BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7825
(357 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 200 bits (509), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 161/262 (61%), Gaps = 13/262 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VA+K++ K + P L+K RE+ ++K L HPN
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPN 72
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y+IMEYA G + D++ G + E + FRQ+V A+ YCH++ +
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G + DTFCGS YA+PE+ +G
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSN---EFTVGGK---LDTFCGSPPYAAPELFQGKK 186
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P +S +C+ LL +
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMSTDCENLLKR 244
Query: 305 --IFSPIKFRIRLKDIKQDPWV 324
+ +PIK R L+ I +D W+
Sbjct: 245 FLVLNPIK-RGTLEQIMKDRWI 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 157/260 (60%), Gaps = 9/260 (3%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VAVK++ K + P L+K RE+ ++K L HPN
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF-REVRIMKILNHPN 75
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y++MEYA G + D++ G + E + FRQ+V A+ YCH++ +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+DG+ NIK++DFGF+ + G++ DTFCGS YA+PE+ +G
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSN---EFTVGNK---LDTFCGSPPYAAPELFQGKK 189
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P + E
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLL 249
Query: 305 IFSPIKFRIRLKDIKQDPWV 324
+ +PIK R L+ I +D W+
Sbjct: 250 VLNPIK-RGSLEQIMKDRWM 268
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 160/262 (61%), Gaps = 13/262 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VA+K++ K + P L+K RE+ ++K L HPN
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHPN 75
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y+IMEYA G + D++ G + E + FRQ+V A+ YCH++ +
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI 135
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G + D FCG+ YA+PE+ +G
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSN---EFTVGGK---LDAFCGAPPYAAPELFQGKK 189
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P +S +C+ LL +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMSTDCENLLKR 247
Query: 305 --IFSPIKFRIRLKDIKQDPWV 324
+ +PIK R L+ I +D W+
Sbjct: 248 FLVLNPIK-RGTLEQIMKDRWI 268
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 163/264 (61%), Gaps = 17/264 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VAVK++ K + L+K L RE+ ++K L HPN
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPN 67
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y++MEYA G + D++ G++ E + FRQ+V A+ YCH++ +
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G++ DTFCGS YA+PE+ +G
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNK---LDTFCGSPPYAAPELFQGKK 181
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV---FPTEPNVSAECKTLL 302
Y DVWS+GV+LY + G LPFD N LK+++ +V+ + +S +C+ LL
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQN----LKELRERVLRGKYRIPFYMSTDCENLL 237
Query: 303 SK--IFSPIKFRIRLKDIKQDPWV 324
K I +P K R L+ I +D W+
Sbjct: 238 KKFLILNPSK-RGTLEQIMKDRWM 260
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 160/262 (61%), Gaps = 13/262 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VAVK++ K + L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y++MEYA G + D++ G + E + FRQ+V A+ YCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G++ DTFCGS YA+PE+ +G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNK---LDTFCGSPPYAAPELFQGKK 188
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P +S +C+ LL K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMSTDCENLLKK 246
Query: 305 --IFSPIKFRIRLKDIKQDPWV 324
I +P K R L+ I +D W+
Sbjct: 247 FLILNPSK-RGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 160/262 (61%), Gaps = 13/262 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VAVK++ K + L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y++MEYA G + D++ G + E + FRQ+V A+ YCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G++ DTFCGS YA+PE+ +G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNK---LDTFCGSPPYAAPELFQGKK 188
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P +S +C+ LL K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMSTDCENLLKK 246
Query: 305 --IFSPIKFRIRLKDIKQDPWV 324
I +P K R L+ I +D W+
Sbjct: 247 FLILNPSK-RGTLEQIMKDRWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 160/262 (61%), Gaps = 13/262 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VAV+++ K + L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y++MEYA G + D++ G + E + FRQ+V A+ YCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G++ DTFCGS YA+PE+ +G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNK---LDTFCGSPPYAAPELFQGKK 188
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P +S +C+ LL K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMSTDCENLLKK 246
Query: 305 --IFSPIKFRIRLKDIKQDPWV 324
I +P K R L+ I +D W+
Sbjct: 247 FLILNPSK-RGTLEQIMKDRWM 267
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 159/262 (60%), Gaps = 13/262 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VAVK++ K + L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y++MEYA G + D++ G + E + FRQ+V A+ YCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G++ D FCG+ YA+PE+ +G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNK---LDAFCGAPPYAAPELFQGKK 188
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P +S +C+ LL K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMSTDCENLLKK 246
Query: 305 --IFSPIKFRIRLKDIKQDPWV 324
I +P K R L+ I +D W+
Sbjct: 247 FLILNPSK-RGTLEQIMKDRWM 267
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 159/262 (60%), Gaps = 13/262 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VAV+++ K + L+K RE+ ++K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPN 74
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y++MEYA G + D++ G + E + FRQ+V A+ YCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G++ D FCGS YA+PE+ +G
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNK---LDEFCGSPPYAAPELFQGKK 188
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P +S +C+ LL K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMSTDCENLLKK 246
Query: 305 --IFSPIKFRIRLKDIKQDPWV 324
I +P K R L+ I +D W+
Sbjct: 247 FLILNPSK-RGTLEQIMKDRWM 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 154/261 (59%), Gaps = 13/261 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++A VKLA G +VAVK++ K + L+K RE+ + K L HPN
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPN 74
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++ + IET +Y++ EYA G + D++ G E + FRQ+V A+ YCH++ +
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFI 134
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D + NIK++DFGF+ + G++ D FCG+ YA+PE+ +G
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSN---EFTFGNK---LDAFCGAPPYAAPELFQGKK 188
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSK 304
Y DVWS+GV+LY + G LPFD N +L ++V + K P S +C+ LL K
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YXSTDCENLLKK 246
Query: 305 --IFSPIKFRIRLKDIKQDPW 323
I +P K R L+ I +D W
Sbjct: 247 FLILNPSK-RGTLEQIXKDRW 266
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 152/269 (56%), Gaps = 20/269 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
YVLG +G+G++ VK+ G VAVK++++ + + + REI +K RHP+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+I+ Q I T +++MEY G L D+I + G ++E ++ F+Q++ A+DYCH V
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSD-----TFCGSYAYASPEI 240
VHRD+K EN+L+D N K++DFG + + +SD T CGS YA+PE+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS-----------NMMSDGEFLRTSCGSPNYAAPEV 181
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT 300
+ G Y D+WS GV+LYA+ G LPFDD + L K+++ V + E ++ T
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE-YLNRSVAT 240
Query: 301 LLSKIFS--PIKFRIRLKDIKQDPWVKTE 327
LL + P+K R +KDI++ W K +
Sbjct: 241 LLMHMLQVDPLK-RATIKDIREHEWFKQD 268
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 150/264 (56%), Gaps = 10/264 (3%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
YVLG +G+G++ VK+ G VAVK++++ + + + REI +K RHP+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+I+ Q I T +++MEY G L D+I + G ++E ++ F+Q++ A+DYCH V
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K EN+L+D N K++DFG + L D+ CGS YA+PE++ G
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSN-----MMSDGEFLRDS-CGSPNYAAPEVISGRL 186
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
Y D+WS GV+LYA+ G LPFDD + L K+++ V + E ++ TLL +
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE-YLNRSVATLLMHM 245
Query: 306 FS--PIKFRIRLKDIKQDPWVKTE 327
P+K R +KDI++ W K +
Sbjct: 246 LQVDPLK-RATIKDIREHEWFKQD 268
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 150/265 (56%), Gaps = 12/265 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y+LG +G+G++ VK+ G VAVK++++ + + + REI +K RHP+
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+I+ Q I T ++++MEY G L D+I + G +DE +++ F+Q++ +DYCH V
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K EN+L+D N K++DFG + + S CGS YA+PE++ G
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS------CGSPNYAAPEVISGRL 191
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTE---PNVSAECKTLL 302
Y D+WS GV+LYA+ G LPFDD + L K++ + + + P+V + K +L
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHML 251
Query: 303 SKIFSPIKFRIRLKDIKQDPWVKTE 327
P+K R +KDI++ W K +
Sbjct: 252 Q--VDPMK-RATIKDIREHEWFKQD 273
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 146/268 (54%), Gaps = 14/268 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPR---EIDVVKGLR 122
Y L + IG G +A VKLA G VA+K++ K D LPR EI+ +K LR
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD-----LPRIKTEIEALKNLR 66
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
H ++ + +ET +++++++EY G L D+I + + E T+ FRQ+V A+ Y H
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS 126
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
+G HRD+K ENLL D + +KL DFG K H T CGS AYA+PE+++
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ----TCCGSLAYAAPELIQ 182
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLL 302
G Y +DVWSMG++LY + G LPFDD N + L K++ + + +S LL
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI-MRGKYDVPKWLSPSSILLL 241
Query: 303 SKIFS-PIKFRIRLKDIKQDPWVKTEAN 329
++ K RI +K++ PW+ + N
Sbjct: 242 QQMLQVDPKKRISMKNLLNHPWIMQDYN 269
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 151/260 (58%), Gaps = 11/260 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y++ + +G GS+ VKLAT + VA+K +S+ + + REI +K LRHP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+I+ I T + +++EYA G L D+I + + E +++F+Q++ AI+YCH +
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D N+K++DFG + G+ T CGS YA+PE++ G
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSN---IMTDGN---FLKTSCGSPNYAAPEVINGKL 183
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
Y DVWS G+VLY M GRLPFDD L K+V + V+ +S ++L+ ++
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS-CVYVMPDFLSPGAQSLIRRM 242
Query: 306 F--SPIKFRIRLKDIKQDPW 323
P++ RI +++I++DPW
Sbjct: 243 IVADPMQ-RITIQEIRRDPW 261
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 145/265 (54%), Gaps = 13/265 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K +G GS+ VKLA T G VA+K+++K ++ + REI ++ LRHP+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+I+ I++ + +++EYA L D+I + + E +++F+Q++ A++YCH +
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D N+K++DFG + T CGS YA+PE++ G
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMT------DGNFLKTSCGSPNYAAPEVISGKL 188
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKV-VFP--TEPNVSAECKTLL 302
Y DVWS GV+LY M RLPFDD + L K + V P P + K +L
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 248
Query: 303 SKIFSPIKFRIRLKDIKQDPWVKTE 327
I +P+ RI + +I QD W K +
Sbjct: 249 --IVNPLN-RISIHEIMQDDWFKVD 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 145/265 (54%), Gaps = 13/265 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K +G GS+ VKLA T G VA+K+++K ++ + REI ++ LRHP+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+I+ I++ + +++EYA L D+I + + E +++F+Q++ A++YCH +
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D N+K++DFG + T CGS YA+PE++ G
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMT------DGNFLKTSCGSPNYAAPEVISGKL 187
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKV-VFP--TEPNVSAECKTLL 302
Y DVWS GV+LY M RLPFDD + L K + V P P + K +L
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 247
Query: 303 SKIFSPIKFRIRLKDIKQDPWVKTE 327
I +P+ RI + +I QD W K +
Sbjct: 248 --IVNPLN-RISIHEIMQDDWFKVD 269
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K +G GS+ VKLA T G VA+K+++K ++ + REI ++ LRHP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+I+ I++ + +++EYA L D+I + + E +++F+Q++ A++YCH +
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D N+K++DFG + G+ T CGS YA+PE++ G
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSN---IMTDGN---FLKTSCGSPNYAAPEVISGKL 178
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKV-VFP--TEPNVSAECKTLL 302
Y DVWS GV+LY M RLPFDD + L K + V P P + K +L
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 238
Query: 303 SKIFSPIKFRIRLKDIKQDPWVKTE 327
I +P+ RI + +I QD W K +
Sbjct: 239 --IVNPLN-RISIHEIMQDDWFKVD 260
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K +G GS+ VKLA T G VA+K+++K ++ + REI ++ LRHP+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+I+ I++ + +++EYA L D+I + + E +++F+Q++ A++YCH +
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+K ENLL+D N+K++DFG + G+ T CGS YA+PE++ G
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSN---IMTDGN---FLKTSCGSPNYAAPEVISGKL 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKV-VFP--TEPNVSAECKTLL 302
Y DVWS GV+LY M RLPFDD + L K + V P P + K +L
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 242
Query: 303 SKIFSPIKFRIRLKDIKQDPWVKTE 327
I +P+ RI + +I QD W K +
Sbjct: 243 --IVNPLN-RISIHEIMQDDWFKVD 264
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 153/278 (55%), Gaps = 19/278 (6%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
K+K T+ + + +G+ +G G + V LA ++ +A+KV+ K + + ++ L RE
Sbjct: 9 KRKFTIDD---FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRRE 65
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
I++ LRHPN++R R+Y+++E+A +G L +Q+ G DE R+ + +L
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA 125
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL-SDTFCGSY 233
DA+ YCHER V+HRDIK ENLL+ + +K++DFG+ S H L CG+
Sbjct: 126 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTL 177
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEP 292
Y PE+++G + D+W GV+ Y G PFD ++ + ++ V + FP P
Sbjct: 178 DYLPPEMIEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--P 234
Query: 293 NVSAECKTLLSKI--FSPIKFRIRLKDIKQDPWVKTEA 328
+S K L+SK+ + P + R+ LK + + PWVK +
Sbjct: 235 FLSDGSKDLISKLLRYHPPQ-RLPLKGVMEHPWVKANS 271
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 153/278 (55%), Gaps = 19/278 (6%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
K+K T+ + + +G+ +G G + V LA ++ +A+KV+ K + + ++ L RE
Sbjct: 8 KRKFTIDD---FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRRE 64
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
I++ LRHPN++R R+Y+++E+A +G L +Q+ G DE R+ + +L
Sbjct: 65 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA 124
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL-SDTFCGSY 233
DA+ YCHER V+HRDIK ENLL+ + +K++DFG+ S H L CG+
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTL 176
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEP 292
Y PE+++G + D+W GV+ Y G PFD ++ + ++ V + FP P
Sbjct: 177 DYLPPEMIEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--P 233
Query: 293 NVSAECKTLLSKI--FSPIKFRIRLKDIKQDPWVKTEA 328
+S K L+SK+ + P + R+ LK + + PWVK +
Sbjct: 234 FLSDGSKDLISKLLRYHPPQ-RLPLKGVMEHPWVKANS 270
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 140/267 (52%), Gaps = 20/267 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++ +L + VAVK + + E + +K REI + LRHPN
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSLRHPN 75
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++RF + I T + I+MEYA G L + I G E + +F+QL+ + YCH V
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 186 VHRDIKCENLLIDGE--YNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
HRD+K EN L+DG +K+ DFG+++ + H P S G+ AY +PE+L
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL----HSQPKSTV--GTPAYIAPEVLLK 189
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDD----TNYIQLLKQV-QTKVVFPTEPNVSAEC 298
Y +DVWS GV LY M G PF+D N+ + + ++ + P ++S EC
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 249
Query: 299 KTLLSKIF--SPIKFRIRLKDIKQDPW 323
+ L+S+IF P K RI + +I+ W
Sbjct: 250 RHLISRIFVADPAK-RISIPEIRNHEW 275
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 20/267 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++ +L + VAVK + + E + + REI + LRHPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK----IAANVKREIINHRSLRHPN 76
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++RF + I T + I+MEYA G L + I G E + +F+QL+ + YCH V
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 186 VHRDIKCENLLIDGE--YNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
HRD+K EN L+DG +K+ DFG+++ + H P S G+ AY +PE+L
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL----HSQPKSTV--GTPAYIAPEVLLK 190
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQV-QTKVVFPTEPNVSAEC 298
Y +DVWS GV LY M G PF+D N+ + + ++ + P ++S EC
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 299 KTLLSKIF--SPIKFRIRLKDIKQDPW 323
+ L+S+IF P K RI + +I+ W
Sbjct: 251 RHLISRIFVADPAK-RISIPEIRNHEW 276
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 156/288 (54%), Gaps = 18/288 (6%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE
Sbjct: 2 KKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQ-SPLSDTFCGSY 233
+A+ YCH + V+HRDIK ENLL+ +K++DFG+ S H S DT CG+
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDTLCGTL 171
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPN 293
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 172 DYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDF 229
Query: 294 VSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 230 VTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 274
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 143/261 (54%), Gaps = 16/261 (6%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V LA ++ +A+KV+ K + + ++ L REI++ LRHPN++R
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
R+Y+++E+A +G L +Q+ G DE R+ + +L DA+ YCHER V+HRDIK
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL-SDTFCGSYAYASPEILKGVPYTPHY 250
ENLL+ + +K++DFG+ S H L CG+ Y PE+++G +
Sbjct: 142 PENLLMGYKGELKIADFGW--------SVHAPSLRRRXMCGTLDYLPPEMIEGKTHD-EK 192
Query: 251 SDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTLLSKI--FS 307
D+W GV+ Y G PFD ++ + ++ V + FP P +S K L+SK+ +
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PFLSDGSKDLISKLLRYH 250
Query: 308 PIKFRIRLKDIKQDPWVKTEA 328
P + R+ LK + + PWVK +
Sbjct: 251 PPQ-RLPLKGVMEHPWVKANS 270
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 158/289 (54%), Gaps = 16/289 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 4 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA +G + +Q+ DE RT + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGT 174
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 175 LDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 232
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 233 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 278
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 158/289 (54%), Gaps = 16/289 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 16 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 73
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 133
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+
Sbjct: 134 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGT 186
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 187 LDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 244
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 245 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 290
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 139/267 (52%), Gaps = 20/267 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++ +L + VAVK + + E + +K REI + LRHPN
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK----REIINHRSLRHPN 76
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++RF + I T + I+MEYA G L + I G E + +F+QL+ + Y H V
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 186 VHRDIKCENLLIDGE--YNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
HRD+K EN L+DG +K++DFG++ K H P S G+ AY +PE+L
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYS----KASVLHSQPKSAV--GTPAYIAPEVLLK 190
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQV-QTKVVFPTEPNVSAEC 298
Y +DVWS GV LY M G PF+D N+ + + ++ + P ++S EC
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 299 KTLLSKIF--SPIKFRIRLKDIKQDPW 323
+ L+S+IF P K RI + +I+ W
Sbjct: 251 RHLISRIFVADPAK-RISIPEIRNHEW 276
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 152/274 (55%), Gaps = 14/274 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 25 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 82
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 142
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGT 195
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 196 LDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 253
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
V+ + L+S++ +P + R L+++ + PW+
Sbjct: 254 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWI 286
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 136/265 (51%), Gaps = 16/265 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++ +L + VAVK + + E + +K REI + LRHPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSLRHPN 76
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++RF + I T + I+MEYA G L + I G E + +F+QL+ + YCH V
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRD+K EN L+DG +L F G+ K H P S G+ AY +PE+L
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAF--GYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKE 192
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQV-QTKVVFPTEPNVSAECKT 300
Y +DVWS GV LY M G PF+D N+ + + ++ + P ++S EC+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 301 LLSKIF--SPIKFRIRLKDIKQDPW 323
L+S+IF P K RI + +I+ W
Sbjct: 253 LISRIFVADPAK-RISIPEIRNHEW 276
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 156/290 (53%), Gaps = 18/290 (6%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 25 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 82
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 142
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQ-SPLSDTFCG 231
L +A+ YCH + V+HRDIK ENLL+ +K++DFG+ S H S D CG
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDDLCG 194
Query: 232 SYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTE 291
+ Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 195 TLDYLPPEMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFP 252
Query: 292 PNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 253 DFVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 299
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 158/289 (54%), Gaps = 16/289 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 2 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGT 172
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 173 LDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 230
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 231 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 137/265 (51%), Gaps = 16/265 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y L K IG G++ +L + VAVK + + E + +K REI + LRHPN
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK----REIINHRSLRHPN 76
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++RF + I T + I+MEYA G L + I G E + +F+QL+ + YCH V
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRD+K EN L+DG +L F G+ K H P DT G+ AY +PE+L
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAF--GYSKSSVLHSQP-KDT-VGTPAYIAPEVLLKKE 192
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQV-QTKVVFPTEPNVSAECKT 300
Y +DVWS GV LY M G PF+D N+ + + ++ + P ++S EC+
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 301 LLSKIF--SPIKFRIRLKDIKQDPW 323
L+S+IF P K RI + +I+ W
Sbjct: 253 LISRIFVADPAK-RISIPEIRNHEW 276
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 158/289 (54%), Gaps = 16/289 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 4 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGT 174
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 175 LDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 232
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 233 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 278
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 157/289 (54%), Gaps = 16/289 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 4 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGT 174
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE ++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 175 LDYLPPEXIEGRXHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 232
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 233 FVTEGARDLISRLLKHNPSQ-RPXLREVLEHPWIT--ANSSKPSNCQNK 278
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 152/274 (55%), Gaps = 14/274 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 2 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGT 172
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 173 LDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 230
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
V+ + L+S++ +P + R L+++ + PW+
Sbjct: 231 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 148/276 (53%), Gaps = 14/276 (5%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE+
Sbjct: 6 KRQWTLED--FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREV 63
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQ-SPLSDTFCGSYA 234
A+ YCH + V+HRDIK ENLL+ +K++DFG+ S H S DT CG+
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW--------SVHAPSSRRDTLCGTLD 175
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y PE+++G + D+WS+GV+ Y G PF+ Y + +++ ++V F V
Sbjct: 176 YLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI-SRVEFTFPDFV 233
Query: 295 SAECKTLLSKIFSP-IKFRIRLKDIKQDPWVKTEAN 329
+ + L+S++ R+ L ++ + PW+K ++
Sbjct: 234 TEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 157/287 (54%), Gaps = 16/287 (5%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE
Sbjct: 6 KKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 63
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
+A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ L CG+
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDL----CGTLD 176
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V
Sbjct: 177 YLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFV 234
Query: 295 SAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 235 TEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 278
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 157/287 (54%), Gaps = 16/287 (5%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE
Sbjct: 2 KKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
+A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ L CG+
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDL----CGTLD 172
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V
Sbjct: 173 YLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFV 230
Query: 295 SAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 231 TEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 274
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 158/289 (54%), Gaps = 16/289 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 1 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K+++FG++ + S ++ T CG+
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRT----TLCGT 171
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 172 LDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 229
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 230 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 275
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 157/287 (54%), Gaps = 16/287 (5%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE
Sbjct: 1 KKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
+A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ L CG+
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDL----CGTLD 171
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V
Sbjct: 172 YLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFV 229
Query: 295 SAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 230 TEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 273
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 157/289 (54%), Gaps = 16/289 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 1 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S + L CG+
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXL----CGT 171
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 172 LDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 229
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 230 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 275
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 157/289 (54%), Gaps = 15/289 (5%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE
Sbjct: 2 KKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 59
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
+A+ YCH + V+HRDIK ENLL+ +K++DFG++ C + S T G+
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-----CHA--PSSRRTTLSGTLD 172
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V
Sbjct: 173 YLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFV 230
Query: 295 SAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEAN-PAASAGVETKT 340
+ + L+S++ +P + R L+++ + PW+ ++ P+ S E+ +
Sbjct: 231 TEGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSSKPSNSQNKESAS 278
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 151/276 (54%), Gaps = 14/276 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ +G+ +G G + V LA + +A+KV+ K + ++ L RE+++ LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++R RVY+I+EYA G++ +Q+ DE RT + +L +A+ YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRDIK ENLL+ +K++DFG++ + S ++ T CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGTLDYLPPEMIEGRM 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
+ D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+ + L+S++
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLISRL 240
Query: 306 F--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
+P + R L+++ + PW+ AN + + + K
Sbjct: 241 LKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 273
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 152/274 (55%), Gaps = 14/274 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 2 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K+++FG++ + S ++ T CG+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRT----TLCGT 172
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 173 LDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 230
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
V+ + L+S++ +P + R L+++ + PW+
Sbjct: 231 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 152/276 (55%), Gaps = 14/276 (5%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE+
Sbjct: 6 KRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 63
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 123
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+ Y
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGTLDY 176
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+
Sbjct: 177 LPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVT 234
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEAN 329
+ L+S++ +P + R L+++ + PW+ ++
Sbjct: 235 EGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 269
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 150/271 (55%), Gaps = 14/271 (5%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE+
Sbjct: 1 KRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 58
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 59 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 118
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+ Y
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGTLDY 171
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+
Sbjct: 172 LPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVT 229
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ L+S++ +P + R L+++ + PW+
Sbjct: 230 EGARDLISRLLKHNPSQ-RPMLREVLEHPWI 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 145/261 (55%), Gaps = 12/261 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ +G+ +G G + V LA + +A+KV+ K + ++ L RE+++ LRHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++R RVY+I+EYA G++ +Q+ DE RT + +L +A+ YCH + V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRDIK ENLL+ +K++DFG++ + S ++ L CG+ Y PE+++G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAAL----CGTLDYLPPEMIEGRM 185
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
+ D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+ + L+S++
Sbjct: 186 HDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLISRL 243
Query: 306 F--SPIKFRIRLKDIKQDPWV 324
+P + R L+++ + PW+
Sbjct: 244 LKHNPSQ-RPMLREVLEHPWI 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 151/274 (55%), Gaps = 14/274 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 2 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S + L CG+
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXL----CGT 172
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 173 LDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 230
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
V+ + L+S++ +P + R L+++ + PW+
Sbjct: 231 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWI 263
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 151/276 (54%), Gaps = 14/276 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ +G+ +G G + V LA + +A+KV+ K + ++ L RE+++ LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++R RVY+I+EYA G++ +Q+ DE RT + +L +A+ YCH + V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRDIK ENLL+ +K++DFG++ + S ++ L CG+ Y PE+++G
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTEL----CGTLDYLPPEMIEGRM 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
+ D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+ + L+S++
Sbjct: 183 HDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLISRL 240
Query: 306 F--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
+P + R L+++ + PW+ AN + + + K
Sbjct: 241 LKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 273
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 147/266 (55%), Gaps = 12/266 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ +G+ +G G + V LA + +A+KV+ K + ++ L RE+++ LRHPN
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++R RVY+I+EYA G++ +Q+ DE RT + +L +A+ YCH + V
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRDIK ENLL+ +K++DFG++ + S ++ T CG+ Y PE+++G
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRT----TLCGTLDYLPPEMIEGRM 179
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
+ D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+ + L+S++
Sbjct: 180 HDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLISRL 237
Query: 306 F--SPIKFRIRLKDIKQDPWVKTEAN 329
+P + R L+++ + PW+ ++
Sbjct: 238 LKHNPSQ-RPMLREVLEHPWITANSS 262
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 156/286 (54%), Gaps = 16/286 (5%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE+
Sbjct: 2 KRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ L CG+ Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDL----CGTLDY 172
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+
Sbjct: 173 LPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVT 230
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
+ L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 231 EGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 273
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 137/266 (51%), Gaps = 18/266 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y K IG G++ +L VAVK + + A + + + REI + LRHPN
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRSLRHPN 77
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++RF + I T + IIMEYA G L + I G E + +F+QL+ + YCH +
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 186 VHRDIKCENLLIDGE--YNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
HRD+K EN L+DG +K+ DFG+++ + H P S G+ AY +PE+L
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL----HSQPKSTV--GTPAYIAPEVLLR 191
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQV-QTKVVFPTEPNVSAEC 298
Y +DVWS GV LY M G PF+D +Y + ++++ K P + +S EC
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251
Query: 299 KTLLSKIF-SPIKFRIRLKDIKQDPW 323
L+S+IF + RI + +IK W
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSW 277
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 145/267 (54%), Gaps = 14/267 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ +G+ +G G + V LA + +A+KV+ K + ++ L RE+++ LRHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++R RVY+I+EYA G++ +Q+ DE RT + +L +A+ YCH + V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQ-SPLSDTFCGSYAYASPEILKGV 244
+HRDIK ENLL+ +K++DFG+ S H S D CG+ Y PE+++G
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 245 PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+ D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+ + L+S+
Sbjct: 185 MHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVTEGARDLISR 242
Query: 305 IF--SPIKFRIRLKDIKQDPWVKTEAN 329
+ +P + R L+++ + PW+ ++
Sbjct: 243 LLKHNPSQ-RPMLREVLEHPWITANSS 268
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 149/275 (54%), Gaps = 12/275 (4%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE+
Sbjct: 6 KRQWTLED--FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREV 63
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ T CG+ Y
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRT----TLCGTLDY 176
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
PE+++G + D+WS+GV+ Y G PF+ Y + +++ ++V F V+
Sbjct: 177 LPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI-SRVEFTFPDFVT 234
Query: 296 AECKTLLSKIFSP-IKFRIRLKDIKQDPWVKTEAN 329
+ L+S++ R+ L ++ + PW+K ++
Sbjct: 235 EGARDLISRLLKHNASQRLTLAEVLEHPWIKANSS 269
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 150/271 (55%), Gaps = 14/271 (5%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE+
Sbjct: 2 KRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ L CG+ Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAAL----CGTLDY 172
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+
Sbjct: 173 LPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVT 230
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ L+S++ +P + R L+++ + PW+
Sbjct: 231 EGARDLISRLLKHNPSQ-RPMLREVLEHPWI 260
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 156/289 (53%), Gaps = 16/289 (5%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
+ KK+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L
Sbjct: 4 ESKKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
RE+++ LRHPN++R RVY+I+EYA +G + +Q+ DE RT + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
L +A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S + L G+
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLX----GT 174
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
Y PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F
Sbjct: 175 LDYLPPEMIEGRMHDEKV-DLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPD 232
Query: 293 NVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEANPAASAGVETK 339
V+ + L+S++ +P + R L+++ + PW+ AN + + + K
Sbjct: 233 FVTEGARDLISRLLKHNPSQ-RPMLREVLEHPWIT--ANSSKPSNCQNK 278
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 152/276 (55%), Gaps = 14/276 (5%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE+
Sbjct: 2 KRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ L CG+ Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXL----CGTLDY 172
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+
Sbjct: 173 LPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVT 230
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEAN 329
+ L+S++ +P + R L+++ + PW+ ++
Sbjct: 231 EGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 151/276 (54%), Gaps = 14/276 (5%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA +A+KV+ K + ++ L RE+
Sbjct: 2 KRQWALED--FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R + RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S ++ L CG+ Y
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAAL----CGTLDY 172
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
PE+++G + D+WS+GV+ Y G+ PF+ Y K++ ++V F V+
Sbjct: 173 LPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI-SRVEFTFPDFVT 230
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEAN 329
+ L+S++ +P + R L+++ + PW+ ++
Sbjct: 231 EGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 151/276 (54%), Gaps = 14/276 (5%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
K+ +E+ + +G+ +G G + V LA + +A+KV+ K + ++ L RE+
Sbjct: 2 KRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ LRHPN++R RVY+I+EYA G++ +Q+ DE RT + +L +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
A+ YCH + V+HRDIK ENLL+ +K++DFG++ + S + L CG+ Y
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXL----CGTLDY 172
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
PE+++G + D+WS+GV+ Y G+ PF+ Y + K++ ++V F V+
Sbjct: 173 LPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-SRVEFTFPDFVT 230
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVKTEAN 329
+ L+S++ +P + R L+++ + PW+ ++
Sbjct: 231 EGARDLISRLLKHNPSQ-RPMLREVLEHPWITANSS 265
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 143/267 (53%), Gaps = 16/267 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ +G+ +G G + V LA + VA+KV+ K + + ++ L REI++ L HPN
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++R R+Y+I+EYA +G L +Q+ DE RT +L DA+ YCH + V
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL-SDTFCGSYAYASPEILKGV 244
+HRDIK ENLL+ + +K++DFG+ S H L T CG+ Y PE+++G
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGW--------SVHAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 245 PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTLLS 303
+ D+W +GV+ Y + G PF+ ++ + ++ V+ + FP +V + L+S
Sbjct: 197 MHN-EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA--SVPTGAQDLIS 253
Query: 304 KIF--SPIKFRIRLKDIKQDPWVKTEA 328
K+ +P + R+ L + PWV+ +
Sbjct: 254 KLLRHNPSE-RLPLAQVSAHPWVRANS 279
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EIXINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRH 123
+ L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G+ HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKT 300
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 301 LLSKIFSPIKFRIRLKDIKQDPW 323
L + RI + DIK+D W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRH 123
+ L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G+ HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKT 300
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 301 LLSKIFSPIKFRIRLKDIKQDPW 323
L + RI + DIK+D W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRH 123
+ L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G+ HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKT 300
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 301 LLSKIFSPIKFRIRLKDIKQDPW 323
L + RI + DIK+D W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRH 123
+ L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G+ HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKT 300
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 301 LLSKIFSPIKFRIRLKDIKQDPW 323
L + RI + DIK+D W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRH 123
+ L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 64
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G+ HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKT 300
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 301 LLSKIFSPIKFRIRLKDIKQDPW 323
L + RI + DIK+D W
Sbjct: 242 LHKILVENPSARITIPDIKKDRW 264
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 12/263 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRH 123
+ L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 62
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G+ HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKT 300
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 239
Query: 301 LLSKIFSPIKFRIRLKDIKQDPW 323
L + RI + DIK+D W
Sbjct: 240 LHKILVENPSARITIPDIKKDRW 262
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 66
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 134/261 (51%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 66
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 148/284 (52%), Gaps = 18/284 (6%)
Query: 30 KSSSNKLDLDASSRSTLIAANKRDV---KKKSTVMENHGYVLGKVIGIGSYATVKLATST 86
K ++ ++D + S S A + +V K K V N L K++G G++ V L
Sbjct: 112 KQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYL-KLLGKGTFGKVILVKEK 170
Query: 87 RHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEY 145
G A+K++ K V D + L E V++ RHP L + +T R+ +MEY
Sbjct: 171 ATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEY 229
Query: 146 AEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH-ERGVVHRDIKCENLLIDGEYNIK 204
A G L + RE E R + + ++V A+DY H E+ VV+RD+K ENL++D + +IK
Sbjct: 230 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIK 289
Query: 205 LSDFGFARGHMKCKSGHQSPLS-DTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM 263
++DFG CK G + + TFCG+ Y +PE+L+ Y D W +GVV+Y M
Sbjct: 290 ITDFGL------CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYEM 342
Query: 264 AFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKIF 306
GRLPF + ++ +L + + ++ FP + E K+LLS +
Sbjct: 343 MCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLL 384
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 27/284 (9%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPRE 114
+ M + Y+ K++G G++ V L G A+K++ K V D + + E
Sbjct: 2 RAKVTMNDFDYL--KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-E 58
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
V++ RHP L A +T R+ +MEYA G L + RE E R + + ++V
Sbjct: 59 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIV 118
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSG-HQSPLSDTFCGSY 233
A++Y H R VV+RDIK ENL++D + +IK++DFG CK G TFCG+
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTP 172
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEP 292
Y +PE+L+ Y D W +GVV+Y M GRLPF + ++ +L + + ++ FP
Sbjct: 173 EYLAPEVLEDNDYG-RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR-- 229
Query: 293 NVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKTEANPAASAGV 336
+S E K+LL+ + +K+DP + P+ + V
Sbjct: 230 TLSPEAKSLLAGL------------LKKDPKQRLGGGPSDAKEV 261
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + L H N
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINAMLNHEN 66
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 145/285 (50%), Gaps = 20/285 (7%)
Query: 30 KSSSNKLDLDASSRSTLIAANKRDVK----KKSTVMENHGYVLGKVIGIGSYATVKLATS 85
K ++D + S S A + +V K M Y+ K++G G++ V L
Sbjct: 115 KQEEEEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYL--KLLGKGTFGKVILVKE 172
Query: 86 TRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIME 144
G A+K++ K V D + L E V++ RHP L + +T R+ +ME
Sbjct: 173 KATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTALKYSFQTHDRLCFVME 231
Query: 145 YAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH-ERGVVHRDIKCENLLIDGEYNI 203
YA G L + RE E R + + ++V A+DY H E+ VV+RD+K ENL++D + +I
Sbjct: 232 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 291
Query: 204 KLSDFGFARGHMKCKSGHQSPLS-DTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYA 262
K++DFG CK G + + TFCG+ Y +PE+L+ Y D W +GVV+Y
Sbjct: 292 KITDFGL------CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG-RAVDWWGLGVVMYE 344
Query: 263 MAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKIF 306
M GRLPF + ++ +L + + ++ FP + E K+LLS +
Sbjct: 345 MMCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLL 387
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 138/270 (51%), Gaps = 25/270 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + + E V++ RHP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
A +T R+ +MEYA G L + RE E R + + ++V A++Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSG-HQSPLSDTFCGSYAYASPEILKGVPYT 247
DIK ENL++D + +IK++DFG CK G TFCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKIF 306
D W +GVV+Y M GRLPF + ++ +L + + ++ FP +S E K+LL+ +
Sbjct: 184 -RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGL- 239
Query: 307 SPIKFRIRLKDIKQDPWVKTEANPAASAGV 336
+K+DP + P+ + V
Sbjct: 240 -----------LKKDPKQRLGGGPSDAKEV 258
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 138/270 (51%), Gaps = 25/270 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + + E V++ RHP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
A +T R+ +MEYA G L + RE E R + + ++V A++Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSG-HQSPLSDTFCGSYAYASPEILKGVPYT 247
DIK ENL++D + +IK++DFG CK G TFCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKIF 306
D W +GVV+Y M GRLPF + ++ +L + + ++ FP +S E K+LL+ +
Sbjct: 184 -RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGL- 239
Query: 307 SPIKFRIRLKDIKQDPWVKTEANPAASAGV 336
+K+DP + P+ + V
Sbjct: 240 -----------LKKDPKQRLGGGPSDAKEV 258
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 134/263 (50%), Gaps = 12/263 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRH 123
+ L + +G G+ V+LA + VAVK+V A P+ +KK EI + K L H
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNH 63
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G+ HRDIK ENLL+D N+K+SDFG A + ++ L + CG+ Y +PE+LK
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKT 300
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 240
Query: 301 LLSKIFSPIKFRIRLKDIKQDPW 323
L + RI + DIK+D W
Sbjct: 241 LHKILVENPSARITIPDIKKDRW 263
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 58 STVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDV 117
ST + + Y +V+G GS+ V L G + AVKV+SK + K+ L RE+ +
Sbjct: 43 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 102
Query: 118 VKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAI 177
+K L HPN+++ + E Y++ E G L D I E + RQ++ I
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 162
Query: 178 DYCHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
Y H+ +VHRD+K ENLL++ + NI++ DFG + H + + + G+
Sbjct: 163 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKI-----GTAY 216
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT-KVVF--PTE 291
Y +PE+L G DVWS GV+LY + G PF+ N +LK+V+ K F P
Sbjct: 217 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 274
Query: 292 PNVSAECKTLLSKIFSPI-KFRIRLKDIKQDPWVKTEANPAASAGV 336
VS K L+ K+ + + RI +D W++T S V
Sbjct: 275 KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV 320
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EIXINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + G+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 123/226 (54%), Gaps = 9/226 (3%)
Query: 48 AANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYL 107
A N R+ K S+ + + L +VIG GSYA V L + A++VV K D
Sbjct: 36 AMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDED 95
Query: 108 KKFLPREIDVV-KGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRT 166
++ E V + HP L+ +T R++ ++EY G L+ +QR+ + E
Sbjct: 96 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA 155
Query: 167 KKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQ-SPL 225
+ + ++ A++Y HERG+++RD+K +N+L+D E +IKL+D+G CK G +
Sbjct: 156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDT 209
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFD 271
+ TFCG+ Y +PEIL+G Y D W++GV+++ M GR PFD
Sbjct: 210 TSTFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 58 STVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDV 117
ST + + Y +V+G GS+ V L G + AVKV+SK + K+ L RE+ +
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 118 VKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAI 177
+K L HPN+++ + E Y++ E G L D I E + RQ++ I
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 178 DYCHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
Y H+ +VHRD+K ENLL++ + NI++ DFG + H + + + G+
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKI-----GTAY 193
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT-KVVF--PTE 291
Y +PE+L G DVWS GV+LY + G PF+ N +LK+V+ K F P
Sbjct: 194 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
Query: 292 PNVSAECKTLLSKIFSPI-KFRIRLKDIKQDPWVKTEANPAASAGV 336
VS K L+ K+ + + RI +D W++T S V
Sbjct: 252 KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV 297
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 58 STVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDV 117
ST + + Y +V+G GS+ V L G + AVKV+SK + K+ L RE+ +
Sbjct: 44 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 103
Query: 118 VKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAI 177
+K L HPN+++ + E Y++ E G L D I E + RQ++ I
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 163
Query: 178 DYCHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
Y H+ +VHRD+K ENLL++ + NI++ DFG + H + + + G+
Sbjct: 164 TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKI-----GTAY 217
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT-KVVF--PTE 291
Y +PE+L G DVWS GV+LY + G PF+ N +LK+V+ K F P
Sbjct: 218 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 275
Query: 292 PNVSAECKTLLSKIFSPI-KFRIRLKDIKQDPWVKTEANPAASAGV 336
VS K L+ K+ + + RI +D W++T S V
Sbjct: 276 KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV 321
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EIXINKMLNHEN 66
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + G+ Y +PE+LK
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMXGTLPYVAPELLKRRE 183
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + G+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + G+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 122/226 (53%), Gaps = 9/226 (3%)
Query: 48 AANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYL 107
A N R+ K S+ + + L +VIG GSYA V L + A+KVV K D
Sbjct: 4 AMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED 63
Query: 108 KKFLPREIDVV-KGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRT 166
++ E V + HP L+ +T R++ ++EY G L+ +QR+ + E
Sbjct: 64 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA 123
Query: 167 KKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQ-SPL 225
+ + ++ A++Y HERG+++RD+K +N+L+D E +IKL+D+G CK G +
Sbjct: 124 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDT 177
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFD 271
+ FCG+ Y +PEIL+G Y D W++GV+++ M GR PFD
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYG-FSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 124/238 (52%), Gaps = 8/238 (3%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVV-KGLRHPNLIR 128
KVIG GS+ V LA AVKV+ K +K + E +V+ K ++HP L+
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ +T ++Y +++Y G L +QRE EPR + + ++ A+ Y H +V+R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTP 248
D+K EN+L+D + +I L+DFG + +++ S + TFCG+ Y +PE+L PY
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCKENIEHNST-----TSTFCGTPEYLAPEVLHKQPYD- 217
Query: 249 HYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIF 306
D W +G VLY M +G PF N ++ + K + +PN++ + LL +
Sbjct: 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-QLKPNITNSARHLLEGLL 274
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 135/280 (48%), Gaps = 22/280 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDY------LKKFLPREIDVVKGLRHPN 125
+G G++ V A +V VK + K + D L K + EI ++ + H N
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK-VTLEIAILSRVEHAN 90
Query: 126 LIRFLQAIETTHRVYIIMEYAEKG-SLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
+I+ L E ++ME G L FI R +DEP FRQLV A+ Y +
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
++HRDIK EN++I ++ IKL DFG A + K L TFCG+ Y +PE+L G
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK------LFYTFCGTIEYCAPEVLMGN 204
Query: 245 PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
PY ++WS+GV LY + F PF +L + V+ + P VS E +L+S
Sbjct: 205 PYRGPELEMWSLGVTLYTLVFEENPF-----CELEETVEAAIHPPY--LVSKELMSLVSG 257
Query: 305 IFSPI-KFRIRLKDIKQDPWVKTEANPAASAGVETKTLNQ 343
+ P+ + R L+ + DPWV N A E +N+
Sbjct: 258 LLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNK 297
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 124/224 (55%), Gaps = 10/224 (4%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+V+G GS+ V LA G AVKV+ K V D ++ + + + HP L +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+T R++ +ME+ G L+ IQ+ DE R + + +++ A+ + H++G+++R
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYR 148
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSD-TFCGSYAYASPEILKGVPYT 247
D+K +N+L+D E + KL+DFG CK G + ++ TFCG+ Y +PEIL+ + Y
Sbjct: 149 DLKLDNVLLDHEGHCKLADFGM------CKEGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPT 290
P D W+MGV+LY M G PF+ N L + + +VV+PT
Sbjct: 203 PAV-DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT 245
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 25/270 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + + E V++ RHP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
A +T R+ +MEYA G L + RE E R + + ++V A++Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSG-HQSPLSDTFCGSYAYASPEILKGVPYT 247
DIK ENL++D + +IK++DFG CK G FCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKIF 306
D W +GVV+Y M GRLPF + ++ +L + + ++ FP +S E K+LL+ +
Sbjct: 184 -RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGL- 239
Query: 307 SPIKFRIRLKDIKQDPWVKTEANPAASAGV 336
+K+DP + P+ + V
Sbjct: 240 -----------LKKDPKQRLGGGPSDAKEV 258
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 12/261 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRHPN 125
L + +G G+Y V+LA + VAVK+V A P+ +KK EI + K L H N
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK----EICINKMLNHEN 65
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++F + Y+ +EY G L D I+ + + EP +++F QL+ + Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
HRDIK ENLL+D N+K+SDFG A + ++ L + G+ Y +PE+LK
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA---TVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVF--PTEPNVSAECKTLL 302
+ DVWS G+VL AM G LP+D ++ Q + K + P + SA L
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 303 SKIFSPIKFRIRLKDIKQDPW 323
+ RI + DIK+D W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 141/294 (47%), Gaps = 15/294 (5%)
Query: 40 ASSRSTLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK 99
+S R L + ST + + Y +V+G GS+ V L G + AVKV+SK
Sbjct: 8 SSGRENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISK 67
Query: 100 VEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREG 159
+ K+ L RE+ ++K L HPN+++ + E Y++ E G L D I
Sbjct: 68 RQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 127
Query: 160 YIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMK 216
E + RQ++ I Y H+ +VHRD+K ENLL++ + NI++ DFG + H +
Sbjct: 128 RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFE 186
Query: 217 CKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI 276
+ + G+ Y +PE+L G DVWS GV+LY + G PF+ N
Sbjct: 187 ASKKMKDKI-----GTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEY 239
Query: 277 QLLKQVQT-KVVF--PTEPNVSAECKTLLSKIFSPI-KFRIRLKDIKQDPWVKT 326
+LK+V+ K F P VS K L+ K+ + + RI +D W++T
Sbjct: 240 DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 25/270 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + + E V++ RHP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
A +T R+ +MEYA G L + RE E R + + ++V A++Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSG-HQSPLSDTFCGSYAYASPEILKGVPYT 247
DIK ENL++D + +IK++DFG CK G FCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKIF 306
D W +GVV+Y M GRLPF + ++ +L + + ++ FP +S E K+LL+ +
Sbjct: 184 -RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGL- 239
Query: 307 SPIKFRIRLKDIKQDPWVKTEANPAASAGV 336
+K+DP + P+ + V
Sbjct: 240 -----------LKKDPKQRLGGGPSDAKEV 258
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 25/270 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + + E V++ RHP L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 69
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
A +T R+ +MEYA G L + RE E R + + ++V A++Y H R VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSG-HQSPLSDTFCGSYAYASPEILKGVPYT 247
DIK ENL++D + +IK++DFG CK G FCG+ Y +PE+L+ Y
Sbjct: 130 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKIF 306
D W +GVV+Y M GRLPF + ++ +L + + ++ FP +S E K+LL+ +
Sbjct: 184 -RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGL- 239
Query: 307 SPIKFRIRLKDIKQDPWVKTEANPAASAGV 336
+K+DP + P+ + V
Sbjct: 240 -----------LKKDPKQRLGGGPSDAKEV 258
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 137/270 (50%), Gaps = 25/270 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + + E V++ RHP L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHPFLTA 74
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
A +T R+ +MEYA G L + RE E R + + ++V A++Y H R VV+R
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 134
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSG-HQSPLSDTFCGSYAYASPEILKGVPYT 247
DIK ENL++D + +IK++DFG CK G FCG+ Y +PE+L+ Y
Sbjct: 135 DIKLENLMLDKDGHIKITDFGL------CKEGISDGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKIF 306
D W +GVV+Y M GRLPF + ++ +L + + ++ FP +S E K+LL+ +
Sbjct: 189 -RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGL- 244
Query: 307 SPIKFRIRLKDIKQDPWVKTEANPAASAGV 336
+K+DP + P+ + V
Sbjct: 245 -----------LKKDPKQRLGGGPSDAKEV 263
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 136/286 (47%), Gaps = 15/286 (5%)
Query: 58 STVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDV 117
ST + + Y +V+G GS+ V L G + AVKV+SK + K+ L RE+ +
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 118 VKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAI 177
+K L HPN+ + + E Y++ E G L D I E + RQ++ I
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 178 DYCHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
Y H+ +VHRD+K ENLL++ + NI++ DFG + H + + + G+
Sbjct: 140 TYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKXKDKI-----GTAY 193
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT-KVVF--PTE 291
Y +PE+L G DVWS GV+LY + G PF+ N +LK+V+ K F P
Sbjct: 194 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQW 251
Query: 292 PNVSAECKTLLSKIFSPI-KFRIRLKDIKQDPWVKTEANPAASAGV 336
VS K L+ K + + RI +D W++T S V
Sbjct: 252 KKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISVDV 297
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 126/225 (56%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + +++F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANSFVGTAQYVSPELLTEKS 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
+ SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 211 ASKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 125/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + +++F G+ Y SPE+L
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANSFVGTAQYVSPELLTEKS 211
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 212 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 255
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 142/293 (48%), Gaps = 38/293 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK---VEAPPDYLKKFLPREIDVV---- 118
Y LG ++G G + TV VA+KV+ + + P P E+ ++
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 119 KGLRHPNLIRFLQAIETTHRVYIIMEYAEKGS-LLDFIQREGYIDEPRTKKWFRQLVDAI 177
G HP +IR L ET +++E L D+I +G + E ++ +F Q+V AI
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSG---HQSPLSDTFCGSY 233
+CH RGVVHRDIK EN+LID KL DFG SG H P +D F G+
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG---------SGALLHDEPYTD-FDGTR 202
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPN 293
Y+ PE + Y + VWS+G++LY M G +PF+ I ++ ++ FP +
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI-----LEAELHFPA--H 255
Query: 294 VSAECKTLLSKIFSP-IKFRIRLKDIKQDPWVKTEANPAASAGVETKTLNQSK 345
VS +C L+ + +P R L++I DPW++T A E LN SK
Sbjct: 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA--------EDVPLNPSK 300
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANAFVGTAQYVSPELLTEKS 208
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 209 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 125/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + +++F G+ Y SPE+L
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANSFVGTAQYVSPELLTEKS 207
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 208 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 209 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 209 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 211 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 185
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 186 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 229
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 192
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 193 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 236
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 211 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 124/226 (54%), Gaps = 5/226 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 213
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFPT 290
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 214 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPA 258
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 215
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 216 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 259
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 211
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 212 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 255
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 207
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 208 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 251
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 211 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 254
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 188
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 189 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 232
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 186
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 187 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 187
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 188 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 14/241 (5%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + L E V++ RHP L
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTA 73
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH-ERGVVH 187
+ +T R+ +MEYA G L + RE E R + + ++V A+DY H E+ VV+
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 133
Query: 188 RDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLS-DTFCGSYAYASPEILKGVPY 246
RD+K ENL++D + +IK++DFG CK G + + FCG+ Y +PE+L+ Y
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKI 305
D W +GVV+Y M GRLPF + ++ +L + + ++ FP + E K+LLS +
Sbjct: 188 G-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGL 244
Query: 306 F 306
Sbjct: 245 L 245
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 144/276 (52%), Gaps = 18/276 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y L + +G G+++ V+ G + A K++ +K + D+ K L RE + + L+HP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHP 81
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
N++R +I Y+I + G L + I Y E +Q+++A+ +CH+ G
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 185 VVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
VVHRD+K ENLL+ + +KL+DFG A ++ + Q+ F G+ Y SPE+L
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFG--FAGTPGYLSPEVL 196
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV-FPTEP--NVSAEC 298
+ PY D+W+ GV+LY + G PF D + +L +Q++ FP+ V+ E
Sbjct: 197 RKDPYGKPV-DLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 255
Query: 299 KTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAA 332
K L++K+ + P K RI + + PW+ + A+
Sbjct: 256 KDLINKMLTINPSK-RITAAEALKHPWISHRSTVAS 290
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 14/241 (5%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + L E V++ RHP L
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTA 72
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH-ERGVVH 187
+ +T R+ +MEYA G L + RE E R + + ++V A+DY H E+ VV+
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 132
Query: 188 RDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLS-DTFCGSYAYASPEILKGVPY 246
RD+K ENL++D + +IK++DFG CK G + + FCG+ Y +PE+L+ Y
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKI 305
D W +GVV+Y M GRLPF + ++ +L + + ++ FP + E K+LLS +
Sbjct: 187 G-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGL 243
Query: 306 F 306
Sbjct: 244 L 244
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 14/241 (5%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K++G G++ V L G A+K++ K V D + L E V++ RHP L
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-ENRVLQNSRHPFLTA 74
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH-ERGVVH 187
+ +T R+ +MEYA G L + RE E R + + ++V A+DY H E+ VV+
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 134
Query: 188 RDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLS-DTFCGSYAYASPEILKGVPY 246
RD+K ENL++D + +IK++DFG CK G + + FCG+ Y +PE+L+ Y
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGL------CKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 188
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKTLLSKI 305
D W +GVV+Y M GRLPF + ++ +L + + ++ FP + E K+LLS +
Sbjct: 189 G-RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGL 245
Query: 306 F 306
Sbjct: 246 L 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 26/271 (9%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK--VEAPPDYLKKFLPREIDVVKGLRH 123
Y V+G G+++ V LA R VA+K ++K +E ++ EI V+ ++H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME----NEIAVLHKIKH 75
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
PN++ E+ +Y+IM+ G L D I +G+ E + Q++DA+ Y H+
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 184 GVVHRDIKCENLL---IDGEYNIKLSDFGFARGHMKCKSGHQSPLS--DTFCGSYAYASP 238
G+VHRD+K ENLL +D + I +SDFG ++ + P S T CG+ Y +P
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--------MEDPGSVLSTACGTPGYVAP 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTEPNVS 295
E+L PY+ D WS+GV+ Y + G PF D N +L +Q+ + + P ++S
Sbjct: 188 EVLAQKPYSKAV-DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS 246
Query: 296 AECKTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K + + P K R + Q PW+
Sbjct: 247 DSAKDFIRHLMEKDPEK-RFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y V+G G+++ V LA R VA+K ++K + + + EI V+ ++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPN 77
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E+ +Y+IM+ G L D I +G+ E + Q++DA+ Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 186 VHRDIKCENLL---IDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VHRD+K ENLL +D + I +SDFG + K + T CG+ Y +PE+L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLS------KMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTEPNVSAECK 299
PY+ D WS+GV+ Y + G PF D N +L +Q+ + + P ++S K
Sbjct: 192 QKPYSKAV-DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 300 TLLSKIFS--PIKFRIRLKDIKQDPWV 324
+ + P K R + Q PW+
Sbjct: 251 DFIRHLMEKDPEK-RFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y V+G G+++ V LA R VA+K ++K + + + EI V+ ++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPN 77
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E+ +Y+IM+ G L D I +G+ E + Q++DA+ Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 186 VHRDIKCENLL---IDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VHRD+K ENLL +D + I +SDFG + K + T CG+ Y +PE+L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLS------KMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTEPNVSAECK 299
PY+ D WS+GV+ Y + G PF D N +L +Q+ + + P ++S K
Sbjct: 192 QKPYSKAV-DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 300 TLLSKIFS--PIKFRIRLKDIKQDPWV 324
+ + P K R + Q PW+
Sbjct: 251 DFIRHLMEKDPEK-RFTCEQALQHPWI 276
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 123/225 (54%), Gaps = 5/225 (2%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++T LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 208
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN-YIQLLKQVQTKVVFP 289
SD+W++G ++Y + G PF N Y+ K ++ + FP
Sbjct: 209 ACKS-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP 252
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y V+G G+++ V LA R VA+K ++K + + + EI V+ ++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAK--EALEGKEGSMENEIAVLHKIKHPN 77
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E+ +Y+IM+ G L D I +G+ E + Q++DA+ Y H+ G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 186 VHRDIKCENLL---IDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VHRD+K ENLL +D + I +SDFG + K + T CG+ Y +PE+L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLS------KMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTEPNVSAECK 299
PY+ D WS+GV+ Y + G PF D N +L +Q+ + + P ++S K
Sbjct: 192 QKPYSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 300 TLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ + P K R + Q PW+
Sbjct: 251 DFIRHLMEKDPEK-RFTCEQALQHPWI 276
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN 274
SD+W++G ++Y + G PF N
Sbjct: 211 -AXKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 141/268 (52%), Gaps = 18/268 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y L + +G G+++ V+ G + A K++ +K + D+ K L RE + + L+HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHP 63
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
N++R +I Y++ + G L + I Y E +Q+++++++CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 185 VVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+VHRD+K ENLL+ + +KL+DFG A ++ + Q+ F G+ Y SPE+L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFG--FAGTPGYLSPEVL 178
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV-FPTEP--NVSAEC 298
+ PY D+W+ GV+LY + G PF D + +L +Q++ FP+ V+ E
Sbjct: 179 RKDPYGKPV-DMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 299 KTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K L++K+ + P K RI + + PW+
Sbjct: 238 KDLINKMLTINPAK-RITASEALKHPWI 264
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 116/209 (55%), Gaps = 4/209 (1%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ GK++G GS++TV LA + A+K++ K + ++ RE DV+ L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + ++Y + YA+ G LL +I++ G DE T+ + ++V A++Y H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K EN+L++ + +I+++DFG A+ + ++ F G+ Y SPE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTAQYVSPELLTEKS 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTN 274
SD+W++G ++Y + G PF N
Sbjct: 211 ACKS-SDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 131/266 (49%), Gaps = 24/266 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLK---KFLPREIDVVKGLRHPNL 126
+ +G G+++ V LA G AVK + P LK + EI V++ ++H N+
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCI-----PKKALKGKESSIENEIAVLRKIKHENI 82
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
+ E+ + +Y++M+ G L D I +G+ E RQ++DA+ Y H G+V
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIV 142
Query: 187 HRDIKCENLLI---DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
HRD+K ENLL D E I +SDFG ++ M+ K S T CG+ Y +PE+L
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSK--MEGKGDVMS----TACGTPGYVAPEVLAQ 196
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTEPNVSAECKT 300
PY+ D WS+GV+ Y + G PF D N +L +Q+ + + P ++S K
Sbjct: 197 KPYSKAV-DCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKD 255
Query: 301 LLSKIFS--PIKFRIRLKDIKQDPWV 324
+ + P K R + + PW+
Sbjct: 256 FIRNLMEKDPNK-RYTCEQAARHPWI 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 137/269 (50%), Gaps = 21/269 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y + + +G G+++ V+ G + A K++ +K + D+ K L RE + + L+HP
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHP 88
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLL-DFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N++R +I+ Y++ + G L D + RE Y E +Q++++I YCH
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY-SEADASHCIQQILESIAYCHSN 147
Query: 184 GVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
G+VHR++K ENLL+ + +KL+DFG A ++ H F G+ Y SPE+
Sbjct: 148 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH------GFAGTPGYLSPEV 201
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV---FPTEPNVSAE 297
LK PY+ D+W+ GV+LY + G PF D + +L Q++ P V+ E
Sbjct: 202 LKKDPYSKPV-DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 260
Query: 298 CKTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K+L+ + + P K RI + PW+
Sbjct: 261 AKSLIDSMLTVNPKK-RITADQALKVPWI 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 121/219 (55%), Gaps = 14/219 (6%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ TV A HG DVAVK++ + + + + +FL RE+ ++K LRHPN++ F+
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIVLFMG 101
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREG---YIDEPRTKKWFRQLVDAIDYCHERG--VV 186
A+ + I+ EY +GSL + + G +DE R + ++Y H R +V
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL+D +Y +K+ DFG +R +K S + G+ + +PE+L+ P
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXA---AGTPEWMAPEVLRDEPS 216
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
SDV+S GV+L+ +A + P+ + N Q++ V K
Sbjct: 217 N-EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 152/297 (51%), Gaps = 53/297 (17%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFL-------------- 111
Y L IG GSY VKLA + A+KV+SK KK +
Sbjct: 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSK--------KKLIRQAGFPRRPPPRGT 66
Query: 112 ---------PR--------EIDVVKGLRHPNLIRFLQAIETTHR--VYIIMEYAEKGSLL 152
PR EI ++K L HPN+++ ++ ++ + +Y++ E +G ++
Sbjct: 67 RPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM 126
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR 212
+ + + E + + +F+ L+ I+Y H + ++HRDIK NLL+ + +IK++DFG +
Sbjct: 127 E-VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 213 GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP--YTPHYSDVWSMGVVLYAMAFGRLPF 270
G + LS+T G+ A+ +PE L ++ DVW+MGV LY FG+ PF
Sbjct: 186 EF----KGSDALLSNT-VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
Query: 271 DDTNYIQLLKQVQTKVV-FPTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
D + L +++++ + FP +P+++ + K L++++ +P + RI + +IK PWV
Sbjct: 241 MDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNP-ESRIVVPEIKLHPWV 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 122/219 (55%), Gaps = 14/219 (6%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ TV A HG DVAVK++ + + + + +FL RE+ ++K LRHPN++ F+
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHPNIVLFMG 101
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREG---YIDEPRTKKWFRQLVDAIDYCHERG--VV 186
A+ + I+ EY +GSL + + G +DE R + ++Y H R +V
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HR++K NLL+D +Y +K+ DFG +R +K + S + G+ + +PE+L+ P
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSR--LKASTFLS---SKSAAGTPEWMAPEVLRDEPS 216
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
SDV+S GV+L+ +A + P+ + N Q++ V K
Sbjct: 217 N-EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 9/208 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVV-KGLRHP 124
+ L +VIG GSYA V L + A+KVV K D ++ E V + HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
L+ +T R++ ++EY G L+ +QR+ + E + + ++ A++Y HERG
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQ-SPLSDTFCGSYAYASPEILKG 243
+++RD+K +N+L+D E +IKL+D+G CK G + + FCG+ Y +PEIL+G
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFD 271
Y D W++GV+++ M GR PFD
Sbjct: 181 EDYG-FSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 141/268 (52%), Gaps = 18/268 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y L + +G G+++ V+ G + A K++ +K + D+ K L RE + + L+HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHP 63
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
N++R +I Y++ + G L + I Y E +Q+++++++CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 185 VVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+VHRD+K ENLL+ + +KL+DFG A ++ + Q+ F G+ Y SPE+L
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQGDQQAWFG--FAGTPGYLSPEVL 178
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV-FPTEP--NVSAEC 298
+ PY D+W+ GV+LY + G PF D + +L +Q++ FP+ V+ E
Sbjct: 179 RKDPYGKPV-DMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 299 KTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K L++K+ + P K RI + + PW+
Sbjct: 238 KDLINKMLTINPAK-RITASEALKHPWI 264
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 143/276 (51%), Gaps = 18/276 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y L + +G G+++ V+ G + A ++ +K + D+ K L RE + + L+HP
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK--LEREARICRLLKHP 70
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
N++R +I Y+I + G L + I Y E +Q+++A+ +CH+ G
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 185 VVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
VVHR++K ENLL+ + +KL+DFG A ++ + Q+ F G+ Y SPE+L
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFG--FAGTPGYLSPEVL 185
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV-FPTEP--NVSAEC 298
+ PY D+W+ GV+LY + G PF D + +L +Q++ FP+ V+ E
Sbjct: 186 RKDPYGKPV-DLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244
Query: 299 KTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAA 332
K L++K+ + P K RI + + PW+ + A+
Sbjct: 245 KDLINKMLTINPSK-RITAAEALKHPWISHRSTVAS 279
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 9/208 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVV-KGLRHP 124
+ L +VIG GSYA V L + A+KVV K D ++ E V + HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
L+ +T R++ ++EY G L+ +QR+ + E + + ++ A++Y HERG
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQ-SPLSDTFCGSYAYASPEILKG 243
+++RD+K +N+L+D E +IKL+D+G CK G + + FCG+ Y +PEIL+G
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGM------CKEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFD 271
Y D W++GV+++ M GR PFD
Sbjct: 185 EDYG-FSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 17/230 (7%)
Query: 108 KKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK 167
KK + EI V+ L HPN+I+ + ET + +++E G L D I +GY E
Sbjct: 92 KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA 151
Query: 168 KWFRQLVDAIDYCHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSP 224
+Q+++A+ Y HE G+VHRD+K ENLL + +K++DFG + K
Sbjct: 152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS------KIVEHQV 205
Query: 225 LSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ--- 281
L T CG+ Y +PEIL+G Y P D+WS+G++ Y + G PF D Q + +
Sbjct: 206 LMKTVCGTPGYCAPEILRGCAYGPEV-DMWSVGIITYILLCGFEPFYDERGDQFMFRRIL 264
Query: 282 -VQTKVVFPTEPNVSAECKTLLSK--IFSPIKFRIRLKDIKQDPWVKTEA 328
+ + P VS K L+ K + P K R+ Q PWV +A
Sbjct: 265 NCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK-RLTTFQALQHPWVTGKA 313
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 137/267 (51%), Gaps = 29/267 (10%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK--VEAPPDYLKKFLPREIDVVKGLRH 123
++ + +G G++ V L G + +K ++K + P + ++ EI+V+K L H
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA----EIEVLKSLDH 79
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI----QREGYIDEPRTKKWFRQLVDAIDY 179
PN+I+ + E H +YI+ME E G LL+ I R + E + +Q+++A+ Y
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 180 CHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYA 236
H + VVH+D+K EN+L IK+ DFG A KS S + G+ Y
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE---LFKSDEHSTNA---AGTALYM 193
Query: 237 SPEILK-GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
+PE+ K V + D+WS GVV+Y + G LPF T+ L++VQ K + EPN +
Sbjct: 194 APEVFKRDVTFK---CDIWSAGVVMYFLLTGCLPFTGTS----LEEVQQKATY-KEPNYA 245
Query: 296 AECKTLLSKIFSPIKFRIRLKDIKQDP 322
EC+ L + +K ++ KD ++ P
Sbjct: 246 VECRPLTPQAVDLLK-QMLTKDPERRP 271
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 137/269 (50%), Gaps = 21/269 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y + + +G G+++ V+ G + A K++ +K + D+ K L RE + + L+HP
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHP 65
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLL-DFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N++R +I+ Y++ + G L D + RE Y E +Q++++I YCH
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY-SEADASHCIQQILESIAYCHSN 124
Query: 184 GVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
G+VHR++K ENLL+ + +KL+DFG A ++ H F G+ Y SPE+
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH------GFAGTPGYLSPEV 178
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV---FPTEPNVSAE 297
LK PY+ D+W+ GV+LY + G PF D + +L Q++ P V+ E
Sbjct: 179 LKKDPYSKPV-DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 298 CKTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K+L+ + + P K RI + PW+
Sbjct: 238 AKSLIDSMLTVNPKK-RITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 137/269 (50%), Gaps = 21/269 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y + + +G G+++ V+ G + A K++ +K + D+ K L RE + + L+HP
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHP 65
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLL-DFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N++R +I+ Y++ + G L D + RE Y E +Q++++I YCH
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY-SEADASHCIQQILESIAYCHSN 124
Query: 184 GVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
G+VHR++K ENLL+ + +KL+DFG A ++ H F G+ Y SPE+
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH------GFAGTPGYLSPEV 178
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV---FPTEPNVSAE 297
LK PY+ D+W+ GV+LY + G PF D + +L Q++ P V+ E
Sbjct: 179 LKKDPYSKPV-DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 298 CKTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K+L+ + + P K RI + PW+
Sbjct: 238 AKSLIDSMLTVNPKK-RITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 137/269 (50%), Gaps = 21/269 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y + + +G G+++ V+ G + A K++ +K + D+ K L RE + + L+HP
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHP 64
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLL-DFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
N++R +I+ Y++ + G L D + RE Y E +Q++++I YCH
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY-SEADASHCIQQILESIAYCHSN 123
Query: 184 GVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
G+VHR++K ENLL+ + +KL+DFG A ++ H F G+ Y SPE+
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH------GFAGTPGYLSPEV 177
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV---FPTEPNVSAE 297
LK PY+ D+W+ GV+LY + G PF D + +L Q++ P V+ E
Sbjct: 178 LKKDPYSKPV-DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 236
Query: 298 CKTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K+L+ + + P K RI + PW+
Sbjct: 237 AKSLIDSMLTVNPKK-RITADQALKVPWI 264
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 31/273 (11%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLR-HPNLI 127
K +G GS++ + + AVK++SK +EA +EI +K HPN++
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ-------KEITALKLCEGHPNIV 69
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVH 187
+ + +++ME G L + I+++ + E R+LV A+ + H+ GVVH
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 188 RDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
RD+K ENLL E + IK+ DFGFAR K PL T C + YA+PE+L
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFAR----LKPPDNQPLK-TPCFTLHYAAPELLNQN 184
Query: 245 PYTPHYSDVWSMGVVLYAMAFGRLPFDD-------TNYIQLLKQVQT-KVVFPTEP--NV 294
Y D+WS+GV+LY M G++PF T+ ++++K+++ F E NV
Sbjct: 185 GYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNV 243
Query: 295 SAECKTLLSKIFS--PIKFRIRLKDIKQDPWVK 325
S E K L+ + + P K R+++ ++ + W++
Sbjct: 244 SQEAKDLIQGLLTVDPNK-RLKMSGLRYNEWLQ 275
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 132/263 (50%), Gaps = 13/263 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ +G ++G GS+A V A S G +VA+K++ K + + + E+ + L+HP+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ E ++ VY+++E G + +++ R E + + Q++ + Y H G
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
++HRD+ NLL+ NIK++DFG A + K H+ T CG+ Y SPEI
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLAT---QLKMPHEKHY--TLCGTPNYISPEIATRS 187
Query: 245 PYTPHYSDVWSMGVVLYAMAFGRLPFD-DTNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
+ SDVWS+G + Y + GR PFD DT L K V P+ +S E K L+
Sbjct: 188 AHGLE-SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF--LSIEAKDLIH 244
Query: 304 KIF--SPIKFRIRLKDIKQDPWV 324
++ +P R+ L + P++
Sbjct: 245 QLLRRNPAD-RLSLSSVLDHPFM 266
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 126/243 (51%), Gaps = 9/243 (3%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
YV + IG GS+ L ST G +K ++ + ++ RE+ V+ ++HPN
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEIN-ISRMSSKEREESRREVAVLANMKHPN 84
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFI--QREGYIDEPRTKKWFRQLVDAIDYCHER 183
++++ ++ E +YI+M+Y E G L I Q+ E + WF Q+ A+ + H+R
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
++HRDIK +N+ + + ++L DFG AR L+ G+ Y SPEI +
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIAR-----VLNSTVELARACIGTPYYLSPEICEN 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
PY + SD+W++G VLY + + F+ + L+ ++ + P + S + ++L+S
Sbjct: 200 KPYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVS 258
Query: 304 KIF 306
++F
Sbjct: 259 QLF 261
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 23/262 (8%)
Query: 63 NHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPP----DYLKKFLPREIDVV 118
N Y + +G G +TV LA T VA+K + PP + LK+F RE+
Sbjct: 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIF---IPPREKEETLKRF-EREVHNS 65
Query: 119 KGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAID 178
L H N++ + E Y++MEY E +L ++I+ G + + Q++D I
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK 125
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT--FCGSYAYA 236
+ H+ +VHRDIK +N+LID +K+ DFG A K+ ++ L+ T G+ Y
Sbjct: 126 HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA------KALSETSLTQTNHVLGTVQYF 179
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQL-LKQVQTKVVFPTEPNVS 295
SPE KG T +D++S+G+VLY M G PF+ + + +K +Q V PNV+
Sbjct: 180 SPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV-----PNVT 233
Query: 296 AECKTLLSKIFSPIKFRIRLKD 317
+ + + + S + R KD
Sbjct: 234 TDVRKDIPQSLSNVILRATEKD 255
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 136/272 (50%), Gaps = 36/272 (13%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSK--------VEAPPDYLKKFLPREIDVVKGL 121
+ +G GS+ V L S +G A+KV+ K VE D E ++ +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND--------ERLMLSIV 63
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
HP +IR + ++++IM+Y E G L +++ P K + ++ A++Y H
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+ +++RD+K EN+L+D +IK++DFGFA+ + ++ CG+ Y +PE++
Sbjct: 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAK--------YVPDVTYXLCGTPDYIAPEVV 175
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECKT 300
PY D WS G+++Y M G PF D+N ++ +++ ++ FP P + + K
Sbjct: 176 STKPYNKS-IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP--PFFNEDVKD 232
Query: 301 LLSKIFSPIKFRIRL-------KDIKQDPWVK 325
LLS++ + RL +D+K PW K
Sbjct: 233 LLSRLITR-DLSQRLGNLQNGTEDVKNHPWFK 263
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 139/268 (51%), Gaps = 18/268 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y L + IG G+++ V+ G + A K++ +K + D+ K L RE + + L+H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQK--LEREARICRLLKHS 63
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
N++R +I Y++ + G L + I Y E +Q+++A+ +CH+ G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 185 VVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
VVHRD+K ENLL+ + +KL+DFG A ++ + Q+ F G+ Y SPE+L
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGDQQAWFG--FAGTPGYLSPEVL 178
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV-FPTEP--NVSAEC 298
+ Y D+W+ GV+LY + G PF D + +L +Q++ FP+ V+ E
Sbjct: 179 RKEAYGKP-VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 299 KTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K L++++ + P K RI + + PWV
Sbjct: 238 KNLINQMLTINPAK-RITAHEALKHPWV 264
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 130/263 (49%), Gaps = 18/263 (6%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
++G GS+ V + AVKV++K A L RE++++K L HPN+++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-REVELLKKLDHPNIMKLF 87
Query: 131 QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDI 190
+ +E + YI+ E G L D I + E + +Q+ I Y H+ +VHRD+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 191 KCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYT 247
K EN+L++ + +IK+ DFG + + + + D +Y Y +PE+L+G
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQ-----NTKMKDRIGTAY-YIAPEVLRGT--Y 199
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT-KVVF--PTEPNVSAECKTLLSK 304
DVWS GV+LY + G PF N +LK+V+T K F P +S + K L+ K
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 305 I--FSPIKFRIRLKDIKQDPWVK 325
+ F P RI + PW++
Sbjct: 260 MLTFHP-SLRITATQCLEHPWIQ 281
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 14/262 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHP 124
++L K++G GS+ V LA + A+K + K V D ++ + + + HP
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
L +T ++ +MEY G L+ IQ D R + +++ + + H +G
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
+V+RD+K +N+L+D + +IK++DFG + +M + ++ FCG+ Y +PEIL G
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-----TNXFCGTPDYIAPEILLGQ 193
Query: 245 PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPN-VSAECKTLLS 303
Y H D WS GV+LY M G+ PF + +L ++ P P + E K LL
Sbjct: 194 KYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLV 250
Query: 304 KIF--SPIKFRIRLK-DIKQDP 322
K+F P K R+ ++ DI+Q P
Sbjct: 251 KLFVREPEK-RLGVRGDIRQHP 271
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ + K + T CG+ Y +PEI+ Y
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK---RVKGA-----TWTLCGTPEYLAPEIILSKGYNKA 239
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 240 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 296
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 297 DLTKRFGNLKNGVN--DIKNHKWFAT 320
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ T CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------TLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 20/286 (6%)
Query: 48 AANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYL 107
++ + ++ + T E + V ++G GS+ V + AVKV++K A
Sbjct: 8 SSGRENLYFQGTFAERYNIVC--MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT 65
Query: 108 KKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK 167
L RE++++K L HPN+++ + +E + YI+ E G L D I + E
Sbjct: 66 STIL-REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 168 KWFRQLVDAIDYCHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSP 224
+ +Q+ I Y H+ +VHRD+K EN+L++ + +IK+ DFG + + +
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-----NTK 179
Query: 225 LSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
+ D G+ Y +PE+L+G DVWS GV+LY + G PF N +LK+V+T
Sbjct: 180 MKDRI-GTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET 236
Query: 285 -KVVF--PTEPNVSAECKTLLSKI--FSPIKFRIRLKDIKQDPWVK 325
K F P +S + K L+ K+ F P RI + PW++
Sbjct: 237 GKYAFDLPQWRTISDDAKDLIRKMLTFHP-SLRITATQCLEHPWIQ 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKAFGNLKNGVN--DIKNHKWFAT 299
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 20/286 (6%)
Query: 48 AANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYL 107
++ + ++ + T E + V ++G GS+ V + AVKV++K A
Sbjct: 8 SSGRENLYFQGTFAERYNIVC--MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT 65
Query: 108 KKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK 167
L RE++++K L HPN+++ + +E + YI+ E G L D I + E
Sbjct: 66 STIL-REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 168 KWFRQLVDAIDYCHERGVVHRDIKCENLLIDG---EYNIKLSDFGFARGHMKCKSGHQSP 224
+ +Q+ I Y H+ +VHRD+K EN+L++ + +IK+ DFG + + +
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ-----NTK 179
Query: 225 LSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
+ D G+ Y +PE+L+G DVWS GV+LY + G PF N +LK+V+T
Sbjct: 180 MKDRI-GTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET 236
Query: 285 -KVVF--PTEPNVSAECKTLLSKI--FSPIKFRIRLKDIKQDPWVK 325
K F P +S + K L+ K+ F P RI + PW++
Sbjct: 237 GKYAFDLPQWRTISDDAKDLIRKMLTFHP-SLRITATQCLEHPWIQ 281
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 30/281 (10%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP-----REIDVVKG 120
Y++ K +G G+ VKLA + VA+K++SK + ++ P EI+++K
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
L HP +I+ ++ YI++E E G L D + + E K +F Q++ A+ Y
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 181 HERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYAS 237
HE G++HRD+K EN+L+ + IK++DFG + K ++ L T CG+ Y +
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS------KILGETSLMRTLCGTPTYLA 184
Query: 238 PEILKGVPYTPHYS---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
PE+L V T Y+ D WS+GV+L+ G PF + LK T + P V
Sbjct: 185 PEVLVSVG-TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 295 SAE--------CKTLLSKIFSPIKFRIRLKDIKQDPWVKTE 327
AE K LL + P K R ++ + PW++ E
Sbjct: 244 WAEVSEKALDLVKKLL--VVDP-KARFTTEEALRHPWLQDE 281
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 26/279 (9%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP-----REIDVVKG 120
Y++ K +G G+ VKLA + VA+K++SK + ++ P EI+++K
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
L HP +I+ ++ YI++E E G L D + + E K +F Q++ A+ Y
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 181 HERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYAS 237
HE G++HRD+K EN+L+ + IK++DFG + K ++ L T CG+ Y +
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS------KILGETSLMRTLCGTPTYLA 184
Query: 238 PEILKGVPYTPHYS---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
PE+L V T Y+ D WS+GV+L+ G PF + LK T + P V
Sbjct: 185 PEVLVSVG-TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 295 SAECKT----LLSKIF--SPIKFRIRLKDIKQDPWVKTE 327
AE L+ K+ P K R ++ + PW++ E
Sbjct: 244 WAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 281
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 26/279 (9%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP-----REIDVVKG 120
Y++ K +G G+ VKLA + VA+K++SK + ++ P EI+++K
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
L HP +I+ ++ YI++E E G L D + + E K +F Q++ A+ Y
Sbjct: 78 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 136
Query: 181 HERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYAS 237
HE G++HRD+K EN+L+ + IK++DFG + K ++ L T CG+ Y +
Sbjct: 137 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS------KILGETSLMRTLCGTPTYLA 190
Query: 238 PEILKGVPYTPHYS---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
PE+L V T Y+ D WS+GV+L+ G PF + LK T + P V
Sbjct: 191 PEVLVSVG-TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 249
Query: 295 SAECKT----LLSKIF--SPIKFRIRLKDIKQDPWVKTE 327
AE L+ K+ P K R ++ + PW++ E
Sbjct: 250 WAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 287
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 30/281 (10%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP-----REIDVVKG 120
Y++ K +G G+ VKLA + VA+K++SK + ++ P EI+++K
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
L HP +I+ ++ YI++E E G L D + + E K +F Q++ A+ Y
Sbjct: 72 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 181 HERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYAS 237
HE G++HRD+K EN+L+ + IK++DFG + K ++ L T CG+ Y +
Sbjct: 131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS------KILGETSLMRTLCGTPTYLA 184
Query: 238 PEILKGVPYTPHYS---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
PE+L V T Y+ D WS+GV+L+ G PF + LK T + P V
Sbjct: 185 PEVLVSVG-TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 243
Query: 295 SAE--------CKTLLSKIFSPIKFRIRLKDIKQDPWVKTE 327
AE K LL + P K R ++ + PW++ E
Sbjct: 244 WAEVSEKALDLVKKLL--VVDP-KARFTTEEALRHPWLQDE 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 152
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ T CG+ Y +PEI+ Y
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------TLCGTPEYLAPEIILSKGYNKA 204
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 205 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 261
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 262 DLTKRFGNLKDGVN--DIKNHKWFAT 285
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 26/279 (9%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP-----REIDVVKG 120
Y++ K +G G+ VKLA + VA+K++SK + ++ P EI+++K
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
L HP +I+ ++ YI++E E G L D + + E K +F Q++ A+ Y
Sbjct: 71 LNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYL 129
Query: 181 HERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYAS 237
HE G++HRD+K EN+L+ + IK++DFG + K ++ L T CG+ Y +
Sbjct: 130 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS------KILGETSLMRTLCGTPTYLA 183
Query: 238 PEILKGVPYTPHYS---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
PE+L V T Y+ D WS+GV+L+ G PF + LK T + P V
Sbjct: 184 PEVLVSVG-TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEV 242
Query: 295 SAECKT----LLSKIF--SPIKFRIRLKDIKQDPWVKTE 327
AE L+ K+ P K R ++ + PW++ E
Sbjct: 243 WAEVSEKALDLVKKLLVVDP-KARFTTEEALRHPWLQDE 280
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 131/248 (52%), Gaps = 17/248 (6%)
Query: 66 YVLGKVIGIGSYA---TVKLATSTRHGCDVAVKVVSK---VEAPPDYLKKFLPREIDVVK 119
+ L +V+G G Y V+ T G A+KV+ K V D E ++++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD--TAHTKAERNILE 76
Query: 120 GLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
++HP ++ + A +T ++Y+I+EY G L ++REG E + ++ A+ +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
H++G+++RD+K EN++++ + ++KL+DFG + +S H ++ TFCG+ Y +PE
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----ESIHDGTVTHTFCGTIEYMAPE 191
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAEC 298
IL + D WS+G ++Y M G PF N + + ++ + K+ P P ++ E
Sbjct: 192 ILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP--PYLTQEA 248
Query: 299 KTLLSKIF 306
+ LL K+
Sbjct: 249 RDLLKKLL 256
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 14/221 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
++ +V+G G+++ V L G A+K + K P + L EI V+K ++H N
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK---SPAFRDSSLENEIAVLKKIKHEN 67
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E+T Y++M+ G L D I G E +Q++ A+ Y HE G+
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 186 VHRDIKCENLL-IDGEYN--IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VHRD+K ENLL + E N I ++DFG ++ Q+ + T CG+ Y +PE+L
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSK-------MEQNGIMSTACGTPGYVAPEVLA 180
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
PY+ D WS+GV+ Y + G PF + +L ++++
Sbjct: 181 QKPYSKA-VDCWSIGVITYILLCGYPPFYEETESKLFEKIK 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 29/274 (10%)
Query: 65 GYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVV-KGLRH 123
GYV+ + IG+GSY+ K + AVKV+ K + P EI+++ + +H
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS-------EEIEILLRYGQH 80
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
PN+I + VY++ E G LLD I R+ + E + ++Y H +
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 184 GVVHRDIKCENLL-IDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
GVVHRD+K N+L +D N +++ DFGFA+ ++ ++G L T C + + +PE
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENG----LLMTPCYTANFVAPE 195
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF----DDTNYIQLLKQVQTKVVFPTEPN-- 293
+LK Y D+WS+G++LY M G PF DT ++L ++ + + N
Sbjct: 196 VLKRQGYD-EGCDIWSLGILLYTMLAGYTPFANGPSDTPE-EILTRIGSGKFTLSGGNWN 253
Query: 294 -VSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
VS K L+SK+ P + R+ K + Q PWV
Sbjct: 254 TVSETAKDLVSKMLHVDPHQ-RLTAKQVLQHPWV 286
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKDGVN--DIKNHKWFAT 299
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 239
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 240 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 296
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 297 DLTKRFGNLKNGVN--DIKNHKWFAT 320
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 132/262 (50%), Gaps = 14/262 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHP 124
+ L K++G GS+ V LA + A+K + K V D ++ + + + HP
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
L +T ++ +MEY G L+ IQ D R + +++ + + H +G
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
+V+RD+K +N+L+D + +IK++DFG + +M + ++ FCG+ Y +PEIL G
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-----TNEFCGTPDYIAPEILLGQ 194
Query: 245 PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPN-VSAECKTLLS 303
Y H D WS GV+LY M G+ PF + +L ++ P P + E K LL
Sbjct: 195 KYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLV 251
Query: 304 KIF--SPIKFRIRLK-DIKQDP 322
K+F P K R+ ++ DI+Q P
Sbjct: 252 KLFVREPEK-RLGVRGDIRQHP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 29/274 (10%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
K + M+ Y + KVIG G++ V+L A+K++SK E F E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR--- 171
D++ P +++ A + +Y++MEY G L++ + D P +KW R
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVP--EKWARFYT 179
Query: 172 -QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFA-----RGHMKCKSGHQSPL 225
++V A+D H G +HRD+K +N+L+D ++KL+DFG G ++C
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-------- 231
Query: 226 SDTFCGSYAYASPEILK---GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
DT G+ Y SPE+LK G Y D WS+GV LY M G PF + + ++
Sbjct: 232 -DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
Query: 283 ---QTKVVFPTEPNVSAECKTLLSKIFSPIKFRI 313
+ + FP + ++S E K L+ + + R+
Sbjct: 291 MNHKNSLTFPDDNDISKEAKNLICAFLTDREVRL 324
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKDGVN--DIKNHKWFAT 299
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 29/274 (10%)
Query: 65 GYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVV-KGLRH 123
GYV+ + IG+GSY+ K + AVKV+ K + P EI+++ + +H
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS-------EEIEILLRYGQH 80
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
PN+I + VY++ E G LLD I R+ + E + ++Y H +
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 184 GVVHRDIKCENLL-IDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
GVVHRD+K N+L +D N +++ DFGFA+ ++ ++G L T C + + +PE
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENG----LLMTPCYTANFVAPE 195
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF----DDTNYIQLLKQVQTKVVFPTEPN-- 293
+LK Y D+WS+G++LY M G PF DT ++L ++ + + N
Sbjct: 196 VLKRQGYDEG-CDIWSLGILLYTMLAGYTPFANGPSDTPE-EILTRIGSGKFTLSGGNWN 253
Query: 294 -VSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
VS K L+SK+ P + R+ K + Q PWV
Sbjct: 254 TVSETAKDLVSKMLHVDPHQ-RLTAKQVLQHPWV 286
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 33/326 (10%)
Query: 23 SKENKRPKSSSNKLDLDASSRSTLI----AANKRDVKKKSTVMENHGYVLGKVIGIGSYA 78
K +RP ++++++ L S + + + V K+ E Y++ K +G G+
Sbjct: 107 GKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDE---YIMSKTLGSGACG 163
Query: 79 TVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP-----REIDVVKGLRHPNLIRFLQAI 133
VKLA + VA++++SK + ++ P EI+++K L HP +I+ ++
Sbjct: 164 EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNF 222
Query: 134 ETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCE 193
YI++E E G L D + + E K +F Q++ A+ Y HE G++HRD+K E
Sbjct: 223 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPE 282
Query: 194 NLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
N+L+ + IK++DFG + K ++ L T CG+ Y +PE+L V T Y
Sbjct: 283 NVLLSSQEEDCLIKITDFGHS------KILGETSLMRTLCGTPTYLAPEVLVSVG-TAGY 335
Query: 251 S---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT----LLS 303
+ D WS+GV+L+ G PF + LK T + P V AE L+
Sbjct: 336 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 395
Query: 304 KIF--SPIKFRIRLKDIKQDPWVKTE 327
K+ P K R ++ + PW++ E
Sbjct: 396 KLLVVDP-KARFTTEEALRHPWLQDE 420
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 29/274 (10%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
K + M+ Y + KVIG G++ V+L A+K++SK E F E
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR--- 171
D++ P +++ A + +Y++MEY G L++ + D P +KW R
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVP--EKWARFYT 174
Query: 172 -QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFA-----RGHMKCKSGHQSPL 225
++V A+D H G +HRD+K +N+L+D ++KL+DFG G ++C
Sbjct: 175 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-------- 226
Query: 226 SDTFCGSYAYASPEILK---GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
DT G+ Y SPE+LK G Y D WS+GV LY M G PF + + ++
Sbjct: 227 -DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 285
Query: 283 ---QTKVVFPTEPNVSAECKTLLSKIFSPIKFRI 313
+ + FP + ++S E K L+ + + R+
Sbjct: 286 MNHKNSLTFPDDNDISKEAKNLICAFLTDREVRL 319
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKDGVN--DIKNHKWFAT 299
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 33/326 (10%)
Query: 23 SKENKRPKSSSNKLDLDASSRSTLI----AANKRDVKKKSTVMENHGYVLGKVIGIGSYA 78
K +RP ++++++ L S + + + V K+ E Y++ K +G G+
Sbjct: 93 GKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDE---YIMSKTLGSGACG 149
Query: 79 TVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP-----REIDVVKGLRHPNLIRFLQAI 133
VKLA + VA++++SK + ++ P EI+++K L HP +I+ ++
Sbjct: 150 EVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK-IKNF 208
Query: 134 ETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCE 193
YI++E E G L D + + E K +F Q++ A+ Y HE G++HRD+K E
Sbjct: 209 FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPE 268
Query: 194 NLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
N+L+ + IK++DFG + K ++ L T CG+ Y +PE+L V T Y
Sbjct: 269 NVLLSSQEEDCLIKITDFGHS------KILGETSLMRTLCGTPTYLAPEVLVSVG-TAGY 321
Query: 251 S---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT----LLS 303
+ D WS+GV+L+ G PF + LK T + P V AE L+
Sbjct: 322 NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVK 381
Query: 304 KIF--SPIKFRIRLKDIKQDPWVKTE 327
K+ P K R ++ + PW++ E
Sbjct: 382 KLLVVDP-KARFTTEEALRHPWLQDE 406
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 18/284 (6%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
K + M+ Y + KVIG G++ V+L A+K++SK E F E
Sbjct: 66 KIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE 125
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLV 174
D++ P +++ A + +Y++MEY G L++ + + E K + ++V
Sbjct: 126 RDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVV 184
Query: 175 DAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL--SDTFCGS 232
A+D H G++HRD+K +N+L+D ++KL+DFG C ++ + DT G+
Sbjct: 185 LALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG------TCMKMDETGMVHCDTAVGT 238
Query: 233 YAYASPEILK---GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKV 286
Y SPE+LK G Y D WS+GV L+ M G PF + + ++ + +
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL 298
Query: 287 VFPTEPNVSAECKTLLSKIFSPIKFRI---RLKDIKQDPWVKTE 327
FP + +S K L+ + + R+ +++IKQ P+ K +
Sbjct: 299 CFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 342
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 128 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 239
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 240 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 296
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 297 DLTKRFGNLKNGVN--DIKNHKWFAT 320
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 29/274 (10%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
K + M+ Y + KVIG G++ V+L A+K++SK E F E
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR--- 171
D++ P +++ A + +Y++MEY G L++ + D P +KW R
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVP--EKWARFYT 179
Query: 172 -QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFA-----RGHMKCKSGHQSPL 225
++V A+D H G +HRD+K +N+L+D ++KL+DFG G ++C
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-------- 231
Query: 226 SDTFCGSYAYASPEILK---GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
DT G+ Y SPE+LK G Y D WS+GV LY M G PF + + ++
Sbjct: 232 -DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
Query: 283 ---QTKVVFPTEPNVSAECKTLLSKIFSPIKFRI 313
+ + FP + ++S E K L+ + + R+
Sbjct: 291 MNHKNSLTFPDDNDISKEAKNLICAFLTDREVRL 324
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 34/289 (11%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR-HPNLIR 128
+++G G+YA V+ A S ++G + AVK++ K + + + RE++ + + + N++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAG---HSRSRVFREVETLYQCQGNKNILE 75
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
++ E R Y++ E + GS+L IQ++ + +E + R + A+D+ H +G+ HR
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHR 135
Query: 189 DIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGH---QSPLSDTFCGSYAYASPEILK 242
D+K EN+L + +K+ DF G MK + +P T CGS Y +PE+++
Sbjct: 136 DLKPENILCESPEKVSPVKICDFDLGSG-MKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 243 ----GVPYTPHYSDVWSMGVVLYAMAFGRLPF-----DDTNYI----------QLLKQVQ 283
+ D+WS+GVVLY M G PF D + +L + +Q
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ 254
Query: 284 T-KVVFPTE--PNVSAECKTLLSKIF-SPIKFRIRLKDIKQDPWVKTEA 328
K FP + ++S+E K L+SK+ K R+ + Q PWV+ +A
Sbjct: 255 EGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQA 303
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + IK++DFG A+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 211
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 212 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 268
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 269 DLTKRFGNLKNGVN--DIKNHKWFAT 292
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 161
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 213
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 214 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 270
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 271 DLTKRFGNLKNGVN--DIKNHKWFAT 294
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKDGVN--DIKNHKWFAT 299
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 153
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 205
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 206 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 262
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 263 DLTKRFGNLKNGVN--DIKNHKWFAT 286
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIIISKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 20/265 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTLLSKIFSP 308
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K LL +
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQ- 274
Query: 309 IKFRIRL-------KDIKQDPWVKT 326
+ R DIK W T
Sbjct: 275 VDLTKRFGNLPNGVNDIKNHKWFAT 299
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 99
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 100 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 211
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 212 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 268
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 269 DLTKRFGNLKNGVN--DIKNHKWFAT 292
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
+ +G GS+ V L G A+K++ K + + E + + + P L++
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y+++EYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + IK++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 276
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 277 DLTKRFGNLKNGVN--DIKNHKWFAT 300
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 130/248 (52%), Gaps = 17/248 (6%)
Query: 66 YVLGKVIGIGSYA---TVKLATSTRHGCDVAVKVVSK---VEAPPDYLKKFLPREIDVVK 119
+ L +V+G G Y V+ T G A+KV+ K V D E ++++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD--TAHTKAERNILE 76
Query: 120 GLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
++HP ++ + A +T ++Y+I+EY G L ++REG E + ++ A+ +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
H++G+++RD+K EN++++ + ++KL+DFG + +S H ++ FCG+ Y +PE
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----ESIHDGTVTHXFCGTIEYMAPE 191
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAEC 298
IL + D WS+G ++Y M G PF N + + ++ + K+ P P ++ E
Sbjct: 192 ILMRSGHN-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP--PYLTQEA 248
Query: 299 KTLLSKIF 306
+ LL K+
Sbjct: 249 RDLLKKLL 256
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 134/258 (51%), Gaps = 15/258 (5%)
Query: 54 VKKKSTVMENHGYVLGKVIGIGSYATVKLA---TSTRHGCDVAVKVVSKVEAP-PDYLKK 109
VK S + + L KV+G GS+ V L T G A+KV+ K D ++
Sbjct: 18 VKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT 77
Query: 110 FLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKW 169
+ R D++ + HP +++ A +T ++Y+I+++ G L + +E E K +
Sbjct: 78 KMER--DILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 135
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF 229
+L +D+ H G+++RD+K EN+L+D E +IKL+DFG ++ + + S F
Sbjct: 136 LAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-----F 190
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVF 288
CG+ Y +PE++ ++ H +D WS GV+++ M G LPF + + + + + K+
Sbjct: 191 CGTVEYMAPEVVNRQGHS-HSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGM 249
Query: 289 PTEPNVSAECKTLLSKIF 306
P +S E ++LL +F
Sbjct: 250 PQ--FLSTEAQSLLRALF 265
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVE--APPDYLKKFLPREIDVVKGLRHPNLIRF 129
IG GSY + R D + V +++ + + K+ L E+++++ L+HPN++R+
Sbjct: 14 IGTGSYGRCQ---KIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 130 LQAI--ETTHRVYIIMEYAEKGSLLDFIQR----EGYIDEPRTKKWFRQLVDAIDYCHER 183
I T +YI+MEY E G L I + Y+DE + QL A+ CH R
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 184 G-----VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
V+HRD+K N+ +DG+ N+KL DFG AR H + + TF G+ Y SP
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-----ILNHDTSFAKTFVGTPYYMSP 185
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
E + + Y SD+WS+G +LY + PF
Sbjct: 186 EQMNRMSYNEK-SDIWSLGCLLYELCALMPPF 216
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEYA G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENL+ID + I+++DFG A+ +K ++ CG+ Y +PEI+ Y
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 24/252 (9%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKV--VSKVEAPPDYLKKFLP---REIDVVKGLR-HP 124
VIG G + V+ G + AVK+ V+ P+ L++ RE +++ + HP
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
++I + + E++ ++++ + KG L D++ + + E T+ R L++A+ + H
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSD--TFCGSYAYASPEILK 242
+VHRD+K EN+L+D I+LSDFGF S H P CG+ Y +PEILK
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGF--------SCHLEPGEKLRELCGTPGYLAPEILK 272
Query: 243 GV--PYTPHYS---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTEPNV 294
P Y D+W+ GV+L+ + G PF I +L+ + Q + P +
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 295 SAECKTLLSKIF 306
S+ K L+S++
Sbjct: 333 SSTVKDLISRLL 344
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 122/237 (51%), Gaps = 12/237 (5%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +PEI+ Y
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPEIILSKGYNKA 219
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTLLSKI 305
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K LL +
Sbjct: 220 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNL 273
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ Y +P I+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEYLAPAIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 124/254 (48%), Gaps = 23/254 (9%)
Query: 63 NHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPR---EIDVVK 119
N Y L IG GS+ VK+A A K + P Y + + R EI+++K
Sbjct: 25 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI------PKYFVEDVDRFKQEIEIMK 78
Query: 120 GLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
L HPN+IR + E +Y++ME G L + + + E + + ++ A+ Y
Sbjct: 79 SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 180 CHERGVVHRDIKCENLLI---DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYA 236
CH+ V HRD+K EN L + +KL DFG A + K G + T G+ Y
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGK---MMRTKVGTPYYV 192
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFD-DTNYIQLLKQVQTKVVFPTEP--N 293
SP++L+G+ Y P D WS GV++Y + G PF T+ +LK + FP + N
Sbjct: 193 SPQVLEGL-YGPE-CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 250
Query: 294 VSAECKTLLSKIFS 307
VS + ++L+ ++ +
Sbjct: 251 VSPQAESLIRRLLT 264
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 124/254 (48%), Gaps = 23/254 (9%)
Query: 63 NHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPR---EIDVVK 119
N Y L IG GS+ VK+A A K + P Y + + R EI+++K
Sbjct: 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKI------PKYFVEDVDRFKQEIEIMK 61
Query: 120 GLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
L HPN+IR + E +Y++ME G L + + + E + + ++ A+ Y
Sbjct: 62 SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 180 CHERGVVHRDIKCENLLI---DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYA 236
CH+ V HRD+K EN L + +KL DFG A + K G + T G+ Y
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA---ARFKPGK---MMRTKVGTPYYV 175
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFD-DTNYIQLLKQVQTKVVFPTEP--N 293
SP++L+G+ Y P D WS GV++Y + G PF T+ +LK + FP + N
Sbjct: 176 SPQVLEGL-YGPE-CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 233
Query: 294 VSAECKTLLSKIFS 307
VS + ++L+ ++ +
Sbjct: 234 VSPQAESLIRRLLT 247
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 125/240 (52%), Gaps = 14/240 (5%)
Query: 71 VIGIGSYATVKLATSTRHGCD--VAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
V+G GS+ V LA R G + A+K++ K D + E V+ L P +
Sbjct: 26 VLGKGSFGKVMLAD--RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 129 FLQA-IETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVH 187
L + +T R+Y +MEY G L+ IQ+ G EP+ + ++ + + H+RG+++
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIY 143
Query: 188 RDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYT 247
RD+K +N+++D E +IK++DFG + HM + FCG+ Y +PEI+ PY
Sbjct: 144 RDLKLDNVMLDSEGHIKIADFGMCKEHMM-----DGVTTREFCGTPDYIAPEIIAYQPYG 198
Query: 248 PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAE--CKTLLSK 304
D W+ GV+LY M G+ PFD + +L + + + V +P + A CK L++K
Sbjct: 199 KS-VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTK 257
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 137/268 (51%), Gaps = 18/268 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y L + +G G+++ V+ + A K++ +K + D+ K L RE + + L+HP
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQK--LEREARICRLLKHP 90
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
N++R +I Y++ + G L + I Y E Q+++++++ H+
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 185 VVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+VHRD+K ENLL+ + +KL+DFG A ++ + Q+ F G+ Y SPE+L
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGEQQAWFG--FAGTPGYLSPEVL 205
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV-FPTEP--NVSAEC 298
+ PY D+W+ GV+LY + G PF D + +L +Q++ FP+ V+ E
Sbjct: 206 RKDPYGKPV-DIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 264
Query: 299 KTLLSKIFS--PIKFRIRLKDIKQDPWV 324
K L++++ + P K RI + PWV
Sbjct: 265 KNLINQMLTINPAK-RITADQALKHPWV 291
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 17/247 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDV----AVKVVSKVEAP-PDYLKKFLPREIDVVKG 120
+ L KV+G GS+ V L G D A+KV+ K D ++ + R D++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKIS-GSDARQLYAMKVLKKATLKVRDRVRTKMER--DILVE 82
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
+ HP +++ A +T ++Y+I+++ G L + +E E K + +L A+D+
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H G+++RD+K EN+L+D E +IKL+DFG ++ +S + +FCG+ Y +PE+
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-----ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECK 299
+ +T +D WS GV+++ M G LPF + + + + + K+ P +S E +
Sbjct: 198 VNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ--FLSPEAQ 254
Query: 300 TLLSKIF 306
+LL +F
Sbjct: 255 SLLRMLF 261
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 17/247 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDV----AVKVVSKVEAP-PDYLKKFLPREIDVVKG 120
+ L KV+G GS+ V L G D A+KV+ K D ++ + R D++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKIS-GSDARQLYAMKVLKKATLKVRDRVRTKMER--DILVE 82
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
+ HP +++ A +T ++Y+I+++ G L + +E E K + +L A+D+
Sbjct: 83 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H G+++RD+K EN+L+D E +IKL+DFG ++ +S + +FCG+ Y +PE+
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-----ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECK 299
+ +T +D WS GV+++ M G LPF + + + + + K+ P +S E +
Sbjct: 198 VNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ--FLSPEAQ 254
Query: 300 TLLSKIF 306
+LL +F
Sbjct: 255 SLLRMLF 261
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 17/247 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDV----AVKVVSKVEAP-PDYLKKFLPREIDVVKG 120
+ L KV+G GS+ V L G D A+KV+ K D ++ + R D++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKIS-GSDARQLYAMKVLKKATLKVRDRVRTKMER--DILVE 83
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
+ HP +++ A +T ++Y+I+++ G L + +E E K + +L A+D+
Sbjct: 84 VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H G+++RD+K EN+L+D E +IKL+DFG ++ +S + +FCG+ Y +PE+
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-----ESIDHEKKAYSFCGTVEYMAPEV 198
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTEPNVSAECK 299
+ +T +D WS GV+++ M G LPF + + + + + K+ P +S E +
Sbjct: 199 VNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ--FLSPEAQ 255
Query: 300 TLLSKIF 306
+LL +F
Sbjct: 256 SLLRMLF 262
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 140/275 (50%), Gaps = 24/275 (8%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV--SKVEAPPDYLKKFLPREIDVVKGLRH 123
Y L +VIG G+++ V+ + G AVK+V +K + P + L RE + L+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSL-LDFIQRE--GYI-DEPRTKKWFRQLVDAIDY 179
P+++ L+ + +Y++ E+ + L + ++R G++ E + RQ+++A+ Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 180 CHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYA 236
CH+ ++HRD+K EN+L+ + N +KL DFG A + G ++ G+ +
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-----IQLGESGLVAGGRVGTPHFM 200
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP---- 292
+PE++K PY DVW GV+L+ + G LPF T + L + K + P
Sbjct: 201 APEVVKREPYGKPV-DVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWS 257
Query: 293 NVSAECKTLLSK--IFSPIKFRIRLKDIKQDPWVK 325
++S K L+ + + P + RI + + PW+K
Sbjct: 258 HISESAKDLVRRMLMLDPAE-RITVYEALNHPWLK 291
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ CG+ +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLCGTPEALAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ G+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLAGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 107/212 (50%), Gaps = 22/212 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVE--APPDYLKKFLPREIDVVKGLRHPNLIRF 129
IG GSY + R D + V +++ + + K+ L E+++++ L+HPN++R+
Sbjct: 14 IGTGSYGRCQ---KIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 130 LQAI--ETTHRVYIIMEYAEKGSLLDFIQR----EGYIDEPRTKKWFRQLVDAIDYCHER 183
I T +YI+MEY E G L I + Y+DE + QL A+ CH R
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 184 G-----VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
V+HRD+K N+ +DG+ N+KL DFG AR H + + F G+ Y SP
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-----ILNHDTSFAKAFVGTPYYMSP 185
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
E + + Y SD+WS+G +LY + PF
Sbjct: 186 EQMNRMSYNEK-SDIWSLGCLLYELCALMPPF 216
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G GS+ V L G A+K++ K + + E +++ + P L++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + +Y++MEY G + ++R G EP + + Q+V +Y H +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K ENLLID + I+++DFGFA+ +K ++ G+ Y +PEI+ Y
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-RVKGRTW-------XLXGTPEYLAPEIILSKGYNKA 218
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ-VQTKVVFPTEPNVSAECKTL------- 301
D W++GV++Y MA G PF IQ+ ++ V KV FP+ + S++ K L
Sbjct: 219 -VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQV 275
Query: 302 -LSKIFSPIKFRIRLKDIKQDPWVKT 326
L+K F +K + DIK W T
Sbjct: 276 DLTKRFGNLKNGVN--DIKNHKWFAT 299
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y+ G+ +G G +A T A KVV K + K+ + EI + K L +P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ F E VY+++E + SLL+ +R + EP + + RQ + + Y H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL--KG 243
+HRD+K NL ++ + ++K+ DFG A K T CG+ Y +PE+L KG
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQ 281
+ D+WS+G +LY + G+ PF+ + YI++ K
Sbjct: 219 HSFE---VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L DF+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K ENLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVE--APPDYLKKFLPREIDVVKGLRHPNLIRF 129
IG GSY + R D + V +++ + + K+ L E+++++ L+HPN++R+
Sbjct: 14 IGTGSYGRCQ---KIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70
Query: 130 LQAI--ETTHRVYIIMEYAEKGSLLDFIQR----EGYIDEPRTKKWFRQLVDAIDYCHER 183
I T +YI+MEY E G L I + Y+DE + QL A+ CH R
Sbjct: 71 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 184 G-----VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
V+HRD+K N+ +DG+ N+KL DFG AR H + F G+ Y SP
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR-----ILNHDEDFAKEFVGTPYYMSP 185
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
E + + Y SD+WS+G +LY + PF
Sbjct: 186 EQMNRMSYNEK-SDIWSLGCLLYELCALMPPF 216
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y LG+++G G + V LA R DVAVKV+ + + P + +F RE L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 125 NLIRFLQAIETTHRV----YIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
++ E YI+MEY + +L D + EG + R + A+++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H+ G++HRD+K N+LI +K+ DFG AR SG+ + G+ Y SPE
Sbjct: 133 HQNGIIHRDVKPANILISATNAVKVVDFGIARA--IADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ 281
+G SDV+S+G VLY + G PF + + + Q
Sbjct: 191 ARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 16/241 (6%)
Query: 71 VIGIGSYATVKLATSTRHGCD--VAVKVVSK--VEAPPDYLKKFLPREIDVVKGLRHPNL 126
V+G GS+ V L S R G D AVK++ K V D + + + + G + P L
Sbjct: 348 VLGKGSFGKVML--SERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFL 404
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
+ +T R+Y +MEY G L+ IQ+ G EP + ++ + + +G++
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGII 464
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
+RD+K +N+++D E +IK++DFG + ++ + FCG+ Y +PEI+ PY
Sbjct: 465 YRDLKLDNVMLDSEGHIKIADFGMCKENI-----WDGVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFP--TEPNVSAECKTLLS 303
D W+ GV+LY M G+ PF+ + +L + + + V +P A CK L++
Sbjct: 520 GKSV-DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 578
Query: 304 K 304
K
Sbjct: 579 K 579
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y LG+++G G + V LA R DVAVKV+ + + P + +F RE L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 125 NLIRFLQAIETTHRV----YIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
++ E YI+MEY + +L D + EG + R + A+++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H+ G++HRD+K N++I +K+ DFG AR SG+ + G+ Y SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ 281
+G SDV+S+G VLY + G PF + + + Q
Sbjct: 191 ARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G+Y V L G + A+K++ K L E+ V+K L HPN+++
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ E Y++ME G L D I E +Q++ Y H+ +VHRD
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 129
Query: 190 IKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
+K ENLL++ + IK+ DFG + H + + L G+ Y +PE+L+
Sbjct: 130 LKPENLLLESKSRDALIKIVDFGLS-AHFEVGGKMKERL-----GTAYYIAPEVLR--KK 181
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT-KVVF--PTEPNVSAECKTL-- 301
DVWS GV+LY + G PF ++LK+V+ K F P VS E K L
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 302 LSKIFSPIKFRIRLKDIKQDPWV 324
L + P K RI ++ PW+
Sbjct: 242 LMLTYEPSK-RISAEEALNHPWI 263
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 25/275 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDY-------LKKF---LPREIDVVKGL 121
+G G+Y V L + A+KV+ K + ++KF + EI ++K L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
HPN+I+ E Y++ E+ E G L + I DE +Q++ I Y H
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 182 ERGVVHRDIKCENLLIDGE---YNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ +VHRDIK EN+L++ + NIK+ DFG + K L D G+ Y +P
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-----DYKLRDRL-GTAYYIAP 217
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK---VVFPTEPNVS 295
E+LK Y DVWS GV++Y + G PF N ++K+V+ F N+S
Sbjct: 218 EVLKK-KYNEK-CDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNIS 275
Query: 296 AECKTLLSKIFS-PIKFRIRLKDIKQDPWVKTEAN 329
E K L+ + + R ++ W+K AN
Sbjct: 276 DEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 16/241 (6%)
Query: 71 VIGIGSYATVKLATSTRHGCD--VAVKVVSK--VEAPPDYLKKFLPREIDVVKGLRHPNL 126
V+G GS+ V L S R G D AVK++ K V D + + + + G + P L
Sbjct: 27 VLGKGSFGKVML--SERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFL 83
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
+ +T R+Y +MEY G L+ IQ+ G EP + ++ + + +G++
Sbjct: 84 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGII 143
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
+RD+K +N+++D E +IK++DFG + ++ + FCG+ Y +PEI+ PY
Sbjct: 144 YRDLKLDNVMLDSEGHIKIADFGMCKENI-----WDGVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFP--TEPNVSAECKTLLS 303
D W+ GV+LY M G+ PF+ + +L + + + V +P A CK L++
Sbjct: 199 GKS-VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMT 257
Query: 304 K 304
K
Sbjct: 258 K 258
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y LG+++G G + V LA R DVAVKV+ + + P + +F RE L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 125 NLIRFLQAIETTHRV----YIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
++ E YI+MEY + +L D + EG + R + A+++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H+ G++HRD+K N++I +K+ DFG AR SG+ + G+ Y SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+G SDV+S+G VLY + G PF
Sbjct: 191 ARGDSVDAR-SDVYSLGCVLYEVLTGEPPF 219
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y+ G+ +G G +A T A KVV K + K+ + EI + K L +P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ F E VY+++E + SLL+ +R + EP + + RQ + + Y H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL--KG 243
+HRD+K NL ++ + ++K+ DFG A K CG+ Y +PE+L KG
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQ 281
+ D+WS+G +LY + G+ PF+ + YI++ K
Sbjct: 219 HSFE---VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y+ G+ +G G +A T A KVV K + K+ + EI + K L +P+
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ F E VY+++E + SLL+ +R + EP + + RQ + + Y H V
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL--KG 243
+HRD+K NL ++ + ++K+ DFG A K CG+ Y +PE+L KG
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQ 281
+ D+WS+G +LY + G+ PF+ + YI++ K
Sbjct: 219 HSFE---VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 4 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 60
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ L DF+ I P K + QL+ +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 174
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPL 258
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y LG+++G G + V LA R DVAVKV+ + + P + +F RE L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 125 NLIRFLQAIETTHRV----YIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
++ E YI+MEY + +L D + EG + R + A+++
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H+ G++HRD+K N++I +K+ DFG AR SG+ + G+ Y SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ 281
+G SDV+S+G VLY + G PF + + + Q
Sbjct: 191 ARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y LG+++G G + V LA R DVAVKV+ + + P + +F RE L HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 72
Query: 125 NLIRFLQAIETTHRV----YIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
++ E YI+MEY + +L D + EG + R + A+++
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H+ G++HRD+K N++I +K+ DFG AR SG+ + G+ Y SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ 281
+G SDV+S+G VLY + G PF + + + Q
Sbjct: 191 ARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 5 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 61
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ L DF+ I P K + QL+ +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPL 259
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 17/279 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G+Y V L + A+K++ K K L E+ V+K L HPN+++
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL-EEVAVLKLLDHPNIMKL 101
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
E Y++ME + G L D I +E +Q++ + Y H+ +VHRD
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 190 IKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
+K ENLL++ + IK+ DFG + +Q + + +Y Y +PE+L+
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLS-----AVFENQKKMKERLGTAY-YIAPEVLR--KK 213
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT-KVVF--PTEPNVSAECKTLLS 303
DVWS+GV+L+ + G PF ++L++V+ K F P NVS K L+
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK 273
Query: 304 KIFS-PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTL 341
++ + RI + + PW+K E +G+E +L
Sbjct: 274 QMLQFDSQRRISAQQALEHPWIK-EMCSKKESGIELPSL 311
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 146/304 (48%), Gaps = 48/304 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 65
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 172
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVF 227
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN--Q 343
F VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 228 F--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGP 284
Query: 344 SKID 347
SK+D
Sbjct: 285 SKVD 288
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y+ G+ +G G +A T A KVV K + K+ + EI + K L +P+
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ F E VY+++E + SLL+ +R + EP + + RQ + + Y H V
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 147
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL--KG 243
+HRD+K NL ++ + ++K+ DFG A K CG+ Y +PE+L KG
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA-----TKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDT----NYIQLLKQ 281
+ D+WS+G +LY + G+ PF+ + YI++ K
Sbjct: 203 HSFE---VDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 57 KSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREID 116
++++ GY + + IG+GSY+ K + AVK++ K + P EI+
Sbjct: 15 RNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT-------EEIE 67
Query: 117 VV-KGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ + +HPN+I + VY++ E + G LLD I R+ + E +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITK 127
Query: 176 AIDYCHERGVVHRDIKCENLL-IDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCG 231
++Y H +GVVHRD+K N+L +D N I++ DFGFA+ ++ ++G L T C
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENG----LLMTPCY 182
Query: 232 SYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF----DDT 273
+ + +PE+L+ Y D+WS+GV+LY M G PF DDT
Sbjct: 183 TANFVAPEVLERQGYDAA-CDIWSLGVLLYTMLTGYTPFANGPDDT 227
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 44/302 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 64
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVL 124
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 173
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V F
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVFF- 227
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN--QSK 345
VS+EC+ L+ + P R ++I+ PW++ P +A + +L+ SK
Sbjct: 228 -RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPSK 285
Query: 346 ID 347
+D
Sbjct: 286 VD 287
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 44/302 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 64
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 124
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 173
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V F
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVFF- 227
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN--QSK 345
VS+EC+ L+ + P R ++I+ PW++ P +A + +L+ SK
Sbjct: 228 -RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPSK 285
Query: 346 ID 347
+D
Sbjct: 286 VD 287
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 121/263 (46%), Gaps = 17/263 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G+Y V L G + A+K++ K L E+ V+K L HPN+++
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ E Y++ME G L D I E +Q++ Y H+ +VHRD
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 146
Query: 190 IKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
+K ENLL++ + IK+ DFG + H + + L G+ Y +PE+L+
Sbjct: 147 LKPENLLLESKSRDALIKIVDFGLS-AHFEVGGKMKERL-----GTAYYIAPEVLR--KK 198
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT-KVVF--PTEPNVSAECKTL-- 301
DVWS GV+LY + G PF ++LK+V+ K F P VS E K L
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 258
Query: 302 LSKIFSPIKFRIRLKDIKQDPWV 324
L + P K RI ++ PW+
Sbjct: 259 LMLTYEPSK-RISAEEALNHPWI 280
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 18/232 (7%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
D KKK T E IG G+ TV A G +VA++ ++ + P K+ +
Sbjct: 17 DPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELII 65
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
EI V++ ++PN++ +L + ++++MEY GSL D + E +DE + R+
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRE 124
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
+ A+++ H V+HRDIK +N+L+ + ++KL+DFGF + + +S T G+
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRS----TMVGT 179
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
+ +PE++ Y P D+WS+G++ M G P+ + N ++ L + T
Sbjct: 180 PYWMAPEVVTRKAYGPKV-DIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT 230
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 4 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 60
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K ENLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 174
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPL 258
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 3 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 59
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K ENLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 173
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPL 257
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 107
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 167
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 168 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 214
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVF 269
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
F VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 270 F--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 323
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 144/282 (51%), Gaps = 26/282 (9%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP--PDYLKKFLPREIDVVKGLRH 123
Y++G ++G GSY VK + C AVK++ K + P+ + + +EI +++ LRH
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNG-EANVKKEIQLLRRLRH 65
Query: 124 PNLIRFLQAI--ETTHRVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
N+I+ + + E ++Y++MEY G +LD + E + +F QL+D ++Y
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEY 124
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFC----GSYAY 235
H +G+VH+DIK NLL+ +K+S G A ++ H DT C GS A+
Sbjct: 125 LHSQGIVHKDIKPGNLLLTTGGTLKISALGVA------EALHPFAADDT-CRTSQGSPAF 177
Query: 236 ASPEILKGV-PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTE-- 291
PEI G+ ++ D+WS GV LY + G PF+ N +L + + + P +
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCG 237
Query: 292 PNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKTEANPAAS 333
P +S K +L + P K R ++ I+Q W + + PA +
Sbjct: 238 PPLSDLLKGMLE--YEPAK-RFSIRQIRQHSWFRKKHPPAEA 276
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 28 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 83
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 84 LFM-GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDS 199
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q+++ V + P V + C +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 304 KIFS 307
++ +
Sbjct: 260 RLMA 263
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 9/221 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y LG+++G G + V LA R DVAVKV+ + + P + +F RE L HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-REAQNAAALNHP 89
Query: 125 NLIRFLQAIETTHRV----YIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
++ E YI+MEY + +L D + EG + R + A+++
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 149
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H+ G++HRD+K N++I +K+ DFG AR SG+ + G+ Y SPE
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDFGIARA--IADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQ 281
+G SDV+S+G VLY + G PF + + + Q
Sbjct: 208 ARGDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 247
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 79
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 139
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 140 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 188
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V F
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVFF- 242
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 243 -RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 295
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 65
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 172
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVF 227
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
F VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 228 F--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 281
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 92
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 201
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V F
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVFF- 255
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 256 -RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 308
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 65
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 125
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 126 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 172
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVF 227
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
F VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 228 F--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 281
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 148/314 (47%), Gaps = 43/314 (13%)
Query: 47 IAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDY 106
+ A K K+ +E+ Y +G ++G G + +V VA+K V K D
Sbjct: 8 LHATKLAPGKEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DR 61
Query: 107 LKKF--------LPREIDVVKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFI 155
+ + +P E+ ++K + +IR L E +I+E E L DFI
Sbjct: 62 ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI 121
Query: 156 QREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGH 214
G + E + +F Q+++A+ +CH GV+HRDIK EN+LID +KL DFG
Sbjct: 122 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----- 176
Query: 215 MKCKSGHQSPLSDT----FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
SG + L DT F G+ Y+ PE ++ Y + VWS+G++LY M G +PF
Sbjct: 177 ----SG--ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 271 DDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEA 328
+ I ++ +V F VS+EC+ L+ + P R ++I+ PW++
Sbjct: 231 EHDEEI-----IRGQVFF--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVL 282
Query: 329 NPAASAGVETKTLN 342
P +A + +L+
Sbjct: 283 LPQETAEIHLHSLS 296
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 148/314 (47%), Gaps = 43/314 (13%)
Query: 47 IAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDY 106
+ A K K+ +E+ Y +G ++G G + +V VA+K V K D
Sbjct: 27 LHATKLAPGKEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DR 80
Query: 107 LKKF--------LPREIDVVKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFI 155
+ + +P E+ ++K + +IR L E +I+E E L DFI
Sbjct: 81 ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI 140
Query: 156 QREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGH 214
G + E + +F Q+++A+ +CH GV+HRDIK EN+LID +KL DFG
Sbjct: 141 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----- 195
Query: 215 MKCKSGHQSPLSDT----FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
SG + L DT F G+ Y+ PE ++ Y + VWS+G++LY M G +PF
Sbjct: 196 ----SG--ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
Query: 271 DDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEA 328
+ I ++ +V F VS+EC+ L+ + P R ++I+ PW++
Sbjct: 250 EHDEEI-----IRGQVFF--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVL 301
Query: 329 NPAASAGVETKTLN 342
P +A + +L+
Sbjct: 302 LPQETAEIHLHSLS 315
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 147/314 (46%), Gaps = 43/314 (13%)
Query: 47 IAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDY 106
+ A K K+ +E+ Y +G ++G G + +V VA+K V K D
Sbjct: 8 LHATKLAPGKEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DR 61
Query: 107 LKKF--------LPREIDVVKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFI 155
+ + +P E+ ++K + +IR L E +I+E E L DFI
Sbjct: 62 ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI 121
Query: 156 QREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGH 214
G + E + +F Q+++A+ +CH GV+HRDIK EN+LID +KL DFG
Sbjct: 122 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----- 176
Query: 215 MKCKSGHQSPLSDT----FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
SG + L DT F G+ Y+ PE ++ Y + VWS+G++LY M G +PF
Sbjct: 177 ----SG--ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 271 DDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEA 328
+ I ++ +V F VS EC+ L+ + P R ++I+ PW++
Sbjct: 231 EHDEEI-----IRGQVFF--RQRVSXECQHLIRWCLALRPXD-RPTFEEIQNHPWMQDVL 282
Query: 329 NPAASAGVETKTLN 342
P +A + +L+
Sbjct: 283 LPQETAEIHLHSLS 296
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 28 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 83
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 84 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDS 199
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q+++ V + P V + C +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 304 KIFS 307
++ +
Sbjct: 260 RLMA 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 58 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 112
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 113 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 172
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 173 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 221
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V F
Sbjct: 222 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVFF- 275
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 276 -RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 328
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 3 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 59
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEY--AEKGSLLDFIQREGYIDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + +D G I P K + QL+ +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLA 118
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K ENLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 173
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPL 257
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 5 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 61
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + + +D G I P K + QL+ +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLA 120
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPL 259
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 5 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 61
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEY--AEKGSLLDFIQREGYIDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + +D G I P K + QL+ +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLA 120
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K ENLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPL 259
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 5 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 61
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ ++ L F+ I P K + QL+ +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPL 259
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 93
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 202
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I + +V F
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IGGQVFF- 256
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 257 -RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 309
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLS 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 107
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 167
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 168 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 216
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V F
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVFF- 270
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 271 -RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 323
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 129/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 1 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 57
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + + +D G I P K + QL+ +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG-IPLPLIKSYLFQLLQGLA 116
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 171
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPL 255
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 147/314 (46%), Gaps = 43/314 (13%)
Query: 47 IAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDY 106
+ A K K+ +E+ Y +G ++G G + +V VA+K V K D
Sbjct: 8 LHATKLAPGKEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DR 61
Query: 107 LKKF--------LPREIDVVKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFI 155
+ + +P E+ ++K + +IR L E +I+E E L DFI
Sbjct: 62 ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI 121
Query: 156 QREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGH 214
G + E + +F Q+++A+ +CH GV+HRDIK EN+LID +KL DFG
Sbjct: 122 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----- 176
Query: 215 MKCKSGHQSPLSDT----FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
SG + L DT F G+ Y+ PE ++ Y + VWS+G++LY M G +PF
Sbjct: 177 ----SG--ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 271 DDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEA 328
+ I ++ +V F VS EC+ L+ + P R ++I+ PW++
Sbjct: 231 EHDEEI-----IRGQVFF--RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVL 282
Query: 329 NPAASAGVETKTLN 342
P +A + +L+
Sbjct: 283 LPQETAEIHLHSLS 296
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 16 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 71
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 72 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 130
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDS 187
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q+++ V + P V + C +
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 247
Query: 304 KIFS 307
++ +
Sbjct: 248 RLMA 251
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 147/314 (46%), Gaps = 43/314 (13%)
Query: 47 IAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDY 106
+ A K K+ +E+ Y +G ++G G + +V VA+K V K D
Sbjct: 7 LHATKLAPGKEKEPLESQ-YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DR 60
Query: 107 LKKF--------LPREIDVVKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFI 155
+ + +P E+ ++K + +IR L E +I+E E L DFI
Sbjct: 61 ISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI 120
Query: 156 QREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGH 214
G + E + +F Q+++A+ +CH GV+HRDIK EN+LID +KL DFG
Sbjct: 121 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----- 175
Query: 215 MKCKSGHQSPLSDT----FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
SG + L DT F G+ Y+ PE ++ Y + VWS+G++LY M G +PF
Sbjct: 176 ----SG--ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 271 DDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEA 328
+ I ++ +V F VS EC+ L+ + P R ++I+ PW++
Sbjct: 230 EHDEEI-----IRGQVFF--RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVL 281
Query: 329 NPAASAGVETKTLN 342
P +A + +L+
Sbjct: 282 LPQETAEIHLHSLS 295
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 46/297 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 93
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 200
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I + +V
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IGGQVF 255
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
F VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 256 F--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 309
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 92
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 201
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I + +V F
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IGGQVFF- 255
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 256 -RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 308
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 3 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 59
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 173
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPL 257
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 122/234 (52%), Gaps = 22/234 (9%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
D KKK T E IG G+ TV A G +VA++ ++ + P K+ +
Sbjct: 17 DPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELII 65
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
EI V++ ++PN++ +L + ++++MEY GSL D + E +DE + R+
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRE 124
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCK--SGHQSPLSDTFC 230
+ A+++ H V+HRDIK +N+L+ + ++KL+DFGF C + QS S+
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF------CAQITPEQSKRSE-MV 177
Query: 231 GSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
G+ + +PE++ Y P D+WS+G++ M G P+ + N ++ L + T
Sbjct: 178 GTPYWMAPEVVTRKAYGPKV-DIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT 230
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 4 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 60
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 174
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPL 258
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 46/297 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 87
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 88 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 147
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 148 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 194
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVF 249
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
F VS EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 250 F--RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 303
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 92
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 201
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I + +V F
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IGGQVFF- 255
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS+EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 256 -RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 308
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 3 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 59
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 173
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPL 257
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 1 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 57
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 171
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPL 255
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 5 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 61
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPL 259
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 4 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 60
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 174
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPL 258
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 5 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 61
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 175
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPL 259
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 6 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 62
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 176
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPL 260
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 6 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 62
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 176
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPL 260
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 9 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 65
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 179
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPL 263
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 58
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 172
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 1 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 57
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 171
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPL 255
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 1 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 57
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 58 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 171
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPL 255
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 115/226 (50%), Gaps = 22/226 (9%)
Query: 57 KSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREID 116
++++ GY + + IG+GSY+ K + AVK++ K + P EI+
Sbjct: 15 RNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPT-------EEIE 67
Query: 117 VV-KGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++ + +HPN+I + VY++ E + G LLD I R+ + E +
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITK 127
Query: 176 AIDYCHERGVVHRDIKCENLL-IDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCG 231
++Y H +GVVHRD+K N+L +D N I++ DFGFA+ ++ ++G L T C
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENG----LLXTPCY 182
Query: 232 SYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF----DDT 273
+ + +PE+L+ Y D+WS+GV+LY G PF DDT
Sbjct: 183 TANFVAPEVLERQGYDAA-CDIWSLGVLLYTXLTGYTPFANGPDDT 227
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 9 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 65
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 66 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAP 179
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPL 263
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 24/264 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
MEN V + IG G+Y V A + G VA+K + +++ + + REI ++K
Sbjct: 3 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKE 59
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAID 178
L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+ +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y +P
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW-----YRAP 173
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-- 290
EIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 291 -----EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPL 257
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 92
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 201
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I + +V F
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IGGQVFF- 255
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 256 -RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 308
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 22/253 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G+Y V A + G VA+K + +++ + + REI ++K L HPN+++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
I T +++Y++ E+ + L F+ I P K + QL+ + +CH V+HRD
Sbjct: 69 VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+K +NLLI+ E IKL+DFG AR + + + Y +PEIL G Y
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----YRAPEILLGCKYYST 182
Query: 250 YSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFPT-------EPNVSA 296
D+WS+G + M R F D+ QL + +T +VV+P +P+
Sbjct: 183 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242
Query: 297 ECKTLLSKIFSPI 309
+ SK+ P+
Sbjct: 243 WARQDFSKVVPPL 255
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 93
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 202
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I + +V F
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IGGQVFF- 256
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 257 -RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 309
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 122/234 (52%), Gaps = 22/234 (9%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
D KKK T E IG G+ TV A G +VA++ ++ + P K+ +
Sbjct: 18 DPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELII 66
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
EI V++ ++PN++ +L + ++++MEY GSL D + E +DE + R+
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRE 125
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCK--SGHQSPLSDTFC 230
+ A+++ H V+HR+IK +N+L+ + ++KL+DFGF C + QS S T
Sbjct: 126 CLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGF------CAQITPEQSKRS-TMV 178
Query: 231 GSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
G+ + +PE++ Y P D+WS+G++ M G P+ + N ++ L + T
Sbjct: 179 GTPYWMAPEVVTRKAYGPKV-DIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT 231
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 42/295 (14%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 93
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 175 DAIDYCHERGVVHRDIKCENLLID-GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----F 229
+A+ +CH GV+HRDIK EN+LID +KL DFG SG + L DT F
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG---------SG--ALLKDTVYTDF 202
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I + +V F
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IGGQVFF- 256
Query: 290 TEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
VS EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 257 -RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 309
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
D KKK T E IG G+ TV A G +VA++ ++ + P K+ +
Sbjct: 18 DPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELII 66
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
EI V++ ++PN++ +L + ++++MEY GSL D + E +DE + R+
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRE 125
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCK--SGHQSPLSDTFC 230
+ A+++ H V+HRDIK +N+L+ + ++KL+DFGF C + QS S
Sbjct: 126 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF------CAQITPEQSKRS-XMV 178
Query: 231 GSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
G+ + +PE++ Y P D+WS+G++ M G P+ + N ++ L + T
Sbjct: 179 GTPYWMAPEVVTRKAYGPKV-DIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT 231
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 102/184 (55%), Gaps = 12/184 (6%)
Query: 107 LKKFLPREIDVVKGLR-HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPR 165
L++ +E+D+++ + HPN+I+ ET +++ + +KG L D++ + + E
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 166 TKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL 225
T+K R L++ I H+ +VHRD+K EN+L+D + NIKL+DFGF+ C+ L
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPGEKL 180
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYS-----DVWSMGVVLYAMAFGRLPFDDTNYIQLLK 280
+ CG+ +Y +PEI++ H D+WS GV++Y + G PF + +L+
Sbjct: 181 REV-CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 281 QVQT 284
+ +
Sbjct: 240 MIMS 243
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 121/232 (52%), Gaps = 18/232 (7%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP 112
D KKK T E IG G+ TV A G +VA++ ++ + P K+ +
Sbjct: 17 DPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELII 65
Query: 113 REIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQ 172
EI V++ ++PN++ +L + ++++MEY GSL D + E +DE + R+
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRE 124
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
+ A+++ H V+HRDIK +N+L+ + ++KL+DFGF + + +S + G+
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC-AQITPEQSKRSXM----VGT 179
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
+ +PE++ Y P D+WS+G++ M G P+ + N ++ L + T
Sbjct: 180 PYWMAPEVVTRKAYGPKV-DIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT 230
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
Query: 113 REIDVVKGLR-HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR 171
+E+D+++ + HPN+I+ ET +++ + +KG L D++ + + E T+K R
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 118
Query: 172 QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCG 231
L++ I H+ +VHRD+K EN+L+D + NIKL+DFGF+ C+ L + CG
Sbjct: 119 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPGEKLREV-CG 172
Query: 232 SYAYASPEILKGVPYTPHYS-----DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
+ +Y +PEI++ H D+WS GV++Y + G PF + +L+ + +
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 230
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 40 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 95
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 96 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 211
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 271
Query: 304 KIFS 307
++ +
Sbjct: 272 RLMA 275
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 32 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 87
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 88 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 203
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 263
Query: 304 KIFS 307
++ +
Sbjct: 264 RLMA 267
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 102/184 (55%), Gaps = 12/184 (6%)
Query: 107 LKKFLPREIDVVKGLR-HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPR 165
L++ +E+D+++ + HPN+I+ ET +++ + +KG L D++ + + E
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 166 TKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL 225
T+K R L++ I H+ +VHRD+K EN+L+D + NIKL+DFGF+ C+ L
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-----CQLDPGEKL 180
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYS-----DVWSMGVVLYAMAFGRLPFDDTNYIQLLK 280
+ CG+ +Y +PEI++ H D+WS GV++Y + G PF + +L+
Sbjct: 181 R-SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 281 QVQT 284
+ +
Sbjct: 240 MIMS 243
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 15/251 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ + K IG G ++ V A G VA+K V + + +EID++K L HPN
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ----REGYIDEPRTKKWFRQLVDAIDYCH 181
+I++ + + + I++E A+ G L I+ ++ I E K+F QL A+++ H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
R V+HRDIK N+ I +KL D G R ++ + + G+ Y SPE +
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF-----SSKTTAAHSLVGTPYYMSPERI 208
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLKQVQTKVVFPTEP--NVSAE 297
Y SD+WS+G +LY MA + PF D N L K+++ + +P P + S E
Sbjct: 209 HENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEE 266
Query: 298 CKTLLSKIFSP 308
+ L++ +P
Sbjct: 267 LRQLVNMCINP 277
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 138/291 (47%), Gaps = 46/291 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 60
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 121 EAVRHCHNXGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 167
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVF 222
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGV 336
F VS EC+ L+ + P R ++I+ PW++ P +A +
Sbjct: 223 F--RQRVSXECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEI 270
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 46/291 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 63
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 64 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 123
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 124 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 170
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVF 225
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGV 336
F VS+EC+ L+ + P R ++I+ PW++ P +A +
Sbjct: 226 F--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEI 273
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 39 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 94
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 95 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 153
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 210
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 270
Query: 304 KIFS 307
++ +
Sbjct: 271 RLMA 274
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 131/316 (41%), Gaps = 66/316 (20%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEA----PPDYLKKFLPREIDVVKGL 121
Y L IG GSY V++A + A+K+++K + P D + + E+ ++K L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER--IKTEVRLMKKL 85
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLD---------------------------- 153
HPN+ R + E + ++ME G LLD
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 154 -----------------FIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLL 196
F+QRE I RQ+ A+ Y H +G+ HRDIK EN L
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLIS-----NIMRQIFSALHYLHNQGICHRDIKPENFL 200
Query: 197 I--DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV--PYTPHYSD 252
+ + IKL DFG ++ K +G ++ T G+ + +PE+L Y P D
Sbjct: 201 FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT-TKAGTPYFVAPEVLNTTNESYGPK-CD 258
Query: 253 VWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPN---VSAECKTLLSKIFS-P 308
WS GV+L+ + G +PF N + QV K + PN +S + LLS + +
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRN 318
Query: 309 IKFRIRLKDIKQDPWV 324
+ R Q PW+
Sbjct: 319 VDERFDAMRALQHPWI 334
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 46/291 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 60
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 167
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I ++ +V
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVF 222
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGV 336
F VS+EC+ L+ + P R ++I+ PW++ P +A +
Sbjct: 223 F--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEI 270
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 40 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 95
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 96 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 154
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 211
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 271
Query: 304 KIFS 307
++ +
Sbjct: 272 RLMA 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ A+ +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPAFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 12 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 67
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 68 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 183
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 304 KIFS 307
++ +
Sbjct: 244 RLMA 247
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 30/267 (11%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVA---VKVVSKVEAPPDYLKKFLPREIDV 117
MEN V + IG G+Y V A + G VA +++ ++ E P REI +
Sbjct: 2 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI----REISL 55
Query: 118 VKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVD 175
+K L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
+ +CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y
Sbjct: 115 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----Y 169
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFP 289
+PEIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 290 T-------EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPL 256
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 30/267 (11%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVA---VKVVSKVEAPPDYLKKFLPREIDV 117
MEN V + IG G+Y V A + G VA +++ ++ E P REI +
Sbjct: 1 MENFQKV--EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI----REISL 54
Query: 118 VKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQLVD 175
+K L HPN+++ L I T +++Y++ E+ + L F+ I P K + QL+
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
+ +CH V+HRD+K +NLLI+ E IKL+DFG AR + + + Y
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW-----Y 168
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQT-----KVVFP 289
+PEIL G Y D+WS+G + M R F D+ QL + +T +VV+P
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 290 T-------EPNVSAECKTLLSKIFSPI 309
+P+ + SK+ P+
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPL 255
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 12 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 67
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 68 LFM-GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 183
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 304 KIFS 307
++ +
Sbjct: 244 RLMA 247
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 17 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 72
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 73 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 188
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 248
Query: 304 KIFS 307
++ +
Sbjct: 249 RLMA 252
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 14 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 69
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 70 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 128
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 185
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 245
Query: 304 KIFS 307
++ +
Sbjct: 246 RLMA 249
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 17 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 72
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 73 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 188
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 248
Query: 304 KIFS 307
++ +
Sbjct: 249 RLMA 252
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 121/244 (49%), Gaps = 12/244 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G+ IG GS+ TV HG DVAVK+++ P L+ F E+ V++ RH N++
Sbjct: 12 VGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 67
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
F+ T ++ I+ ++ E SL + E + + RQ +DY H + ++
Sbjct: 68 LFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K N+ + + +K+ DFG A + HQ + GS + +PE+++
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ---FEQLSGSILWMAPEVIRMQDK 183
Query: 247 TPH--YSDVWSMGVVLYAMAFGRLPFDD-TNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
P+ SDV++ G+VLY + G+LP+ + N Q++ V + P V + C +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243
Query: 304 KIFS 307
++ +
Sbjct: 244 RLMA 247
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 138/291 (47%), Gaps = 46/291 (15%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--------LPREIDV 117
Y +G ++G G + +V VA+K V K D + + +P E+ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK-----DRISDWGELPNGTRVPMEVVL 60
Query: 118 VKGLR--HPNLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLV 174
+K + +IR L E +I+E E L DFI G + E + +F Q++
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 175 DAIDYCHERGVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT--- 228
+A+ +CH GV+HRDIK EN+LID GE +KL DFG SG + L DT
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYT 167
Query: 229 -FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVV 287
F G+ Y+ PE ++ Y + VWS+G++LY M G +PF+ I + +V
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IGGQVF 222
Query: 288 FPTEPNVSAECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGV 336
F VS+EC+ L+ + P R ++I+ PW++ P +A +
Sbjct: 223 F--RQRVSSECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEI 270
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 24/275 (8%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV--SKVEAPPDYLKKFLPREIDVVKGLRH 123
Y L +VIG G ++ V+ + G AVK+V +K + P + L RE + L+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSL-LDFIQRE--GYI-DEPRTKKWFRQLVDAIDY 179
P+++ L+ + +Y++ E+ + L + ++R G++ E + RQ+++A+ Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 180 CHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYA 236
CH+ ++HRD+K +L+ + N +KL FG A + G ++ G+ +
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-----IQLGESGLVAGGRVGTPHFM 202
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP---- 292
+PE++K PY DVW GV+L+ + G LPF T + L + K + P
Sbjct: 203 APEVVKREPYGKPV-DVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWS 259
Query: 293 NVSAECKTLLSK--IFSPIKFRIRLKDIKQDPWVK 325
++S K L+ + + P + RI + + PW+K
Sbjct: 260 HISESAKDLVRRMLMLDPAE-RITVYEALNHPWLK 293
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 15/219 (6%)
Query: 59 TVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREI 115
+++E+H Y +G+ +G G +A V+ G + A K + K ++ + RE+
Sbjct: 1 SMVEDH-YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREV 59
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++++ +RHPN+I E V +I+E G L DF+ + + E ++ +Q++D
Sbjct: 60 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119
Query: 176 AIDYCHERGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCG 231
+ Y H + + H D+K EN +L+D IKL DFG A K ++G++ + F G
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNE--FKNIF-G 173
Query: 232 SYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+ + +PEI+ P +D+WS+GV+ Y + G PF
Sbjct: 174 TPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASPF 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 115/219 (52%), Gaps = 15/219 (6%)
Query: 59 TVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK---VEAPPDYLKKFLPREI 115
+++E+H Y +G+ +G G +A V+ G + A K + K + ++ + RE+
Sbjct: 22 SMVEDH-YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREV 80
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD 175
++++ +RHPN+I E V +I+E G L DF+ + + E ++ +Q++D
Sbjct: 81 NILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 140
Query: 176 AIDYCHERGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCG 231
+ Y H + + H D+K EN +L+D IKL DFG A K ++G++ + F G
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNE--FKNIF-G 194
Query: 232 SYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+ + +PEI+ P +D+WS+GV+ Y + G PF
Sbjct: 195 TPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASPF 232
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 15/251 (5%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD-YLKKFLPREIDVVKGLRHPNLIRF 129
++G GSY V + G VA+K +E+ D +KK REI ++K LRH NL+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIK--KFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
L+ + R Y++ E+ + L D +D +K+ Q+++ I +CH ++HRD
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRD 149
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
IK EN+L+ +KL DFGFAR + D + Y +PE+L G
Sbjct: 150 IKPENILVSQSGVVKLCDFGFAR-----TLAAPGEVYDDEVATRWYRAPELLVGDVKYGK 204
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPI 309
DVW++G ++ M G F + I L + + N+ + L +K +P+
Sbjct: 205 AVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCL-----GNLIPRHQELFNK--NPV 257
Query: 310 KFRIRLKDIKQ 320
+RL +IK+
Sbjct: 258 FAGVRLPEIKE 268
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+GK IG GSY V + G VA+K + E P +KK REI ++K L+HPNL+
Sbjct: 8 IGK-IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDP-VIKKIALREIRMLKQLKHPNLV 65
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVH 187
L+ R++++ EY + L + + + + E K Q + A+++CH+ +H
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 188 RDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG-VPY 246
RD+K EN+LI IKL DFGFAR +G S D + Y SPE+L G Y
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFAR----LLTG-PSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 247 TPHYSDVWSMGVVLYAMAFG 266
P DVW++G V + G
Sbjct: 181 GPP-VDVWAIGCVFAELLSG 199
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 24/275 (8%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVV--SKVEAPPDYLKKFLPREIDVVKGLRH 123
Y L +VIG G ++ V+ + G AVK+V +K + P + L RE + L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSL-LDFIQRE--GYI-DEPRTKKWFRQLVDAIDY 179
P+++ L+ + +Y++ E+ + L + ++R G++ E + RQ+++A+ Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 180 CHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYA 236
CH+ ++HRD+K +L+ + N +KL FG A + G ++ G+ +
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-----IQLGESGLVAGGRVGTPHFM 200
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP---- 292
+PE++K PY DVW GV+L+ + G LPF T + L + K + P
Sbjct: 201 APEVVKREPYGKPV-DVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNPRQWS 257
Query: 293 NVSAECKTLLSK--IFSPIKFRIRLKDIKQDPWVK 325
++S K L+ + + P + RI + + PW+K
Sbjct: 258 HISESAKDLVRRMLMLDPAE-RITVYEALNHPWLK 291
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 54/286 (18%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF- 129
V+G G++ V R+ D + K+ + L L E+ ++ L H ++R+
Sbjct: 13 VLGQGAFGQV---VKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVRYY 68
Query: 130 ------------LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKW--FRQLVD 175
+ A++ ++I MEY E G+L D I E +++ R + W FRQ+++
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILE 127
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-H-----MKCKSGHQSPLSDTF 229
A+ Y H +G++HRD+K N+ ID N+K+ DFG A+ H +K S + SD
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 230 ---CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF----DDTNYIQLLKQV 282
G+ Y + E+L G + D++S+G++ + M + PF + N ++ L+ V
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSV 244
Query: 283 Q------------------TKVVFPTEPNVSAECKTLLSKIFSPIK 310
+++ +PN +TLL+ + P+K
Sbjct: 245 SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 15/217 (6%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDV 117
+E+H Y +G+ +G G +A V+ G + A K + K ++ + RE+++
Sbjct: 10 VEDH-YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 118 VKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAI 177
++ +RHPN+I E V +I+E G L DF+ + + E ++ +Q++D +
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 128
Query: 178 DYCHERGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
Y H + + H D+K EN +L+D IKL DFG A K ++G++ + F G+
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNE--FKNIF-GTP 182
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+ +PEI+ P +D+WS+GV+ Y + G PF
Sbjct: 183 EFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASPF 218
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L K +G G + V +AT +H KV K P + E +V+K L+H L+
Sbjct: 192 LEKKLGAGQFGEVWMATYNKH-----TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGV 185
+ L A+ T +YII E+ KGSLLDF++ + +P K + Q+ + + + +R
Sbjct: 247 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 305
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+HRD++ N+L+ K++DFG AR + G + P+ + +PE +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK--------WTAPEAI 357
Query: 242 KGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT 300
+T SDVWS G++L + +GR+P+ + ++++ ++ P N E
Sbjct: 358 NFGSFTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN 416
Query: 301 LLSKIF 306
++ + +
Sbjct: 417 IMMRCW 422
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 115/228 (50%), Gaps = 31/228 (13%)
Query: 125 NLIRFLQAIETTHRVYIIMEYAEK-GSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR L E +I+E E L DFI G + E + +F Q+++A+ +CH
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 184 GVVHRDIKCENLLID---GEYNIKLSDFGFARGHMKCKSGHQSPLSDT----FCGSYAYA 236
GV+HRDIK EN+LID GE +KL DFG SG + L DT F G+ Y+
Sbjct: 177 GVLHRDIKDENILIDLNRGE--LKLIDFG---------SG--ALLKDTVYTDFDGTRVYS 223
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE ++ Y + VWS+G++LY M G +PF+ I ++ +V F VS+
Sbjct: 224 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQVFF--RQRVSS 276
Query: 297 ECKTLLSKIFS--PIKFRIRLKDIKQDPWVKTEANPAASAGVETKTLN 342
EC+ L+ + P R ++I+ PW++ P +A + +L+
Sbjct: 277 ECQHLIRWCLALRPSD-RPTFEEIQNHPWMQDVLLPQETAEIHLHSLS 323
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 185
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 186 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 245 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 275
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L K +G G + V +AT +H KV K P + E +V+K L+H L+
Sbjct: 19 LEKKLGAGQFGEVWMATYNKH-----TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV 73
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGV 185
+ L A+ T +YII E+ KGSLLDF++ + +P K + Q+ + + + +R
Sbjct: 74 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+HRD++ N+L+ K++DFG AR + G + P+ + +PE +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK--------WTAPEAI 184
Query: 242 KGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT 300
+T SDVWS G++L + +GR+P+ + ++++ ++ P N E
Sbjct: 185 NFGSFTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN 243
Query: 301 LLSKIF 306
++ + +
Sbjct: 244 IMMRCW 249
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 185
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 186 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 244
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 245 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVS--KVEAPPDYLKKFLPREIDVVKGLRH 123
Y L +VIG G+ A V+ A VA+K ++ K + D L K EI + H
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK----EIQAMSQCHH 72
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ--------REGYIDEPRTKKWFRQLVD 175
PN++ + + ++++M+ GS+LD I+ + G +DE R++++
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
++Y H+ G +HRD+K N+L+ + +++++DFG + ++ + TF G+ +
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+PE+++ V +D+WS G+ +A G P+
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I+E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 114 EIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL 173
EI + + L H +++ F E V++++E + SLL+ +R + EP + + RQ+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
V Y H V+HRD+K NL ++ + +K+ DFG A K + T CG+
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKTLCGTP 181
Query: 234 AYASPEIL--KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDT 273
Y +PE+L KG + DVWS+G ++Y + G+ PF+ +
Sbjct: 182 NYIAPEVLSKKGHSFE---VDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 114 EIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL 173
EI + + L H +++ F E V++++E + SLL+ +R + EP + + RQ+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
V Y H V+HRD+K NL ++ + +K+ DFG A K + T CG+
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKTLCGTP 181
Query: 234 AYASPEIL--KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDT 273
Y +PE+L KG + DVWS+G ++Y + G+ PF+ +
Sbjct: 182 NYIAPEVLSKKGHSFE---VDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 114 EIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL 173
EI + + L H +++ F E V++++E + SLL+ +R + EP + + RQ+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
V Y H V+HRD+K NL ++ + +K+ DFG A K + T CG+
Sbjct: 131 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKTLCGTP 185
Query: 234 AYASPEIL--KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDT 273
Y +PE+L KG + DVWS+G ++Y + G+ PF+ +
Sbjct: 186 NYIAPEVLSKKGHSFE---VDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVS--KVEAPPDYLKKFLPREIDVVKGLRH 123
Y L +VIG G+ A V+ A VA+K ++ K + D L K EI + H
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLK----EIQAMSQCHH 67
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ--------REGYIDEPRTKKWFRQLVD 175
PN++ + + ++++M+ GS+LD I+ + G +DE R++++
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
++Y H+ G +HRD+K N+L+ + +++++DFG + ++ + TF G+ +
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+PE+++ V +D+WS G+ +A G P+
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 24/242 (9%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L K +G G + V +AT +H KV K P + E +V+K L+H L+
Sbjct: 186 LEKKLGAGQFGEVWMATYNKH-----TKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLV 240
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGV 185
+ L A+ T +YII E+ KGSLLDF++ + +P K + Q+ + + + +R
Sbjct: 241 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 299
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD++ N+L+ K++DFG AR G + P+ + +PE +
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLAR------VGAKFPIK--------WTAPEAINFGS 345
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVWS G++L + +GR+P+ + ++++ ++ P N E ++ +
Sbjct: 346 FTIK-SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR 404
Query: 305 IF 306
+
Sbjct: 405 CW 406
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS V +AT G VAVK K++ ++ L E+ +++ H N++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ ++++ME+ E G+L D + ++E + ++ A+ Y H +GV+HRDIK
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+++L+ + IKLSDFGF + + P G+ + +PE++ +PY
Sbjct: 169 SDSILLTSDGRIKLSDFGFC-----AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV- 222
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
D+WS+G+++ M G P+ + +Q +++++
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIR 254
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS V +AT G VAVK K++ ++ L E+ +++ +H N++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ ++++ME+ E G+L D + ++E + ++ A+ H +GV+HRDIK
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+++L+ + +KLSDFGF + + P G+ + +PE++ +PY P
Sbjct: 275 SDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV- 328
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
D+WS+G+++ M G P+ + ++ +K ++
Sbjct: 329 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 360
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 129/245 (52%), Gaps = 15/245 (6%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
V+G G+Y V + +A+K + + ++ + L EI + K L+H N++++L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 131 QAIETTHRVYIIMEYAEKGSLLDFIQRE-GYI-DEPRTKKWF-RQLVDAIDYCHERGVVH 187
+ + I ME GSL ++ + G + D +T ++ +Q+++ + Y H+ +VH
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 188 RDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL-KGVP 245
RDIK +N+LI+ + K+SDFG ++ + +P ++TF G+ Y +PEI+ KG
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSK-----RLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ-LLKQVQTKVVFPTEP-NVSAECKTLLS 303
+D+WS+G + MA G+ PF + Q + +V V P P ++SAE K +
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 260
Query: 304 KIFSP 308
K F P
Sbjct: 261 KCFEP 265
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 18/270 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y +G+ +G G +A VK G + A K + K ++ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I E V +I+E G L DF+ ++ + E + +Q++D ++Y H
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ + H D+K EN +L+D +IKL DFG A + + G + + F G+ + +P
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVE--FKNIF-GTPEFVAP 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E S
Sbjct: 188 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 296 AECKTLLSKIF-SPIKFRIRLKDIKQDPWV 324
K + K+ + R+ +++ + PW+
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS V +AT G VAVK K++ ++ L E+ +++ +H N++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ ++++ME+ E G+L D + ++E + ++ A+ H +GV+HRDIK
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+++L+ + +KLSDFGF + + P G+ + +PE++ +PY P
Sbjct: 155 SDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV- 208
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
D+WS+G+++ M G P+ + ++ +K ++
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 240
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 20/272 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y G+ +G G +A VK G A K + K ++ + RE+ ++K ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
HPN+I + E V +I E G L DF+ + + E ++ +Q+++ + Y H
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ H D+K EN +L+D IK+ DFG A K G++ + F G+ + +P
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNE--FKNIF-GTPEFVAP 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E N S
Sbjct: 187 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS 245
Query: 296 AECKTLLSKIF--SPIKFRIRLKDIKQDPWVK 325
A K + ++ P K R+ ++D Q PW+K
Sbjct: 246 ALAKDFIRRLLVKDPKK-RMTIQDSLQHPWIK 276
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS V +AT G VAVK K++ ++ L E+ +++ +H N++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ ++++ME+ E G+L D + ++E + ++ A+ H +GV+HRDIK
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+++L+ + +KLSDFGF + + P G+ + +PE++ +PY P
Sbjct: 153 SDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV- 206
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
D+WS+G+++ M G P+ + ++ +K ++
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 238
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS V +AT G VAVK K++ ++ L E+ +++ +H N++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ ++++ME+ E G+L D + ++E + ++ A+ H +GV+HRDIK
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+++L+ + +KLSDFGF + + P G+ + +PE++ +PY P
Sbjct: 148 SDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV- 201
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
D+WS+G+++ M G P+ + ++ +K ++
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 233
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 54/286 (18%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF- 129
V+G G++ V R+ D + K+ + L L E+ ++ L H ++R+
Sbjct: 13 VLGQGAFGQV---VKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVRYY 68
Query: 130 ------------LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKW--FRQLVD 175
+ A++ ++I MEY E +L D I E +++ R + W FRQ+++
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQILE 127
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-H-----MKCKSGHQSPLSDTF 229
A+ Y H +G++HRD+K N+ ID N+K+ DFG A+ H +K S + SD
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 230 ---CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF----DDTNYIQLLKQV 282
G+ Y + E+L G + D++S+G++ + M + PF + N ++ L+ V
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSV 244
Query: 283 Q------------------TKVVFPTEPNVSAECKTLLSKIFSPIK 310
+++ +PN +TLL+ + P+K
Sbjct: 245 SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS V +AT G VAVK K++ ++ L E+ +++ +H N++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ ++++ME+ E G+L D + ++E + ++ A+ H +GV+HRDIK
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+++L+ + +KLSDFGF + + P G+ + +PE++ +PY P
Sbjct: 144 SDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV- 197
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
D+WS+G+++ M G P+ + ++ +K ++
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 110/212 (51%), Gaps = 10/212 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS V +AT G VAVK K++ ++ L E+ +++ +H N++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ ++++ME+ E G+L D + ++E + ++ A+ H +GV+HRDIK
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+++L+ + +KLSDFGF + + P G+ + +PE++ +PY P
Sbjct: 198 SDSILLTHDGRVKLSDFGFC-----AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV- 251
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
D+WS+G+++ M G P+ + ++ +K ++
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 283
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 114 EIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL 173
EI + + L H +++ F E V++++E + SLL+ +R + EP + + RQ+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
V Y H V+HRD+K NL ++ + +K+ DFG A K + CG+
Sbjct: 149 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTP 203
Query: 234 AYASPEIL--KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDT 273
Y +PE+L KG + DVWS+G ++Y + G+ PF+ +
Sbjct: 204 NYIAPEVLSKKGHSFE---VDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 129/245 (52%), Gaps = 15/245 (6%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
V+G G+Y V + +A+K + + ++ + L EI + K L+H N++++L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 131 QAIETTHRVYIIMEYAEKGSLLDFIQ-REGYI-DEPRTKKWF-RQLVDAIDYCHERGVVH 187
+ + I ME GSL ++ + G + D +T ++ +Q+++ + Y H+ +VH
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 188 RDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL-KGVP 245
RDIK +N+LI+ + K+SDFG ++ + +P ++TF G+ Y +PEI+ KG
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSK-----RLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ-LLKQVQTKVVFPTEP-NVSAECKTLLS 303
+D+WS+G + MA G+ PF + Q + +V V P P ++SAE K +
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFIL 246
Query: 304 KIFSP 308
K F P
Sbjct: 247 KCFEP 251
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 114 EIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL 173
EI + + L H +++ F E V++++E + SLL+ +R + EP + + RQ+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
V Y H V+HRD+K NL ++ + +K+ DFG A K + CG+
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTP 205
Query: 234 AYASPEIL--KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDT 273
Y +PE+L KG + DVWS+G ++Y + G+ PF+ +
Sbjct: 206 NYIAPEVLSKKGHSFE---VDVWSIGCIMYTLLVGKPPFETS 244
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 21/272 (7%)
Query: 63 NHGYVLGK--VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
N Y + K ++G G + V T G +A K++ K D K+ + EI V+
Sbjct: 86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKII-KTRGMKD--KEEVKNEISVMNQ 142
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDY 179
L H NLI+ A E+ + + ++MEY + G L D I E Y + E T + +Q+ + I +
Sbjct: 143 LDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRH 202
Query: 180 CHERGVVHRDIKCENLLI---DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYA 236
H+ ++H D+K EN+L D + IK+ DFG AR + + L F G+ +
Sbjct: 203 MHQMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKP-----REKLKVNF-GTPEFL 255
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTEPN 293
+PE++ + +D+WS+GV+ Y + G PF N + L + + + +
Sbjct: 256 APEVV-NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD 314
Query: 294 VSAECKTLLSKIFSPIK-FRIRLKDIKQDPWV 324
+S E K +SK+ K +RI + + PW+
Sbjct: 315 ISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 114 EIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL 173
EI + + L H +++ F E V++++E + SLL+ +R + EP + + RQ+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
V Y H V+HRD+K NL ++ + +K+ DFG A K + CG+
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA-----TKVEYDGERKKVLCGTP 179
Query: 234 AYASPEIL--KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDT 273
Y +PE+L KG + DVWS+G ++Y + G+ PF+ +
Sbjct: 180 NYIAPEVLSKKGHSFE---VDVWSIGCIMYTLLVGKPPFETS 218
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G+Y V A + +G A+K + ++E + + REI ++K L+H N+++
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 132 AIETTHRVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
I T R+ ++ E+ ++ LLD EG ++ K + QL++ I YCH+R V+HRD
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 190 IKCENLLIDGEYNIKLSDFGFAR--GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYT 247
+K +NLLI+ E +K++DFG AR G K H+ + Y +P++L G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------VVTLWYRAPDVLMGSKKY 178
Query: 248 PHYSDVWSMGVVLYAMAFG 266
D+WS+G + M G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G+Y V A + +G A+K + ++E + + REI ++K L+H N+++
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 132 AIETTHRVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
I T R+ ++ E+ ++ LLD EG ++ K + QL++ I YCH+R V+HRD
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 190 IKCENLLIDGEYNIKLSDFGFAR--GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYT 247
+K +NLLI+ E +K++DFG AR G K H+ + Y +P++L G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------VVTLWYRAPDVLMGSKKY 178
Query: 248 PHYSDVWSMGVVLYAMAFG 266
D+WS+G + M G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G+Y V A + +G A+K + ++E + + REI ++K L+H N+++
Sbjct: 10 IGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 132 AIETTHRVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
I T R+ ++ E+ ++ LLD EG ++ K + QL++ I YCH+R V+HRD
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRD 125
Query: 190 IKCENLLIDGEYNIKLSDFGFAR--GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYT 247
+K +NLLI+ E +K++DFG AR G K H+ + Y +P++L G
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHE-------IVTLWYRAPDVLMGSKKY 178
Query: 248 PHYSDVWSMGVVLYAMAFG 266
D+WS+G + M G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 36/289 (12%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR-HPNLIRF 129
V+G G++A V+ + + AVK++ K P +++ + RE++++ + H N++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
++ E R Y++ E GS+L I + + +E + + A+D+ H +G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 190 IKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSD----TFCGSYAYASPEILK 242
+K EN+L + +K+ DFG G +K +G SP+S T CGS Y +PE+++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSG-IK-LNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 243 GVPYTPHY----SDVWSMGVVLYAMAFGRLPF-----DDTNYIQ----------LLKQVQ 283
D+WS+GV+LY + G PF D + + L + +Q
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ 254
Query: 284 T-KVVFPTE--PNVSAECKTLLSKIF-SPIKFRIRLKDIKQDPWVKTEA 328
K FP + ++S K L+SK+ K R+ + Q PWV+ A
Sbjct: 255 EGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 140/279 (50%), Gaps = 23/279 (8%)
Query: 62 ENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVS--KVEAPPDYLKKFLPREIDVVK 119
E+ ++G+ +G G++ V A + A KV+ E DY+ EID++
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM-----VEIDILA 89
Query: 120 GLRHPNLIRFLQAIETTHRVYIIMEYAEKGSL-LDFIQREGYIDEPRTKKWFRQLVDAID 178
HPN+++ L A + ++I++E+ G++ ++ E + E + + +Q +DA++
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
Y H+ ++HRD+K N+L + +IKL+DFG + K+ D+F G+ + +P
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAP 204
Query: 239 EIL-----KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ-LLKQVQTKVVFPTEP 292
E++ K PY + +DVWS+G+ L MA P + N ++ LLK +++ +P
Sbjct: 205 EVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP 263
Query: 293 N-VSAECKTLLSKIFSP-IKFRIRLKDIKQDPWVKTEAN 329
+ S+ K L K + R + Q P+V ++N
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 140/279 (50%), Gaps = 23/279 (8%)
Query: 62 ENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVS--KVEAPPDYLKKFLPREIDVVK 119
E+ ++G+ +G G++ V A + A KV+ E DY+ EID++
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM-----VEIDILA 89
Query: 120 GLRHPNLIRFLQAIETTHRVYIIMEYAEKGSL-LDFIQREGYIDEPRTKKWFRQLVDAID 178
HPN+++ L A + ++I++E+ G++ ++ E + E + + +Q +DA++
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
Y H+ ++HRD+K N+L + +IKL+DFG + K+ D+F G+ + +P
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDSFIGTPYWMAP 204
Query: 239 EIL-----KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ-LLKQVQTKVVFPTEP 292
E++ K PY + +DVWS+G+ L MA P + N ++ LLK +++ +P
Sbjct: 205 EVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP 263
Query: 293 N-VSAECKTLLSKIFSP-IKFRIRLKDIKQDPWVKTEAN 329
+ S+ K L K + R + Q P+V ++N
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 139/279 (49%), Gaps = 23/279 (8%)
Query: 62 ENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVS--KVEAPPDYLKKFLPREIDVVK 119
E+ ++G+ +G G++ V A + A KV+ E DY+ EID++
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM-----VEIDILA 89
Query: 120 GLRHPNLIRFLQAIETTHRVYIIMEYAEKGSL-LDFIQREGYIDEPRTKKWFRQLVDAID 178
HPN+++ L A + ++I++E+ G++ ++ E + E + + +Q +DA++
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 179 YCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
Y H+ ++HRD+K N+L + +IKL+DFG + K+ D F G+ + +P
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDXFIGTPYWMAP 204
Query: 239 EIL-----KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ-LLKQVQTKVVFPTEP 292
E++ K PY + +DVWS+G+ L MA P + N ++ LLK +++ +P
Sbjct: 205 EVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP 263
Query: 293 N-VSAECKTLLSKIFSP-IKFRIRLKDIKQDPWVKTEAN 329
+ S+ K L K + R + Q P+V ++N
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 133/282 (47%), Gaps = 18/282 (6%)
Query: 55 KKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
K K + + + KVIG G++ V + A+K+++K E E
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 115 IDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQL 173
DV+ + A + + +Y++M+Y G LL + + E + E + + ++
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
V AID H+ VHRDIK +N+L+D +I+L+DFG M+ + S G+
Sbjct: 185 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS----VAVGTP 240
Query: 234 AYASPEILKGVP-----YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTK 285
Y SPEIL+ + Y P D WS+GV +Y M +G PF + ++ ++ + +
Sbjct: 241 DYISPEILQAMEGGKGRYGPE-CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 299
Query: 286 VVFPTE-PNVSAECKTLLSKIFSPIKFRI---RLKDIKQDPW 323
FPT+ +VS K L+ ++ + R+ ++D K+ P+
Sbjct: 300 FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 118/219 (53%), Gaps = 19/219 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVS--KVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
+G G++ V A + G A KV+ E DY+ EI+++ HP +++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV-----EIEILATCDHPYIVKL 81
Query: 130 LQAIETTHRVYIIMEYAEKGSL-LDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
L A +++I++E+ G++ ++ + + EP+ + RQ+++A+++ H + ++HR
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 141
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI-----LKG 243
D+K N+L+ E +I+L+DFG + ++K D+F G+ + +PE+ +K
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-----DSFIGTPYWMAPEVVMCETMKD 196
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
PY + +D+WS+G+ L MA P + N +++L ++
Sbjct: 197 TPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 234
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 118/219 (53%), Gaps = 19/219 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVS--KVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
+G G++ V A + G A KV+ E DY+ EI+++ HP +++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV-----EIEILATCDHPYIVKL 73
Query: 130 LQAIETTHRVYIIMEYAEKGSL-LDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
L A +++I++E+ G++ ++ + + EP+ + RQ+++A+++ H + ++HR
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 133
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI-----LKG 243
D+K N+L+ E +I+L+DFG + ++K D+F G+ + +PE+ +K
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-----DSFIGTPYWMAPEVVMCETMKD 188
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
PY + +D+WS+G+ L MA P + N +++L ++
Sbjct: 189 TPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 19/270 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + + +G G++ V G V V + P K + EI ++ L HP
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATG---RVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDYCHERG 184
LI A E + + +I+E+ G L D I E Y + E + RQ + + + HE
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 185 VVHRDIKCENLLIDGE--YNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
+VH DIK EN++ + + ++K+ DFG A + + + +A+PEI+
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLA------TKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPF---DDTNYIQLLKQVQTKVVFPTEPNVSAECK 299
P Y+D+W++GV+ Y + G PF DD +Q +K+ + +VS E K
Sbjct: 224 REP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAK 282
Query: 300 TLLSKIF--SPIKFRIRLKDIKQDPWVKTE 327
+ + P K R+ + D + PW+K +
Sbjct: 283 DFIKNLLQKEPRK-RLTVHDALEHPWLKGD 311
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVV---SKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G+YATV + G VA+K V S+ P + REI ++K L+H N++R
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI-----REISLMKELKHENIVR 67
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPR-----TKKWFR-QLVDAIDYCHE 182
I T +++ ++ E+ + L ++ + PR K+F+ QL+ + +CHE
Sbjct: 68 LYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
++HRD+K +NLLI+ +KL DFG AR + S + + Y +P++L
Sbjct: 127 NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW-----YRAPDVLM 181
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTE 291
G D+WS G +L M G+ F TN + LK + + P E
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + + +G G++ V T G + A K V P + K+ + +EI + LRHP
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLRHPT 109
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQRE-GYIDEPRTKKWFRQLVDAIDYCHERG 184
L+ A E + + +I E+ G L + + E + E ++ RQ+ + + HE
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 185 VVHRDIKCENLLIDGEYN--IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VH D+K EN++ + + +KL DFG H+ K + G+ +A+PE+ +
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVK-----VTTGTAEFAAPEVAE 223
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
G P +Y+D+WS+GV+ Y + G PF N + L+ V++
Sbjct: 224 GKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 264
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 18/278 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y +G+ +G G +A VK G + A K + K ++ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
H N+I E V +I+E G L DF+ ++ + E + +Q++D ++Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ + H D+K EN +L+D +IKL DFG A + + G + + F G+ + +P
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVE--FKNIF-GTPEFVAP 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E + S
Sbjct: 188 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 296 AECKTLLSKIF-SPIKFRIRLKDIKQDPWVKTEANPAA 332
K + K+ + R+ +++ + PW+ N A
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + + +G G++ V T G + A K V P + K+ + +EI + LRHP
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVM---TPHESDKETVRKEIQTMSVLRHPT 215
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQRE-GYIDEPRTKKWFRQLVDAIDYCHERG 184
L+ A E + + +I E+ G L + + E + E ++ RQ+ + + HE
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 185 VVHRDIKCENLLIDGEYN--IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VH D+K EN++ + + +KL DFG H+ K + G+ +A+PE+ +
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVK-----VTTGTAEFAAPEVAE 329
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
G P +Y+D+WS+GV+ Y + G PF N + L+ V++
Sbjct: 330 GKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 370
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 137/272 (50%), Gaps = 22/272 (8%)
Query: 70 KVIG-IGSYATVKLATSTRHGCDVAVKVVS--KVEAPPDYLKKFLPREIDVVKGLRHPNL 126
++IG +G + V A + A KV+ E DY+ EID++ HPN+
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYM-----VEIDILASCDHPNI 69
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSL-LDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ L A + ++I++E+ G++ ++ E + E + + +Q +DA++Y H+ +
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI 129
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL---- 241
+HRD+K N+L + +IKL+DFG + + + + D+F G+ + +PE++
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRR----DSFIGTPYWMAPEVVMCET 185
Query: 242 -KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ-LLKQVQTKVVFPTEPN-VSAEC 298
K PY + +DVWS+G+ L MA P + N ++ LLK +++ +P+ S+
Sbjct: 186 SKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 244
Query: 299 KTLLSKIFSP-IKFRIRLKDIKQDPWVKTEAN 329
K L K + R + Q P+V ++N
Sbjct: 245 KDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 18/278 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y +G+ +G G +A VK G + A K + K ++ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
H N+I E V +I+E G L DF+ ++ + E + +Q++D ++Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ + H D+K EN +L+D +IKL DFG A + + G + + F G+ + +P
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVE--FKNIF-GTPEFVAP 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E + S
Sbjct: 188 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 296 AECKTLLSKIF-SPIKFRIRLKDIKQDPWVKTEANPAA 332
K + K+ + R+ +++ + PW+ N A
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 18/278 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y +G+ +G G +A VK G + A K + K ++ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
H N+I E V +I+E G L DF+ ++ + E + +Q++D ++Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ + H D+K EN +L+D +IKL DFG A + + G + + F G+ + +P
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVE--FKNIF-GTPEFVAP 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E + S
Sbjct: 188 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTS 246
Query: 296 AECKTLLSKIF-SPIKFRIRLKDIKQDPWVKTEANPAA 332
K + K+ + R+ +++ + PW+ N A
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 19/215 (8%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+L IG GS+ TV HG DVAVK++ V+ P+ + F E+ V++ RH N+
Sbjct: 39 MLSTRIGSGSFGTV--YKGKWHG-DVAVKILKVVDPTPEQFQAF-RNEVAVLRKTRHVNI 94
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKW-----FRQLVDAIDYCH 181
+ F+ + T + I+ ++ E SL + ++ E + + + RQ +DY H
Sbjct: 95 LLFMGYM-TKDNLAIVTQWCEGSSLYKHL----HVQETKFQMFQLIDIARQTAQGMDYLH 149
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+ ++HRD+K N+ + +K+ DFG A + SG Q T GS + +PE++
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW-SGSQQVEQPT--GSVLWMAPEVI 206
Query: 242 KGVPYTP--HYSDVWSMGVVLYAMAFGRLPFDDTN 274
+ P SDV+S G+VLY + G LP+ N
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 18/278 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y +G+ +G G +A VK G + A K + K ++ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
H N+I E V +I+E G L DF+ ++ + E + +Q++D ++Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ + H D+K EN +L+D +IKL DFG A + + G + + F G+ + +P
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVE--FKNIF-GTPEFVAP 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E S
Sbjct: 188 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 296 AECKTLLSKIF-SPIKFRIRLKDIKQDPWVKTEANPAA 332
K + K+ + R+ +++ + PW+ N A
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 52 RDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFL 111
R V K V+ + VLG+ IG G++ V VAVK + PPD KFL
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFL 160
Query: 112 PREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR 171
+E ++K HPN++R + +YI+ME + G L F++ EG R K +
Sbjct: 161 -QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQ 217
Query: 172 QLVDA---IDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT 228
+ DA ++Y + +HRD+ N L+ + +K+SDFG +R L
Sbjct: 218 MVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV 277
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ +PE L Y+ SDVWS G++L+ + G P+ + +
Sbjct: 278 ---PVKWTAPEALNYGRYSSE-SDVWSFGILLWETFSLGASPYPNLS 320
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 18/278 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPD---YLKKFLPREIDVVKGLR 122
Y +G+ +G G +A VK G + A K + K ++ ++ + RE+ +++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
H N+I E V +I+E G L DF+ ++ + E + +Q++D ++Y H
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 RGVVHRDIKCEN-LLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASP 238
+ + H D+K EN +L+D +IKL DFG A + + G + + F G+ + +P
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVE--FKNIF-GTPEFVAP 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF-DDTNYIQLLKQVQTKVVFPTE--PNVS 295
EI+ P +D+WS+GV+ Y + G PF DT L F E S
Sbjct: 188 EIVNYEPLGLE-ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS 246
Query: 296 AECKTLLSKIF-SPIKFRIRLKDIKQDPWVKTEANPAA 332
K + K+ + R+ +++ + PW+ N A
Sbjct: 247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQA 284
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 36/289 (12%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR-HPNLIRF 129
V+G G++A V+ + + AVK++ K P +++ + RE++++ + H N++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK---QPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
++ E R Y++ E GS+L I + + +E + + A+D+ H +G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 190 IKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPLSD----TFCGSYAYASPEILK 242
+K EN+L + +K+ DF G +K +G SP+S T CGS Y +PE+++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSG-IK-LNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 243 GVPYTPHY----SDVWSMGVVLYAMAFGRLPF-----DDTNYIQ----------LLKQVQ 283
D+WS+GV+LY + G PF D + + L + +Q
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ 254
Query: 284 T-KVVFPTE--PNVSAECKTLLSKIF-SPIKFRIRLKDIKQDPWVKTEA 328
K FP + ++S K L+SK+ K R+ + Q PWV+ A
Sbjct: 255 EGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 52 RDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFL 111
R V K V+ + VLG+ IG G++ V VAVK + PPD KFL
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFL 160
Query: 112 PREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR 171
+E ++K HPN++R + +YI+ME + G L F++ EG R K +
Sbjct: 161 -QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQ 217
Query: 172 QLVDA---IDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSG-HQS 223
+ DA ++Y + +HRD+ N L+ + +K+SDFG +R G G Q
Sbjct: 218 MVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV 277
Query: 224 PLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
P+ + +PE L Y+ SDVWS G++L+ + G P+ + +
Sbjct: 278 PVK--------WTAPEALNYGRYSSE-SDVWSFGILLWETFSLGASPYPNLS 320
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 15/254 (5%)
Query: 35 KLDLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAV 94
+L+LD R L A + K+K +++ + +G G+ V + G +A
Sbjct: 6 ELELDEQQRKRLEAFLTQ--KQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMAR 63
Query: 95 KVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDF 154
K++ +E P + + RE+ V+ P ++ F A + + I ME+ + GSL
Sbjct: 64 KLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV 121
Query: 155 IQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDIKCENLLIDGEYNIKLSDFGFARG 213
+++ G I E K ++ + Y E+ ++HRD+K N+L++ IKL DFG + G
Sbjct: 122 LKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-G 180
Query: 214 HMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--D 271
+ ++++F G+ +Y SPE L+G Y+ SD+WSMG+ L MA GR P
Sbjct: 181 QLI------DSMANSFVGTRSYMSPERLQGTHYSVQ-SDIWSMGLSLVEMAVGRYPIPPP 233
Query: 272 DTNYIQLLKQVQTK 285
D ++L+ Q +
Sbjct: 234 DAKELELMFGCQVE 247
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 13/217 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V + G +A K++ +E P + + RE+ V+ P ++ F
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 133
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL +++ G I E K ++ + Y E+ ++HRD+
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + + ++++F G+ +Y SPE L+G Y+
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERLQGTHYSVQ- 245
Query: 251 SDVWSMGVVLYAMAFGRLPF--DDTNYIQLLKQVQTK 285
SD+WSMG+ L MA GR P D ++L+ Q +
Sbjct: 246 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 282
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS V LA G VAVK++ + ++ L E+ +++ +H N++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ ++++ME+ + G+L D + + ++E + ++ A+ Y H +GV+HRDIK
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+++L+ + +KLSDFGF + P G+ + +PE++ Y
Sbjct: 169 SDSILLTLDGRVKLSDFGFC-----AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV- 222
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
D+WS+G+++ M G P+ + +Q +K+++
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR 254
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 30/272 (11%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVK-VVSKVEAPPDYLKKFLPREIDVVKGLR-H 123
Y L K +G G+Y V + R G VAVK + + D + F REI ++ L H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF--REIMILTELSGH 68
Query: 124 PNLIRFLQAI--ETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF-RQLVDAIDYC 180
N++ L + + VY++ +Y E L + R + EP K++ QL+ I Y
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANIL-EPVHKQYVVYQLIKVIKYL 125
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKS----------------GHQSP 224
H G++HRD+K N+L++ E ++K++DFG +R + + P
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 225 LSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQT 284
+ + + Y +PEIL G D+WS+G +L + G+ F ++ + L+++
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 285 KVVFPTEPNV----SAECKTLLSKIFSPIKFR 312
+ FP+ +V S KT++ + ++ R
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIR 277
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 275 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 326
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 327 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 385
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 437
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 438 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 496
Query: 302 LSKIF 306
+ + +
Sbjct: 497 MCQCW 501
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V + G +A K++ +E P ++ + RE+ V+ P ++ F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKP-AIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL +++ G I E K ++ + Y E+ ++HRD+
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + G + ++++F G+ +Y SPE L+G Y+
Sbjct: 151 KPSNILVNSRGEIKLCDFGVS-GQLI------DSMANSFVGTRSYMSPERLQGTHYSVQ- 202
Query: 251 SDVWSMGVVLYAMAFGRLPF 270
SD+WSMG+ L MA GR P
Sbjct: 203 SDIWSMGLSLVEMAVGRYPI 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ V R VA+K++ EA + + + +EI V+ P + ++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ +++IIMEY GS LD ++ G +DE + R+++ +DY H +HRDIK
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
N+L+ +KL+DFG A G + + +TF G+ + +PE++K Y +
Sbjct: 132 AANVLLSEHGEVKLADFGVA-GQLTDTQIKR----NTFVGTPFWMAPEVIKQSAYDSK-A 185
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
D+WS+G+ +A G P + + +++L
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVL 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ V R VA+K++ EA + + + +EI V+ P + ++
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ +++IIMEY GS LD ++ G +DE + R+++ +DY H +HRDIK
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
N+L+ +KL+DFG A G + + +TF G+ + +PE++K Y +
Sbjct: 152 AANVLLSEHGEVKLADFGVA-GQLTDTQIKR----NTFVGTPFWMAPEVIKQSAYDSK-A 205
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
D+WS+G+ +A G P + + +++L
Sbjct: 206 DIWSLGITAIELARGEPPHSELHPMKVL 233
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 13/224 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G+Y TV A + VA+K V +++ + + REI ++K L+H N++R
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ + ++ ++ E+ ++ F G +D K + QL+ + +CH R V+HRD+K
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK 128
Query: 192 CENLLIDGEYNIKLSDFGFARGH---MKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTP 248
+NLLI+ +KL+DFG AR ++C S L Y P++L G
Sbjct: 129 PQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTL--------WYRPPDVLFGAKLYS 180
Query: 249 HYSDVWSMGVVLYAMAFGRLP-FDDTNYIQLLKQVQTKVVFPTE 291
D+WS G + +A P F + LK++ + PTE
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTE 224
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V + G +A K++ +E P + + RE+ V+ P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL +++ G I E K ++ + Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + G + ++++F G+ +Y SPE L+G Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVS-GQLI------DSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 251 SDVWSMGVVLYAMAFGRLPF--DDTNYIQLLKQVQTK 285
SD+WSMG+ L MA GR P D ++L+ Q +
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L K +G G + V + + KV K P + E +++K L+H L+
Sbjct: 17 LVKRLGAGQFGEVWMGYYNN-----STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGV 185
R + +YII EY KGSLLDF++ + G + P+ + Q+ + + Y +
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 131
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+HRD++ N+L+ K++DFG AR + G + P+ + +PE +
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK--------WTAPEAI 183
Query: 242 KGVPYTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++LY + +G++P+
Sbjct: 184 NFGCFTIK-SDVWSFGILLYEIVTYGKIPY 212
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V + G +A K++ +E P + + RE+ V+ P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL +++ G I E K ++ + Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + G + ++++F G+ +Y SPE L+G Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVS-GQLI------DSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 251 SDVWSMGVVLYAMAFGRLPF--DDTNYIQLLKQVQTK 285
SD+WSMG+ L MA GR P D ++L+ Q +
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 192 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 243
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 244 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 354
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 355 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 413
Query: 302 LSKIF 306
+ + +
Sbjct: 414 MCQCW 418
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 53/337 (15%)
Query: 9 PQSENIKTDTIAQSSKENKRPKS-SSNKL--DLDASSRSTLIAANKRDVKKKSTVMENHG 65
P S +T + A+S K ++P + S K+ D D S +T++A + + V
Sbjct: 2 PMSGRPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEV----S 57
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + K+F RE+ +++ L H N
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 110
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 163
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 164 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSY 218
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 219 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 277
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVK 325
PT + + +P + IK PW K
Sbjct: 278 PTREQI---------REMNPNYTEFKFPQIKAHPWTK 305
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V + G +A K++ +E P + + RE+ V+ P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL +++ G I E K ++ + Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + G + ++++F G+ +Y SPE L+G Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVS-GQLI------DSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 251 SDVWSMGVVLYAMAFGRLPF--DDTNYIQLLKQVQTK 285
SD+WSMG+ L MA GR P D ++L+ Q +
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V + G +A K++ +E P + + RE+ V+ P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL +++ G I E K ++ + Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + G + ++++F G+ +Y SPE L+G Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVS-GQLI------DSMANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 251 SDVWSMGVVLYAMAFGRLPF--DDTNYIQLLKQVQTK 285
SD+WSMG+ L MA GR P D ++L+ Q +
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVE 220
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 192 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 243
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 244 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 354
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 355 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 413
Query: 302 LSKIF 306
+ + +
Sbjct: 414 MCQCW 418
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 77
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI++EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 78 -LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 302 LSKIF 306
+ + +
Sbjct: 248 MCQCW 252
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 77
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+MEY KG LLDF++ E Y+ P+ Q+ + Y V
Sbjct: 78 -LYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 188
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 189 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 302 LSKIF 306
+ + +
Sbjct: 248 MCQCW 252
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 54/286 (18%)
Query: 71 VIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
V+G G++ V R+ D + K+ + L L E+ ++ L H ++R+
Sbjct: 13 VLGQGAFGQV---VKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLNHQYVVRYY 68
Query: 131 QA-------------IETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKW--FRQLVD 175
A ++ ++I EY E +L D I E +++ R + W FRQ+++
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQILE 127
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-H-----MKCKSGHQSPLSDTF 229
A+ Y H +G++HR++K N+ ID N+K+ DFG A+ H +K S + SD
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 230 ---CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF----DDTNYIQLLKQV 282
G+ Y + E+L G + D +S+G++ + + PF + N ++ L+ V
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSV 244
Query: 283 Q------------------TKVVFPTEPNVSAECKTLLSKIFSPIK 310
+++ +PN +TLL+ + P+K
Sbjct: 245 SIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 15/215 (6%)
Query: 63 NHGYVL-GKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL 121
N+ Y+L K +G G +A V+ S G + A K + K D + L EI V++
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL-HEIAVLELA 85
Query: 122 RH-PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAID 178
+ P +I + E T + +I+EYA G + E + E + +Q+++ +
Sbjct: 86 KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 179 YCHERGVVHRDIKCENLLIDGEY---NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
Y H+ +VH D+K +N+L+ Y +IK+ DFG +R K GH L + G+ Y
Sbjct: 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR-----KIGHACELREIM-GTPEY 199
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+PEIL P T +D+W++G++ Y + PF
Sbjct: 200 LAPEILNYDPITTA-TDMWNIGIIAYMLLTHTSPF 233
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 117/233 (50%), Gaps = 17/233 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A T G +VAVK +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L I E +D R Q++ I + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR C + +P + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLART--ACTNFMMTP----YVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
+ Y + D+WS+G ++ + G + F T++I +V ++ P+ ++A
Sbjct: 200 MGYAAN-VDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 251
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V + G +A K++ +E P + + RE+ V+ P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 71
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL +++ G I E K ++ + Y E+ ++HRD+
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + + ++++F G+ +Y SPE L+G Y+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDS-------MANSFVGTRSYMSPERLQGTHYSVQ- 183
Query: 251 SDVWSMGVVLYAMAFGRLPF 270
SD+WSMG+ L MA GR P
Sbjct: 184 SDIWSMGLSLVEMAVGRYPI 203
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 13/224 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G+Y TV A + VA+K V +++ + + REI ++K L+H N++R
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ + ++ ++ E+ ++ F G +D K + QL+ + +CH R V+HRD+K
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLK 128
Query: 192 CENLLIDGEYNIKLSDFGFARGH---MKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTP 248
+NLLI+ +KL++FG AR ++C S L Y P++L G
Sbjct: 129 PQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL--------WYRPPDVLFGAKLYS 180
Query: 249 HYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQTKVVFPTE 291
D+WS G + +A GR F + LK++ + PTE
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ V R VA+K++ EA + + + +EI V+ P + ++
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ +++IIMEY GS LD ++ G +DE + R+++ +DY H +HRDIK
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT------FCGSYAYASPEILKGVP 245
N+L+ +KL+DFG A L+DT F G+ + +PE++K
Sbjct: 147 AANVLLSEHGEVKLADFGVA-----------GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
Y +D+WS+G+ +A G P + + +++L
Sbjct: 196 YDSK-ADIWSLGITAIELARGEPPHSELHPMKVL 228
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVK-VVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
V G +G G + V + VAVK + + V+ + LK+ +EI V+ +H N
Sbjct: 34 VGGNKMGEGGFGVV--YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL------VDAIDY 179
L+ L + ++ Y GSLLD R +D W + + I++
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINF 148
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
HE +HRDIK N+L+D + K+SDFG AR K Q+ + G+ AY +PE
Sbjct: 149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA---QTVMXSRIVGTTAYMAPE 205
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
L+G TP SD++S GVVL + G D+ QLL
Sbjct: 206 ALRG-EITPK-SDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 77
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI++EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 78 -LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 302 LSKIF 306
+ + +
Sbjct: 248 MCQCW 252
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 192 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 243
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 244 -LYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 354
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 355 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 413
Query: 302 LSKIF 306
+ + +
Sbjct: 414 MCQCW 418
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 11/212 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V + G +A K++ +E P + + RE+ V+ P ++ F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 74
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL +++ G I E K ++ + Y E+ ++HRD+
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + G + +++ F G+ +Y SPE L+G Y+
Sbjct: 135 KPSNILVNSRGEIKLCDFGVS-GQLI------DEMANEFVGTRSYMSPERLQGTHYSVQ- 186
Query: 251 SDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
SD+WSMG+ L MA GR P +LL +
Sbjct: 187 SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYI 218
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 21/257 (8%)
Query: 70 KVIGIGSY---ATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
KVIG G++ A VK+ + R A+K+++K E E DV+ +
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERI---YAMKILNKWEMLKRAETACFREERDVLVNGDCQWI 152
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGV 185
A + + +Y++M+Y G LL + + E + E + + ++V AID H+
Sbjct: 153 TALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY 212
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDIK +N+L+D +I+L+DFG M QS ++ G+ Y SPEIL+ +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCL-KMNDDGTVQSSVA---VGTPDYISPEILQAME 268
Query: 246 -----YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTE-PNVSA 296
Y P D WS+GV +Y M +G PF + ++ ++ + + FP+ +VS
Sbjct: 269 DGMGKYGPE-CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 327
Query: 297 ECKTLLSKIFSPIKFRI 313
E K L+ ++ + R+
Sbjct: 328 EAKDLIQRLICSRERRL 344
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 23 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 74
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 75 -LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI-- 191
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 192 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 244
Query: 302 LSKIF 306
+ + +
Sbjct: 245 MCQCW 249
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVK-VVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
V G +G G + V + VAVK + + V+ + LK+ +EI V+ +H N
Sbjct: 34 VGGNKMGEGGFGVV--YKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL------VDAIDY 179
L+ L + ++ Y GSLLD R +D W + + I++
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINF 148
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
HE +HRDIK N+L+D + K+SDFG AR K Q+ + G+ AY +PE
Sbjct: 149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA---QTVMXXRIVGTTAYMAPE 205
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
L+G TP SD++S GVVL + G D+ QLL
Sbjct: 206 ALRG-EITPK-SDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 21/257 (8%)
Query: 70 KVIGIGSY---ATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
KVIG G++ A VK+ + R A+K+++K E E DV+ +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERI---YAMKILNKWEMLKRAETACFREERDVLVNGDCQWI 136
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGV 185
A + + +Y++M+Y G LL + + E + E + + ++V AID H+
Sbjct: 137 TALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY 196
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDIK +N+L+D +I+L+DFG M QS ++ G+ Y SPEIL+ +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCL-KMNDDGTVQSSVA---VGTPDYISPEILQAME 252
Query: 246 -----YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV---QTKVVFPTE-PNVSA 296
Y P D WS+GV +Y M +G PF + ++ ++ + + FP+ +VS
Sbjct: 253 DGMGKYGPE-CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSE 311
Query: 297 ECKTLLSKIFSPIKFRI 313
E K L+ ++ + R+
Sbjct: 312 EAKDLIQRLICSRERRL 328
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 29 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 82
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK--------WTAPEAINYGT 194
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 195 FTIK-SDVWSFGILLTEIVTHGRIPY 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 27 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 80
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK--------WTAPEAINYGT 192
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 193 FTIK-SDVWSFGILLTEIVTHGRIPY 217
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 22 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 75
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK--------WTAPEAINYGT 187
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 188 FTIK-SDVWSFGILLTEIVTHGRIPY 212
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 26 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 79
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK--------WTAPEAINYGT 191
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 192 FTIK-SDVWSFGILLTEIVTHGRIPY 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 27 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 80
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK--------WTAPEAINYGT 192
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 193 FTIK-SDVWSFGILLTEIVTHGRIPY 217
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 21 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 74
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK--------WTAPEAINYGT 186
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 187 FTIK-SDVWSFGILLTEIVTHGRIPY 211
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 12/212 (5%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKK-----FLPREIDVVKG 120
+ L KV+G G+Y V L G D KV ++K E V++
Sbjct: 56 FELLKVLGTGAYGKVFLVRKIS-GHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 121 LRH-PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
+R P L+ A +T ++++I++Y G L + + E + + ++V A+++
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
H+ G+++RDIK EN+L+D ++ L+DFG ++ + ++ + FCG+ Y +P+
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV----ADETERAYDFCGTIEYMAPD 230
Query: 240 ILKGVPYTPHYS-DVWSMGVVLYAMAFGRLPF 270
I++G + D WS+GV++Y + G PF
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 23 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 74
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 75 -LYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI-- 191
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 192 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 244
Query: 302 LSKIF 306
+ + +
Sbjct: 245 MCQCW 249
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 23 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 76
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK--------WTAPEAINYGT 188
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 189 FTIK-SDVWSFGILLTEIVTHGRIPY 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ V R VA+K++ EA + + + +EI V+ P + ++
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ +++IIMEY GS LD ++ G +DE + R+++ +DY H +HRDIK
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT------FCGSYAYASPEILKGVP 245
N+L+ +KL+DFG A L+DT F G+ + +PE++K
Sbjct: 132 AANVLLSEHGEVKLADFGVA-----------GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
Y +D+WS+G+ +A G P + + +++L
Sbjct: 181 YDSK-ADIWSLGITAIELARGEPPHSELHPMKVL 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 21 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 74
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK--------WTAPEAINYGT 186
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 187 FTIK-SDVWSFGILLTEIVTHGRIPY 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 21 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 74
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK--------WTAPEAINYGT 186
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 187 FTIK-SDVWSFGILLTEIVTHGRIPY 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 16 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 69
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK--------WTAPEAINYGT 181
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 182 FTIK-SDVWSFGILLTEIVTHGRIPY 206
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 19 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 70
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 71 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 129
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI-- 187
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 188 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 240
Query: 302 LSKIF 306
+ + +
Sbjct: 241 MCQCW 245
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 30 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 83
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK--------WTAPEAINYGT 195
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 196 FTIK-SDVWSFGILLTEIVTHGRIPY 220
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 77
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 78 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 188
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 189 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 302 LSKIF 306
+ + +
Sbjct: 248 MCQCW 252
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 31 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 84
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK--------WTAPEAINYGT 196
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 197 FTIK-SDVWSFGILLTEIVTHGRIPY 221
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 77
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 78 -LYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 188
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 189 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 302 LSKIF 306
+ + +
Sbjct: 248 MCQCW 252
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 193 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGNMSPE---AFL-QEAQVMKKLRHEKLVQ 244
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 245 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 303
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG R + G + P+ + +PE
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK--------WTAPEAAL 355
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 356 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 414
Query: 302 LSKIF 306
+ + +
Sbjct: 415 MCQCW 419
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 15 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 66
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 67 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 125
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI-- 183
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 184 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 236
Query: 302 LSKIF 306
+ + +
Sbjct: 237 MCQCW 241
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 21/214 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ V VA+K++ EA + + + +EI V+ P + R+
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ + +++IIMEY GS LD + + G ++E R+++ +DY H +HRDIK
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT------FCGSYAYASPEILKGVP 245
N+L+ + ++KL+DFG A L+DT F G+ + +PE++K
Sbjct: 144 AANVLLSEQGDVKLADFGVA-----------GQLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
Y +D+WS+G+ +A G P D + +++L
Sbjct: 193 YD-FKADIWSLGITAIELAKGEPPNSDLHPMRVL 225
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 17 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 68
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 69 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 127
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI-- 185
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 186 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 238
Query: 302 LSKIF 306
+ + +
Sbjct: 239 MCQCW 243
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 15 KTDTIAQSSKENKRPKS-SSNKL--DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKV 71
+T + A+S K ++P + S K+ D D S +T++A + + V Y KV
Sbjct: 6 RTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEV----SYTDTKV 61
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR--- 128
IG GS+ V A G VA+K V + K+F RE+ +++ L H N++R
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 114
Query: 129 -FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKWFRQLVD 175
F + E VY+ + +LD++ Y + K + QL
Sbjct: 115 FFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P C Y
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSXICSRY- 221
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y +PE++ G DVWS G VL + G+ F + + L ++ + PT +
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 295 SAECKTLLSKIFSPIKFRIRLKDIKQDPWVK 325
+ +P + IK PW K
Sbjct: 282 ---------REMNPNYTEFKFPQIKAHPWTK 303
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
+ IG GS+ V + A+K ++K + + + +E+ +++GL HP L+
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ + ++++++ G L +Q+ + E K + +LV A+DY + ++HRD
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRD 140
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL---KGVPY 246
+K +N+L+D ++ ++DF A ++ ++ T G+ Y +PE+ KG Y
Sbjct: 141 MKPDNILLDEHGHVHITDFNIA-----AMLPRETQIT-TMAGTKPYMAPEMFSSRKGAGY 194
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPF---DDTNYIQLLKQVQTKVVFPTEPNV-SAECKTLL 302
+ D WS+GV Y + GR P+ T+ +++ +T VV T P+ S E +LL
Sbjct: 195 S-FAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV--TYPSAWSQEMVSLL 251
Query: 303 SKIFSP 308
K+ P
Sbjct: 252 KKLLEP 257
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 17/225 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVE----APPDYLKKFLPREIDVVKGLRHPNLI 127
+G G+YATV S VA+K + ++E AP + RE+ ++K L+H N++
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEI-RLEHEEGAPCTAI-----REVSLLKDLKHANIV 63
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREG-YIDEPRTKKWFRQLVDAIDYCHERGVV 186
I T + ++ EY +K L ++ G I+ K + QL+ + YCH + V+
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K +NLLI+ +KL+DFG AR + D + Y P+IL G
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARA-----KSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTE 291
D+W +G + Y MA GR F + + L + + PTE
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTE 222
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 102/220 (46%), Gaps = 17/220 (7%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVK-VVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
V G +G G + V + VAVK + + V+ + LK+ +EI V+ +H N
Sbjct: 28 VGGNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 85
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQL------VDAIDY 179
L+ L + ++ Y GSLLD R +D W + + I++
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLD---RLSCLDGTPPLSWHMRCKIAQGAANGINF 142
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
HE +HRDIK N+L+D + K+SDFG AR K Q + G+ AY +PE
Sbjct: 143 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA---QXVMXXRIVGTTAYMAPE 199
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
L+G TP SD++S GVVL + G D+ QLL
Sbjct: 200 ALRG-EITPK-SDIYSFGVVLLEIITGLPAVDEHREPQLL 237
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 9/208 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ V R VA+K++ EA + + + +EI V+ + ++
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
+ +++IIMEY GS LD + R G DE + ++++ +DY H +HRDIK
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
N+L+ + ++KL+DFG A G + + +TF G+ + +PE+++ Y +
Sbjct: 148 AANVLLSEQGDVKLADFGVA-GQLTDTQIKR----NTFVGTPFWMAPEVIQQSAYDSK-A 201
Query: 252 DVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
D+WS+G+ +A G P D + +++L
Sbjct: 202 DIWSLGITAIELAKGEPPNSDMHPMRVL 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 15 KTDTIAQSSKENKRPKS-SSNKL--DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKV 71
+T + A+S K ++P + S K+ D D S +T++A + + V Y KV
Sbjct: 6 RTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEV----SYTDTKV 61
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR--- 128
IG GS+ V A G VA+K V + K+F RE+ +++ L H N++R
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 114
Query: 129 -FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKWFRQLVD 175
F + E VY+ + +LD++ Y + K + QL
Sbjct: 115 FFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P C Y
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSYICSRY- 221
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y +PE++ G DVWS G VL + G+ F + + L ++ + PT +
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 295 SAECKTLLSKIFSPIKFRIRLKDIKQDPWVK 325
+ +P + IK PW K
Sbjct: 282 ---------REMNPNYTEFKFPQIKAHPWTK 303
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 15 KTDTIAQSSKENKRPKS-SSNKL--DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKV 71
+T + A+S K ++P + S K+ D D S +T++A + + V Y KV
Sbjct: 10 RTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEV----SYTDTKV 65
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR--- 128
IG GS+ V A G VA+K V + K+F RE+ +++ L H N++R
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 118
Query: 129 -FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKWFRQLVD 175
F + E VY+ + +LD++ Y + K + QL
Sbjct: 119 FFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P C Y
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSYICSRY- 225
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y +PE++ G DVWS G VL + G+ F + + L ++ + PT +
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 285
Query: 295 SAECKTLLSKIFSPIKFRIRLKDIKQDPWVK 325
+ +P + IK PW K
Sbjct: 286 ---------REMNPNYTEFKFPQIKAHPWTK 307
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 15 KTDTIAQSSKENKRPKS-SSNKL--DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKV 71
+T + A+S K ++P + S K+ D D S +T++A + + V Y KV
Sbjct: 51 RTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEV----SYTDTKV 106
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR--- 128
IG GS+ V A G VA+K V + K+F RE+ +++ L H N++R
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 159
Query: 129 -FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKWFRQLVD 175
F + E VY+ + +LD++ Y + K + QL
Sbjct: 160 FFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P C Y
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSYICSRY- 266
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNV 294
Y +PE++ G DVWS G VL + G+ F + + L ++ + PT +
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 326
Query: 295 SAECKTLLSKIFSPIKFRIRLKDIKQDPWVK 325
+ +P + IK PW K
Sbjct: 327 ---------REMNPNYTEFKFPQIKAHPWTK 348
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K +RH L++
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKIRHEKLVQ 77
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 78 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI-- 194
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 195 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 302 LSKIF 306
+ + +
Sbjct: 248 MCQCW 252
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+Y V A ++ G VA+K + +++A + + REI ++K L HPN++ +
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
I + + ++ E+ EK + + + + + K + QL+ + +CH+ ++HRD+K
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+NLLI+ + +KL+DFG AR + + + Y +P++L G
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGSKKYSTSV 201
Query: 252 DVWSMGVVLYAMAFGRLPF 270
D+WS+G + M G+ F
Sbjct: 202 DIWSIGCIFAEMITGKPLF 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 77
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 78 -LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD+ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 188
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 189 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 302 LSKIF 306
+ + +
Sbjct: 248 MCQCW 252
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L K +G G + V + + KV K P + E +++K L+H L+
Sbjct: 16 LVKKLGAGQFGEVWMGYYNN-----STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLV 70
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGV 185
R + +YII E+ KGSLLDF++ + G + P+ + Q+ + + Y +
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 130
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+HRD++ N+L+ K++DFG AR + G + P+ + +PE +
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK--------WTAPEAI 182
Query: 242 KGVPYTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T S+VWS G++LY + +G++P+
Sbjct: 183 NFGCFTIK-SNVWSFGILLYEIVTYGKIPY 211
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 9/237 (3%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + + IG G+Y V A G VA+K + K+ L RE+ ++K +H N
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDN 114
Query: 126 LIRFLQAIETT------HRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
+I + T VY++++ E L I + + + QL+ + Y
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
H V+HRD+K NLL++ +K+ DFG ARG + HQ +++ + + Y +PE
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE-YVATRWYRAPE 232
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
++ + D+WS+G + M R F NY+ L+ + + P+ + A
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+Y V A ++ G VA+K + +++A + + REI ++K L HPN++ +
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
I + + ++ E+ EK + + + + + K + QL+ + +CH+ ++HRD+K
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLK 146
Query: 192 CENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYS 251
+NLLI+ + +KL+DFG AR + + + Y +P++L G
Sbjct: 147 PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW-----YRAPDVLMGSKKYSTSV 201
Query: 252 DVWSMGVVLYAMAFGRLPF 270
D+WS+G + M G+ F
Sbjct: 202 DIWSIGCIFAEMITGKPLF 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A T G +VAVK +S+ + K+ RE+ ++K + H N+I
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISL 86
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L I E +D R Q++ I + H
Sbjct: 87 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHME--LDHERMSYLLYQMLCGIKHLHSA 143
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + + + + + Y +PE++ G
Sbjct: 144 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TASTNFMMTPYVVTRYYRAPEVILG 197
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
+ Y + D+WS+G ++ + G + F T++I +V ++ P+ ++A
Sbjct: 198 MGYKEN-VDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 249
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 26 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 77
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQRE--GYIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + +YI+ EY KG LLDF++ E Y+ P+ Q+ + Y V
Sbjct: 78 -LYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ + +PE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK--------WTAPEAAL 188
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 189 YGRFTIK-SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 247
Query: 302 LSKIF 306
+ + +
Sbjct: 248 MCQCW 252
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L + IG G + V L G VAVK + +L E V+ LRH NL+
Sbjct: 16 LLQTIGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLV 68
Query: 128 RFLQAI-ETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERG 184
+ L I E +YI+ EY KGSL+D+++ G + K+ + +A++Y
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 128
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
VHRD+ N+L+ + K+SDFG + S DT + +PE L+
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREA 180
Query: 245 PYTPHYSDVWSMGVVLYAM-AFGRLPF 270
++ SDVWS G++L+ + +FGR+P+
Sbjct: 181 AFSTK-SDVWSFGILLWEIYSFGRVPY 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G + V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 17 LGAGQFGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 70
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HR+
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK--------WTAPEAINYGT 182
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 183 FTIK-SDVWSFGILLTEIVTHGRIPY 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G V + H VAVK + + PD FL E +++K L+H L+R L
Sbjct: 21 LGAGQAGEVWMGYYNGH-TKVAVKSLKQGSMSPD---AFLA-EANLMKQLQHQRLVR-LY 74
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTK--KWFRQLVDAIDYCHERGVVHRD 189
A+ T +YII EY E GSL+DF++ I K Q+ + + + ER +HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
++ N+L+ + K++DFG AR + G + P+ + +PE +
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK--------WTAPEAINYGT 186
Query: 246 YTPHYSDVWSMGVVLYAMA-FGRLPF 270
+T SDVWS G++L + GR+P+
Sbjct: 187 FTIK-SDVWSFGILLTEIVTHGRIPY 211
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 142/330 (43%), Gaps = 53/330 (16%)
Query: 16 TDTIAQSSKENKRPKS-SSNKL--DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKVI 72
T + A+S K ++P + S K+ D D S +T++A + + V Y KVI
Sbjct: 1 TTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEV----SYTDTKVI 56
Query: 73 GIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR---- 128
G GS+ V A G VA+K V + K+F RE+ +++ L H N++R
Sbjct: 57 GNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKWFRQLVDA 176
F + E VY+ + +LD++ Y + K + QL +
Sbjct: 110 FYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 177 IDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAY 235
+ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P C Y Y
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSYICSRY-Y 216
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
+PE++ G DVWS G VL + G+ F + + L ++ + PT +
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 275
Query: 296 AECKTLLSKIFSPIKFRIRLKDIKQDPWVK 325
+ +P + IK PW K
Sbjct: 276 --------REMNPNYTEFKFPQIKAHPWTK 297
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 9/237 (3%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + + IG G+Y V A G VA+K + K+ L RE+ ++K +H N
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDN 115
Query: 126 LIRFLQAIETT------HRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
+I + T VY++++ E L I + + + QL+ + Y
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
H V+HRD+K NLL++ +K+ DFG ARG + HQ +++ + + Y +PE
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTE-YVATRWYRAPE 233
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
++ + D+WS+G + M R F NY+ L+ + + P+ + A
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 290
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 18/222 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G GSY +V A G VA+K V P + + + +EI +++ P+++++
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV-----PVESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDI 190
+ ++I+MEY GS+ D I+ R + E + + ++Y H +HRDI
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDI 151
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ E + KL+DFG A G + + + G+ + +PE+++ + Y
Sbjct: 152 KAGNILLNTEGHAKLADFGVA-GQLTDXMAKR----NXVIGTPFWMAPEVIQEIGYN-CV 205
Query: 251 SDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+D+WS+G+ MA G+ P+ D + ++ + + PT P
Sbjct: 206 ADIWSLGITAIEMAEGKPPYADIHPMRAI------FMIPTNP 241
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 17/227 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ Y + D+WS+GV++ M G + F T++I +V ++ P+
Sbjct: 200 MGYKEN-VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L + IG G + V L G VAVK + +L E V+ LRH NL+
Sbjct: 10 LLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLV 62
Query: 128 RFLQAI-ETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERG 184
+ L I E +YI+ EY KGSL+D+++ G + K+ + +A++Y
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 122
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
VHRD+ N+L+ + K+SDFG + S DT + +PE L+
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREK 174
Query: 245 PYTPHYSDVWSMGVVLYAM-AFGRLPF 270
++ SDVWS G++L+ + +FGR+P+
Sbjct: 175 KFSTK-SDVWSFGILLWEIYSFGRVPY 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L + IG G + V L G VAVK + +L E V+ LRH NL+
Sbjct: 25 LLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLV 77
Query: 128 RFLQAI-ETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERG 184
+ L I E +YI+ EY KGSL+D+++ G + K+ + +A++Y
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
VHRD+ N+L+ + K+SDFG + S DT + +PE L+
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREK 189
Query: 245 PYTPHYSDVWSMGVVLYAM-AFGRLPF 270
++ SDVWS G++L+ + +FGR+P+
Sbjct: 190 KFSTK-SDVWSFGILLWEIYSFGRVPY 215
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 92 VAVK-VVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGS 150
VAVK + + V+ + LK+ +EI V +H NL+ L + ++ Y GS
Sbjct: 48 VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGS 107
Query: 151 LLDFIQREGYIDEPRTKKWFRQL------VDAIDYCHERGVVHRDIKCENLLIDGEYNIK 204
LLD R +D W + + I++ HE +HRDIK N+L+D + K
Sbjct: 108 LLD---RLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAK 164
Query: 205 LSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA 264
+SDFG AR K Q G+ AY +PE L+G TP SD++S GVVL +
Sbjct: 165 ISDFGLARASEKFA---QXVXXSRIVGTTAYXAPEALRG-EITPK-SDIYSFGVVLLEII 219
Query: 265 FGRLPFDDTNYIQLL 279
G D+ QLL
Sbjct: 220 TGLPAVDEHREPQLL 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 28/245 (11%)
Query: 72 IGIGSYATVKLAT---STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
+G G + V + T +TR VA+K + P+ FL +E V+K LRH L++
Sbjct: 16 LGQGCFGEVWMGTWNGTTR----VAIKTLKPGTMSPE---AFL-QEAQVMKKLRHEKLVQ 67
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERGVV 186
L A+ + + I+ EY KGSLLDF++ E Y+ P+ Q+ + Y V
Sbjct: 68 -LYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI-- 184
Query: 243 GVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
SDVWS G++L + GR+P+ ++L QV+ P P L
Sbjct: 185 -------KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL 237
Query: 302 LSKIF 306
+ + +
Sbjct: 238 MCQCW 242
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 17/227 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ Y + D+WS+GV++ M G + F T++I +V ++ P+
Sbjct: 200 MGYKEN-VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L + IG G + V L G VAVK + +L E V+ LRH NL+
Sbjct: 197 LLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLV 249
Query: 128 RFLQAI-ETTHRVYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAIDYCHERG 184
+ L I E +YI+ EY KGSL+D+++ G + K+ + +A++Y
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
VHRD+ N+L+ + K+SDFG + S DT + +PE L+
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREK 361
Query: 245 PYTPHYSDVWSMGVVLYAM-AFGRLPF 270
++ SDVWS G++L+ + +FGR+P+
Sbjct: 362 KFSTK-SDVWSFGILLWEIYSFGRVPY 387
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
IG G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 28/240 (11%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSK-----VEAPPDYLKKFLPREIDVVKGLRHPNL 126
+G G+Y +V A R VAVK +S+ + A Y RE+ ++K L+H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY------RELRLLKHLKHENV 89
Query: 127 IRFLQ------AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
I L +IE VY++ G+ L+ I + + + + QL+ + Y
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H G++HRD+K N+ ++ + +++ DFG AR + +G + + Y +PEI
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG--------YVATRWYRAPEI 199
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT 300
+ + D+WS+G ++ + G+ F ++YI LK++ V P+ P V A+ +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS-PEVLAKISS 258
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +SK + K+ RE+ ++K ++H N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 17/226 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 32 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 90
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 147
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + F + Y +PE++ G
Sbjct: 148 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMVPFVVTRYYRAPEVILG 201
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ Y + D+WS+G ++ M G + F T++I +V ++ P
Sbjct: 202 MGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 246
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + + Y +PEI+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNAM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 317
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 318 HPYINVWYDPA 328
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + + Y +PEI+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + + Y +PEI+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTADEMTGYVATRWYRAPEIMLNWM 205
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L K +G G + VKL + DVAVK++ + D +F +E + L HP L+
Sbjct: 12 LLKELGSGQFGVVKLG-KWKGQYDVAVKMIKEGSMSED---EFF-QEAQTMMKLSHPKLV 66
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEP-RTKKWFRQLVDAIDYCHERGVV 186
+F + +YI+ EY G LL++++ G EP + + + + + + +
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI 126
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA------YASPEI 240
HRD+ N L+D + +K+SDFG R L D + S +++PE+
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTR----------YVLDDQYVSSVGTKFPVKWSAPEV 176
Query: 241 LKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFD 271
Y+ SDVW+ G++++ + G++P+D
Sbjct: 177 FHYFKYSSK-SDVWAFGILMWEVFSLGKMPYD 207
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 157
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ Y + D+WS+G ++ M G + F T++I +V ++ P+
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 317
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 318 HPYINVWYDPA 328
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H F + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 99
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 157
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 209
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H F + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 100
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 158
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 210
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 19/238 (7%)
Query: 51 KRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF 110
K+DV K + + YV +G G+Y +V A R G VA+K +S+ + K+
Sbjct: 30 KQDVNKTAWELPK-TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA 88
Query: 111 LPREIDVVKGLRHPNLIRFL------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEP 164
RE+ ++K ++H N+I L ++ + Y++M + + L + E E
Sbjct: 89 Y-RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGME--FSEE 144
Query: 165 RTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSP 224
+ + Q++ + Y H GVVHRD+K NL ++ + +K+ DFG AR H
Sbjct: 145 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--------HADA 196
Query: 225 LSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
+ + Y +PE++ + D+WS+G ++ M G+ F +Y+ L Q+
Sbjct: 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 169
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGYVATRWYRAPEIMLNWM 221
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG AR G + P+ + S
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 183
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 238 MGYKENV-DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 355
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 356 HPYINVWYDPA 366
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 51 KRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF 110
K+DV K + + YV +G G+Y +V A R G VA+K +S+ + K+
Sbjct: 12 KQDVNKTAWELPK-TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA 70
Query: 111 LPREIDVVKGLRHPNLIRFL------QAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDE 163
RE+ ++K ++H N+I L ++ + Y++M + + D + G E
Sbjct: 71 Y-RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT----DLQKIMGLKFSE 125
Query: 164 PRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQS 223
+ + Q++ + Y H GVVHRD+K NL ++ + +K+ DFG AR H
Sbjct: 126 EKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--------HAD 177
Query: 224 PLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
+ + Y +PE++ + D+WS+G ++ M G+ F +Y+ L Q+
Sbjct: 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 90
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 148
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 200
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME--LDHERMSYLLYQMLXGIKHLHSA 138
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 139 GIIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 193 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 310
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 311 HPYINVWYDPA 321
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 95
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 153
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 205
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 317
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 318 HPYINVWYDPA 328
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H F + Y +PEI+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVATRWYRAPEIMLNWM 194
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 111
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 169
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 221
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 165
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ Y + D+WS+G ++ M G + F T++I +V ++ P+
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 87
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 88 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 145
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 197
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 241
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG R H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 17/226 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 89
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 146
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ Y + D+WS+G ++ M G + F T++I +V ++ P
Sbjct: 201 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ Y + D+WS+G ++ M G + F T++I +V ++ P+
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 17/226 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ Y + D+WS+G ++ M G + F T++I +V ++ P
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 143
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+Y V A T VA+K + ++E + + RE+ ++K L+H N+I
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
I HR+++I EYAE L ++ + + K + QL++ +++CH R +HRD+K
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK 159
Query: 192 CENLLI---DGEYN--IKLSDFGFAR--GHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
+NLL+ D +K+ DFG AR G + H+ + Y PEIL G
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE-------IITLWYRPPEILLG- 211
Query: 245 PYTPHYS---DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP---TEPNVSA 296
+ HYS D+WS+ + M F + I L ++ + P T P V+A
Sbjct: 212 --SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA 267
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 93
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ Y + D+WS+G ++ M G + F T++I +V ++ P+
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 85
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 143
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 195
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 86
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 87 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 144
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 196
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 50/306 (16%)
Query: 37 DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKV 96
D D S +T++A + + V Y KVIG GS+ V A G VA+K
Sbjct: 9 DKDGSKVTTVVATPGQGPDRPQEV----SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 64
Query: 97 VSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR----FLQAIETTHRVYIIMEYAEKGSLL 152
V + K+F RE+ +++ L H N++R F + E VY+ + +L
Sbjct: 65 VLQD-------KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL-------VL 110
Query: 153 DFIQREGY------------IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGE 200
D++ Y + K + QL ++ Y H G+ HRDIK +NLL+D +
Sbjct: 111 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 170
Query: 201 YNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVV 259
+ KL DFG A+ ++ + P C Y Y +PE++ G DVWS G V
Sbjct: 171 TAVLKLCDFGSAKQLVRGE-----PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCV 224
Query: 260 LYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIK 319
L + G+ F + + L ++ + PT + + +P + IK
Sbjct: 225 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI---------REMNPNYTEFKFPQIK 275
Query: 320 QDPWVK 325
PW K
Sbjct: 276 AHPWTK 281
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 28/240 (11%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSK-----VEAPPDYLKKFLPREIDVVKGLRHPNL 126
+G G+Y +V A R VAVK +S+ + A Y RE+ ++K L+H N+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY------RELRLLKHLKHENV 89
Query: 127 IRFLQ------AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
I L +IE VY++ G+ L+ I + + + + QL+ + Y
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H G++HRD+K N+ ++ + +++ DFG AR + +G + + Y +PEI
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTG--------YVATRWYRAPEI 199
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT 300
+ + D+WS+G ++ + G+ F ++YI LK++ V P+ P V A+ +
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS-PEVLAKISS 258
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 23/275 (8%)
Query: 54 VKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKK---- 109
V+ K ++ + + KVIG G+++ V + + G A+K+++K D LK+
Sbjct: 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW----DMLKRGEVS 106
Query: 110 FLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREG-YIDEPRTKK 168
E DV+ + + A + + +Y++MEY G LL + + G I +
Sbjct: 107 CFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARF 166
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT 228
+ ++V AID H G VHRDIK +N+L+D +I+L+DFG +K ++ + S
Sbjct: 167 YLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSC---LKLRA-DGTVRSLV 222
Query: 229 FCGSYAYASPEILKGVPYTPHY------SDVWSMGVVLYAMAFGRLPF--DDT--NYIQL 278
G+ Y SPEIL+ V P D W++GV Y M +G+ PF D T Y ++
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
Query: 279 LKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRI 313
+ + + + V E + + ++ P + R+
Sbjct: 283 VHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRL 317
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 17/227 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDATLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ Y + D+WS+G ++ M G + F T++I +V ++ P+
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 77
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 189
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 190 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 248
Query: 297 ECKTLL 302
L+
Sbjct: 249 ALYQLM 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 50/306 (16%)
Query: 37 DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKV 96
D D S +T++A + + V Y KVIG GS+ V A G VA+K
Sbjct: 5 DKDGSKVTTVVATPGQGPDRPQEV----SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 60
Query: 97 VSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR----FLQAIETTHRVYIIMEYAEKGSLL 152
V + K+F RE+ +++ L H N++R F + E VY+ + +L
Sbjct: 61 VLQD-------KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL-------VL 106
Query: 153 DFIQREGY------------IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGE 200
D++ Y + K + QL ++ Y H G+ HRDIK +NLL+D +
Sbjct: 107 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 166
Query: 201 YNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVV 259
+ KL DFG A+ ++ + P C Y Y +PE++ G DVWS G V
Sbjct: 167 TAVLKLCDFGSAKQLVRGE-----PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCV 220
Query: 260 LYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIK 319
L + G+ F + + L ++ + PT + + +P + IK
Sbjct: 221 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI---------REMNPNYTEFKFPQIK 271
Query: 320 QDPWVK 325
PW K
Sbjct: 272 AHPWTK 277
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 126
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 183
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 238 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 355
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 356 HPYINVWYDPA 366
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 50/306 (16%)
Query: 37 DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKV 96
D D S +T++A + + V Y KVIG GS+ V A G VA+K
Sbjct: 9 DKDGSKVTTVVATPGQGPDRPQEV----SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 64
Query: 97 VSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR----FLQAIETTHRVYIIMEYAEKGSLL 152
V + K+F RE+ +++ L H N++R F + E VY+ + +L
Sbjct: 65 VLQD-------KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL-------VL 110
Query: 153 DFIQREGY------------IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGE 200
D++ Y + K + QL ++ Y H G+ HRDIK +NLL+D +
Sbjct: 111 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 170
Query: 201 YNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVV 259
+ KL DFG A+ ++ + P C Y Y +PE++ G DVWS G V
Sbjct: 171 TAVLKLCDFGSAKQLVRGE-----PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCV 224
Query: 260 LYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIK 319
L + G+ F + + L ++ + PT + + +P + IK
Sbjct: 225 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI---------REMNPNYTEFKFPQIK 275
Query: 320 QDPWVK 325
PW K
Sbjct: 276 AHPWTK 281
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 17/226 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR +G ++ Y Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMTPEVVTRY-YRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ Y + D+WS+G ++ M G + F T++I +V ++ P
Sbjct: 200 MGYKENV-DIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 28/240 (11%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSK-----VEAPPDYLKKFLPREIDVVKGLRHPNL 126
+G G+Y +V A R VAVK +S+ + A Y RE+ ++K L+H N+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY------RELRLLKHLKHENV 81
Query: 127 IRFLQ------AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
I L +IE VY++ G+ L+ I + + + + QL+ + Y
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H G++HRD+K N+ ++ + +++ DFG AR + +G + + Y +PEI
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTG--------YVATRWYRAPEI 191
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT 300
+ + D+WS+G ++ + G+ F ++YI LK++ V P+ P V A+ +
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS-PEVLAKISS 250
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 107
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 165
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 217
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 50/306 (16%)
Query: 37 DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKV 96
D D S +T++A + + V Y KVIG GS+ V A G VA+K
Sbjct: 16 DKDGSKVTTVVATPGQGPDRPQEV----SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 71
Query: 97 VSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR----FLQAIETTHRVYIIMEYAEKGSLL 152
V + K+F RE+ +++ L H N++R F + E VY+ + +L
Sbjct: 72 VLQD-------KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL-------VL 117
Query: 153 DFIQREGY------------IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGE 200
D++ Y + K + QL ++ Y H G+ HRDIK +NLL+D +
Sbjct: 118 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 177
Query: 201 YNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVV 259
+ KL DFG A+ ++ + P C Y Y +PE++ G DVWS G V
Sbjct: 178 TAVLKLCDFGSAKQLVRGE-----PNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCV 231
Query: 260 LYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIK 319
L + G+ F + + L ++ + PT + + +P + IK
Sbjct: 232 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI---------REMNPNYTEFKFPQIK 282
Query: 320 QDPWVK 325
PW K
Sbjct: 283 AHPWTK 288
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 218
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 87
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 144
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 145 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 198
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 199 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 257
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 258 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 316
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 317 HPYINVWYDPA 327
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 37 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 94
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 206
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 207 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 265
Query: 297 ECKTLL 302
L+
Sbjct: 266 ALYQLM 271
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 98
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 99 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 156
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 208
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 252
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 94
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 152
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 204
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 146
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 201 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 318
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 319 HPYINVWYDPA 329
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 89
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 146
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 147 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 201 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 318
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 319 HPYINVWYDPA 329
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 317
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 318 HPYINVWYDPA 328
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 50/306 (16%)
Query: 37 DLDASSRSTLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKV 96
D D S +T++A + + V Y KVIG GS+ V A G VA+K
Sbjct: 10 DKDGSKVTTVVATPGQGPDRPQEV----SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 65
Query: 97 VSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR----FLQAIETTHRVYIIMEYAEKGSLL 152
V + K+F RE+ +++ L H N++R F + E VY+ + +L
Sbjct: 66 VLQD-------KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL-------VL 111
Query: 153 DFIQREGY------------IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGE 200
D++ Y + K + QL ++ Y H G+ HRDIK +NLL+D +
Sbjct: 112 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 171
Query: 201 YNI-KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVV 259
+ KL DFG A+ ++ + P C Y Y +PE++ G DVWS G V
Sbjct: 172 TAVLKLCDFGSAKQLVRGE-----PNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCV 225
Query: 260 LYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIK 319
L + G+ F + + L ++ + PT + + +P + IK
Sbjct: 226 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI---------REMNPNYTEFKFPQIK 276
Query: 320 QDPWVK 325
PW K
Sbjct: 277 AHPWTK 282
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 317
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 318 HPYINVWYDPA 328
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 17/213 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDXTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI 276
+ Y + D+WS+G ++ M ++ F +YI
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYI 231
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 47 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 104
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 216
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 217 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 275
Query: 297 ECKTLL 302
L+
Sbjct: 276 ALYQLM 281
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L K +G G + V + T + VA+K + P+ FL E ++K L+H L+
Sbjct: 13 LIKRLGNGQFGEVWMGTWNGN-TKVAIKTLKPGTMSPE---SFL-EEAQIMKKLKHDKLV 67
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EG-YIDEPRTKKWFRQLVDAIDYCHERGV 185
+ L A+ + +YI+ EY KGSLLDF++ EG + P Q+ + Y
Sbjct: 68 Q-LYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 126
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+HRD++ N+L+ K++DFG AR + G + P+ T + Y I
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI- 185
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFP 289
SDVWS G++L + GR+P+ N ++L+QV+ P
Sbjct: 186 --------KSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 84
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 142
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ EY E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG R G + P+ + S
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 139
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 194 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 311
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 312 HPYINVWYDPA 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 82
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 139
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 194 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 311
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 312 HPYINVWYDPA 322
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 74
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI-------FWYA-P 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 187 ESLTESKFSVA-SDVWSFGVVLYEL 210
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ D+G AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISL 81
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L + +E VY++ME + +L IQ E +D R Q++ I + H
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 138
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 139 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYI---------------QLLKQVQTKV-- 286
+ Y + D+WS+G ++ M ++ F +YI + +K++Q V
Sbjct: 193 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 287 --------------------VFPTEPN----VSAECKTLLSK--IFSPIKFRIRLKDIKQ 320
+FP + +++ + LLSK + P K RI + D Q
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK-RISVDDALQ 310
Query: 321 DPWVKTEANPA 331
P++ +PA
Sbjct: 311 HPYINVWYDPA 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 17/226 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 35 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 93
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 150
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 151 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 204
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ Y + D+WS+G ++ M ++ F +YI +V ++ P
Sbjct: 205 MGYKEN-VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 249
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 17/226 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 24 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 82
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 139
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR + S + + + Y +PE++ G
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ Y + D+WS+G ++ M ++ F +YI +V ++ P
Sbjct: 194 MGYKEN-VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 238
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 79
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 191
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 192 ESLTESKFSVA-SDVWSFGVVLYEL 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 74
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 187 ESLTESKFSVA-SDVWSFGVVLYEL 210
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y V A R G VA+K + + + K+ RE+ ++K +RH N+I L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHENVIGLLD 91
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+ ++ Y++M + G+ L + + + E R + Q++ + Y H G+
Sbjct: 92 VFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI 149
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE-ILKGV 244
+HRD+K NL ++ + +K+ DFG AR G + Y +PE IL +
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGX--------VVTRWYRAPEVILNWM 201
Query: 245 PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
YT D+WS+G ++ M G+ F ++++ LK++
Sbjct: 202 RYT-QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 238
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 77
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 189
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 190 ESLTESKFSVA-SDVWSFGVVLYEL 213
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGXVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 81
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 193
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 194 ESLTESKFSVA-SDVWSFGVVLYEL 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 105
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 217
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 218 ESLTESKFSVA-SDVWSFGVVLYEL 241
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 73
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 185
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 186 ESLTESKFSVA-SDVWSFGVVLYEL 209
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 92
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 204
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 205 ESLTESKFSVA-SDVWSFGVVLYEL 228
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 80
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 192
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 193 ESLTESKFSVA-SDVWSFGVVLYEL 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+ V G +A K++ +E P + + RE+ V+ P ++ F
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLI-HLEIKPAIRNQII-RELQVLHECNSPYIVGFYG 81
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER-GVVHRDI 190
A + + I ME+ + GSL ++ I E K ++ + Y E+ ++HRD+
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV 141
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L++ IKL DFG + G + ++++F G+ +Y +PE L+G Y+
Sbjct: 142 KPSNILVNSRGEIKLCDFGVS-GQLI------DSMANSFVGTRSYMAPERLQGTHYSVQ- 193
Query: 251 SDVWSMGVVLYAMAFGRLPF 270
SD+WSMG+ L +A GR P
Sbjct: 194 SDIWSMGLSLVELAVGRYPI 213
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 78
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 190
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 191 ESLTESKFSVA-SDVWSFGVVLYEL 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 74
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 187 ESLTESKFSVA-SDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 72
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 184
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 185 ESLTESKFSVA-SDVWSFGVVLYEL 208
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR +G + Y Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMEPEVVTRY-YRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ Y + D+WS+G ++ M ++ F +YI +V ++ P
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 92
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 204
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 205 ESLTESKFSVA-SDVWSFGVVLYEL 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ L ++G G+Y V AT G VA+K + + P L+ REI ++K +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHEN 70
Query: 126 LIRFLQ-----AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
+I + E + VYII E + L + + + + + Q + A+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYA 234
H V+HRD+K NLLI+ ++K+ DFG AR +G QS + + F +
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE-FVATRW 187
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNY 275
Y +PE++ DVWS G +L + R F +Y
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 108
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 166
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + Y +PEI+
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVATRWYRAPEIMLNWM 218
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 16/221 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ L ++G G+Y V AT G VA+K + + P L+ REI ++K +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHEN 70
Query: 126 LIRFLQ-----AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
+I + E + VYII E + L + + + + + Q + A+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYA 234
H V+HRD+K NLLI+ ++K+ DFG AR +G QS +++ + +
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE-YVATRW 187
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNY 275
Y +PE++ DVWS G +L + R F +Y
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 77
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQREG-YIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q ID + ++ Q+ ++Y +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 189
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 190 ESLTESKFSVA-SDVWSFGVVLYEL 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 75
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IMEY GSL D++Q+ + ID + ++ Q+ ++Y +
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HR++ N+L++ E +K+ DFG + + K K +SP+ + YA P
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI-------FWYA-P 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 188 ESLTESKFSVA-SDVWSFGVVLYEL 211
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K IG G+ V A +VA+K +S+ + K+ RE+ ++K + H N+I
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGL 88
Query: 130 L------QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
L +++E VYI+ME + +L IQ E +D R Q++ I + H
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG 243
G++HRD+K N+++ + +K+ DFG AR +G + Y Y +PE++ G
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAGTSFMMEPEVVTRY-YRAPEVILG 199
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ Y + D+WS+G ++ M ++ F +YI +V ++ P
Sbjct: 200 MGYKEN-VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 244
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ FG AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 72 IGIGSYATVKLA---TSTRHGCDVAVKVVS-KVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G GS+ V+ + VAVK + V + P+ + F+ RE++ + L H NLI
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 84
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + T + ++ E A GSLLD +++ +G+ ++ Q+ + + Y + +
Sbjct: 85 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ NLL+ +K+ DFG R H + + P +A+ +PE
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP--------FAWCAPES 195
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQLLKQV 282
LK ++ H SD W GV L+ M +G+ P+ N Q+L ++
Sbjct: 196 LKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 46/277 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + K+F RE+ +++ L H N
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 79
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 132
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSY 187
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 188 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 246
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVK 325
PT + + +P + IK PW K
Sbjct: 247 PTREQI---------REMNPNYTEFKFPQIKAHPWTK 274
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
+ L ++G G+Y V AT G VA+K + + P L+ REI ++K +H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHEN 70
Query: 126 LIRFLQ-----AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
+I + E + VYII E + L + + + + + Q + A+
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYA 234
H V+HRD+K NLLI+ ++K+ DFG AR +G QS +++ +
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW- 187
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNY 275
Y +PE++ DVWS G +L + R F +Y
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 72 IGIGSYATVKLA---TSTRHGCDVAVKVVS-KVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G GS+ V+ + VAVK + V + P+ + F+ RE++ + L H NLI
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 78
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + T + ++ E A GSLLD +++ +G+ ++ Q+ + + Y + +
Sbjct: 79 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ NLL+ +K+ DFG R H + + P +A+ +PE
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWCAPES 189
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQLLKQV 282
LK ++ H SD W GV L+ M +G+ P+ N Q+L ++
Sbjct: 190 LKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G G+Y +V + + G +AVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 117
Query: 132 ------AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 118 VFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 175
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DFG AR H + + Y +PEI+
Sbjct: 176 IHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 227
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
+ D+WS+G ++ + GR F T++I L+Q+
Sbjct: 228 HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQI 264
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 72 IGIGSYATVKLA---TSTRHGCDVAVKVVS-KVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G GS+ V+ + VAVK + V + P+ + F+ RE++ + L H NLI
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 74
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + T + ++ E A GSLLD +++ +G+ ++ Q+ + + Y + +
Sbjct: 75 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ NLL+ +K+ DFG R H + + P +A+ +PE
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP--------FAWCAPES 185
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQLLKQV 282
LK ++ H SD W GV L+ M +G+ P+ N Q+L ++
Sbjct: 186 LKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+VIG G + V +L + VA+K + K ++FL E ++ HPN+
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFL-SEASIMGQFEHPNI 79
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGV 185
IR + + V I+ E+ E G+L F++ +G + R + + Y E
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS---YAYASPEILK 242
VHRD+ N+L++ K+SDFG +R + P + G + +PE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSR---FLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SD WS G+V++ M+FG P+ D + ++ ++ P P +C T
Sbjct: 197 FRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPP----DCPTS 251
Query: 302 LSKIF 306
L ++
Sbjct: 252 LHQLM 256
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 61 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 111
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 112 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 171
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 172 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 225
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 284
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 285 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 331
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 72 IGIGSYATVKLA---TSTRHGCDVAVKVVS-KVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G GS+ V+ + VAVK + V + P+ + F+ RE++ + L H NLI
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 84
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + T + ++ E A GSLLD +++ +G+ ++ Q+ + + Y + +
Sbjct: 85 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ NLL+ +K+ DFG R H + + P +A+ +PE
Sbjct: 144 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWCAPES 195
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQLLKQV 282
LK ++ H SD W GV L+ M +G+ P+ N Q+L ++
Sbjct: 196 LKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ D G AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 72 IGIGSYATVKLA---TSTRHGCDVAVKVVS-KVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G GS+ V+ + VAVK + V + P+ + F+ RE++ + L H NLI
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 78
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + T + ++ E A GSLLD +++ +G+ ++ Q+ + + Y + +
Sbjct: 79 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 137
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ NLL+ +K+ DFG R H + + P +A+ +PE
Sbjct: 138 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWCAPES 189
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQLLKQV 282
LK ++ H SD W GV L+ M +G+ P+ N Q+L ++
Sbjct: 190 LKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 55 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 105
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 106 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 165
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 219
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 278
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 279 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 325
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 22/226 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V + ++ VAVK + + +++FL +E V+K
Sbjct: 29 MERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 84
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YI+ EY G+LLD++ RE +E Q+ A+
Sbjct: 85 IKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAM 143
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 144 EYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 203
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQL 278
AY + I SDVW+ GV+L+ +A +G P+ + Q+
Sbjct: 204 AYNTFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQV 240
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V+L G VAVK + + PD + F REI ++K L ++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDF-QREIQILKALHSDFIV 74
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQRE-GYIDEPRTKKWFRQLVDAIDYCHERG 184
++ R + ++MEY G L DF+QR +D R + Q+ ++Y R
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
VHRD+ N+L++ E ++K++DFG A + + + QSP+ + YA P
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI-------FWYA-P 186
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 187 ESLSDNIFS-RQSDVWSFGVVLYEL 210
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 46/277 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + K+F RE+ +++ L H N
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 78
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 131
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 132 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSX 186
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 187 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 245
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVK 325
PT + + +P + IK PW K
Sbjct: 246 PTREQI---------REMNPNYTEFKFPQIKAHPWTK 273
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ E E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ D G AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 46/278 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + K+F RE+ +++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 74
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSX 182
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKT 326
PT + + +P + IK PW K
Sbjct: 242 PTREQI---------REMNPNYTEFKFPQIKAHPWTKV 270
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ D G AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 72 IGIGSYATVKLA---TSTRHGCDVAVKVVS-KVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G GS+ V+ + VAVK + V + P+ + F+ RE++ + L H NLI
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 74
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + T + ++ E A GSLLD +++ +G+ ++ Q+ + + Y + +
Sbjct: 75 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ NLL+ +K+ DFG R H + + P +A+ +PE
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWCAPES 185
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQLLKQV 282
LK ++ H SD W GV L+ M +G+ P+ N Q+L ++
Sbjct: 186 LKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 23/223 (10%)
Query: 72 IGIGSYATVKLA---TSTRHGCDVAVKVVS-KVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G GS+ V+ + VAVK + V + P+ + F+ RE++ + L H NLI
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI-REVNAMHSLDHRNLI 74
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + T + ++ E A GSLLD +++ +G+ ++ Q+ + + Y + +
Sbjct: 75 R-LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 133
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ NLL+ +K+ DFG R H + + P +A+ +PE
Sbjct: 134 HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--------FAWCAPES 185
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQLLKQV 282
LK ++ H SD W GV L+ M +G+ P+ N Q+L ++
Sbjct: 186 LKTRTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 11 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 61
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 62 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 121
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 175
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 235 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 281
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 77
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ E E GSL F+++ + + R + + Y +
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 189
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 190 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 248
Query: 297 ECKTLL 302
L+
Sbjct: 249 ALYQLM 254
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 15 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 65
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 66 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 125
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 126 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 179
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 238
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 239 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 285
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V+L G VAVK + + PD + F REI ++K L ++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDF-QREIQILKALHSDFIV 87
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQRE-GYIDEPRTKKWFRQLVDAIDYCHERG 184
++ R + ++MEY G L DF+QR +D R + Q+ ++Y R
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
VHRD+ N+L++ E ++K++DFG A + + + QSP+ + YA P
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI-------FWYA-P 199
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 200 ESLSDNIFS-RQSDVWSFGVVLYEL 223
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 16 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 66
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 67 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 126
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 127 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 180
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 239
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 240 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 286
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 46/278 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + K+F RE+ +++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 74
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSX 182
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKT 326
PT + + +P + IK PW K
Sbjct: 242 PTREQI---------REMNPNYTEFKFPQIKAHPWTKV 270
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V+L G VAVK + + PD + F REI ++K L ++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDF-QREIQILKALHSDFIV 75
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQRE-GYIDEPRTKKWFRQLVDAIDYCHERG 184
++ R + ++MEY G L DF+QR +D R + Q+ ++Y R
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
VHRD+ N+L++ E ++K++DFG A + + + QSP+ + YA P
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI-------FWYA-P 187
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 188 ESLSDNIFS-RQSDVWSFGVVLYEL 211
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 17 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 67
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 68 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 127
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 128 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 181
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 240
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 241 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 287
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 9 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 59
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 60 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 119
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 173
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 233 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 279
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 25 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 75
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 76 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 135
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 136 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 189
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 248
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 249 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 295
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 46/278 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + K+F RE+ +++ L H N
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 75
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 128
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSX 183
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 184 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 242
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKT 326
PT + + +P + IK PW K
Sbjct: 243 PTREQI---------REMNPNYTEFKFPQIKAHPWTKV 271
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 22/246 (8%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+ KV+G G + V +L ++ VA+K + KV + FL E ++ HP
Sbjct: 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTL-KVGYTEKQRRDFLG-EASIMGQFDHP 106
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHER 183
N+IR + + V I+ E E GSL F+++ + + R + + Y +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYAS 237
G VHRD+ N+LI+ K+SDFG +R G + P+ + S
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTS 218
Query: 238 PEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
PE + +T SDVWS G+VL+ M++G P+ + + ++K V P + A
Sbjct: 219 PEAIAYRKFTSA-SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA 277
Query: 297 ECKTLL 302
L+
Sbjct: 278 ALYQLM 283
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K IG G + V + + A+K V+ EA L + EI + L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 115
Query: 126 --LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR T +Y++ME L +++++ ID K +++ +++A+ H+
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 184 GVVHRDIKCENLLI-DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
G+VH D+K N LI DG +KL DFG A + + S + D+ G+ Y PE +K
Sbjct: 175 GIVHSDLKPANFLIVDGM--LKLIDFGIAN---QMQPDTTSVVKDSQVGAVNYMPPEAIK 229
Query: 243 GVPYTPH----------YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+ + SDVWS+G +LY M +G+ PF Q++ Q+ +K+ +P
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQI-SKLHAIIDP 283
Query: 293 NVSAECKTLLSKIFSPI---------KFRIRLKDIKQDPWVKTEANPA 331
N E + K + K RI + ++ P+V+ + +P
Sbjct: 284 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 331
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K IG G + V + + A+K V+ EA L + EI + L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 115
Query: 126 --LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR T +Y++ME L +++++ ID K +++ +++A+ H+
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 184 GVVHRDIKCENLLI-DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
G+VH D+K N LI DG +KL DFG A + + S + D+ G+ Y PE +K
Sbjct: 175 GIVHSDLKPANFLIVDGM--LKLIDFGIAN---QMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 243 GVPYTPH----------YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+ + SDVWS+G +LY M +G+ PF Q++ Q+ +K+ +P
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQI-SKLHAIIDP 283
Query: 293 NVSAECKTLLSKIFSPI---------KFRIRLKDIKQDPWVKTEANPA 331
N E + K + K RI + ++ P+V+ + +P
Sbjct: 284 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 331
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 10 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 60
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 61 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 120
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 121 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 174
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 233
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 234 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 280
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 11 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 61
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 62 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 121
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 175
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 234
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 235 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 281
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 46/278 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + K+F RE+ +++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 74
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSY 182
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKT 326
PT + + +P + IK PW K
Sbjct: 242 PTREQI---------REMNPNYTEFKFPQIKAHPWTKV 270
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 36/274 (13%)
Query: 61 MENHGYVLG------KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPRE 114
M HG+ LG K +G G V ++ + CD V + V P +K L RE
Sbjct: 2 MNIHGFDLGSRYMDLKPLGCGGNGLV--FSAVDNDCDKRVAIKKIVLTDPQSVKHAL-RE 58
Query: 115 IDVVKGLRHPNLIRFLQ--------------AIETTHRVYIIMEYAEKGSLLDFIQREGY 160
I +++ L H N+++ + ++ + VYI+ EY E L + +G
Sbjct: 59 IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGP 116
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGE-YNIKLSDFGFARGHMKCKS 219
+ E + + QL+ + Y H V+HRD+K NL I+ E +K+ DFG AR M
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI-MDPHY 175
Query: 220 GHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
H+ LS+ + Y SP +L D+W+ G + M G+ F + ++
Sbjct: 176 SHKGHLSEGLVTKW-YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-- 232
Query: 280 KQVQTKVVFPTEPNVSAECKT-LLSKIFSPIKFR 312
Q +++ + P V E + LLS I P+ R
Sbjct: 233 ---QMQLILESIPVVHEEDRQELLSVI--PVYIR 261
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR---HPNLIR 128
IG+G+Y TV A G VA+K V +V + L RE+ +++ L HPN++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 129 FLQAIETTH-----RVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
+ T+ +V ++ E+ ++ + LD G E K RQ + +D+ H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLDFLH 129
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+VHRD+K EN+L+ +KL+DFG AR + +Q L D + Y +PE+L
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIY-----SYQMAL-DPVVVTLWYRAPEVL 183
Query: 242 KGVPY-TPHYSDVWSMGVVLYAMAFGRLPF 270
Y TP D+WS+G + +A F R P
Sbjct: 184 LQSTYATP--VDMWSVGCI-FAEMFRRKPL 210
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 21/221 (9%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRH-P 124
Y L + +G G Y+ V A + + V VK++ V+ K + REI +++ LR P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KNKIKREIKILENLRGGP 92
Query: 125 NLIRFLQAIE--TTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHE 182
N+I ++ + ++ E+ DF Q + + + + +++ A+DYCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYCHS 149
Query: 183 RGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
G++HRD+K N++ID E+ ++L D+G A + H + S + PE+L
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY------HPGQEYNVRVASRYFKGPELL 203
Query: 242 KGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
+ D+WS+G +L +M F + PF NY QL++
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 244
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 18/245 (7%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+VIG G + V +L + VA+K + K ++FL E ++ HPN+
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFL-SEASIMGQFEHPNI 77
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGV 185
IR + + V I+ E+ E G+L F++ +G + R + + Y E
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS---YAYASPEILK 242
VHRD+ N+L++ K+SDFG +R + P + G + +PE +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSR---FLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTL 301
+T SD WS G+V++ M+FG P+ D + ++ ++ P P+ C T
Sbjct: 195 FRKFT-SASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPD----CPTS 249
Query: 302 LSKIF 306
L ++
Sbjct: 250 LHQLM 254
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 17/224 (7%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFL- 130
+G G+Y +V A T+ G VAVK +S+ + K+ RE+ ++K ++H N+I L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 88
Query: 131 -----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+++E + VY++ G+ L+ I + + + + Q++ + Y H +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K NL ++ + +K+ DF AR H + + Y +PEI+
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLAR--------HTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 246 YTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ D+WS+G ++ + GR F T++I LK + V P
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 66
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 125
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYAS 237
+Y ++ +HRD+ N L+ + +K++DFG +R + + +P F + +
Sbjct: 126 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAPAGAKF--PIKWTA 181
Query: 238 PEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
PE L ++ SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 182 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 227
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K IG G + V + + A+K V+ EA L + EI + L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 115
Query: 126 --LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR T +Y++ME L +++++ ID K +++ +++A+ H+
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 184 GVVHRDIKCENLLI-DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
G+VH D+K N LI DG +KL DFG A + + S + D+ G+ Y PE +K
Sbjct: 175 GIVHSDLKPANFLIVDGM--LKLIDFGIAN---QMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 243 GVPYTPH----------YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+ + SDVWS+G +LY M +G+ PF Q++ Q+ +K+ +P
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQI-SKLHAIIDP 283
Query: 293 NVSAECKTLLSKIFSPI---------KFRIRLKDIKQDPWVKTEANPA 331
N E + K + K RI + ++ P+V+ + +P
Sbjct: 284 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 331
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 67
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 126
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYAS 237
+Y ++ +HRD+ N L+ + +K++DFG +R + + +P F + +
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR--LMTGDTYTAPAGAKF--PIKWTA 182
Query: 238 PEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
PE L ++ SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 183 PESLAYNKFSIK-SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 228
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V+L G VAVK + + PD + F REI ++K L ++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ--HSGPDQQRDF-QREIQILKALHSDFIV 71
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ R + ++MEY G L DF+QR +D R + Q+ ++Y R
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
VHRD+ N+L++ E ++K++DFG A + + QSP+ + YA P
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI-------FWYA-P 183
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 184 ESLSDNIFS-RQSDVWSFGVVLYEL 207
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 46/278 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + +A F RE+ +++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-------FKNRELQIMRKLDHCN 74
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSY 182
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKT 326
PT + + +P + IK PW K
Sbjct: 242 PTREQI---------REMNPNYTEFKFPQIKAHPWTKV 270
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 25/205 (12%)
Query: 72 IGIGSYATVKLA----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G++ +V++ G VAVK + + ++L+ F REI+++K L+H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ--HSTEEHLRDF-EREIEILKSLQHDNIV 77
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERG 184
++ + R + +IME+ GSL +++Q+ + ID + ++ Q+ ++Y +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFA------RGHMKCKSGHQSPLSDTFCGSYAYASP 238
+HRD+ N+L++ E +K+ DFG + K K +SP+ + YA P
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI-------FWYA-P 189
Query: 239 EILKGVPYTPHYSDVWSMGVVLYAM 263
E L ++ SDVWS GVVLY +
Sbjct: 190 ESLTESKFSVA-SDVWSFGVVLYEL 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 66
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII+E+ G+LLD++ RE E Q+ A+
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 125
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 126 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 185
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 186 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 227
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII+E+ G+LLD++ RE E Q+ A+
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 129
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 190 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 231
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 9 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 59
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 60 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 119
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S L
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-L 174
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
++ C + Y +PE+L Y D+WS+GV++Y + G PF + + + ++T+
Sbjct: 175 TEP-CYTPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 232
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 233 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 279
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K IG G + V + + A+K V+ EA L + EI + L+ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 68
Query: 126 --LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR T +Y++ME L +++++ ID K +++ +++A+ H+
Sbjct: 69 DKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 184 GVVHRDIKCENLLI-DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
G+VH D+K N LI DG +KL DFG A + + S + D+ G+ Y PE +K
Sbjct: 128 GIVHSDLKPANFLIVDGM--LKLIDFGIAN---QMQPDTTSVVKDSQVGTVNYMPPEAIK 182
Query: 243 GVPYTPH----------YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+ + SDVWS+G +LY M +G+ PF Q++ Q+ +K+ +P
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQI-SKLHAIIDP 236
Query: 293 NVSAECKTLLSKIFSPI---------KFRIRLKDIKQDPWVKTEANPA 331
N E + K + K RI + ++ P+V+ + +P
Sbjct: 237 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 284
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 46/278 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + K+F RE+ +++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCN 74
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSX 182
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKT 326
PT + + +P + IK PW K
Sbjct: 242 PTREQI---------REMNPNYTEFKFPQIKAHPWTKV 270
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 22/210 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR---HPNLIR 128
IG+G+Y TV A G VA+K V +V + L RE+ +++ L HPN++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 129 FLQAIETTH-----RVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
+ T+ +V ++ E+ ++ + LD G E K RQ + +D+ H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLDFLH 129
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+VHRD+K EN+L+ +KL+DFG AR + +Q L+ + Y +PE+L
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIY-----SYQMALAPVVVTLW-YRAPEVL 183
Query: 242 KGVPY-TPHYSDVWSMGVVLYAMAFGRLPF 270
Y TP D+WS+G + +A F R P
Sbjct: 184 LQSTYATP--VDMWSVGCI-FAEMFRRKPL 210
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K IG G + V + + A+K V+ EA L + EI + L+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 87
Query: 126 --LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR T +Y++ME L +++++ ID K +++ +++A+ H+
Sbjct: 88 DKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 184 GVVHRDIKCENLLI-DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
G+VH D+K N LI DG +KL DFG A + + S + D+ G+ Y PE +K
Sbjct: 147 GIVHSDLKPANFLIVDGM--LKLIDFGIAN---QMQPDTTSVVKDSQVGTVNYMPPEAIK 201
Query: 243 GVPYTPH----------YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+ + SDVWS+G +LY M +G+ PF Q++ Q+ +K+ +P
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQI-SKLHAIIDP 255
Query: 293 NVSAECKTLLSKIFSPI---------KFRIRLKDIKQDPWVKTEANPA 331
N E + K + K RI + ++ P+V+ + +P
Sbjct: 256 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 30/257 (11%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP---REIDVVKGLRHP 124
L ++IGIG + V A G +VAVK P + + + + +E + L+HP
Sbjct: 11 LEEIIGIGGFGKVYRAFWI--GDEVAVKAAR--HDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 125 NLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG 184
N+I + ++ME+A +G L+ + I W Q+ ++Y H+
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFA-RGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 185 VV---HRDIKCENLLI-----DGEYN---IKLSDFGFAR-GHMKCKSGHQSPLSDTFCGS 232
+V HRD+K N+LI +G+ + +K++DFG AR H K + G+
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM--------SAAGA 177
Query: 233 YAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV-QTKVVFPTE 291
YA+ +PE+++ ++ SDVWS GV+L+ + G +PF + + + V K+ P
Sbjct: 178 YAWMAPEVIRASMFS-KGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236
Query: 292 PNVSAECKTLLSKIFSP 308
L+ ++P
Sbjct: 237 STCPEPFAKLMEDCWNP 253
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 25/232 (10%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 63
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII+E+ G+LLD++ RE E Q+ A+
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 122
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPF---DDTNYIQLLKQ 281
AY I SDVW+ GV+L+ +A +G P+ D + +LL++
Sbjct: 183 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII+E+ G+LLD++ RE E Q+ A+
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 124
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 185 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 226
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII+E+ G+LLD++ RE E Q+ A+
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 124
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 185 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 24/204 (11%)
Query: 72 IGIGSYATVKL----ATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G + V L T+ G VAVK + K +A P + + +EID+++ L H ++I
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQH-RSGWKQEIDILRTLYHEHII 96
Query: 128 RFLQAIE--TTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E + ++MEY GSL D++ R I + + +Q+ + + Y H +
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GH--MKCKSGHQSPLSDTFCGSYAYASPE 239
+HRD+ N+L+D + +K+ DFG A+ GH + + SP+ + YA PE
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV-------FWYA-PE 207
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAM 263
LK + + SDVWS GV LY +
Sbjct: 208 CLKEYKFY-YASDVWSFGVTLYEL 230
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 129
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 189
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 190 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 231
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 129
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 190 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 231
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K IG G + V + + A+K V+ EA L + EI + L+ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYR-NEIAYLNKLQQHS 71
Query: 126 --LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR T +Y++ME L +++++ ID K +++ +++A+ H+
Sbjct: 72 DKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 184 GVVHRDIKCENLLI-DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
G+VH D+K N LI DG +KL DFG A + + S + D+ G+ Y PE +K
Sbjct: 131 GIVHSDLKPANFLIVDGM--LKLIDFGIAN---QMQPDTTSVVKDSQVGTVNYMPPEAIK 185
Query: 243 GVPYT----------PHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+ + SDVWS+G +LY M +G+ PF Q++ Q+ +K+ +P
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQI-SKLHAIIDP 239
Query: 293 NVSAECKTLLSKIFSPI---------KFRIRLKDIKQDPWVKTEANPA 331
N E + K + K RI + ++ P+V+ + +P
Sbjct: 240 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 287
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 63
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 122
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESL 182
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPF---DDTNYIQLLKQ 281
AY I SDVW+ GV+L+ +A +G P+ D + +LL++
Sbjct: 183 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 129
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 190 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 231
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 20/252 (7%)
Query: 53 DVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVS---KVEAPPDYLKK 109
DVK ++ E + +G G +ATV A VA+K + + EA D + +
Sbjct: 4 DVKSRAKRYEKLDF-----LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK-DGINR 57
Query: 110 FLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEP-RTKK 168
REI +++ L HPN+I L A + ++ ++ E L I+ + P K
Sbjct: 58 TALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKA 116
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT 228
+ + ++Y H+ ++HRD+K NLL+D +KL+DFG A+ + +
Sbjct: 117 YMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR 176
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLKQVQTKV 286
+ Y +PE+L G D+W++G +L + R+PF D++ QL + +T +
Sbjct: 177 W-----YRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFET-L 229
Query: 287 VFPTEPNVSAEC 298
PTE C
Sbjct: 230 GTPTEEQWPDMC 241
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 69
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 70 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 128
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 129 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 188
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 189 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 230
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 67
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 126
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 187 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 228
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 63 NHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVE--APPDYLKKFLPREIDVVKG 120
NH ++L ++G G+ A V + G A+KV + + P D RE +V+K
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM----REFEVLKK 63
Query: 121 LRHPNLIRFLQAIE---TTHRVYIIMEYAEKGSLLDFIQR--EGY-IDEPRTKKWFRQLV 174
L H N+++ L AIE TT +IME+ GSL ++ Y + E R +V
Sbjct: 64 LNHKNIVK-LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 175 DAIDYCHERGVVHRDIKCENLLI----DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFC 230
+++ E G+VHR+IK N++ DG+ KL+DFG AR + + Q +
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQFV---SLY 176
Query: 231 GSYAYASPEIL-KGVPYTPHYS------DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
G+ Y P++ + V H D+WS+GV Y A G LPF + K+V
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236
Query: 284 TKVV 287
K++
Sbjct: 237 YKII 240
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 70
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 129
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 130 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 189
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 190 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 231
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 67
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 126
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 127 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 186
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 187 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 228
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 124
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 185 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 226
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 46/278 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + +A F RE+ +++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-------FKNRELQIMRKLDHCN 74
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSY 182
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKT 326
PT + + +P IK PW K
Sbjct: 242 PTREQI---------REMNPNYTEFAFPQIKAHPWTKV 270
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 124
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 185 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 226
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 46/278 (16%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y KVIG GS+ V A G VA+K V + +A F RE+ +++ L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA-------FKNRELQIMRKLDHCN 74
Query: 126 LIR----FLQAIETTHRVYIIMEYAEKGSLLDFIQREGY------------IDEPRTKKW 169
++R F + E VY+ + +LD++ Y + K +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNL-------VLDYVPATVYRVARHYSRAKQTLPVIYVKLY 127
Query: 170 FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDT 228
QL ++ Y H G+ HRDIK +NLL+D + + KL DFG A+ ++ + P
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-----PNVSX 182
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVF 288
C Y Y +PE++ G DVWS G VL + G+ F + + L ++ +
Sbjct: 183 ICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 289 PTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPWVKT 326
PT + + +P IK PW K
Sbjct: 242 PTREQI---------REMNPNYTEFAFPQIKAHPWTKV 270
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K IG G + V + + A+K V+ EA L + EI + L+ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 67
Query: 126 --LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR T +Y++ME L +++++ ID K +++ +++A+ H+
Sbjct: 68 DKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 184 GVVHRDIKCENLLI-DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
G+VH D+K N LI DG +KL DFG A + + S + D+ G+ Y PE +K
Sbjct: 127 GIVHSDLKPANFLIVDGM--LKLIDFGIAN---QMQPDTTSVVKDSQVGTVNYMPPEAIK 181
Query: 243 GVPYTPH----------YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+ + SDVWS+G +LY M +G+ PF Q++ Q+ +K+ +P
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQI-SKLHAIIDP 235
Query: 293 NVSAECKTLLSKIFSPI---------KFRIRLKDIKQDPWVKTEANPA 331
N E + K + K RI + ++ P+V+ + +P
Sbjct: 236 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 283
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 23 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 78
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 79 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 137
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 138 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 197
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 198 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 239
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 124
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 185 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 22/231 (9%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
KVIG+G + V +L + VA+K + D ++ E ++ HPN+
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKA--GYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGV 185
I + V II EY E GSL F+++ +G + R + + Y +
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA 152
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYASPE 239
VHRD+ N+L++ K+SDFG +R G + P+ + +PE
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR--------WTAPE 204
Query: 240 ILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ +T SDVWS G+V++ M++G P+ D + ++K ++ P
Sbjct: 205 AIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 254
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 65
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 124
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 184
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 185 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 226
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 22/210 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR---HPNLIR 128
IG+G+Y TV A G VA+K V +V + L RE+ +++ L HPN++R
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 129 FLQAIETTH-----RVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
+ T+ +V ++ E+ ++ + LD G E K RQ + +D+ H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLRGLDFLH 129
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
+VHRD+K EN+L+ +KL+DFG AR + +Q L + Y +PE+L
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIY-----SYQMALFPVVVTLW-YRAPEVL 183
Query: 242 KGVPY-TPHYSDVWSMGVVLYAMAFGRLPF 270
Y TP D+WS+G + +A F R P
Sbjct: 184 LQSTYATP--VDMWSVGCI-FAEMFRRKPL 210
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ TV T +VA + + ++F E + +KGL+HPN++RF
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRF-KEEAEXLKGLQHPNIVRFYD 92
Query: 132 AIETTHR----VYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERG--V 185
+ E+T + + ++ E G+L +++R + W RQ++ + + H R +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 186 VHRDIKCENLLIDGEY-NIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
+HRD+KC+N+ I G ++K+ D G A + ++ + G+ + +PE
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLA-------TLKRASFAKAVIGTPEFXAPE----- 200
Query: 245 PYTPHYS---DVWSMGVVLYAMAFGRLPFDDT-NYIQLLKQVQTKV 286
Y Y DV++ G A P+ + N Q+ ++V + V
Sbjct: 201 XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGV 246
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 22/244 (9%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+VIG G + V +L + VA+K + KV + FL E ++ HPN+
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTL-KVGYTEKQRRDFLC-EASIMGQFDHPNV 106
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGV 185
+ + V I++E+ E G+L F+++ +G + R + + Y + G
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY 166
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYASPE 239
VHRD+ N+L++ K+SDFG +R + +G + P+ + +PE
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR--------WTAPE 218
Query: 240 ILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAEC 298
++ +T SDVWS G+V++ M++G P+ D + ++K ++ P + A
Sbjct: 219 AIQYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGL 277
Query: 299 KTLL 302
L+
Sbjct: 278 HQLM 281
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 272
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 331
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HR++ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 332 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 391
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 392 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 433
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 22/231 (9%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
KVIG+G + V +L + VA+K + D ++ E ++ HPN+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKA--GYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGV 185
I + V II EY E GSL F+++ +G + R + + Y +
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 137
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYASPE 239
VHRD+ N+L++ K+SDFG +R G + P+ + +PE
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR--------WTAPE 189
Query: 240 ILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ +T SDVWS G+V++ M++G P+ D + ++K ++ P
Sbjct: 190 AIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 36/288 (12%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + K IG G + V + + A+K V+ EA L + EI + L+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 87
Query: 126 --LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
+IR T +Y++ME L +++++ ID K +++ +++A+ H+
Sbjct: 88 DKIIRLYDYEITDQYIYMVMECGNI-DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 184 GVVHRDIKCENLLI-DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
G+VH D+K N LI DG +KL DFG A + + + D+ G+ Y PE +K
Sbjct: 147 GIVHSDLKPANFLIVDGM--LKLIDFGIAN---QMQPDXXXVVKDSQVGTVNYMPPEAIK 201
Query: 243 GVPYTPH----------YSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEP 292
+ + SDVWS+G +LY M +G+ PF Q++ Q+ +K+ +P
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-----QIINQI-SKLHAIIDP 255
Query: 293 NVSAECKTLLSKIFSPI---------KFRIRLKDIKQDPWVKTEANPA 331
N E + K + K RI + ++ P+V+ + +P
Sbjct: 256 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 22/244 (9%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+VIG G + V +L + VA+K + KV + FL E ++ HPN+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTL-KVGYTEKQRRDFL-GEASIMGQFDHPNI 85
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGV 185
I + + V I+ EY E GSL F+++ +G + R + + Y + G
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYASPE 239
VHRD+ N+LI+ K+SDFG +R G + P+ + +PE
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR--------WTAPE 197
Query: 240 ILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAEC 298
+ +T SDVWS G+V++ +++G P+ + ++K V+ P+ + A
Sbjct: 198 AIAFRKFTSA-SDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAAL 256
Query: 299 KTLL 302
L+
Sbjct: 257 YQLM 260
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 114/244 (46%), Gaps = 30/244 (12%)
Query: 63 NHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVE--APPDYLKKFLPREIDVVKG 120
NH ++L ++G G+ A V + G A+KV + + P D RE +V+K
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM----REFEVLKK 63
Query: 121 LRHPNLIRFLQAIE---TTHRVYIIMEYAEKGSLLDFIQR--EGY-IDEPRTKKWFRQLV 174
L H N+++ L AIE TT +IME+ GSL ++ Y + E R +V
Sbjct: 64 LNHKNIVK-LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 175 DAIDYCHERGVVHRDIKCENLLI----DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFC 230
+++ E G+VHR+IK N++ DG+ KL+DFG AR + + Q
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQFV---XLY 176
Query: 231 GSYAYASPEIL-KGVPYTPHYS------DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ 283
G+ Y P++ + V H D+WS+GV Y A G LPF + K+V
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236
Query: 284 TKVV 287
K++
Sbjct: 237 YKII 240
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 214 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 269
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 270 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 328
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HR++ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 329 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 388
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 389 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 430
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G GS+ V + G AVK V L+ F E+ GL P ++
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYG 117
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
A+ V I ME E GSL I++ G + E R + Q ++ ++Y H R ++H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 192 CENLLI--DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+N+L+ DG L DFG A G D G+ + +PE++ G P
Sbjct: 178 ADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 236
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQ 277
D+WS ++ M G P+ T Y +
Sbjct: 237 V-DIWSSCCMMLHMLNGCHPW--TQYFR 261
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G GS+ V + G AVK V L+ F E+ GL P ++
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYG 133
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
A+ V I ME E GSL I++ G + E R + Q ++ ++Y H R ++H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 192 CENLLI--DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+N+L+ DG L DFG A G D G+ + +PE++ G P
Sbjct: 194 ADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 252
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQ 277
D+WS ++ M G P+ T Y +
Sbjct: 253 V-DIWSSCCMMLHMLNGCHPW--TQYFR 277
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 76
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q Y +D + QL A+ Y +
Sbjct: 77 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 135
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 191
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 192 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 250
Query: 305 IFS 307
++
Sbjct: 251 CWA 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q Y +D + QL A+ Y +
Sbjct: 79 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 193
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 194 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 252
Query: 305 IFS 307
++
Sbjct: 253 CWA 255
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G Y V ++ VAVK + + +++FL +E V+K
Sbjct: 256 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 311
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 312 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAM 370
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HR++ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 371 EYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 430
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQ 283
AY I SDVW+ GV+L+ +A +G P+ + Q+ + ++
Sbjct: 431 AYNKFSIK---------SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 472
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 14/263 (5%)
Query: 48 AANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDY 106
A+ RD + + +E LG+ IG G + V + +AV + + D
Sbjct: 1 GASTRDYEIQRERIE-----LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS 55
Query: 107 LKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPR 165
+++ +E ++ HP++++ + I T + V+IIME G L F+Q Y +D
Sbjct: 56 VREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLAS 114
Query: 166 TKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL 225
+ QL A+ Y + VHRDI N+L+ +KL DFG +R +M+ + +++
Sbjct: 115 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 173
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQT 284
+ +PE + +T SDVW GV ++ + G PF ++ +++
Sbjct: 174 GKL---PIKWMAPESINFRRFTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 229
Query: 285 KVVFPTEPNVSAECKTLLSKIFS 307
P PN +L++K ++
Sbjct: 230 GERLPMPPNCPPTLYSLMTKCWA 252
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 22/231 (9%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
KVIG+G + V +L + VA+K + D ++ E ++ HPN+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKA--GYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQR-EGYIDEPRTKKWFRQLVDAIDYCHERGV 185
I + V II EY E GSL F+++ +G + R + + Y +
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYASPE 239
VHRD+ N+L++ K+SDFG +R G + P+ + +PE
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR--------WTAPE 183
Query: 240 ILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+ +T SDVWS G+V++ M++G P+ D + ++K ++ P
Sbjct: 184 AIAYRKFTSA-SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 233
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q Y +D + QL A+ Y +
Sbjct: 71 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 129
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 185
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 186 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 244
Query: 305 IFS 307
++
Sbjct: 245 CWA 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 101
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q Y +D + QL A+ Y +
Sbjct: 102 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 160
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 216
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 217 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 275
Query: 305 IFS 307
++
Sbjct: 276 CWA 278
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q Y +D + QL A+ Y +
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 188
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 189 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 247
Query: 305 IFS 307
++
Sbjct: 248 CWA 250
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G GS+ V + G AVK V L+ F E+ GL P ++
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYG 131
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
A+ V I ME E GSL I++ G + E R + Q ++ ++Y H R ++H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 192 CENLLI--DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+N+L+ DG L DFG A G D G+ + +PE++ G P
Sbjct: 192 ADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 250
Query: 250 YSDVWSMGVVLYAMAFGRLPFDDTNYIQ 277
D+WS ++ M G P+ T Y +
Sbjct: 251 V-DIWSSCCMMLHMLNGCHPW--TQYFR 275
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q R+ +D + QL A+ Y +
Sbjct: 454 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 568
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 569 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 627
Query: 305 IFS 307
++
Sbjct: 628 CWA 630
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLAFRHENIIGIND 90
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 148
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 206
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLP----REIDVVKGLR---HP 124
IG+G+Y TV A G VA+K V LP RE+ +++ L HP
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNG--GGGGGGLPISTVREVALLRRLEAFEHP 74
Query: 125 NLIRFLQAIETTH-----RVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAI 177
N++R + T+ +V ++ E+ ++ + LD G E K RQ + +
Sbjct: 75 NVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFLRGL 133
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYAS 237
D+ H +VHRD+K EN+L+ +KL+DFG AR + +Q L+ + Y +
Sbjct: 134 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-----SYQMALTPVVVTLW-YRA 187
Query: 238 PEILKGVPY-TPHYSDVWSMGVVLYAMAFGRLPF 270
PE+L Y TP D+WS+G + +A F R P
Sbjct: 188 PEVLLQSTYATP--VDMWSVGCI-FAEMFRRKPL 218
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q Y +D + QL A+ Y +
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 188
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 189 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 247
Query: 305 IFS 307
++
Sbjct: 248 CWA 250
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 120/267 (44%), Gaps = 23/267 (8%)
Query: 59 TVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVV 118
+++N Y+ + +G G ++ V L G A+K + E ++ RE D+
Sbjct: 24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD---REEAQREADMH 80
Query: 119 KGLRHPNLIRF----LQAIETTHRVYIIMEYAEKGSLLDFIQR----EGYIDEPRTKKWF 170
+ HPN++R L+ H ++++ + ++G+L + I+R ++ E +
Sbjct: 81 RLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140
Query: 171 RQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFG-FARGHMKCKSGHQSPLSDTF 229
+ ++ H +G HRD+K N+L+ E L D G + + + Q+ +
Sbjct: 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200
Query: 230 CG---SYAYASPEILKGVPYT--PHYSDVWSMGVVLYAMAFGRLPFD----DTNYIQLLK 280
+ +Y +PE+ + +DVWS+G VLYAM FG P+D + + L
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL-- 258
Query: 281 QVQTKVVFPTEPNVSAECKTLLSKIFS 307
VQ ++ P P S+ LL+ + +
Sbjct: 259 AVQNQLSIPQSPRHSSALWQLLNSMMT 285
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 61 MENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
ME + +G G + V ++ VAVK + + +++FL +E V+K
Sbjct: 8 MERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL-KEAAVMKE 63
Query: 121 LRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAI 177
++HPNL++ L YII E+ G+LLD++ RE E Q+ A+
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAM 122
Query: 178 DYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSY 233
+Y ++ +HRD+ N L+ + +K++DFG +R +G + P+ T S
Sbjct: 123 EYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL 182
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPF---DDTNYIQLLKQ 281
AY I SDVW+ GV+L+ +A +G P+ D + +LL++
Sbjct: 183 AYNKFSI---------KSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q R+ +D + QL A+ Y +
Sbjct: 454 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 568
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 569 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 627
Query: 305 IFS 307
++
Sbjct: 628 CWA 630
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLAFRHENIIGIND 90
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 148
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 206
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 13/243 (5%)
Query: 70 KVIGIGSYATVKLATSTRHG----CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
KV+G G++ TV G VA+K++++ P ++ F+ E ++ + HP+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FM-DEALIMASMDHPH 101
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERG 184
L+R L + + + ++ + G LL+++ + + I W Q+ + Y ER
Sbjct: 102 LVRLL-GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 160
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
+VHRD+ N+L+ ++K++DFG AR + + +D + + E +
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLAR---LLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 245 PYTPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLS 303
+T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++
Sbjct: 218 KFT-HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMV 276
Query: 304 KIF 306
K +
Sbjct: 277 KCW 279
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 33/250 (13%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
+V+G G++ V + DVA+K ++E+ + +K E+ + + HPN+++
Sbjct: 15 EVVGRGAFGVV--CKAKWRAKDVAIK---QIESESE--RKAFIVELRQLSRVNHPNIVKL 67
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQRE---GYIDEPRTKKWFRQLVDAIDYCHE---R 183
A + V ++MEYAE GSL + + Y W Q + Y H +
Sbjct: 68 YGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 184 GVVHRDIKCENLL-IDGEYNIKLSDFGFA---RGHMKCKSGHQSPLSDTFCGSYAYASPE 239
++HRD+K NLL + G +K+ DFG A + HM G S A+ +PE
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG-----------SAAWMAPE 174
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTN--YIQLLKQVQTKVVFPTEPNVSAE 297
+ +G Y+ DV+S G++L+ + R PFD+ +++ V P N+
Sbjct: 175 VFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP 233
Query: 298 CKTLLSKIFS 307
++L+++ +S
Sbjct: 234 IESLMTRCWS 243
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 58/262 (22%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y LGK +G GS+ V G A+K KV P Y RE+D++K L H N
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALK---KVLQDPRYKN----RELDIMKVLDHVN 61
Query: 126 LIRFLQAIETT---------------------------HR-----------VYIIMEYAE 147
+I+ + TT H+ + +IMEY
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 148 KG---SLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-I 203
L FI+ I + QL A+ + H G+ HRDIK +NLL++ + N +
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 204 KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP-YTPHYSDVWSMGVVLYA 262
KL DFG A+ + + P C + Y +PE++ G YTP D+WS+G V
Sbjct: 182 KLCDFGSAKKLIPSE-----PSVAXICSRF-YRAPELMLGATEYTPSI-DLWSIGCVFGE 234
Query: 263 MAFGRLPFD-DTNYIQLLKQVQ 283
+ G+ F +T+ QL++ +Q
Sbjct: 235 LILGKPLFSGETSIDQLVRIIQ 256
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 70 KVIGIGSYATVKLATSTRHG----CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
KV+G G++ TV G VA+K++++ P ++ F+ + ++ + HP+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEAL-IMASMDHPH 78
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERG 184
L+R L + + + ++ + G LL+++ + + I W Q+ + Y ER
Sbjct: 79 LVRLL-GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR 137
Query: 185 VVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGV 244
+VHRD+ N+L+ ++K++DFG AR + + +D + + E +
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLAR---LLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 245 PYTPHYSDVWSMGVVLYA-MAFGRLPFD 271
+T H SDVWS GV ++ M FG P+D
Sbjct: 195 KFT-HQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 72 IGIGSYATVKL----ATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G + V L T+ G VAVK + + P L+ REI++++ L H +++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ--LRSGWQREIEILRTLYHEHIV 74
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E V ++MEY GSL D++ R + + + +Q+ + + Y H +
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLHAQHY 133
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GH--MKCKSGHQSPLSDTFCGSYAYASPE 239
+HR + N+L+D + +K+ DFG A+ GH + + SP+ + YA PE
Sbjct: 134 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV-------FWYA-PE 185
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTN 274
LK + + SDVWS GV LY + L + D+N
Sbjct: 186 CLKECKFY-YASDVWSFGVTLYEL----LTYCDSN 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 92
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 150
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 208
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 17/156 (10%)
Query: 124 PNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAI 177
P+++ L E H + IIME E G L IQ G E + R + AI
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 178 DYCHERGVVHRDIKCENLLI---DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
+ H + HRD+K ENLL + + +KL+DFGFA+ ++ Q+P C +
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE--TTQNALQTP-----CYTPY 194
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
Y +PE+L Y D+WS+GV++Y + G PF
Sbjct: 195 YVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGFPPF 229
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 33/250 (13%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
+V+G G++ V + DVA+K ++E+ + +K E+ + + HPN+++
Sbjct: 14 EVVGRGAFGVV--CKAKWRAKDVAIK---QIESESE--RKAFIVELRQLSRVNHPNIVKL 66
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQRE---GYIDEPRTKKWFRQLVDAIDYCHE---R 183
A + V ++MEYAE GSL + + Y W Q + Y H +
Sbjct: 67 YGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 184 GVVHRDIKCENLL-IDGEYNIKLSDFGFA---RGHMKCKSGHQSPLSDTFCGSYAYASPE 239
++HRD+K NLL + G +K+ DFG A + HM G S A+ +PE
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG-----------SAAWMAPE 173
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTN--YIQLLKQVQTKVVFPTEPNVSAE 297
+ +G Y+ DV+S G++L+ + R PFD+ +++ V P N+
Sbjct: 174 VFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP 232
Query: 298 CKTLLSKIFS 307
++L+++ +S
Sbjct: 233 IESLMTRCWS 242
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q R+ +D + QL A+ Y +
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + +++ + +PE +
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKL---PIKWMAPESINFRR 188
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 189 FTSA-SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 247
Query: 305 IFS 307
++
Sbjct: 248 CWA 250
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYXQRTL-REIKILLRFRHENIIGIND 92
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 150
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 208
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 17/156 (10%)
Query: 124 PNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKKWFRQLVDAI 177
P+++ L E H + IIME E G L IQ G E + R + AI
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 178 DYCHERGVVHRDIKCENLLI---DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA 234
+ H + HRD+K ENLL + + +KL+DFGFA+ ++ Q+P C +
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE--TTQNALQTP-----CYTPY 175
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
Y +PE+L Y D+WS+GV++Y + G PF
Sbjct: 176 YVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGFPPF 210
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 85 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 143
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 200
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 201 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 259
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 260 WMIDADSRPKFRELIIEFSKMARDP 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 72 IGIGSYATVKL----ATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G + V L T+ G VAVK + + P L+ REI++++ L H +++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQ--LRSGWQREIEILRTLYHEHIV 73
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E V ++MEY GSL D++ R + + + +Q+ + + Y H +
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLHAQHY 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GH--MKCKSGHQSPLSDTFCGSYAYASPE 239
+HR + N+L+D + +K+ DFG A+ GH + + SP+ + YA PE
Sbjct: 133 IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV-------FWYA-PE 184
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTN 274
LK + + SDVWS GV LY + L + D+N
Sbjct: 185 CLKECKFY-YASDVWSFGVTLYEL----LTYCDSN 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
Query: 111 LPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRT---- 166
E+ ++ +++ + I VYII EY E S+L F + +D+ T
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 167 ----KKWFRQLVDAIDYCH-ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGH 221
K + ++++ Y H E+ + HRD+K N+L+D +KLSDFG +M K
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG-ESEYMVDKKIK 208
Query: 222 QSPLSDTFCGSYAYASPEILKG-VPYTPHYSDVWSMGVVLYAMAFGRLPFD-DTNYIQLL 279
S G+Y + PE Y D+WS+G+ LY M + +PF + ++L
Sbjct: 209 GSR------GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262
Query: 280 KQVQTK-VVFPTEPN 293
++TK + +P + N
Sbjct: 263 NNIRTKNIEYPLDRN 277
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 9/243 (3%)
Query: 68 LGKVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
LG+ IG G + V + +AV + + D +++ +E ++ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ + I T + V+IIME G L F+Q R+ +D + QL A+ Y +
Sbjct: 74 VKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRDI N+L+ +KL DFG +R +M+ + ++ + +PE +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKL---PIKWMAPESINFRR 188
Query: 246 YTPHYSDVWSMGVVLYAMAF-GRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T SDVW GV ++ + G PF ++ +++ P PN +L++K
Sbjct: 189 FT-SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 247
Query: 305 IFS 307
++
Sbjct: 248 CWA 250
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 82 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 140
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 197
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 198 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 256
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 257 WMIDADSRPKFRELIIEFSKMARDP 281
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 83 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 198
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 199 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 258 WMIDADSRPKFRELIIEFSKMARDP 282
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 82 RLL-GICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 140
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 197
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 198 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 256
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 257 WMIDADSRPKFRELIIEFSKMARDP 281
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 11/229 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 88
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 204
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 93
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 151
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 209
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 259
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 94
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 152
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 210
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 211 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 260
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 85
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 143
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 201
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 202 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 251
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 92
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 150
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 208
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 11/229 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 88
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 204
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 253
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 86
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 144
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 202
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 81 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 196
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 197 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 256 WMIDADSRPKFRELIIEFSKMARDP 280
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 88
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 204
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 84 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 199
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 200 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 259 WMIDADSRPKFRELIIEFSKMARDP 283
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 90
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 148
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 206
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 256
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 88
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 204
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%), Gaps = 11/236 (4%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + IG G+Y V A VA+K +S E Y ++ L REI ++ RH N
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQ-TYCQRTL-REIQILLRFRHEN 102
Query: 126 LI---RFLQA--IETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
+I L+A +E VYI+ + E L + + + + Q++ + Y
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETD--LYKLLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H V+HRD+K NLLI+ ++K+ DFG AR + H L++ + Y +PEI
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRW-YRAPEI 218
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
+ D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G GS+ V + G AVK V L+ F E+ GL P ++
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYG 152
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
A+ V I ME E GSL ++ +G + E R + Q ++ ++Y H R ++H D+K
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 192 CENLLI--DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+N+L+ DG + L DFG A G D G+ + +PE++ G
Sbjct: 213 ADNVLLSSDGSH-AALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAK 271
Query: 250 YSDVWSMGVVLYAMAFGRLPF 270
DVWS ++ M G P+
Sbjct: 272 V-DVWSSCCMMLHMLNGCHPW 291
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 96
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 154
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 212
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 213 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 262
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 88
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 204
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 205 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 254
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 12/201 (5%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
+G GS+ V + G AVK V L+ F E+ GL P ++
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYG 133
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIK 191
A+ V I ME E GSL ++ +G + E R + Q ++ ++Y H R ++H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 192 CENLLI--DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPH 249
+N+L+ DG + L DFG A G D G+ + +PE++ G
Sbjct: 194 ADNVLLSSDGSH-AALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAK 252
Query: 250 YSDVWSMGVVLYAMAFGRLPF 270
DVWS ++ M G P+
Sbjct: 253 V-DVWSSCCMMLHMLNGCHPW 272
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 71 VIGIGSYATVKLATSTRHGC--DVAVKVVSKVEAPPDYLKKFLPREIDVVKGL-RHPNLI 127
VIG G++ V A + G D A+K + + + D+ + E++V+ L HPN+I
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNII 89
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYID----------------EPRTKKWFR 171
L A E +Y+ +EYA G+LLDF+++ ++ + +
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 172 QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARG---HMKCKSGHQSPLSDT 228
+ +DY ++ +HRD+ N+L+ Y K++DFG +RG ++K K+ + P+
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-KTMGRLPVR-- 206
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
+ + E L YT + SDVWS GV+L+ + + G P+
Sbjct: 207 ------WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPY 242
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 108
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 166
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 224
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 71 VIGIGSYATVKLATSTRHGC--DVAVKVVSKVEAPPDYLKKFLPREIDVVKGL-RHPNLI 127
VIG G++ V A + G D A+K + + + D+ + E++V+ L HPN+I
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNII 79
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYID----------------EPRTKKWFR 171
L A E +Y+ +EYA G+LLDF+++ ++ + +
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 172 QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARG---HMKCKSGHQSPLSDT 228
+ +DY ++ +HRD+ N+L+ Y K++DFG +RG ++K K+ + P+
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-KTMGRLPVR-- 196
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
+ + E L YT + SDVWS GV+L+ + + G P+
Sbjct: 197 ------WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPY 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 72 IGIGSYATVKL----ATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G + V L T+ G VAVK + K + P + + +EID+++ L H ++I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQH-RSGWKQEIDILRTLYHEHII 79
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E + ++MEY GSL D++ R I + + +Q+ + + Y H +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GH--MKCKSGHQSPLSDTFCGSYAYASPE 239
+HR++ N+L+D + +K+ DFG A+ GH + + SP+ + YA PE
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV-------FWYA-PE 190
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAM 263
LK + + SDVWS GV LY +
Sbjct: 191 CLKEYKFY-YASDVWSFGVTLYEL 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 72 IGIGSYATVKLATSTRHGCD-VAVKVVSKVEAPPDYLKKFLPREIDVVKGLR---HPNLI 127
IG G+Y V A ++G VA+K V +V+ + + RE+ V++ L HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 128 RFLQAIETTH-----RVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
R + ++ ++ E+ ++ + LD + G E K QL+ +D+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE-TIKDMMFQLLRGLDFL 136
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H VVHRD+K +N+L+ IKL+DFG AR + Q L+ + Y +PE+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-----SFQMALTSVVVTLW-YRAPEV 190
Query: 241 LKGVPY-TPHYSDVWSMGVVLYAMAFGRLP-FDDTNYIQLLKQVQTKVVFPTEP----NV 294
L Y TP D+WS+G + +A F R P F ++ + L ++ + P E +V
Sbjct: 191 LLQSSYATP--VDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 295 SAECKTLLSKIFSPI-KFRIRLKDIKQDPWVKTEA-NPA 331
+ + SK PI KF + ++ +D +K NPA
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPA 286
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 72 IGIGSYATVKL----ATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G G + V L T+ G VAVK + K + P + + +EID+++ L H ++I
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQH-RSGWKQEIDILRTLYHEHII 79
Query: 128 RFLQAIETTHR--VYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
++ E + ++MEY GSL D++ R I + + +Q+ + + Y H +
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR----GH--MKCKSGHQSPLSDTFCGSYAYASPE 239
+HR++ N+L+D + +K+ DFG A+ GH + + SP+ + YA PE
Sbjct: 139 IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV-------FWYA-PE 190
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAM 263
LK + + SDVWS GV LY +
Sbjct: 191 CLKEYKFY-YASDVWSFGVTLYEL 213
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA++ +S E Y ++ L REI ++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 92
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 150
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 208
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 86
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 144
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 202
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P + +++
Sbjct: 203 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNC 252
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ V A R+ VA+K +S + + + +E+ ++ LRHPN I++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDI 190
H +++MEY GS D ++ + + E + + Y H ++HRD+
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 180
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L+ +KL DFG A +P ++ F G+ + +PE++ + +
Sbjct: 181 KAGNILLSEPGLVKLGDFGSA--------SIMAP-ANXFVGTPYWMAPEVILAMDEGQYD 231
Query: 251 S--DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
DVWS+G+ +A + P + N + L +
Sbjct: 232 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 92
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVL 150
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 208
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 83 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 198
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 199 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 257
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 258 WMIDADSRPKFRELIIEFSKMARDP 282
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG GS+ V A R+ VA+K +S + + + +E+ ++ LRHPN I++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDI 190
H +++MEY GS D ++ + + E + + Y H ++HRD+
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 141
Query: 191 KCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHY 250
K N+L+ +KL DFG A +P ++ F G+ + +PE++ + +
Sbjct: 142 KAGNILLSEPGLVKLGDFGSA--------SIMAP-ANXFVGTPYWMAPEVILAMDEGQYD 192
Query: 251 S--DVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
DVWS+G+ +A + P + N + L +
Sbjct: 193 GKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
+G G + V G VA+K + +P + + L EI ++K L HPN++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL--EIQIMKKLNHPNVVSARE 79
Query: 130 ----LQAIETTHRVYIIMEYAEKGSLLDFI-QREGY--IDEPRTKKWFRQLVDAIDYCHE 182
LQ + + MEY E G L ++ Q E + E + + A+ Y HE
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 183 RGVVHRDIKCENLLID-GEYNI--KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
++HRD+K EN+++ G + K+ D G+A K Q L F G+ Y +PE
Sbjct: 140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA------KELDQGELCTEFVGTLQYLAPE 193
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+L+ YT D WS G + + G PF
Sbjct: 194 LLEQKKYTVTV-DYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 21/211 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
+G G + V G VA+K + +P + + L EI ++K L HPN++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL--EIQIMKKLNHPNVVSARE 80
Query: 130 ----LQAIETTHRVYIIMEYAEKGSLLDFI-QREGY--IDEPRTKKWFRQLVDAIDYCHE 182
LQ + + MEY E G L ++ Q E + E + + A+ Y HE
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 183 RGVVHRDIKCENLLID-GEYNI--KLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPE 239
++HRD+K EN+++ G + K+ D G+A K Q L F G+ Y +PE
Sbjct: 141 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA------KELDQGELCTEFVGTLQYLAPE 194
Query: 240 ILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
+L+ YT D WS G + + G PF
Sbjct: 195 LLEQKKYTVTV-DYWSFGTLAFECITGFRPF 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 39/246 (15%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 31 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 86
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSG 220
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIH 201
Query: 221 HQSPLSDTFCGSYA--YASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
H T G + +PE L YT H SDVWS GV+L+ + G P+ +
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 278 LLKQVQ 283
L K ++
Sbjct: 261 LFKLLK 266
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 72 IGIGSYATVKLATSTRHGCD-VAVKVVSKVEAPPDYLKKFLPREIDVVKGLR---HPNLI 127
IG G+Y V A ++G VA+K V +V+ + + RE+ V++ L HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 128 RFLQAIETTH-----RVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
R + ++ ++ E+ ++ + LD + G E K QL+ +D+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET-IKDMMFQLLRGLDFL 136
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H VVHRD+K +N+L+ IKL+DFG AR + Q L+ + Y +PE+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-----SFQMALTSVVVTLW-YRAPEV 190
Query: 241 LKGVPY-TPHYSDVWSMGVVLYAMAFGRLP-FDDTNYIQLLKQVQTKVVFPTEP----NV 294
L Y TP D+WS+G + +A F R P F ++ + L ++ + P E +V
Sbjct: 191 LLQSSYATP--VDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 295 SAECKTLLSKIFSPI-KFRIRLKDIKQDPWVKTEA-NPA 331
+ + SK PI KF + ++ +D +K NPA
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPA 286
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 83 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 198
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 199 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 258 WMIDADSRPKFRELIIEFSKMARDP 282
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 72 IGIGSYATVKLATSTRHGCD-VAVKVVSKVEAPPDYLKKFLPREIDVVKGLR---HPNLI 127
IG G+Y V A ++G VA+K V +V+ + + RE+ V++ L HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 128 RFLQAIETTH-----RVYIIMEYAEKG--SLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
R + ++ ++ E+ ++ + LD + G E K QL+ +D+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET-IKDMMFQLLRGLDFL 136
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
H VVHRD+K +N+L+ IKL+DFG AR + Q L+ + Y +PE+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-----SFQMALTSVVVTLW-YRAPEV 190
Query: 241 LKGVPY-TPHYSDVWSMGVVLYAMAFGRLP-FDDTNYIQLLKQVQTKVVFPTEP----NV 294
L Y TP D+WS+G + +A F R P F ++ + L ++ + P E +V
Sbjct: 191 LLQSSYATP--VDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 295 SAECKTLLSKIFSPI-KFRIRLKDIKQDPWVKTEA-NPA 331
+ + SK PI KF + ++ +D +K NPA
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPA 286
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 85 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 143
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 200
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 201 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 259
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 260 WMIDADSRPKFRELIIEFSKMARDP 284
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 92
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 150
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L + + Y +PEI+
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRW-YRAPEIMLNSKG 208
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 93
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VYI+ + E L + + ++ + Q++ + Y H V+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 151
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L + + Y +PEI+
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRW-YRAPEIMLNSKG 209
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 210 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 259
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYL-KKFLPREIDVVKGLRHPNLIR 128
+ +G G + V A + C+ A+K ++ P L ++ + RE+ + L HP ++R
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIK---RIRLPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 129 FLQAI---ETTHRV---------YIIMEYAEKGSLLDFIQREGYIDEPRTK---KWFRQL 173
+ A TT ++ YI M+ K +L D++ I+E F Q+
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQI 127
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT----- 228
+A+++ H +G++HRD+K N+ + +K+ DFG M Q+ L+
Sbjct: 128 AEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA-MDQDEEEQTVLTPMPAYAR 186
Query: 229 ---FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAF 265
G+ Y SPE + G Y+ H D++S+G++L+ + +
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELLY 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF-- 129
IG G+Y V A + VA+K +S E Y ++ L REI ++ RH N+I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTL-REIKILLRFRHENIIGIND 108
Query: 130 ---LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
IE VY++ G+ L + + ++ + Q++ + Y H V+
Sbjct: 109 IIRAPTIEQMKDVYLVTHLM--GADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVL 166
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+K NLL++ ++K+ DFG AR H L++ + + Y +PEI+
Sbjct: 167 HRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTE-YVATRWYRAPEIMLNSKG 224
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSA 296
D+WS+G +L M R F +Y+ L + + P++ +++
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 274
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 45/249 (18%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 31 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 86
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHM 215
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTN 274
K + + P+ + +PE L YT H SDVWS GV+L+ + G P+
Sbjct: 207 KKTTNGRLPVK--------WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 275 YIQLLKQVQ 283
+L K ++
Sbjct: 258 VEELFKLLK 266
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 45/249 (18%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 24 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 79
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 80 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHM 215
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR +
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTN 274
K + + P+ + +PE L YT H SDVWS GV+L+ + G P+
Sbjct: 200 KKTTNGRLPVK--------WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVP 250
Query: 275 YIQLLKQVQ 283
+L K ++
Sbjct: 251 VEELFKLLK 259
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 45/249 (18%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 23 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 78
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 79 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHM 215
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR +
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTN 274
K + + P+ + +PE L YT H SDVWS GV+L+ + G P+
Sbjct: 199 KKTTNGRLPVK--------WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVP 249
Query: 275 YIQLLKQVQ 283
+L K ++
Sbjct: 250 VEELFKLLK 258
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ + ++Y +R +V
Sbjct: 78 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 137 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 193
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 194 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 252
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 253 WMIDADSRPKFRELIIEFSKMARDP 277
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 45/249 (18%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 31 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 86
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHM 215
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTN 274
K + + P+ + +PE L YT H SDVWS GV+L+ + G P+
Sbjct: 207 KKTTNGRLPVK--------WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 275 YIQLLKQVQ 283
+L K ++
Sbjct: 258 VEELFKLLK 266
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G + VK R DVA+K++ + D +F+ E V+ L H L++
Sbjct: 14 KELGTGQFGVVKYG-KWRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQL 68
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD-------AIDYCHE 182
++II EY G LL+ Y+ E R + +QL++ A++Y
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA------YA 236
+ +HRD+ N L++ + +K+SDFG +R L D + S ++
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR----------YVLDDEYTSSVGSKFPVRWS 172
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD 271
PE+L ++ SD+W+ GV+++ + + G++P++
Sbjct: 173 PPEVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G + VK R DVA+K++ + D +F+ E V+ L H L++
Sbjct: 15 KELGTGQFGVVKYG-KWRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQL 69
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD-------AIDYCHE 182
++II EY G LL+ Y+ E R + +QL++ A++Y
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA------YA 236
+ +HRD+ N L++ + +K+SDFG +R L D + S ++
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR----------YVLDDEYTSSVGSKFPVRWS 173
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD 271
PE+L ++ SD+W+ GV+++ + + G++P++
Sbjct: 174 PPEVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 71 VIGIGSYATVKLATSTRHGC--DVAVKVVSKVEAPPDYLKKFLPREIDVVKGL-RHPNLI 127
VIG G++ V A + G D A+K + + + D+ + E++V+ L HPN+I
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNII 86
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYID----------------EPRTKKWFR 171
L A E +Y+ +EYA G+LLDF+++ ++ + +
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 172 QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARG---HMKCKSGHQSPLSDT 228
+ +DY ++ +HR++ N+L+ Y K++DFG +RG ++K K+ + P+
Sbjct: 147 DVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVK-KTMGRLPVR-- 203
Query: 229 FCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
+ + E L YT + SDVWS GV+L+ + + G P+
Sbjct: 204 ------WMAIESLNYSVYTTN-SDVWSYGVLLWEIVSLGGTPY 239
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G + VK R DVA+K++ + D +F+ E V+ L H L++
Sbjct: 10 KELGTGQFGVVKYG-KWRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQL 64
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD-------AIDYCHE 182
++II EY G LL+ Y+ E R + +QL++ A++Y
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA------YA 236
+ +HRD+ N L++ + +K+SDFG +R L D + S ++
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR----------YVLDDEYTSSVGSKFPVRWS 168
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD 271
PE+L ++ SD+W+ GV+++ + + G++P++
Sbjct: 169 PPEVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 45/249 (18%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 16 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 71
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 72 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHM 215
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR +
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTN 274
K + + P+ + +PE L YT H SDVWS GV+L+ + G P+
Sbjct: 192 KKTTNGRLPVK--------WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVP 242
Query: 275 YIQLLKQVQ 283
+L K ++
Sbjct: 243 VEELFKLLK 251
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 45/249 (18%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 20 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 75
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 76 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHM 215
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR +
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTN 274
K + + P+ + +PE L YT H SDVWS GV+L+ + G P+
Sbjct: 196 KKTTNGRLPVK--------WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVP 246
Query: 275 YIQLLKQVQ 283
+L K ++
Sbjct: 247 VEELFKLLK 255
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G + VK R DVA+K++ + D +F+ E V+ L H L++
Sbjct: 30 KELGTGQFGVVKYG-KWRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQL 84
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD-------AIDYCHE 182
++II EY G LL+ Y+ E R + +QL++ A++Y
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA------YA 236
+ +HRD+ N L++ + +K+SDFG +R L D + S ++
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR----------YVLDDEYTSSVGSKFPVRWS 188
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD 271
PE+L ++ SD+W+ GV+++ + + G++P++
Sbjct: 189 PPEVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G + VK R DVA+K++ + D +F+ E V+ L H L++
Sbjct: 21 KELGTGQFGVVKYG-KWRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQL 75
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD-------AIDYCHE 182
++II EY G LL+ Y+ E R + +QL++ A++Y
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEYLES 129
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA------YA 236
+ +HRD+ N L++ + +K+SDFG +R L D + S ++
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR----------YVLDDEYTSSVGSKFPVRWS 179
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD 271
PE+L ++ SD+W+ GV+++ + + G++P++
Sbjct: 180 PPEVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYE 214
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%), Gaps = 22/239 (9%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
+G++IG G + V HG +VA++++ D LK F RE+ + RH N++
Sbjct: 37 IGELIGKGRFGQV--YHGRWHG-EVAIRLIDIERDNEDQLKAF-KREVMAYRQTRHENVV 92
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYI--DEPRTKKWFRQLVDAIDYCHERGV 185
F+ A + + II KG L + R+ I D +T++ +++V + Y H +G+
Sbjct: 93 LFMGACMSPPHLAIITSLC-KGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI 151
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKG-- 243
+H+D+K +N+ D + ++DFG ++G + G + +PEI++
Sbjct: 152 LHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 244 -------VPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVS 295
+P++ H SDV+++G + Y + PF ++ Q+ T + +PN+S
Sbjct: 211 PDTEEDKLPFSKH-SDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM----KPNLS 264
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 91 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 149
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 150 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 206
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 207 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 265
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 266 WMIDADSRPKFRELIIEFSKMARDP 290
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 45/249 (18%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 72 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 127
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHM 215
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR +
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTN 274
K + + P+ + +PE L YT H SDVWS GV+L+ + G P+
Sbjct: 248 KKTTNGRLPVK--------WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVP 298
Query: 275 YIQLLKQVQ 283
+L K ++
Sbjct: 299 VEELFKLLK 307
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 84 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 199
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 200 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 258
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 259 WMIDADSRPKFRELIIEFSKMARDP 283
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 87 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 145
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 146 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 202
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 203 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 261
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 262 WMIDADSRPKFRELIIEFSKMARDP 286
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 67 VLGKVIGIGSYATVKLATS----TRHG-CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL 121
VLGK +G G + V AT+ R G VAVK++ K A P L+ L E +V+K +
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLL-SEFNVLKQV 83
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQRE-----GYI-----------DEPR 165
HP++I+ A + +I+EYA+ GSL F++ GY+ D P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 166 TKK----------WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHM 215
+ W Q+ + Y E +VHRD+ N+L+ +K+SDFG +R
Sbjct: 144 ERALTMGDLISFAW--QISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTN 274
+ S + + + E L YT SDVWS GV+L+ + G P+
Sbjct: 202 EEDSXVKRSQGRI---PVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 275 YIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDP 322
+L ++T N S E +R+ L+ KQ+P
Sbjct: 258 PERLFNLLKTGHRMERPDNCSEEM------------YRLMLQCWKQEP 293
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 45/249 (18%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCD---------VAVKVVSKVEAPPDYLKKFLPREIDV 117
VLGK +G G++ V LA + G D VAVK++ K +A L + E+++
Sbjct: 31 VLGKPLGEGAFGQVVLAEAI--GLDKDKPNRVTKVAVKML-KSDATEKDLSDLI-SEMEM 86
Query: 118 VKGL-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGY 160
+K + +H N+I L A +Y+I+EYA KG+L +++Q E
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHM 215
+ Q+ ++Y + +HRD+ N+L+ + +K++DFG AR +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTN 274
K + + P+ + +PE L YT H SDVWS GV+L+ + G P+
Sbjct: 207 KKTTNGRLPVK--------WMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 275 YIQLLKQVQ 283
+L K ++
Sbjct: 258 VEELFKLLK 266
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G + VK R DVA+K++ + D +F+ E V+ L H L++
Sbjct: 15 KELGTGQFGVVKYG-KWRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQL 69
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD-------AIDYCHE 182
++II EY G LL+ Y+ E R + +QL++ A++Y
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYA------YA 236
+ +HRD+ N L++ + +K+SDFG +R L D + S ++
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR----------YVLDDEYTSSRGSKFPVRWS 173
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD 271
PE+L ++ SD+W+ GV+++ + + G++P++
Sbjct: 174 PPEVLMYSKFSSK-SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 83 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 198
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 199 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 257
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 258 WMIDADSRPKFRELIIEFSKMARDP 282
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 81 RLL-GICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 196
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 197 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 256 WMIDADSRPKFRELIIEFSKMARDP 280
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 84 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 199
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 200 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 259 WMIDADSRPKFRELIIEFSKMARDP 283
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+ G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +IM+ G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 88 RLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 203
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 204 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 263 WMIDADSRPKFRELIIEFSKMARDP 287
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 81 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 196
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 197 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 256 WMIDADSRPKFRELIIEFSKMARDP 280
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 106 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 164
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 165 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 221
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 222 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 280
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 281 WMIDADSRPKFRELIIEFSKMARDP 305
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 88 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 203
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 204 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 263 WMIDADSRPKFRELIIEFSKMARDP 287
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 70 KVIGIGSYATV---KLATST-RHGCDVAVKVVSKVEAPPDYLKK----FLPREIDVVKGL 121
KVIG G + V L TS+ + VA+K + Y +K FL E ++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA-----GYTEKQRVDFL-GEAGIMGQF 103
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYC 180
H N+IR I + II EY E G+L F+ +++G + R + + Y
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYA 234
VHRD+ N+L++ K+SDFG +R SG + P+
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR-------- 215
Query: 235 YASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ +PE + +T SDVWS G+V++ M +G P+ + + +++K + PT
Sbjct: 216 WTAPEAISYRKFTSA-SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT 271
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 84 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 142
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 199
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 200 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 258
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 259 WMIDADSRPKFRELIIEFSKMARDP 283
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 81 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 196
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 197 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 255
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 256 WMIDADSRPKFRELIIEFSKMARDP 280
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 22/232 (9%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
K+IG G V +L + VA+K + K + FL E ++ HPN+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLS-EASIMGQFDHPNI 112
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGV 185
IR + I+ EY E GSL F++ +G + R + + Y + G
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYASPE 239
VHRD+ N+L+D K+SDFG +R +G + P+ + +PE
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR--------WTAPE 224
Query: 240 ILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ ++ SDVWS GVV++ +A+G P+ + ++ V+ P
Sbjct: 225 AIAFRTFS-SASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA 275
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 24/210 (11%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
K +G G + VK R DVA+K++ + D +F+ E V+ L H L++
Sbjct: 30 KELGTGQFGVVKYG-KWRGQYDVAIKMIKEGSMSED---EFI-EEAKVMMNLSHEKLVQL 84
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVD-------AIDYCHE 182
++II EY G LL+ Y+ E R + +QL++ A++Y
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQLLEMCKDVCEAMEYLES 138
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
+ +HRD+ N L++ + +K+SDFG +R + S + F ++ PE+L
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEETSSVGSKF--PVRWSPPEVLM 194
Query: 243 GVPYTPHYSDVWSMGVVLYAM-AFGRLPFD 271
++ SD+W+ GV+++ + + G++P++
Sbjct: 195 YSKFSSK-SDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 64/294 (21%)
Query: 67 VLGKVIGIGSYATVKLATS----TRHG-CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL 121
VLGK +G G + V AT+ R G VAVK++ K A P L+ L E +V+K +
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLL-SEFNVLKQV 83
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQRE-----GYI-----------DEPR 165
HP++I+ A + +I+EYA+ GSL F++ GY+ D P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 166 TKK----------WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR--- 212
+ W Q+ + Y E +VHRD+ N+L+ +K+SDFG +R
Sbjct: 144 ERALTMGDLISFAW--QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 213 ---GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRL 268
++K G + P+ + + E L YT SDVWS GV+L+ + G
Sbjct: 202 EEDSYVKRSQG-RIPVK--------WMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGN 251
Query: 269 PFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDP 322
P+ +L ++T N S E +R+ L+ KQ+P
Sbjct: 252 PYPGIPPERLFNLLKTGHRMERPDNCSEEM------------YRLMLQCWKQEP 293
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+VIG G + V L + VA+K + K + FL E ++ HPN+
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFL-SEASIMGQFDHPNV 96
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
I + + V II E+ E GSL F+ Q +G + R + + Y +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 156
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS---YAYASPEILK 242
VHRD+ N+L++ K+SDFG +R + P + G + +PE ++
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSR---FLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+T SDVWS G+V++ M++G P+ D ++ ++ P
Sbjct: 214 YRKFT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 260
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 52/288 (18%)
Query: 67 VLGKVIGIGSYATVKLATS----TRHG-CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL 121
VLGK +G G + V AT+ R G VAVK++ K A P L+ L E +V+K +
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLL-SEFNVLKQV 83
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQRE-----GYI-----------DEPR 165
HP++I+ A + +I+EYA+ GSL F++ GY+ D P
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 166 TKK----------WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHM 215
+ W Q+ + Y E +VHRD+ N+L+ +K+SDFG +R
Sbjct: 144 ERALTMGDLISFAW--QISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 216 KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTN 274
+ S + + + E L YT SDVWS GV+L+ + G P+
Sbjct: 202 EEDSXVKRSQGRI---PVKWMAIESLFDHIYTTQ-SDVWSFGVLLWEIVTLGGNPYPGIP 257
Query: 275 YIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDP 322
+L ++T N S E +R+ L+ KQ+P
Sbjct: 258 PERLFNLLKTGHRMERPDNCSEEM------------YRLMLQCWKQEP 293
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHG--CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G + V ++ EA K + E V+ + +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 115 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 173
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 174 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 230
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 231 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 289
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 290 WMIDADSRPKFRELIIEFSKMARDP 314
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--LPREIDVVKGLRHPNLIRF 129
+G G + V+L G + +V K P L +EI++++ L H N++++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 130 --LQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
+ + + + +IME+ GSL +++ + + I+ + K+ Q+ +DY R V
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ N+L++ E+ +K+ DFG + K SP+ + YA +
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV-------FWYAPECL 189
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM 263
++ Y SDVWS GV L+ +
Sbjct: 190 MQSKFYIA--SDVWSFGVTLHEL 210
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 75 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 133
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 134 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 190
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 191 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 249
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 250 WMIDADSRPKFRELIIEFSKMARDP 274
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--LPREIDVVKGLRHPNLIRF 129
+G G + V+L G + +V K P L +EI++++ L H N++++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 130 --LQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
+ + + + +IME+ GSL +++ + + I+ + K+ Q+ +DY R V
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEI 240
HRD+ N+L++ E+ +K+ DFG + K SP+ + YA +
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV-------FWYAPECL 201
Query: 241 LKGVPYTPHYSDVWSMGVVLYAM 263
++ Y SDVWS GV L+ +
Sbjct: 202 MQSKFYIA--SDVWSFGVTLHEL 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ K +A + L + E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEEDLSDLV-SEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 22/232 (9%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
K+IG G V +L + VA+K + K + FL E ++ HPN+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL-KAGYTERQRRDFLS-EASIMGQFDHPNI 112
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGV 185
IR + I+ EY E GSL F++ +G + R + + Y + G
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFAR------GHMKCKSGHQSPLSDTFCGSYAYASPE 239
VHRD+ N+L+D K+SDFG +R +G + P+ + +PE
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR--------WTAPE 224
Query: 240 ILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ ++ SDVWS GVV++ +A+G P+ + ++ V+ P
Sbjct: 225 AIAFRTFSSA-SDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA 275
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ D L E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 83 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 141
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 198
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 199 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKC 257
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 258 WMIDADSRPKFRELIIEFSKMARDP 282
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Query: 113 REIDVVKGLRHPNLIRFLQAIETTH---RVYIIMEYAEKGSLLDFIQ-------REGYID 162
REI +++ L+HPN+I LQ + +H +V+++ +YAE L I+ + +
Sbjct: 67 REIALLRELKHPNVIS-LQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQ 124
Query: 163 EPR--TKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGE----YNIKLSDFGFARGHMK 216
PR K Q++D I Y H V+HRD+K N+L+ GE +K++D GFAR
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR---- 180
Query: 217 CKSGHQSPLSDT--FCGSYAYASPEILKGVPYTPHYSDVWSMGVVL 260
+ PL+D ++ Y +PE+L G + D+W++G +
Sbjct: 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIF 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 93 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 203
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 204 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 93 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 151
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 203
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 204 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 231
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 73 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 183
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 184 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 211
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 77 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 187
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 188 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 91 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 149
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 150 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 201
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 202 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 229
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 83 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 141
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 193
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 194 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 221
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ D L E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 101/203 (49%), Gaps = 6/203 (2%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 77 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 135
Query: 189 DIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTP 248
D+ N+L+ ++ K+SDFG ++ ++ +++ + + +PE + ++
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW--PVKWYAPECINYYKFSS 193
Query: 249 HYSDVWSMGVVLY-AMAFGRLPF 270
SDVWS GV+++ A ++G+ P+
Sbjct: 194 K-SDVWSFGVLMWEAFSYGQKPY 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 71 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 129
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 130 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 181
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 182 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 209
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSG 220
EPR + Q+V +++ H+R +++RD+K EN+L+D + N+++SD G A ++ K+G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAG 342
Query: 221 HQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF---DDTNYIQ 277
+ + G+ + +PE+L G Y D +++GV LY M R PF + +
Sbjct: 343 QTK--TKGYAGTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 278 LLKQ--VQTKVVFPTE--PNVSAECKTLLSK 304
LKQ ++ V +P + P C+ LL K
Sbjct: 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 88 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 203
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 204 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 263 WMIDADSRPKFRELIIEFSKMARDP 287
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 436 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 494
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 495 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 546
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 547 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 574
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 127/288 (44%), Gaps = 36/288 (12%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K + + P RE+
Sbjct: 55 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ--DCPKAR------REV 105
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ E + G L IQ G E +
Sbjct: 106 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASE 165
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K + H S
Sbjct: 166 IXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTSHNS-- 219
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
T C + Y +PE+L Y D WS+GV+ Y + G PF + + + +T+
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKS-CDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTR 278
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R + + PW+
Sbjct: 279 IRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQ-RXTITEFXNHPWI 325
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL-RHP 124
+ L +++G G+Y V + G A+KV+ + +K+ EI+++K H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ----EINMLKKYSHHR 81
Query: 125 NLIRFLQAI------ETTHRVYIIMEYAEKGSLLDFIQ--REGYIDEPRTKKWFRQLVDA 176
N+ + A +++++ME+ GS+ D I+ + + E R+++
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 177 IDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYA 236
+ + H+ V+HRDIK +N+L+ +KL DFG + + G + +TF G+ +
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS-AQLDRTVGRR----NTFIGTPYWM 196
Query: 237 SPEILKGVPYTPHY-----SDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
+PE++ P SD+WS+G+ MA G P D + ++ L
Sbjct: 197 APEVI-ACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 25/232 (10%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR-HPNLIR 128
+V+ G +A V A G + A+K + E + + + +E+ +K L HPN+++
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN---RAIIQEVCFMKKLSGHPNIVQ 90
Query: 129 FLQAI-------ETTHRVYIIMEYAEKGSLLDFIQR---EGYIDEPRTKKWFRQLVDAID 178
F A +T ++++ KG L++F+++ G + K F Q A+
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 179 YCHERG--VVHRDIKCENLLIDGEYNIKLSDFGFAR--GHMK--CKSGHQSPLSD---TF 229
+ H + ++HRD+K ENLL+ + IKL DFG A H S + L + T
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 230 CGSYAYASPEILKGVPYTP--HYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
+ Y +PEI+ P D+W++G +LY + F + PF+D ++++
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSG 220
EPR + Q+V +++ H+R +++RD+K EN+L+D + N+++SD G A ++ K+G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAG 342
Query: 221 HQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF---DDTNYIQ 277
+ + G+ + +PE+L G Y D +++GV LY M R PF + +
Sbjct: 343 QTK--TKGYAGTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 278 LLKQ--VQTKVVFPTE--PNVSAECKTLLSK 304
LKQ ++ V +P + P C+ LL K
Sbjct: 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 18/209 (8%)
Query: 70 KVIGIGSYATVKLAT-STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
K +G G++ TVK + + K EA LK L E +V++ L +P ++R
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHR 188
+ E + ++ME AE G L ++Q+ ++ + + Q+ + Y E VHR
Sbjct: 435 MIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493
Query: 189 DIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEILK 242
D+ N+L+ ++ K+SDFG ++ + K ++ + P+ + +PE +
Sbjct: 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK--------WYAPECIN 545
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
++ SDVWS GV+++ A ++G+ P+
Sbjct: 546 YYKFSSK-SDVWSFGVLMWEAFSYGQKPY 573
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ D L E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSG 220
EPR + Q+V +++ H+R +++RD+K EN+L+D + N+++SD G A ++ K+G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAG 342
Query: 221 HQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF---DDTNYIQ 277
+ + G+ + +PE+L G Y D +++GV LY M R PF + +
Sbjct: 343 QTK--TKGYAGTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 278 LLKQ--VQTKVVFPTE--PNVSAECKTLLSK 304
LKQ ++ V +P + P C+ LL K
Sbjct: 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+G G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 81 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 196
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 197 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 256 WMIDADSRPKFRELIIEFSKMARDP 280
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ D L E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G + V +A + + VAVK++ D L E++++K
Sbjct: 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 142
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 143 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 263 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313
Query: 278 LLKQVQ 283
L K ++
Sbjct: 314 LFKLLK 319
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
IG G + V L VA+K + + + D+++ E +V+ L HP L++
Sbjct: 15 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLY 68
Query: 131 QAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ ++ E+ E G L D+++ + G + + + Y E V+HRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+ N L+ IK+SDFG R +G + P+ +ASPE+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--------WASPEVFSFSR 180
Query: 246 YTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQT 284
Y+ SDVWS GV+++ + G++P+++ + ++++ + T
Sbjct: 181 YSSK-SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 219
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 161 IDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSG 220
EPR + Q+V +++ H+R +++RD+K EN+L+D + N+++SD G A ++ K+G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAG 342
Query: 221 HQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF---DDTNYIQ 277
+ + G+ + +PE+L G Y D +++GV LY M R PF + +
Sbjct: 343 QTK--TKGYAGTPGFMAPELLLGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENK 399
Query: 278 LLKQ--VQTKVVFPTE--PNVSAECKTLLSK 304
LKQ ++ V +P + P C+ LL K
Sbjct: 400 ELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G + V +A + + VAVK++ D L E++++K
Sbjct: 31 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 88
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 89 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 149 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 209 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 278 LLKQVQ 283
L K ++
Sbjct: 260 LFKLLK 265
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ D L E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G + V +A + + VAVK++ D L E++++K
Sbjct: 26 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 83
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 84 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 144 KDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 204 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 278 LLKQVQ 283
L K ++
Sbjct: 255 LFKLLK 260
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G + V +A + + VAVK++ D L E++++K
Sbjct: 28 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 85
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 86 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 146 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 206 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 278 LLKQVQ 283
L K ++
Sbjct: 257 LFKLLK 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
IG G + V L VA+K + + + D+++ E +V+ L HP L++
Sbjct: 13 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLY 66
Query: 131 QAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ ++ E+ E G L D+++ + G + + + Y E V+HRD
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+ N L+ IK+SDFG R +G + P+ +ASPE+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--------WASPEVFSFSR 178
Query: 246 YTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQT 284
Y+ SDVWS GV+++ + G++P+++ + ++++ + T
Sbjct: 179 YSSK-SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 217
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
IG G + V L VA+K + + + D+++ E +V+ L HP L++
Sbjct: 15 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLY 68
Query: 131 QAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ ++ E+ E G L D+++ + G + + + Y E V+HRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+ N L+ IK+SDFG R +G + P+ +ASPE+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--------WASPEVFSFSR 180
Query: 246 YTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQT 284
Y+ SDVWS GV+++ + G++P+++ + ++++ + T
Sbjct: 181 YSSK-SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 219
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G + V L VA+K + + D F+ E +V+ L HP L++
Sbjct: 35 IGSGQFGLVHLGYWLNKD-KVAIKTIKEGSMSED---DFI-EEAEVMMKLSHPKLVQLYG 89
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDI 190
+ ++ E+ E G L D+++ + G + + + Y E V+HRD+
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 149
Query: 191 KCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
N L+ IK+SDFG R +G + P+ +ASPE+ Y
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--------WASPEVFSFSRY 201
Query: 247 TPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQT 284
+ SDVWS GV+++ + G++P+++ + ++++ + T
Sbjct: 202 SSK-SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 239
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ D L E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+EYA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ ++++DFG AR + K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
IG G + V L VA+K + + + D+++ E +V+ L HP L++
Sbjct: 18 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLY 71
Query: 131 QAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ ++ E+ E G L D+++ + G + + + Y E V+HRD
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 131
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+ N L+ IK+SDFG R +G + P+ +ASPE+
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--------WASPEVFSFSR 183
Query: 246 YTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQT 284
Y+ SDVWS GV+++ + G++P+++ + ++++ + T
Sbjct: 184 YSSK-SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+ G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 81 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 139
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 196
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 197 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 255
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 256 WMIDADSRPKFRELIIEFSKMARDP 280
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV--EAPPDYLKKFLPREIDVVKGLRHPNLI 127
KV+ G++ TV G V + V K EA K + E V+ + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L I T V +I + G LLD++ + + I W Q+ ++Y +R +V
Sbjct: 88 RLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLV 146
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPY 246
HRD+ N+L+ ++K++DFG A+ + + + A S IL + Y
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES--ILHRI-Y 203
Query: 247 TPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKI 305
T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 204 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 262
Query: 306 F-----SPIKFR---IRLKDIKQDP 322
+ S KFR I + +DP
Sbjct: 263 WMIDADSRPKFRELIIEFSKMARDP 287
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 67 VLGKVIGIGSYATVKLATSTRHG---CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRH 123
VL +++G G + V T H +VAVK K + D +KF+ + ++K L H
Sbjct: 11 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAV-IMKNLDH 68
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR-QLVDAIDYCHE 182
P++++ + IE +IIME G L +++R + T + Q+ A+ Y
Sbjct: 69 PHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 127
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VHRDI N+L+ +KL DFG +R +++ + +++ ++ + SPE +
Sbjct: 128 INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRL---PIKWMSPESIN 183
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPF 270
+T SDVW V ++ ++FG+ PF
Sbjct: 184 FRRFTTA-SDVWMFAVCMWEILSFGKQPF 211
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 14/228 (6%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+VIG G + V L + VA+K + K + FL E ++ HPN+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTL-KSGYTEKQRRDFL-SEASIMGQFDHPNV 70
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
I + + V II E+ E GSL F+ Q +G + R + + Y +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 130
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS---YAYASPEILK 242
VHR + N+L++ K+SDFG +R + P + G + +PE ++
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSR---FLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 243 GVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFP 289
+T SDVWS G+V++ M++G P+ D ++ ++ P
Sbjct: 188 YRKFT-SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 234
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSK-VEAPPDYLKKFLPREIDVVKGLRHPNLIRFL 130
IG G + V L VA+K + + + D+++ E +V+ L HP L++
Sbjct: 16 IGSGQFGLVHLGYWLNKD-KVAIKTIREGAMSEEDFIE-----EAEVMMKLSHPKLVQLY 69
Query: 131 QAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVHRD 189
+ ++ E+ E G L D+++ + G + + + Y E V+HRD
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129
Query: 190 IKCENLLIDGEYNIKLSDFGFAR----GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+ N L+ IK+SDFG R +G + P+ +ASPE+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--------WASPEVFSFSR 181
Query: 246 YTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQT 284
Y+ SDVWS GV+++ + G++P+++ + ++++ + T
Sbjct: 182 YSSK-SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 220
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 67 VLGKVIGIGSYATVKLATSTRHG---CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRH 123
VL +++G G + V T H +VAVK K + D +KF+ + ++K L H
Sbjct: 27 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAV-IMKNLDH 84
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR-QLVDAIDYCHE 182
P++++ + IE +IIME G L +++R + T + Q+ A+ Y
Sbjct: 85 PHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 143
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VHRDI N+L+ +KL DFG +R +++ + +++ ++ + SPE +
Sbjct: 144 INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRL---PIKWMSPESIN 199
Query: 243 GVPYTPHYSDVWSMGVVLYA-MAFGRLPF 270
+T SDVW V ++ ++FG+ PF
Sbjct: 200 FRRFTTA-SDVWMFAVCMWEILSFGKQPF 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 67 VLGKVIGIGSYATVKLATSTRHG---CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRH 123
VL +++G G + V T H +VAVK K + D +KF+ + ++K L H
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-DCTLDNKEKFMSEAV-IMKNLDH 72
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFR-QLVDAIDYCHE 182
P++++ + IE +IIME G L +++R + T + Q+ A+ Y
Sbjct: 73 PHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
VHRDI N+L+ +KL DFG +R +++ + +++ ++ + SPE +
Sbjct: 132 INCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRL---PIKWMSPESIN 187
Query: 243 GVPYTPHYSDVWSMGVVLYA-MAFGRLPF 270
+T SDVW V ++ ++FG+ PF
Sbjct: 188 FRRFTTA-SDVWMFAVCMWEILSFGKQPF 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 11/242 (4%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKV---EAPPDYLKKFLPREIDVVKGLRHPNL 126
KV+G G++ TV G +V + V KV P K+ L E V+ G+ P +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEIL-DEAYVMAGVGSPYV 81
Query: 127 IRFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGV 185
R L I T V ++ + G LLD + + G + W Q+ + Y + +
Sbjct: 82 SRLL-GICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRL 140
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
VHRD+ N+L+ ++K++DFG AR ++ + +D + + E +
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH---ADGGKVPIKWMALESILRRR 197
Query: 246 YTPHYSDVWSMGVVLYA-MAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSK 304
+T H SDVWS GV ++ M FG P+D ++ ++ P P + + ++ K
Sbjct: 198 FT-HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVK 256
Query: 305 IF 306
+
Sbjct: 257 CW 258
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCD-----VAVKVVSKVEAPPDYLKKFLPREIDVVKGL- 121
GK +G G++ V AT+ G + VAVK++ + K+ L E+ ++ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLG 107
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYID---------EPRTKKWFR- 171
+H N++ L A V +I EY G LL+F++R+ D E R F
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 172 QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMK-----CKSGHQSPLS 226
Q+ + + + +HRD+ N+L+ + K+ DFG AR M K + P+
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 227 DTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
+ +PE + YT SDVWS G++L+ + + G P+
Sbjct: 228 --------WMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPY 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 68 LGKVIGIGSYATVKLATSTRHG-----CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL- 121
GK +G G++ V AT+ G VAVK++ + K+ L E+ ++ L
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLG 99
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYID---------EPRTKKWFR- 171
+H N++ L A V +I EY G LL+F++R+ D E R F
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 172 QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMK-----CKSGHQSPLS 226
Q+ + + + +HRD+ N+L+ + K+ DFG AR M K + P+
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 227 DTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
+ +PE + YT SDVWS G++L+ + + G P+
Sbjct: 220 --------WMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPY 255
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEY-NIKLSDFGFA 211
DF Q + + + + +L+ A+DYCH +G++HRD+K N++ID + ++L D+G A
Sbjct: 121 DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA 180
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + + S + PE+L + D+WS+G +L +M F R PF
Sbjct: 181 EFY------HPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFF 234
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 235 HGQDNYDQLVR 245
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ D L E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+ YA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEY-NIKLSDFGFA 211
DF Q + + + + +L+ A+DYCH +G++HRD+K N++ID + ++L D+G A
Sbjct: 126 DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA 185
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + + S + PE+L + D+WS+G +L +M F R PF
Sbjct: 186 EFY------HPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFF 239
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 240 HGQDNYDQLVR 250
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 68 LGKVIGIGSYATVKLATST-------RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKG 120
LGK +G G++ V +A + + VAVK++ D L E++++K
Sbjct: 39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD--LVSEMEMMKM 96
Query: 121 L-RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ------REGYID---EPRTKKWF 170
+ +H N+I L A +Y+I+ YA KG+L ++++ E D P + F
Sbjct: 97 IGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 171 R-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ QL ++Y + +HRD+ N+L+ +K++DFG AR + K
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFDDTNYIQ 277
+ + P+ + +PE L YT H SDVWS GV+++ + G P+ +
Sbjct: 217 TNGRLPVK--------WMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 278 LLKQVQ 283
L K ++
Sbjct: 268 LFKLLK 273
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 21/238 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G++ V A + G VA+K V +E + REI +++ L+H N++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 132 AIETTHR--------VYIIMEYAEK--GSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
T +Y++ ++ E LL + + + E K+ + L++ + Y H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIH 142
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
++HRD+K N+LI + +KL+DFG AR K+ + + + Y PE+L
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW-YRPPELL 201
Query: 242 KGV-PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ----LLKQVQTKVVFPTEPNV 294
G Y P D+W G ++ M + R P N Q L+ Q+ + PNV
Sbjct: 202 LGERDYGPPI-DLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 257
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 112/246 (45%), Gaps = 24/246 (9%)
Query: 72 IGIGSYATVKLAT--STRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRF 129
+G G++ +V+ + DVA+KV+ + D + + RE ++ L +P ++R
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD--TEEMMREAQIMHQLDNPYIVRL 75
Query: 130 LQAIETTHRVYIIMEYAEKGSLLDFI--QREGYIDEPRTKKWFRQLVDAIDYCHERGVVH 187
+ + + ++ME A G L F+ +RE I + Q+ + Y E+ VH
Sbjct: 76 I-GVCQAEALMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 188 RDIKCENLLIDGEYNIKLSDFGFARG------HMKCKSGHQSPLSDTFCGSYAYASPEIL 241
RD+ N+L+ + K+SDFG ++ + +S + PL + +PE +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK--------WYAPECI 185
Query: 242 KGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKT 300
++ SDVWS GV ++ A+++G+ P+ +++ ++ P E
Sbjct: 186 NFRKFSSR-SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA 244
Query: 301 LLSKIF 306
L+S +
Sbjct: 245 LMSDCW 250
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVK--VVSKVEAPPDYLKKF--LPREIDVVKGLRHPN 125
K IG G + V + VA+K ++ E + ++KF RE+ ++ L HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKW---FRQLVD---AIDY 179
+++ + R ++ME+ G L + +D+ KW R ++D I+Y
Sbjct: 85 IVKLYGLMHNPPR--MVMEFVPCGDLYHRL-----LDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 180 CHERG--VVHRDIKCENLLI-----DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
+ +VHRD++ N+ + + K++DFG ++ + SG G+
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG--------LLGN 189
Query: 233 YAYASPEILKGV--PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNY--IQLLKQVQTKVVF 288
+ + +PE + YT +D +S ++LY + G PFD+ +Y I+ + ++ + +
Sbjct: 190 FQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 289 PTEP 292
PT P
Sbjct: 249 PTIP 252
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 69 GKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR 128
G+V+G G + T G + +K + + + + + FL +E+ V++ L HPN+++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE--ETQRTFL-KEVKVMRCLEHPNVLK 71
Query: 129 FLQAIETTHRVYIIMEYAEKGSLLDFIQ-REGYIDEPRTKKWFRQLVDAIDYCHERGVVH 187
F+ + R+ I EY + G+L I+ + + + + + + Y H ++H
Sbjct: 72 FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 188 RDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLS---------DTFCGSYAYASP 238
RD+ N L+ N+ ++DFG AR + K+ + S T G+ + +P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 239 EILKGVPYTPHYSDVWSMGVVL 260
E++ G Y DV+S G+VL
Sbjct: 192 EMINGRSYD-EKVDVFSFGIVL 212
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 196
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 65 GYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y++ +IG GSY V LA +VA+K V+++ K+ L REI ++ L+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL-REITILNRLKSD 85
Query: 125 NLIRFLQAI-----ETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
+IR I +YI++E A+ L + ++ E K L+ ++
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR 212
HE G++HRD+K N L++ + ++K+ DFG AR
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
P ++ A T ++ I++ G L + + G E + + +++ +++ H R
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL-K 242
VV+RD+K N+L+D ++++SD G A C + P + G++ Y +PE+L K
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASV--GTHGYMAPEVLQK 364
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
GV Y +D +S+G +L+ + G PF
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPF 391
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 197
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
P ++ A T ++ I++ G L + + G E + + +++ +++ H R
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 310
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL-K 242
VV+RD+K N+L+D ++++SD G A C + P + G++ Y +PE+L K
Sbjct: 311 FVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASV--GTHGYMAPEVLQK 363
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
GV Y +D +S+G +L+ + G PF
Sbjct: 364 GVAYDSS-ADWFSLGCMLFKLLRGHSPF 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
P ++ A T ++ I++ G L + + G E + + +++ +++ H R
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL-K 242
VV+RD+K N+L+D ++++SD G A C + P + G++ Y +PE+L K
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASV--GTHGYMAPEVLQK 364
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
GV Y +D +S+G +L+ + G PF
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPF 391
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 197
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 198 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCHER 183
P ++ A T ++ I++ G L + + G E + + +++ +++ H R
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL-K 242
VV+RD+K N+L+D ++++SD G A C + P + G++ Y +PE+L K
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASV--GTHGYMAPEVLQK 364
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPF 270
GV Y +D +S+G +L+ + G PF
Sbjct: 365 GVAYDSS-ADWFSLGCMLFKLLRGHSPF 391
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 163
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 217
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 218 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 259
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 196
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 196
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 18/180 (10%)
Query: 114 EIDVV-KGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR--EGYIDEPRTKKWF 170
++DVV K P +++ T V+I ME G+ + +++ +G I E K
Sbjct: 73 DLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMT 130
Query: 171 RQLVDAIDYCHER-GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF 229
+V A+ Y E+ GV+HRD+K N+L+D IKL DFG + + K+ D
Sbjct: 131 VAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA------KDRS 184
Query: 230 CGSYAYASPE-ILKGVPYTPHY---SDVWSMGVVLYAMAFGRLPFDD--TNYIQLLKQVQ 283
G AY +PE I P P Y +DVWS+G+ L +A G+ P+ + T++ L K +Q
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 144
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 198
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 199 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 240
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 196
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 196
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 124 PNLIRFLQAIETTHRVY--IIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
PN+++ L + H +I EY DF + + + + +L+ A+DYCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNT---DFKVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 182 ERGVVHRDIKCENLLIDGEYN-IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
+G++HRD+K N++ID E ++L D+G A + K + S F G PE+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG------PEL 196
Query: 241 LKGVPYTPHYSDVWSMGVVLYAMAFGRLPF--DDTNYIQLLK 280
L + + D+WS+G + M F + PF N+ QL+K
Sbjct: 197 LVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 21/238 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G++ V A + G VA+K V +E + REI +++ L+H N++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 132 AIETTHR--------VYIIMEYAEK--GSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
T +Y++ ++ E LL + + + E K+ + L++ + Y H
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIH 142
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
++HRD+K N+LI + +KL+DFG AR K+ + + + Y PE+L
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW-YRPPELL 201
Query: 242 KGV-PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ----LLKQVQTKVVFPTEPNV 294
G Y P D+W G ++ M + R P N Q L+ Q+ + PNV
Sbjct: 202 LGERDYGPPI-DLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 257
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 21/238 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G++ V A + G VA+K V +E + REI +++ L+H N++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 132 AIETTHR--------VYIIMEYAEK--GSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
T +Y++ ++ E LL + + + E K+ + L++ + Y H
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIH 142
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
++HRD+K N+LI + +KL+DFG AR K+ + + + Y PE+L
Sbjct: 143 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW-YRPPELL 201
Query: 242 KGV-PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ----LLKQVQTKVVFPTEPNV 294
G Y P D+W G ++ M + R P N Q L+ Q+ + PNV
Sbjct: 202 LGERDYGPPI-DLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 257
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N+LID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 21/238 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ 131
IG G++ V A + G VA+K V +E + REI +++ L+H N++ ++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 132 AIETTHR--------VYIIMEYAEK--GSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
T +Y++ ++ E LL + + + E K+ + L++ + Y H
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLNGLYYIH 141
Query: 182 ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
++HRD+K N+LI + +KL+DFG AR K+ + + + Y PE+L
Sbjct: 142 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW-YRPPELL 200
Query: 242 KGV-PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQ----LLKQVQTKVVFPTEPNV 294
G Y P D+W G ++ M + R P N Q L+ Q+ + PNV
Sbjct: 201 LGERDYGPPI-DLWGAGCIMAEM-WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 256
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 123/270 (45%), Gaps = 25/270 (9%)
Query: 49 ANKRDVKKKSTVMENHGYVLGKV-IGIGSYATVKLAT--STRHGCDVAVKVVSKVEAPPD 105
++ ++K K ++ ++ + +G G++ +V+ + DVA+KV+ + D
Sbjct: 320 SDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD 379
Query: 106 YLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI--QREGYIDE 163
+ + RE ++ L +P ++R + + + ++ME A G L F+ +RE I
Sbjct: 380 --TEEMMREAQIMHQLDNPYIVRLI-GVCQAEALMLVMEMAGGGPLHKFLVGKREE-IPV 435
Query: 164 PRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARG------HMKC 217
+ Q+ + Y E+ VHR++ N+L+ + K+SDFG ++ +
Sbjct: 436 SNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495
Query: 218 KSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTNYI 276
+S + PL + +PE + ++ SDVWS GV ++ A+++G+ P+
Sbjct: 496 RSAGKWPLK--------WYAPECINFRKFSSR-SDVWSYGVTMWEALSYGQKPYKKMKGP 546
Query: 277 QLLKQVQTKVVFPTEPNVSAECKTLLSKIF 306
+++ ++ P E L+S +
Sbjct: 547 EVMAFIEQGKRMECPPECPPELYALMSDCW 576
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCD-----VAVKVVSKVEAPPDYLKKFLPREIDVVKGL- 121
GK +G G++ V AT+ G + VAVK++ + K+ L E+ ++ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLG 107
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDE-----------PRTKKWF 170
+H N++ L A V +I EY G LL+F++R+ + E T+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167
Query: 171 R---QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMK-----CKSGHQ 222
Q+ + + + +HRD+ N+L+ + K+ DFG AR M K +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 223 SPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
P+ + +PE + YT SDVWS G++L+ + + G P+
Sbjct: 228 LPVK--------WMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPY 267
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 12/231 (5%)
Query: 58 STVMENHGYVLGKVIGIG--SYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
S + E Y L VIG G TV LA G V V+ ++ +EA + + FL E+
Sbjct: 3 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN-LEACSNEMVTFLQGEL 61
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQL 173
V K HPN++ + + ++++ + GS D I ++E + +
Sbjct: 62 HVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGV 121
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF---- 229
+ A+DY H G VHR +K ++LI + + LS G G + + F
Sbjct: 122 LKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYS 179
Query: 230 CGSYAYASPEIL-KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
+ SPE+L + + SD++S+G+ +A G +PF D Q+L
Sbjct: 180 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML 230
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 38/296 (12%)
Query: 44 STLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP 103
++++ N + + E + + ++ G G++ TV+L G VA+K V ++ P
Sbjct: 3 GSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV--IQDP 60
Query: 104 PDYLKKFLPREIDVVKGL---RHPNLIR----FLQAIETTHR---VYIIMEYAEKG---S 150
+F RE+ +++ L HPN+++ F E R + ++MEY
Sbjct: 61 -----RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRC 115
Query: 151 LLDFIQREGYIDEPRTKKWFRQLVDAIDYCH--ERGVVHRDIKCENLLI-DGEYNIKLSD 207
++ +R+ K + QL+ +I H V HRDIK N+L+ + + +KL D
Sbjct: 116 CRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD 175
Query: 208 FGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGR 267
FG A+ K P C Y Y +PE++ G + D+WS+G + M G
Sbjct: 176 FGSAK-----KLSPSEPNVAYICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
Query: 268 LPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPIKFRIRLKDIKQDPW 323
F N L ++ + P+ + +L K+ +P + L + K PW
Sbjct: 230 PIFRGDNSAGQLHEIVRVLGCPS--------REVLRKL-NPSHTDVDLYNSKGIPW 276
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVK--VVSKVEAPPDYLKKF--LPREIDVVKGLRHPN 125
K IG G + V + VA+K ++ E + ++KF RE+ ++ L HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKW---FRQLVD---AIDY 179
+++ + R ++ME+ G L + +D+ KW R ++D I+Y
Sbjct: 85 IVKLYGLMHNPPR--MVMEFVPCGDLYHRL-----LDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 180 CHERG--VVHRDIKCENLLI-----DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
+ +VHRD++ N+ + + K++DFG ++ + SG G+
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG--------LLGN 189
Query: 233 YAYASPEILKGV--PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNY--IQLLKQVQTKVVF 288
+ + +PE + YT +D +S ++LY + G PFD+ +Y I+ + ++ + +
Sbjct: 190 FQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 289 PTEP 292
PT P
Sbjct: 249 PTIP 252
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 18/280 (6%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y++ + +G G + V T K V KV+ L K +EI ++ RH N
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVK---KEISILNIARHRN 62
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVDAIDYCHERG 184
++ ++ E+ + +I E+ + + I + ++E + Q+ +A+ + H
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 185 VVHRDIKCENLLIDGEYN--IKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILK 242
+ H DI+ EN++ + IK+ +FG AR + K G L T + Y +PE+ +
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQAR---QLKPGDNFRLLFT---APEYYAPEVHQ 176
Query: 243 GVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQ-TKVVFPTEP--NVSAECK 299
+D+WS+G ++Y + G PF Q+++ + + F E +S E
Sbjct: 177 H-DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235
Query: 300 TLLSKIF-SPIKFRIRLKDIKQDPWVKTEANPAASAGVET 338
+ ++ K R+ + Q PW+K + ++ + T
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRT 275
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 12/231 (5%)
Query: 58 STVMENHGYVLGKVIGIG--SYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
S + E Y L VIG G TV LA G V V+ ++ +EA + + FL E+
Sbjct: 19 SFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN-LEACSNEMVTFLQGEL 77
Query: 116 DVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY--IDEPRTKKWFRQL 173
V K HPN++ + + ++++ + GS D I ++E + +
Sbjct: 78 HVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGV 137
Query: 174 VDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF---- 229
+ A+DY H G VHR +K ++LI + + LS G G + + F
Sbjct: 138 LKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYS 195
Query: 230 CGSYAYASPEIL-KGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLL 279
+ SPE+L + + SD++S+G+ +A G +PF D Q+L
Sbjct: 196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML 246
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 68 LGKVIGIGSYATVKLATSTRHG-----CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL- 121
GK +G G++ V AT+ G VAVK++ + K+ L E+ ++ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLG 107
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEP-----------RTKKWF 170
+H N++ L A V +I EY G LL+F++R+ + E T+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 171 R---QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMK-----CKSGHQ 222
Q+ + + + +HRD+ N+L+ + K+ DFG AR M K +
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227
Query: 223 SPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
P+ + +PE + YT SDVWS G++L+ + + G P+
Sbjct: 228 LPVK--------WMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPY 267
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 65 GYVLGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL 121
Y KVIG GS+ V KL S +VA+K V + K+F RE+ +++ +
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESD----EVAIKKVLQD-------KRFKNRELQIMRIV 89
Query: 122 RHPNLIR----FLQAIETTHRVYI--IMEYAEKG---SLLDFIQREGYIDEPRTKKWFRQ 172
+HPN++ F + V++ ++EY + + + + + + K + Q
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNI-KLSDFGFARGHMKCKSGHQSPLSDTFCG 231
L+ ++ Y H G+ HRDIK +NLL+D + KL DFG A+ + + P C
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE-----PNVSXICS 204
Query: 232 SYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQV 282
Y Y +PE++ G D+WS G V+ + G+ F + I L ++
Sbjct: 205 RY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEI 254
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 120 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 180 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 233
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 234 HGHDNYDQLVR 244
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 125 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 184
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 185 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 238
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 239 HGHDNYDQLVR 249
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 119 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 179 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 233 HGHDNYDQLVR 243
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 119 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 179 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 233 HGHDNYDQLVR 243
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 153 DFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN-IKLSDFGFA 211
DF Q + + + + +++ A+DYCH G++HRD+K N++ID E+ ++L D+G A
Sbjct: 118 DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177
Query: 212 RGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPF- 270
+ H + S + PE+L + D+WS+G +L +M F + PF
Sbjct: 178 EFY------HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 231
Query: 271 -DDTNYIQLLK 280
NY QL++
Sbjct: 232 HGHDNYDQLVR 242
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 129/279 (46%), Gaps = 34/279 (12%)
Query: 12 ENIKTDTIAQSSKENKRPKSSSNKLDLDASSRS-TLIAANKRDVKKKSTVMENHGYVLGK 70
E + T ++ EN + + N + +D S+ + L+ A + V S+++ + +
Sbjct: 41 EELSTSLYKKAGSENLYFQGA-NTVHIDLSALNPELVQAVQHVVIGPSSLIVH----FNE 95
Query: 71 VIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
VIG G + V L + AVK ++++ + + +FL I ++K HPN++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNVL 153
Query: 128 RFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYCHER 183
L + + +++ Y + G L +FI+ E + P K Q+ + + +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASK 211
Query: 184 GVVHRDIKCENLLIDGEYNIKLSDFGFAR-------GHMKCKSGHQSPLSDTFCGSYAYA 236
VHRD+ N ++D ++ +K++DFG AR + K+G + P+ +
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WM 263
Query: 237 SPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 264 ALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 301
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPN 125
Y + +IG GSY V A VA+K + +V K+ L REI ++ L H +
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRIL-REIAILNRLNHDH 113
Query: 126 LIRFL-----QAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYC 180
+++ L + +E +Y+++E A+ + Y+ E K L+ + Y
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSG-------------------H 221
H G++HRD+K N L++ + ++K+ DFG AR ++G H
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 222 QSPLSDTFCGSYA---YASPEILKGVPYTPHYSDVWSMGVVL 260
L G Y +PE++ DVWS+G +
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIF 274
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 90
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL 148
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-------HMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK------- 201
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 202 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLI 127
L + +G G Y V HG VAVK+ S D F EI LRH N++
Sbjct: 12 LVECVGKGRYGEV--WRGLWHGESVAVKIFSS----RDEQSWFRETEIYNTVLLRHDNIL 65
Query: 128 RFLQAIETTH----RVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDA---IDYC 180
F+ + T+ ++++I Y E GSL DF+QR+ EP R V A + +
Sbjct: 66 GFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTL--EPHLA--LRLAVSAACGLAHL 121
Query: 181 H--------ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
H + + HRD K N+L+ ++D G A H + S + ++ G+
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ-GSDYLDIGNNPRVGT 180
Query: 233 YAYASPEILKGVPYTP-----HYSDVWSMGVVLYAMA 264
Y +PE+L T ++D+W+ G+VL+ +A
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 91
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL 149
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-------HMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------- 202
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 203 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 33/259 (12%)
Query: 32 SSNKLDLDASSRS-TLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATV---KLATSTR 87
SN + +D S+ + L+ A + V S+++ + +VIG G + V L +
Sbjct: 6 GSNTVHIDLSALNPELVQAVQHVVIGPSSLIVH----FNEVIGRGHFGCVYHGTLLDNDG 61
Query: 88 HGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ-AIETTHRVYIIMEYA 146
AVK ++++ + + +FL I ++K HPN++ L + + +++ Y
Sbjct: 62 KKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 119
Query: 147 EKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI 203
+ G L +FI+ E + P K Q+ + + + VHRD+ N ++D ++ +
Sbjct: 120 KHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 177
Query: 204 KLSDFGFAR-------GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSM 256
K++DFG AR + K+G + P+ + + E L+ +T SDVWS
Sbjct: 178 KVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALESLQTQKFTTK-SDVWSF 228
Query: 257 GVVLY-AMAFGRLPFDDTN 274
GV+L+ M G P+ D N
Sbjct: 229 GVLLWELMTRGAPPYPDVN 247
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+VIG G + V L + AVK ++++ + + +FL I ++K HPN+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNV 111
Query: 127 IRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYCHE 182
+ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLAS 169
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARG-------HMKCKSGHQSPLSDTFCGSYAY 235
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+ +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK--------W 221
Query: 236 ASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 222 MALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 260
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 33/260 (12%)
Query: 31 SSSNKLDLDASSRS-TLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATV---KLATST 86
S N + +D S+ + L+ A + V S+++ + +VIG G + V L +
Sbjct: 1 GSLNTVHIDLSALNPELVQAVQHVVIGPSSLIVH----FNEVIGRGHFGCVYHGTLLDND 56
Query: 87 RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ-AIETTHRVYIIMEY 145
AVK ++++ + + +FL I ++K HPN++ L + + +++ Y
Sbjct: 57 GKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPLVVLPY 114
Query: 146 AEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYCHERGVVHRDIKCENLLIDGEYN 202
+ G L +FI+ E + P K Q+ + + + VHRD+ N ++D ++
Sbjct: 115 MKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT 172
Query: 203 IKLSDFGFARGHM-------KCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWS 255
+K++DFG AR + K+G + P+ + + E L+ +T SDVWS
Sbjct: 173 VKVADFGLARDMLDKEFDSVHNKTGAKLPVK--------WMALESLQTQKFTTK-SDVWS 223
Query: 256 MGVVLY-AMAFGRLPFDDTN 274
GV+L+ M G P+ D N
Sbjct: 224 FGVLLWELMTRGAPPYPDVN 243
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 33/257 (12%)
Query: 34 NKLDLDASSRS-TLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATV---KLATSTRHG 89
N + +D S+ + L+ A + V S+++ + +VIG G + V L +
Sbjct: 2 NTVHIDLSALNPELVQAVQHVVIGPSSLIVH----FNEVIGRGHFGCVYHGTLLDNDGKK 57
Query: 90 CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ-AIETTHRVYIIMEYAEK 148
AVK ++++ + + +FL I ++K HPN++ L + + +++ Y +
Sbjct: 58 IHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH 115
Query: 149 GSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKL 205
G L +FI+ E + P K Q+ + Y + VHRD+ N ++D ++ +K+
Sbjct: 116 GDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKV 173
Query: 206 SDFGFARG-------HMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGV 258
+DFG AR + K+G + P+ + + E L+ +T SDVWS GV
Sbjct: 174 ADFGLARDMYDKEYYSVHNKTGAKLPVK--------WMALESLQTQKFTTK-SDVWSFGV 224
Query: 259 VLY-AMAFGRLPFDDTN 274
+L+ M G P+ D N
Sbjct: 225 LLWELMTRGAPPYPDVN 241
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 110
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL 168
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGH-------MKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------- 221
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 222 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 261
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 91
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL 149
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-------HMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------- 202
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 203 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 37/244 (15%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVK--VVSKVEAPPDYLKKF--LPREIDVVKGLRHPN 125
K IG G + V + VA+K ++ E + ++KF RE+ ++ L HPN
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 126 LIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKW---FRQLVD---AIDY 179
+++ + R ++ME+ G L + +D+ KW R ++D I+Y
Sbjct: 85 IVKLYGLMHNPPR--MVMEFVPCGDLYHRL-----LDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 180 CHERG--VVHRDIKCENLLI-----DGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGS 232
+ +VHRD++ N+ + + K++DF ++ + SG G+
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG--------LLGN 189
Query: 233 YAYASPEILKGV--PYTPHYSDVWSMGVVLYAMAFGRLPFDDTNY--IQLLKQVQTKVVF 288
+ + +PE + YT +D +S ++LY + G PFD+ +Y I+ + ++ + +
Sbjct: 190 FQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 289 PTEP 292
PT P
Sbjct: 249 PTIP 252
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 83
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL 141
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-------HMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------- 194
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 195 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 234
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVD----- 175
RHP+L+ + + + + +I +Y E G+L +R Y D P + Q ++
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNL----KRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 176 --AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
+ Y H R ++HRD+K N+L+D + K++DFG ++ K Q+ L G+
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK---KGTELDQTHLXXVVKGTL 205
Query: 234 AYASPE-ILKGVPYTPHYSDVWSMGVVLYAMAFGR 267
Y PE +KG SDV+S GVVL+ + R
Sbjct: 206 GYIDPEYFIKG--RLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 88
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL 146
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-------HMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------- 199
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 200 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 239
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREGY-IDEPRTKKWFRQLVD----- 175
RHP+L+ + + + + +I +Y E G+L +R Y D P + Q ++
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNL----KRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 176 --AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSY 233
+ Y H R ++HRD+K N+L+D + K++DFG ++ K Q+ L G+
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK---KGTELGQTHLXXVVKGTL 205
Query: 234 AYASPE-ILKGVPYTPHYSDVWSMGVVLYAMAFGR 267
Y PE +KG SDV+S GVVL+ + R
Sbjct: 206 GYIDPEYFIKG--RLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 89
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL 147
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-------HMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------- 200
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 201 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 86
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + Y
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYL 144
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFARG-------HMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK------- 197
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 198 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 237
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--LPREIDVVKGLRHPNLI 127
KV+G G + TV G + + V KV + F + + + L H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + + ++ +Y GSLLD + Q G + W Q+ + Y E G+V
Sbjct: 97 RLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 155
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFA-----RGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
HR++ N+L+ ++++DFG A S ++P+ S +
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK---- 211
Query: 242 KGVPYTPHYSDVWSMGVVLYA-MAFGRLPF 270
YT H SDVWS GV ++ M FG P+
Sbjct: 212 ----YT-HQSDVWSYGVTVWELMTFGAEPY 236
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 65 GYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
Y + +IG GSY V LA +VA+K V+++ K+ L REI ++ L+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL-REITILNRLKSD 87
Query: 125 NLIRFLQAI-----ETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
+IR I +YI++E A+ L + ++ E K L+ +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 180 CHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR 212
HE G++HRD+K N L++ + ++K+ DFG AR
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 33/260 (12%)
Query: 31 SSSNKLDLDASSRS-TLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATV---KLATST 86
S N + +D S+ + L+ A + V S+++ + +VIG G + V L +
Sbjct: 1 GSLNTVHIDLSALNPELVQAVQHVVIGPSSLIVH----FNEVIGRGHFGCVYHGTLLDND 56
Query: 87 RHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ-AIETTHRVYIIMEY 145
AVK ++++ + + +FL I ++K HPN++ L + + +++ Y
Sbjct: 57 GKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPLVVLPY 114
Query: 146 AEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYCHERGVVHRDIKCENLLIDGEYN 202
+ G L +FI+ E + P K Q+ + + + VHRD+ N ++D ++
Sbjct: 115 MKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT 172
Query: 203 IKLSDFGFAR-------GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWS 255
+K++DFG AR + K+G + P+ + + E L+ +T SDVWS
Sbjct: 173 VKVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALESLQTQKFTTK-SDVWS 223
Query: 256 MGVVLY-AMAFGRLPFDDTN 274
GV+L+ M G P+ D N
Sbjct: 224 FGVLLWELMTRGAPPYPDVN 243
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 33/259 (12%)
Query: 32 SSNKLDLDASSRS-TLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATV---KLATSTR 87
+N + +D S+ + L+ A + V S+++ + +VIG G + V L +
Sbjct: 1 GANTVHIDLSALNPELVQAVQHVVIGPSSLIVH----FNEVIGRGHFGCVYHGTLLDNDG 56
Query: 88 HGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQ-AIETTHRVYIIMEYA 146
AVK ++++ + + +FL I ++K HPN++ L + + +++ Y
Sbjct: 57 KKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 147 EKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYCHERGVVHRDIKCENLLIDGEYNI 203
+ G L +FI+ E + P K Q+ + + + VHRD+ N ++D ++ +
Sbjct: 115 KHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTV 172
Query: 204 KLSDFGFAR-------GHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSM 256
K++DFG AR + K+G + P+ + + E L+ +T SDVWS
Sbjct: 173 KVADFGLARDMYDKEFDSVHNKTGAKLPVK--------WMALESLQTQKFTTK-SDVWSF 223
Query: 257 GVVLY-AMAFGRLPFDDTN 274
GV+L+ M G P+ D N
Sbjct: 224 GVLLWELMTRGAPPYPDVN 242
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 125/288 (43%), Gaps = 57/288 (19%)
Query: 56 KKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREI 115
KK+ +++++ V +V+G+G V + R A+K++ + P RE+
Sbjct: 11 KKNAIIDDYK-VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--DCPKAR------REV 61
Query: 116 DV-VKGLRHPNLIRFLQAIETTHR----VYIIMEYAEKGSLLDFIQREG--YIDEPRTKK 168
++ + + P+++R + E + + I+ME + G L IQ G E +
Sbjct: 62 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 121
Query: 169 WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYN---IKLSDFGFARGHMKCKSGHQSPL 225
+ + +AI Y H + HRD+K ENLL + +KL+DFGFA K +G +
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----KETTGEK--- 174
Query: 226 SDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFDDTNYIQLLKQVQTK 285
D C D+WS+GV++Y + G PF + + + ++T+
Sbjct: 175 YDKSC---------------------DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR 213
Query: 286 VVF-------PTEPNVSAECKTLLSKIF--SPIKFRIRLKDIKQDPWV 324
+ P VS E K L+ + P + R+ + + PW+
Sbjct: 214 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEFMNHPWI 260
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVV-KGLRHPNLIRFL 130
IG G+Y +V G +AVK + + +K L ++DVV + P +++F
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE--QKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 131 QAIETTHRVYIIME---------YAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDYCH 181
A+ +I ME Y S+LD + I E K V A+++
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDV-----IPEEILGKITLATVKALNHLK 142
Query: 182 ER-GVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEI 240
E ++HRDIK N+L+D NIKL DFG + + + + G Y +PE
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD------AGCRPYMAPER 196
Query: 241 LKGVPYTPHY---SDVWSMGVVLYAMAFGRLPFDDTNYI 276
+ Y SDVWS+G+ LY +A GR P+ N +
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV 235
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 14 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 71
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 72 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 132 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL---- 187
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 188 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 238
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 80
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 81 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 141 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL---- 196
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 197 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKF--LPREIDVVKGLRHPNLI 127
KV+G G + TV G + + V KV + F + + + L H +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 128 RFLQAIETTHRVYIIMEYAEKGSLLDFI-QREGYIDEPRTKKWFRQLVDAIDYCHERGVV 186
R L + + ++ +Y GSLLD + Q G + W Q+ + Y E G+V
Sbjct: 79 RLL-GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137
Query: 187 HRDIKCENLLIDGEYNIKLSDFGFA-----RGHMKCKSGHQSPLSDTFCGSYAYASPEIL 241
HR++ N+L+ ++++DFG A S ++P+ S +
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK---- 193
Query: 242 KGVPYTPHYSDVWSMGVVLYA-MAFGRLPF 270
YT H SDVWS GV ++ M FG P+
Sbjct: 194 ----YT-HQSDVWSYGVTVWELMTFGAEPY 218
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 89
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + +
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFL 147
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-------GHMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK------- 200
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 201 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 112/250 (44%), Gaps = 46/250 (18%)
Query: 68 LGKVIGIGSYATVKLATS---TRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL-RH 123
GKV+G G++ V AT+ ++ G + V V E ++ L E+ ++ L H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 124 PNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI--QREGY----IDEPRTKK--------- 168
N++ L A + +Y+I EY G LL+++ +RE + I+ K+
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 169 --------WFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMK---- 216
+ Q+ +++ + VHRD+ N+L+ +K+ DFG AR M
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 217 -CKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD--- 271
+ + P+ + +PE L YT SDVWS G++L+ + + G P+
Sbjct: 229 VVRGNARLPVK--------WMAPESLFEGIYTIK-SDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 272 -DTNYIQLLK 280
D N+ +L++
Sbjct: 280 VDANFYKLIQ 289
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 39/231 (16%)
Query: 68 LGKVIGIGSYATVKLATSTRHGCD-----VAVKVVSKVEAPPDYLKKFLPREIDVVKGL- 121
GK +G G++ V AT+ G + VAVK++ + K+ L E+ ++ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLG 107
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGYIDEPR 165
+H N++ L A V +I EY G LL+F++R E +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 166 TKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMK-----CKSG 220
+ Q+ + + + +HRD+ N+L+ + K+ DFG AR M K
Sbjct: 168 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 221 HQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
+ P+ + +PE + YT SDVWS G++L+ + + G P+
Sbjct: 228 ARLPVK--------WMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPY 269
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 68 LGKVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHP 124
+VIG G + V L + AVK ++++ + + +FL I ++K HP
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE-VSQFLTEGI-IMKDFSHP 91
Query: 125 NLIRFLQ-AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF---RQLVDAIDYC 180
N++ L + + +++ Y + G L +FI+ E + P K Q+ + +
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFL 149
Query: 181 HERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-------GHMKCKSGHQSPLSDTFCGSY 233
+ VHRD+ N ++D ++ +K++DFG AR + K+G + P+
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK------- 202
Query: 234 AYASPEILKGVPYTPHYSDVWSMGVVLY-AMAFGRLPFDDTN 274
+ + E L+ +T SDVWS GV+L+ M G P+ D N
Sbjct: 203 -WMALESLQTQKFTTK-SDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 19 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 76
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ--REGYIDEP--------RTKKWFRQ 172
+++R L + +IME +G L +++ R + P + + +
Sbjct: 77 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 137 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 192
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 193 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 243
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 86
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQ--REGYIDEP--------RTKKWFRQ 172
+++R L + +IME +G L +++ R + P + + +
Sbjct: 87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 147 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 202
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 203 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 20 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 77
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 78 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 137
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 138 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 193
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 194 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 244
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 79
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 80 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 140 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 195
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 196 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 73
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 74 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 134 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 189
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 190 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 79
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 80 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 140 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 195
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 196 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 246
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 86
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 147 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 202
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 203 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 253
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 80
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 81 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 141 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 196
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 197 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 247
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 35/243 (14%)
Query: 68 LGKVIGIGSYATVKLATSTRHGC---DVAVKVVSKVEAPPDYL--KKFLPREIDVVKGL- 121
GK +G G++ K+ +T +G D A+ V K+ P +L ++ L E+ V+ L
Sbjct: 50 FGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI--QREGYIDEPRT------------- 166
H N++ L A +I EY G LL+F+ +R+ +I +
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 167 ---KKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQS 223
+ Q+ + + + +HRD+ N+L+ K+ DFG AR H+K S +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR-HIKNDSNYVV 226
Query: 224 PLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD----DTNYIQL 278
+ + +PE + YT SDVWS G+ L+ + + G P+ D+ + ++
Sbjct: 227 KGNARL--PVKWMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 279 LKQ 281
+K+
Sbjct: 284 IKE 286
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 108/267 (40%), Gaps = 62/267 (23%)
Query: 46 LIAANKRDVKK--KSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAP 103
++A K+D++K ++ ++ + + IG G++++V LAT+ +++
Sbjct: 1 MLAGVKKDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATA-------------QLQVG 47
Query: 104 PD---YLKKFLPRE--IDVVKGLR-------HPNLIRFLQAIETTHRVYIIMEYAEKGSL 151
P+ LK +P I + L+ N++ V I M Y E S
Sbjct: 48 PEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESF 107
Query: 152 LDFIQREGYIDEPRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLS----- 206
LD + + + +++ L A+ H+ G+VHRD+K N L YN +L
Sbjct: 108 LDILNSLSFQE---VREYMLNLFKALKRIHQFGIVHRDVKPSNFL----YNRRLKKYALV 160
Query: 207 DFGFARGHMKCK---------SGHQSPLSDTFC--------------GSYAYASPEILKG 243
DFG A+G K Q S C G+ + +PE+L
Sbjct: 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK 220
Query: 244 VPYTPHYSDVWSMGVVLYAMAFGRLPF 270
P D+WS GV+ ++ GR PF
Sbjct: 221 CPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 26/246 (10%)
Query: 92 VAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGS 150
VA+K + K E P L++ E + L+HPN++ L + + +I Y G
Sbjct: 59 VAIKTLKDKAEGP---LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 115
Query: 151 LLDFIQRE------GYIDEPRTKK----------WFRQLVDAIDYCHERGVVHRDIKCEN 194
L +F+ G D+ RT K Q+ ++Y VVH+D+ N
Sbjct: 116 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN 175
Query: 195 LLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVW 254
+L+ + N+K+SD G R + + L + +PE + ++ SD+W
Sbjct: 176 VLVYDKLNVKISDLGLFR---EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID-SDIW 231
Query: 255 SMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPI-KFR 312
S GVVL+ ++G P+ + +++ ++ + V P + A L+ + ++ R
Sbjct: 232 SYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRR 291
Query: 313 IRLKDI 318
R KDI
Sbjct: 292 PRFKDI 297
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 26/246 (10%)
Query: 92 VAVKVV-SKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGS 150
VA+K + K E P L++ E + L+HPN++ L + + +I Y G
Sbjct: 42 VAIKTLKDKAEGP---LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGD 98
Query: 151 LLDFIQRE------GYIDEPRTKK----------WFRQLVDAIDYCHERGVVHRDIKCEN 194
L +F+ G D+ RT K Q+ ++Y VVH+D+ N
Sbjct: 99 LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN 158
Query: 195 LLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVW 254
+L+ + N+K+SD G R + + L + +PE + ++ SD+W
Sbjct: 159 VLVYDKLNVKISDLGLFR---EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID-SDIW 214
Query: 255 SMGVVLY-AMAFGRLPFDDTNYIQLLKQVQTKVVFPTEPNVSAECKTLLSKIFSPI-KFR 312
S GVVL+ ++G P+ + +++ ++ + V P + A L+ + ++ R
Sbjct: 215 SYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRR 274
Query: 313 IRLKDI 318
R KDI
Sbjct: 275 PRFKDI 280
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 46/238 (19%)
Query: 68 LGKVIGIGSYATVKLATSTRHG-----CDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL- 121
GK +G G++ V AT+ G VAVK++ + K+ L E+ ++ L
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLG 92
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQR----------------EGYIDEPR 165
+H N++ L A V +I EY G LL+F++R EG E
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 166 TKKWFR-------QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMK-- 216
R Q+ + + + +HRD+ N+L+ + K+ DFG AR M
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 217 ---CKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPF 270
K + P+ + +PE + YT SDVWS G++L+ + + G P+
Sbjct: 213 NYIVKGNARLPVK--------WMAPESIFDCVYTVQ-SDVWSYGILLWEIFSLGLNPY 261
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 51 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 108
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 109 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N ++ ++ +K+ DFG R + + G + L
Sbjct: 169 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 224
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 225 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 275
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF--RQLVDAIDYCHERGVVHRD 189
A ET + +++ G L I G P + F ++ ++ H +V+RD
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF---CGSYAYASPEILKGVPY 246
+K EN+L+D +I++SD G A P T G+ Y +PE++K Y
Sbjct: 312 LKPENILLDDHGHIRISDLGLAV---------HVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDD-------TNYIQLLKQVQTKVVFPTEPNVSAECK 299
T D W++G +LY M G+ PF +L+K+V + P + C
Sbjct: 363 T-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 300 TLLSK 304
LL K
Sbjct: 422 QLLCK 426
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 28/234 (11%)
Query: 68 LGKVIGIGSYATV-----KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLR 122
+ + +G GS+ V K VA+K V++ + + ++ FL E V+K
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FL-NEASVMKEFN 73
Query: 123 HPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI-------QREGYIDEPRTKKWFR---Q 172
+++R L + +IME +G L ++ + + P K + +
Sbjct: 74 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 173 LVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKC---KSGHQSPLSDTF 229
+ D + Y + VHRD+ N + ++ +K+ DFG R + + G + L
Sbjct: 134 IADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL---- 189
Query: 230 CGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQV 282
+ SPE LK +T YSDVWS GVVL+ +A P+ + Q+L+ V
Sbjct: 190 --PVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV 240
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 45/248 (18%)
Query: 68 LGKVIGIGSYATVKLATSTRHGC---DVAVKVVSKVEAPPDYL--KKFLPREIDVVKGL- 121
GK +G G++ K+ +T +G D A+ V K+ P +L ++ L E+ V+ L
Sbjct: 43 FGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 100
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI--QREGYIDEPRT------------- 166
H N++ L A +I EY G LL+F+ +R+ +I +
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 167 ---KKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ Q+ + + + +HRD+ N+L+ K+ DFG AR + K
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD----DT 273
+ P+ + +PE + YT SDVWS G+ L+ + + G P+ D+
Sbjct: 221 GNARLPVK--------WMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
Query: 274 NYIQLLKQ 281
+ +++K+
Sbjct: 272 KFYKMIKE 279
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 45/248 (18%)
Query: 68 LGKVIGIGSYATVKLATSTRHGC---DVAVKVVSKVEAPPDYL--KKFLPREIDVVKGL- 121
GK +G G++ K+ +T +G D A+ V K+ P +L ++ L E+ V+ L
Sbjct: 27 FGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI--QREGYIDEPRT------------- 166
H N++ L A +I EY G LL+F+ +R+ +I +
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 167 ---KKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ Q+ + + + +HRD+ N+L+ K+ DFG AR + K
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD----DT 273
+ P+ + +PE + YT SDVWS G+ L+ + + G P+ D+
Sbjct: 205 GNARLPVK--------WMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 274 NYIQLLKQ 281
+ +++K+
Sbjct: 256 KFYKMIKE 263
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 132 AIETTHRVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWF--RQLVDAIDYCHERGVVHRD 189
A ET + +++ G L I G P + F ++ ++ H +V+RD
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 190 IKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF---CGSYAYASPEILKGVPY 246
+K EN+L+D +I++SD G A P T G+ Y +PE++K Y
Sbjct: 312 LKPENILLDDHGHIRISDLGLAV---------HVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 247 TPHYSDVWSMGVVLYAMAFGRLPFDD-------TNYIQLLKQVQTKVVFPTEPNVSAECK 299
T D W++G +LY M G+ PF +L+K+V + P + C
Sbjct: 363 T-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 300 TLLSK 304
LL K
Sbjct: 422 QLLCK 426
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 20/168 (11%)
Query: 114 EIDVVKGLRHPNLIRFLQAIETTHRV----YIIMEYAEKGSLLDFIQRE-------GYID 162
E+ + G++H N+++F+ A + V ++I + EKGSL DF++ +I
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIA 127
Query: 163 E--PRTKKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSG 220
E R + + + + H+ + HRDIK +N+L+ ++DFG A +K ++G
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA---LKFEAG 184
Query: 221 HQSPLSDTFCGSYAYASPEILKGVPYTPHYS----DVWSMGVVLYAMA 264
+ + G+ Y +PE+L+G + D+++MG+VL+ +A
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 45/248 (18%)
Query: 68 LGKVIGIGSYATVKLATSTRHGC---DVAVKVVSKVEAPPDYL--KKFLPREIDVVKGL- 121
GK +G G++ K+ +T +G D A+ V K+ P +L ++ L E+ V+ L
Sbjct: 50 FGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 107
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI--QREGYIDEPRT------------- 166
H N++ L A +I EY G LL+F+ +R+ +I +
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 167 ---KKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ Q+ + + + +HRD+ N+L+ K+ DFG AR + K
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD----DT 273
+ P+ + +PE + YT SDVWS G+ L+ + + G P+ D+
Sbjct: 228 GNARLPVK--------WMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 274 NYIQLLKQ 281
+ +++K+
Sbjct: 279 KFYKMIKE 286
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 30/226 (13%)
Query: 70 KVIGIGSYATV---KLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
+VIG G + V + ++ A+K +S++ ++ FL RE +++GL HPN+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFL-REGLLMRGLNHPNV 84
Query: 127 IRFLQAIETTHRV-YIIMEYAEKGSLLDFI---QREGYIDEPRTKKWFRQLVDAIDYCHE 182
+ + + + ++++ Y G LL FI QR + + + Q+ ++Y E
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKD--LISFGLQVARGMEYLAE 142
Query: 183 RGVVHRDIKCENLLIDGEYNIKLSDFGFARG-----HMKCKSGHQSPLSDTFCGSYAYAS 237
+ VHRD+ N ++D + +K++DFG AR + + + L + +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL------PVKWTA 196
Query: 238 PEILKGVPYTPHYSDVWSMGVVLYAM------AFGRL-PFDDTNYI 276
E L+ +T SDVWS GV+L+ + + + PFD T+++
Sbjct: 197 LESLQTYRFTTK-SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL 241
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 45/248 (18%)
Query: 68 LGKVIGIGSYATVKLATSTRHGC---DVAVKVVSKVEAPPDYL--KKFLPREIDVVKGL- 121
GK +G G++ K+ +T +G D A+ V K+ P +L ++ L E+ V+ L
Sbjct: 45 FGKTLGAGAFG--KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 102
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFI--QREGYIDEPRT------------- 166
H N++ L A +I EY G LL+F+ +R+ +I +
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 167 ---KKWFRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFAR-----GHMKCK 218
+ Q+ + + + +HRD+ N+L+ K+ DFG AR + K
Sbjct: 163 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 219 SGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAM-AFGRLPFD----DT 273
+ P+ + +PE + YT SDVWS G+ L+ + + G P+ D+
Sbjct: 223 GNARLPVK--------WMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDS 273
Query: 274 NYIQLLKQ 281
+ +++K+
Sbjct: 274 KFYKMIKE 281
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDV-VKGLRHPNLIRFL 130
+G G+Y V+ G +AVK + + +K L ++D+ ++ + P + F
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFY 72
Query: 131 QAIETTHRVYIIMEYAEKGSLLDF----IQREGYIDEPRTKKWFRQLVDAIDYCHER-GV 185
A+ V+I ME + SL F I + I E K +V A+++ H + V
Sbjct: 73 GALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K N+LI+ +K+ DFG + G++ D G Y +PE +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGIS-GYLV-----DDVAKDIDAGCKPYMAPERINPEL 185
Query: 246 YTPHY---SDVWSMGVVLYAMAFGRLPFDDTNY-IQLLKQV 282
Y SD+WS+G+ + +A R P+D Q LKQV
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 72 IGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDV-VKGLRHPNLIRFL 130
+G G+Y V+ G +AVK + + +K L ++D+ ++ + P + F
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQE--QKRLLMDLDISMRTVDCPFTVTFY 116
Query: 131 QAIETTHRVYIIMEYAEKGSLLDF----IQREGYIDEPRTKKWFRQLVDAIDYCHER-GV 185
A+ V+I ME + SL F I + I E K +V A+++ H + V
Sbjct: 117 GALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 186 VHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCGSYAYASPEILKGVP 245
+HRD+K N+LI+ +K+ DFG + G++ S G Y +PE +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGIS-GYLV-----DSVAKTIDAGCKPYMAPERINPEL 229
Query: 246 YTPHY---SDVWSMGVVLYAMAFGRLPFDDTNY-IQLLKQV 282
Y SD+WS+G+ + +A R P+D Q LKQV
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 270
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 26/252 (10%)
Query: 49 ANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEA------ 102
A RD+ + M++ Y + + I GSY V + G VA+K V +
Sbjct: 8 AAMRDLIAELHAMQS-PYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVN 65
Query: 103 --PPDYLKKFLPREIDVVKGLRHPNLIR----FLQAIE-TTHRVYIIMEYAEKGSLLDFI 155
+L K + REI ++ HPN++ F+ E H++Y++ E + L I
Sbjct: 66 ILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVI 124
Query: 156 QREGYIDEPRTKKWFR-QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGH 214
+ + P+ ++F ++ + HE GVVHRD+ N+L+ +I + DF AR
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED 184
Query: 215 MKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGR--LPFDD 272
+ + Y +PE++ D+WS G V+ M F R L
Sbjct: 185 TADANKTH------YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM-FNRKALFRGS 237
Query: 273 TNYIQLLKQVQT 284
T Y QL K V+
Sbjct: 238 TFYNQLNKIVEV 249
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 44/221 (19%)
Query: 75 GSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLK-KFLP----------REIDVVKGLRH 123
GS +++ R GC V K + D++ K P REI G++H
Sbjct: 15 GSLQLLEIKARGRFGC------VWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKH 68
Query: 124 PNLIRFLQAIETTH----RVYIIMEYAEKGSLLDFIQRE-------GYIDEPRTKKWFRQ 172
NL++F+ A + +++I + +KGSL D+++ ++ E ++
Sbjct: 69 ENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRG-LSY 127
Query: 173 LVDAIDYC----HERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT 228
L + + +C H+ + HRD K +N+L+ + L+DFG A ++ + G P DT
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA---VRFEPG--KPPGDT 182
Query: 229 F--CGSYAYASPEILKGVPYTPHYS----DVWSMGVVLYAM 263
G+ Y +PE+L+G + D+++MG+VL+ +
Sbjct: 183 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 26/252 (10%)
Query: 49 ANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEA------ 102
A RD+ + M++ Y + + I GSY V + G VA+K V +
Sbjct: 8 AAMRDLIAELHAMQS-PYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVN 65
Query: 103 --PPDYLKKFLPREIDVVKGLRHPNLIR----FLQAIE-TTHRVYIIMEYAEKGSLLDFI 155
+L K + REI ++ HPN++ F+ E H++Y++ E + L I
Sbjct: 66 ILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVI 124
Query: 156 QREGYIDEPRTKKWFR-QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGH 214
+ + P+ ++F ++ + HE GVVHRD+ N+L+ +I + DF AR
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARED 184
Query: 215 MKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGR--LPFDD 272
+ + Y +PE++ D+WS G V+ M F R L
Sbjct: 185 TADAN------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM-FNRKALFRGS 237
Query: 273 TNYIQLLKQVQT 284
T Y QL K V+
Sbjct: 238 TFYNQLNKIVEV 249
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 27/219 (12%)
Query: 64 HGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRH 123
H L + +G G Y V + G +VAVK+ S D F E+ LRH
Sbjct: 8 HQITLLECVGKGRYGEV--WRGSWQGENVAVKIFSS----RDEKSWFRETELYNTVMLRH 61
Query: 124 PNLIRFLQAIETTH----RVYIIMEYAEKGSLLDFIQREGYIDEPRTKKWFRQLVDAIDY 179
N++ F+ + T+ ++++I Y E GSL D++Q +D + + + +
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-LDTVSCLRIVLSIASGLAH 120
Query: 180 CH--------ERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT-FC 230
H + + HRD+K +N+L+ ++D G A H +S +Q + +
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH--SQSTNQLDVGNNPRV 178
Query: 231 GSYAYASPEILKGVPYTPHYS-----DVWSMGVVLYAMA 264
G+ Y +PE+L + D+W+ G+VL+ +A
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 139 VYIIMEYAEKGSLLDFIQREGYIDEPR---TKKWFRQLVDAIDYCHERGVVHRDIKCENL 195
+YI M+ K +L D++ R +++ F Q+ +A+++ H +G++HRD+K N+
Sbjct: 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI 195
Query: 196 LIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDT--------FCGSYAYASPEILKGVPYT 247
+ +K+ DFG M Q+ L+ G+ Y SPE + G Y+
Sbjct: 196 FFTMDDVVKVGDFGLVTA-MDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYS 254
Query: 248 PHYSDVWSMGVVLYAMAFG 266
H D++S+G++L+ + +
Sbjct: 255 -HKVDIFSLGLILFELLYS 272
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 54/280 (19%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
VL + IG G + V G +VAVK+ S E F EI LRH N+
Sbjct: 32 VLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERS----WFREAEIYQTVMLRHENI 85
Query: 127 IRFLQAIE----TTHRVYIIMEYAEKGSLLDFIQR-----EGYIDEP-RTKKWFRQL-VD 175
+ F+ A T +++++ +Y E GSL D++ R EG I T L ++
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF------ 229
+ + + HRD+K +N+L+ ++D G A H +DT
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH--------DSATDTIDIAPNH 197
Query: 230 -CGSYAYASPEILKGVPYTPHY-----SDVWSMGVVLYAMA----FG------RLPF--- 270
G+ Y +PE+L H+ +D+++MG+V + +A G +LP+
Sbjct: 198 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 257
Query: 271 --DDTNYIQLLKQVQTKVVFPTEPNVSAECKTL--LSKIF 306
D + ++ K V + + P PN C+ L ++KI
Sbjct: 258 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 297
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 35/243 (14%)
Query: 40 ASSRSTLIAANKRDVKKKSTVMENHGYVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK 99
+ S S L +R V ++ T++E +G G Y V + G +VAVK+ S
Sbjct: 21 SGSGSGLPFLVQRTVARQITLLE--------CVGKGRYGEV--WRGSWQGENVAVKIFSS 70
Query: 100 VEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTH----RVYIIMEYAEKGSLLDFI 155
D F E+ LRH N++ F+ + T+ ++++I Y E GSL D++
Sbjct: 71 ----RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL 126
Query: 156 QREGYIDEPRTKKWFRQLVDAIDYCH--------ERGVVHRDIKCENLLIDGEYNIKLSD 207
Q +D + + + + H + + HRD+K +N+L+ ++D
Sbjct: 127 QLTT-LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 185
Query: 208 FGFARGHMKCKSGHQSPLSDT-FCGSYAYASPEILKGVPYTPHYS-----DVWSMGVVLY 261
G A H +S +Q + + G+ Y +PE+L + D+W+ G+VL+
Sbjct: 186 LGLAVMH--SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 243
Query: 262 AMA 264
+A
Sbjct: 244 EVA 246
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 54/280 (19%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
VL + IG G + V G +VAVK+ S E F EI LRH N+
Sbjct: 12 VLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERS----WFREAEIYQTVMLRHENI 65
Query: 127 IRFLQAIE----TTHRVYIIMEYAEKGSLLDFIQR-----EGYIDEP-RTKKWFRQL-VD 175
+ F+ A T +++++ +Y E GSL D++ R EG I T L ++
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF------ 229
+ + + HRD+K +N+L+ ++D G A H +DT
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH--------DSATDTIDIAPNH 177
Query: 230 -CGSYAYASPEILKGVPYTPHY-----SDVWSMGVVLYAMA----FG------RLPF--- 270
G+ Y +PE+L H+ +D+++MG+V + +A G +LP+
Sbjct: 178 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 237
Query: 271 --DDTNYIQLLKQVQTKVVFPTEPNVSAECKTL--LSKIF 306
D + ++ K V + + P PN C+ L ++KI
Sbjct: 238 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 277
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 39/257 (15%)
Query: 70 KVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIR- 128
++IG G + V A +H D V+ +V+ Y + RE+ + L H N++
Sbjct: 17 ELIGSGGFGQVFKA---KHRIDGKTYVIKRVK----YNNEKAEREVKALAKLDHVNIVHY 69
Query: 129 ------FLQAIETTHR---------VYIIMEYAEKGSLLDFIQ--REGYIDEPRTKKWFR 171
F ET+ + ++I ME+ +KG+L +I+ R +D+ + F
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 172 QLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTFCG 231
Q+ +DY H + +++RD+K N+ + +K+ DFG +S G
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK------G 183
Query: 232 SYAYASPEILKGVPYTPHYSDVWSMGVVLYAMA-FGRLPFDDTNYIQLLKQVQTKVVFPT 290
+ Y SPE + Y D++++G++L + F+ + + L+ +F
Sbjct: 184 TLRYMSPEQISSQDYGKEV-DLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDK 242
Query: 291 EPNVSAECKTLLSKIFS 307
+ KTLL K+ S
Sbjct: 243 KE------KTLLQKLLS 253
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 54/280 (19%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
VL + IG G + V G +VAVK+ S E F EI LRH N+
Sbjct: 45 VLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREER----SWFREAEIYQTVMLRHENI 98
Query: 127 IRFLQAIE----TTHRVYIIMEYAEKGSLLDFIQR-----EGYIDEP-RTKKWFRQL-VD 175
+ F+ A T +++++ +Y E GSL D++ R EG I T L ++
Sbjct: 99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF------ 229
+ + + HRD+K +N+L+ ++D G A H +DT
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH--------DSATDTIDIAPNH 210
Query: 230 -CGSYAYASPEILKGVPYTPHY-----SDVWSMGVVLYAMA----FG------RLPF--- 270
G+ Y +PE+L H+ +D+++MG+V + +A G +LP+
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270
Query: 271 --DDTNYIQLLKQVQTKVVFPTEPNVSAECKTL--LSKIF 306
D + ++ K V + + P PN C+ L ++KI
Sbjct: 271 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 310
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 103/250 (41%), Gaps = 52/250 (20%)
Query: 67 VLGKVIGIGSYATVKLA-----TSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGL 121
VL + +G G++ V LA + T+ VAVK + P +K RE +++ L
Sbjct: 18 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD---PTLAARKDFQREAELLTNL 74
Query: 122 RHPNLIRFLQAIETTHRVYIIMEYAEKGSLLDFIQREG-----YID-EPRTKKW------ 169
+H ++++F + ++ EY + G L F++ G +D +PR K
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 170 ----FRQLVDAIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPL 225
Q+ + Y + VHRD+ N L+ +K+ DFG +R
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR------------- 181
Query: 226 SDTFCGSYAYASPEILKGVPYTP----------HYSDVWSMGVVLYAM-AFGRLPF---D 271
D + Y + + + P SDVWS GV+L+ + +G+ P+
Sbjct: 182 -DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
Query: 272 DTNYIQLLKQ 281
+T I+ + Q
Sbjct: 241 NTEVIECITQ 250
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 52/237 (21%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK----VEAPPDYLKKFLPREID----- 116
Y+L + +G G ++TV LA + VA+K+V EA D + K L R D
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEI-KLLQRVNDADNTK 79
Query: 117 --------VVKGLRH-----PNLIRFLQAIETT--HRVYIIMEYAEKGSLLDFIQREGYI 161
++K L H PN + + E + + +I +Y +G L ++
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV------ 133
Query: 162 DEPRTKKWFRQLVDAIDYCHER-GVVHRDIKCENLL---IDGEYN---IKLSDFGFARGH 214
K+ +QL+ +DY H R G++H DIK EN+L +D N IK++D G A
Sbjct: 134 -----KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--- 185
Query: 215 MKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFD 271
C S + Y SPE+L G P+ +D+WS +++ + G F+
Sbjct: 186 --CWYDEHYTNS---IQTREYRSPEVLLGAPWGCG-ADIWSTACLIFELITGDFLFE 236
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 54/280 (19%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
VL + IG G + V G +VAVK+ S E F EI LRH N+
Sbjct: 6 VLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERS----WFREAEIYQTVMLRHENI 59
Query: 127 IRFLQAIE----TTHRVYIIMEYAEKGSLLDFIQR-----EGYIDEP-RTKKWFRQL-VD 175
+ F+ A T +++++ +Y E GSL D++ R EG I T L ++
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF------ 229
+ + + HRD+K +N+L+ ++D G A H +DT
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH--------DSATDTIDIAPNH 171
Query: 230 -CGSYAYASPEILKGVPYTPHY-----SDVWSMGVVLYAMA----FG------RLPF--- 270
G+ Y +PE+L H+ +D+++MG+V + +A G +LP+
Sbjct: 172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231
Query: 271 --DDTNYIQLLKQVQTKVVFPTEPNVSAECKTL--LSKIF 306
D + ++ K V + + P PN C+ L ++KI
Sbjct: 232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 271
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 54/280 (19%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
VL + IG G + V G +VAVK+ S E F EI LRH N+
Sbjct: 9 VLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERS----WFREAEIYQTVMLRHENI 62
Query: 127 IRFLQAIE----TTHRVYIIMEYAEKGSLLDFIQR-----EGYIDEP-RTKKWFRQL-VD 175
+ F+ A T +++++ +Y E GSL D++ R EG I T L ++
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF------ 229
+ + + HRD+K +N+L+ ++D G A H +DT
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH--------DSATDTIDIAPNH 174
Query: 230 -CGSYAYASPEILKGVPYTPHY-----SDVWSMGVVLYAMA----FG------RLPF--- 270
G+ Y +PE+L H+ +D+++MG+V + +A G +LP+
Sbjct: 175 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 234
Query: 271 --DDTNYIQLLKQVQTKVVFPTEPNVSAECKTL--LSKIF 306
D + ++ K V + + P PN C+ L ++KI
Sbjct: 235 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 274
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 54/280 (19%)
Query: 67 VLGKVIGIGSYATVKLATSTRHGCDVAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNL 126
VL + IG G + V G +VAVK+ S E F EI LRH N+
Sbjct: 7 VLQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERS----WFREAEIYQTVMLRHENI 60
Query: 127 IRFLQAIE----TTHRVYIIMEYAEKGSLLDFIQR-----EGYIDEP-RTKKWFRQL-VD 175
+ F+ A T +++++ +Y E GSL D++ R EG I T L ++
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 176 AIDYCHERGVVHRDIKCENLLIDGEYNIKLSDFGFARGHMKCKSGHQSPLSDTF------ 229
+ + + HRD+K +N+L+ ++D G A H +DT
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH--------DSATDTIDIAPNH 172
Query: 230 -CGSYAYASPEILKGVPYTPHY-----SDVWSMGVVLYAMA----FG------RLPF--- 270
G+ Y +PE+L H+ +D+++MG+V + +A G +LP+
Sbjct: 173 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 232
Query: 271 --DDTNYIQLLKQVQTKVVFPTEPNVSAECKTL--LSKIF 306
D + ++ K V + + P PN C+ L ++KI
Sbjct: 233 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIM 272
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 52/237 (21%)
Query: 66 YVLGKVIGIGSYATVKLATSTRHGCDVAVKVVSK----VEAPPDYLKKFLPREID----- 116
Y+L + +G G ++TV LA + VA+K+V EA D + K L R D
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEI-KLLQRVNDADNTK 79
Query: 117 --------VVKGLRH-----PNLIRFLQAIETT--HRVYIIMEYAEKGSLLDFIQREGYI 161
++K L H PN + + E + + +I +Y +G L ++
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV------ 133
Query: 162 DEPRTKKWFRQLVDAIDYCHER-GVVHRDIKCENLL---IDGEYN---IKLSDFGFARGH 214
K+ +QL+ +DY H R G++H DIK EN+L +D N IK++D G A
Sbjct: 134 -----KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--- 185
Query: 215 MKCKSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGVVLYAMAFGRLPFD 271
C S + Y SPE+L G P+ +D+WS +++ + G F+
Sbjct: 186 --CWYDEHYTNS---IQTREYRSPEVLLGAPWGCG-ADIWSTACLIFELITGDFLFE 236
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 92 VAVKVVSKVEAPPDYLKKFLPREIDVVKGLRHPNLIRFLQAIETTHRVYIIMEYAEKGSL 151
VAVK V++ + + ++ FL E V+KG +++R L + ++ME G L
Sbjct: 47 VAVKTVNESASLRERIE-FL-NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 104
Query: 152 LDFIQR---EGYIDEPRTKKWFRQLV-------DAIDYCHERGVVHRDIKCENLLIDGEY 201
+++ E + R ++++ D + Y + + VHRD+ N ++ ++
Sbjct: 105 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF 164
Query: 202 NIKLSDFGFARGHMKC---KSGHQSPLSDTFCGSYAYASPEILKGVPYTPHYSDVWSMGV 258
+K+ DFG R + + G + L + +PE LK +T SD+WS GV
Sbjct: 165 TVKIGDFGMTRDIXETDXXRKGGKGLL------PVRWMAPESLKDGVFTTS-SDMWSFGV 217
Query: 259 VLYAM-AFGRLPFDDTNYIQLLKQV 282
VL+ + + P+ + Q+LK V
Sbjct: 218 VLWEITSLAEQPYQGLSNEQVLKFV 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,213,717
Number of Sequences: 62578
Number of extensions: 427191
Number of successful extensions: 3791
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 915
Number of HSP's gapped (non-prelim): 1175
length of query: 357
length of database: 14,973,337
effective HSP length: 100
effective length of query: 257
effective length of database: 8,715,537
effective search space: 2239893009
effective search space used: 2239893009
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)