~l~~~~ 102 (148)
T smart00857 92 EKKGVRLVSVT 102 (148)
T ss_pred HHCCCEEEECc
Confidence 88999876443
No 47
>PF06198 DUF999: Protein of unknown function (DUF999); InterPro: IPR009340 This is a family of conserved Schizosaccharomyces pombe proteins with unknown function.
Probab=23.30 E-value=91 Score=22.73 Aligned_cols=35 Identities=29% Similarity=0.570 Sum_probs=26.1
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHHHHhhccCCCCCCCCCCcccccHHHHHHHHHHhh
Q psy7817 95 RPAVVLGLIWTIILYFQIEENTRALAALSAEGYTSPEPGKKDVESAKKTLLRWVSNA 151 (228)
Q Consensus 95 ~~~~iL~llw~li~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Ll~Wv~~~ 151 (228)
+.+-.|-++|+|+.-|.+.. +...++.++-|++..
T Consensus 84 ~~rw~lliiw~ii~v~~idk----------------------~f~vk~~~~~wi~en 118 (143)
T PF06198_consen 84 KSRWPLLIIWSIIIVFAIDK----------------------KFEVKEFLSIWINEN 118 (143)
T ss_pred ccccHHHHHHHHHHheeecc----------------------chhHHHHHHHHHccc
Confidence 34667889999999888752 235678999998643
No 48
>PF14956 DUF4505: Domain of unknown function (DUF4505)
Probab=22.10 E-value=57 Score=26.01 Aligned_cols=27 Identities=11% Similarity=0.265 Sum_probs=24.9
Q ss_pred cceecCCCCCcchhhHHHHHHHhcCCC
Q psy7817 156 IKVSDFGPSWRDGHAFLSVIDNIQKDL 182 (228)
Q Consensus 156 ~~I~nf~~s~~DG~~l~~Li~~~~p~~ 182 (228)
.++.||+++++|-..|.-...+++|+.
T Consensus 32 sk~KNftscfKd~~FL~FFF~rlr~N~ 58 (183)
T PF14956_consen 32 SKMKNFTSCFKDKKFLDFFFSRLRPNQ 58 (183)
T ss_pred ccccchhhhccchHHHHHHHHHhccCC
Confidence 679999999999999999999999964
No 49
>PF14804 Jag_N: Jag N-terminus; PDB: 3GKU_B.
Probab=21.66 E-value=76 Score=19.75 Aligned_cols=17 Identities=29% Similarity=0.513 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhcCCCCC
Q psy7817 196 RLDTAFNVAESNLGIAR 212 (228)
Q Consensus 196 n~~~a~~~A~~~lgip~ 212 (228)
.++.|++.|.+.||+|+
T Consensus 6 t~eeAi~~A~~~l~~~~ 22 (52)
T PF14804_consen 6 TVEEAIEKALKELGVPR 22 (52)
T ss_dssp SHHHHHHHHHHHTT--G
T ss_pred CHHHHHHHHHHHhCCCh
Confidence 46789999999999985
No 50
>KOG0165|consensus
Probab=21.31 E-value=6.6 Score=37.97 Aligned_cols=77 Identities=10% Similarity=0.003 Sum_probs=0.0
Q ss_pred hHHHhhhHHHHHHHHH-HHcCCCCCCc-CCCCCCccchhhhHHHHHHHHHhCCceeeecCCCCccCCchhHHHHHHHHHH
Q psy7817 30 LTEDLKDGTKLLALLE-VLSNEKLPVE-KGRNLRRPHFLSNANTALQFLQSKRIKLVNINSSDLVDGRPAVVLGLIWTII 107 (228)
Q Consensus 30 l~~dl~DGv~L~~Lle-~l~~~~~~~~-~~~~~~~~~~i~N~~~~l~~~~~~g~~~~~i~~~di~~g~~~~iL~llw~li 107 (228)
+.-++.+|+.|..+.+ .+.++.+... +.....+.-++.|+...|..+.. |+...++...-+|.|+...+++..|.++
T Consensus 352 ~q~~~~aGl~Lk~~~e~~~~~~~~~~~~R~~a~~r~~kI~~V~l~L~~~~s-gl~T~~~~~~~~Vg~~~~i~~S~~~~~~ 430 (1023)
T KOG0165|consen 352 IQRKWRAGLPLKIAHEHFLMIKRHRAACRIQAHYRGYKIRQVSLRLKSAAS-GLITQKYIRAREVGKHERIKYSEFKKST 430 (1023)
T ss_pred HhHhhhcCcchHHHHHHHHHHHHHHHHhhhHhHHHHhccceeEEEehhhhc-cccHHHHHHHHhhcccccchhHHHHHHH
No 51
>cd08757 SAM_PNT_ESE Sterile alpha motif (SAM)/Pointed domain of ESE-like ETS transcriptional regulators. SAM Pointed domain of ESE-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. ETS factors are important for cell differentiation. They can be involved in regulation of gene expression in different types of epithelial cells. They are expressed in salivary gland, intestine, stomach, pancreas, lungs, kidneys, colon, mammary gland, and prostate. Members of this group are proto-oncogenes. Expression profiles of these factors are altered in epithelial cancers, which makes them potential targets for cancer therapy.
Probab=20.69 E-value=72 Score=20.96 Aligned_cols=34 Identities=18% Similarity=0.383 Sum_probs=19.9
Q ss_pred HHHHHHHHhhCCCC-ccee--cCCCCCcchhhHHHHH
Q psy7817 142 KTLLRWVSNALPEH-IKVS--DFGPSWRDGHAFLSVI 175 (228)
Q Consensus 142 ~~Ll~Wv~~~l~~~-~~I~--nf~~s~~DG~~l~~Li 175 (228)
.-.+.|+...+..+ ++.. +++.---||++||.+=
T Consensus 8 ~~V~~Wl~w~~~e~~l~~~~i~~~~F~m~Gk~LC~ms 44 (68)
T cd08757 8 NDVLEWLQFVAEQNKLDAECISFQKFNIDGQTLCSMT 44 (68)
T ss_pred HHHHHHHHHHHHHcCCCCCcCCccccCCCHHHHHcCC
Confidence 45677777665543 2221 3333357999999853
No 52
>cd08203 SAM_PNT Sterile alpha motif (SAM)/Pointed domain. Sterile alpha motif (SAM)/Pointed domain is found in about 40% of transcriptional regulators of ETS family (initially named for Erythroblastosis virus, E26-E Twenty Six). SAM Pointed domain containing proteins of this family additionally have C-terminal ETS DNA-binding domain. In a few cases, SAM Pointed domain appears as a single domain protein. Members of this group are mostly involved in regulation of embryonic development and growth control in eukaryotes. SAM Pointed domains mediate protein-protein interactions. Depending on the subgroup, they can interact with other SAM Pointed domains forming homo or hetero dimers/oligomers and/or they can recruit a protein kinase to its target which can be the SAM Pointed domain containing protein itself or another protein that has no kinase docking site. Thus, SAM Pointed domains participate in transcriptional regulation and signal transduction. Some genes coding ETS family transcripti
Probab=20.61 E-value=74 Score=20.70 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=20.5
Q ss_pred HHHHHHHHhhCCCC-cceecCCCCCcchhhHHHH
Q psy7817 142 KTLLRWVSNALPEH-IKVSDFGPSWRDGHAFLSV 174 (228)
Q Consensus 142 ~~Ll~Wv~~~l~~~-~~I~nf~~s~~DG~~l~~L 174 (228)
.....|++.....+ ++..+++.-=-||+.||.+
T Consensus 8 ~~V~~Wl~w~~~~f~L~~~~~~~F~m~G~~Lc~l 41 (66)
T cd08203 8 EHVLQWLEWAVKEFSLPPIDFSKFNMNGKELCLL 41 (66)
T ss_pred HHHHHHHHHHHHhcCCCCCChhhcCCCHHHHHhC
Confidence 45677777776665 2222333335789999975
No 53
>cd08539 SAM_PNT-ESE-3-like Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators. SAM Pointed domain of ESE-3-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. The ESE-3 transcriptional activator is involved in regulation of glandular epithelium differentiation through the MAP kinase signaling cascade. It is found to be expressed in glandular epithelium of prostate, pancreas, salivary gland, and trachea. Additionally, ESE-3 is differentially expressed during monocyte-derived dendritic cells development. DNA binding consensus motif for ESE-3 consists of purine-rich GGAA/T core sequence. The expression profiles of these factors are altered in epithelial cancers. Members of this subfamily are potential targets for cancer therapy.
Probab=20.22 E-value=45 Score=22.53 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhCCCC-ccee--cCCCCCcchhhHHHH
Q psy7817 141 KKTLLRWVSNALPEH-IKVS--DFGPSWRDGHAFLSV 174 (228)
Q Consensus 141 ~~~Ll~Wv~~~l~~~-~~I~--nf~~s~~DG~~l~~L 174 (228)
+...+.|++..+..+ +... +|...--||.+||.+
T Consensus 10 k~~V~~WL~~~~~~~~~~~~~i~~~~F~MnG~~LC~m 46 (74)
T cd08539 10 KYQVWEWLQHLLDTNQLDASCIPFQEFDINGEHLCSM 46 (74)
T ss_pred HHHHHHHHHHHHHHcCCCcccccHHHcCCChHHHHcc
Confidence 567888988885554 3333 555556799999975
Done!