RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy782
(100 letters)
>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I
{Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}
Length = 418
Score = 84.1 bits (206), Expect = 3e-21
Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 7 KFALPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLL 66
KF LP R++ S SVWVE+IQL+ +KPLNLGQGFPDY AP + LA AA + L
Sbjct: 1 KFDLPKRYQGSTKSVWVEYIQLAAQYKPLNLGQGFPDYH-APKYALNALAAAANSPDPLA 59
Query: 67 NQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
NQYTRGFGHPR+VQA++KLYS L++R + P V
Sbjct: 60 NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEV 93
>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I
{Human (Homo sapiens) [TaxId: 9606]}
Length = 418
Score = 66.7 bits (161), Expect = 4e-15
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 13 RFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRG 72
R + Y+ WVEF++L+ +H +NLGQGFPD+ P + A +G + +LNQYT+
Sbjct: 6 RLDGIDYNPWVEFVKLASEHDVVNLGQGFPDFP-PPDFAVEAFQHAVSG-DFMLNQYTKT 63
Query: 73 FGHPRIVQAIAKLYSSLIERPLLPHQLV 100
FG+P + + +A + L+ + + P + V
Sbjct: 64 FGYPPLTKILASFFGELLGQEIDPLRNV 91
>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL
{Escherichia coli [TaxId: 562]}
Length = 382
Score = 59.0 bits (141), Expect = 2e-12
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 20 SVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIV 79
+++ + L+ H+ +NL QGFPD++ P ++ + LA + NQY G +
Sbjct: 14 TIFTQMSALAQQHQAINLSQGFPDFD-GPRYLQERLAHHV---AQGANQYAPMTGVQALR 69
Query: 80 QAIAKLYSSLIERPLLPHQLV 100
+AIA+ L +
Sbjct: 70 EAIAQKTERLYGYQPDADSDI 90
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus
thermophilus [TaxId: 274]}
Length = 368
Score = 55.1 bits (131), Expect = 6e-11
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQY 69
L PR EA+ S++ L+ +NLGQGFP P + + + A +QY
Sbjct: 3 LHPRTEAAKESIFPRMSGLAQRLGAVNLGQGFPSNP-PPPFLLEAVRRALGR----QDQY 57
Query: 70 TRGFGHPRIVQAIAK 84
G P + +A+A+
Sbjct: 58 APPAGLPALREALAE 72
>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga
maritima [TaxId: 2336]}
Length = 420
Score = 52.5 bits (124), Expect = 5e-10
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
Query: 1 MSSQASKFA--LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAP-SHVSKGLAD 57
+ + SK + S+ E ++ + D ++ G G PD E+ P +++ +
Sbjct: 12 LEGKISKIGQNMKS-------SIIREILKFAADKDAISFGGGVPDPETFPRKELAEIAKE 64
Query: 58 AATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
E QY+ G P + Q I KL + L +
Sbjct: 65 IIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNL 107
>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase,
MSAT {Thermococcus profundus [TaxId: 49899]}
Length = 403
Score = 45.4 bits (106), Expect = 2e-07
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 20 SVWVEFIQLSLDHKPLNLGQGFPDYESAP-SHVSKGLADAATGENKLLNQYTRGFGHPRI 78
S E ++L ++L G P E+ P + K + QY G +
Sbjct: 17 SEVRELLKLVETSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPL 76
Query: 79 VQAIAKLYS 87
A+A+
Sbjct: 77 RLALARWME 85
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 43.7 bits (102), Expect = 6e-07
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 9 ALPPRFEASVYSVWVEFIQLSLDHKP-LNLGQGFPDYESAPSHVSKGLADAATGENKLLN 67
AL R E S + ++ K ++LG G PD++ P H+ + +A +K L
Sbjct: 1 ALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFD-TPQHIKEYAKEAL---DKGLT 56
Query: 68 QYTRGFGHPRIVQAIAKLYSSLIERPLLPHQLV 100
Y G + +AIA+ P +
Sbjct: 57 HYGPNIGLLELREAIAEKLKKQNGIEADPKTEI 89
>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga
maritima [TaxId: 2336]}
Length = 389
Score = 42.9 bits (99), Expect = 1e-06
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Query: 32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS 87
+ +L G PD + P + + + + Y+ G + +A A Y
Sbjct: 28 VRIHHLNIGQPDLK-TPEVFFERIYENKPE----VVYYSHSAGIWELREAFASYYK 78
>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT)
{Trypanosoma cruzi [TaxId: 5693]}
Length = 412
Score = 42.2 bits (97), Expect = 2e-06
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 23 VEFIQLSLDHKP-LNLGQGFPDYES---APSHVSKGLADAATGENKLLNQYTRGFGHPRI 78
+ + S KP + L G P + + K L +A +++ N Y G P
Sbjct: 20 SDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAI--DSQECNGYFPTVGSPEA 77
Query: 79 VQAIAKLYS 87
+A+A +
Sbjct: 78 REAVATWWR 86
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium
lapideum [TaxId: 32060]}
Length = 388
Score = 38.6 bits (89), Expect = 3e-05
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE 91
+ G PD+ P H+ + A + +Y G PR+ +AIA+
Sbjct: 30 IDVCSFSAGEPDFN-TPKHIVEAAKAAL---EQGKTRYGPAAGEPRLREAIAQKLQRDNG 85
Query: 92 RPLLPHQLV 100
++
Sbjct: 86 LCYGADNIL 94
>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga
maritima [TaxId: 2336]}
Length = 375
Score = 35.4 bits (80), Expect = 4e-04
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Query: 32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAI 82
+NL G PD+ P V + K +YT G + + I
Sbjct: 28 EDVINLTAGEPDFP-TPEPVVEEAVRFL---QKGEVKYTDPRGIYELREGI 74
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus
thermophilus [TaxId: 274]}
Length = 382
Score = 34.7 bits (79), Expect = 7e-04
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 32 HKPLNLGQGFPDYESAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYSSLIE 91
+ L G PD++ P HV + A + +Y G P + +A+A+ +
Sbjct: 31 VDLVALTAGEPDFD-TPEHVKEAARRAL---AQGKTKYAPPAGIPELREALAEKFRRENG 86
Query: 92 RPLLPHQ 98
+ P +
Sbjct: 87 LSVTPEE 93
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 395
Score = 34.5 bits (78), Expect = 0.001
Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Query: 32 HKPLNLGQGFPDYE--SAPSHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS 87
K + L G P P H+ + A + N Y G P + +AI +
Sbjct: 30 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAI---KEGHNYYGDSEGLPELRKAIVEREK 84
>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Paracoccus denitrificans [TaxId: 266]}
Length = 394
Score = 31.1 bits (69), Expect = 0.013
Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 7/82 (8%)
Query: 10 LPPRFEASVYSVWVEFIQLSLDHKPLNLGQG-FPDYESAP---SHVSKGLADAATGENKL 65
L P+ + ++ EF K ++LG G + D V E +
Sbjct: 5 LKPQAPDKILALMGEFRADPRQGK-IDLGVGVYKDATGHTPIMRAVHAAEQRML--ETET 61
Query: 66 LNQYTRGFGHPRIVQAIAKLYS 87
Y G P +A+ +L
Sbjct: 62 TKTYAGLSGEPEFQKAMGELIL 83
>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken
(Gallus gallus), mitochondria [TaxId: 9031]}
Length = 401
Score = 31.1 bits (69), Expect = 0.013
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Query: 36 NLGQG-FPDYESAP---SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLY 86
NLG G + D P + V K A A K+ +Y G +A A+L
Sbjct: 32 NLGVGAYRDDNGKPYVLNCVRKAEAMIA--AKKMDKEYLPIAGLADFTRASAELA 84
>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT
{Escherichia coli [TaxId: 562]}
Length = 396
Score = 31.1 bits (69), Expect = 0.017
Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 6/56 (10%)
Query: 36 NLGQG-FPDYESAP---SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS 87
NLG G + D + V K EN+ Y G P + +L
Sbjct: 30 NLGIGVYKDETGKTPVLTSVKKAEQYLL--ENETTKNYLGIDGIPEFGRCTQELLF 83
>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus
scrofa), cytosolic form [TaxId: 9823]}
Length = 412
Score = 30.3 bits (67), Expect = 0.029
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 3 SQASKFA-LPPRFEASVYSVWVEFIQLSLDHKPLNLGQGFPDYESAPSHVSKGLADAAT- 60
+ S FA +P V+ + +F + K +NLG G + V +
Sbjct: 1 APPSVFAEVPQAQPVLVFKLIADFREDPDPRK-VNLGVGAYRTDDCQPWVLPVVRKVEQR 59
Query: 61 --GENKLLNQYTRGFGHPRIVQAIAKLY 86
+ L ++Y G ++L
Sbjct: 60 IANNSSLNHEYLPILGLAEFRTCASRLA 87
>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's
yeast (Saccharomyces cerevisiae), cytosolic form
[TaxId: 4932]}
Length = 412
Score = 30.0 bits (66), Expect = 0.040
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Query: 35 LNLGQGFPDYESAPSHVSKGLADAAT---GENKLLNQYTRGFGHPRIVQAIAKLY 86
++LG G ++ V + A ++ ++Y G P + AK+
Sbjct: 32 VDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKII 86
>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Escherichia coli [TaxId: 562]}
Length = 397
Score = 28.0 bits (61), Expect = 0.20
Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Query: 35 LNLGQGFPDYESAPSHVSKGLADA---ATGENKLLNQYTRGFGHPRIVQAIAKLYS 87
+NL G E + +A+A + + Y G AIA L
Sbjct: 29 VNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLF 84
>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Tomato (Lycopersicon esculentum)
[TaxId: 4081]}
Length = 428
Score = 26.9 bits (58), Expect = 0.40
Identities = 7/39 (17%), Positives = 12/39 (30%)
Query: 49 SHVSKGLADAATGENKLLNQYTRGFGHPRIVQAIAKLYS 87
+ + K + + G P +AIAK
Sbjct: 59 RNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFME 97
>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}
Length = 461
Score = 26.1 bits (56), Expect = 0.91
Identities = 4/13 (30%), Positives = 9/13 (69%)
Query: 72 GFGHPRIVQAIAK 84
G+ HP +V+ + +
Sbjct: 68 GYSHPALVKLVQQ 80
>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, BioA {Escherichia coli [TaxId: 562]}
Length = 429
Score = 25.7 bits (55), Expect = 1.2
Identities = 4/13 (30%), Positives = 8/13 (61%)
Query: 72 GFGHPRIVQAIAK 84
G+ HP++ A+
Sbjct: 58 GYNHPQLNAAMKS 70
>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine
aminotransferase ArgD {Thermus thermophilus [TaxId:
274]}
Length = 387
Score = 25.5 bits (55), Expect = 1.2
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 72 GFGHPRIVQAIAKLYSSLI 90
G G+P +V+A+ + +L+
Sbjct: 52 GHGNPEVVEAVKRQAETLM 70
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase
{Pseudomonas cepacia [TaxId: 292]}
Length = 431
Score = 25.4 bits (54), Expect = 1.3
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 72 GFGHPRIVQAIAK 84
G HP IV I +
Sbjct: 56 GHCHPEIVSVIGE 68
>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium
yoelii yoelii [TaxId: 73239]}
Length = 404
Score = 25.5 bits (55), Expect = 1.4
Identities = 5/13 (38%), Positives = 7/13 (53%)
Query: 72 GFGHPRIVQAIAK 84
G HP I+ A+
Sbjct: 54 GHCHPNILNAMIN 66
>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Escherichia coli [TaxId: 562]}
Length = 425
Score = 25.2 bits (54), Expect = 1.6
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 72 GFGHPRIVQAIAK 84
G HP++V A+
Sbjct: 55 GHLHPKVVAAVEA 67
>d2fiqa1 c.1.10.7 (A:1-420) Putative tagatose 6-phosphate kinase 1
GatZ {Escherichia coli [TaxId: 562]}
Length = 420
Score = 24.8 bits (54), Expect = 2.4
Identities = 4/22 (18%), Positives = 10/22 (45%)
Query: 73 FGHPRIVQAIAKLYSSLIERPL 94
+ H RI ++ + +L +
Sbjct: 353 WPHSRIKNSVETMMVNLQGVDI 374
>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 404
Score = 24.7 bits (53), Expect = 2.4
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 72 GFGHPRIVQAIAK 84
G HP+IV A+
Sbjct: 56 GHCHPKIVNALKS 68
>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase
(aminotransferase) {Synechococcus sp., strain GR6
[TaxId: 1131]}
Length = 427
Score = 24.8 bits (53), Expect = 2.7
Identities = 4/13 (30%), Positives = 8/13 (61%)
Query: 72 GFGHPRIVQAIAK 84
G HP +++A+
Sbjct: 67 GHAHPEVIEALKV 79
>d1v3ea_ b.68.1.1 (A:) Hemagglutinin-neuraminidase glycoprotein
{Human parainfluenza virus type 3 [TaxId: 11216]}
Length = 431
Score = 24.4 bits (53), Expect = 3.3
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 68 QYTRGFGHPRIVQAIAKLYSSLIERPLLP 96
++ F R+V +I + L P L
Sbjct: 226 SHSPWFSDRRMVNSIIVVDKGLNSIPKLK 254
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus
abyssi [TaxId: 29292]}
Length = 437
Score = 24.4 bits (51), Expect = 3.8
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 68 QYTRGFGHPRIVQAIAKLYSSLIER 92
+ F + + K Y+ I+R
Sbjct: 407 KRAMSFSWEKSAERYVKAYTGSIDR 431
>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase
(ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}
Length = 431
Score = 23.8 bits (50), Expect = 5.2
Identities = 4/22 (18%), Positives = 8/22 (36%)
Query: 66 LNQYTRGFGHPRIVQAIAKLYS 87
L + G P +A+ +
Sbjct: 77 LALFQDYHGLPAFKKAMVDFMA 98
>d2o8ia1 a.288.1.1 (A:1-165) Hypothetical protein Atu2327
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 165
Score = 23.0 bits (49), Expect = 8.3
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Query: 45 ESAPSHVSKGLADAATGE----NKLLNQYTRGFGHPRIV 79
+S GL + E +L + YT FG P I+
Sbjct: 79 DSRNEQAGAGLDRLSPQEHARFTQLNSAYTEKFGFPFII 117
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.395
Gapped
Lambda K H
0.267 0.0433 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 343,408
Number of extensions: 12797
Number of successful extensions: 65
Number of sequences better than 10.0: 1
Number of HSP's gapped: 55
Number of HSP's successfully gapped: 36
Length of query: 100
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 38
Effective length of database: 1,556,336
Effective search space: 59140768
Effective search space used: 59140768
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.6 bits)